Query psy17243
Match_columns 392
No_of_seqs 754 out of 2274
Neff 11.6
Searched_HMMs 29240
Date Fri Aug 16 16:59:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17243.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17243hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 1E-50 3.6E-55 380.6 31.1 381 4-390 37-558 (611)
2 1nr0_A Actin interacting prote 100.0 5.2E-49 1.8E-53 369.1 31.0 381 1-390 76-602 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 4E-48 1.4E-52 361.8 30.7 361 1-390 197-571 (577)
4 1vyh_C Platelet-activating fac 100.0 5.2E-46 1.8E-50 332.1 30.1 238 19-259 101-360 (410)
5 2ymu_A WD-40 repeat protein; u 100.0 5.7E-46 1.9E-50 347.2 31.2 361 1-390 33-448 (577)
6 1vyh_C Platelet-activating fac 100.0 5.8E-45 2E-49 325.3 34.0 251 1-255 125-398 (410)
7 3ow8_A WD repeat-containing pr 100.0 2.2E-45 7.4E-50 317.1 28.6 240 16-259 22-270 (321)
8 3ow8_A WD repeat-containing pr 100.0 1.9E-44 6.5E-49 311.2 31.6 256 1-260 53-313 (321)
9 3sfz_A APAF-1, apoptotic pepti 100.0 2.5E-45 8.5E-50 371.3 30.4 385 1-387 632-1197(1249)
10 2ynn_A Coatomer subunit beta'; 100.0 2.7E-43 9.4E-48 302.0 35.4 253 1-256 30-291 (304)
11 1got_B GT-beta; complex (GTP-b 100.0 4.2E-44 1.4E-48 312.0 30.8 238 16-258 45-291 (340)
12 3mkq_A Coatomer beta'-subunit; 100.0 4.3E-44 1.5E-48 347.7 31.9 376 1-386 30-486 (814)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.9E-44 1.3E-48 312.7 27.7 243 15-258 4-273 (345)
14 3frx_A Guanine nucleotide-bind 100.0 1.4E-43 4.9E-48 305.8 30.3 235 16-256 7-256 (319)
15 2ynn_A Coatomer subunit beta'; 100.0 1.7E-43 5.7E-48 303.3 30.0 243 16-260 3-251 (304)
16 3iz6_a 40S ribosomal protein R 100.0 1.3E-44 4.6E-49 319.9 23.4 309 7-356 47-377 (380)
17 2pbi_B Guanine nucleotide-bind 100.0 4.9E-43 1.7E-47 306.7 30.6 238 17-258 55-305 (354)
18 1got_B GT-beta; complex (GTP-b 100.0 7.2E-42 2.5E-46 297.9 37.0 251 1-256 72-331 (340)
19 4ery_A WD repeat-containing pr 100.0 2.4E-41 8.3E-46 291.3 36.4 253 1-255 40-297 (312)
20 4gqb_B Methylosome protein 50; 100.0 3.9E-43 1.3E-47 305.2 25.1 225 24-251 80-313 (344)
21 2pm9_A Protein WEB1, protein t 100.0 2.2E-43 7.4E-48 316.4 24.2 336 3-355 42-415 (416)
22 2hes_X YDR267CP; beta-propelle 100.0 2.3E-42 8E-47 299.6 28.6 240 14-256 2-268 (330)
23 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-42 3.9E-47 337.5 29.3 381 1-390 34-596 (902)
24 2xzm_R RACK1; ribosome, transl 100.0 1.5E-42 5.1E-47 302.7 27.0 237 16-256 11-274 (343)
25 4aow_A Guanine nucleotide-bind 100.0 6.3E-42 2.2E-46 298.5 29.6 239 14-256 26-275 (340)
26 4g56_B MGC81050 protein; prote 100.0 2.2E-43 7.6E-48 309.1 19.9 245 6-258 26-291 (357)
27 2pbi_B Guanine nucleotide-bind 100.0 1.1E-40 3.7E-45 291.8 36.0 252 1-256 81-345 (354)
28 3sfz_A APAF-1, apoptotic pepti 100.0 1.6E-41 5.4E-46 343.6 31.0 340 24-389 838-1239(1249)
29 1pgu_A Actin interacting prote 100.0 1.2E-41 4.2E-46 320.2 27.8 372 1-390 83-563 (615)
30 2pm9_A Protein WEB1, protein t 100.0 1.4E-42 4.9E-47 311.1 20.1 231 27-258 13-284 (416)
31 1erj_A Transcriptional repress 100.0 5.1E-40 1.7E-44 291.9 35.8 244 4-248 83-363 (393)
32 2oaj_A Protein SNI1; WD40 repe 100.0 8.3E-41 2.8E-45 324.5 32.6 361 23-390 14-510 (902)
33 3frx_A Guanine nucleotide-bind 100.0 6E-40 2.1E-44 283.1 34.6 250 1-256 35-305 (319)
34 4ery_A WD repeat-containing pr 100.0 2.4E-40 8.3E-45 285.0 31.3 240 16-259 13-259 (312)
35 3iz6_a 40S ribosomal protein R 100.0 6.7E-41 2.3E-45 296.2 27.6 253 1-256 83-363 (380)
36 2xzm_R RACK1; ribosome, transl 100.0 7.3E-40 2.5E-44 285.7 33.5 249 1-256 44-328 (343)
37 4gqb_B Methylosome protein 50; 100.0 3.9E-40 1.3E-44 286.3 31.5 225 1-229 98-334 (344)
38 1r5m_A SIR4-interacting protei 100.0 7.6E-41 2.6E-45 300.5 27.7 252 1-259 63-352 (425)
39 4g56_B MGC81050 protein; prote 100.0 1.6E-40 5.4E-45 291.0 28.7 248 5-255 69-330 (357)
40 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.6E-40 1.6E-44 287.0 31.4 253 1-255 33-322 (345)
41 1pgu_A Actin interacting prote 100.0 3E-41 1E-45 317.5 25.2 372 4-390 37-510 (615)
42 1r5m_A SIR4-interacting protei 100.0 1.2E-41 4.2E-46 305.7 20.9 333 7-390 26-416 (425)
43 3ei3_B DNA damage-binding prot 100.0 1.2E-40 4.1E-45 295.4 26.5 293 11-387 58-371 (383)
44 1erj_A Transcriptional repress 100.0 5.4E-40 1.9E-44 291.7 30.4 230 24-259 62-332 (393)
45 2hes_X YDR267CP; beta-propelle 100.0 1.8E-39 6.2E-44 281.5 31.6 252 1-255 29-315 (330)
46 4e54_B DNA damage-binding prot 100.0 8.9E-41 3.1E-45 300.9 22.9 293 16-389 109-421 (435)
47 3dm0_A Maltose-binding peripla 100.0 1.7E-40 5.9E-45 316.3 25.9 237 18-256 374-621 (694)
48 3mkq_A Coatomer beta'-subunit; 100.0 3.3E-40 1.1E-44 320.4 27.5 242 17-260 4-251 (814)
49 1k8k_C P40, ARP2/3 complex 41 100.0 1.2E-39 4.1E-44 287.7 26.7 233 22-255 4-262 (372)
50 3vl1_A 26S proteasome regulato 100.0 1.1E-39 3.9E-44 292.7 26.8 256 1-258 73-355 (420)
51 2pm7_B Protein transport prote 100.0 2.8E-38 9.5E-43 269.9 33.9 236 20-256 3-273 (297)
52 1gxr_A ESG1, transducin-like e 100.0 2E-40 6.9E-45 288.5 20.6 313 25-390 8-328 (337)
53 3v7d_B Cell division control p 100.0 1.2E-38 4.1E-43 289.7 31.4 226 1-233 137-388 (464)
54 1sq9_A Antiviral protein SKI8; 100.0 5.5E-39 1.9E-43 286.0 28.5 249 1-254 31-371 (397)
55 1gxr_A ESG1, transducin-like e 100.0 3.4E-39 1.2E-43 280.7 26.3 242 10-258 35-286 (337)
56 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-39 3.8E-44 290.3 22.3 299 1-388 32-350 (588)
57 3zwl_B Eukaryotic translation 100.0 1.2E-36 4.1E-41 268.0 39.4 307 18-356 24-348 (369)
58 3dwl_C Actin-related protein 2 100.0 3.8E-39 1.3E-43 285.1 22.1 236 21-258 6-272 (377)
59 1sq9_A Antiviral protein SKI8; 100.0 8.3E-39 2.8E-43 284.9 24.3 237 18-258 8-312 (397)
60 3gre_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 293.9 18.6 238 10-252 47-318 (437)
61 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.8E-38 3E-42 282.5 30.4 241 1-257 134-380 (445)
62 3dm0_A Maltose-binding peripla 100.0 2.2E-37 7.7E-42 294.8 34.6 230 1-236 400-642 (694)
63 3vl1_A 26S proteasome regulato 100.0 1.2E-37 4E-42 279.5 30.1 252 1-256 114-408 (420)
64 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.9E-38 1E-42 285.6 25.9 316 16-390 108-429 (445)
65 2j04_B YDR362CP, TAU91; beta p 100.0 5.4E-38 1.8E-42 286.1 26.1 246 1-252 178-458 (524)
66 3zwl_B Eukaryotic translation 100.0 1.4E-36 4.7E-41 267.6 33.9 253 1-258 49-336 (369)
67 3bg1_A Protein SEC13 homolog; 100.0 5.4E-38 1.8E-42 270.5 23.7 237 21-257 8-282 (316)
68 4gga_A P55CDC, cell division c 100.0 3.5E-36 1.2E-40 269.8 36.3 251 3-256 122-383 (420)
69 3odt_A Protein DOA1; ubiquitin 100.0 4.6E-37 1.6E-41 264.5 28.9 228 15-254 7-242 (313)
70 4aez_A CDC20, WD repeat-contai 100.0 3E-37 1E-41 275.0 28.2 286 24-358 89-384 (401)
71 3k26_A Polycomb protein EED; W 100.0 2.4E-37 8.2E-42 272.2 27.0 252 2-256 40-354 (366)
72 3i2n_A WD repeat-containing pr 100.0 8.6E-38 2.9E-42 274.2 23.2 236 20-258 12-281 (357)
73 3jrp_A Fusion protein of prote 100.0 1.2E-36 3.9E-41 269.1 29.9 242 16-258 1-277 (379)
74 3dw8_B Serine/threonine-protei 100.0 9.9E-38 3.4E-42 282.3 22.8 229 25-256 27-361 (447)
75 3i2n_A WD repeat-containing pr 100.0 4.2E-37 1.4E-41 269.8 26.1 245 5-253 43-337 (357)
76 4a11_B DNA excision repair pro 100.0 7.3E-37 2.5E-41 273.1 28.0 321 5-353 22-404 (408)
77 1k8k_C P40, ARP2/3 complex 41 100.0 3.6E-36 1.2E-40 265.4 31.8 224 1-226 25-274 (372)
78 3k26_A Polycomb protein EED; W 100.0 1.9E-38 6.6E-43 279.2 17.1 235 22-259 14-309 (366)
79 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-35 3.7E-40 255.9 33.3 243 1-254 34-283 (313)
80 4aow_A Guanine nucleotide-bind 100.0 3.1E-35 1.1E-39 256.2 36.4 249 1-255 56-324 (340)
81 2j04_B YDR362CP, TAU91; beta p 100.0 7.6E-38 2.6E-42 285.1 19.7 236 25-264 132-424 (524)
82 3ei3_B DNA damage-binding prot 100.0 6.1E-36 2.1E-40 265.1 30.6 251 1-256 91-371 (383)
83 4aez_A CDC20, WD repeat-contai 100.0 1.7E-35 6E-40 263.7 33.5 252 1-259 108-371 (401)
84 2aq5_A Coronin-1A; WD40 repeat 100.0 2.9E-36 1E-40 268.8 27.8 252 1-255 52-331 (402)
85 4ggc_A P55CDC, cell division c 100.0 1.2E-34 4.3E-39 249.9 36.2 250 3-255 42-302 (318)
86 3jro_A Fusion protein of prote 100.0 4.7E-36 1.6E-40 287.4 29.4 242 19-261 2-278 (753)
87 4gga_A P55CDC, cell division c 100.0 8.7E-36 3E-40 267.2 28.6 281 28-357 107-398 (420)
88 4e54_B DNA damage-binding prot 100.0 3.1E-36 1.1E-40 271.2 25.7 255 1-256 137-419 (435)
89 3v7d_B Cell division control p 100.0 2.2E-35 7.7E-40 268.2 30.9 316 18-391 113-454 (464)
90 1yfq_A Cell cycle arrest prote 100.0 1.5E-35 5.1E-40 258.4 28.4 252 1-260 28-315 (342)
91 1p22_A F-BOX/WD-repeat protein 100.0 8.1E-36 2.8E-40 268.7 27.2 223 23-258 130-355 (435)
92 3mmy_A MRNA export factor; mRN 100.0 1.8E-35 6E-40 260.4 28.3 256 1-259 59-337 (368)
93 2pm7_B Protein transport prote 100.0 2.1E-35 7.3E-40 252.0 28.0 225 1-226 26-285 (297)
94 3dw8_B Serine/threonine-protei 100.0 2.6E-35 9E-40 266.4 29.0 252 1-256 45-435 (447)
95 3bg1_A Protein SEC13 homolog; 100.0 3.6E-36 1.2E-40 259.1 21.7 224 1-225 30-292 (316)
96 3f3f_A Nucleoporin SEH1; struc 100.0 2.2E-34 7.4E-39 251.4 32.6 295 19-323 4-336 (351)
97 4ggc_A P55CDC, cell division c 100.0 9.1E-35 3.1E-39 250.8 28.2 278 29-355 28-316 (318)
98 3dwl_C Actin-related protein 2 100.0 2.9E-36 9.9E-41 266.6 18.6 222 1-225 28-280 (377)
99 1p22_A F-BOX/WD-repeat protein 100.0 1.9E-34 6.5E-39 259.7 30.3 242 1-258 148-404 (435)
100 3gre_A Serine/threonine-protei 100.0 5.7E-35 1.9E-39 263.5 26.4 295 1-321 81-437 (437)
101 3mmy_A MRNA export factor; mRN 100.0 8.9E-35 3E-39 255.9 26.5 299 8-389 21-336 (368)
102 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-34 5.3E-39 257.7 25.8 272 28-388 36-333 (402)
103 3f3f_A Nucleoporin SEH1; struc 100.0 4E-34 1.4E-38 249.7 27.3 231 1-233 28-344 (351)
104 4h5i_A Guanine nucleotide-exch 100.0 3.1E-34 1.1E-38 251.7 26.4 247 5-256 42-331 (365)
105 2xyi_A Probable histone-bindin 100.0 6.6E-34 2.3E-38 255.6 28.9 239 20-258 122-400 (430)
106 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-34 4.4E-39 253.4 23.5 235 10-259 3-262 (355)
107 4h5i_A Guanine nucleotide-exch 100.0 1.1E-33 3.7E-38 248.3 28.0 223 2-227 100-344 (365)
108 1l0q_A Surface layer protein; 100.0 1.2E-32 4.1E-37 244.6 34.5 247 1-256 7-263 (391)
109 1yfq_A Cell cycle arrest prote 100.0 1.5E-33 5E-38 245.8 27.9 232 20-259 5-273 (342)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7.2E-33 2.4E-37 250.5 33.1 227 25-256 101-373 (450)
111 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-33 4.1E-38 255.6 26.3 208 26-236 4-281 (450)
112 3jrp_A Fusion protein of prote 100.0 4.8E-33 1.7E-37 245.9 26.4 228 1-229 28-290 (379)
113 3bws_A Protein LP49; two-domai 100.0 8.1E-33 2.8E-37 249.1 25.8 304 3-388 96-420 (433)
114 3lrv_A PRE-mRNA-splicing facto 100.0 6.2E-33 2.1E-37 241.9 22.9 243 1-255 53-320 (343)
115 4gq1_A NUP37; propeller, trans 100.0 1.2E-32 4.1E-37 244.3 22.5 223 35-257 98-379 (393)
116 4a11_B DNA excision repair pro 100.0 2.8E-31 9.4E-36 237.0 30.8 232 1-234 61-373 (408)
117 2xyi_A Probable histone-bindin 100.0 2.3E-31 7.9E-36 239.1 29.2 225 1-227 146-411 (430)
118 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-31 3.9E-36 239.0 26.3 241 5-256 63-349 (588)
119 3lrv_A PRE-mRNA-splicing facto 100.0 6.4E-32 2.2E-36 235.5 21.5 214 33-256 43-279 (343)
120 3jro_A Fusion protein of prote 100.0 9.1E-32 3.1E-36 257.7 22.0 226 1-227 26-286 (753)
121 3bws_A Protein LP49; two-domai 100.0 1.3E-29 4.6E-34 228.1 34.1 247 2-255 140-418 (433)
122 2w18_A PALB2, fancn, partner a 100.0 1.4E-30 5E-35 218.1 23.8 218 4-224 61-355 (356)
123 1nir_A Nitrite reductase; hemo 100.0 4.5E-30 1.6E-34 235.8 29.0 341 2-384 155-535 (543)
124 3vu4_A KMHSV2; beta-propeller 100.0 3.2E-29 1.1E-33 219.2 32.6 244 5-257 39-325 (355)
125 4gq1_A NUP37; propeller, trans 100.0 4.2E-31 1.4E-35 234.4 20.8 222 1-224 106-387 (393)
126 1l0q_A Surface layer protein; 100.0 4.2E-28 1.5E-32 215.3 35.0 232 2-240 50-289 (391)
127 2w18_A PALB2, fancn, partner a 100.0 1.2E-27 4.2E-32 200.4 26.5 238 15-256 24-345 (356)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.2E-26 7.4E-31 205.3 31.2 234 6-249 159-409 (415)
129 2ojh_A Uncharacterized protein 100.0 5.2E-27 1.8E-31 199.8 24.6 251 2-257 18-291 (297)
130 2ecf_A Dipeptidyl peptidase IV 100.0 7E-28 2.4E-32 231.4 19.4 308 26-386 36-442 (741)
131 1xfd_A DIP, dipeptidyl aminope 100.0 3.6E-28 1.2E-32 232.9 16.2 317 27-385 17-426 (723)
132 1nir_A Nitrite reductase; hemo 100.0 1.1E-26 3.6E-31 213.4 25.0 310 33-385 144-495 (543)
133 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.7E-26 9.3E-31 204.6 27.0 241 7-256 94-372 (415)
134 1k32_A Tricorn protease; prote 100.0 9.2E-27 3.2E-31 231.1 23.0 352 5-388 32-440 (1045)
135 3u4y_A Uncharacterized protein 99.9 7E-25 2.4E-29 190.0 27.7 251 2-255 16-290 (331)
136 2ecf_A Dipeptidyl peptidase IV 99.9 1.2E-25 4E-30 216.0 24.8 243 7-255 65-397 (741)
137 3vgz_A Uncharacterized protein 99.9 5.2E-24 1.8E-28 186.2 32.5 248 5-256 68-332 (353)
138 1k32_A Tricorn protease; prote 99.9 1.9E-25 6.6E-30 221.6 26.0 245 2-257 220-491 (1045)
139 1ri6_A Putative isomerase YBHE 99.9 1.1E-24 3.6E-29 189.7 26.5 252 2-256 11-295 (343)
140 2z3z_A Dipeptidyl aminopeptida 99.9 6E-26 2.1E-30 216.8 19.7 246 3-255 42-373 (706)
141 2ojh_A Uncharacterized protein 99.9 4.7E-25 1.6E-29 187.6 21.3 207 43-255 17-234 (297)
142 3vgz_A Uncharacterized protein 99.9 1.9E-24 6.6E-29 188.9 25.0 206 25-234 39-270 (353)
143 3u4y_A Uncharacterized protein 99.9 2E-24 6.8E-29 187.1 24.4 217 33-255 4-238 (331)
144 1ri6_A Putative isomerase YBHE 99.9 2.2E-24 7.6E-29 187.6 20.3 297 40-382 7-336 (343)
145 3hfq_A Uncharacterized protein 99.9 1.2E-22 4.2E-27 177.1 28.7 252 3-256 13-304 (347)
146 1z68_A Fibroblast activation p 99.9 4.6E-25 1.6E-29 211.1 10.6 220 30-254 19-328 (719)
147 1pby_B Quinohemoprotein amine 99.9 1.8E-22 6.3E-27 175.0 26.0 231 1-237 6-321 (337)
148 2z3z_A Dipeptidyl aminopeptida 99.9 1.1E-22 3.7E-27 194.4 25.5 248 4-256 99-419 (706)
149 1xfd_A DIP, dipeptidyl aminope 99.9 7.5E-23 2.6E-27 196.0 23.9 252 3-256 34-378 (723)
150 3scy_A Hypothetical bacterial 99.9 4.9E-21 1.7E-25 167.9 31.6 251 2-256 23-324 (361)
151 1z68_A Fibroblast activation p 99.9 3.6E-23 1.2E-27 198.0 15.6 249 3-255 33-373 (719)
152 1pby_B Quinohemoprotein amine 99.9 2.6E-22 8.9E-27 174.1 19.1 266 39-358 2-314 (337)
153 1jmx_B Amine dehydrogenase; ox 99.9 3.3E-21 1.1E-25 168.0 24.6 228 2-236 17-335 (349)
154 2oit_A Nucleoporin 214KDA; NH2 99.9 4.4E-22 1.5E-26 178.0 17.8 195 26-227 36-279 (434)
155 3pe7_A Oligogalacturonate lyas 99.9 1E-21 3.4E-26 174.0 19.5 215 10-229 14-276 (388)
156 3o4h_A Acylamino-acid-releasin 99.9 3.6E-21 1.2E-25 179.6 22.0 237 4-256 42-300 (582)
157 3hfq_A Uncharacterized protein 99.9 7.2E-20 2.4E-24 159.5 28.7 226 4-230 61-323 (347)
158 2oit_A Nucleoporin 214KDA; NH2 99.9 3.7E-21 1.3E-25 172.0 19.0 198 48-255 23-258 (434)
159 2oiz_A Aromatic amine dehydrog 99.9 1.4E-19 4.9E-24 158.0 28.2 241 4-250 29-360 (361)
160 1jmx_B Amine dehydrogenase; ox 99.9 6.6E-20 2.3E-24 159.7 23.6 218 31-255 4-312 (349)
161 3o4h_A Acylamino-acid-releasin 99.9 2.3E-20 7.8E-25 174.2 19.6 223 25-258 20-266 (582)
162 4a5s_A Dipeptidyl peptidase 4 99.9 1.3E-20 4.6E-25 180.4 18.2 224 26-255 16-337 (740)
163 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.2E-19 1.4E-23 155.7 23.8 249 6-256 14-328 (365)
164 3scy_A Hypothetical bacterial 99.8 6.7E-18 2.3E-22 147.9 29.2 238 5-246 74-360 (361)
165 3pe7_A Oligogalacturonate lyas 99.8 2.8E-18 9.6E-23 151.8 24.2 245 7-256 61-369 (388)
166 3fvz_A Peptidyl-glycine alpha- 99.8 3.8E-17 1.3E-21 141.0 29.2 230 26-258 23-312 (329)
167 1jof_A Carboxy-CIS,CIS-muconat 99.8 9.1E-18 3.1E-22 147.2 24.8 221 7-227 61-342 (365)
168 3azo_A Aminopeptidase; POP fam 99.8 1E-17 3.4E-22 158.8 24.8 249 3-254 44-353 (662)
169 4a5s_A Dipeptidyl peptidase 4 99.8 8.1E-18 2.8E-22 161.2 23.9 247 5-256 35-382 (740)
170 2dg1_A DRP35, lactonase; beta 99.8 3.1E-16 1E-20 135.7 31.1 242 3-254 24-296 (333)
171 2gop_A Trilobed protease; beta 99.8 5.9E-17 2E-21 141.0 25.6 228 4-255 41-317 (347)
172 3e5z_A Putative gluconolactona 99.8 3.4E-16 1.2E-20 133.0 29.6 228 16-255 17-274 (296)
173 3c5m_A Oligogalacturonate lyas 99.8 2.7E-18 9.4E-23 152.2 17.2 239 9-256 13-301 (396)
174 1q7f_A NHL, brain tumor CG1071 99.8 7.5E-16 2.6E-20 130.2 29.7 224 24-255 27-268 (286)
175 3c5m_A Oligogalacturonate lyas 99.8 1.5E-17 5.1E-22 147.4 19.6 245 5-256 59-369 (396)
176 3no2_A Uncharacterized protein 99.8 7.3E-16 2.5E-20 128.9 27.7 225 1-235 10-261 (276)
177 1qks_A Cytochrome CD1 nitrite 99.8 3E-15 1E-19 137.3 33.2 248 3-256 174-458 (567)
178 3fvz_A Peptidyl-glycine alpha- 99.8 2.5E-16 8.6E-21 135.9 24.3 219 5-226 68-322 (329)
179 2xdw_A Prolyl endopeptidase; a 99.8 1.2E-15 4E-20 145.6 30.9 226 25-253 123-395 (710)
180 1q7f_A NHL, brain tumor CG1071 99.8 1.9E-15 6.3E-20 127.8 28.9 216 3-228 48-282 (286)
181 3azo_A Aminopeptidase; POP fam 99.8 6.1E-16 2.1E-20 146.6 28.3 238 19-257 16-313 (662)
182 3no2_A Uncharacterized protein 99.7 1.5E-15 5.1E-20 127.0 25.0 213 37-256 4-231 (276)
183 3dsm_A Uncharacterized protein 99.7 9.6E-16 3.3E-20 132.0 22.6 223 4-234 62-309 (328)
184 3dsm_A Uncharacterized protein 99.7 9E-15 3.1E-19 126.0 28.6 242 2-255 13-285 (328)
185 3sjl_D Methylamine dehydrogena 99.7 3.2E-15 1.1E-19 128.8 22.8 246 5-254 58-348 (386)
186 3e5z_A Putative gluconolactona 99.7 8.4E-15 2.9E-19 124.4 25.4 220 2-229 46-289 (296)
187 1rwi_B Serine/threonine-protei 99.7 5.7E-15 1.9E-19 123.6 23.9 224 28-256 25-252 (270)
188 2bkl_A Prolyl endopeptidase; m 99.7 6.2E-15 2.1E-19 140.2 23.9 222 24-253 118-378 (695)
189 1rwi_B Serine/threonine-protei 99.7 1.6E-14 5.4E-19 120.9 23.7 221 3-229 43-267 (270)
190 2xdw_A Prolyl endopeptidase; a 99.7 3.3E-14 1.1E-18 135.6 28.6 221 5-228 150-416 (710)
191 2mad_H Methylamine dehydrogena 99.7 5E-13 1.7E-17 116.7 31.6 243 7-255 48-336 (373)
192 2gop_A Trilobed protease; beta 99.7 2.7E-14 9.1E-19 124.2 23.0 212 7-238 86-341 (347)
193 2z2n_A Virginiamycin B lyase; 99.7 1.3E-12 4.5E-17 110.8 32.9 241 5-255 35-283 (299)
194 1qks_A Cytochrome CD1 nitrite 99.7 1E-13 3.4E-18 127.2 26.8 199 36-235 165-382 (567)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 5.5E-13 1.9E-17 114.1 29.9 223 25-255 16-286 (314)
196 2dg1_A DRP35, lactonase; beta 99.6 3.6E-13 1.2E-17 116.3 28.7 213 2-216 62-300 (333)
197 3g4e_A Regucalcin; six bladed 99.6 2.2E-12 7.6E-17 109.4 30.6 223 25-255 11-259 (297)
198 2z2n_A Virginiamycin B lyase; 99.6 3.2E-12 1.1E-16 108.3 31.6 226 24-256 12-243 (299)
199 2bkl_A Prolyl endopeptidase; m 99.6 6.5E-14 2.2E-18 133.2 23.2 225 2-229 143-400 (695)
200 2oiz_A Aromatic amine dehydrog 99.6 2.2E-13 7.6E-18 118.8 24.1 195 4-206 79-359 (361)
201 2qc5_A Streptogramin B lactona 99.6 5.3E-12 1.8E-16 107.1 32.2 243 4-255 39-289 (300)
202 3hrp_A Uncharacterized protein 99.6 1.3E-12 4.4E-17 115.7 28.8 226 27-258 131-400 (409)
203 1yr2_A Prolyl oligopeptidase; 99.6 5.6E-13 1.9E-17 127.7 28.0 223 25-253 161-422 (741)
204 3c75_H MADH, methylamine dehyd 99.6 3.1E-13 1.1E-17 118.6 23.9 224 6-233 99-409 (426)
205 3sjl_D Methylamine dehydrogena 99.6 1.2E-12 4.1E-17 112.8 24.9 239 4-248 107-384 (386)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.6E-12 5.5E-17 111.2 25.6 221 2-226 42-299 (314)
207 1xip_A Nucleoporin NUP159; bet 99.6 1.3E-12 4.4E-17 113.1 24.0 172 70-258 39-234 (388)
208 2mad_H Methylamine dehydrogena 99.6 2.3E-11 7.9E-16 106.1 31.5 223 4-233 95-357 (373)
209 1mda_H Methylamine dehydrogena 99.5 3.1E-13 1E-17 116.8 17.9 234 7-246 47-365 (368)
210 3g4e_A Regucalcin; six bladed 99.5 1.9E-11 6.5E-16 103.6 27.2 208 4-215 33-262 (297)
211 2ghs_A AGR_C_1268P; regucalcin 99.5 7.2E-11 2.5E-15 101.4 31.1 214 29-254 51-288 (326)
212 2qc5_A Streptogramin B lactona 99.5 1.2E-10 4E-15 98.7 31.9 224 25-256 18-248 (300)
213 1xip_A Nucleoporin NUP159; bet 99.5 6.3E-13 2.2E-17 115.1 17.1 168 27-212 38-230 (388)
214 1yr2_A Prolyl oligopeptidase; 99.5 6.7E-12 2.3E-16 120.2 24.8 219 6-229 189-444 (741)
215 3dr2_A Exported gluconolactona 99.5 5.5E-11 1.9E-15 101.2 27.5 225 18-255 36-294 (305)
216 3hrp_A Uncharacterized protein 99.5 4.8E-11 1.6E-15 105.6 27.3 212 4-224 150-408 (409)
217 1yiq_A Quinohemoprotein alcoho 99.5 1.8E-11 6.1E-16 115.5 24.4 250 2-254 127-534 (689)
218 2qe8_A Uncharacterized protein 99.4 3.2E-11 1.1E-15 104.4 23.1 228 27-256 17-309 (343)
219 1kb0_A Quinohemoprotein alcoho 99.4 1.9E-11 6.5E-16 115.1 22.6 250 2-254 134-536 (677)
220 2ghs_A AGR_C_1268P; regucalcin 99.4 4.1E-10 1.4E-14 96.7 29.0 207 3-216 68-293 (326)
221 3iuj_A Prolyl endopeptidase; h 99.4 2.9E-11 9.9E-16 114.8 23.6 224 24-255 126-388 (693)
222 2hz6_A Endoplasmic reticulum t 99.4 1.3E-13 4.5E-18 120.5 6.0 202 37-251 8-217 (369)
223 3dr2_A Exported gluconolactona 99.4 5.5E-11 1.9E-15 101.2 21.2 212 3-223 64-303 (305)
224 2iwa_A Glutamine cyclotransfer 99.4 3.4E-10 1.2E-14 92.4 23.9 208 16-227 9-238 (266)
225 1npe_A Nidogen, entactin; glyc 99.3 1E-08 3.4E-13 85.3 31.3 240 5-250 9-263 (267)
226 2hz6_A Endoplasmic reticulum t 99.3 3.5E-13 1.2E-17 117.8 3.7 188 2-199 15-207 (369)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.3 4.4E-10 1.5E-14 98.7 23.4 239 2-254 109-365 (376)
228 3iuj_A Prolyl endopeptidase; h 99.3 4E-10 1.4E-14 107.0 24.7 221 2-229 151-408 (693)
229 3nol_A Glutamine cyclotransfer 99.3 8.6E-10 3E-14 88.9 22.2 194 17-214 32-244 (262)
230 1fwx_A Nitrous oxide reductase 99.3 3.8E-10 1.3E-14 101.5 21.7 254 1-257 20-407 (595)
231 3c75_H MADH, methylamine dehyd 99.3 5.8E-10 2E-14 98.0 22.4 217 36-255 82-388 (426)
232 2ece_A 462AA long hypothetical 99.3 1.5E-09 5.1E-14 94.4 24.3 211 2-214 102-399 (462)
233 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1E-08 3.6E-13 89.8 29.9 221 2-234 59-304 (376)
234 2ece_A 462AA long hypothetical 99.3 1E-08 3.4E-13 89.2 27.8 217 36-256 93-399 (462)
235 3nok_A Glutaminyl cyclase; bet 99.3 1.4E-09 4.7E-14 87.7 20.1 192 17-214 44-254 (268)
236 2qe8_A Uncharacterized protein 99.3 1.2E-09 4E-14 94.6 21.3 197 24-222 64-317 (343)
237 3mbr_X Glutamine cyclotransfer 99.2 1.4E-08 4.9E-13 81.1 23.6 192 17-214 10-223 (243)
238 3hxj_A Pyrrolo-quinoline quino 99.2 3.2E-09 1.1E-13 91.3 21.4 231 8-256 80-313 (330)
239 1kv9_A Type II quinohemoprotei 99.2 5.4E-09 1.8E-13 98.4 21.8 249 2-253 123-516 (668)
240 1kb0_A Quinohemoprotein alcoho 99.1 1.4E-08 4.9E-13 95.6 23.8 205 4-212 188-537 (677)
241 1yiq_A Quinohemoprotein alcoho 99.1 1.1E-08 3.9E-13 96.5 22.9 207 4-214 181-537 (689)
242 3hxj_A Pyrrolo-quinoline quino 99.1 1.6E-09 5.5E-14 93.1 15.6 234 2-255 36-272 (330)
243 1mda_H Methylamine dehydrogena 99.1 4.2E-09 1.4E-13 91.0 17.2 199 49-254 47-330 (368)
244 2ad6_A Methanol dehydrogenase 99.1 2.8E-08 9.6E-13 91.6 22.9 250 2-255 121-524 (571)
245 1w6s_A Methanol dehydrogenase 99.0 6.1E-08 2.1E-12 89.4 22.8 249 2-254 127-532 (599)
246 1fwx_A Nitrous oxide reductase 99.0 3.5E-08 1.2E-12 89.0 20.3 223 4-228 110-433 (595)
247 2iwa_A Glutamine cyclotransfer 99.0 1.5E-07 5.2E-12 76.8 22.3 187 59-255 10-223 (266)
248 3nol_A Glutamine cyclotransfer 99.0 5.4E-08 1.8E-12 78.5 18.5 186 59-254 32-241 (262)
249 1flg_A Protein (quinoprotein e 99.0 1E-07 3.4E-12 88.1 22.8 251 2-254 123-545 (582)
250 1npe_A Nidogen, entactin; glyc 99.0 2.7E-06 9.4E-11 70.4 28.9 211 39-256 2-226 (267)
251 2fp8_A Strictosidine synthase; 99.0 7.3E-07 2.5E-11 76.2 25.6 216 3-226 37-313 (322)
252 2fp8_A Strictosidine synthase; 98.9 9.3E-07 3.2E-11 75.5 25.3 221 27-256 19-301 (322)
253 2p4o_A Hypothetical protein; p 98.9 6.3E-06 2.1E-10 69.8 30.0 233 16-256 22-277 (306)
254 3v65_B Low-density lipoprotein 98.9 4.9E-06 1.7E-10 72.9 30.0 234 5-244 95-336 (386)
255 1ijq_A LDL receptor, low-densi 98.9 1.4E-05 4.8E-10 67.9 32.0 223 5-234 9-246 (316)
256 3v64_C Agrin; beta propeller, 98.9 1.2E-05 4.2E-10 69.3 31.5 224 6-235 53-284 (349)
257 3p5b_L Low density lipoprotein 98.9 1.8E-05 6E-10 69.7 32.5 234 5-244 91-338 (400)
258 4a2l_A BT_4663, two-component 98.9 8.1E-06 2.8E-10 78.9 32.3 246 3-255 232-515 (795)
259 3nok_A Glutaminyl cyclase; bet 98.9 2.5E-07 8.4E-12 74.6 17.0 164 2-172 71-254 (268)
260 3qqz_A Putative uncharacterize 98.8 7.9E-06 2.7E-10 66.3 25.5 191 63-255 21-241 (255)
261 4a2l_A BT_4663, two-component 98.8 2.2E-05 7.6E-10 75.8 32.9 244 2-255 326-603 (795)
262 3mbr_X Glutamine cyclotransfer 98.8 6.9E-06 2.4E-10 65.7 23.7 187 59-255 10-222 (243)
263 3sov_A LRP-6, low-density lipo 98.8 1.9E-05 6.5E-10 67.0 28.0 226 5-235 12-247 (318)
264 3v64_C Agrin; beta propeller, 98.7 8.7E-05 3E-09 63.9 31.2 223 26-256 33-263 (349)
265 3qqz_A Putative uncharacterize 98.7 5.4E-05 1.8E-09 61.4 27.3 200 21-224 21-251 (255)
266 1kv9_A Type II quinohemoprotei 98.7 2.2E-06 7.5E-11 80.7 21.9 186 4-193 176-498 (668)
267 1k3i_A Galactose oxidase precu 98.7 9.1E-07 3.1E-11 83.4 19.2 250 7-257 220-530 (656)
268 2ad6_A Methanol dehydrogenase 98.7 4.2E-06 1.4E-10 77.2 23.1 182 5-191 72-343 (571)
269 3v65_B Low-density lipoprotein 98.7 0.0001 3.5E-09 64.4 30.8 221 29-256 79-306 (386)
270 3v9f_A Two-component system se 98.6 4.5E-05 1.6E-09 73.5 29.0 243 7-256 231-513 (781)
271 2xe4_A Oligopeptidase B; hydro 98.6 5.9E-06 2E-10 79.1 21.8 193 28-224 175-398 (751)
272 3m0c_C LDL receptor, low-densi 98.6 0.00015 5E-09 69.2 30.6 223 6-234 404-640 (791)
273 1w6s_A Methanol dehydrogenase 98.6 1.8E-05 6.3E-10 73.0 23.8 182 5-191 72-350 (599)
274 3tc9_A Hypothetical hydrolase; 98.6 5.2E-05 1.8E-09 67.3 25.9 224 28-256 138-418 (430)
275 3amr_A 3-phytase; beta-propell 98.6 6.9E-05 2.4E-09 63.2 24.9 193 38-234 40-272 (355)
276 3v9f_A Two-component system se 98.6 0.00039 1.3E-08 67.0 33.6 243 2-256 329-601 (781)
277 2xe4_A Oligopeptidase B; hydro 98.6 6.8E-06 2.3E-10 78.6 20.2 156 70-226 175-354 (751)
278 1flg_A Protein (quinoprotein e 98.6 4E-05 1.4E-09 70.8 24.5 161 48-213 291-547 (582)
279 1ijq_A LDL receptor, low-densi 98.5 0.00029 9.9E-09 59.8 31.1 209 40-256 3-226 (316)
280 2p4o_A Hypothetical protein; p 98.5 8E-05 2.7E-09 62.9 24.2 204 5-214 52-277 (306)
281 4hw6_A Hypothetical protein, I 98.5 5E-05 1.7E-09 67.4 23.3 216 6-225 162-432 (433)
282 3sov_A LRP-6, low-density lipo 98.5 0.0004 1.4E-08 58.9 28.6 210 40-255 6-225 (318)
283 4hw6_A Hypothetical protein, I 98.5 0.00015 5.2E-09 64.3 25.6 223 28-256 140-421 (433)
284 3p5b_L Low density lipoprotein 98.5 0.00055 1.9E-08 60.1 30.2 210 40-255 85-307 (400)
285 3tc9_A Hypothetical hydrolase; 98.4 0.00021 7.2E-09 63.4 25.4 216 6-225 159-429 (430)
286 1k3i_A Galactose oxidase precu 98.4 1.5E-05 5.2E-10 75.1 18.6 223 31-257 190-475 (656)
287 1n7d_A LDL receptor, low-densi 98.4 4E-06 1.4E-10 79.2 14.5 224 6-235 386-623 (699)
288 3m0c_C LDL receptor, low-densi 98.4 0.00087 3E-08 64.0 28.7 211 40-256 397-620 (791)
289 3s94_A LRP-6, low-density lipo 98.3 0.0012 4E-08 61.5 28.7 224 5-233 17-250 (619)
290 3amr_A 3-phytase; beta-propell 98.3 0.00055 1.9E-08 57.8 22.7 182 5-190 49-271 (355)
291 3kya_A Putative phosphatase; s 98.3 0.0019 6.6E-08 57.6 27.5 226 29-257 141-464 (496)
292 2p9w_A MAL S 1 allergenic prot 98.3 0.0005 1.7E-08 57.5 22.1 198 25-226 11-265 (334)
293 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0031 1.1E-07 58.7 33.6 222 4-232 13-243 (628)
294 2ism_A Putative oxidoreductase 98.2 0.0022 7.6E-08 55.2 28.4 225 26-257 30-334 (352)
295 3kya_A Putative phosphatase; s 98.1 0.0053 1.8E-07 54.9 25.5 223 6-231 162-480 (496)
296 3s94_A LRP-6, low-density lipo 98.0 0.006 2.1E-07 56.7 26.7 206 46-255 16-230 (619)
297 2vpj_A Kelch-like protein 12; 97.9 0.0026 9E-08 53.3 20.9 214 6-228 31-280 (301)
298 3a9g_A Putative uncharacterize 97.9 0.0092 3.2E-07 51.3 26.8 228 26-256 28-330 (354)
299 2p9w_A MAL S 1 allergenic prot 97.9 0.0055 1.9E-07 51.3 21.0 134 4-137 33-214 (334)
300 1n7d_A LDL receptor, low-densi 97.9 0.00016 5.5E-09 68.4 13.5 177 47-227 385-572 (699)
301 2xn4_A Kelch-like protein 2; s 97.9 0.005 1.7E-07 51.6 21.1 214 6-228 30-278 (302)
302 3ii7_A Kelch-like protein 7; p 97.9 0.0034 1.2E-07 52.8 20.0 213 6-228 24-274 (306)
303 2xzh_A Clathrin heavy chain 1; 97.8 0.0095 3.2E-07 49.5 28.4 221 5-230 86-336 (365)
304 2xzh_A Clathrin heavy chain 1; 97.6 0.02 6.8E-07 47.6 29.5 225 5-241 48-305 (365)
305 1zgk_A Kelch-like ECH-associat 97.6 0.011 3.8E-07 49.7 19.5 214 6-228 39-289 (308)
306 1bpo_A Protein (clathrin); cla 97.6 0.029 9.8E-07 48.7 28.9 221 5-230 85-335 (494)
307 2xbg_A YCF48-like protein; pho 97.6 0.027 9.1E-07 47.8 28.5 216 26-256 35-268 (327)
308 2vpj_A Kelch-like protein 12; 97.6 0.016 5.5E-07 48.4 20.0 211 37-256 14-261 (301)
309 2xbg_A YCF48-like protein; pho 97.6 0.029 9.9E-07 47.6 26.3 219 26-256 79-311 (327)
310 4asc_A Kelch repeat and BTB do 97.5 0.025 8.4E-07 47.7 20.7 216 6-228 13-279 (315)
311 3pbp_A Nucleoporin NUP82; beta 97.5 0.016 5.3E-07 50.2 18.0 142 35-179 29-208 (452)
312 4a0p_A LRP6, LRP-6, low-densit 97.5 0.071 2.4E-06 49.7 31.1 203 27-235 340-558 (628)
313 2be1_A Serine/threonine-protei 97.4 0.0033 1.1E-07 53.2 13.5 184 2-188 16-236 (339)
314 2uvk_A YJHT; unknown function, 97.4 0.032 1.1E-06 47.9 20.0 193 37-233 65-349 (357)
315 3ei3_A DNA damage-binding prot 97.4 0.068 2.3E-06 53.5 24.2 174 6-183 807-999 (1158)
316 3das_A Putative oxidoreductase 97.3 0.06 2.1E-06 45.8 31.3 233 21-256 26-326 (347)
317 1zgk_A Kelch-like ECH-associat 97.3 0.039 1.3E-06 46.3 19.1 211 37-256 24-270 (308)
318 3ii7_A Kelch-like protein 7; p 97.3 0.055 1.9E-06 45.3 19.9 209 39-256 13-255 (306)
319 2xn4_A Kelch-like protein 2; s 97.3 0.044 1.5E-06 45.8 19.3 184 38-228 16-231 (302)
320 1bpo_A Protein (clathrin); cla 97.3 0.073 2.5E-06 46.2 30.0 227 4-242 46-305 (494)
321 3sre_A PON1, serum paraoxonase 97.3 0.067 2.3E-06 45.7 20.9 181 71-255 52-284 (355)
322 2g8s_A Glucose/sorbosone dehyd 97.3 0.074 2.5E-06 45.6 25.3 226 27-255 18-340 (353)
323 3ott_A Two-component system se 97.2 0.17 5.7E-06 48.5 29.4 218 26-255 62-296 (758)
324 3sre_A PON1, serum paraoxonase 97.2 0.084 2.9E-06 45.1 25.3 178 4-182 81-297 (355)
325 2woz_A Kelch repeat and BTB do 97.2 0.083 2.8E-06 44.5 20.5 214 7-228 25-289 (318)
326 2ism_A Putative oxidoreductase 97.0 0.14 4.7E-06 43.9 23.0 185 26-213 74-332 (352)
327 1tl2_A L10, protein (tachylect 96.9 0.036 1.2E-06 43.3 13.6 101 27-133 41-158 (236)
328 3pbp_A Nucleoporin NUP82; beta 96.9 0.069 2.4E-06 46.3 16.1 131 4-135 39-209 (452)
329 4asc_A Kelch repeat and BTB do 96.7 0.23 7.7E-06 41.7 21.1 182 40-228 7-223 (315)
330 1xi4_A Clathrin heavy chain; a 96.6 0.12 4.1E-06 52.0 17.4 221 5-229 85-334 (1630)
331 1xi4_A Clathrin heavy chain; a 96.6 0.25 8.4E-06 49.8 19.5 218 4-233 46-296 (1630)
332 3sbq_A Nitrous-oxide reductase 96.6 0.39 1.3E-05 43.2 22.3 255 1-257 75-454 (638)
333 2zwa_A Leucine carboxyl methyl 96.5 0.61 2.1E-05 44.1 21.7 193 36-229 396-638 (695)
334 3ei3_A DNA damage-binding prot 96.4 0.97 3.3E-05 45.4 30.8 239 7-253 493-752 (1158)
335 3s25_A Hypothetical 7-bladed b 96.3 0.39 1.3E-05 40.0 22.0 196 36-255 23-240 (302)
336 2be1_A Serine/threonine-protei 96.2 0.086 3E-06 44.6 12.6 189 39-231 11-236 (339)
337 2woz_A Kelch repeat and BTB do 96.1 0.53 1.8E-05 39.5 19.7 182 40-228 18-233 (318)
338 3qhy_B Beta-lactamase inhibito 96.1 0.49 1.7E-05 39.0 21.0 229 5-256 41-272 (282)
339 2uvk_A YJHT; unknown function, 95.8 0.48 1.6E-05 40.5 15.8 91 37-128 19-128 (357)
340 3a9g_A Putative uncharacterize 95.8 0.81 2.8E-05 39.1 22.5 207 5-213 48-329 (354)
341 1cru_A Protein (soluble quinop 95.7 1 3.5E-05 40.0 18.2 18 239-256 229-246 (454)
342 2zwa_A Leucine carboxyl methyl 95.7 1.3 4.4E-05 41.9 19.5 182 6-187 412-639 (695)
343 3ott_A Two-component system se 95.6 1.6 5.5E-05 41.7 30.3 234 7-254 83-340 (758)
344 1cru_A Protein (soluble quinop 95.5 1.2 4.1E-05 39.5 20.3 101 26-126 26-162 (454)
345 3s25_A Hypothetical 7-bladed b 95.5 0.91 3.1E-05 37.8 22.9 160 5-183 87-255 (302)
346 1tl2_A L10, protein (tachylect 95.0 0.96 3.3E-05 35.4 18.4 133 38-177 4-157 (236)
347 3das_A Putative oxidoreductase 94.1 2.4 8.2E-05 36.0 18.3 145 109-256 33-220 (347)
348 2g8s_A Glucose/sorbosone dehyd 92.5 4.5 0.00015 34.4 25.2 59 153-212 271-339 (353)
349 3sbq_A Nitrous-oxide reductase 91.5 1.3 4.3E-05 40.0 9.7 93 7-100 299-409 (638)
350 2wg3_C Hedgehog-interacting pr 90.2 9.5 0.00033 33.9 26.5 228 27-256 14-354 (463)
351 3qhy_B Beta-lactamase inhibito 89.5 7.6 0.00026 31.8 19.7 212 27-258 24-246 (282)
352 3b7f_A Glycosyl hydrolase, BNR 89.3 9.9 0.00034 32.8 17.7 211 39-254 23-296 (394)
353 3uc1_A DNA gyrase subunit A; D 89.3 8.9 0.00031 32.2 19.2 157 26-183 94-279 (327)
354 3no0_A DNA gyrase subunit A; D 88.3 9.2 0.00032 31.2 21.3 195 27-225 24-245 (276)
355 3b7f_A Glycosyl hydrolase, BNR 86.0 16 0.00054 31.4 20.3 214 28-246 116-391 (394)
356 3q6k_A 43.2 kDa salivary prote 85.1 17 0.0006 31.1 24.6 157 6-183 123-306 (381)
357 1suu_A DNA gyrase subunit A; t 84.7 16 0.00055 30.4 22.3 189 35-226 5-231 (312)
358 4gq2_M Nucleoporin NUP120; bet 83.6 36 0.0012 33.5 22.4 39 153-191 236-274 (950)
359 3q6k_A 43.2 kDa salivary prote 76.0 37 0.0013 29.1 20.9 249 5-255 2-341 (381)
360 4gq2_M Nucleoporin NUP120; bet 74.1 5.4 0.00019 39.2 6.4 39 27-65 236-274 (950)
361 4hvt_A Ritya.17583.B, post-pro 73.8 61 0.0021 30.6 23.2 222 2-225 152-429 (711)
362 3no0_A DNA gyrase subunit A; D 69.1 45 0.0015 27.1 19.6 155 26-182 67-245 (276)
363 3f7f_A Nucleoporin NUP120; nuc 67.2 26 0.00089 32.9 8.8 36 155-192 224-259 (729)
364 4fhn_B Nucleoporin NUP120; pro 66.2 5.9 0.0002 39.9 4.9 38 28-65 239-276 (1139)
365 2wg3_C Hedgehog-interacting pr 64.5 76 0.0026 28.1 15.3 106 109-215 15-158 (463)
366 3zwu_A Alkaline phosphatase PH 62.4 36 0.0012 31.2 8.8 58 29-86 478-548 (592)
367 3f7f_A Nucleoporin NUP120; nuc 60.5 15 0.00053 34.4 6.0 37 28-66 223-259 (729)
368 4a9v_A PHOX; hydrolase, beta-p 56.3 73 0.0025 29.1 9.4 60 27-86 476-548 (592)
369 3zwu_A Alkaline phosphatase PH 56.3 49 0.0017 30.4 8.6 60 197-257 478-550 (592)
370 3uc1_A DNA gyrase subunit A; D 55.6 90 0.0031 26.0 23.2 197 27-225 42-278 (327)
371 4fhn_B Nucleoporin NUP120; pro 55.1 1.8E+02 0.0061 29.3 17.5 38 154-191 239-276 (1139)
372 3kci_A Probable E3 ubiquitin-p 54.7 1E+02 0.0035 26.4 26.4 217 39-258 63-345 (389)
373 1suu_A DNA gyrase subunit A; t 53.1 96 0.0033 25.6 24.6 156 27-183 47-231 (312)
374 1wp5_A Topoisomerase IV; broke 48.4 1.2E+02 0.004 25.3 19.7 155 27-182 92-276 (323)
375 3l6v_A GYRA, DNA gyrase subuni 47.6 1.3E+02 0.0045 25.6 25.0 191 34-226 3-265 (370)
376 4a9v_A PHOX; hydrolase, beta-p 46.4 1.2E+02 0.004 27.8 9.1 61 196-257 477-550 (592)
377 4hvt_A Ritya.17583.B, post-pro 43.5 2.2E+02 0.0074 26.9 17.8 175 71-249 131-361 (711)
378 1zvt_A Topoisomerase IV subuni 41.5 1.3E+02 0.0045 23.9 14.0 144 82-226 4-163 (256)
379 3kci_A Probable E3 ubiquitin-p 41.0 1.7E+02 0.0058 24.9 26.7 217 3-226 69-345 (389)
380 1zvt_A Topoisomerase IV subuni 38.1 1.5E+02 0.0052 23.6 14.6 143 40-183 4-163 (256)
381 1zi0_A DNA gyrase subunit A; b 36.1 1.8E+02 0.0062 23.9 23.6 219 3-221 10-273 (307)
382 1sqj_A OXG-RCBH, oligoxylogluc 30.3 3.7E+02 0.013 25.7 22.1 146 26-173 14-190 (789)
383 1q47_A Semaphorin 3A; beta pro 25.8 2E+02 0.0067 25.8 7.2 59 120-178 422-487 (495)
384 1olz_A Semaphorin 4D; developm 25.6 1.2E+02 0.004 28.4 6.0 59 120-178 416-477 (663)
385 1wp5_A Topoisomerase IV; broke 24.5 3E+02 0.01 22.8 23.6 156 27-183 39-225 (323)
386 1q47_A Semaphorin 3A; beta pro 23.3 2.7E+02 0.0093 24.8 7.7 55 40-94 423-487 (495)
387 3l6v_A GYRA, DNA gyrase subuni 21.8 3.7E+02 0.013 22.8 25.7 156 26-182 45-264 (370)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1e-50 Score=380.58 Aligned_cols=381 Identities=13% Similarity=0.140 Sum_probs=290.1
Q ss_pred cCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc--eeEEecccccceEEEEEecCCC
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS--VVSTFKSHQSTILAVAVLSDSR 81 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~ 81 (392)
.++.|++|++.+++....+.+|...|++++|+|+|++||+|+.|++|+|||+.+++ ....+..|.++|.+++|+|+++
T Consensus 37 ~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~ 116 (611)
T 1nr0_A 37 NGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK 116 (611)
T ss_dssp ETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred CCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCC
Confidence 35799999999999999999999999999999999999999999999999997543 4567888999999999999999
Q ss_pred EEEEEeCC----CeEEEEEcCCce-eeeecccceeEEEEeCCCC-EEEEecCCCcEEEEeCCCCCCCCcceeeeccccce
Q psy17243 82 RVVTSDKA----GVIAVWVADNAQ-LLYSALGPSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEI 155 (392)
Q Consensus 82 ~l~~~~~d----~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v 155 (392)
.|++++.+ +.|++||..+.. .+..+...+.+++|+|++. .|++++.|+.|++||.... .......+|...|
T Consensus 117 ~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~---~~~~~l~~H~~~V 193 (611)
T 1nr0_A 117 RIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF---KFKSTFGEHTKFV 193 (611)
T ss_dssp EEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB---EEEEEECCCSSCE
T ss_pred EEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC---eEeeeeccccCce
Confidence 99998875 478888753321 2334556889999999987 6999999999999998632 3334456799999
Q ss_pred EEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe-------cCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCc
Q psy17243 156 TCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV-------GHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGG 228 (392)
Q Consensus 156 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 228 (392)
.+++|+|++++|++++.|++|++||+.+++.+..+. +|...|.+++|+ +++.+|++++.|++|++||+.+++
T Consensus 194 ~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s-pdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 194 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS-PDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCc
Confidence 999999999999999999999999999999888874 799999999999 688899999999999999999876
Q ss_pred eee-------------------------------------------eecccccceeEEEEcCCCeEEEEcCCCCCCCCCC
Q psy17243 229 EEH-------------------------------------------FLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPK 265 (392)
Q Consensus 229 ~~~-------------------------------------------~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~ 265 (392)
++. .+.+|...|.+++|+|||++++++..++....+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 543 3347888999999999999999887665432211
Q ss_pred Ccccc-----------------------ccccccccceeEEEeccCC-------------ccee----------------
Q psy17243 266 RPLRR-----------------------LLKKEVSLDTYTWQRKYGH-------------LTSS---------------- 293 (392)
Q Consensus 266 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~-------------~~~~---------------- 293 (392)
..... +...........|....+. .+..
T Consensus 353 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~ 432 (611)
T 1nr0_A 353 ISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 432 (611)
T ss_dssp TTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESS
T ss_pred CCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCc
Confidence 10000 0000000001111100000 0000
Q ss_pred ----------------EEEeecccccceeEEEeeccccceecceeccC--------CCC------CCChhhhhhhcccCh
Q psy17243 294 ----------------IMMAAVDERLKRRFSVSASMEEISKIPIKDNV--------GSQ------GLGPEQAALAQSQHF 343 (392)
Q Consensus 294 ----------------~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~--------~~~------~~s~dg~~la~s~~~ 343 (392)
.........++++++++++.|+++++|..... ++. +|||||++|| +++.
T Consensus 433 ~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~la-s~s~ 511 (611)
T 1nr0_A 433 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLV-ATDQ 511 (611)
T ss_dssp EEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEE-EEET
T ss_pred eEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEE-EEcC
Confidence 00122344678999999999999999975421 222 8999999999 9999
Q ss_pred HHHHHHhhCCCCCCccccccccc-cccCccccccccCccCCCCccccc
Q psy17243 344 DQLEALWNKKSPPRSRRFEHSMS-KQNSYSSRQHSVDTDELSSPVDEF 390 (392)
Q Consensus 344 d~~i~~Wd~~~~~~~~~~~~~~~-~~~~~~~~~fspdg~~l~~~~~d~ 390 (392)
|++|++||+.++..... ..... +...+.+++|||||++||+|+.|.
T Consensus 512 d~~v~~w~~~~~~~~~~-~~~~~~H~~~V~~v~fspdg~~lasgs~D~ 558 (611)
T 1nr0_A 512 SRKVIPYSVANNFELAH-TNSWTFHTAKVACVSWSPDNVRLATGSLDN 558 (611)
T ss_dssp TSCEEEEEGGGTTEESC-CCCCCCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCEEEEEcCCCCceee-eeeeeecccceeEEEECCCCCEEEEEECCC
Confidence 99999999987332111 11122 556688899999999999998874
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.2e-49 Score=369.11 Aligned_cols=381 Identities=14% Similarity=0.190 Sum_probs=282.1
Q ss_pred CCccCCeEEEEECCCcc--ceeeeccCCcCeeEEEecCCCCeEEEEeCC----CeEEEEeCCCCceeEEecccccceEEE
Q psy17243 1 MGGMDCLVNVWQMNSHE--LQSTMEGHLNTVSCVAISPNSIFAVSGSED----NTAKVWGLTLGSVVSTFKSHQSTILAV 74 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----g~v~iwd~~~~~~~~~~~~~~~~v~~~ 74 (392)
+|+.||+|+|||+.+++ ....+.+|..+|.+++|+|++++|++++.+ +.|++|| .++....+.+|...|.++
T Consensus 76 sg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v 153 (611)
T 1nr0_A 76 SGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSV 153 (611)
T ss_dssp EEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEE
T ss_pred EEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEE
Confidence 57889999999997543 455788899999999999999999998865 4677776 567778889999999999
Q ss_pred EEecCCC-EEEEEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcce----
Q psy17243 75 AVLSDSR-RVVTSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDER---- 146 (392)
Q Consensus 75 ~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~---- 146 (392)
+|+|++. .|++++.|++|++||..+++.+..+ ...+.+++|+|++++|++++.|+.|++||+.++.......
T Consensus 154 ~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~ 233 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL 233 (611)
T ss_dssp EECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc
Confidence 9999987 6999999999999999988766544 4578999999999999999999999999987543321110
Q ss_pred eeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEE-------------------------------------
Q psy17243 147 FTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQV------------------------------------- 189 (392)
Q Consensus 147 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~------------------------------------- 189 (392)
...+|...|.+++|+|++++|++++.|++|++||+++++++..
T Consensus 234 ~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~ 313 (611)
T 1nr0_A 234 KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPEL 313 (611)
T ss_dssp SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTT
T ss_pred cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCC
Confidence 0116889999999999999999999999999999988765433
Q ss_pred ------EecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeee-cccccceeEEEEcCCCeEEEEcCCC----
Q psy17243 190 ------LVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFL-AGHLGCVTCVKLAGDGTVAMSDLPP---- 258 (392)
Q Consensus 190 ------~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~dg~~~~~~~~~---- 258 (392)
+.+|...|++++|+ +++.+|++++.|+.|++||+.+++....+ .+|...|.+++|++++.++..+.+.
T Consensus 314 ~~~~~~~~gh~~~v~~l~~s-pdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~ 392 (611)
T 1nr0_A 314 GSIDQVRYGHNKAITALSSS-ADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKV 392 (611)
T ss_dssp TEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred CCcceEEcCCCCCEEEEEEe-CCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEE
Confidence 35788999999999 68899999999999999999988876655 4577777777777665544332211
Q ss_pred -----CCCCCC------------------C----------------------------------Ccccccccc-ccccce
Q psy17243 259 -----SRPAGP------------------K----------------------------------RPLRRLLKK-EVSLDT 280 (392)
Q Consensus 259 -----~~~~~~------------------~----------------------------------~~~~~~~~~-~~~~~~ 280 (392)
...... . .|..+++.. ...-..
T Consensus 393 w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v 472 (611)
T 1nr0_A 393 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKV 472 (611)
T ss_dssp ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred eecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeE
Confidence 000000 0 000000000 001112
Q ss_pred eEEEecc---------CCcceeEEEeecccccceeEEEeeccccceecceecc---------CC-CC------CCChhhh
Q psy17243 281 YTWQRKY---------GHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDN---------VG-SQ------GLGPEQA 335 (392)
Q Consensus 281 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~---------~~-~~------~~s~dg~ 335 (392)
..|.... +|...+ ..+...++++++++++.|+++++|.... .+ |. +|+|||+
T Consensus 473 ~lwd~~~~~~~~~~~~~h~~~v---~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~ 549 (611)
T 1nr0_A 473 HVYKLSGASVSEVKTIVHPAEI---TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV 549 (611)
T ss_dssp EEEEEETTEEEEEEEEECSSCE---EEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSS
T ss_pred EEEEccCCceeeeeccCCCCce---EEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCC
Confidence 2333221 222222 2334566789999999999999997643 11 33 8999999
Q ss_pred hhhcccChHHHHHHhhCCCCCCcccccccccc-ccCccccccccCccCCCCccccc
Q psy17243 336 ALAQSQHFDQLEALWNKKSPPRSRRFEHSMSK-QNSYSSRQHSVDTDELSSPVDEF 390 (392)
Q Consensus 336 ~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~-~~~~~~~~fspdg~~l~~~~~d~ 390 (392)
+|| +++.|++|+|||+.++..... .....+ ...+.+++|+|||+ ||+++.|.
T Consensus 550 ~la-sgs~D~~v~lW~~~~~~~~~~-~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~ 602 (611)
T 1nr0_A 550 RLA-TGSLDNSVIVWNMNKPSDHPI-IIKGAHAMSSVNSVIWLNETT-IVSAGQDS 602 (611)
T ss_dssp EEE-EEETTSCEEEEETTCTTSCCE-EETTSSTTSCEEEEEEEETTE-EEEEETTS
T ss_pred EEE-EEECCCcEEEEECCCcccccc-hhhccCcccCeeEEEEcCCCE-EEEecCCC
Confidence 999 999999999999987764220 111223 45677899999999 88887764
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4e-48 Score=361.81 Aligned_cols=361 Identities=22% Similarity=0.318 Sum_probs=294.0
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|++
T Consensus 197 ~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~ 274 (577)
T 2ymu_A 197 SASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDG 274 (577)
T ss_dssp EEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTS
T ss_pred EEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCC
Confidence 4678999999995 57888889999999999999999999999999999999995 577888999999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCcee--eeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEE
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQL--LYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCF 158 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~ 158 (392)
+.|++++.|+.|++||...... +..+...+.+++++|+++.+++++.|+.|++||... ........|...+.++
T Consensus 275 ~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~----~~~~~~~~~~~~v~~~ 350 (577)
T 2ymu_A 275 QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG----QHLQTLTGHSSSVWGV 350 (577)
T ss_dssp SEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS----CEEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC----CeeEEEeCCCCCEEEE
Confidence 9999999999999999754322 234456789999999999999999999999999853 2334445788999999
Q ss_pred EEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccccc
Q psy17243 159 TVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLG 238 (392)
Q Consensus 159 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 238 (392)
+|+|++++|++++.|+.|++||. +++.+..+.+|...|++++|+ +++.+|++++.|+.|++||. +++.+..+.+|..
T Consensus 351 ~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s-~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~ 427 (577)
T 2ymu_A 351 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS 427 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEEC-TTSSCEEEEETTSEEEEECT-TCCEEEEEECCSS
T ss_pred EECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEEC-CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCC
Confidence 99999999999999999999995 678888999999999999999 67889999999999999995 5788889999999
Q ss_pred ceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeecccccee
Q psy17243 239 CVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISK 318 (392)
Q Consensus 239 ~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~ 318 (392)
.|.+++|+||+++++++..++....+ .. ... ......+|...+..+ ...++++++++++.|+.++
T Consensus 428 ~v~~~~~s~d~~~l~~~~~d~~v~~w-----~~--~~~-----~~~~~~~~~~~v~~~---~~spd~~~las~~~d~~i~ 492 (577)
T 2ymu_A 428 SVWGVAFSPDDQTIASASDDKTVKLW-----NR--NGQ-----LLQTLTGHSSSVRGV---AFSPDGQTIASASDDKTVK 492 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEE-----ET--TSC-----EEEEEECCSSCEEEE---EECTTSCEEEEEETTSEEE
T ss_pred CeEEEEECCCCCEEEEEcCCCEEEEE-----EC--CCC-----EEEEEcCCCCCEEEE---EEcCCCCEEEEEeCCCEEE
Confidence 99999999999999998755433221 11 000 011122444433333 3356788999999999999
Q ss_pred cceecc------CCCC------CCChhhhhhhcccChHHHHHHhhCCCCCCccccccccccccCccccccccCccCCCCc
Q psy17243 319 IPIKDN------VGSQ------GLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTDELSSP 386 (392)
Q Consensus 319 ~~~~~~------~~~~------~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~ 386 (392)
+|.... .++. +|+|||++|| +++.|+.|+|||. +++... ....+...+.+++|+|||++|+++
T Consensus 493 iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~-s~~~dg~v~lwd~-~~~~~~---~~~~h~~~v~~~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 493 LWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIA-SASDDKTVKLWNR-NGQLLQ---TLTGHSSSVWGVAFSPDGQTIASA 567 (577)
T ss_dssp EEETTSCEEEEEECCSSCEEEEEECTTSSCEE-EEETTSEEEEECT-TSCEEE---EEECCSSCEEEEEECTTSSCEEEE
T ss_pred EEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEE-EEECcCEEEEEeC-CCCEEE---EEcCCCCCEEEEEEcCCCCEEEEE
Confidence 997432 1222 8999999999 9999999999996 343322 222345668889999999999998
Q ss_pred cccc
Q psy17243 387 VDEF 390 (392)
Q Consensus 387 ~~d~ 390 (392)
+.|.
T Consensus 568 ~~D~ 571 (577)
T 2ymu_A 568 SSDK 571 (577)
T ss_dssp ETTS
T ss_pred eCCC
Confidence 8774
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.2e-46 Score=332.11 Aligned_cols=238 Identities=23% Similarity=0.347 Sum_probs=218.7
Q ss_pred eeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcC
Q psy17243 19 QSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVAD 98 (392)
Q Consensus 19 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 98 (392)
...+.+|..+|++++|+|++++|++|+.||+|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCc
Q psy17243 99 NAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMS 175 (392)
Q Consensus 99 ~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 175 (392)
+++.+..+ ...+.+++|+|++++|++++.|+.|++||++++ ........|...|.++.++|++++|++++.|+.
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG---YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC---cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 98877654 457899999999999999999999999999854 334455688999999999999999999999999
Q ss_pred EEEEEcCCCeEEEEEecCCCceeEEEEecCC-------------------CcEEEEecCCCeEEEEECCCCceeeeeccc
Q psy17243 176 LKVWQVVGGKLAQVLVGHTDHVSCVAVAVTN-------------------KSLVVSGSKDSNLIVWDMETGGEEHFLAGH 236 (392)
Q Consensus 176 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 236 (392)
|++||++++++...+.+|...|.+++|+|.. +.+|++|+.|+.|++||+++++++..+.+|
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 9999999999999999999999999999642 668999999999999999999999999999
Q ss_pred ccceeEEEEcCCCeEEEEcCCCC
Q psy17243 237 LGCVTCVKLAGDGTVAMSDLPPS 259 (392)
Q Consensus 237 ~~~v~~~~~~~dg~~~~~~~~~~ 259 (392)
...|.+++|+|+|++++++..++
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~D~ 360 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCADDK 360 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTT
T ss_pred CCcEEEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999876543
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.7e-46 Score=347.23 Aligned_cols=361 Identities=23% Similarity=0.321 Sum_probs=289.1
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
||+.|+.|+|||. ++++++.+.+|...|++++|+|++++|++++.|++|+|||. +++.+..+.+|...|.+++|+|++
T Consensus 33 s~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~ 110 (577)
T 2ymu_A 33 SASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG 110 (577)
T ss_dssp EEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTS
T ss_pred EEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCC
Confidence 4788999999995 68899999999999999999999999999999999999995 678899999999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCceeee-------------------------------------------ecccceeEEEEeC
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLLY-------------------------------------------SALGPSKCLTVTH 117 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~~-------------------------------------------~~~~~~~~~~~~~ 117 (392)
++|++++.|+.+++|+........ .....+.++.++|
T Consensus 111 ~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 190 (577)
T 2ymu_A 111 QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSP 190 (577)
T ss_dssp SEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECT
T ss_pred CEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecC
Confidence 999999999999999875432110 1123456788999
Q ss_pred CCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCce
Q psy17243 118 NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHV 197 (392)
Q Consensus 118 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v 197 (392)
+++++++++.|+.|++||.. .........|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|
T Consensus 191 ~~~~l~~~~~d~~v~~w~~~----~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v 265 (577)
T 2ymu_A 191 DGQTIASASDDKTVKLWNRN----GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV 265 (577)
T ss_dssp TSSCEEEEETTSEEEEECTT----SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCE
T ss_pred CCCEEEEEcCCCEEEEEeCC----CcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCE
Confidence 99999999999999999964 2334455678999999999999999999999999999995 567888899999999
Q ss_pred eEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccc
Q psy17243 198 SCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVS 277 (392)
Q Consensus 198 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (392)
++++|+ +++.++++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.++++..++....+ ..... .
T Consensus 266 ~~v~~~-~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w-----~~~~~--~ 336 (577)
T 2ymu_A 266 NGVAFR-PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLW-----NRNGQ--H 336 (577)
T ss_dssp EEEEEC-TTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE-----ETTSC--E
T ss_pred EEEEEc-CCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEE-----eCCCC--e
Confidence 999999 67889999999999999996 467788899999999999999999999988755433221 11100 0
Q ss_pred cceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecceecc------CCCC------CCChhhhhhhcccChHH
Q psy17243 278 LDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDN------VGSQ------GLGPEQAALAQSQHFDQ 345 (392)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~------~~~~------~~s~dg~~la~s~~~d~ 345 (392)
.....+|...+..+ ...+++.++++++.|+.+++|.... .++. +|+|||++|+ +++.|+
T Consensus 337 -----~~~~~~~~~~v~~~---~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~-~~~~d~ 407 (577)
T 2ymu_A 337 -----LQTLTGHSSSVWGV---AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIA-SASDDK 407 (577)
T ss_dssp -----EEEECCCSSCEEEE---EECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEE-EEETTS
T ss_pred -----eEEEeCCCCCEEEE---EECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEE-EEeCCC
Confidence 01122333333332 3345678999999999999996421 1111 8999999998 999999
Q ss_pred HHHHhhCCCCCCccccccccccccCccccccccCccCCCCccccc
Q psy17243 346 LEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTDELSSPVDEF 390 (392)
Q Consensus 346 ~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~~~d~ 390 (392)
.|++||.. ++... ....+...+..++|+||+++||+++.|.
T Consensus 408 ~v~~~~~~-~~~~~---~~~~~~~~v~~~~~s~d~~~l~~~~~d~ 448 (577)
T 2ymu_A 408 TVKLWNRN-GQLLQ---TLTGHSSSVWGVAFSPDDQTIASASDDK 448 (577)
T ss_dssp EEEEECTT-CCEEE---EEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEeCC-CCEEE---EecCCCCCeEEEEECCCCCEEEEEcCCC
Confidence 99999963 33211 2223445577799999999999887763
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.8e-45 Score=325.31 Aligned_cols=251 Identities=20% Similarity=0.403 Sum_probs=232.1
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|++||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++
T Consensus 125 s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~ 204 (410)
T 1vyh_C 125 SASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG 204 (410)
T ss_dssp EEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS
T ss_pred EEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEE
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITC 157 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~ 157 (392)
++|++++.|+.|++||+.+++.+..+ ...+.++.+++++.++++++.|+.|++||+.+. ........|...|.+
T Consensus 205 ~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~---~~~~~~~~h~~~v~~ 281 (410)
T 1vyh_C 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK---ECKAELREHRHVVEC 281 (410)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCC---ceeeEecCCCceEEE
Confidence 99999999999999999999876654 446889999999999999999999999999744 333344578899999
Q ss_pred EEEEcC--------------------CCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCC
Q psy17243 158 FTVTWD--------------------SQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDS 217 (392)
Q Consensus 158 ~~~~~~--------------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 217 (392)
++|+|+ +.+|++|+.|+.|++||+++++++..+.+|...|++++|+ +++.+|++++.|+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~-~~g~~l~s~s~D~ 360 (410)
T 1vyh_C 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-SGGKFILSCADDK 360 (410)
T ss_dssp EEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC-SSSSCEEEEETTT
T ss_pred EEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEc-CCCCEEEEEeCCC
Confidence 999996 6789999999999999999999999999999999999999 6788999999999
Q ss_pred eEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEc
Q psy17243 218 NLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 218 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
.|++||+.+++++..+.+|...|++++|+|++.+++++
T Consensus 361 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sg 398 (410)
T 1vyh_C 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398 (410)
T ss_dssp EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEE
T ss_pred eEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEE
Confidence 99999999999999999999999999999998776664
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-45 Score=317.07 Aligned_cols=240 Identities=21% Similarity=0.298 Sum_probs=212.8
Q ss_pred ccceeeeccCCcCeeEEEecCC----CCeEEEEeCCCeEEEEeCCCCce--eEEecccccceEEEEEecCCCEEEEEeCC
Q psy17243 16 HELQSTMEGHLNTVSCVAISPN----SIFAVSGSEDNTAKVWGLTLGSV--VSTFKSHQSTILAVAVLSDSRRVVTSDKA 89 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~~----~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 89 (392)
+.+.+.+++|.+.|++++|+|+ +.+|++|+.|++|+||++.+++. ...+.+|...|.+++|++++..+++++.|
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC
Confidence 4455667899999999999985 56899999999999999987754 45688999999999999999999999999
Q ss_pred CeEEEEEcCCceeeeecc---cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCE
Q psy17243 90 GVIAVWVADNAQLLYSAL---GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQY 166 (392)
Q Consensus 90 ~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 166 (392)
+.|++||+.+++.+..+. ..+.+++|+|++++|++++.++.|++|+++... .......+...+.+++|+|++++
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~---~~~~~~~~~~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK---KEYSLDTRGKFILSIAYSPDGKY 178 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS---EEEEEECSSSCEEEEEECTTSSE
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc---eeEEecCCCceEEEEEECCCCCE
Confidence 999999999998876543 467789999999999999999999999997543 33344467788999999999999
Q ss_pred EEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEc
Q psy17243 167 LITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLA 246 (392)
Q Consensus 167 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 246 (392)
|++++.|+.|++||+++++.+..+.+|..+|.+++|+ +++.+|++++.|+.|++||+++++.+..+.+|...|.+++|+
T Consensus 179 lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 179 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS-PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC-TTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEc-CCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC
Confidence 9999999999999999999999999999999999999 678899999999999999999999999999999999999999
Q ss_pred CCCeEEEEcCCCC
Q psy17243 247 GDGTVAMSDLPPS 259 (392)
Q Consensus 247 ~dg~~~~~~~~~~ 259 (392)
|++++++++..++
T Consensus 258 p~~~~l~s~s~D~ 270 (321)
T 3ow8_A 258 PDDTHFVSSSSDK 270 (321)
T ss_dssp TTSSEEEEEETTS
T ss_pred CCCCEEEEEeCCC
Confidence 9999999876443
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-44 Score=311.18 Aligned_cols=256 Identities=28% Similarity=0.357 Sum_probs=233.8
Q ss_pred CCccCCeEEEEECCCcc--ceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEec
Q psy17243 1 MGGMDCLVNVWQMNSHE--LQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLS 78 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 78 (392)
||+.|++|+||++.+.+ ....+.+|...|.+++|++++.++++++.|++|++||+++++.+..+..|...+.+++|+|
T Consensus 53 tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp 132 (321)
T 3ow8_A 53 TGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP 132 (321)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECT
T ss_pred EEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECC
Confidence 57899999999997664 3456889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccce
Q psy17243 79 DSRRVVTSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEI 155 (392)
Q Consensus 79 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v 155 (392)
++++|++++.++.|++||+++++....+ ...+.+++|+|++++|++++.|+.|++||+++. ........|..+|
T Consensus 133 dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~---~~~~~~~~h~~~v 209 (321)
T 3ow8_A 133 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG---KLLHTLEGHAMPI 209 (321)
T ss_dssp TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCC
T ss_pred CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC---cEEEEEcccCCce
Confidence 9999999999999999999998776544 346889999999999999999999999999743 3344455788999
Q ss_pred EEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc
Q psy17243 156 TCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG 235 (392)
Q Consensus 156 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 235 (392)
.+++|+|++++|++++.|+.|++||+++++....+.+|...|.+++|+ +++.+|++++.|+.|++||+.+++++..+.+
T Consensus 210 ~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s-p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 288 (321)
T 3ow8_A 210 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC-PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 288 (321)
T ss_dssp CEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC
Confidence 999999999999999999999999999999999999999999999999 6788999999999999999999999999999
Q ss_pred cccceeEEEEcCCCeEEEEcCCCCC
Q psy17243 236 HLGCVTCVKLAGDGTVAMSDLPPSR 260 (392)
Q Consensus 236 ~~~~v~~~~~~~dg~~~~~~~~~~~ 260 (392)
|...|.+++|+|+|+.++++..++.
T Consensus 289 h~~~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 289 HQDQVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTCC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCe
Confidence 9999999999999999999875543
No 9
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.5e-45 Score=371.32 Aligned_cols=385 Identities=16% Similarity=0.227 Sum_probs=294.8
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEec--
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLS-- 78 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-- 78 (392)
+|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|
T Consensus 632 s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 632 SCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKS 711 (1249)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred EEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCC
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc-----------
Q psy17243 79 DSRRVVTSDKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD----------- 144 (392)
Q Consensus 79 ~~~~l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~----------- 144 (392)
++..+++++.|+.|++||+.+++.+.. +...+.+++|+|+++++++++.||.|++||+........
T Consensus 712 ~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 791 (1249)
T 3sfz_A 712 NHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSE 791 (1249)
T ss_dssp SCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC----
T ss_pred CceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccC
Confidence 556899999999999999999987654 455789999999999999999999999999864321100
Q ss_pred -----------------------------------------ceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCC
Q psy17243 145 -----------------------------------------ERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVG 183 (392)
Q Consensus 145 -----------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 183 (392)
......|...+.+++|+|+++++++++.++.|++||+.+
T Consensus 792 ~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 792 DPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp ----CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTT
T ss_pred CccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCC
Confidence 011125778899999999999999999999999999999
Q ss_pred CeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECC--------------------------------------
Q psy17243 184 GKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDME-------------------------------------- 225 (392)
Q Consensus 184 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~-------------------------------------- 225 (392)
++.+..+.+|...|++++|+ +++.+|++++.||.|++||+.
T Consensus 872 ~~~~~~~~~h~~~v~~v~~s-pdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 950 (1249)
T 3sfz_A 872 RLKVADCRGHLSWVHGVMFS-PDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIA 950 (1249)
T ss_dssp TEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEE
T ss_pred CceeeecCCCccceEEEEEC-CCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEe
Confidence 99999999999999999999 577788888888888888743
Q ss_pred -----------------------------------------CCceeeeecccccceeEEEEcCCCeEEEEcCCCCCCCCC
Q psy17243 226 -----------------------------------------TGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGP 264 (392)
Q Consensus 226 -----------------------------------------~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~ 264 (392)
+++....+.+|...|.+++|+|+|++++++..++....+
T Consensus 951 ~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vw 1030 (1249)
T 3sfz_A 951 GKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVW 1030 (1249)
T ss_dssp ESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEE
T ss_pred cCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 233344555677788888888888887777655432211
Q ss_pred CCcc---------------------ccccccccccceeEEEeccCCcceeEE-----EeecccccceeEEEeecccccee
Q psy17243 265 KRPL---------------------RRLLKKEVSLDTYTWQRKYGHLTSSIM-----MAAVDERLKRRFSVSASMEEISK 318 (392)
Q Consensus 265 ~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~s~d~~~~ 318 (392)
.... ..++.....-....|....+.....+. +......+++.++++++.|++++
T Consensus 1031 d~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~ 1110 (1249)
T 3sfz_A 1031 NWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAK 1110 (1249)
T ss_dssp ETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCC
T ss_pred ECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 1000 000111111122334333332222111 11223345788899999999999
Q ss_pred cceeccC-------CCC------CCChhhhhhhcccChHHHHHHhhCCCCCCccccc------cccccccCccccccccC
Q psy17243 319 IPIKDNV-------GSQ------GLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFE------HSMSKQNSYSSRQHSVD 379 (392)
Q Consensus 319 ~~~~~~~-------~~~------~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~------~~~~~~~~~~~~~fspd 379 (392)
+|..... ++. +|+|||++|| +++.||.|++||+.++.....+. ....+...+..++||||
T Consensus 1111 iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~la-t~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~d 1189 (1249)
T 3sfz_A 1111 IWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA-TGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPD 1189 (1249)
T ss_dssp EECSSSSSCSBCCCCCSSCEEEEEECSSSSEEE-EEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTT
T ss_pred EEECCCcceeeeeccCCCcEEEEEECCCCCEEE-EEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCC
Confidence 9975421 222 8999999999 99999999999999877633210 11234455777999999
Q ss_pred ccCCCCcc
Q psy17243 380 TDELSSPV 387 (392)
Q Consensus 380 g~~l~~~~ 387 (392)
|++|++++
T Consensus 1190 g~~l~s~~ 1197 (1249)
T 3sfz_A 1190 SKTLVSAG 1197 (1249)
T ss_dssp SSCEEEES
T ss_pred CCEEEECC
Confidence 99999765
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.7e-43 Score=301.98 Aligned_cols=253 Identities=20% Similarity=0.318 Sum_probs=228.3
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|++||+++++.+..+..|..+|.+++|+|++++|++|+.|++|++||+++++.+..+.+|...|.+++|+|++
T Consensus 30 s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 30 TTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK 109 (304)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred EEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCceee----eecccceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccce
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLL----YSALGPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEI 155 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v 155 (392)
++|++++.|+.|++||++++..+ ..+...+.+++|+| ++..|++++.|+.|++||++.... .......+...+
T Consensus 110 ~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~--~~~~~~~~~~~v 187 (304)
T 2ynn_A 110 PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGV 187 (304)
T ss_dssp SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC--SEEEECCCTTCE
T ss_pred CEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc--cceeccCCcCcE
Confidence 99999999999999999877332 33556789999999 678999999999999999974332 233344566889
Q ss_pred EEEEEEc--CCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeee
Q psy17243 156 TCFTVTW--DSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 156 ~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 233 (392)
..+.|+| ++.+|++++.|+.|++||+++++++..+.+|...|.+++|+ +++.+|++|+.||.|++||+.+++.+..+
T Consensus 188 ~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~-p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH-PTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp EEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEEC-CCCCEEEEEcCCCeEEEEECCCCceeeec
Confidence 9999987 67899999999999999999999999999999999999999 67889999999999999999999999999
Q ss_pred cccccceeEEEEcCCCe--EEEEcC
Q psy17243 234 AGHLGCVTCVKLAGDGT--VAMSDL 256 (392)
Q Consensus 234 ~~~~~~v~~~~~~~dg~--~~~~~~ 256 (392)
..|...+.+++|+|++. +++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~asg~ 291 (304)
T 2ynn_A 267 NVGLERSWCIATHPTGRKNYIASGF 291 (304)
T ss_dssp CCSSSSEEEEEECTTCGGGCEEEEE
T ss_pred cCCCccEEEEEECCCCCceEEEEec
Confidence 99999999999999875 577764
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.2e-44 Score=312.00 Aligned_cols=238 Identities=18% Similarity=0.339 Sum_probs=210.9
Q ss_pred ccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy17243 16 HELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVW 95 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 95 (392)
.+....+.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.+++|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCce----e---eeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEE
Q psy17243 96 VADNAQ----L---LYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLI 168 (392)
Q Consensus 96 d~~~~~----~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 168 (392)
++.+.+ . +..+...+.++.|++++. +++++.|+.|++||+.+. .......+|...|.+++|+|++++|+
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG---QQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC---cEEEEEcCCCCceEEEEECCCCCEEE
Confidence 998753 2 234556788999988775 889999999999999743 33444557899999999999999999
Q ss_pred EeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc--cccceeEEEEc
Q psy17243 169 TGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG--HLGCVTCVKLA 246 (392)
Q Consensus 169 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~ 246 (392)
+|+.|+.|++||+++++++..+.+|...|++++|+ +++.+|++++.||.|++||+++++.+..+.. +...|.+++|+
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 279 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFF-PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEEC
Confidence 99999999999999999999999999999999999 6788999999999999999999888776653 33479999999
Q ss_pred CCCeEEEEcCCC
Q psy17243 247 GDGTVAMSDLPP 258 (392)
Q Consensus 247 ~dg~~~~~~~~~ 258 (392)
|+|++++++..+
T Consensus 280 ~~g~~l~~g~~d 291 (340)
T 1got_B 280 KSGRLLLAGYDD 291 (340)
T ss_dssp TTSSEEEEEETT
T ss_pred CCCCEEEEECCC
Confidence 999999997644
No 12
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.3e-44 Score=347.66 Aligned_cols=376 Identities=16% Similarity=0.186 Sum_probs=291.6
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|+|||+.+++.+..+.+|..+|.+++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|++
T Consensus 30 ~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 30 TTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK 109 (814)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred EEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCc-eee---eecccceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccce
Q psy17243 81 RRVVTSDKAGVIAVWVADNA-QLL---YSALGPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEI 155 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~-~~~---~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v 155 (392)
++|++++.||.|++||+.++ ... ..+..++.+++|+| +++.+++++.||.|++||+..... .......+...+
T Consensus 110 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~~~v 187 (814)
T 3mkq_A 110 PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGV 187 (814)
T ss_dssp SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC--SEEEECCCTTCC
T ss_pred CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc--eeEEecCCCCCE
Confidence 99999999999999999887 333 33456889999999 889999999999999999975432 223333455889
Q ss_pred EEEEEEc--CCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeee
Q psy17243 156 TCFTVTW--DSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 156 ~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 233 (392)
.+++|+| ++.+|++++.||.|++||+++++.+..+.+|...|.+++|+ +++.++++++.||.|++||+.+++.+..+
T Consensus 188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH-PTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 9999999 89999999999999999999999999999999999999999 67889999999999999999999999999
Q ss_pred cccccceeEEEEcCCCe--EEEEcCCCCC---------CCCCCCcccccc------------------------------
Q psy17243 234 AGHLGCVTCVKLAGDGT--VAMSDLPPSR---------PAGPKRPLRRLL------------------------------ 272 (392)
Q Consensus 234 ~~~~~~v~~~~~~~dg~--~~~~~~~~~~---------~~~~~~~~~~~~------------------------------ 272 (392)
..|...+.+++|+|+|. +++.+..... ......+....+
T Consensus 267 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (814)
T 3mkq_A 267 NVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLS 346 (814)
T ss_dssp CCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBC
T ss_pred ecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccce
Confidence 99999999999999987 4555432210 000000000000
Q ss_pred -------ccccccceeEEEe------------------ccCCcceeEEEeecccccceeEEEeeccccceecceec----
Q psy17243 273 -------KKEVSLDTYTWQR------------------KYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKD---- 323 (392)
Q Consensus 273 -------~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~---- 323 (392)
..........|.. ........-.+......+++.++++++.++.+++|..-
T Consensus 347 ~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~~~~~ 426 (814)
T 3mkq_A 347 LQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYKNFKEVT 426 (814)
T ss_dssp CCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEETTTTEEEEEEECSEEEECTTSSCEEEECTTCCEEEEETTEECT
T ss_pred eeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEECccccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEECCCCcc
Confidence 0000011111111 00000000111123334578889999999999998532
Q ss_pred -cCCCCCCChhh---hhhhcccChHHHHHHhhCCCCCCccccccccccccCccccccccCccCCCCc
Q psy17243 324 -NVGSQGLGPEQ---AALAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTDELSSP 386 (392)
Q Consensus 324 -~~~~~~~s~dg---~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~ 386 (392)
.....+|+||| ++|+ +++.|+.|++||+.++..... +..... .++|||||++||++
T Consensus 427 ~~v~~~~~s~dg~~~~~l~-~~~~d~~v~~~d~~~~~~~~~----~~~~~~--~v~~s~dg~~la~~ 486 (814)
T 3mkq_A 427 SWSVPMHSAIDRLFSGALL-GVKSDGFVYFFDWDNGTLVRR----IDVNAK--DVIWSDNGELVMIV 486 (814)
T ss_dssp TCCCCCSSCCCEEECSSSE-EEEETTEEEEECTTTCCEEEE----ESSCEE--EEEECTTSSEEEEE
T ss_pred ceEEcCCcCccceecceEE-EEecCCEEEEEECCcCcEEEE----EecCCC--EEEEcCCCCEEEEE
Confidence 12233899999 5777 788999999999988766332 222222 68999999999977
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-44 Score=312.73 Aligned_cols=243 Identities=16% Similarity=0.195 Sum_probs=206.0
Q ss_pred CccceeeeccCCc-CeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeE---EecccccceEEEEEecCCCEEEEEeCCC
Q psy17243 15 SHELQSTMEGHLN-TVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVS---TFKSHQSTILAVAVLSDSRRVVTSDKAG 90 (392)
Q Consensus 15 ~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 90 (392)
..+++..+.+|.. .|.+++|+|++++|++|+.|++|+|||++++.... ...+|...|.+++|+|++++|++++.|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~ 83 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence 3456778889988 99999999999999999999999999998876432 2367999999999999999999999999
Q ss_pred eEEEEEcCCce--eee---ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCC
Q psy17243 91 VIAVWVADNAQ--LLY---SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQ 165 (392)
Q Consensus 91 ~i~iwd~~~~~--~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 165 (392)
.+++||+..+. .+. .+...+.+++|+|++++|++++.|+.|++||+..............|...|.+++|+|+++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 99999998763 333 3456889999999999999999999999999986544444455567899999999999999
Q ss_pred EEEEeeCCCcEEEEEcCCCe--EEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCC---------------c
Q psy17243 166 YLITGSRDMSLKVWQVVGGK--LAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG---------------G 228 (392)
Q Consensus 166 ~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------------~ 228 (392)
+|++++.|+.|++||.++++ +...+.+|...|++++|+ +++.+|++++.|++|++||...+ +
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s-p~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD-PSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC-CCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 99999999999999998875 456788999999999999 67889999999999999996432 2
Q ss_pred eeeeecc-cccceeEEEEcCCCeEEEEcCCC
Q psy17243 229 EEHFLAG-HLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 229 ~~~~~~~-~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
++..+.+ |...|.+++|+|++..++++..+
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d 273 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTGALATACGD 273 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTCCEEEEETT
T ss_pred eeEEecCCCCCcEEEEEEecCCCEEEEEeCC
Confidence 2334444 78899999999999988887544
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.4e-43 Score=305.79 Aligned_cols=235 Identities=18% Similarity=0.334 Sum_probs=209.4
Q ss_pred ccceeeeccCCcCeeEEEecCCC-CeEEEEeCCCeEEEEeCCC-----CceeEEecccccceEEEEEecCCCEEEEEeCC
Q psy17243 16 HELQSTMEGHLNTVSCVAISPNS-IFAVSGSEDNTAKVWGLTL-----GSVVSTFKSHQSTILAVAVLSDSRRVVTSDKA 89 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~v~iwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 89 (392)
..+..++.+|.+.|++++|+|++ ++|++|+.|++|++|++.. +.++..+.+|...|.+++|+|++++|++++.|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 44567789999999999999965 7999999999999999864 34567889999999999999999999999999
Q ss_pred CeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcC---
Q psy17243 90 GVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWD--- 163 (392)
Q Consensus 90 ~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~--- 163 (392)
+.|++||+.+++.+.. +...+.+++++|++.+|++++.|+.|++||++. .......+|...|.++++.|.
T Consensus 87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG----QCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS----CEEEEECCCSSCEEEEEECCC---
T ss_pred CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeEEEEeccCCcEEEEEEccCCCC
Confidence 9999999999987655 455789999999999999999999999999962 234445578999999999985
Q ss_pred ---CCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccce
Q psy17243 164 ---SQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCV 240 (392)
Q Consensus 164 ---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 240 (392)
+.+|++++.|+.|++||+++.+....+.+|...|.+++|+ +++.+|++++.||.|++||+.+++.+..+.. ...|
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s-p~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v 240 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTAS-PDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEV 240 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCE
T ss_pred CCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcE
Confidence 4489999999999999999999999999999999999999 6889999999999999999999999888875 4689
Q ss_pred eEEEEcCCCeEEEEcC
Q psy17243 241 TCVKLAGDGTVAMSDL 256 (392)
Q Consensus 241 ~~~~~~~dg~~~~~~~ 256 (392)
.+++|+|++.+++.+.
T Consensus 241 ~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 241 FSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEEEECSSSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEc
Confidence 9999999999998864
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.7e-43 Score=303.34 Aligned_cols=243 Identities=16% Similarity=0.276 Sum_probs=216.2
Q ss_pred ccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy17243 16 HELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVW 95 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 95 (392)
.+..+++.+|.+.|.+++|+|++++|++++.||+|++||+++++.+..+..|..+|.+++|+|++++|++++.|+.|++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 35567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEc-CCCEEEEee
Q psy17243 96 VADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTW-DSQYLITGS 171 (392)
Q Consensus 96 d~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 171 (392)
|+.+++.+..+ ...+.+++|+|++++|++++.|+.|++||++... .......+|...|.+++|+| ++.+|++|+
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT--EEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc--chhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 99999876554 4578999999999999999999999999997431 22334557899999999999 578999999
Q ss_pred CCCcEEEEEcCCCeEEEEEe-cCCCceeEEEEec-CCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCC
Q psy17243 172 RDMSLKVWQVVGGKLAQVLV-GHTDHVSCVAVAV-TNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDG 249 (392)
Q Consensus 172 ~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg 249 (392)
.|+.|++||+++.++...+. +|...+..+.|+| +++.+|++++.|+.|++||+++++++..+.+|...|.+++|+|++
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~ 240 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCC
Confidence 99999999998887666554 5667899999986 367899999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCC
Q psy17243 250 TVAMSDLPPSR 260 (392)
Q Consensus 250 ~~~~~~~~~~~ 260 (392)
.+++++..++.
T Consensus 241 ~~l~s~s~Dg~ 251 (304)
T 2ynn_A 241 PIIISGSEDGT 251 (304)
T ss_dssp SEEEEEETTSC
T ss_pred CEEEEEcCCCe
Confidence 99988765433
No 16
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.3e-44 Score=319.94 Aligned_cols=309 Identities=16% Similarity=0.308 Sum_probs=244.4
Q ss_pred eEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEE
Q psy17243 7 LVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTS 86 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 86 (392)
.+..|+..+....+.+.+|.+.|++++|+|++++|++|+.||+|+|||+.+++....+..|...|.+++|+|++++|+++
T Consensus 47 ~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACG 126 (380)
T ss_dssp GCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEEC
T ss_pred cccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEe
Confidence 34567777778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEEcCCce----------eeeecccceeEEEEeCC-CCEEEEecCCCcEEEEeCCCCCCCCcc--eeeecccc
Q psy17243 87 DKAGVIAVWVADNAQ----------LLYSALGPSKCLTVTHN-MKYIVSGDGDNSLRIWPTSPQTHKDDE--RFTVSHSE 153 (392)
Q Consensus 87 ~~d~~i~iwd~~~~~----------~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~--~~~~~~~~ 153 (392)
+.|+.+++||+.+.. .+..+...+.++.|.|+ +..|++++.|+.|++||+.++...... ....+|..
T Consensus 127 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp CSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred eCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 999999999987532 23345556788888886 457999999999999999865432211 11246888
Q ss_pred ceEEEEEEc-CCCEEEEeeCCCcEEEEEcC-CCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceee
Q psy17243 154 EITCFTVTW-DSQYLITGSRDMSLKVWQVV-GGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 154 ~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 231 (392)
.|.+++|++ ++++|++|+.|+.|++||++ ..+.+..+.+|...|++++|+ +++.+|++++.||+|++||+++++.+.
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF-PDGQRFGTGSDDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEEC-TTSSEEEEECSSSCEEEEETTTTEEEE
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEe-cCCCeEEEEcCCCeEEEEECCCCcEEE
Confidence 999999987 78999999999999999998 457788899999999999999 678899999999999999999999887
Q ss_pred eecccc-------cceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccc
Q psy17243 232 FLAGHL-------GCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLK 304 (392)
Q Consensus 232 ~~~~~~-------~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (392)
.+..+. ..|.+++|+|+|++++++..++.. +.|....+.....
T Consensus 286 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i-------------------~vwd~~~~~~~~~----------- 335 (380)
T 3iz6_a 286 VYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDC-------------------YVWDTLLAEMVLN----------- 335 (380)
T ss_dssp EECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCE-------------------EEEETTTCCEEEE-----------
T ss_pred EecccccccccccCceEEEEECCCCCEEEEEECCCCE-------------------EEEECCCCceEEE-----------
Confidence 775543 248999999999999998644322 2232211110000
Q ss_pred eeEEEeeccccceecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCC
Q psy17243 305 RRFSVSASMEEISKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPP 356 (392)
Q Consensus 305 ~~~~~s~s~d~~~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~ 356 (392)
+ . .....+...+...+|+|||++|+ +++.|+.|+||++....
T Consensus 336 ----~-~----~~~~~h~~~v~~l~~s~dg~~l~-sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 336 ----L-G----TLQNSHEGRISCLGLSSDGSALC-TGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ----E-C----CSCSSCCCCCCEEEECSSSSEEE-EECTTSCEEEEECCSSS
T ss_pred ----E-e----cccCCCCCceEEEEECCCCCEEE-EeeCCCCEEEEecCCCc
Confidence 0 0 00000111122237899999998 99999999999987543
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.9e-43 Score=306.69 Aligned_cols=238 Identities=16% Similarity=0.244 Sum_probs=211.2
Q ss_pred cceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEE
Q psy17243 17 ELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWV 96 (392)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 96 (392)
+....+++|...|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|++..+++++.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCc---------eeeeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEc--CCC
Q psy17243 97 ADNA---------QLLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTW--DSQ 165 (392)
Q Consensus 97 ~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~ 165 (392)
+... ..+..+...+.++.|+|++..|++++.|+.|++||+++. .......+|...|.+++|+| +++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG---QLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 8643 223456678899999999999999999999999999744 33445567899999999987 468
Q ss_pred EEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccc--ccceeEE
Q psy17243 166 YLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGH--LGCVTCV 243 (392)
Q Consensus 166 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~ 243 (392)
+|++|+.||.|++||+++++++..+.+|...|++++|+ +++.+|++++.|++|++||+++++.+..+..+ ...+.++
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY-PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 290 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEE
Confidence 99999999999999999999999999999999999999 67889999999999999999998877666543 3478999
Q ss_pred EEcCCCeEEEEcCCC
Q psy17243 244 KLAGDGTVAMSDLPP 258 (392)
Q Consensus 244 ~~~~dg~~~~~~~~~ 258 (392)
+|+|+|++++++..+
T Consensus 291 ~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 291 DFSLSGRLLFAGYND 305 (354)
T ss_dssp EECTTSSEEEEEETT
T ss_pred EEeCCCCEEEEEECC
Confidence 999999999987644
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.2e-42 Score=297.90 Aligned_cols=251 Identities=20% Similarity=0.313 Sum_probs=225.4
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCC----ceeEEecccccceEEEEE
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLG----SVVSTFKSHQSTILAVAV 76 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~ 76 (392)
+|+.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++|++.+. +....+.+|...|.++.|
T Consensus 72 s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 151 (340)
T 1got_B 72 SASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF 151 (340)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEE
T ss_pred EEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEE
Confidence 5789999999999999999999999999999999999999999999999999999875 356678889999999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeecccc
Q psy17243 77 LSDSRRVVTSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSE 153 (392)
Q Consensus 77 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 153 (392)
++++ .+++++.|+.|++||+++++.+..+ ...+.+++++|+++++++++.|+.|++||+++. ........|..
T Consensus 152 ~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~---~~~~~~~~h~~ 227 (340)
T 1got_B 152 LDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG---MCRQTFTGHES 227 (340)
T ss_dssp EETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---SEEEEECCCSS
T ss_pred CCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC---eeEEEEcCCcC
Confidence 9876 5899999999999999999877654 457899999999999999999999999999743 33444557899
Q ss_pred ceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEec--CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceee
Q psy17243 154 EITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVG--HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 154 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 231 (392)
.|.+++|+|++++|++++.|+.|++||+++++.+..+.. +...|++++|+ +++.+|++|+.|+.|++||+.+++.+.
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~g~~d~~i~vwd~~~~~~~~ 306 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALKADRAG 306 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEEC-CCCCEEEEECCCCeEEEEEcccCcEee
Confidence 999999999999999999999999999999988877653 23479999999 788999999999999999999999999
Q ss_pred eecccccceeEEEEcCCCeEEEEcC
Q psy17243 232 FLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 232 ~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.+.+|...|.+++|+|||.+++++.
T Consensus 307 ~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 307 VLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEE
T ss_pred EeecCCCcEEEEEEcCCCCEEEEEc
Confidence 9999999999999999998887764
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.4e-41 Score=291.28 Aligned_cols=253 Identities=23% Similarity=0.415 Sum_probs=228.3
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|+|++
T Consensus 40 s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 40 SSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred EeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEE
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITC 157 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~ 157 (392)
++|++++.|+.|++||+++++.+..+ ..++.++.|+|++++|++++.|+.|++||+++.... ......+...+..
T Consensus 120 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~ 197 (312)
T 4ery_A 120 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL--KTLIDDDNPPVSF 197 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEECCSSCCCEEE
T ss_pred CEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee--eEEeccCCCceEE
Confidence 99999999999999999998876554 457899999999999999999999999999754321 2223356678999
Q ss_pred EEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeE--EEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc
Q psy17243 158 FTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSC--VAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG 235 (392)
Q Consensus 158 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 235 (392)
++|+|++++|++++.|+.|++||+++++.+..+.+|.....+ ..++++++.+|++|+.||.|++||+.+++.+..+.+
T Consensus 198 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 277 (312)
T 4ery_A 198 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG 277 (312)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECC
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhc
Confidence 999999999999999999999999999999999888765433 356667889999999999999999999999999999
Q ss_pred cccceeEEEEcCCCeEEEEc
Q psy17243 236 HLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 236 ~~~~v~~~~~~~dg~~~~~~ 255 (392)
|...|.+++|+|++.+++++
T Consensus 278 h~~~v~~~~~~p~~~~l~s~ 297 (312)
T 4ery_A 278 HTDVVISTACHPTENIIASA 297 (312)
T ss_dssp CSSCEEEEEECSSSSEEEEE
T ss_pred cCCcEEEEeecCcCCceEEE
Confidence 99999999999999998875
No 20
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=305.17 Aligned_cols=225 Identities=16% Similarity=0.151 Sum_probs=190.9
Q ss_pred cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEE----ecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCC
Q psy17243 24 GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVST----FKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADN 99 (392)
Q Consensus 24 ~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 99 (392)
.|...|.+++|+|++ .|++|+.||+|+|||+++++.+.. +.+|...|++++|+|++++|++++.|+.|++||+++
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 367889999999986 688999999999999999876544 347999999999999999999999999999999999
Q ss_pred ceeeeec---ccceeEEEEeCCCC-EEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcC-CCEEEEeeCCC
Q psy17243 100 AQLLYSA---LGPSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWD-SQYLITGSRDM 174 (392)
Q Consensus 100 ~~~~~~~---~~~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg 174 (392)
++.+..+ ...+.+++|++++. +|++++.|+.|++||+++.+...... ...+...+.+++|+|+ +++|++|+.||
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIG-CSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeee-cceeeccceeeeecCCCCcceEEeccCC
Confidence 9887765 45789999999874 78999999999999998654332221 1245667899999985 57889999999
Q ss_pred cEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeE
Q psy17243 175 SLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTV 251 (392)
Q Consensus 175 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~ 251 (392)
.|++||+++++++..+.+|...|++++|+|.+..+|++|+.|++|+|||+.+++.+ .+.+|.+.|++++|+|++..
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHS 313 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTT
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCe
Confidence 99999999999999999999999999999666678999999999999999988754 57889999999999998753
No 21
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-43 Score=316.42 Aligned_cols=336 Identities=11% Similarity=0.122 Sum_probs=252.1
Q ss_pred ccCCeEEEEECCCcc---ceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCC----CceeEEecccccceEEEE
Q psy17243 3 GMDCLVNVWQMNSHE---LQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTL----GSVVSTFKSHQSTILAVA 75 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~ 75 (392)
+.|+.|++||+.+++ .+..+ .|...|.+++|+|++++|++++.||.|++||+.+ .+.+..+..|...|.+++
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~ 120 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVK 120 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEE
Confidence 789999999999876 33344 4899999999999999999999999999999987 458888999999999999
Q ss_pred EecC-CCEEEEEeCCCeEEEEEcCCce------eee------ecccceeEEEEeCC-CCEEEEecCCCcEEEEeCCCCCC
Q psy17243 76 VLSD-SRRVVTSDKAGVIAVWVADNAQ------LLY------SALGPSKCLTVTHN-MKYIVSGDGDNSLRIWPTSPQTH 141 (392)
Q Consensus 76 ~~~~-~~~l~~~~~d~~i~iwd~~~~~------~~~------~~~~~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~ 141 (392)
|+|+ +++|++++.|+.|++||+.+++ ... .+...+.+++|+|+ +.++++++.|+.|++||++....
T Consensus 121 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 200 (416)
T 2pm9_A 121 FNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE 200 (416)
T ss_dssp ECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE
T ss_pred EcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc
Confidence 9998 8999999999999999999876 222 34557889999999 78999999999999999975432
Q ss_pred CCcceeeecc------ccceEEEEEEcCC-CEEEEeeCCC---cEEEEEcCCC-eEEEEEe-cCCCceeEEEEecCCCcE
Q psy17243 142 KDDERFTVSH------SEEITCFTVTWDS-QYLITGSRDM---SLKVWQVVGG-KLAQVLV-GHTDHVSCVAVAVTNKSL 209 (392)
Q Consensus 142 ~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~dg---~i~i~d~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~~ 209 (392)
......+ ...+.+++|+|++ .+|++++.|+ .|++||++++ +++..+. +|...|.+++|+|.++.+
T Consensus 201 ---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 201 ---VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHL 277 (416)
T ss_dssp ---EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSC
T ss_pred ---ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCe
Confidence 2222222 7889999999997 6899999998 9999999986 6677777 899999999999658999
Q ss_pred EEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCC-eEEEEcCCCCCCCCCCCccccccccccccceeEEEeccC
Q psy17243 210 VVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDG-TVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYG 288 (392)
Q Consensus 210 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (392)
|++++.|+.|++||+++++++..+..|...|.+++|+|++ .+++++..++....+............... ...
T Consensus 278 l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~------~~~ 351 (416)
T 2pm9_A 278 LLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETE------TKQ 351 (416)
T ss_dssp EEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-------------
T ss_pred EEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCccccccc------ccc
Confidence 9999999999999999999999999999999999999999 788888755432211110000000000000 000
Q ss_pred CcceeEEEeecccccceeEEEeeccccc----eecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCC
Q psy17243 289 HLTSSIMMAAVDERLKRRFSVSASMEEI----SKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSP 355 (392)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~s~s~d~~----~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~ 355 (392)
... .......+..++..+.... ...|..+.....+|+|||++|| +++.|+.|+||++.++
T Consensus 352 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la-~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 352 QES------ETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQ-ITPDGKGVSITNPKIS 415 (416)
T ss_dssp ---------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEEC-BCTTSSCBCCBCCCCC
T ss_pred cCC------cccccccccccccccccccccccCCccccCCccceEEeeCCeEEE-EeCCCCeEEEEEeccC
Confidence 000 0000000001111111111 1123333334558999999999 9999999999999764
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-42 Score=299.61 Aligned_cols=240 Identities=20% Similarity=0.265 Sum_probs=196.5
Q ss_pred CCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCC--ceeEEe-cc-cccceEEEEEecCCCEEEEEeCC
Q psy17243 14 NSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLG--SVVSTF-KS-HQSTILAVAVLSDSRRVVTSDKA 89 (392)
Q Consensus 14 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d 89 (392)
.+.+++..+++|..+|.+++|+|+ +|++|+.|++|++||+..+ +.+..+ .. |...|.+++|+|++++|++++.|
T Consensus 2 ~~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 2 ASINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp -CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred cccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 345678889999999999999998 8999999999999999875 445555 44 99999999999999999999999
Q ss_pred CeEEEEEcCCc-------eee---eecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCC-CCCCcceeeeccccceEEE
Q psy17243 90 GVIAVWVADNA-------QLL---YSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQ-THKDDERFTVSHSEEITCF 158 (392)
Q Consensus 90 ~~i~iwd~~~~-------~~~---~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~v~~~ 158 (392)
+.|++||+... +.+ ..+...+.+++|+|++++|++++.|+.|++||++.. ...........|...|.++
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 99999998532 222 335567899999999999999999999999999533 2223344456789999999
Q ss_pred EEEcCCCEEEEeeCCCcEEEEEcCCC--eEEEEEecCCCceeEEEEecCC-CcEEEEecCCCeEEEEECCCC--------
Q psy17243 159 TVTWDSQYLITGSRDMSLKVWQVVGG--KLAQVLVGHTDHVSCVAVAVTN-KSLVVSGSKDSNLIVWDMETG-------- 227 (392)
Q Consensus 159 ~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~-------- 227 (392)
+|+|++++|++++.|++|++||..++ +++..+.+|...|.+++|+|.. +.+|++++.|++|++||+.++
T Consensus 160 ~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 239 (330)
T 2hes_X 160 IWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEW 239 (330)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccccee
Confidence 99999999999999999999999876 6788899999999999999543 568999999999999998764
Q ss_pred ceeeeecc-cccceeEEEEcCCCeEEEEcC
Q psy17243 228 GEEHFLAG-HLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 228 ~~~~~~~~-~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.....+.. |...|.+++|++++ +++++.
T Consensus 240 ~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~ 268 (330)
T 2hes_X 240 VCEAILPDVHKRQVYNVAWGFNG-LIASVG 268 (330)
T ss_dssp EEEEECCSCCSSCEEEEEECTTS-CEEEEE
T ss_pred EEeeecccccccceEEEEEcCCC-EEEEEe
Confidence 33445554 88999999999877 455543
No 23
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-42 Score=337.49 Aligned_cols=381 Identities=13% Similarity=0.057 Sum_probs=265.8
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|+||+..+.+....+. |..+|.+++|+| +++|++++.|++|++||+++++++..+. |...|++++|+|++
T Consensus 34 sgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g 110 (902)
T 2oaj_A 34 IATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASL 110 (902)
T ss_dssp EEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTC
T ss_pred EEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCC
Confidence 47899999999998877666554 888999999999 7899999999999999999999998886 77899999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCceee--------------eecccceeEEEEeCC-CCEEEEecCCCcEEEEeCCCCCCCCcc
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLL--------------YSALGPSKCLTVTHN-MKYIVSGDGDNSLRIWPTSPQTHKDDE 145 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~--------------~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~ 145 (392)
++|++|+.||.|++||+++++.. ..+..++.+++|+|+ +..+++++.|+.| +||++........
T Consensus 111 ~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~ 189 (902)
T 2oaj_A 111 DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSF 189 (902)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEE
Confidence 99999999999999999988753 123457899999996 5789999999999 9999854322111
Q ss_pred eee---------------eccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEE--E---ec-------------
Q psy17243 146 RFT---------------VSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQV--L---VG------------- 192 (392)
Q Consensus 146 ~~~---------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~---~~------------- 192 (392)
... ..|...|.+++|+|++++|++++.||.|++||+++++++.. + ..
T Consensus 190 ~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~ 269 (902)
T 2oaj_A 190 IYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSST 269 (902)
T ss_dssp CCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSS
T ss_pred ecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCcc
Confidence 100 12357799999999999999999999999999999887654 2 11
Q ss_pred CCCceeEEEEecC----CCcEEEEecCC-----CeEEEEECC------------------CCceeeeec-ccccceeEEE
Q psy17243 193 HTDHVSCVAVAVT----NKSLVVSGSKD-----SNLIVWDME------------------TGGEEHFLA-GHLGCVTCVK 244 (392)
Q Consensus 193 ~~~~v~~~~~~~~----~~~~l~~~~~d-----g~i~iwd~~------------------~~~~~~~~~-~~~~~v~~~~ 244 (392)
|...|++++|++. ++.+|++|+.| ..+.+|++. +++....+. .+...|..+.
T Consensus 270 ~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 349 (902)
T 2oaj_A 270 NAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNIL 349 (902)
T ss_dssp CCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEE
T ss_pred ccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEE
Confidence 3457999999742 23678888665 378999852 222233332 2344555555
Q ss_pred Ec--------------------CCCeEEEEcCCCCCCCCCCCc-cccccccccccceeEEE-------------------
Q psy17243 245 LA--------------------GDGTVAMSDLPPSRPAGPKRP-LRRLLKKEVSLDTYTWQ------------------- 284 (392)
Q Consensus 245 ~~--------------------~dg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------------- 284 (392)
+. .||.+.+++...+........ ...+......+....+.
T Consensus 350 ~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~ 429 (902)
T 2oaj_A 350 PIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDY 429 (902)
T ss_dssp ECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCC
T ss_pred ECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCC
Confidence 43 345566665533211110000 00000000011111100
Q ss_pred eccCCcceeEEEeecccccceeEEEeeccccceecceeccC------------------CCC------CCChhhhhhhcc
Q psy17243 285 RKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNV------------------GSQ------GLGPEQAALAQS 340 (392)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~------------------~~~------~~s~dg~~la~s 340 (392)
...||.... ..+...++++++++++.|+++++|..... ++. +|+|||++|| +
T Consensus 430 ~l~G~~~~v---~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LA-s 505 (902)
T 2oaj_A 430 LLKGGVRTK---RQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELA-V 505 (902)
T ss_dssp SCCCSBCCC---CCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEE-E
T ss_pred cccCCcCCC---CcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEE-E
Confidence 011222111 12234568999999999999999985321 222 8999999999 9
Q ss_pred cChHHHHHHhhCCCCCCcc-----------------------------------------cccccc-ccccCcccccccc
Q psy17243 341 QHFDQLEALWNKKSPPRSR-----------------------------------------RFEHSM-SKQNSYSSRQHSV 378 (392)
Q Consensus 341 ~~~d~~i~~Wd~~~~~~~~-----------------------------------------~~~~~~-~~~~~~~~~~fsp 378 (392)
|+.|++|+|||+.+++... .....+ .+...+.+++|||
T Consensus 506 gs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp 585 (902)
T 2oaj_A 506 SIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN 585 (902)
T ss_dssp EETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB
T ss_pred EecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC
Confidence 9999999999998663100 001112 2455688899999
Q ss_pred CccCCCCccccc
Q psy17243 379 DTDELSSPVDEF 390 (392)
Q Consensus 379 dg~~l~~~~~d~ 390 (392)
|| +||+|+.|.
T Consensus 586 dG-~lAsgs~D~ 596 (902)
T 2oaj_A 586 IG-FVGIAYAAG 596 (902)
T ss_dssp TS-EEEEEETTS
T ss_pred Cc-EEEEEeCCC
Confidence 99 999998874
No 24
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-42 Score=302.68 Aligned_cols=237 Identities=16% Similarity=0.269 Sum_probs=200.4
Q ss_pred ccceeeeccCCcCeeEEEe-----cC-CCCeEEEEeCCCeEEEEeCCCC-------ceeEEecccccceEEEEEecCCCE
Q psy17243 16 HELQSTMEGHLNTVSCVAI-----SP-NSIFAVSGSEDNTAKVWGLTLG-------SVVSTFKSHQSTILAVAVLSDSRR 82 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~-----~~-~~~~l~~~~~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~ 82 (392)
.+....+++|...|++++| ++ ++++|++|+.|++|++||+.+. .....+.+|...|.+++|+|++.+
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 3456778999999999999 77 8999999999999999998753 456778899999999999999999
Q ss_pred EEEEeCCCeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEE
Q psy17243 83 VVTSDKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFT 159 (392)
Q Consensus 83 l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~ 159 (392)
+++++.|+.|++||+++++.+.. +...+.+++|+|++++|++++.|+.|++||+.... .........|...|.+++
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeee
Confidence 99999999999999999887654 45578999999999999999999999999986221 111111125788899999
Q ss_pred EEcCC----------CEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCC-c
Q psy17243 160 VTWDS----------QYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG-G 228 (392)
Q Consensus 160 ~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~ 228 (392)
|+|++ .+|++++.|+.|++|| .+.+....+.+|...|.+++|+ +++.+|++|+.||.|++||+.+. .
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s-~~g~~l~sgs~dg~v~iwd~~~~~~ 247 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSIS-PNGKYIATGGKDKKLLIWDILNLTY 247 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTCEEEEEESSCCSS
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEEC-CCCCEEEEEcCCCeEEEEECCCCcc
Confidence 99986 7999999999999999 5567788889999999999999 78899999999999999999543 3
Q ss_pred eeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 229 EEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 229 ~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
....+ .+...|.+++|+|++.+++.+.
T Consensus 248 ~~~~~-~~~~~v~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 248 PQREF-DAGSTINQIAFNPKLQWVAVGT 274 (343)
T ss_dssp CSEEE-ECSSCEEEEEECSSSCEEEEEE
T ss_pred cceee-cCCCcEEEEEECCCCCEEEEEC
Confidence 43343 3556799999999999888764
No 25
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.3e-42 Score=298.49 Aligned_cols=239 Identities=23% Similarity=0.372 Sum_probs=207.0
Q ss_pred CCccceeeeccCCcCeeEEEecCC-CCeEEEEeCCCeEEEEeCCCCc-----eeEEecccccceEEEEEecCCCEEEEEe
Q psy17243 14 NSHELQSTMEGHLNTVSCVAISPN-SIFAVSGSEDNTAKVWGLTLGS-----VVSTFKSHQSTILAVAVLSDSRRVVTSD 87 (392)
Q Consensus 14 ~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 87 (392)
++.++..+|++|.+.|++++|+|+ +++|+||+.|++|+|||+.+.+ +...+.+|...|.+++|+|++++|++++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 455677789999999999999997 6899999999999999987653 4677889999999999999999999999
Q ss_pred CCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCC
Q psy17243 88 KAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDS 164 (392)
Q Consensus 88 ~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 164 (392)
.|+.|++|+.......... ........+++++++|++++.|+.+++||..... ........|...+..++|++++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC--KYTVQDESHSEWVSCVRFSPNS 183 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE--EEEECSSSCSSCEEEEEECSCS
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc--eEEEEeccccCcccceEEccCC
Confidence 9999999999988765443 3466788899999999999999999999986322 1222334678899999998864
Q ss_pred --CEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeE
Q psy17243 165 --QYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTC 242 (392)
Q Consensus 165 --~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 242 (392)
.++++++.|+.|++||+++++.+..+.+|...|++++|+ +++.+|++++.||.|++||+++.+.+..+.. ...|.+
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~ 261 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS-PDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINA 261 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEE
T ss_pred CCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEEC-CCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEe
Confidence 578899999999999999999999999999999999999 6788999999999999999999999888874 468999
Q ss_pred EEEcCCCeEEEEcC
Q psy17243 243 VKLAGDGTVAMSDL 256 (392)
Q Consensus 243 ~~~~~dg~~~~~~~ 256 (392)
+.|+|++.+++.+.
T Consensus 262 ~~~~~~~~~~~~~~ 275 (340)
T 4aow_A 262 LCFSPNRYWLCAAT 275 (340)
T ss_dssp EEECSSSSEEEEEE
T ss_pred eecCCCCceeeccC
Confidence 99999998877653
No 26
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-43 Score=309.10 Aligned_cols=245 Identities=15% Similarity=0.172 Sum_probs=190.0
Q ss_pred CeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeC------CCeEEEEeCCCCcee----EEecccccceEEEE
Q psy17243 6 CLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSE------DNTAKVWGLTLGSVV----STFKSHQSTILAVA 75 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~------dg~v~iwd~~~~~~~----~~~~~~~~~v~~~~ 75 (392)
.....|++... ....|...|++++|+|||++|++++. |+.|++|+..++... .....|...|.+++
T Consensus 26 ~~~~~w~~p~~----~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~ 101 (357)
T 4g56_B 26 SKGSAWGRPVT----APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVA 101 (357)
T ss_dssp ------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEE
T ss_pred ccccccCCCCC----CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEE
Confidence 34455555432 23469999999999999999999997 788999998877543 33446888999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEcCCceeee-------ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceee
Q psy17243 76 VLSDSRRVVTSDKAGVIAVWVADNAQLLY-------SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFT 148 (392)
Q Consensus 76 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 148 (392)
|+|+++ +++++.||.|++||+.+++.+. .+...+.+++|+|++++|++++.|+.|++||+++. ......
T Consensus 102 ~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~---~~~~~~ 177 (357)
T 4g56_B 102 WVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQK---AVLKSY 177 (357)
T ss_dssp EETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTT---EEEEEE
T ss_pred EcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---cEEEEE
Confidence 999874 6678889999999998876432 34568999999999999999999999999999743 344455
Q ss_pred eccccceEEEEEEcCCC-EEEEeeCCCcEEEEEcCCCeEEEEEe--cCCCceeEEEEecCCCcEEEEecCCCeEEEEECC
Q psy17243 149 VSHSEEITCFTVTWDSQ-YLITGSRDMSLKVWQVVGGKLAQVLV--GHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDME 225 (392)
Q Consensus 149 ~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 225 (392)
..|...|.+++|++++. ++++++.|+.|++||++++++...+. .|...+++++|+|.++.+|++|+.|+.|++||++
T Consensus 178 ~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 178 NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 57899999999999874 78999999999999999988766543 4667899999998788899999999999999999
Q ss_pred CCceeeeecccccceeEEEEcCCC-eEEEEcCCC
Q psy17243 226 TGGEEHFLAGHLGCVTCVKLAGDG-TVAMSDLPP 258 (392)
Q Consensus 226 ~~~~~~~~~~~~~~v~~~~~~~dg-~~~~~~~~~ 258 (392)
+++++..+.+|...|++++|+|++ ++++++..+
T Consensus 258 ~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 258 NPDSAQTSAVHSQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp CGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT
T ss_pred CCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC
Confidence 999999999999999999999987 567776544
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.1e-40 Score=291.80 Aligned_cols=252 Identities=20% Similarity=0.302 Sum_probs=224.6
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCC------ceeEEecccccceEEE
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLG------SVVSTFKSHQSTILAV 74 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~------~~~~~~~~~~~~v~~~ 74 (392)
||+.||+|++||..+++....+..|...|.+++|+|++.+|++++.|+.+++|++... .....+..|...|.++
T Consensus 81 s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 160 (354)
T 2pbi_B 81 SSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSAC 160 (354)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEE
T ss_pred EEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEE
Confidence 5789999999999999999999999999999999999999999999999999998644 3456677899999999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEcCCceeeeecc---cceeEEEEeC--CCCEEEEecCCCcEEEEeCCCCCCCCcceeee
Q psy17243 75 AVLSDSRRVVTSDKAGVIAVWVADNAQLLYSAL---GPSKCLTVTH--NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTV 149 (392)
Q Consensus 75 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 149 (392)
.|+|++..|++++.|++|++||+++++.+..+. ..+.++.++| ++++|++++.|+.|++||+++. .......
T Consensus 161 ~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~---~~~~~~~ 237 (354)
T 2pbi_B 161 SFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG---QCVQAFE 237 (354)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC---CEEEEEC
T ss_pred EEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC---cEEEEec
Confidence 999999999999999999999999998776544 4678888877 5689999999999999999854 3344456
Q ss_pred ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecC--CCceeEEEEecCCCcEEEEecCCCeEEEEECCCC
Q psy17243 150 SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGH--TDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 150 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
.|...|.+++|+|++++|++++.|++|++||+++++.+..+..+ ...+.+++|+ +++.+|++|+.|+.|++||+.++
T Consensus 238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s-~~g~~l~~g~~d~~i~vwd~~~~ 316 (354)
T 2pbi_B 238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFS-LSGRLLFAGYNDYTINVWDVLKG 316 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEe-CCCCEEEEEECCCcEEEEECCCC
Confidence 78999999999999999999999999999999999887777543 3478899999 78889999999999999999999
Q ss_pred ceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 228 GEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 228 ~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+.+..+.+|...|.+++|+|||++++++.
T Consensus 317 ~~~~~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 317 SRVSILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp SEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred ceEEEEECCCCcEEEEEECCCCCEEEEEc
Confidence 99999999999999999999999888764
No 28
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.6e-41 Score=343.59 Aligned_cols=340 Identities=20% Similarity=0.238 Sum_probs=275.3
Q ss_pred cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCc---
Q psy17243 24 GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNA--- 100 (392)
Q Consensus 24 ~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--- 100 (392)
+|...|.+++|+|+++++++++.||.|++||+.++..+..+.+|...|.+++|+|+++.|++++.|+.|++|++.+.
T Consensus 838 ~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~ 917 (1249)
T 3sfz_A 838 GHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKN 917 (1249)
T ss_dssp SSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSC
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcccccee
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999997532
Q ss_pred -------------------------------------eeeeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCC
Q psy17243 101 -------------------------------------QLLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKD 143 (392)
Q Consensus 101 -------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 143 (392)
.........+.+++++|+++++++|+.+|.|++||+.+. .
T Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~---~ 994 (1249)
T 3sfz_A 918 SAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNN---R 994 (1249)
T ss_dssp CSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTT---S
T ss_pred eeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCC---c
Confidence 111122346789999999999999999999999999744 3
Q ss_pred cceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEE
Q psy17243 144 DERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWD 223 (392)
Q Consensus 144 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 223 (392)
.......|...|.+++|+|++++|++++.||.|++||+.+++... +..|...+.+++|+| + ..+++++.||.|++||
T Consensus 995 ~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~-~-~~l~~~~~dg~v~vwd 1071 (1249)
T 3sfz_A 995 VFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQ-D-SRLLSWSFDGTVKVWN 1071 (1249)
T ss_dssp CEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEEC-CBCCSSCEEEEEECS-S-SEEEEEESSSEEEEEE
T ss_pred eeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEE-EecCCCcEEEEEEcC-C-CcEEEEECCCcEEEEE
Confidence 344455789999999999999999999999999999999988764 557999999999994 4 4678889999999999
Q ss_pred CCCCceeeeecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeeccccc
Q psy17243 224 METGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERL 303 (392)
Q Consensus 224 ~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (392)
+.+++.+..+.+|...|.+++|+|||++++++..++....+........ ....+|...+..+ ...+
T Consensus 1072 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~-----------~~l~~h~~~v~~~---~~s~ 1137 (1249)
T 3sfz_A 1072 VITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPL-----------HELKGHNGCVRCS---AFSL 1137 (1249)
T ss_dssp TTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCS-----------BCCCCCSSCEEEE---EECS
T ss_pred CCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCccee-----------eeeccCCCcEEEE---EECC
Confidence 9999999999999999999999999999999887665544332211111 0112333333332 3355
Q ss_pred ceeEEEeeccccceecceeccC----------------CC---C---CCChhhhhhhcccChHHHHHHhhCCCCCCcccc
Q psy17243 304 KRRFSVSASMEEISKIPIKDNV----------------GS---Q---GLGPEQAALAQSQHFDQLEALWNKKSPPRSRRF 361 (392)
Q Consensus 304 ~~~~~~s~s~d~~~~~~~~~~~----------------~~---~---~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~ 361 (392)
++.++++++.|+.+++|..... ++ + +|+|||++|+ +++ |.|++||+.++.....
T Consensus 1138 dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~-s~~--g~v~vwd~~~g~~~~~- 1213 (1249)
T 3sfz_A 1138 DGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLV-SAG--GYLKWWNVATGDSSQT- 1213 (1249)
T ss_dssp SSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEE-EES--SSEEEBCSSSCBCCCC-
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEE-ECC--CeEEEEECCCCceeee-
Confidence 7889999999999999975421 11 1 8999999998 654 8999999988876322
Q ss_pred ccccccccCccccccccCccCCCCcccc
Q psy17243 362 EHSMSKQNSYSSRQHSVDTDELSSPVDE 389 (392)
Q Consensus 362 ~~~~~~~~~~~~~~fspdg~~l~~~~~d 389 (392)
...+...+.+++|||||++|++++.|
T Consensus 1214 --~~~~~~~i~~~~~s~dg~~l~~~~~d 1239 (1249)
T 3sfz_A 1214 --FYTNGTNLKKIHVSPDFRTYVTVDNL 1239 (1249)
T ss_dssp --CCCSSCCCCCCEECSSSCCEEEECTT
T ss_pred --eeccCCcccEEEECCCCCEEEEecCC
Confidence 12234557779999999999988776
No 29
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-41 Score=320.25 Aligned_cols=372 Identities=13% Similarity=0.124 Sum_probs=282.1
Q ss_pred CCccCCeEEEEECCCc--------cceeeeccCCcCeeEEEecCCCCeEEEEeCC----CeEEEEeCCCCceeEEecccc
Q psy17243 1 MGGMDCLVNVWQMNSH--------ELQSTMEGHLNTVSCVAISPNSIFAVSGSED----NTAKVWGLTLGSVVSTFKSHQ 68 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----g~v~iwd~~~~~~~~~~~~~~ 68 (392)
+|+.||.|++||+.++ +....+..|...|.+++|+|++++|++++.+ +.|.+|| .++.+..+..|.
T Consensus 83 s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~ 160 (615)
T 1pgu_A 83 SGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHS 160 (615)
T ss_dssp EEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCS
T ss_pred EecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCC
Confidence 4678999999999754 7777888899999999999999999999987 6888887 678889999999
Q ss_pred cceEEEEEecCCC-EEEEEeCCCeEEEEEcCCceeeeecc---c---ceeEEEEeCC-CCEEEEecCCCcEEEEeCCCCC
Q psy17243 69 STILAVAVLSDSR-RVVTSDKAGVIAVWVADNAQLLYSAL---G---PSKCLTVTHN-MKYIVSGDGDNSLRIWPTSPQT 140 (392)
Q Consensus 69 ~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~---~---~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~ 140 (392)
..|.+++|+|+++ .+++++.|+.|++||+.+++.+..+. . .+.+++|+|+ +++|++++.|+.|++||+.+.+
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 9999999999998 89999999999999999988776543 4 6889999999 9999999999999999997543
Q ss_pred CCCcceee-e---ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecC----CCceeEEEEecCCCcEEEE
Q psy17243 141 HKDDERFT-V---SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGH----TDHVSCVAVAVTNKSLVVS 212 (392)
Q Consensus 141 ~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~ 212 (392)
. .... . .|...|.+++|+ ++++|++++.|+.|++||+++++.+..+..+ ...+.++.|. ++.++++
T Consensus 241 ~---~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~ 314 (615)
T 1pgu_A 241 F---LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT--GNGRIIS 314 (615)
T ss_dssp E---EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE--ETTEEEE
T ss_pred E---eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC--CCCeEEE
Confidence 2 2222 3 788999999999 9999999999999999999999999988876 3667788875 6788999
Q ss_pred ecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCc-----------------cccccccc
Q psy17243 213 GSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRP-----------------LRRLLKKE 275 (392)
Q Consensus 213 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 275 (392)
++.||.|++||+.+++.+..+.+|...|.+++| |+ ++++..++....+... ...+....
T Consensus 315 ~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~ 390 (615)
T 1pgu_A 315 LSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSIS 390 (615)
T ss_dssp EETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEE
T ss_pred EECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEe
Confidence 999999999999999999999999999999999 76 3333332222111100 00000000
Q ss_pred cccceeEEEec----------------------------------cCCcceeEE----EeecccccceeEEEeecc-ccc
Q psy17243 276 VSLDTYTWQRK----------------------------------YGHLTSSIM----MAAVDERLKRRFSVSASM-EEI 316 (392)
Q Consensus 276 ~~~~~~~~~~~----------------------------------~~~~~~~~~----~~~~~~~~~~~~~~s~s~-d~~ 316 (392)
..-....|... .+.....+. ....... +.++++++. |+.
T Consensus 391 ~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~ 468 (615)
T 1pgu_A 391 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNT 468 (615)
T ss_dssp TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSC
T ss_pred CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCe
Confidence 00001111110 110000000 0000000 567888988 999
Q ss_pred eecceecc--------CCCC------CCChhhhhhhcccChHHHHHHhhCCCCCCccccccccc-cccCcccccccc---
Q psy17243 317 SKIPIKDN--------VGSQ------GLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFEHSMS-KQNSYSSRQHSV--- 378 (392)
Q Consensus 317 ~~~~~~~~--------~~~~------~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~-~~~~~~~~~fsp--- 378 (392)
+++|.... .++. +|+|||++|+ +++.|+.|++||+.+++....+ .. +...+..++|+|
T Consensus 469 i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~~dg~i~iw~~~~~~~~~~~---~~~h~~~v~~~~~sp~~~ 544 (615)
T 1pgu_A 469 IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA-AGDVMGKILLYDLQSREVKTSR---WAFRTSKINAISWKPAEK 544 (615)
T ss_dssp EEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEECC---SCCCSSCEEEEEECCCC-
T ss_pred EEEEECCCccccccccCCccCceEEEEECCCCCEEE-EcCCCCeEEEeeCCCCcceeEe---ecCCCCceeEEEEcCccc
Confidence 99987531 1222 8999999999 9999999999999887763321 11 455688899999
Q ss_pred -------CccCCCCccccc
Q psy17243 379 -------DTDELSSPVDEF 390 (392)
Q Consensus 379 -------dg~~l~~~~~d~ 390 (392)
||++||+++.|.
T Consensus 545 ~~~~~~~~~~~l~~~~~dg 563 (615)
T 1pgu_A 545 GANEEEIEEDLVATGSLDT 563 (615)
T ss_dssp -----CCSCCEEEEEETTS
T ss_pred cccccccCCCEEEEEcCCC
Confidence 999999988774
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-42 Score=311.09 Aligned_cols=231 Identities=15% Similarity=0.256 Sum_probs=198.0
Q ss_pred cCeeEEEecCCCC-eEEEE----------eCCCeEEEEeCCCCc---eeEEecccccceEEEEEecCCCEEEEEeCCCeE
Q psy17243 27 NTVSCVAISPNSI-FAVSG----------SEDNTAKVWGLTLGS---VVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVI 92 (392)
Q Consensus 27 ~~v~~~~~~~~~~-~l~~~----------~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 92 (392)
..|.+++|+|+++ +|+++ +.|+.|++||+.+++ .+..+ .|...|.+++|+|++++|++++.|+.|
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeE
Confidence 4688999999987 89999 889999999999876 34444 488999999999999999999999999
Q ss_pred EEEEcCC----ceeee---ecccceeEEEEeCC-CCEEEEecCCCcEEEEeCCCCC------CCCcceeeeccccceEEE
Q psy17243 93 AVWVADN----AQLLY---SALGPSKCLTVTHN-MKYIVSGDGDNSLRIWPTSPQT------HKDDERFTVSHSEEITCF 158 (392)
Q Consensus 93 ~iwd~~~----~~~~~---~~~~~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~------~~~~~~~~~~~~~~v~~~ 158 (392)
++||+.+ .+.+. .+...+.+++|+|+ +++|++++.|+.|++||+.... ..........|...|.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 9999987 33433 34568899999998 8999999999999999998665 222222234688999999
Q ss_pred EEEcC-CCEEEEeeCCCcEEEEEcCCCeEEEEEecC------CCceeEEEEecCCCcEEEEecCCC---eEEEEECCCC-
Q psy17243 159 TVTWD-SQYLITGSRDMSLKVWQVVGGKLAQVLVGH------TDHVSCVAVAVTNKSLVVSGSKDS---NLIVWDMETG- 227 (392)
Q Consensus 159 ~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~- 227 (392)
+|+|+ +.+|++++.|+.|++||+++++.+..+..+ ...+.+++|+|.+..++++++.|+ .|++||++++
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 99999 789999999999999999999999888876 789999999966668999999998 9999999986
Q ss_pred ceeeeec-ccccceeEEEEcC-CCeEEEEcCCC
Q psy17243 228 GEEHFLA-GHLGCVTCVKLAG-DGTVAMSDLPP 258 (392)
Q Consensus 228 ~~~~~~~-~~~~~v~~~~~~~-dg~~~~~~~~~ 258 (392)
+.+..+. +|...|.+++|+| ++.+++++..+
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 284 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD 284 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCC
Confidence 5677787 8999999999999 89998887644
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.1e-40 Score=291.92 Aligned_cols=244 Identities=23% Similarity=0.443 Sum_probs=212.0
Q ss_pred cCCeEEEEECCCccceeeeccCCc------------------CeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLN------------------TVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK 65 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 65 (392)
.++.+++|++.+++.+..+..|.. .|.+++|+|++++|++|+.|+.|++||+++++.+..+.
T Consensus 83 ~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~ 162 (393)
T 1erj_A 83 CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ 162 (393)
T ss_dssp CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc
Confidence 478999999999998888766542 39999999999999999999999999999999999999
Q ss_pred ccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeee--cccceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCC
Q psy17243 66 SHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYS--ALGPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHK 142 (392)
Q Consensus 66 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~ 142 (392)
+|...|.+++|+|++++|++++.|+.|++||+++++.... ....+.+++++| ++++|++++.|+.|++||+++....
T Consensus 163 ~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~ 242 (393)
T 1erj_A 163 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 242 (393)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 9999999999999999999999999999999999887654 445788999999 8999999999999999999754322
Q ss_pred Ccc----eeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCC------------eEEEEEecCCCceeEEEEecCC
Q psy17243 143 DDE----RFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGG------------KLAQVLVGHTDHVSCVAVAVTN 206 (392)
Q Consensus 143 ~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------------~~~~~~~~~~~~v~~~~~~~~~ 206 (392)
... ....+|...|.+++|+|++++|++++.|+.|++||+++. .+...+.+|...|.+++|+ ++
T Consensus 243 ~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~ 321 (393)
T 1erj_A 243 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATT-QN 321 (393)
T ss_dssp EEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEEC-GG
T ss_pred EeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEEC-CC
Confidence 211 111468899999999999999999999999999999753 3456778899999999999 67
Q ss_pred CcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCC
Q psy17243 207 KSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGD 248 (392)
Q Consensus 207 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~d 248 (392)
+.+|++|+.|+.|++||+.+++++..+.+|...|.+++|+++
T Consensus 322 ~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 322 DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp GCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCC
Confidence 889999999999999999999999999999999999999875
No 32
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-41 Score=324.49 Aligned_cols=361 Identities=11% Similarity=0.103 Sum_probs=256.1
Q ss_pred ccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCcee
Q psy17243 23 EGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQL 102 (392)
Q Consensus 23 ~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 102 (392)
.+|...|++++|+|++++||+|+.||.|+||+....+....+. |...|.+++|+| +++|++++.|+.|++||+.+++.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE
Confidence 4799999999999999999999999999999998887766665 788999999999 88999999999999999999887
Q ss_pred eeec--ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcc--------eeeeccccceEEEEEEcC-CCEEEEee
Q psy17243 103 LYSA--LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDE--------RFTVSHSEEITCFTVTWD-SQYLITGS 171 (392)
Q Consensus 103 ~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~-~~~l~~~~ 171 (392)
+..+ ...+.+++|+|+++++++|+.||.|++||++........ ....+|...|.+++|+|+ +..|++|+
T Consensus 92 ~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~ 171 (902)
T 2oaj_A 92 LTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY 171 (902)
T ss_dssp EEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe
Confidence 6544 457899999999999999999999999999754321000 112468889999999996 57899999
Q ss_pred CCCcEEEEEcCCCeEEEEEecC------------------CCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeee-
Q psy17243 172 RDMSLKVWQVVGGKLAQVLVGH------------------TDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHF- 232 (392)
Q Consensus 172 ~dg~i~i~d~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~- 232 (392)
.||.| +||+++++++..+..| ...|++++|+ +++.+|++++.||.|++||+++++++..
T Consensus 172 ~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs-pdg~~lasgs~Dg~i~lWd~~~g~~~~~r 249 (902)
T 2oaj_A 172 EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH-PNSLHIITIHEDNSLVFWDANSGHMIMAR 249 (902)
T ss_dssp SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC-TTSSEEEEEETTCCEEEEETTTCCEEEEE
T ss_pred CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc-CCCCEEEEEECCCeEEEEECCCCcEEEEE
Confidence 99999 9999999998888765 4679999999 6789999999999999999999887653
Q ss_pred -e---cc-------------cccceeEEEEc----CCC-eEEEEcCCCCCCCCCCCcccccccc--------c-------
Q psy17243 233 -L---AG-------------HLGCVTCVKLA----GDG-TVAMSDLPPSRPAGPKRPLRRLLKK--------E------- 275 (392)
Q Consensus 233 -~---~~-------------~~~~v~~~~~~----~dg-~~~~~~~~~~~~~~~~~~~~~~~~~--------~------- 275 (392)
+ .. |...|.+++|+ ||+ .+++++..+............+-.. +
T Consensus 250 ~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~ 329 (902)
T 2oaj_A 250 TVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYA 329 (902)
T ss_dssp CSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHH
T ss_pred eecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhc
Confidence 2 11 34579999995 554 5666663322111000000000000 0
Q ss_pred cccceeEEEeccCCcceeEEEeecc-------cccceeEEEeeccccceecceec-------------------------
Q psy17243 276 VSLDTYTWQRKYGHLTSSIMMAAVD-------ERLKRRFSVSASMEEISKIPIKD------------------------- 323 (392)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~s~s~d~~~~~~~~~------------------------- 323 (392)
.......+ ..++...+..+.... ...+...+++++.|+.+++|...
T Consensus 330 ~~~~~~~~--~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~ 407 (902)
T 2oaj_A 330 NPKQMKIF--PLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTS 407 (902)
T ss_dssp SCSEEEEE--CCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEE
T ss_pred CccceEEE--ecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEE
Confidence 00000000 001111111111111 01122345555566666655421
Q ss_pred -----------------------cCC------CCCCChhhhhhhcccChHHHHHHhhCCCCCCcc--cccccc------c
Q psy17243 324 -----------------------NVG------SQGLGPEQAALAQSQHFDQLEALWNKKSPPRSR--RFEHSM------S 366 (392)
Q Consensus 324 -----------------------~~~------~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~--~~~~~~------~ 366 (392)
..| ..+|+|||++|| |++.|++||+||+.++.... .+...+ .
T Consensus 408 ~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~la-Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~ 486 (902)
T 2oaj_A 408 MAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFI-TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKA 486 (902)
T ss_dssp EEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEE-EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCS
T ss_pred EEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEE-EecCCCcEEEEECCCccccCCceEEeechhhcCCC
Confidence 011 127899999999 99999999999998875311 111111 3
Q ss_pred cccCccccccccCccCCCCccccc
Q psy17243 367 KQNSYSSRQHSVDTDELSSPVDEF 390 (392)
Q Consensus 367 ~~~~~~~~~fspdg~~l~~~~~d~ 390 (392)
+...+.+++|||||++||+|+.|.
T Consensus 487 h~~~V~svafspdg~~LAsgs~Dg 510 (902)
T 2oaj_A 487 KELAVDKISFAAETLELAVSIETG 510 (902)
T ss_dssp SSCCEEEEEEETTTTEEEEEETTS
T ss_pred CCCceeEEEecCCCCeEEEEecCc
Confidence 345688899999999999988774
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6e-40 Score=283.10 Aligned_cols=250 Identities=18% Similarity=0.314 Sum_probs=214.2
Q ss_pred CCccCCeEEEEECCC-----ccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEE
Q psy17243 1 MGGMDCLVNVWQMNS-----HELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVA 75 (392)
Q Consensus 1 tg~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 75 (392)
||+.|++|++|++.. +..+..+.+|...|.+++|+|++++|++|+.|++|++||+++++.+..+.+|...|.+++
T Consensus 35 s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~ 114 (319)
T 3frx_A 35 SASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVD 114 (319)
T ss_dssp EEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEE
Confidence 578999999999864 345678899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEcCCcee--eeecccceeEEEEeCC------CCEEEEecCCCcEEEEeCCCCCCCCccee
Q psy17243 76 VLSDSRRVVTSDKAGVIAVWVADNAQL--LYSALGPSKCLTVTHN------MKYIVSGDGDNSLRIWPTSPQTHKDDERF 147 (392)
Q Consensus 76 ~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 147 (392)
|+|++++|++++.|+.|++||++.... +..+...+.++.+.|. +..+++++.|+.|++||++.. .....
T Consensus 115 ~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---~~~~~ 191 (319)
T 3frx_A 115 IDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF---QIEAD 191 (319)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT---EEEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc---hhhee
Confidence 999999999999999999999975433 2234557888999885 458999999999999999743 33344
Q ss_pred eeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCC
Q psy17243 148 TVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 148 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
..+|...|.+++|+|++++|++++.||.|++||+++++.+..+.. ...|.+++|+ +++.++++++. +.+++|++..+
T Consensus 192 ~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~s-p~~~~la~~~~-~~i~v~~~~~~ 268 (319)
T 3frx_A 192 FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFS-PNRYWLAAATA-TGIKVFSLDPQ 268 (319)
T ss_dssp ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEEC-SSSSEEEEEET-TEEEEEEETTE
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEc-CCCCEEEEEcC-CCcEEEEeCcC
Confidence 557999999999999999999999999999999999999988875 5689999999 67788887764 56999999887
Q ss_pred ceeeeec--------ccccceeEEEEcCCCeEEEEcC
Q psy17243 228 GEEHFLA--------GHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 228 ~~~~~~~--------~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
..+..+. .|...+.+++|+|||++++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~ 305 (319)
T 3frx_A 269 YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY 305 (319)
T ss_dssp EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE
T ss_pred eeeeccCccccccccCcCcceeEEEECCCCCEEEEee
Confidence 7665543 3456788999999999888764
No 34
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.4e-40 Score=285.03 Aligned_cols=240 Identities=25% Similarity=0.369 Sum_probs=208.2
Q ss_pred ccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy17243 16 HELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVW 95 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 95 (392)
......+.+|...|++++|+|++++|++++.||.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 45567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC
Q psy17243 96 VADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR 172 (392)
Q Consensus 96 d~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 172 (392)
|+++++.+..+ ...+.++.|+|++++|++++.|+.|++||+++. ........|..+|.+++|+|++++|++++.
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC---EEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99998876544 457889999999999999999999999999743 334445578899999999999999999999
Q ss_pred CCcEEEEEcCCCeEEEEEe-cCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccccccee---EEEEcCC
Q psy17243 173 DMSLKVWQVVGGKLAQVLV-GHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVT---CVKLAGD 248 (392)
Q Consensus 173 dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~---~~~~~~d 248 (392)
|+.|++||+++++.+..+. .+...+..++|+ +++.+|++++.|+.|++||+++++.+..+.+|...+. .....++
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS-PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 248 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEEC-TTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCC
Confidence 9999999999998887764 456789999999 6788999999999999999999999988888766433 2233456
Q ss_pred CeEEEEcCCCC
Q psy17243 249 GTVAMSDLPPS 259 (392)
Q Consensus 249 g~~~~~~~~~~ 259 (392)
+.+++++..++
T Consensus 249 ~~~l~sg~~dg 259 (312)
T 4ery_A 249 GKWIVSGSEDN 259 (312)
T ss_dssp SCEEEECCTTS
T ss_pred CcEEEEECCCC
Confidence 77777765443
No 35
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.7e-41 Score=296.23 Aligned_cols=253 Identities=21% Similarity=0.320 Sum_probs=221.5
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc-------eeEEecccccceEE
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS-------VVSTFKSHQSTILA 73 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-------~~~~~~~~~~~v~~ 73 (392)
||+.||+|+|||+.+++....+..|...|.+++|+|++++|++|+.|+.+++||+.+.. ....+.+|.+.|.+
T Consensus 83 s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~ 162 (380)
T 3iz6_a 83 SASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASS 162 (380)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCC
T ss_pred EEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEE
Confidence 57899999999999999999999999999999999999999999999999999987532 34567789999999
Q ss_pred EEEecCC-CEEEEEeCCCeEEEEEcCCceeeeec--------ccceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCCC
Q psy17243 74 VAVLSDS-RRVVTSDKAGVIAVWVADNAQLLYSA--------LGPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHKD 143 (392)
Q Consensus 74 ~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~--------~~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~ 143 (392)
+.|.|++ ..|++++.|+.|++||+.+++.+..+ ...+.++.+++ ++++|++|+.|+.|++||++... .
T Consensus 163 ~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~ 240 (380)
T 3iz6_a 163 CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--R 240 (380)
T ss_dssp CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--C
T ss_pred EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--c
Confidence 9999974 57999999999999999999876543 34678888877 88999999999999999997322 2
Q ss_pred cceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCC-------ceeEEEEecCCCcEEEEecCC
Q psy17243 144 DERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTD-------HVSCVAVAVTNKSLVVSGSKD 216 (392)
Q Consensus 144 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~l~~~~~d 216 (392)
......+|...|.+++|+|++++|++++.|++|++||+++++.+..+..+.. .|++++|+ +++.+|++|+.|
T Consensus 241 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~g~~d 319 (380)
T 3iz6_a 241 AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFS-ISGRLLFAGYSN 319 (380)
T ss_dssp CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEEC-SSSSEEEEECTT
T ss_pred ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEEC-CCCCEEEEEECC
Confidence 3445567999999999999999999999999999999999999888765432 48999999 788899999999
Q ss_pred CeEEEEECCCCceeeee----cccccceeEEEEcCCCeEEEEcC
Q psy17243 217 SNLIVWDMETGGEEHFL----AGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 217 g~i~iwd~~~~~~~~~~----~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
|.|++||+.+++.+..+ .+|.+.|.+++|+|||++++++.
T Consensus 320 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 320 GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEee
Confidence 99999999999888766 67999999999999999888864
No 36
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.3e-40 Score=285.66 Aligned_cols=249 Identities=21% Similarity=0.365 Sum_probs=207.4
Q ss_pred CCccCCeEEEEECCCc-------cceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEE
Q psy17243 1 MGGMDCLVNVWQMNSH-------ELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILA 73 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~ 73 (392)
||+.|++|++||+.+. .....+.+|...|.+++|+|++.+|++++.|++|++||+++++.+..+.+|...|.+
T Consensus 44 sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~ 123 (343)
T 2xzm_R 44 SGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYS 123 (343)
T ss_dssp EEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEE
T ss_pred EEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEE
Confidence 5789999999998643 456678899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCCceeee-----ecccceeEEEEeCCC----------CEEEEecCCCcEEEEeCCC
Q psy17243 74 VAVLSDSRRVVTSDKAGVIAVWVADNAQLLY-----SALGPSKCLTVTHNM----------KYIVSGDGDNSLRIWPTSP 138 (392)
Q Consensus 74 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~----------~~l~~~~~d~~i~~~d~~~ 138 (392)
++|+|++++|++++.|+.|++||+....... .+...+.++.|+|++ .++++++.|+.|++||..
T Consensus 124 v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~- 202 (343)
T 2xzm_R 124 VAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN- 202 (343)
T ss_dssp EEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-
T ss_pred EEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-
Confidence 9999999999999999999999998543322 234568899999986 799999999999999953
Q ss_pred CCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCC-CeEEEEEecCCCceeEEEEecCCCcEEEEecCCC
Q psy17243 139 QTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVG-GKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDS 217 (392)
Q Consensus 139 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 217 (392)
.........|...|.+++|+|++++|++++.|+.|++||+.+ ......+. +...|.+++|+ +++.+++++ .|+
T Consensus 203 ---~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~s-p~~~~la~~-~d~ 276 (343)
T 2xzm_R 203 ---FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFN-PKLQWVAVG-TDQ 276 (343)
T ss_dssp ---TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEEC-SSSCEEEEE-ESS
T ss_pred ---CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEEC-CCCCEEEEE-CCC
Confidence 233344557899999999999999999999999999999954 34444443 56679999999 566776654 588
Q ss_pred eEEEEECCCCceee--eec-----------ccccceeEEEEcCCCeEEEEcC
Q psy17243 218 NLIVWDMETGGEEH--FLA-----------GHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 218 ~i~iwd~~~~~~~~--~~~-----------~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.|++||+.+++... .+. +|...|.+++|+|+|++++++.
T Consensus 277 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 277 GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 89999998776543 333 5777889999999988777753
No 37
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=286.31 Aligned_cols=225 Identities=21% Similarity=0.237 Sum_probs=195.9
Q ss_pred CCccCCeEEEEECCCccceee----eccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEE
Q psy17243 1 MGGMDCLVNVWQMNSHELQST----MEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAV 76 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~ 76 (392)
+|+.||.|+|||+.+++.... +.+|...|++++|+|++++|++|+.|++|++||+++++++..+.+|...|.+++|
T Consensus 98 ~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~ 177 (344)
T 4gqb_B 98 VASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAA 177 (344)
T ss_dssp EEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEe
Confidence 478999999999998876654 3479999999999999999999999999999999999999999999999999999
Q ss_pred ecCCC-EEEEEeCCCeEEEEEcCCceeeeecc-----cceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCCCcceeee
Q psy17243 77 LSDSR-RVVTSDKAGVIAVWVADNAQLLYSAL-----GPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTV 149 (392)
Q Consensus 77 ~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 149 (392)
+|++. .|++++.|+.|++||+++++....+. ..+.+++++| ++++|++|+.|+.|++||+++.+ ......
T Consensus 178 ~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~---~~~~~~ 254 (344)
T 4gqb_B 178 SPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS---CVLSSA 254 (344)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----CCEEEE
T ss_pred cCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc---EEEEEc
Confidence 99885 78999999999999999998766543 2467899998 45788999999999999998543 344556
Q ss_pred ccccceEEEEEEcCC-CEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCc
Q psy17243 150 SHSEEITCFTVTWDS-QYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGG 228 (392)
Q Consensus 150 ~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 228 (392)
.|...|++++|+|++ ++|++++.|++|++||+++++.. .+.+|...|++++|+|.+..+|++++.|++|++|++.+..
T Consensus 255 ~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 255 VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 899999999999997 57999999999999999988765 5688999999999997777889999999999999998654
Q ss_pred e
Q psy17243 229 E 229 (392)
Q Consensus 229 ~ 229 (392)
.
T Consensus 334 ~ 334 (344)
T 4gqb_B 334 L 334 (344)
T ss_dssp -
T ss_pred C
Confidence 3
No 38
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-41 Score=300.47 Aligned_cols=252 Identities=14% Similarity=0.258 Sum_probs=219.7
Q ss_pred CCccCCeEEEEEC----CCcc------ceeeecc----------CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCce
Q psy17243 1 MGGMDCLVNVWQM----NSHE------LQSTMEG----------HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSV 60 (392)
Q Consensus 1 tg~~dg~i~vwd~----~~~~------~~~~~~~----------h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 60 (392)
+|+.||.|++|++ .+++ ....+.. |...|++++|+|++++|++++.||.|++|| .+++.
T Consensus 63 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~ 141 (425)
T 1r5m_A 63 YGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGAL 141 (425)
T ss_dssp EEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCE
T ss_pred EecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCe
Confidence 4678999999999 8887 4555544 688999999999999999999999999999 77888
Q ss_pred eEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeeccc---c---------------eeEEEEeCCCCEE
Q psy17243 61 VSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSALG---P---------------SKCLTVTHNMKYI 122 (392)
Q Consensus 61 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~---------------~~~~~~~~~~~~l 122 (392)
+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.. . +.++.+++++ .+
T Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 220 (425)
T 1r5m_A 142 LNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KF 220 (425)
T ss_dssp EEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT-EE
T ss_pred eeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EE
Confidence 999999999999999999999999999999999999999987765443 2 7788898875 58
Q ss_pred EEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEE
Q psy17243 123 VSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAV 202 (392)
Q Consensus 123 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 202 (392)
++++.++.|++||+... ........|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|
T Consensus 221 ~~~~~~g~i~~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 297 (425)
T 1r5m_A 221 VIPGPKGAIFVYQITEK---TPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASW 297 (425)
T ss_dssp EEECGGGCEEEEETTCS---SCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEE
T ss_pred EEEcCCCeEEEEEcCCC---ceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEE
Confidence 88999999999999854 333444578899999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCCCC
Q psy17243 203 AVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPS 259 (392)
Q Consensus 203 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~ 259 (392)
+| ++ ++++++.|+.|++||+++++.+..+..|...|.+++|+|++++++++..++
T Consensus 298 ~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 352 (425)
T 1r5m_A 298 VG-DD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG 352 (425)
T ss_dssp ET-TT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS
T ss_pred CC-CC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC
Confidence 94 55 899999999999999999999999999999999999999999999886543
No 39
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.6e-40 Score=290.99 Aligned_cols=248 Identities=16% Similarity=0.160 Sum_probs=203.3
Q ss_pred CCeEEEEECCCcccee----eeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeE----EecccccceEEEEE
Q psy17243 5 DCLVNVWQMNSHELQS----TMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVS----TFKSHQSTILAVAV 76 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~----~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~----~~~~~~~~v~~~~~ 76 (392)
|+.|++|+..++.... ...+|...|.+++|+|++. +++++.||+|+|||+.+++... ...+|...|.+++|
T Consensus 69 d~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~ 147 (357)
T 4g56_B 69 GGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSV 147 (357)
T ss_dssp CEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEE
T ss_pred cCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEE
Confidence 7899999987765433 3456999999999999986 5567789999999998886543 34478999999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCC-EEEEecCCCcEEEEeCCCCCCCCcceeeeccc
Q psy17243 77 LSDSRRVVTSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQTHKDDERFTVSHS 152 (392)
Q Consensus 77 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 152 (392)
+|++++|++++.|+.|++||+++++.+..+ ...+.+++|++++. ++++++.|+.|++||+++.+...... ...+.
T Consensus 148 spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~-~~~~~ 226 (357)
T 4g56_B 148 FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID-FCASD 226 (357)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC-CTTCC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee-ecccc
Confidence 999999999999999999999999887665 45788999999875 78999999999999998654433322 23567
Q ss_pred cceEEEEEEcC-CCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceee
Q psy17243 153 EEITCFTVTWD-SQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 153 ~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 231 (392)
..+.+++|+|+ +.+|++|+.|+.|++||+++++++..+.+|...|++++|+|.++.+|++++.|++|+|||+++++.+.
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 78999999997 56899999999999999999999999999999999999997777899999999999999999988776
Q ss_pred eecccccceeEEEEcC-CCeEEEEc
Q psy17243 232 FLAGHLGCVTCVKLAG-DGTVAMSD 255 (392)
Q Consensus 232 ~~~~~~~~v~~~~~~~-dg~~~~~~ 255 (392)
.+ +|...|++++|+| |+.+++++
T Consensus 307 ~~-~H~~~V~~vafsP~d~~~l~s~ 330 (357)
T 4g56_B 307 DL-SHRDFVTGVAWSPLDHSKFTTV 330 (357)
T ss_dssp EC-CCSSCEEEEEECSSSTTEEEEE
T ss_pred EC-CCCCCEEEEEEeCCCCCEEEEE
Confidence 55 7999999999998 77777765
No 40
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=287.02 Aligned_cols=253 Identities=19% Similarity=0.267 Sum_probs=209.5
Q ss_pred CCccCCeEEEEECCCcccee---eeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCC--ceeEEecccccceEEEE
Q psy17243 1 MGGMDCLVNVWQMNSHELQS---TMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLG--SVVSTFKSHQSTILAVA 75 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~---~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~ 75 (392)
+|+.|+.|+|||+.+++... ...+|...|.+++|+|++++|++|+.|++|++|++..+ +++..+.+|...|.+++
T Consensus 33 s~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~ 112 (345)
T 3fm0_A 33 SCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA 112 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEE
T ss_pred EEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEE
Confidence 57899999999998775432 23679999999999999999999999999999998876 45778899999999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEcCCcee---e---eecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeee
Q psy17243 76 VLSDSRRVVTSDKAGVIAVWVADNAQL---L---YSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTV 149 (392)
Q Consensus 76 ~~~~~~~l~~~~~d~~i~iwd~~~~~~---~---~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 149 (392)
|+|++++|++++.|+.|++||+.++.. + ..+...+.+++|+|++++|++++.|+.|++||.+.... .......
T Consensus 113 ~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~-~~~~~~~ 191 (345)
T 3fm0_A 113 WAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW-VCCATLE 191 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE-EEEEEEC
T ss_pred EeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE-EEEEEec
Confidence 999999999999999999999987632 2 23456789999999999999999999999999864321 1223445
Q ss_pred ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCC---------------eEEEEEec-CCCceeEEEEecCCCcEEEEe
Q psy17243 150 SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGG---------------KLAQVLVG-HTDHVSCVAVAVTNKSLVVSG 213 (392)
Q Consensus 150 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~ 213 (392)
+|...|.+++|+|++++|++++.|++|++||.... +++..+.+ |...|.+++|+ +++..|+++
T Consensus 192 ~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s~ 270 (345)
T 3fm0_A 192 GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWC-QLTGALATA 270 (345)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEEC-TTTCCEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEe-cCCCEEEEE
Confidence 78999999999999999999999999999997322 23444554 88899999999 667789999
Q ss_pred cCCCeEEEEECCCCce---------eeeecccccceeEEEEcCCCe-EEEEc
Q psy17243 214 SKDSNLIVWDMETGGE---------EHFLAGHLGCVTCVKLAGDGT-VAMSD 255 (392)
Q Consensus 214 ~~dg~i~iwd~~~~~~---------~~~~~~~~~~v~~~~~~~dg~-~~~~~ 255 (392)
+.|+.|++|+...+.. .....+|...|++++|+|++. +++++
T Consensus 271 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 271 CGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp ETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred eCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence 9999999999875431 123357899999999999874 66664
No 41
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3e-41 Score=317.55 Aligned_cols=372 Identities=15% Similarity=0.113 Sum_probs=275.0
Q ss_pred cCCeEEEEECCCc----cceeeeccCCcC-eeEEEecC--CCCeEEEEeCCCeEEEEeCCCC--------ceeEEecccc
Q psy17243 4 MDCLVNVWQMNSH----ELQSTMEGHLNT-VSCVAISP--NSIFAVSGSEDNTAKVWGLTLG--------SVVSTFKSHQ 68 (392)
Q Consensus 4 ~dg~i~vwd~~~~----~~~~~~~~h~~~-v~~~~~~~--~~~~l~~~~~dg~v~iwd~~~~--------~~~~~~~~~~ 68 (392)
.++.|++||+.++ +....+.+|... |++++|+| ++++|++++.||.|++||+.++ +.+..+..|.
T Consensus 37 ~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~ 116 (615)
T 1pgu_A 37 CGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA 116 (615)
T ss_dssp ETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS
T ss_pred cCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhccc
Confidence 3789999999999 899999999999 99999999 9999999999999999999754 6777888899
Q ss_pred cceEEEEEecCCCEEEEEeCC----CeEEEEEcCCceeee---ecccceeEEEEeCCCC-EEEEecCCCcEEEEeCCCCC
Q psy17243 69 STILAVAVLSDSRRVVTSDKA----GVIAVWVADNAQLLY---SALGPSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQT 140 (392)
Q Consensus 69 ~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~ 140 (392)
..|.+++|+|++++|++++.+ +.|++||. ++.+. .+...+.+++|+|+++ .+++++.|+.|++||+...
T Consensus 117 ~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~- 193 (615)
T 1pgu_A 117 GPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF- 193 (615)
T ss_dssp SCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-
T ss_pred ccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-
Confidence 999999999999999999988 68888884 33433 3455789999999998 8999999999999998733
Q ss_pred CCCcceeeecccc---ceEEEEEEcC-CCEEEEeeCCCcEEEEEcCCCeEEEEE-e---cCCCceeEEEEecCCCcEEEE
Q psy17243 141 HKDDERFTVSHSE---EITCFTVTWD-SQYLITGSRDMSLKVWQVVGGKLAQVL-V---GHTDHVSCVAVAVTNKSLVVS 212 (392)
Q Consensus 141 ~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~~ 212 (392)
........|.. .|.+++|+|+ +++|++++.|+.|++||+++++.+..+ . .|...|.+++|+ ++.+|++
T Consensus 194 --~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~ 269 (615)
T 1pgu_A 194 --KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFAT 269 (615)
T ss_dssp --EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEE
T ss_pred --ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEE
Confidence 33344456777 8999999999 999999999999999999999999998 6 899999999998 7889999
Q ss_pred ecCCCeEEEEECCCCceeeeeccc----ccceeEEEEcCCCeEEEEcCCCCCCCCCCCc----cccccccccccceeE--
Q psy17243 213 GSKDSNLIVWDMETGGEEHFLAGH----LGCVTCVKLAGDGTVAMSDLPPSRPAGPKRP----LRRLLKKEVSLDTYT-- 282 (392)
Q Consensus 213 ~~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-- 282 (392)
++.|+.|++||+++++.+..+..+ ...+.++.|+ ++.+++++..++....+... ...+......+....
T Consensus 270 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 348 (615)
T 1pgu_A 270 VGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVN 348 (615)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETT
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEec
Confidence 999999999999999998888766 4678888886 66666666544433221111 011111111111111
Q ss_pred -------------EEec---cCCcceeEEEeecccccceeEEEeeccccceecceeccCC------CCCCChh-------
Q psy17243 283 -------------WQRK---YGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVG------SQGLGPE------- 333 (392)
Q Consensus 283 -------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~------~~~~s~d------- 333 (392)
|... .+|...+..+.. .++.++++++.|+.+++|...... ..+|+|+
T Consensus 349 ~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~----~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 424 (615)
T 1pgu_A 349 PLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN----SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLT 424 (615)
T ss_dssp TTEEEETTSCEEETTTTEEECCCCSCEEEEEC----CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEE
T ss_pred CcEEECCCCeEEEEEchhhcCcccCceEEEEE----CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEe
Confidence 1000 223222222222 124467777788888877654211 0023333
Q ss_pred -------------------------------hhhhhcccCh-HHHHHHhhCCCCCCccccccccccccCccccccccCcc
Q psy17243 334 -------------------------------QAALAQSQHF-DQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTD 381 (392)
Q Consensus 334 -------------------------------g~~la~s~~~-d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~ 381 (392)
+++|+ +++. |+.|++||+.++.... .....+...+..++|||||+
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g~ 501 (615)
T 1pgu_A 425 NDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVA-VGLEEGNTIQVFKLSDLEVSF--DLKTPLRAKPSYISISPSET 501 (615)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEE-EEETTTSCEEEEETTEEEEEE--ECSSCCSSCEEEEEECTTSS
T ss_pred CCCceEEEeccCCceeeecccCCCceEEEEcCCEEE-EeecCCCeEEEEECCCccccc--cccCCccCceEEEEECCCCC
Confidence 55555 5666 8888888887654311 12223445677799999999
Q ss_pred CCCCccccc
Q psy17243 382 ELSSPVDEF 390 (392)
Q Consensus 382 ~l~~~~~d~ 390 (392)
+|++++.|.
T Consensus 502 ~l~~~~~dg 510 (615)
T 1pgu_A 502 YIAAGDVMG 510 (615)
T ss_dssp EEEEEETTS
T ss_pred EEEEcCCCC
Confidence 999987763
No 42
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-41 Score=305.67 Aligned_cols=333 Identities=14% Similarity=0.178 Sum_probs=240.4
Q ss_pred eEEEEECCCccceeeeccCCcCeeEEEecCCCC-eEEEEeCCCeEEEEeC----CCCc------eeEEecc---------
Q psy17243 7 LVNVWQMNSHELQSTMEGHLNTVSCVAISPNSI-FAVSGSEDNTAKVWGL----TLGS------VVSTFKS--------- 66 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~v~iwd~----~~~~------~~~~~~~--------- 66 (392)
.+.+|+.+..........|..+|++++|+|+++ +|++++.||.|++|++ .+++ ....+..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (425)
T 1r5m_A 26 IDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSG 105 (425)
T ss_dssp --------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC----
T ss_pred ccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccccccc
Confidence 456787766555555556779999999999999 9999999999999999 8888 4555554
Q ss_pred -cccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCC
Q psy17243 67 -HQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHK 142 (392)
Q Consensus 67 -~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 142 (392)
|...|.+++|+|++++|++++.||.|++|| .+++.+.. +...+.+++|+|++++|++++.|+.|++||+.....
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~- 183 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV- 183 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE-
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE-
Confidence 677999999999999999999999999999 45544443 456889999999999999999999999999975432
Q ss_pred Ccceeeeccccc---------------eEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCC
Q psy17243 143 DDERFTVSHSEE---------------ITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNK 207 (392)
Q Consensus 143 ~~~~~~~~~~~~---------------v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 207 (392)
......+... +.+++|++++ .+++++.++.|++||+++++.+..+..|...|.+++|+ +++
T Consensus 184 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~-~~~ 259 (425)
T 1r5m_A 184 --MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN-DTN 259 (425)
T ss_dssp --EEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE-TTT
T ss_pred --EEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC-CCC
Confidence 2222233333 8899999875 68889999999999999999999999999999999999 677
Q ss_pred cEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEecc
Q psy17243 208 SLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKY 287 (392)
Q Consensus 208 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (392)
.+|++++.|+.|++||+++++.+..+..|...|.+++|+|++ +++++..++. ...|....
T Consensus 260 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-------------------i~i~d~~~ 319 (425)
T 1r5m_A 260 KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-------------------VRLWSLKQ 319 (425)
T ss_dssp TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-------------------EEEEETTT
T ss_pred CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc-------------------EEEEECCC
Confidence 899999999999999999999999999999999999999999 6666543221 11222211
Q ss_pred CCcceeEEEeecccccceeEEEeeccccceecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCCC----------
Q psy17243 288 GHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPPR---------- 357 (392)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~---------- 357 (392)
+..... +... .......+|+|++++|+ +++.|+.|++||+.+...
T Consensus 320 ~~~~~~---------------~~~~---------~~~i~~~~~s~~~~~l~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 374 (425)
T 1r5m_A 320 NTLLAL---------------SIVD---------GVPIFAGRISQDGQKYA-VAFMDGQVNVYDLKKLNSKSRSLYGNRD 374 (425)
T ss_dssp TEEEEE---------------EECT---------TCCEEEEEECTTSSEEE-EEETTSCEEEEECHHHHC----------
T ss_pred CcEeEe---------------cccC---------CccEEEEEEcCCCCEEE-EEECCCeEEEEECCCCccceeeeecccc
Confidence 110000 0000 00001125778888877 777888888888765541
Q ss_pred ------ccccccccccc--c-CccccccccCccCCCCccccc
Q psy17243 358 ------SRRFEHSMSKQ--N-SYSSRQHSVDTDELSSPVDEF 390 (392)
Q Consensus 358 ------~~~~~~~~~~~--~-~~~~~~fspdg~~l~~~~~d~ 390 (392)
+......+..+ . .+..++|+|||++||+++.|.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 375 GILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp ----CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred cccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence 00012223322 2 677799999999999887764
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-40 Score=295.37 Aligned_cols=293 Identities=13% Similarity=0.134 Sum_probs=236.4
Q ss_pred EECCCccceeeeccCCcCeeEEEecCCC-CeEEEEeCCCeEEEEeCCCCceeEEec--ccccceEEEEEec-CCCEEEEE
Q psy17243 11 WQMNSHELQSTMEGHLNTVSCVAISPNS-IFAVSGSEDNTAKVWGLTLGSVVSTFK--SHQSTILAVAVLS-DSRRVVTS 86 (392)
Q Consensus 11 wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~ 86 (392)
|++.+.+....+.+|...|++++|+|++ ++|++|+.||.|++||+.+++....+. +|...|.+++|+| ++++|+++
T Consensus 58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 58 RSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp HHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred ccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 3445667778889999999999999998 899999999999999999888877765 5999999999999 67999999
Q ss_pred eCCCeEEEEEcCCceeeee-----cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEE
Q psy17243 87 DKAGVIAVWVADNAQLLYS-----ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVT 161 (392)
Q Consensus 87 ~~d~~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~ 161 (392)
+.|+.|++||+.+...... ....+.+++|+|++++|++++.|+.|++||++ .........|...|.+++|+
T Consensus 138 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 138 SIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD----GHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp ETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT----SCEEEEEECSSSCEEEEEEC
T ss_pred eCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC----CCEEEEeccCCCcEEEEEEC
Confidence 9999999999997543221 12458999999999999999999999999984 22344455789999999999
Q ss_pred cCCC-EEEEeeCCCcEEEEEcCC----CeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccc
Q psy17243 162 WDSQ-YLITGSRDMSLKVWQVVG----GKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGH 236 (392)
Q Consensus 162 ~~~~-~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 236 (392)
|+++ +|++++.|+.|++||+++ +.++..+ +|...|.+++|+|.++.+|++++.|+.|++||+++++.+..+..|
T Consensus 214 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 292 (383)
T 3ei3_B 214 PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH 292 (383)
T ss_dssp SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc
Confidence 9998 999999999999999997 5666666 699999999999438899999999999999999998877766654
Q ss_pred cc-------ceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEE
Q psy17243 237 LG-------CVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSV 309 (392)
Q Consensus 237 ~~-------~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (392)
.. .+. +.|+|++.+++.
T Consensus 293 ~~~~~~~~~~~~-~~~~p~~~~~~~------------------------------------------------------- 316 (383)
T 3ei3_B 293 PHRQFQHLTPIK-ATWHPMYDLIVA------------------------------------------------------- 316 (383)
T ss_dssp CBCCCTTSCCCC-CEECSSSSEEEE-------------------------------------------------------
T ss_pred cccccccccceE-EeccCCCCceEE-------------------------------------------------------
Confidence 32 222 345554444333
Q ss_pred eeccccceecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCCCccccccccccccCccccccccCccCCCCcc
Q psy17243 310 SASMEEISKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTDELSSPV 387 (392)
Q Consensus 310 s~s~d~~~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~~ 387 (392)
+|+|||++ +++.|+.|++||+.+++....+.. ......+..++|+|||++||+++
T Consensus 317 -------------------~~s~dg~~---s~s~d~~i~iwd~~~~~~~~~l~~-~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 317 -------------------GRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRD-PNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp -------------------ECBCCTTT---CTTCCCCEEEEETTTCCEEEEECB-TTBCSCCCEEEECTTSSEEEEEE
T ss_pred -------------------EecCCccc---ccCCCCeEEEEecCCCceeeeecC-CCCCceEEEEEEecCccEEEEec
Confidence 26788888 678999999999988876333211 11223344469999999999886
No 44
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.4e-40 Score=291.74 Aligned_cols=230 Identities=26% Similarity=0.428 Sum_probs=197.5
Q ss_pred cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEeccccc------------------ceEEEEEecCCCEEEE
Q psy17243 24 GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQS------------------TILAVAVLSDSRRVVT 85 (392)
Q Consensus 24 ~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~ 85 (392)
+|...|.+++|+|+|++|++++ ++.+++|++.+++.+..+..+.. .|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 5999999999999999999986 68999999999998888765532 3899999999999999
Q ss_pred EeCCCeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEc
Q psy17243 86 SDKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTW 162 (392)
Q Consensus 86 ~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~ 162 (392)
++.|+.|++||+.+++.+.. +...+.+++|+|++++|++++.|+.|++||+++... .....+...+.+++|+|
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~----~~~~~~~~~v~~~~~~~ 216 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC----SLTLSIEDGVTTVAVSP 216 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----EEEEECSSCEEEEEECS
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee----EEEEEcCCCcEEEEEEC
Confidence 99999999999999887654 445789999999999999999999999999975432 22234667899999999
Q ss_pred -CCCEEEEeeCCCcEEEEEcCCCeEEEEE-------ecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCC-------
Q psy17243 163 -DSQYLITGSRDMSLKVWQVVGGKLAQVL-------VGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG------- 227 (392)
Q Consensus 163 -~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~------- 227 (392)
++++|++++.|+.|++||+++++.+..+ .+|...|.+++|+ +++.+|++++.|+.|++||+++.
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT-RDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC-CCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 8999999999999999999999887776 5789999999999 67889999999999999999763
Q ss_pred -----ceeeeecccccceeEEEEcCCCeEEEEcCCCC
Q psy17243 228 -----GEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPS 259 (392)
Q Consensus 228 -----~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~ 259 (392)
.+...+.+|...|.+++|+|++.+++++..++
T Consensus 296 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~ 332 (393)
T 1erj_A 296 TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 332 (393)
T ss_dssp -----CEEEEEECCSSCEEEEEECGGGCEEEEEETTS
T ss_pred CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC
Confidence 34557788999999999999999999986553
No 45
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-39 Score=281.46 Aligned_cols=252 Identities=20% Similarity=0.272 Sum_probs=199.2
Q ss_pred CCccCCeEEEEECCCc--cceeee-cc-CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCC-------CceeEEeccccc
Q psy17243 1 MGGMDCLVNVWQMNSH--ELQSTM-EG-HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTL-------GSVVSTFKSHQS 69 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~--~~~~~~-~~-h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~-------~~~~~~~~~~~~ 69 (392)
+|+.|+.|++||+.++ +....+ .+ |...|.+++|+|++++|++|+.|++|+|||++. .+.+..+.+|..
T Consensus 29 s~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~ 108 (330)
T 2hes_X 29 TGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHEN 108 (330)
T ss_dssp EEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----
T ss_pred EEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCC
Confidence 5789999999999875 445555 44 999999999999999999999999999999853 356778889999
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEcCCc----eee---eecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCC
Q psy17243 70 TILAVAVLSDSRRVVTSDKAGVIAVWVADNA----QLL---YSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHK 142 (392)
Q Consensus 70 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~---~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 142 (392)
.|.+++|+|++++|++++.|+.|++||+... +.+ ..+...+.+++|+|++.+|++++.|+.|++||......
T Consensus 109 ~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~- 187 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW- 187 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe-
Confidence 9999999999999999999999999999432 233 34556789999999999999999999999999864311
Q ss_pred CcceeeeccccceEEEEEEcC--CCEEEEeeCCCcEEEEEcCCC--------eEEEEEec-CCCceeEEEEecCCCcEEE
Q psy17243 143 DDERFTVSHSEEITCFTVTWD--SQYLITGSRDMSLKVWQVVGG--------KLAQVLVG-HTDHVSCVAVAVTNKSLVV 211 (392)
Q Consensus 143 ~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~--------~~~~~~~~-~~~~v~~~~~~~~~~~~l~ 211 (392)
.......+|...|.+++|+|+ +.+|++++.|++|++||++.+ .+...+.. |...|.+++|+ ++ .+|+
T Consensus 188 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s-~~-~~l~ 265 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWG-FN-GLIA 265 (330)
T ss_dssp EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEEC-TT-SCEE
T ss_pred eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEc-CC-CEEE
Confidence 233445579999999999998 678999999999999999754 34445554 89999999999 44 4789
Q ss_pred EecCCCeEEEEECCCCc--eee-eeccccc-ceeEEEEcC--CCeEEEEc
Q psy17243 212 SGSKDSNLIVWDMETGG--EEH-FLAGHLG-CVTCVKLAG--DGTVAMSD 255 (392)
Q Consensus 212 ~~~~dg~i~iwd~~~~~--~~~-~~~~~~~-~v~~~~~~~--dg~~~~~~ 255 (392)
+++.||.|++||..+++ ... ...+|.. .|.+++|+| ++++++++
T Consensus 266 s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~ 315 (330)
T 2hes_X 266 SVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATG 315 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEE
T ss_pred EEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEe
Confidence 99999999999998764 232 3356776 899999998 56555553
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8.9e-41 Score=300.89 Aligned_cols=293 Identities=12% Similarity=0.081 Sum_probs=226.8
Q ss_pred ccceeeeccCCcCeeEEEecC-CCCeEEEEeCCCeEEEEeCCCCcee--EEecccccceEEEEEec-CCCEEEEEeCCCe
Q psy17243 16 HELQSTMEGHLNTVSCVAISP-NSIFAVSGSEDNTAKVWGLTLGSVV--STFKSHQSTILAVAVLS-DSRRVVTSDKAGV 91 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~ 91 (392)
.+.......|...|++|+|+| ++.+||+|+.||.|+|||+.+++.. ..+.+|.+.|++++|+| ++++|++++.||+
T Consensus 109 ~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 109 YRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp TTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred eeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 344555667999999999999 5679999999999999999877544 44568999999999998 6889999999999
Q ss_pred EEEEEcCCceeeeec-----ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCC-
Q psy17243 92 IAVWVADNAQLLYSA-----LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQ- 165 (392)
Q Consensus 92 i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 165 (392)
|++||++++...... ...+.++.++|++++|++|+.||.|++||++.. .......|...|.+++|+|++.
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~----~~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK----ELWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC----BCCCSBCCSSCEEEEEECTTCSS
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc----eeEEEecccceEEeeeecCCCce
Confidence 999999876543221 224578999999999999999999999998632 2233457899999999999875
Q ss_pred EEEEeeCCCcEEEEEcCCCeEEEE---EecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccc---
Q psy17243 166 YLITGSRDMSLKVWQVVGGKLAQV---LVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGC--- 239 (392)
Q Consensus 166 ~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--- 239 (392)
+|++++.|+.|++||+++.+.... ..+|...|++++|+ +++.+|++++.||.|+|||+.+++....+..|...
T Consensus 265 ~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~s-pdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 265 FLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS-PDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp EEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBC-TTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS
T ss_pred EEEEecCcceeeEEecccccccceEEEeeeccccccceeEC-CCCCeeEEEcCCCEEEEEECCCCccceEEecccccccc
Confidence 788999999999999988764433 35789999999999 68889999999999999999999887777665432
Q ss_pred ---eeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccc
Q psy17243 240 ---VTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEI 316 (392)
Q Consensus 240 ---v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~ 316 (392)
+....|+|++.+++.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~------------------------------------------------------------- 362 (435)
T 4e54_B 344 HLTPIKAAWHPRYNLIVVG------------------------------------------------------------- 362 (435)
T ss_dssp SSCCCBCEECSSSSCEEEE-------------------------------------------------------------
T ss_pred cceeEEEEEcCCCCEEEEE-------------------------------------------------------------
Confidence 1223333333333221
Q ss_pred eecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCCCccccccccccccCcccc-ccccCccCCCCcccc
Q psy17243 317 SKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSR-QHSVDTDELSSPVDE 389 (392)
Q Consensus 317 ~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~-~fspdg~~l~~~~~d 389 (392)
+++++..+++++..++.|++||..++.....+ ...+...+.++ +|||||++||+|+++
T Consensus 363 -------------~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l--~~~~~~~v~s~~~fspdg~~lasg~d~ 421 (435)
T 4e54_B 363 -------------RYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL--YDPESSGISSLNEFNPMGDTLASAMGY 421 (435)
T ss_dssp -------------CCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE--CCSSCCCCCCEEEECTTSSCEEEECSS
T ss_pred -------------EcCCCCeEEEEecCCCEEEEEECCCCcEEEEE--eCCCCCcEEEEEEECCCCCEEEEEcCC
Confidence 45677777767777788999999888763321 11234456664 799999999988754
No 47
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-40 Score=316.26 Aligned_cols=237 Identities=22% Similarity=0.351 Sum_probs=205.9
Q ss_pred ceeeeccCCcCeeEEEecCC-CCeEEEEeCCCeEEEEeCCCC-----ceeEEecccccceEEEEEecCCCEEEEEeCCCe
Q psy17243 18 LQSTMEGHLNTVSCVAISPN-SIFAVSGSEDNTAKVWGLTLG-----SVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGV 91 (392)
Q Consensus 18 ~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 91 (392)
....+++|.+.|++++|+|+ +++|++|+.|++|++|++.+. .....+.+|...|.+++|+|++++|++++.|+.
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 34568899999999999986 479999999999999998763 345678899999999999999999999999999
Q ss_pred EEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCC--CE
Q psy17243 92 IAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDS--QY 166 (392)
Q Consensus 92 i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ 166 (392)
|++||+.+++.+.. +...+.+++|+|++++|++++.|+.|++||...............|...|.+++|+|++ ..
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 99999999877654 45678999999999999999999999999985322111111123578889999999986 68
Q ss_pred EEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEc
Q psy17243 167 LITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLA 246 (392)
Q Consensus 167 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 246 (392)
|++++.|+.|++||+++++....+.+|...|++++|+ +++.+|++++.||.|++||+.+++.+..+.. ...|.+++|+
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s-pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~s 611 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS-PDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFS 611 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEEC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEc
Confidence 9999999999999999999999999999999999999 6889999999999999999999998887764 5689999999
Q ss_pred CCCeEEEEcC
Q psy17243 247 GDGTVAMSDL 256 (392)
Q Consensus 247 ~dg~~~~~~~ 256 (392)
|++.+++.+.
T Consensus 612 p~~~~l~~~~ 621 (694)
T 3dm0_A 612 PNRYWLCAAT 621 (694)
T ss_dssp SSSSEEEEEE
T ss_pred CCCcEEEEEc
Confidence 9999988764
No 48
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.3e-40 Score=320.43 Aligned_cols=242 Identities=15% Similarity=0.269 Sum_probs=217.6
Q ss_pred cceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEE
Q psy17243 17 ELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWV 96 (392)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 96 (392)
+..+.+.+|.+.|.+++|+|++++|++++.||.|+|||+.+++.+..+..|..+|.+++|+|++++|++++.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeee---cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEc-CCCEEEEeeC
Q psy17243 97 ADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTW-DSQYLITGSR 172 (392)
Q Consensus 97 ~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 172 (392)
+.+++.+.. +...+.+++|+|++++|++++.||.|++||+... .........|...|.+++|+| ++++|++++.
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN--WALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT--SEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC--ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC
Confidence 999987654 4457899999999999999999999999999743 133344557889999999999 8899999999
Q ss_pred CCcEEEEEcCCCeEEEEEecCC-CceeEEEEec-CCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCe
Q psy17243 173 DMSLKVWQVVGGKLAQVLVGHT-DHVSCVAVAV-TNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGT 250 (392)
Q Consensus 173 dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~ 250 (392)
||.|++||+.+++....+..+. ..+.+++|+| +++.++++++.||.|++||+.+++.+..+.+|...|.+++|+|+|.
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 9999999999888777776655 8899999995 2788999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCC
Q psy17243 251 VAMSDLPPSR 260 (392)
Q Consensus 251 ~~~~~~~~~~ 260 (392)
+++++..++.
T Consensus 242 ~l~~~~~dg~ 251 (814)
T 3mkq_A 242 IIISGSEDGT 251 (814)
T ss_dssp EEEEEETTSC
T ss_pred EEEEEeCCCe
Confidence 8888876544
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.2e-39 Score=287.69 Aligned_cols=233 Identities=17% Similarity=0.162 Sum_probs=209.1
Q ss_pred eccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc--eeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCC
Q psy17243 22 MEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS--VVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADN 99 (392)
Q Consensus 22 ~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 99 (392)
+..|..+|++++|+|++++|++++.|+.|++||+++++ .+..+..|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45589999999999999999999999999999999987 8889999999999999999999999999999999999988
Q ss_pred ceeee-----ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc-ceeeeccccceEEEEEEcCCCEEEEeeCC
Q psy17243 100 AQLLY-----SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD-ERFTVSHSEEITCFTVTWDSQYLITGSRD 173 (392)
Q Consensus 100 ~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 173 (392)
++... .+...+.+++|+|++++|++++.|+.|++||++....... ......|...|.+++|+|++++|++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 86432 3456889999999999999999999999999985443222 22334678999999999999999999999
Q ss_pred CcEEEEEc------------------CCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc
Q psy17243 174 MSLKVWQV------------------VGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG 235 (392)
Q Consensus 174 g~i~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 235 (392)
+.|++||+ ..++.+..+..|...|.+++|+ +++.+|++++.|+.|++||+++++.+..+..
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-ANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC-CCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 99999995 4678888898999999999999 6778999999999999999999999999999
Q ss_pred cccceeEEEEcCCCeEEEEc
Q psy17243 236 HLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 236 ~~~~v~~~~~~~dg~~~~~~ 255 (392)
|...|.+++|+|++++++++
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE
T ss_pred CCCCeEEEEEecCCCEEEEE
Confidence 99999999999999999987
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-39 Score=292.67 Aligned_cols=256 Identities=12% Similarity=0.133 Sum_probs=211.9
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|++||+.+++....+..| ..+....|+|++++|++++.||.|++||+++++....+..|...|.+++|+|++
T Consensus 73 ~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 151 (420)
T 3vl1_A 73 KARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSG 151 (420)
T ss_dssp EEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTS
T ss_pred EEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCC
Confidence 4678999999999999888888776 445556789999999999999999999999999999888999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEE
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITC 157 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~ 157 (392)
++|++++.|+.|++||+.+++.+.. +...+.+++|+|++++|++++.|+.|++||+++............+...+.+
T Consensus 152 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~ 231 (420)
T 3vl1_A 152 EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNS 231 (420)
T ss_dssp SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccE
Confidence 9999999999999999998876554 4568899999999999999999999999999855433222221234444444
Q ss_pred E---------------------EEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe-cCCCceeEEEEecCCCcEEEEecC
Q psy17243 158 F---------------------TVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV-GHTDHVSCVAVAVTNKSLVVSGSK 215 (392)
Q Consensus 158 ~---------------------~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~ 215 (392)
+ +|+|++++|++++.||.|++||+++++.+..+. .|...|.+++|+|.+..+|++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~ 311 (420)
T 3vl1_A 232 IALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE 311 (420)
T ss_dssp EEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET
T ss_pred EEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC
Confidence 4 456789999999999999999999998777764 478899999999554449999999
Q ss_pred CCeEEEEECCCCce-eeeecc-cccceeEEEEcCCCeEEEEcCCC
Q psy17243 216 DSNLIVWDMETGGE-EHFLAG-HLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 216 dg~i~iwd~~~~~~-~~~~~~-~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
||.|++||+++++. +..+.. |...|.++.+ +++++++++..+
T Consensus 312 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d 355 (420)
T 3vl1_A 312 NGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFD 355 (420)
T ss_dssp TSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTT
T ss_pred CCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCC
Confidence 99999999998754 667766 5667877755 577788876533
No 51
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.8e-38 Score=269.93 Aligned_cols=236 Identities=16% Similarity=0.218 Sum_probs=200.0
Q ss_pred eeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCC--CceeEEecccccceEEEEEecC--CCEEEEEeCCCeEEEE
Q psy17243 20 STMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTL--GSVVSTFKSHQSTILAVAVLSD--SRRVVTSDKAGVIAVW 95 (392)
Q Consensus 20 ~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw 95 (392)
..+.+|...|++++|+|++++|++|+.|++|+|||++. .+.+..+.+|.++|.+++|+++ +++|++++.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45678999999999999999999999999999999974 4678899999999999999863 8899999999999999
Q ss_pred EcCCce--ee---eecccceeEEEEeCC--CCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcC-----
Q psy17243 96 VADNAQ--LL---YSALGPSKCLTVTHN--MKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWD----- 163 (392)
Q Consensus 96 d~~~~~--~~---~~~~~~~~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 163 (392)
|+++++ .+ ..+...+.+++|+|+ +.+|++++.|+.|++||++...... ......|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCccccc
Confidence 998774 22 234568899999997 8899999999999999997543222 2345578999999999997
Q ss_pred --------CCEEEEeeCCCcEEEEEcCCCe----EEEEEecCCCceeEEEEecCC--CcEEEEecCCCeEEEEECCCCc-
Q psy17243 164 --------SQYLITGSRDMSLKVWQVVGGK----LAQVLVGHTDHVSCVAVAVTN--KSLVVSGSKDSNLIVWDMETGG- 228 (392)
Q Consensus 164 --------~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~- 228 (392)
+++|++|+.|+.|++||+++++ ....+.+|...|.+++|+|.. +.+|++++.|++|++||++++.
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 5799999999999999998765 567788999999999999653 5899999999999999998753
Q ss_pred --eeeee--cccccceeEEEEcCCCeEEEEcC
Q psy17243 229 --EEHFL--AGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 229 --~~~~~--~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
....+ ..|...|.+++|+|+|++++++.
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred ccceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 12233 46788999999999999888764
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2e-40 Score=288.47 Aligned_cols=313 Identities=15% Similarity=0.171 Sum_probs=247.5
Q ss_pred CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceee-
Q psy17243 25 HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLL- 103 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~- 103 (392)
|..+|.+++|+|+|++++++..++.+.+|.............|...|.+++|+|++++|++++ ||.|++||+.+++..
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 567899999999999999888888777776665555445557999999999999999999999 999999999876432
Q ss_pred --e-----ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcE
Q psy17243 104 --Y-----SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSL 176 (392)
Q Consensus 104 --~-----~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 176 (392)
. .+...+.+++|+|+++++++++.|+.|++||+...... .......|...+.+++|+|++++|++++.|+.|
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR-IKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E-EEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc-eeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 2 34568899999999999999999999999999855321 233445688899999999999999999999999
Q ss_pred EEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 177 KVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 177 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
++||+++++.+..+..|...+.+++|+ +++.+|++++.||.|++||+++++.+..+. +...+.+++|+|++++++++.
T Consensus 166 ~~~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGHTDGASCIDIS-NDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEE
T ss_pred EEEeCCCCceeeeeecccCceEEEEEC-CCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEc
Confidence 999999999999999999999999999 678899999999999999999998887765 778899999999999999875
Q ss_pred CCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecceeccCCCCCCChhhhh
Q psy17243 257 PPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQGLGPEQAA 336 (392)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~~~s~dg~~ 336 (392)
.++.. +.|....+.. ..... +.......+|+|++++
T Consensus 244 ~~~~i-------------------~~~~~~~~~~----------------~~~~~---------~~~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 244 ESSNV-------------------EVLHVNKPDK----------------YQLHL---------HESCVLSLKFAYCGKW 279 (337)
T ss_dssp TTSCE-------------------EEEETTSSCE----------------EEECC---------CSSCEEEEEECTTSSE
T ss_pred CCCcE-------------------EEEECCCCCe----------------EEEcC---------CccceeEEEECCCCCE
Confidence 43221 1122111100 00000 0001111268999999
Q ss_pred hhcccChHHHHHHhhCCCCCCccccccccccccCccccccccCccCCCCccccc
Q psy17243 337 LAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTDELSSPVDEF 390 (392)
Q Consensus 337 la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~~~d~ 390 (392)
|+ +++.|+.|++||+.++... ....+...+..++|+|||++|++++.|.
T Consensus 280 l~-~~~~dg~i~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 280 FV-STGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISVDDKYIVTGSGDK 328 (337)
T ss_dssp EE-EEETTSEEEEEETTTCCEE----EEEECSSCEEEEEECTTSCEEEEEETTS
T ss_pred EE-EecCCCcEEEEECCCCeEE----EEecCCCcEEEEEECCCCCEEEEecCCC
Confidence 98 8899999999999887763 2233455677799999999999887763
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.2e-38 Score=289.74 Aligned_cols=226 Identities=23% Similarity=0.407 Sum_probs=197.8
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEe--c
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVL--S 78 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~--~ 78 (392)
+|+.||.|++||+.+++.+..+.+|...|.+++|+|++ +|++|+.||+|++||+++++.+..+.+|...|.+++|+ +
T Consensus 137 sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~ 215 (464)
T 3v7d_B 137 TGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYK 215 (464)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESS
T ss_pred EEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCC
Confidence 57899999999999999999999999999999999988 89999999999999999999999999999999999999 4
Q ss_pred CCCEEEEEeCCCeEEEEEcCCceeeee-----------------------ccc-ceeEEEEeCCCCEEEEecCCCcEEEE
Q psy17243 79 DSRRVVTSDKAGVIAVWVADNAQLLYS-----------------------ALG-PSKCLTVTHNMKYIVSGDGDNSLRIW 134 (392)
Q Consensus 79 ~~~~l~~~~~d~~i~iwd~~~~~~~~~-----------------------~~~-~~~~~~~~~~~~~l~~~~~d~~i~~~ 134 (392)
+++++++++.|+.|++||+.++..... ..+ .....+++++++++++++.|+.|++|
T Consensus 216 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vw 295 (464)
T 3v7d_B 216 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVW 295 (464)
T ss_dssp SCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEE
T ss_pred CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEE
Confidence 778999999999999999987753321 111 12234457889999999999999999
Q ss_pred eCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEec
Q psy17243 135 PTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 135 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 214 (392)
|+++. ........|...|.+++|+|++++|++++.||.|++||+++++++..+.+|...|.+++|+ +.+|++++
T Consensus 296 d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s 369 (464)
T 3v7d_B 296 DVAQM---KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS---DKFLVSAA 369 (464)
T ss_dssp ETTTT---EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC---SSEEEEEE
T ss_pred ECCCC---cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc---CCEEEEEe
Confidence 99743 3344455789999999999999999999999999999999999999999999999999997 57899999
Q ss_pred CCCeEEEEECCCCceeeee
Q psy17243 215 KDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 215 ~dg~i~iwd~~~~~~~~~~ 233 (392)
.||.|++||+.+++.....
T Consensus 370 ~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 370 ADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp TTSEEEEEETTTCCEEEEE
T ss_pred CCCcEEEEECCCCceeeee
Confidence 9999999999987654433
No 54
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.5e-39 Score=286.03 Aligned_cols=249 Identities=14% Similarity=0.108 Sum_probs=219.6
Q ss_pred CCccCCeEEEEECCCcc------ceeeeccCCcCeeEEEecCC----C---CeEEEEeCCCeEEEEeCCCCce-----eE
Q psy17243 1 MGGMDCLVNVWQMNSHE------LQSTMEGHLNTVSCVAISPN----S---IFAVSGSEDNTAKVWGLTLGSV-----VS 62 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~------~~~~~~~h~~~v~~~~~~~~----~---~~l~~~~~dg~v~iwd~~~~~~-----~~ 62 (392)
+|+.||.|++||+.+++ ....+.+|...|.+++|+|+ + ++|++++.||.|++||+.+++. +.
T Consensus 31 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~ 110 (397)
T 1sq9_A 31 SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFE 110 (397)
T ss_dssp EEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEE
T ss_pred EEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccce
Confidence 47899999999999887 78888999999999999999 9 9999999999999999998887 88
Q ss_pred Eeccc-----ccceEEEEEe----cCCCE-EEEEeCCCeEEEEEcCC------ceeee-----ec----------cccee
Q psy17243 63 TFKSH-----QSTILAVAVL----SDSRR-VVTSDKAGVIAVWVADN------AQLLY-----SA----------LGPSK 111 (392)
Q Consensus 63 ~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~iwd~~~------~~~~~-----~~----------~~~~~ 111 (392)
.+..| ...|.+++|+ |++++ |++++.||.|++||+.+ ++.+. .+ ...+.
T Consensus 111 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 190 (397)
T 1sq9_A 111 KLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFAT 190 (397)
T ss_dssp EECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCC
T ss_pred eecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCce
Confidence 88888 5999999999 99999 99999999999999998 55443 33 55788
Q ss_pred EEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeec---c---ccceEEEEEEcCCCEEEEeeCC---CcEEEEEcC
Q psy17243 112 CLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVS---H---SEEITCFTVTWDSQYLITGSRD---MSLKVWQVV 182 (392)
Q Consensus 112 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~ 182 (392)
+++|+|++ ++++++.|+.|++||++.. ........ | ...|.+++|+|++++|++++.| +.|++||++
T Consensus 191 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 191 SVDISERG-LIATGFNNGTVQISELSTL---RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp EEEECTTS-EEEEECTTSEEEEEETTTT---EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT
T ss_pred EEEECCCc-eEEEEeCCCcEEEEECCCC---ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 99999999 9999999999999999743 33333444 7 8999999999999999999999 999999999
Q ss_pred CCeEEEEEec-------------CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeec------cc-------
Q psy17243 183 GGKLAQVLVG-------------HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLA------GH------- 236 (392)
Q Consensus 183 ~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~------- 236 (392)
+++.+..+.. |...|.+++|+ +++.+|++++.||.|++||+.+++.+..+. .|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g 345 (397)
T 1sq9_A 267 FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN-DSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAV 345 (397)
T ss_dssp TCCEEEEECBC--------CCBSBSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCB
T ss_pred CCcccceeccCcccccccccccccCCcEEEEEEC-CCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcc
Confidence 9999999998 99999999999 678899999999999999999999999998 77
Q ss_pred --------ccceeEEEEcCCCeEEEE
Q psy17243 237 --------LGCVTCVKLAGDGTVAMS 254 (392)
Q Consensus 237 --------~~~v~~~~~~~dg~~~~~ 254 (392)
...|.+++|+|+|+.++.
T Consensus 346 ~~~~~~~~~~~v~~~~~~~~g~~~~~ 371 (397)
T 1sq9_A 346 DEHGDSLAEPGVFDVKFLKKGWRSGM 371 (397)
T ss_dssp CTTSCBCSSCCEEEEEEECTTTSBST
T ss_pred ccccccccCCceeEEEeccccccccc
Confidence 889999999999865444
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.4e-39 Score=280.75 Aligned_cols=242 Identities=20% Similarity=0.275 Sum_probs=203.7
Q ss_pred EEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCcee---EEec--ccccceEEEEEecCCCEEE
Q psy17243 10 VWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVV---STFK--SHQSTILAVAVLSDSRRVV 84 (392)
Q Consensus 10 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~ 84 (392)
+|............+|...|++++|+|++++|++++ ||.|++||+++++.. ..+. .|...|.+++|+|++++|+
T Consensus 35 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 113 (337)
T 1gxr_A 35 GPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLI 113 (337)
T ss_dssp STTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEE
T ss_pred ccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEE
Confidence 333333333334457999999999999999999998 999999999877533 3333 6889999999999999999
Q ss_pred EEeCCCeEEEEEcCCce--eee---ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEE
Q psy17243 85 TSDKAGVIAVWVADNAQ--LLY---SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFT 159 (392)
Q Consensus 85 ~~~~d~~i~iwd~~~~~--~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~ 159 (392)
+++.|+.|++||+.+++ ... .+...+.+++++|+++++++++.|+.|++||+++. ........|...+.+++
T Consensus 114 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~---~~~~~~~~~~~~i~~~~ 190 (337)
T 1gxr_A 114 VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQ---TLVRQFQGHTDGASCID 190 (337)
T ss_dssp EEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEE
T ss_pred EEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---ceeeeeecccCceEEEE
Confidence 99999999999999876 322 34457889999999999999999999999999743 33344456889999999
Q ss_pred EEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccc
Q psy17243 160 VTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGC 239 (392)
Q Consensus 160 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 239 (392)
|+|++++|++++.|+.|++||+++++.+..+. +...+.+++|+ +++.++++++.|+.|++||+++++. ..+..|...
T Consensus 191 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s-~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~ 267 (337)
T 1gxr_A 191 ISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC-PTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESC 267 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSC
T ss_pred ECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccc
Confidence 99999999999999999999999999888775 78899999999 6788999999999999999998775 467789999
Q ss_pred eeEEEEcCCCeEEEEcCCC
Q psy17243 240 VTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 240 v~~~~~~~dg~~~~~~~~~ 258 (392)
|.+++|+|++++++++..+
T Consensus 268 v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 268 VLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp EEEEEECTTSSEEEEEETT
T ss_pred eeEEEECCCCCEEEEecCC
Confidence 9999999999999987543
No 56
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-39 Score=290.30 Aligned_cols=299 Identities=11% Similarity=0.076 Sum_probs=220.5
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec-ccccceEEEEEecC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK-SHQSTILAVAVLSD 79 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~ 79 (392)
||+.|++|+ |. +..+.+++|...|.+++|+|+| .++.+.+|+ ++....+. .|...|.+++|+|+
T Consensus 32 Sas~D~TV~--d~---~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~---~~~~~~~~~~~~~~V~~vawSPd 96 (588)
T 2j04_A 32 TTFPDISIG--QP---KYAKDINCNSKNLFHVKEFPLE-------FENKLDFEL---AQQNGLLNSQPVCYPRVCKPSPI 96 (588)
T ss_dssp ECSSSEEEE--EE---CCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSC---CCSSCSSTTSCSCCEEEEEECSS
T ss_pred EEcCCceee--cc---cccceecCCCccEEEEEECCCC-------CcceEEEEe---CCCceEeecCCCCcEEEEEECCC
Confidence 356677776 43 3333445677777777777766 344444443 33222222 35788999999999
Q ss_pred CCEEEEEeCCCeEEEEEcCCceeeeeccc-----ceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc----ceee--
Q psy17243 80 SRRVVTSDKAGVIAVWVADNAQLLYSALG-----PSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD----ERFT-- 148 (392)
Q Consensus 80 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~----~~~~-- 148 (392)
|+.|++++.||.|++||.++.-....+.. .+.+++|+|+|++|++|+.||.|++||+..+..... ....
T Consensus 97 G~~LAs~s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~ 176 (588)
T 2j04_A 97 DDWMAVLSNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRL 176 (588)
T ss_dssp SSCEEEEETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEEC
T ss_pred CCEEEEEeCCCcEEEEeCCceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeec
Confidence 99999999999999999654211112222 388999999999999999999999999986532111 2222
Q ss_pred --eccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeE---EEEE-ecCCCceeEEEEecCCCcEEEEecCCCeEEEE
Q psy17243 149 --VSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKL---AQVL-VGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVW 222 (392)
Q Consensus 149 --~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 222 (392)
.+|...|.+++|+|++ +++++.|+.|++||+.+++. .+.+ .+|...|.+++|+ +..|++++ ++.|++|
T Consensus 177 ~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLW 250 (588)
T 2j04_A 177 SDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKI 250 (588)
T ss_dssp SCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEE
T ss_pred ccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEE
Confidence 4577899999999999 88888999999999988763 3556 4788999999998 47888887 6999999
Q ss_pred ECCCCceeeeecccccceeEEEE--cCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecc
Q psy17243 223 DMETGGEEHFLAGHLGCVTCVKL--AGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVD 300 (392)
Q Consensus 223 d~~~~~~~~~~~~~~~~v~~~~~--~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (392)
|+.+++......+|...|..++| +||++.++++.
T Consensus 251 d~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~-------------------------------------------- 286 (588)
T 2j04_A 251 DLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSN-------------------------------------------- 286 (588)
T ss_dssp ETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS--------------------------------------------
T ss_pred ECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc--------------------------------------------
Confidence 99988774444479999999999 99998888753
Q ss_pred cccceeEEEeeccccceecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCCCccccccccccccCccccccccCc
Q psy17243 301 ERLKRRFSVSASMEEISKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDT 380 (392)
Q Consensus 301 ~~~~~~~~~s~s~d~~~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg 380 (392)
.+++ ++|... ..+|+||+..+| + .|+.+++|+...+.. ..+.....+.+++|||||
T Consensus 287 ------------edG~-klw~~d---~~~~spd~~l~a-~--~d~~v~lW~~~g~~l-----~~~~~~~~I~~va~SPdG 342 (588)
T 2j04_A 287 ------------KTSY-KVLLED---ELHVTADNIIAP-Y--LEKKFKKWSTIWNEF-----NNYETTLVIHGISLSPDG 342 (588)
T ss_dssp ------------SCEE-EEEESS---SEEEECCCSSHH-H--HHHHHHHTTTTTTSS-----SSSCCEEEEEEEEECTTS
T ss_pred ------------CCCC-EEEeec---cEEECCCceEEE-E--cCCEEEEEECCCCce-----eeeccceEEEEEEECCCC
Confidence 3455 556544 245889999988 5 399999999865543 223333346679999999
Q ss_pred cCCCCccc
Q psy17243 381 DELSSPVD 388 (392)
Q Consensus 381 ~~l~~~~~ 388 (392)
+.||+++.
T Consensus 343 ~~lA~~~~ 350 (588)
T 2j04_A 343 YSIAIVYD 350 (588)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEEe
Confidence 99997654
No 57
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=267.98 Aligned_cols=307 Identities=15% Similarity=0.171 Sum_probs=241.3
Q ss_pred ceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEc
Q psy17243 18 LQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVA 97 (392)
Q Consensus 18 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 97 (392)
....+.+|...|++++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 34558899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeee--cccceeEEEEeCCCCEEEEecCC-----CcEEEEeCCCCCCCCc--------ceeeecccc--ceEEEEE
Q psy17243 98 DNAQLLYS--ALGPSKCLTVTHNMKYIVSGDGD-----NSLRIWPTSPQTHKDD--------ERFTVSHSE--EITCFTV 160 (392)
Q Consensus 98 ~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~--------~~~~~~~~~--~v~~~~~ 160 (392)
.+++.+.. ...++.++.|+|+++++++++.+ +.|++||+........ ......+.. .+.+++|
T Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 104 SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 99887654 45678999999999999999999 9999999976543222 122223444 8999999
Q ss_pred EcCCCEEEEeeCCCcEEEEEcCC-CeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccc
Q psy17243 161 TWDSQYLITGSRDMSLKVWQVVG-GKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGC 239 (392)
Q Consensus 161 ~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 239 (392)
+|++++|++++.||.|++||+++ .+.+..+..|...|.+++|+ +++.+|++++.|+.|++||+++++.+..+. +...
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~ 261 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS-PDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCP 261 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSC
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC-CCCCEEEEecCCceEEEEECCCCceeeeec-CCCC
Confidence 99999999999999999999998 78889999999999999999 678899999999999999999999888887 7789
Q ss_pred eeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceec
Q psy17243 240 VTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKI 319 (392)
Q Consensus 240 v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~ 319 (392)
+..++|+|++++++.+..+...... .............|....+..... +.+
T Consensus 262 ~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~i~~~d~~~~~~~~~---------------~~~-------- 313 (369)
T 3zwl_B 262 LNTAVITPLKEFIILGGGQEAKDVT-----TTSANEGKFEARFYHKIFEEEIGR---------------VQG-------- 313 (369)
T ss_dssp EEEEEECSSSSEEEEEECCC------------------CEEEEEETTTCCEEEE---------------EEC--------
T ss_pred ceeEEecCCCceEEEeecCCCceEE-----EEecCCCcceeEEEecCCCcchhh---------------eec--------
Confidence 9999999999999987644321111 010111111222232222111000 000
Q ss_pred ceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCC
Q psy17243 320 PIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPP 356 (392)
Q Consensus 320 ~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~ 356 (392)
+.......+|+|++++|+ +++.||.|++|++.++.
T Consensus 314 -~~~~v~~~~~s~~~~~l~-s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 314 -HFGPLNTVAISPQGTSYA-SGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp -CSSCEEEEEECTTSSEEE-EEETTSEEEEEEECHHH
T ss_pred -ccCcEEEEEECCCCCEEE-EEcCCCeEEEEECcccc
Confidence 001111126899999988 88999999999987654
No 58
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-39 Score=285.10 Aligned_cols=236 Identities=11% Similarity=0.035 Sum_probs=199.4
Q ss_pred eeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCC--ceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcC
Q psy17243 21 TMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLG--SVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVAD 98 (392)
Q Consensus 21 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 98 (392)
.++.|..+|++++|+|++++|++++.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 34447789999999999999999999999999999988 7888899999999999999999999999999999999999
Q ss_pred Cce---ee---eecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeec-cccceEEEEEEcCCCEEEEee
Q psy17243 99 NAQ---LL---YSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVS-HSEEITCFTVTWDSQYLITGS 171 (392)
Q Consensus 99 ~~~---~~---~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 171 (392)
+++ .. ..+...+.+++|+|++++|++++.|+.|++||++............. |...|.+++|+|++++|++++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 876 22 34566889999999999999999999999999986553333444445 899999999999999999999
Q ss_pred CCCcEEEEEcC------------------CCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCce----
Q psy17243 172 RDMSLKVWQVV------------------GGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGE---- 229 (392)
Q Consensus 172 ~dg~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---- 229 (392)
.|+.|++||++ .++++..+ +|...|++++|+ +++.+|++++.||.|++||+.+++.
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-p~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 243 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS-PSGNALAYAGHDSSVTIAYPSAPEQPPRA 243 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC-TTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC-CCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence 99999999985 34566666 899999999999 6788999999999999999999987
Q ss_pred eeeecccccceeEEEEcCCCeEEEEcCCC
Q psy17243 230 EHFLAGHLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 230 ~~~~~~~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
+..+.+|...|.+++|+|+|++++++..+
T Consensus 244 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 244 LITVKLSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp CCCEECSSSCEEEEEEEETTEEEEEESSS
T ss_pred eEeecCCCCceEEEEEcCCCCEEEEEcCC
Confidence 78889999999999999999999998654
No 59
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.3e-39 Score=284.89 Aligned_cols=237 Identities=16% Similarity=0.144 Sum_probs=205.8
Q ss_pred ceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc------eeEEecccccceEEEEEecC----C---CEEE
Q psy17243 18 LQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS------VVSTFKSHQSTILAVAVLSD----S---RRVV 84 (392)
Q Consensus 18 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~ 84 (392)
....+.+|...|++++|+| ++|++++.||.|++||+++++ .+..+..|...|.+++|+|+ + ++|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 4556789999999999999 799999999999999999988 78888899999999999999 9 9999
Q ss_pred EEeCCCeEEEEEcCCcee-----eee---c-----ccceeEEEEe----CCCCE-EEEecCCCcEEEEeCCC------CC
Q psy17243 85 TSDKAGVIAVWVADNAQL-----LYS---A-----LGPSKCLTVT----HNMKY-IVSGDGDNSLRIWPTSP------QT 140 (392)
Q Consensus 85 ~~~~d~~i~iwd~~~~~~-----~~~---~-----~~~~~~~~~~----~~~~~-l~~~~~d~~i~~~d~~~------~~ 140 (392)
+++.|+.|++||+.+++. +.. + ...+.+++|+ |++++ |++++.|+.|++||+.. ..
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 999999999999988764 433 3 3678999999 99999 99999999999999985 32
Q ss_pred CCCcc--eee-------eccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEec---C---CCceeEEEEecC
Q psy17243 141 HKDDE--RFT-------VSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVG---H---TDHVSCVAVAVT 205 (392)
Q Consensus 141 ~~~~~--~~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~---~~~v~~~~~~~~ 205 (392)
..... ... ..|...+.+++|+|++ +|++++.|+.|++||+++++.+..+.. | ...|.+++|+ +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~-~ 243 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS-P 243 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC-S
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC-C
Confidence 22200 022 3478899999999999 999999999999999999999999998 8 9999999999 6
Q ss_pred CCcEEEEecCC---CeEEEEECCCCceeeeecc-------------cccceeEEEEcCCCeEEEEcCCC
Q psy17243 206 NKSLVVSGSKD---SNLIVWDMETGGEEHFLAG-------------HLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 206 ~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
++.+|++++.| +.|++||+++++.+..+.. |...|.+++|+|++++++++..+
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 78899999999 9999999999999999988 99999999999999999997644
No 60
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-39 Score=293.88 Aligned_cols=238 Identities=17% Similarity=0.246 Sum_probs=199.4
Q ss_pred EEECCCccceeee-ccCCcCeeEEEecC-CCCeEEEEeCCCeEEEEeCCC---Cc---eeEEecccccceEEEEEecCCC
Q psy17243 10 VWQMNSHELQSTM-EGHLNTVSCVAISP-NSIFAVSGSEDNTAKVWGLTL---GS---VVSTFKSHQSTILAVAVLSDSR 81 (392)
Q Consensus 10 vwd~~~~~~~~~~-~~h~~~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~---~~---~~~~~~~~~~~v~~~~~~~~~~ 81 (392)
.|+ .+++++..+ .+|.+.|++++|+| ++++|++|+.||+|++||+.+ +. ....+ .|...|.+++|+|+++
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~ 124 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFD 124 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSS
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCC
Confidence 466 457788888 88999999999999 999999999999999999876 43 23333 4899999999999999
Q ss_pred EEEEEeCCCeEEEEEcC---Cceeeeec---------------ccceeEEE--EeCCCCEEEEecCCCcEEEEeCCCCCC
Q psy17243 82 RVVTSDKAGVIAVWVAD---NAQLLYSA---------------LGPSKCLT--VTHNMKYIVSGDGDNSLRIWPTSPQTH 141 (392)
Q Consensus 82 ~l~~~~~d~~i~iwd~~---~~~~~~~~---------------~~~~~~~~--~~~~~~~l~~~~~d~~i~~~d~~~~~~ 141 (392)
+|++++.||.|++||++ +++.+... ...+.++. +++++.++++++.|+.|++||++...
T Consensus 125 ~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~- 203 (437)
T 3gre_A 125 AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE- 203 (437)
T ss_dssp EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC-
T ss_pred EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe-
Confidence 99999999999999995 44333221 12334444 55789999999999999999997533
Q ss_pred CCcceeeec--cccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe-cCCCceeEEEEec---CCCcEEEEecC
Q psy17243 142 KDDERFTVS--HSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV-GHTDHVSCVAVAV---TNKSLVVSGSK 215 (392)
Q Consensus 142 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~---~~~~~l~~~~~ 215 (392)
....... |...|++++|+|++++|++++.||.|++||+++++++..+. .|...|++++|+| +++.+|++++.
T Consensus 204 --~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~ 281 (437)
T 3gre_A 204 --RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS 281 (437)
T ss_dssp --EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST
T ss_pred --eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcC
Confidence 2333334 78999999999999999999999999999999999999886 7888999998875 46779999999
Q ss_pred CCeEEEEECCCCceeeeecccccceeEEEEcCCCeEE
Q psy17243 216 DSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVA 252 (392)
Q Consensus 216 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~ 252 (392)
||.|++||+++++.+..+.+|...+..+.|+|+++.+
T Consensus 282 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL 318 (437)
T ss_dssp TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG
T ss_pred CCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc
Confidence 9999999999999999999999988888888887554
No 61
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.8e-38 Score=282.46 Aligned_cols=241 Identities=26% Similarity=0.487 Sum_probs=213.5
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|++||+.+++.+..+.+|...|.+++|+ +++|++|+.||.|++||+++++.+..+.+|...|.++.|+ +
T Consensus 134 sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~ 209 (445)
T 2ovr_B 134 SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--E 209 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--T
T ss_pred EEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--C
Confidence 47899999999999999999999999999999998 5589999999999999999999999999999999999996 5
Q ss_pred CEEEEEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEE
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITC 157 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~ 157 (392)
+.+++++.||.|++||+.+++.+..+ ...+.++.+ +++++++++.|+.|++||+++. ........|...|.+
T Consensus 210 ~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~ 284 (445)
T 2ovr_B 210 KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE---TCLHTLQGHTNRVYS 284 (445)
T ss_dssp TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT---EEEEEECCCSSCEEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC---cEeEEecCCCCceEE
Confidence 68999999999999999998876554 456777777 7889999999999999999743 334444578899999
Q ss_pred EEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc--
Q psy17243 158 FTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG-- 235 (392)
Q Consensus 158 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-- 235 (392)
++| +++++++++.|+.|++||+++++.+..+.+|...+.++.++ +.++++++.||.|++||+++++.+..+..
T Consensus 285 ~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 359 (445)
T 2ovr_B 285 LQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPN 359 (445)
T ss_dssp EEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECSTT
T ss_pred EEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe---CCEEEEEeCCCeEEEEECCCCcEEEEEccCC
Confidence 998 78899999999999999999999999999999999998876 56899999999999999999999988876
Q ss_pred -cccceeEEEEcCCCeEEEEcCC
Q psy17243 236 -HLGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 236 -~~~~v~~~~~~~dg~~~~~~~~ 257 (392)
|...|.+++|+ +.+++++..
T Consensus 360 ~~~~~v~~~~~~--~~~l~s~~~ 380 (445)
T 2ovr_B 360 KHQSAVTCLQFN--KNFVITSSD 380 (445)
T ss_dssp SCSSCEEEEEEC--SSEEEEEET
T ss_pred CCCCCEEEEEEC--CCEEEEEeC
Confidence 78899999996 456666543
No 62
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.2e-37 Score=294.82 Aligned_cols=230 Identities=21% Similarity=0.376 Sum_probs=199.3
Q ss_pred CCccCCeEEEEECCCc-----cceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEE
Q psy17243 1 MGGMDCLVNVWQMNSH-----ELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVA 75 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 75 (392)
||+.|++|++|++.+. .....+.+|...|.+++|+|++++|++|+.||+|+|||+.+++.+..+.+|...|.+++
T Consensus 400 s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~ 479 (694)
T 3dm0_A 400 SASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVA 479 (694)
T ss_dssp EEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEE
Confidence 5889999999999753 34567889999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEcCCceeee------ecccceeEEEEeCCC--CEEEEecCCCcEEEEeCCCCCCCCccee
Q psy17243 76 VLSDSRRVVTSDKAGVIAVWVADNAQLLY------SALGPSKCLTVTHNM--KYIVSGDGDNSLRIWPTSPQTHKDDERF 147 (392)
Q Consensus 76 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~------~~~~~~~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 147 (392)
|+|++++|++++.|+.|++||........ .+...+.+++|+|++ ..+++++.|+.|++||++.. .....
T Consensus 480 ~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~---~~~~~ 556 (694)
T 3dm0_A 480 FSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC---KLRST 556 (694)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC---CEEEE
T ss_pred EeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC---cEEEE
Confidence 99999999999999999999987654332 234468999999986 68999999999999999743 33445
Q ss_pred eeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCC
Q psy17243 148 TVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 148 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
...|...|++++|+|++++|++++.||.|++||+++++.+..+. +...+.+++|+ +++.++++++ ++.|++||++++
T Consensus 557 ~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s-p~~~~l~~~~-~~~i~iwd~~~~ 633 (694)
T 3dm0_A 557 LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFS-PNRYWLCAAT-EHGIKIWDLESK 633 (694)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEEEC-SSSSEEEEEE-TTEEEEEETTTT
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEEEc-CCCcEEEEEc-CCCEEEEECCCC
Confidence 56799999999999999999999999999999999999888776 45689999999 5677776665 667999999999
Q ss_pred ceeeeeccc
Q psy17243 228 GEEHFLAGH 236 (392)
Q Consensus 228 ~~~~~~~~~ 236 (392)
+.+..+..+
T Consensus 634 ~~~~~~~~~ 642 (694)
T 3dm0_A 634 SIVEDLKVD 642 (694)
T ss_dssp EEEEEECCC
T ss_pred CChhhhccc
Confidence 888776543
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-37 Score=279.55 Aligned_cols=252 Identities=17% Similarity=0.252 Sum_probs=216.5
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|++||+.+++....+.+|...|++++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+++|+|++
T Consensus 114 ~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 114 LGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRG 193 (420)
T ss_dssp EEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTT
T ss_pred EEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCC
Confidence 46889999999999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCceeeeecc---------------------------cceeEEEEeCCCCEEEEecCCCcEEE
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLLYSAL---------------------------GPSKCLTVTHNMKYIVSGDGDNSLRI 133 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~l~~~~~d~~i~~ 133 (392)
++|++++.|+.|++||+++++.+..+. .++.+++|+|++++|++++.||.|++
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 273 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV 273 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence 999999999999999999998776554 23445667899999999999999999
Q ss_pred EeCCCCCCCCcceeeeccccceEEEEEEcCCC-EEEEeeCCCcEEEEEcCCCe-EEEEEec-CCCceeEEEEecCCCcEE
Q psy17243 134 WPTSPQTHKDDERFTVSHSEEITCFTVTWDSQ-YLITGSRDMSLKVWQVVGGK-LAQVLVG-HTDHVSCVAVAVTNKSLV 210 (392)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~-~~~~v~~~~~~~~~~~~l 210 (392)
||++.... .......|...|.+++|+|++. +|++++.||.|++||+++++ ++..+.. |...+.++.+. ++.+|
T Consensus 274 ~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l 349 (420)
T 3vl1_A 274 HNVFSKEQ--TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA--AGALF 349 (420)
T ss_dssp EETTTCCE--EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE--TTEEE
T ss_pred EECCCCce--eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC--CCCEE
Confidence 99975432 2233345788999999999998 99999999999999999875 4677766 66778888664 56799
Q ss_pred EEecCCCeEEEEECCCCc---------eeeeecccccceeEEEEcCCCe----EEEEcC
Q psy17243 211 VSGSKDSNLIVWDMETGG---------EEHFLAGHLGCVTCVKLAGDGT----VAMSDL 256 (392)
Q Consensus 211 ~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~v~~~~~~~dg~----~~~~~~ 256 (392)
++++.|+.|++|++..+. ....+..|...|.+++|+|+++ +++.+.
T Consensus 350 ~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 350 VSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK 408 (420)
T ss_dssp EEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET
T ss_pred EEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC
Confidence 999999999999988742 2234567888999999999998 666653
No 64
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.9e-38 Score=285.58 Aligned_cols=316 Identities=22% Similarity=0.350 Sum_probs=242.1
Q ss_pred ccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy17243 16 HELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVW 95 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 95 (392)
.+....+.+|.+.|.. ++.+++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ ++.+++++.||.|++|
T Consensus 108 ~~~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVW 184 (445)
T ss_dssp CCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred cceeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEE
Confidence 3456678899987633 345568899999999999999999999999999999999999997 5699999999999999
Q ss_pred EcCCceeeeecc---cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC
Q psy17243 96 VADNAQLLYSAL---GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR 172 (392)
Q Consensus 96 d~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 172 (392)
|+.+++.+..+. ..+.++.++ ++.+++++.|+.|++||+.+. ........|...+.++++ +++++++++.
T Consensus 185 d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~---~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 257 (445)
T 2ovr_B 185 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETG---QCLHVLMGHVAAVRCVQY--DGRRVVSGAY 257 (445)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSC---CEEEEEECCSSCEEEEEE--CSSCEEEEET
T ss_pred ECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCC---cEEEEEcCCcccEEEEEE--CCCEEEEEcC
Confidence 999998876554 467777775 678999999999999999743 334445578999999998 7889999999
Q ss_pred CCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEE
Q psy17243 173 DMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVA 252 (392)
Q Consensus 173 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~ 252 (392)
||.|++||+++++++..+.+|...|.++.| ++.++++++.|+.|++||+++++.+..+.+|...+.++.++ +.++
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l 332 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNIL 332 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEE
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEE
Confidence 999999999999999999999999999998 47889999999999999999999999999999999988875 4466
Q ss_pred EEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecceeccCCCC-CCC
Q psy17243 253 MSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQ-GLG 331 (392)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~-~~s 331 (392)
+++..++.. ..|....+..... +.+... ..+.+ .+.
T Consensus 333 ~~~~~dg~i-------------------~vwd~~~~~~~~~---------------~~~~~~---------~~~~v~~~~ 369 (445)
T 2ovr_B 333 VSGNADSTV-------------------KIWDIKTGQCLQT---------------LQGPNK---------HQSAVTCLQ 369 (445)
T ss_dssp EEEETTSCE-------------------EEEETTTCCEEEE---------------ECSTTS---------CSSCEEEEE
T ss_pred EEEeCCCeE-------------------EEEECCCCcEEEE---------------EccCCC---------CCCCEEEEE
Confidence 665433221 1121111110000 000000 00000 122
Q ss_pred hhhhhhhcccChHHHHHHhhCCCCCCccccc--cccccccCccccccccCccCCCCccccc
Q psy17243 332 PEQAALAQSQHFDQLEALWNKKSPPRSRRFE--HSMSKQNSYSSRQHSVDTDELSSPVDEF 390 (392)
Q Consensus 332 ~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~--~~~~~~~~~~~~~fspdg~~l~~~~~d~ 390 (392)
.++.+|+ +++.||.|++||+.+++....+. ........+.+++|+|+|.+||+|+.|.
T Consensus 370 ~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 370 FNKNFVI-TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp ECSSEEE-EEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred ECCCEEE-EEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 3456777 88999999999999887644331 1123445577799999999999888775
No 65
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-38 Score=286.11 Aligned_cols=246 Identities=14% Similarity=0.071 Sum_probs=196.2
Q ss_pred CCccCCeEEEEECCCccce----eeeccCCcCeeEEEecCC------CCeEEEEeCCCeEEEEeCCCCce----------
Q psy17243 1 MGGMDCLVNVWQMNSHELQ----STMEGHLNTVSCVAISPN------SIFAVSGSEDNTAKVWGLTLGSV---------- 60 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~----~~~~~h~~~v~~~~~~~~------~~~l~~~~~dg~v~iwd~~~~~~---------- 60 (392)
+|+.|++|+|||+.+++.. ..+..|.+.|.+++|+|+ +.+||+++.||+|++||+.+++.
T Consensus 178 S~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~ 257 (524)
T 2j04_B 178 KEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEK 257 (524)
T ss_dssp ----CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCS
T ss_pred cCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecC
Confidence 4788999999999877643 346678899999999996 57999999999999999987642
Q ss_pred -eEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCcee----eeecccceeEE--EEeCCC-CEEEEecCCCcEE
Q psy17243 61 -VSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQL----LYSALGPSKCL--TVTHNM-KYIVSGDGDNSLR 132 (392)
Q Consensus 61 -~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~--~~~~~~-~~l~~~~~d~~i~ 132 (392)
...+.+|...|.+++|+++ ..|++|+.||+|++||++++.. +..+...+.++ .+++++ .+|++++.|++|+
T Consensus 258 p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 258 PSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp CSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred ceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 2467789999999999986 4899999999999999987632 34456788888 567887 8999999999999
Q ss_pred EEeCCCCCCCCcceeeeccc--cceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEE
Q psy17243 133 IWPTSPQTHKDDERFTVSHS--EEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLV 210 (392)
Q Consensus 133 ~~d~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 210 (392)
+||++.... ......|. ..|.+++|+|+++.+++++.|++|++||++++.++..+.+|...|++++|+ +++.+|
T Consensus 337 lWD~~~~~~---~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S-p~g~~l 412 (524)
T 2j04_B 337 IFNPKDIAT---TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVS-RLHPMV 412 (524)
T ss_dssp EECGGGHHH---HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECC-SSCCBC
T ss_pred EEECCCCCc---ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeC-CCCCeE
Confidence 999974322 22222333 347899999999999999999999999999999888899999999999999 678889
Q ss_pred EEecCCCeEEEEECCCCceeeeecc-----cccceeEEEEcCCCeEE
Q psy17243 211 VSGSKDSNLIVWDMETGGEEHFLAG-----HLGCVTCVKLAGDGTVA 252 (392)
Q Consensus 211 ~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~dg~~~ 252 (392)
++|+.||+|++||+..+ .+..... +...+.+++|+|+|..+
T Consensus 413 ~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 413 LAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp EEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEE
T ss_pred EEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeE
Confidence 99999999999998653 2222211 11257799999999854
No 66
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=267.59 Aligned_cols=253 Identities=19% Similarity=0.254 Sum_probs=227.1
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+. +...|.+++|+|++
T Consensus 49 ~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 127 (369)
T 3zwl_B 49 SCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCG 127 (369)
T ss_dssp EEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTS
T ss_pred EEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCC
Confidence 46789999999999999999999999999999999999999999999999999999999999888 88999999999999
Q ss_pred CEEEEEeCC-----CeEEEEEcCCceee--------------eeccc--ceeEEEEeCCCCEEEEecCCCcEEEEeCCCC
Q psy17243 81 RRVVTSDKA-----GVIAVWVADNAQLL--------------YSALG--PSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQ 139 (392)
Q Consensus 81 ~~l~~~~~d-----~~i~iwd~~~~~~~--------------~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 139 (392)
+++++++.+ +.|++||+...... ..+.. .+.+++|+|+++++++++.||.|++||++..
T Consensus 128 ~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 207 (369)
T 3zwl_B 128 NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN 207 (369)
T ss_dssp SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTT
T ss_pred CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 999999999 99999998765321 11222 7889999999999999999999999999742
Q ss_pred CCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCC--
Q psy17243 140 THKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDS-- 217 (392)
Q Consensus 140 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-- 217 (392)
.........|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +...+.+++|+ +++.++++++.++
T Consensus 208 --~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~-~~~~~l~~~~~~~~~ 283 (369)
T 3zwl_B 208 --YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVIT-PLKEFIILGGGQEAK 283 (369)
T ss_dssp --TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEEC-SSSSEEEEEECCC--
T ss_pred --cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEec-CCCceEEEeecCCCc
Confidence 23344455788999999999999999999999999999999999988887 78899999999 6778888888887
Q ss_pred ------------eEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCCC
Q psy17243 218 ------------NLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 218 ------------~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
.+++||+.+++.+..+.+|...|.+++|+|++++++++..+
T Consensus 284 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 284 DVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp -----------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCC
Confidence 89999999999999999999999999999999999998644
No 67
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.4e-38 Score=270.51 Aligned_cols=237 Identities=14% Similarity=0.198 Sum_probs=193.9
Q ss_pred eeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc--eeEEecccccceEEEEEec--CCCEEEEEeCCCeEEEEE
Q psy17243 21 TMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS--VVSTFKSHQSTILAVAVLS--DSRRVVTSDKAGVIAVWV 96 (392)
Q Consensus 21 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd 96 (392)
.+.+|.+.|++++|+|++++|++|+.|++|+|||+++++ .+..+.+|...|.+++|++ ++++|++++.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998875 4678899999999999975 488999999999999999
Q ss_pred cCCce--eee---ecccceeEEEEeCC--CCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcC------
Q psy17243 97 ADNAQ--LLY---SALGPSKCLTVTHN--MKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWD------ 163 (392)
Q Consensus 97 ~~~~~--~~~---~~~~~~~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~------ 163 (392)
+++++ .+. .+...+.+++|+|+ +.+|++++.|+.|++||++.............|...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98863 333 35567899999997 789999999999999999754222112334468889999999987
Q ss_pred -----------CCEEEEeeCCCcEEEEEcCCC---eEEEEEecCCCceeEEEEecCC---CcEEEEecCCCeEEEEECCC
Q psy17243 164 -----------SQYLITGSRDMSLKVWQVVGG---KLAQVLVGHTDHVSCVAVAVTN---KSLVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 164 -----------~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~ 226 (392)
+++|++++.|+.|++||++.. +++..+.+|...|.+++|+|.. +.+|++++.|++|++|++.+
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 468999999999999999765 4677788999999999999643 37899999999999999986
Q ss_pred Cc----eeeeecccccceeEEEEcCCCeEEEEcCC
Q psy17243 227 GG----EEHFLAGHLGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 227 ~~----~~~~~~~~~~~v~~~~~~~dg~~~~~~~~ 257 (392)
.. ....+..|...|.+++|+|+|++++++..
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 31 22345678889999999999998888653
No 68
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.5e-36 Score=269.77 Aligned_cols=251 Identities=19% Similarity=0.300 Sum_probs=213.7
Q ss_pred ccCCeEEEEECCCccceeeec--cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 3 GMDCLVNVWQMNSHELQSTME--GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+.|++|+|||..+++....+. +|...|++++|+|+|++|++|+.||.|+|||+++++.+..+.+|...+.++.++ +
T Consensus 122 gld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~ 199 (420)
T 4gga_A 122 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--S 199 (420)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--T
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--C
Confidence 468999999999999887664 678889999999999999999999999999999999999999999999998875 6
Q ss_pred CEEEEEeCCCeEEEEEcCCcee----eeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCC-Ccceeeeccccce
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQL----LYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHK-DDERFTVSHSEEI 155 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~~v 155 (392)
..|++++.|+.+++||...... +..+...+..+.++|+++++++++.|+.+++|+....... ........|...|
T Consensus 200 ~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V 279 (420)
T 4gga_A 200 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV 279 (420)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCE
T ss_pred CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCce
Confidence 7999999999999999886543 2345567889999999999999999999999999865543 2344555788999
Q ss_pred EEEEEEcCC-CEEEE--eeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEE-ecCCCeEEEEECCCCceee
Q psy17243 156 TCFTVTWDS-QYLIT--GSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVS-GSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 156 ~~~~~~~~~-~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~ 231 (392)
.+++|+|++ .++++ |+.|++|++||+.++++...+..| ..+.++.|+|....++++ |+.|+.|+|||+.+++++.
T Consensus 280 ~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~ 358 (420)
T 4gga_A 280 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA 358 (420)
T ss_dssp EEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE
T ss_pred eeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEE
Confidence 999999975 45554 457999999999999999888754 578889999555544443 3479999999999999999
Q ss_pred eecccccceeEEEEcCCCeEEEEcC
Q psy17243 232 FLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 232 ~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.+.+|.+.|++++|+|||++++++.
T Consensus 359 ~l~gH~~~V~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 359 ELKGHTSRVLSLTMSPDGATVASAA 383 (420)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 9999999999999999998877753
No 69
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-37 Score=264.48 Aligned_cols=228 Identities=23% Similarity=0.288 Sum_probs=199.0
Q ss_pred CccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy17243 15 SHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAV 94 (392)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 94 (392)
..+....+.+|.+.|++++| |++++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.|+.+++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 34677889999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCce---e---eeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEc-CCCEE
Q psy17243 95 WVADNAQ---L---LYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTW-DSQYL 167 (392)
Q Consensus 95 wd~~~~~---~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l 167 (392)
|++.... . +..+...+.++.+ +++++++++.|+.|++||. .........|...+.++++.| +++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE-----GSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET-----TEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC-----CcEEEecccCCCceeEEEEccCCCCEE
Confidence 9987652 2 2334567788888 6779999999999999992 223344457889999999998 89999
Q ss_pred EEeeCCCcEEEEEcCCCeEEEEEec-CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEc
Q psy17243 168 ITGSRDMSLKVWQVVGGKLAQVLVG-HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLA 246 (392)
Q Consensus 168 ~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 246 (392)
++++.|+.|++|| ..+....+.. |...+.+++|+ +++. +++++.||.|++||+++++.+..+..|...|.+++|+
T Consensus 159 ~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~-~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 234 (313)
T 3odt_A 159 LTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVV-DDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLL 234 (313)
T ss_dssp EEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEE-ETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEc-CCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEe
Confidence 9999999999999 5567777776 89999999999 4555 8899999999999999999999999999999999999
Q ss_pred CCCeEEEE
Q psy17243 247 GDGTVAMS 254 (392)
Q Consensus 247 ~dg~~~~~ 254 (392)
|++.+++.
T Consensus 235 ~~~~l~~~ 242 (313)
T 3odt_A 235 PNGDIVSC 242 (313)
T ss_dssp TTSCEEEE
T ss_pred cCCCEEEE
Confidence 99964433
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-37 Score=275.02 Aligned_cols=286 Identities=17% Similarity=0.251 Sum_probs=223.4
Q ss_pred cCCcC--eeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecc-cccceEEEEEecCCCEEEEEeCCCeEEEEEcCCc
Q psy17243 24 GHLNT--VSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKS-HQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNA 100 (392)
Q Consensus 24 ~h~~~--v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 100 (392)
+|... +.+++|++ ..+++++.|+.|++||+.+++....+.. |...|.+++|+|++++|++++.||.|++||+.++
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 45544 44566665 4688888999999999999998887775 7889999999999999999999999999999998
Q ss_pred eeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEE
Q psy17243 101 QLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLK 177 (392)
Q Consensus 101 ~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 177 (392)
+.+..+ ...+.++.| +++.+++++.|+.|++||++... ........|...|.+++|+|++++|++++.|+.|+
T Consensus 167 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 167 TKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN--HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp CEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCc--ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Confidence 876654 456788888 56799999999999999997432 23444557899999999999999999999999999
Q ss_pred EEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEec--CCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEc
Q psy17243 178 VWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGS--KDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 178 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
+||+++++++..+..|...|.+++|+|.+..++++++ .|+.|++||+.+++.+..+. +...|.+++|+|+++++++.
T Consensus 243 iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 243 IWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp EEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEE
T ss_pred EccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEE
Confidence 9999999999999999999999999977788888876 89999999999999988886 66789999999999999883
Q ss_pred --CCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecceeccCCCCCCChh
Q psy17243 256 --LPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQGLGPE 333 (392)
Q Consensus 256 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~~~s~d 333 (392)
..++. ...|....+..... ..+.+ +.......+|+||
T Consensus 322 ~g~~dg~-------------------i~v~~~~~~~~~~~-------------~~~~~---------h~~~v~~~~~s~d 360 (401)
T 4aez_A 322 HGFPDNN-------------------LSIWSYSSSGLTKQ-------------VDIPA---------HDTRVLYSALSPD 360 (401)
T ss_dssp ECTTTCE-------------------EEEEEEETTEEEEE-------------EEEEC---------CSSCCCEEEECTT
T ss_pred eecCCCc-------------------EEEEecCCccceeE-------------EEecC---------CCCCEEEEEECCC
Confidence 22211 12222221110000 00000 1111222268999
Q ss_pred hhhhhcccChHHHHHHhhCCCCCCc
Q psy17243 334 QAALAQSQHFDQLEALWNKKSPPRS 358 (392)
Q Consensus 334 g~~la~s~~~d~~i~~Wd~~~~~~~ 358 (392)
|++|+ +++.||.|++||+.+++..
T Consensus 361 g~~l~-s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 361 GRILS-TAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp SSEEE-EECTTSEEEEEECCC----
T ss_pred CCEEE-EEeCCCcEEEEECCCCccc
Confidence 99998 9999999999999888763
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.4e-37 Score=272.18 Aligned_cols=252 Identities=11% Similarity=0.159 Sum_probs=217.2
Q ss_pred CccCCeEEEEECCCccceeeecc-----CCcCeeEEEecCC----CCeEEEEeCCCeEEEEeCCCCceeEEecccccceE
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEG-----HLNTVSCVAISPN----SIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTIL 72 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~----~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~ 72 (392)
++.++.|++||+.+++.+..+.. |...|++++|+|+ +++|++|+.||.|++||+.+++.+..+..|...|.
T Consensus 40 ~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~ 119 (366)
T 3k26_A 40 TVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAIN 119 (366)
T ss_dssp EEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEE
T ss_pred ECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEE
Confidence 45678999999998888777764 5578999999998 67999999999999999999999999999999999
Q ss_pred EEEEec-CCCEEEEEeCCCeEEEEEcCCceeeeec------ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc-
Q psy17243 73 AVAVLS-DSRRVVTSDKAGVIAVWVADNAQLLYSA------LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD- 144 (392)
Q Consensus 73 ~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~- 144 (392)
+++|+| ++++|++++.||.|++||+.+++.+..+ ...+.+++|+|++++|++++.|+.|++||++.......
T Consensus 120 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 120 ELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHH
T ss_pred EEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccccc
Confidence 999999 8999999999999999999998876653 45789999999999999999999999999975321110
Q ss_pred ------------------------ceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCe--------------E
Q psy17243 145 ------------------------ERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGK--------------L 186 (392)
Q Consensus 145 ------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--------------~ 186 (392)
......|...|.+++|+ +++|++++.|+.|++||+++++ .
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 277 (366)
T 3k26_A 200 KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTI 277 (366)
T ss_dssp HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEE
T ss_pred ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchhe
Confidence 11112388999999998 7799999999999999998764 3
Q ss_pred EEEEecCCCceeEEEEecCC--CcEEEEecCCCeEEEEECCCCcee----eeeccc--ccceeEEEEcCCCeEEEEcC
Q psy17243 187 AQVLVGHTDHVSCVAVAVTN--KSLVVSGSKDSNLIVWDMETGGEE----HFLAGH--LGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 187 ~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~--~~~v~~~~~~~dg~~~~~~~ 256 (392)
+..+..|...|++++|+ ++ +.+|++++.||.|++||+.+++.. ..+..| ...|.+++|+|++++++++.
T Consensus 278 ~~~~~~~~~~v~~~~~s-~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 278 LGRFDYSQCDIWYMRFS-MDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC 354 (366)
T ss_dssp EEEEECSSCCSSCCCCE-ECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred eccccccCCcEEEEEEc-CCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe
Confidence 77888999999999999 45 889999999999999999987643 367777 78999999999999888764
No 72
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.6e-38 Score=274.15 Aligned_cols=236 Identities=14% Similarity=0.166 Sum_probs=191.2
Q ss_pred eeeccCCcCeeEEEecCCCCeE-EEEeC---CCeEEEEeCCCCceeEEe-cccccceEEEEEecC---CCEEEEEeCCCe
Q psy17243 20 STMEGHLNTVSCVAISPNSIFA-VSGSE---DNTAKVWGLTLGSVVSTF-KSHQSTILAVAVLSD---SRRVVTSDKAGV 91 (392)
Q Consensus 20 ~~~~~h~~~v~~~~~~~~~~~l-~~~~~---dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~~d~~ 91 (392)
..+++|...|.+++|+|++..+ ++++. ||.|++||+.+++..... ..|...|.+++|+|+ +++|++++.|+.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 3456799999999999988654 56665 999999999998875443 368999999999998 699999999999
Q ss_pred EEEEEcCCce-eeee---cccceeEEE------EeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeecc----ccceEE
Q psy17243 92 IAVWVADNAQ-LLYS---ALGPSKCLT------VTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSH----SEEITC 157 (392)
Q Consensus 92 i~iwd~~~~~-~~~~---~~~~~~~~~------~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~----~~~v~~ 157 (392)
|++||+.+++ .+.. +...+.++. ++|++++|++++.|+.|++||++.... .......+ ...+.+
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD--PVANMEPVQGENKRDCWT 169 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS--CSEEECCCTTSCCCCEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC--cceeccccCCCCCCceEE
Confidence 9999999876 4443 455778884 578999999999999999999986542 12222222 347888
Q ss_pred EE----EEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecC--CCcEEEEecCCCeEEEEECCCCceee
Q psy17243 158 FT----VTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVT--NKSLVVSGSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 158 ~~----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~ 231 (392)
++ |+|++++|++++.|+.|++||+++++.... ..|...|.+++|+|. ++.+|++++.||.|++||+++++.+.
T Consensus 170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp EEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred EEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 88 678999999999999999999999987554 568899999999953 78899999999999999999877665
Q ss_pred eec-----ccccceeEEEEcCCCe-EEEEcCCC
Q psy17243 232 FLA-----GHLGCVTCVKLAGDGT-VAMSDLPP 258 (392)
Q Consensus 232 ~~~-----~~~~~v~~~~~~~dg~-~~~~~~~~ 258 (392)
.+. +|...|.+++|+|++. +++++..+
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 281 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA 281 (357)
T ss_dssp EEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC
Confidence 554 8999999999999998 77776543
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=269.13 Aligned_cols=242 Identities=15% Similarity=0.190 Sum_probs=205.4
Q ss_pred ccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCC--CCceeEEecccccceEEEEEecC--CCEEEEEeCCCe
Q psy17243 16 HELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLT--LGSVVSTFKSHQSTILAVAVLSD--SRRVVTSDKAGV 91 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 91 (392)
|+++..+.+|...|++++|+|++++|++++.||.|++||+. +++.+..+.+|...|.+++|+++ +++|++++.||.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 45677889999999999999999999999999999999998 66778889999999999999977 899999999999
Q ss_pred EEEEEcCCce--eeee---cccceeEEEEeCC--CCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEc--
Q psy17243 92 IAVWVADNAQ--LLYS---ALGPSKCLTVTHN--MKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTW-- 162 (392)
Q Consensus 92 i~iwd~~~~~--~~~~---~~~~~~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-- 162 (392)
|++||+.+++ .+.. +...+.+++|+|+ +.++++++.|+.|++||++....... .....|...|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-IIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE-EEEECCTTCEEEEEECCCC
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee-EEecCCCCceEEEEEcCcc
Confidence 9999999886 3333 4568899999999 99999999999999999986543332 33457889999999999
Q ss_pred -----------CCCEEEEeeCCCcEEEEEcCCCe----EEEEEecCCCceeEEEEecCC--CcEEEEecCCCeEEEEECC
Q psy17243 163 -----------DSQYLITGSRDMSLKVWQVVGGK----LAQVLVGHTDHVSCVAVAVTN--KSLVVSGSKDSNLIVWDME 225 (392)
Q Consensus 163 -----------~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~iwd~~ 225 (392)
++.+|++++.|+.|++||+++++ ....+.+|...|.+++|+|.. +.+|++++.||.|++||++
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 69999999999999999998764 456778899999999999543 8999999999999999999
Q ss_pred CCc-----eeeeecccccceeEEEEcCCCeEEEEcCCC
Q psy17243 226 TGG-----EEHFLAGHLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 226 ~~~-----~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
+++ .+.....|...|.+++|+|+|++++++..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 240 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred CCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC
Confidence 864 222334488899999999999999887533
No 74
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.9e-38 Score=282.32 Aligned_cols=229 Identities=14% Similarity=0.197 Sum_probs=189.1
Q ss_pred CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc-----------eeEEecccc------------cceEEEEEecCC-
Q psy17243 25 HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS-----------VVSTFKSHQ------------STILAVAVLSDS- 80 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~- 80 (392)
|.+.|++++|+|++++|++|+.||.|+|||+.+++ ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 78999999999999999999999999999999877 577888898 889999999998
Q ss_pred -CEEEEEeCCCeEEEEEcCCcee-------------------------------------------eeecccceeEEEEe
Q psy17243 81 -RRVVTSDKAGVIAVWVADNAQL-------------------------------------------LYSALGPSKCLTVT 116 (392)
Q Consensus 81 -~~l~~~~~d~~i~iwd~~~~~~-------------------------------------------~~~~~~~~~~~~~~ 116 (392)
..|++++.|+.|++||+.+++. ...+...+.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 7999999999999999987543 12355678899999
Q ss_pred CCCCEEEEecCCCcEEEEeCCCCCCCCcc-----eeeeccccceEEEEEEcCC-CEEEEeeCCCcEEEEEcCCCeE----
Q psy17243 117 HNMKYIVSGDGDNSLRIWPTSPQTHKDDE-----RFTVSHSEEITCFTVTWDS-QYLITGSRDMSLKVWQVVGGKL---- 186 (392)
Q Consensus 117 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~---- 186 (392)
|++++|+++ .|+.|++||++........ .....|...|.+++|+|++ ++|++++.||.|++||+++++.
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 999999999 7999999999732111100 0134688899999999998 9999999999999999999886
Q ss_pred EEEEecCCC------------ceeEEEEecCCCcEEEEecCCCeEEEEECCC-Cceeeeecccccce-------------
Q psy17243 187 AQVLVGHTD------------HVSCVAVAVTNKSLVVSGSKDSNLIVWDMET-GGEEHFLAGHLGCV------------- 240 (392)
Q Consensus 187 ~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v------------- 240 (392)
+..+..|.. .|.+++|+ +++.+|++++. +.|++||+++ ++++..+.+|...+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFS-HSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEEC-TTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeEeccCCCccccccccccCceEEEEEEC-CCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 788888876 89999999 68889999988 9999999997 88888888775422
Q ss_pred --eEEEEcCCCeEEEEcC
Q psy17243 241 --TCVKLAGDGTVAMSDL 256 (392)
Q Consensus 241 --~~~~~~~dg~~~~~~~ 256 (392)
..++|+|++++++++.
T Consensus 344 ~~~~~~~s~~~~~l~s~s 361 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGS 361 (447)
T ss_dssp CCCCEEECTTSSEEEEEC
T ss_pred cceEEEECCCCCEEEEec
Confidence 2377777777776654
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=269.79 Aligned_cols=245 Identities=12% Similarity=0.226 Sum_probs=207.3
Q ss_pred CCeEEEEECCCccceeee-ccCCcCeeEEEecCC---CCeEEEEeCCCeEEEEeCCCCc-eeEEecccccceEEEEE---
Q psy17243 5 DCLVNVWQMNSHELQSTM-EGHLNTVSCVAISPN---SIFAVSGSEDNTAKVWGLTLGS-VVSTFKSHQSTILAVAV--- 76 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~---~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~--- 76 (392)
||.|++||+.+++..... .+|...|.+++|+|+ +++|++++.||.|++||+.+++ .+..+..|...|.++.|
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 122 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGG 122 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESG
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccc
Confidence 999999999988766543 369999999999998 6999999999999999999988 88999999999999965
Q ss_pred ---ecCCCEEEEEeCCCeEEEEEcCCce-eeeecc---c----ceeEEE----EeCCCCEEEEecCCCcEEEEeCCCCCC
Q psy17243 77 ---LSDSRRVVTSDKAGVIAVWVADNAQ-LLYSAL---G----PSKCLT----VTHNMKYIVSGDGDNSLRIWPTSPQTH 141 (392)
Q Consensus 77 ---~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~---~----~~~~~~----~~~~~~~l~~~~~d~~i~~~d~~~~~~ 141 (392)
+|++++|++++.|+.|++||+.+++ .+..+. + .+.++. ++++++++++++.|+.|++||++....
T Consensus 123 ~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 123 LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL 202 (357)
T ss_dssp GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE
T ss_pred cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce
Confidence 6789999999999999999999876 444332 2 566777 788999999999999999999975432
Q ss_pred CCcceeeeccccceEEEEEEc---CCCEEEEeeCCCcEEEEEcCCCeEEEEEe-----cCCCceeEEEEecCCCcEEEEe
Q psy17243 142 KDDERFTVSHSEEITCFTVTW---DSQYLITGSRDMSLKVWQVVGGKLAQVLV-----GHTDHVSCVAVAVTNKSLVVSG 213 (392)
Q Consensus 142 ~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~ 213 (392)
.....+...|.+++|+| ++++|++++.||.|++||+++++....+. +|...|++++|+|.+..+|+++
T Consensus 203 ----~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 203 ----RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp ----EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred ----eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEE
Confidence 33456889999999999 89999999999999999998876554443 8999999999995444489999
Q ss_pred cCCCeEEEEECCCC-------------------ceeeeecccccceeEEEEcCCCeEEE
Q psy17243 214 SKDSNLIVWDMETG-------------------GEEHFLAGHLGCVTCVKLAGDGTVAM 253 (392)
Q Consensus 214 ~~dg~i~iwd~~~~-------------------~~~~~~~~~~~~v~~~~~~~dg~~~~ 253 (392)
+.||.|++||++++ +.+..+.+|...|.+++|+|+|++++
T Consensus 279 ~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 337 (357)
T 3i2n_A 279 GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC 337 (357)
T ss_dssp ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE
T ss_pred eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEE
Confidence 99999999999854 35667788999999999999988776
No 76
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.3e-37 Score=273.11 Aligned_cols=321 Identities=14% Similarity=0.149 Sum_probs=222.2
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecC-CCCeEEEEeCCCeEEEEeCCCCceeEEec-------------ccccc
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISP-NSIFAVSGSEDNTAKVWGLTLGSVVSTFK-------------SHQST 70 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-------------~~~~~ 70 (392)
++.+++|+++..+....+.+|.+.|++++|+| ++++|++++.||.|++||+++++....+. +|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 45678898888888899999999999999999 99999999999999999999887655443 58999
Q ss_pred eEEEEEec-CCCEEEEEeCCCeEEEEEcCCceeeee--cccceeEEEEeCC---CCEEEEecCCCcEEEEeCCCCCCCCc
Q psy17243 71 ILAVAVLS-DSRRVVTSDKAGVIAVWVADNAQLLYS--ALGPSKCLTVTHN---MKYIVSGDGDNSLRIWPTSPQTHKDD 144 (392)
Q Consensus 71 v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~ 144 (392)
|.+++|+| ++.+|++++.|+.|++||+.+++.+.. ....+.++.+++. +.++++++.++.|++||++.. ..
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~---~~ 178 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG---SC 178 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS---CC
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc---ce
Confidence 99999999 778999999999999999999887654 4557788888884 459999999999999999744 33
Q ss_pred ceeeeccccceEEEEEEcCCC-EEEEeeCCCcEEEEEcCCCe-EEEEE---------------ecCCCceeEEEEecCCC
Q psy17243 145 ERFTVSHSEEITCFTVTWDSQ-YLITGSRDMSLKVWQVVGGK-LAQVL---------------VGHTDHVSCVAVAVTNK 207 (392)
Q Consensus 145 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~ 207 (392)
......|...|.+++|+|+++ +|++++.||.|++||++++. ++..+ ..|...|.+++|+ +++
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~ 257 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-SDG 257 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC-TTS
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc-CCC
Confidence 444557899999999999988 58999999999999998765 44444 5688999999999 678
Q ss_pred cEEEEecCCCeEEEEECCCCceeeeeccccc------ceeE---------EEEcCCCeEEEEcCCCCCCCCCCCcccccc
Q psy17243 208 SLVVSGSKDSNLIVWDMETGGEEHFLAGHLG------CVTC---------VKLAGDGTVAMSDLPPSRPAGPKRPLRRLL 272 (392)
Q Consensus 208 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~v~~---------~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~ 272 (392)
.+|++++.||.|++||+.+++....+..+.. .... +....++.+.+++....+. .
T Consensus 258 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~------~---- 327 (408)
T 4a11_B 258 LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQ------I---- 327 (408)
T ss_dssp SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCE------E----
T ss_pred CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcc------e----
Confidence 8999999999999999998876554432211 1111 1112345555554322110 0
Q ss_pred ccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecceeccCCCC----------CCChhhhhhhcccC
Q psy17243 273 KKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQ----------GLGPEQAALAQSQH 342 (392)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~----------~~s~dg~~la~s~~ 342 (392)
....+|...+..+. ..+++.++++++.|+.+++|........ .+.|.......+.+
T Consensus 328 -----------~~~~~~~~~v~~~~---~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (408)
T 4a11_B 328 -----------TMLKGHYKTVDCCV---FQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKSQLNPAFEDAWSSSD 393 (408)
T ss_dssp -----------EEECCCSSCEEEEE---EETTTTEEEEEETTSCEEEEEECC----------------------------
T ss_pred -----------eeeccCCCeEEEEE---EcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEeccccccccceeecccC
Confidence 11113333333322 2345667888888888888876533211 33444333444667
Q ss_pred hHHHHHHhhCC
Q psy17243 343 FDQLEALWNKK 353 (392)
Q Consensus 343 ~d~~i~~Wd~~ 353 (392)
.|+.+++|+..
T Consensus 394 ~~~~~~~W~~~ 404 (408)
T 4a11_B 394 EEGGTSAWSHP 404 (408)
T ss_dssp -----------
T ss_pred ccCceeecCCc
Confidence 78888888654
No 77
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.6e-36 Score=265.36 Aligned_cols=224 Identities=15% Similarity=0.131 Sum_probs=195.8
Q ss_pred CCccCCeEEEEECCCcc--ceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEE--ecccccceEEEEE
Q psy17243 1 MGGMDCLVNVWQMNSHE--LQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVST--FKSHQSTILAVAV 76 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~--~~~~~~~v~~~~~ 76 (392)
+|+.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+++++.... +..|...|.+++|
T Consensus 25 ~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 104 (372)
T 1k8k_C 25 ICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW 104 (372)
T ss_dssp EECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE
T ss_pred EEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEE
Confidence 36789999999999887 8888999999999999999999999999999999999998875544 3568999999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCcee---ee----ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCC---------
Q psy17243 77 LSDSRRVVTSDKAGVIAVWVADNAQL---LY----SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQT--------- 140 (392)
Q Consensus 77 ~~~~~~l~~~~~d~~i~iwd~~~~~~---~~----~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~--------- 140 (392)
+|++++|++++.++.|++||++.++. .. .+...+.+++|+|++++|++++.|+.|++||++...
T Consensus 105 ~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~ 184 (372)
T 1k8k_C 105 APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP 184 (372)
T ss_dssp CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBT
T ss_pred CCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccc
Confidence 99999999999999999999988752 21 235678999999999999999999999999975221
Q ss_pred ------CCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEec
Q psy17243 141 ------HKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 141 ------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 214 (392)
..........|...|.+++|+|++++|++++.|+.|++||+++++++..+..|...|.+++|+ +++.+++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~- 262 (372)
T 1k8k_C 185 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFI-TESSLVAAG- 262 (372)
T ss_dssp TBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEE-ETTEEEEEE-
T ss_pred cccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEe-cCCCEEEEE-
Confidence 122333344788899999999999999999999999999999999999999999999999999 567788877
Q ss_pred CCCeEEEEECCC
Q psy17243 215 KDSNLIVWDMET 226 (392)
Q Consensus 215 ~dg~i~iwd~~~ 226 (392)
.|+.|++|++.+
T Consensus 263 ~d~~i~i~~~~~ 274 (372)
T 1k8k_C 263 HDCFPVLFTYDS 274 (372)
T ss_dssp TTSSCEEEEEET
T ss_pred eCCeEEEEEccC
Confidence 899999999987
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.9e-38 Score=279.17 Aligned_cols=235 Identities=14% Similarity=0.162 Sum_probs=196.4
Q ss_pred eccCCcCeeEEEecCC----CCeEEEEeCCCeEEEEeCCCCceeEEecc-----cccceEEEEEecC----CCEEEEEeC
Q psy17243 22 MEGHLNTVSCVAISPN----SIFAVSGSEDNTAKVWGLTLGSVVSTFKS-----HQSTILAVAVLSD----SRRVVTSDK 88 (392)
Q Consensus 22 ~~~h~~~v~~~~~~~~----~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~ 88 (392)
..+|..+|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|+ +++|++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4579999999999984 45666677778999999998888777764 4577999999999 669999999
Q ss_pred CCeEEEEEcCCceeeee---cccceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCC
Q psy17243 89 AGVIAVWVADNAQLLYS---ALGPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDS 164 (392)
Q Consensus 89 d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 164 (392)
||.|++||+.+++.+.. +...+.+++|+| ++++|++++.||.|++||++.............|...|.+++|+|++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 99999999999887654 445789999999 99999999999999999997543222211114789999999999999
Q ss_pred CEEEEeeCCCcEEEEEcCCCeEEEEEe----------------------------cCCCceeEEEEecCCCcEEEEecCC
Q psy17243 165 QYLITGSRDMSLKVWQVVGGKLAQVLV----------------------------GHTDHVSCVAVAVTNKSLVVSGSKD 216 (392)
Q Consensus 165 ~~l~~~~~dg~i~i~d~~~~~~~~~~~----------------------------~~~~~v~~~~~~~~~~~~l~~~~~d 216 (392)
++|++++.||.|++||+++++....+. .|...|.+++|+ +.++++++.|
T Consensus 174 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d 250 (366)
T 3k26_A 174 EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCE 250 (366)
T ss_dssp SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSS
T ss_pred CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecC
Confidence 999999999999999998775443332 389999999998 5699999999
Q ss_pred CeEEEEECCCCce--------------eeeecccccceeEEEEcCC--CeEEEEcCCCC
Q psy17243 217 SNLIVWDMETGGE--------------EHFLAGHLGCVTCVKLAGD--GTVAMSDLPPS 259 (392)
Q Consensus 217 g~i~iwd~~~~~~--------------~~~~~~~~~~v~~~~~~~d--g~~~~~~~~~~ 259 (392)
+.|++||+.+++. +..+..|...|.+++|+|+ +++++++..++
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg 309 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG 309 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC
Confidence 9999999988754 6778889999999999999 99999886543
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-35 Score=255.89 Aligned_cols=243 Identities=17% Similarity=0.271 Sum_probs=213.1
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCC---ceeEEecccccceEEEEEe
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLG---SVVSTFKSHQSTILAVAVL 77 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~ 77 (392)
+|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.||.|++|++... +.+..+..|...|.++.|
T Consensus 34 s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 112 (313)
T 3odt_A 34 SVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF- 112 (313)
T ss_dssp EEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE-
T ss_pred EEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe-
Confidence 4789999999999999999999999999999999999999999999999999998764 567788889999999999
Q ss_pred cCCCEEEEEeCCCeEEEEEcCCceee---eecccceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCCCcceeeecccc
Q psy17243 78 SDSRRVVTSDKAGVIAVWVADNAQLL---YSALGPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSE 153 (392)
Q Consensus 78 ~~~~~l~~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 153 (392)
+++++++++.|+.|++|| .++.+ ..+..++.++.+.| +++.+++++.|+.|++||.. .........+..
T Consensus 113 -~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~ 185 (313)
T 3odt_A 113 -QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND----KVIKTFSGIHND 185 (313)
T ss_dssp -ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT----EEEEEECSSCSS
T ss_pred -cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC----ceEEEEeccCcc
Confidence 577999999999999999 33333 33556788899888 99999999999999999943 222233334889
Q ss_pred ceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeee
Q psy17243 154 EITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 154 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 233 (392)
.+.+++|+|++. +++++.|+.|++||+++++++..+.+|...|++++|+| ++ .|++++.||.|++||+.+++.+..+
T Consensus 186 ~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSLKQVI 262 (313)
T ss_dssp CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCEEEEE
T ss_pred cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec-CC-CEEEEecCCEEEEEECCCCceeEEE
Confidence 999999999987 99999999999999999999999999999999999994 45 5888999999999999999999999
Q ss_pred cccccceeEEEEcCCCeEEEE
Q psy17243 234 AGHLGCVTCVKLAGDGTVAMS 254 (392)
Q Consensus 234 ~~~~~~v~~~~~~~dg~~~~~ 254 (392)
..|...|.+++|+|++++++.
T Consensus 263 ~~~~~~i~~~~~~~~~~~~~~ 283 (313)
T 3odt_A 263 TLPAISIWSVDCMSNGDIIVG 283 (313)
T ss_dssp ECSSSCEEEEEECTTSCEEEE
T ss_pred eccCceEEEEEEccCCCEEEE
Confidence 999999999999999986554
No 80
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.1e-35 Score=256.15 Aligned_cols=249 Identities=24% Similarity=0.390 Sum_probs=212.5
Q ss_pred CCccCCeEEEEECCCcc-----ceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEE
Q psy17243 1 MGGMDCLVNVWQMNSHE-----LQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVA 75 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 75 (392)
||+.||+|+|||+.+.+ ....+.+|...|.+++|+|++++|++++.|+.|++|+............+...+..+.
T Consensus 56 S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (340)
T 4aow_A 56 SASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVA 135 (340)
T ss_dssp EEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEE
Confidence 58899999999987643 4567889999999999999999999999999999999999999888888899999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEcCCceeee----ecccceeEEEEeCCC--CEEEEecCCCcEEEEeCCCCCCCCcceeee
Q psy17243 76 VLSDSRRVVTSDKAGVIAVWVADNAQLLY----SALGPSKCLTVTHNM--KYIVSGDGDNSLRIWPTSPQTHKDDERFTV 149 (392)
Q Consensus 76 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 149 (392)
+.+++++|++++.|+.+++||+....... .+...+.++.+++++ .++++++.|+.|++||++.. .......
T Consensus 136 ~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---~~~~~~~ 212 (340)
T 4aow_A 136 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC---KLKTNHI 212 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT---EEEEEEC
T ss_pred EeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC---ceeeEec
Confidence 99999999999999999999998765433 234567788887754 57889999999999999743 3444556
Q ss_pred ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCce
Q psy17243 150 SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGE 229 (392)
Q Consensus 150 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 229 (392)
+|...|++++|+|++++|++++.|+.|++||+++.+++..+.. ...+.+++|+ +++.+ ++++.|+.|++||++++..
T Consensus 213 ~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~-~~~~~-~~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 213 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFS-PNRYW-LCAATGPSIKIWDLEGKII 289 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEEEEEC-SSSSE-EEEEETTEEEEEETTTTEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEeeecC-CCCce-eeccCCCEEEEEECCCCeE
Confidence 7899999999999999999999999999999999999988874 5689999999 55554 5566799999999998876
Q ss_pred eeeec---------ccccceeEEEEcCCCeEEEEc
Q psy17243 230 EHFLA---------GHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 230 ~~~~~---------~~~~~v~~~~~~~dg~~~~~~ 255 (392)
+..+. +|...|++++|+|||++++++
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 324 (340)
T 4aow_A 290 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG 324 (340)
T ss_dssp EEEECCC-------CCCCCEEEEEECTTSSEEEEE
T ss_pred EEeccccceeeeccCCCCCEEEEEECCCCCEEEEE
Confidence 65543 577889999999998887775
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-38 Score=285.14 Aligned_cols=236 Identities=8% Similarity=-0.015 Sum_probs=191.6
Q ss_pred CCcCeeEEEecCCC---------CeEEE-------------------EeCCCeEEEEeCCCCcee----EEecccccceE
Q psy17243 25 HLNTVSCVAISPNS---------IFAVS-------------------GSEDNTAKVWGLTLGSVV----STFKSHQSTIL 72 (392)
Q Consensus 25 h~~~v~~~~~~~~~---------~~l~~-------------------~~~dg~v~iwd~~~~~~~----~~~~~~~~~v~ 72 (392)
+.+.|.+|+|+|++ ++||+ ++.|++|+|||+.+++.. ..+..|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 67889999999876 56666 457889999999887643 34566788999
Q ss_pred EEEEecC------CCEEEEEeCCCeEEEEEcCCcee--------------eeecccceeEEEEeCCCCEEEEecCCCcEE
Q psy17243 73 AVAVLSD------SRRVVTSDKAGVIAVWVADNAQL--------------LYSALGPSKCLTVTHNMKYIVSGDGDNSLR 132 (392)
Q Consensus 73 ~~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 132 (392)
+++|+|+ +.+|++++.||+|++||+.++.. +..+...+.+++|+++ ..|++|+.||.|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999996 57999999999999999986632 1224467899999986 4899999999999
Q ss_pred EEeCCCCCCCCcceeeeccccceEEE--EEEcCC-CEEEEeeCCCcEEEEEcCCCeEEEEEecCCC--ceeEEEEecCCC
Q psy17243 133 IWPTSPQTHKDDERFTVSHSEEITCF--TVTWDS-QYLITGSRDMSLKVWQVVGGKLAQVLVGHTD--HVSCVAVAVTNK 207 (392)
Q Consensus 133 ~~d~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~ 207 (392)
+||+++.. ........|...|.++ +|+|++ .+|++++.|++|++||++++++...+.+|.. .|.+++|+ +++
T Consensus 291 lWD~~~~~--~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs-p~~ 367 (524)
T 2j04_B 291 EFDLTDPE--VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC-PQI 367 (524)
T ss_dssp EEETTBCS--SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE-TTT
T ss_pred EEECCCCC--CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeC-CCc
Confidence 99997542 2233455799999999 567887 8999999999999999999887777776653 57899999 567
Q ss_pred cEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCCCCCCCCC
Q psy17243 208 SLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGP 264 (392)
Q Consensus 208 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~ 264 (392)
..+++++.|++|++||++++.++..+.+|.+.|++++|+|+|++++++..++....+
T Consensus 368 ~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lw 424 (524)
T 2j04_B 368 YSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIIT 424 (524)
T ss_dssp TEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECC
T ss_pred CeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEE
Confidence 789999999999999999999888899999999999999999999999877665444
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.1e-36 Score=265.10 Aligned_cols=251 Identities=14% Similarity=0.217 Sum_probs=209.1
Q ss_pred CCccCCeEEEEECCCccceeeec--cCCcCeeEEEecC-CCCeEEEEeCCCeEEEEeCCCCceeEEeccc---ccceEEE
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTME--GHLNTVSCVAISP-NSIFAVSGSEDNTAKVWGLTLGSVVSTFKSH---QSTILAV 74 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~---~~~v~~~ 74 (392)
+|+.||.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.|++||++. ..+..+..+ ...|.++
T Consensus 91 s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~ 169 (383)
T 3ei3_B 91 VGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCV 169 (383)
T ss_dssp EEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEE
T ss_pred EEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEE
Confidence 47889999999999888877765 6999999999999 789999999999999999986 555555443 4789999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEcCCceeee---ecccceeEEEEeCCCC-EEEEecCCCcEEEEeCCCCCCCCcceeeec
Q psy17243 75 AVLSDSRRVVTSDKAGVIAVWVADNAQLLY---SALGPSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQTHKDDERFTVS 150 (392)
Q Consensus 75 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 150 (392)
+|+|++++|++++.|+.|++||+. ++.+. .+...+.+++|+|+++ ++++++.|+.|++||++.............
T Consensus 170 ~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 248 (383)
T 3ei3_B 170 DVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP 248 (383)
T ss_dssp EEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE
T ss_pred EECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec
Confidence 999999999999999999999995 44433 3456889999999999 999999999999999986544344444447
Q ss_pred cccceEEEEEEc-CCCEEEEeeCCCcEEEEEcCCCeEEEEEecCC-------C----------ceeEEEEecCCCcEEEE
Q psy17243 151 HSEEITCFTVTW-DSQYLITGSRDMSLKVWQVVGGKLAQVLVGHT-------D----------HVSCVAVAVTNKSLVVS 212 (392)
Q Consensus 151 ~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------~----------~v~~~~~~~~~~~~l~~ 212 (392)
|...|.+++|+| ++++|++++.|+.|++||+++++....+.+|. . .+..++|+ +++.+ +
T Consensus 249 ~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s-~dg~~--s 325 (383)
T 3ei3_B 249 HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRY-PDDQL--L 325 (383)
T ss_dssp CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECB-CCTTT--C
T ss_pred CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEec-CCccc--c
Confidence 899999999999 99999999999999999999887766666543 2 23345555 34444 7
Q ss_pred ecCCCeEEEEECCCCceeeeecc--cccceeEEEEcCCCeEEEEcC
Q psy17243 213 GSKDSNLIVWDMETGGEEHFLAG--HLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 213 ~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~dg~~~~~~~ 256 (392)
++.|+.|++||+.+++.+..+.+ |...+..++|+|+|++++++.
T Consensus 326 ~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 326 LNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp TTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred cCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 78999999999999999999887 456788889999999999974
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-35 Score=263.65 Aligned_cols=252 Identities=17% Similarity=0.241 Sum_probs=217.4
Q ss_pred CCccCCeEEEEECCCccceeeecc-CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEG-HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSD 79 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 79 (392)
+++.||.|++||+.+++....+.. |...|.+++|+|++++|++|+.||.|++||+++++.+..+..|...|.+++|+
T Consensus 108 ~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-- 185 (401)
T 4aez_A 108 AVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN-- 185 (401)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--
T ss_pred EEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--
Confidence 467899999999999998888776 89999999999999999999999999999999999999999999999999994
Q ss_pred CCEEEEEeCCCeEEEEEcCC-cee---eeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccce
Q psy17243 80 SRRVVTSDKAGVIAVWVADN-AQL---LYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEI 155 (392)
Q Consensus 80 ~~~l~~~~~d~~i~iwd~~~-~~~---~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v 155 (392)
++.+++++.||.|++||++. ... +..+...+.+++|+|++++|++++.|+.|++||++. .........|...|
T Consensus 186 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~---~~~~~~~~~~~~~v 262 (401)
T 4aez_A 186 RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS---SIPKFTKTNHNAAV 262 (401)
T ss_dssp TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC---SSEEEEECCCSSCC
T ss_pred CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC---CCccEEecCCcceE
Confidence 57999999999999999984 333 334566889999999999999999999999999974 33334445788999
Q ss_pred EEEEEEcCC-CEEEEee--CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEE--ecCCCeEEEEECCCCcee
Q psy17243 156 TCFTVTWDS-QYLITGS--RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVS--GSKDSNLIVWDMETGGEE 230 (392)
Q Consensus 156 ~~~~~~~~~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~ 230 (392)
.+++|+|++ .++++++ .|+.|++||+++++++..+. +...+.+++|+ +++.++++ |+.||.|++||+.+++..
T Consensus 263 ~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s-~~~~~l~~~~g~~dg~i~v~~~~~~~~~ 340 (401)
T 4aez_A 263 KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWS-PHSKEIMSTHGFPDNNLSIWSYSSSGLT 340 (401)
T ss_dssp CEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEC-SSSSEEEEEECTTTCEEEEEEEETTEEE
T ss_pred EEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEEC-CCCCeEEEEeecCCCcEEEEecCCccce
Confidence 999999976 4566654 79999999999999988886 67889999999 56777777 558999999999986654
Q ss_pred e--eecccccceeEEEEcCCCeEEEEcCCCC
Q psy17243 231 H--FLAGHLGCVTCVKLAGDGTVAMSDLPPS 259 (392)
Q Consensus 231 ~--~~~~~~~~v~~~~~~~dg~~~~~~~~~~ 259 (392)
. .+.+|...|.+++|+|+|++++++..++
T Consensus 341 ~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 341 KQVDIPAHDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp EEEEEECCSSCCCEEEECTTSSEEEEECTTS
T ss_pred eEEEecCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 4 4678999999999999999999986543
No 84
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.9e-36 Score=268.84 Aligned_cols=252 Identities=16% Similarity=0.172 Sum_probs=209.9
Q ss_pred CCccCCeEEEEECCCc----cceeeeccCCcCeeEEEecC-CCCeEEEEeCCCeEEEEeCCCC-------ceeEEecccc
Q psy17243 1 MGGMDCLVNVWQMNSH----ELQSTMEGHLNTVSCVAISP-NSIFAVSGSEDNTAKVWGLTLG-------SVVSTFKSHQ 68 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~-------~~~~~~~~~~ 68 (392)
+|+.||.|+||++.+. +....+.+|...|++++|+| ++++|++|+.||.|++||+.++ +.+..+.+|.
T Consensus 52 ~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~ 131 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131 (402)
T ss_dssp CCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS
T ss_pred EEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC
Confidence 4788999999999653 34556788999999999999 8999999999999999999988 6678889999
Q ss_pred cceEEEEEecCC-CEEEEEeCCCeEEEEEcCCceeeeec-----ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCC
Q psy17243 69 STILAVAVLSDS-RRVVTSDKAGVIAVWVADNAQLLYSA-----LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHK 142 (392)
Q Consensus 69 ~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 142 (392)
..|.+++|+|++ ++|++++.|+.|++||+.+++.+..+ ...+.+++|+|++++|++++.|+.|++||++...
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-- 209 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT-- 209 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE--
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc--
Confidence 999999999998 69999999999999999999887655 4578999999999999999999999999998533
Q ss_pred Ccceee-eccccc-eEEEEEEcCCCEEEEe---eCCCcEEEEEcCCCeE-EEEEe-cCCCceeEEEEecCCCcEEEEecC
Q psy17243 143 DDERFT-VSHSEE-ITCFTVTWDSQYLITG---SRDMSLKVWQVVGGKL-AQVLV-GHTDHVSCVAVAVTNKSLVVSGSK 215 (392)
Q Consensus 143 ~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~ 215 (392)
..... ..|... +.++.|+|++++|++| +.|+.|++||+++++. +.... .|...+.+++|+|.+..++++++.
T Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 210 -VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp -EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT
T ss_pred -eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC
Confidence 22222 355554 8999999999999999 7899999999988654 33332 577889999999544444457778
Q ss_pred CCeEEEEECCCCce-eeeecc--cccceeEEEEcCCCeEEEEc
Q psy17243 216 DSNLIVWDMETGGE-EHFLAG--HLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 216 dg~i~iwd~~~~~~-~~~~~~--~~~~v~~~~~~~dg~~~~~~ 255 (392)
||.|++||+.+++. +..+.. |...|.+++|+|++.+++++
T Consensus 289 dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~ 331 (402)
T 2aq5_A 289 DSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNK 331 (402)
T ss_dssp CSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGG
T ss_pred CCeEEEEEecCCCcceEeecccccCCcccceEEecccccceec
Confidence 99999999998884 444444 45899999999999887654
No 85
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=249.90 Aligned_cols=250 Identities=18% Similarity=0.278 Sum_probs=210.8
Q ss_pred ccCCeEEEEECCCccceeeec--cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 3 GMDCLVNVWQMNSHELQSTME--GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+.|++|+|||+++++.++.++ +|...|++++|+|++++|++|+.||+|++||+++++.+..+.+|...+.++.+ ++
T Consensus 42 g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~ 119 (318)
T 4ggc_A 42 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NS 119 (318)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ET
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CC
Confidence 569999999999999888765 57888999999999999999999999999999999999999999998887665 56
Q ss_pred CEEEEEeCCCeEEEEEcCCcee----eeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCC-cceeeeccccce
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQL----LYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKD-DERFTVSHSEEI 155 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~~~~~~~~~~~v 155 (392)
..+++++.++.+++|+...... +..+...+..+.+.++++++++++.|+.|++||+++.+... .......+...|
T Consensus 120 ~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v 199 (318)
T 4ggc_A 120 YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV 199 (318)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCE
T ss_pred CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCce
Confidence 7999999999999999887643 23455678899999999999999999999999998654432 233445677889
Q ss_pred EEEEEEcCCCE---EEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEE-ecCCCeEEEEECCCCceee
Q psy17243 156 TCFTVTWDSQY---LITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVS-GSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 156 ~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~ 231 (392)
.++.++|++.. +++++.++.|++||.+......... +...+..+.|+|....++++ |+.|+.|++||+++++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~ 278 (318)
T 4ggc_A 200 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA 278 (318)
T ss_dssp EEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE
T ss_pred EEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE
Confidence 99999997653 3466778999999999887766654 67789999999655554443 4579999999999999999
Q ss_pred eecccccceeEEEEcCCCeEEEEc
Q psy17243 232 FLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 232 ~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
.+.+|.+.|++++|+|||++++++
T Consensus 279 ~l~gH~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 279 ELKGHTSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEE
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEE
Confidence 999999999999999999877764
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-36 Score=287.35 Aligned_cols=242 Identities=15% Similarity=0.188 Sum_probs=205.0
Q ss_pred eeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCC--CCceeEEecccccceEEEEEecC--CCEEEEEeCCCeEEE
Q psy17243 19 QSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLT--LGSVVSTFKSHQSTILAVAVLSD--SRRVVTSDKAGVIAV 94 (392)
Q Consensus 19 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i 94 (392)
+..+.+|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+.+|..+|.+++|+|+ +++|++++.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 35678999999999999999999999999999999998 55778889999999999999988 999999999999999
Q ss_pred EEcCCce--eee---ecccceeEEEEeCC--CCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEc-----
Q psy17243 95 WVADNAQ--LLY---SALGPSKCLTVTHN--MKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTW----- 162 (392)
Q Consensus 95 wd~~~~~--~~~---~~~~~~~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~----- 162 (392)
||+.+++ .+. .+..++.+++|+|+ ++.+++++.||.|++||++........ ....|...|.+++|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~-~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-EEECCSSCEEEEEECCCC---
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-EeecCCCceEEEEecCccccc
Confidence 9999885 333 34568899999999 999999999999999999865433333 3457889999999999
Q ss_pred --------CCCEEEEeeCCCcEEEEEcCCC----eEEEEEecCCCceeEEEEecCC--CcEEEEecCCCeEEEEECCCCc
Q psy17243 163 --------DSQYLITGSRDMSLKVWQVVGG----KLAQVLVGHTDHVSCVAVAVTN--KSLVVSGSKDSNLIVWDMETGG 228 (392)
Q Consensus 163 --------~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~ 228 (392)
++++|++|+.||.|++||++++ .....+.+|...|++++|+|.+ +.+|++++.||.|++||+.+++
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 5899999999999999999877 5667788999999999999543 8999999999999999999864
Q ss_pred -----eeeeecccccceeEEEEcCCCeEEEEcCCCCCC
Q psy17243 229 -----EEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRP 261 (392)
Q Consensus 229 -----~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~ 261 (392)
.......|...|.+++|+|+|++++++..++..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I 278 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV 278 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCE
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEE
Confidence 333445688899999999999999987655443
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8.7e-36 Score=267.20 Aligned_cols=281 Identities=17% Similarity=0.251 Sum_probs=216.1
Q ss_pred CeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec--ccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeee
Q psy17243 28 TVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK--SHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYS 105 (392)
Q Consensus 28 ~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 105 (392)
.++.|+|++++ +|++|. |++|+|||..+++....+. .|...|++++|+|++++|++|+.||.|++||+++++.+..
T Consensus 107 y~~~l~wS~~n-~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 46779999864 677764 9999999999999877664 5778899999999999999999999999999999998877
Q ss_pred cccce-eEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCC
Q psy17243 106 ALGPS-KCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGG 184 (392)
Q Consensus 106 ~~~~~-~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 184 (392)
..++. ...+++.++..+++++.|+.+++||.... .........|...+..+.++|+++++++++.|+.+++|+..++
T Consensus 185 ~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~--~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 185 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EeCCCCceEEEeeCCCEEEEEeCCCceeEeeeccc--ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 65432 23344556789999999999999998743 2333445688999999999999999999999999999999876
Q ss_pred e----EEEEEecCCCceeEEEEecCCCcEEEE--ecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcC--
Q psy17243 185 K----LAQVLVGHTDHVSCVAVAVTNKSLVVS--GSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDL-- 256 (392)
Q Consensus 185 ~----~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~-- 256 (392)
+ .+.....|...|.+++|+|.+..++++ |+.|++|++||+.+++++..+..| ..+.++.|++++..++++.
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~ 341 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGF 341 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECT
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEec
Confidence 4 456677899999999999888888776 457999999999999998888754 5788999999998887643
Q ss_pred CCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecceeccCCCCCCChhhhh
Q psy17243 257 PPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQGLGPEQAA 336 (392)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~~~s~dg~~ 336 (392)
.++. ...|....+.... .+.+ +...+...+|+|||++
T Consensus 342 ~d~~-------------------I~iwd~~~~~~v~---------------~l~g---------H~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 342 AQNQ-------------------LVIWKYPTMAKVA---------------ELKG---------HTSRVLSLTMSPDGAT 378 (420)
T ss_dssp TTCC-------------------EEEEETTTCCEEE---------------EECC---------CSSCEEEEEECTTSSC
T ss_pred CCCE-------------------EEEEECCCCcEEE---------------EEcC---------CCCCEEEEEEcCCCCE
Confidence 1111 1222221111000 0000 0001111268999999
Q ss_pred hhcccChHHHHHHhhCCCCCC
Q psy17243 337 LAQSQHFDQLEALWNKKSPPR 357 (392)
Q Consensus 337 la~s~~~d~~i~~Wd~~~~~~ 357 (392)
|| |++.|++|+|||+.+...
T Consensus 379 l~-S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 379 VA-SAAADETLRLWRCFELDP 398 (420)
T ss_dssp EE-EEETTTEEEEECCSCSSC
T ss_pred EE-EEecCCeEEEEECCCCCc
Confidence 98 999999999999976554
No 88
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.1e-36 Score=271.24 Aligned_cols=255 Identities=16% Similarity=0.195 Sum_probs=205.5
Q ss_pred CCccCCeEEEEECCCcccee--eeccCCcCeeEEEecC-CCCeEEEEeCCCeEEEEeCCCCceeEEecc--cccceEEEE
Q psy17243 1 MGGMDCLVNVWQMNSHELQS--TMEGHLNTVSCVAISP-NSIFAVSGSEDNTAKVWGLTLGSVVSTFKS--HQSTILAVA 75 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~v~~~~ 75 (392)
+|+.||.|+|||+.+++... .+.+|.+.|++++|+| ++.+|++|+.||+|++||++++........ +...+.+++
T Consensus 137 sGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 216 (435)
T 4e54_B 137 VGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLD 216 (435)
T ss_dssp EEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEE
T ss_pred EEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEE
Confidence 58899999999998766443 4568999999999998 688999999999999999987654433332 344678999
Q ss_pred EecCCCEEEEEeCCCeEEEEEcCCcee--eeecccceeEEEEeCCCC-EEEEecCCCcEEEEeCCCCCCCCcceeeeccc
Q psy17243 76 VLSDSRRVVTSDKAGVIAVWVADNAQL--LYSALGPSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQTHKDDERFTVSHS 152 (392)
Q Consensus 76 ~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 152 (392)
|+|++++|++|+.||.|++||++.... +..+...+.+++|+|++. ++++++.|+.|++||++.............|.
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~ 296 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHR 296 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCS
T ss_pred ECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecc
Confidence 999999999999999999999976433 234556899999999876 78899999999999998766655555556789
Q ss_pred cceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCC------ceeEEEEecCCCcEEEEe------------c
Q psy17243 153 EEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTD------HVSCVAVAVTNKSLVVSG------------S 214 (392)
Q Consensus 153 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~------------~ 214 (392)
..|++++|+|++++|++++.||.|++||+++++....+..|.. .+....|+| ++.+++++ .
T Consensus 297 ~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~ 375 (435)
T 4e54_B 297 HPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHP-RYNLIVVGRYPDPNFKSCTPY 375 (435)
T ss_dssp SCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECS-SSSCEEEECCCCTTSCCSSTT
T ss_pred ccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcC-CCCEEEEEEcCCCCeEEEEec
Confidence 9999999999999999999999999999999988777766543 223445663 33333333 2
Q ss_pred CCCeEEEEECCCCceeeeec-ccccceeEE-EEcCCCeEEEEcC
Q psy17243 215 KDSNLIVWDMETGGEEHFLA-GHLGCVTCV-KLAGDGTVAMSDL 256 (392)
Q Consensus 215 ~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~-~~~~dg~~~~~~~ 256 (392)
.++.|++||..+++.+..+. +|...|.++ +|+|+|++++++.
T Consensus 376 ~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~ 419 (435)
T 4e54_B 376 ELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM 419 (435)
T ss_dssp CCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC
T ss_pred CCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc
Confidence 34679999999999888764 677888887 6999999999875
No 89
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.2e-35 Score=268.20 Aligned_cols=316 Identities=20% Similarity=0.336 Sum_probs=246.4
Q ss_pred ceeeeccCCcCe-eEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEE
Q psy17243 18 LQSTMEGHLNTV-SCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWV 96 (392)
Q Consensus 18 ~~~~~~~h~~~v-~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 96 (392)
....+.+|...| .++.+ ++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++ .+++++.||.|++||
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 455788998885 66665 56799999999999999999999999999999999999999888 999999999999999
Q ss_pred cCCceeeeec---ccceeEEEEe--CCCCEEEEecCCCcEEEEeCCCCCCCCc--------------------ceeeecc
Q psy17243 97 ADNAQLLYSA---LGPSKCLTVT--HNMKYIVSGDGDNSLRIWPTSPQTHKDD--------------------ERFTVSH 151 (392)
Q Consensus 97 ~~~~~~~~~~---~~~~~~~~~~--~~~~~l~~~~~d~~i~~~d~~~~~~~~~--------------------~~~~~~~ 151 (392)
+++++.+..+ ...+.++.++ ++++++++++.|+.|++||+........ .....+|
T Consensus 190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 9999877654 4578888888 5789999999999999999986543221 2334467
Q ss_pred ccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceee
Q psy17243 152 SEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 152 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 231 (392)
...+.++ +++++++++++.|+.|++||+++++++..+.+|...|.+++|+ +++.++++|+.||.|++||+++++++.
T Consensus 270 ~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 270 MASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD-HERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp SSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-TTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 7777776 6789999999999999999999999999999999999999999 678899999999999999999999999
Q ss_pred eecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEee
Q psy17243 232 FLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSA 311 (392)
Q Consensus 232 ~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 311 (392)
.+.+|...|.++.|+ +.+++++..++. ...|....+.. ....
T Consensus 347 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~-------------------v~vwd~~~~~~-----------------~~~~ 388 (464)
T 3v7d_B 347 TLQGHTALVGLLRLS--DKFLVSAAADGS-------------------IRGWDANDYSR-----------------KFSY 388 (464)
T ss_dssp EECCCSSCEEEEEEC--SSEEEEEETTSE-------------------EEEEETTTCCE-----------------EEEE
T ss_pred EEeCCCCcEEEEEEc--CCEEEEEeCCCc-------------------EEEEECCCCce-----------------eeee
Confidence 999999999999997 456666543221 11122111100 0000
Q ss_pred ccccceecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCCCccccccccccccCccccccccCccCCCCcccccC
Q psy17243 312 SMEEISKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTDELSSPVDEFG 391 (392)
Q Consensus 312 s~d~~~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~~~d~~ 391 (392)
. ........+|+|++++++ ++.|+.|++||+.+++. .........-.-.+++.+++.|+++..+.|
T Consensus 389 ~--------~~~~~~~~~~~~~~~~l~--~~~dg~i~iwd~~~g~~----~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g 454 (464)
T 3v7d_B 389 H--------HTNLSAITTFYVSDNILV--SGSENQFNIYNLRSGKL----VHANILKDADQIWSVNFKGKTLVAAVEKDG 454 (464)
T ss_dssp E--------CTTCCCEEEEEECSSEEE--EEETTEEEEEETTTCCE----EESCTTTTCSEEEEEEEETTEEEEEEEETT
T ss_pred c--------CCCCccEEEEEeCCCEEE--EecCCeEEEEECCCCcE----EehhhccCCCcEEEEEecCCEEEEEEEeCC
Confidence 0 000111125788888765 99999999999988655 333333332323788899999999888765
No 90
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-35 Score=258.44 Aligned_cols=252 Identities=10% Similarity=0.067 Sum_probs=218.8
Q ss_pred CCccCCeEEEEECCCcc---ceeeeccCCcCeeEEEecCCCC-eEEEEeCCCeEEEEeC-CCCceeEEecc--cccceEE
Q psy17243 1 MGGMDCLVNVWQMNSHE---LQSTMEGHLNTVSCVAISPNSI-FAVSGSEDNTAKVWGL-TLGSVVSTFKS--HQSTILA 73 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~v~iwd~-~~~~~~~~~~~--~~~~v~~ 73 (392)
+|+.||.|++|++.+++ ....+.+|...|.+++|+|+++ +|++++.||.|++||+ ++++. ..+.. |...|.+
T Consensus 28 ~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~ 106 (342)
T 1yfq_A 28 ITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICR 106 (342)
T ss_dssp EEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEE
T ss_pred EEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEE
Confidence 46789999999998877 3455568999999999999999 9999999999999999 77655 77788 9999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCC---------ceeeee--cccceeEEEEeCCCCEEEEecCCCcEEEEeCCC-CCC
Q psy17243 74 VAVLSDSRRVVTSDKAGVIAVWVADN---------AQLLYS--ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSP-QTH 141 (392)
Q Consensus 74 ~~~~~~~~~l~~~~~d~~i~iwd~~~---------~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~ 141 (392)
++|+| ++.|++++.|+.|++||+.+ ++.+.. +...+.++++++++ +++++.++.|++||++. ..
T Consensus 107 l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~- 182 (342)
T 1yfq_A 107 ICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCED- 182 (342)
T ss_dssp EEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTT-
T ss_pred EEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCcccc-
Confidence 99999 99999999999999999987 655433 45678899999887 99999999999999985 32
Q ss_pred CCcceeeeccccceEEEEEEc-CCCEEEEeeCCCcEEEEEcCCC------eEEEEEecCCC---------ceeEEEEecC
Q psy17243 142 KDDERFTVSHSEEITCFTVTW-DSQYLITGSRDMSLKVWQVVGG------KLAQVLVGHTD---------HVSCVAVAVT 205 (392)
Q Consensus 142 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~---------~v~~~~~~~~ 205 (392)
.........+...+.+++|+| +++++++++.||.|++|+++.. +....+..|.. .|.+++|+ +
T Consensus 183 ~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~ 261 (342)
T 1yfq_A 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS-P 261 (342)
T ss_dssp CCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEEC-T
T ss_pred ccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEc-C
Confidence 223334446788999999999 9999999999999999999887 77788888865 99999999 6
Q ss_pred CCcEEEEecCCCeEEEEECCCCceeeeeccc-ccceeEEEEcCCCeEEEEcCCCCC
Q psy17243 206 NKSLVVSGSKDSNLIVWDMETGGEEHFLAGH-LGCVTCVKLAGDGTVAMSDLPPSR 260 (392)
Q Consensus 206 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~dg~~~~~~~~~~~ 260 (392)
++.+|++++.||.|++||+.+++.+..+.+| ...|.+++ |++++++++..++.
T Consensus 262 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 262 RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred CCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 7888999999999999999999999999998 99999999 99999999875543
No 91
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8.1e-36 Score=268.70 Aligned_cols=223 Identities=25% Similarity=0.481 Sum_probs=197.2
Q ss_pred ccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCcee
Q psy17243 23 EGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQL 102 (392)
Q Consensus 23 ~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 102 (392)
.+|...|.++.+ ++++|++|+.||.|++||+.+++.+..+.+|...|.+++| ++++|++++.||.|++||+.+++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 356778998887 7889999999999999999999999999999999999999 788999999999999999999988
Q ss_pred eeecc---cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEE
Q psy17243 103 LYSAL---GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVW 179 (392)
Q Consensus 103 ~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 179 (392)
+..+. ..+.++.++ +..+++++.||.|++||+.............+|...|.+++| ++++|++++.||.|++|
T Consensus 206 ~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVW 281 (435)
T ss_dssp EEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred EEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEE
Confidence 76554 467777775 569999999999999999865544444556688999999998 68899999999999999
Q ss_pred EcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCCC
Q psy17243 180 QVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 180 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
|+++++.+..+.+|...|.++.++ +.++++|+.||.|++||+++++++..+.+|...|.+++| ++.+++++..+
T Consensus 282 d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 282 NTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred ECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCC
Confidence 999999999999999999999986 579999999999999999999999999999999999998 67777776544
No 92
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=260.40 Aligned_cols=256 Identities=14% Similarity=0.197 Sum_probs=217.3
Q ss_pred CCccCCeEEEEECCC-ccce-eeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEE--
Q psy17243 1 MGGMDCLVNVWQMNS-HELQ-STMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAV-- 76 (392)
Q Consensus 1 tg~~dg~i~vwd~~~-~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~-- 76 (392)
+|+.||.|++||+.+ ++.+ ..+.+|...|.+++|+|++++|++++.||.|++||+++++.+. +..|...|.+++|
T Consensus 59 ~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~ 137 (368)
T 3mmy_A 59 AGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIK 137 (368)
T ss_dssp EEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEE
T ss_pred EECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEe
Confidence 478899999999987 5544 7788899999999999999999999999999999999998776 4559999999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCceeeeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceE
Q psy17243 77 LSDSRRVVTSDKAGVIAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEIT 156 (392)
Q Consensus 77 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~ 156 (392)
+|++++|++++.|+.|++||+++++.+..+..+....++......+++++.++.+.+|+++..... .......+...+.
T Consensus 138 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~ 216 (368)
T 3mmy_A 138 APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSE-FRRIESPLKHQHR 216 (368)
T ss_dssp CSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEE-EEECCCSCSSCEE
T ss_pred CCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccch-hhhccccccCCCc
Confidence 889999999999999999999999888777666666666666778999999999999999743221 1112223455667
Q ss_pred EEEEEcCCCE----EEEeeCCCcEEEEEcCCC---eEEEEEecCCC------------ceeEEEEecCCCcEEEEecCCC
Q psy17243 157 CFTVTWDSQY----LITGSRDMSLKVWQVVGG---KLAQVLVGHTD------------HVSCVAVAVTNKSLVVSGSKDS 217 (392)
Q Consensus 157 ~~~~~~~~~~----l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~dg 217 (392)
++++.++... +++++.||.|++||++.. +.+..+..|.. .|++++|+ +++.+|++++.||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~~~~l~s~~~dg 295 (368)
T 3mmy_A 217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFH-PVHGTLATVGSDG 295 (368)
T ss_dssp EEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEEC-TTTCCEEEEETTS
T ss_pred eEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEe-cCCCEEEEEccCC
Confidence 7777766554 999999999999999887 56677777766 79999999 6778999999999
Q ss_pred eEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCCCC
Q psy17243 218 NLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPS 259 (392)
Q Consensus 218 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~ 259 (392)
.|++||+.+++++..+..|...|.+++|+|+|++++++..+.
T Consensus 296 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 296 RFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp CEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred eEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 999999999999999999999999999999999999987543
No 93
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.1e-35 Score=252.04 Aligned_cols=225 Identities=15% Similarity=0.226 Sum_probs=189.1
Q ss_pred CCccCCeEEEEECCC--ccceeeeccCCcCeeEEEecCC--CCeEEEEeCCCeEEEEeCCCCc--eeEEecccccceEEE
Q psy17243 1 MGGMDCLVNVWQMNS--HELQSTMEGHLNTVSCVAISPN--SIFAVSGSEDNTAKVWGLTLGS--VVSTFKSHQSTILAV 74 (392)
Q Consensus 1 tg~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~ 74 (392)
||+.|++|+|||+.+ .+.+..+.+|.++|.+++|+|+ +++|++|+.|++|++||+++++ .+..+..|...|.++
T Consensus 26 s~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v 105 (297)
T 2pm7_B 26 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSV 105 (297)
T ss_dssp EEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEE
T ss_pred EEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEE
Confidence 578999999999974 4778899999999999999863 8899999999999999999874 566778899999999
Q ss_pred EEecC--CCEEEEEeCCCeEEEEEcCCce-----eeeecccceeEEEEeCC-------------CCEEEEecCCCcEEEE
Q psy17243 75 AVLSD--SRRVVTSDKAGVIAVWVADNAQ-----LLYSALGPSKCLTVTHN-------------MKYIVSGDGDNSLRIW 134 (392)
Q Consensus 75 ~~~~~--~~~l~~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~-------------~~~l~~~~~d~~i~~~ 134 (392)
+|+|+ +++|++++.|+.|++||++++. .+..+...+.+++|+|+ +++|++++.|+.|++|
T Consensus 106 ~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lw 185 (297)
T 2pm7_B 106 QWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 185 (297)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEE
T ss_pred EeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEE
Confidence 99997 8899999999999999998753 23345567899999996 5799999999999999
Q ss_pred eCCCCCCCC-cceeeeccccceEEEEEEcCC---CEEEEeeCCCcEEEEEcCCCe---EEEEE--ecCCCceeEEEEecC
Q psy17243 135 PTSPQTHKD-DERFTVSHSEEITCFTVTWDS---QYLITGSRDMSLKVWQVVGGK---LAQVL--VGHTDHVSCVAVAVT 205 (392)
Q Consensus 135 d~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~---~~~~~--~~~~~~v~~~~~~~~ 205 (392)
|++...... ......+|...|.+++|+|++ ++|++++.|++|++||+++.. ....+ ..|...|.+++|+ +
T Consensus 186 d~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~ 264 (297)
T 2pm7_B 186 KYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWS-L 264 (297)
T ss_dssp EEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEEC-S
T ss_pred EEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEEC-C
Confidence 997543221 223445799999999999984 899999999999999998743 12233 4678899999999 6
Q ss_pred CCcEEEEecCCCeEEEEECCC
Q psy17243 206 NKSLVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 206 ~~~~l~~~~~dg~i~iwd~~~ 226 (392)
++.+|++++.|+.|++|+...
T Consensus 265 ~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 265 SGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SSCCEEEEETTSCEEEEEECT
T ss_pred CCCEEEEEcCCCcEEEEEECC
Confidence 788999999999999999763
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=266.42 Aligned_cols=252 Identities=14% Similarity=0.193 Sum_probs=205.9
Q ss_pred CCccCCeEEEEECCCcc-----------ceeeeccCC------------cCeeEEEecCCC--CeEEEEeCCCeEEEEeC
Q psy17243 1 MGGMDCLVNVWQMNSHE-----------LQSTMEGHL------------NTVSCVAISPNS--IFAVSGSEDNTAKVWGL 55 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~-----------~~~~~~~h~------------~~v~~~~~~~~~--~~l~~~~~dg~v~iwd~ 55 (392)
+|+.||.|+|||+.+++ ....+.+|. ..|++++|+|++ .+|++++.|+.|++||+
T Consensus 45 ~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~ 124 (447)
T 3dw8_B 45 TGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKI 124 (447)
T ss_dssp EEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEE
T ss_pred EEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEec
Confidence 47889999999998877 577889998 889999999998 78999999999999998
Q ss_pred CCCcee---------------------------------------EE-ecccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy17243 56 TLGSVV---------------------------------------ST-FKSHQSTILAVAVLSDSRRVVTSDKAGVIAVW 95 (392)
Q Consensus 56 ~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 95 (392)
.+++.. .. ..+|...|.+++|+|++++|+++ .|+.|++|
T Consensus 125 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iw 203 (447)
T 3dw8_B 125 SERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLW 203 (447)
T ss_dssp EEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEE
T ss_pred ccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEE
Confidence 764432 12 35799999999999999999998 89999999
Q ss_pred EcCCc-eeee----------ecccceeEEEEeCCC-CEEEEecCCCcEEEEeCCCCCCCC-cceeeecccc---------
Q psy17243 96 VADNA-QLLY----------SALGPSKCLTVTHNM-KYIVSGDGDNSLRIWPTSPQTHKD-DERFTVSHSE--------- 153 (392)
Q Consensus 96 d~~~~-~~~~----------~~~~~~~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~-~~~~~~~~~~--------- 153 (392)
|+++. +.+. .+...+.+++|+|++ ++|++++.||.|++||++...... .......|..
T Consensus 204 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (447)
T 3dw8_B 204 HLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSE 283 (447)
T ss_dssp ETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHH
T ss_pred ECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccc
Confidence 99943 3333 345578999999998 999999999999999998655321 1334444544
Q ss_pred ---ceEEEEEEcCCCEEEEeeCCCcEEEEEcCC-CeEEEEEecCCCc---------------eeEEEEecCCCcEEEEec
Q psy17243 154 ---EITCFTVTWDSQYLITGSRDMSLKVWQVVG-GKLAQVLVGHTDH---------------VSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 154 ---~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~---------------v~~~~~~~~~~~~l~~~~ 214 (392)
.|.+++|+|++++|++++. +.|++||+++ ++++..+.+|... +..++|+ +++.+|++++
T Consensus 284 ~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s-~~~~~l~s~s 361 (447)
T 3dw8_B 284 IISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWN-GSDSVVMTGS 361 (447)
T ss_dssp HTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEEC-TTSSEEEEEC
T ss_pred cCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEEC-CCCCEEEEec
Confidence 8999999999999999998 9999999997 8888888888642 2348999 6788899999
Q ss_pred CCCeEEEEECCCCceeeeec---------------------------------ccccceeEEEEcCCCeEEEEcC
Q psy17243 215 KDSNLIVWDMETGGEEHFLA---------------------------------GHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 215 ~dg~i~iwd~~~~~~~~~~~---------------------------------~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.||.|++||+.+++.+. +. .+...|..++|+|++.+++.+.
T Consensus 362 ~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~ 435 (447)
T 3dw8_B 362 YNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVAT 435 (447)
T ss_dssp STTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEEC
T ss_pred cCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEe
Confidence 99999999999887653 22 2345688999999999999875
No 95
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.6e-36 Score=259.09 Aligned_cols=224 Identities=16% Similarity=0.211 Sum_probs=187.5
Q ss_pred CCccCCeEEEEECCCcc--ceeeeccCCcCeeEEEecC--CCCeEEEEeCCCeEEEEeCCCC--ceeEEecccccceEEE
Q psy17243 1 MGGMDCLVNVWQMNSHE--LQSTMEGHLNTVSCVAISP--NSIFAVSGSEDNTAKVWGLTLG--SVVSTFKSHQSTILAV 74 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~ 74 (392)
||+.|++|+|||+.+++ .+..+.+|...|.+++|+| ++++|++|+.|++|++||++++ +....+.+|...|.++
T Consensus 30 sgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v 109 (316)
T 3bg1_A 30 TCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSV 109 (316)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEE
T ss_pred EEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEE
Confidence 57899999999998764 4678899999999999986 4889999999999999999987 4567788899999999
Q ss_pred EEecC--CCEEEEEeCCCeEEEEEcCCcee---e---eecccceeEEEEeCC-----------------CCEEEEecCCC
Q psy17243 75 AVLSD--SRRVVTSDKAGVIAVWVADNAQL---L---YSALGPSKCLTVTHN-----------------MKYIVSGDGDN 129 (392)
Q Consensus 75 ~~~~~--~~~l~~~~~d~~i~iwd~~~~~~---~---~~~~~~~~~~~~~~~-----------------~~~l~~~~~d~ 129 (392)
+|+|+ +.+|++++.|+.|++||+..+.. . ..+...+.++.|+|+ +++|++++.|+
T Consensus 110 ~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~ 189 (316)
T 3bg1_A 110 CWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN 189 (316)
T ss_dssp EECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS
T ss_pred EECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCC
Confidence 99998 78999999999999999987632 1 223446788999887 46899999999
Q ss_pred cEEEEeCCCCCCCCcceeeeccccceEEEEEEcCC----CEEEEeeCCCcEEEEEcCCC---e-EEEEEecCCCceeEEE
Q psy17243 130 SLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDS----QYLITGSRDMSLKVWQVVGG---K-LAQVLVGHTDHVSCVA 201 (392)
Q Consensus 130 ~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~---~-~~~~~~~~~~~v~~~~ 201 (392)
.|++||++............+|...|.+++|+|++ ++|++++.|++|++||+.+. + ....+..|...|.+++
T Consensus 190 ~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~ 269 (316)
T 3bg1_A 190 LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVS 269 (316)
T ss_dssp BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEE
T ss_pred eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEE
Confidence 99999996432222333445789999999999986 89999999999999999762 1 2334567899999999
Q ss_pred EecCCCcEEEEecCCCeEEEEECC
Q psy17243 202 VAVTNKSLVVSGSKDSNLIVWDME 225 (392)
Q Consensus 202 ~~~~~~~~l~~~~~dg~i~iwd~~ 225 (392)
|+ +++.+|++++.|+.|++|+..
T Consensus 270 ~s-p~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 270 WS-ITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EC-TTTCCEEEEESSSCEEEEEEC
T ss_pred Ec-CCCCEEEEEcCCCeEEEEEEC
Confidence 99 678899999999999999976
No 96
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.2e-34 Score=251.38 Aligned_cols=295 Identities=16% Similarity=0.163 Sum_probs=201.5
Q ss_pred eeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCC----ceeEEecccccceEEEEEec--CCCEEEEEeCCCeE
Q psy17243 19 QSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLG----SVVSTFKSHQSTILAVAVLS--DSRRVVTSDKAGVI 92 (392)
Q Consensus 19 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i 92 (392)
...+.+|.+.|++++|+|++++|++++.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 3456789999999999999999999999999999999876 46677888999999999999 69999999999999
Q ss_pred EEEEcCCc---------eeee---ecccceeEEEEeCC--CCEEEEecCCCcEEEEeCCCCCCCCccee----------e
Q psy17243 93 AVWVADNA---------QLLY---SALGPSKCLTVTHN--MKYIVSGDGDNSLRIWPTSPQTHKDDERF----------T 148 (392)
Q Consensus 93 ~iwd~~~~---------~~~~---~~~~~~~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~----------~ 148 (392)
++||+.++ +.+. .+...+.+++|+|+ ++++++++.|+.|++||++.......... .
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 99999876 2233 34567899999999 99999999999999999986654433321 1
Q ss_pred eccccceEEEEEEcC---CCEEEEeeCCCcEEEEEcCCCeE--EEEEecCCCceeEEEEecCCC---cEEEEecCCCeEE
Q psy17243 149 VSHSEEITCFTVTWD---SQYLITGSRDMSLKVWQVVGGKL--AQVLVGHTDHVSCVAVAVTNK---SLVVSGSKDSNLI 220 (392)
Q Consensus 149 ~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~---~~l~~~~~dg~i~ 220 (392)
..+...+.+++|+|+ +.++++++.++.+.+|+...++. +..+.+|...|++++|+|.++ .+|++++.||.|+
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 257788999999997 89999999999998888877764 677788999999999995432 7999999999999
Q ss_pred EEECCCCceeeeecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecc
Q psy17243 221 VWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVD 300 (392)
Q Consensus 221 iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (392)
+||++++........+...+.....+++......+......... ..+... ..........+|...+..+..
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~h~~~v~~~~~-- 314 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK----AELQSN---LQVELLSEHDDHNGEVWSVSW-- 314 (351)
T ss_dssp EEEEEECC-------------------------------------------CCS---EEEEEEEEECTTSSCEEEEEE--
T ss_pred EEeCCCCcCccccCCcccceeccCCCccccccccccccccccee----eeeccc---ccccEEEEEecccccEEEEEE--
Confidence 99998775544443333344444444444443333221111100 000000 000011112244443333332
Q ss_pred cccceeEEEeeccccceecceec
Q psy17243 301 ERLKRRFSVSASMEEISKIPIKD 323 (392)
Q Consensus 301 ~~~~~~~~~s~s~d~~~~~~~~~ 323 (392)
.+++.++++++.|+.+++|...
T Consensus 315 -s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 315 -NLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp -CSSSCCEEEEETTSCEEEEEEC
T ss_pred -cCCCCEEEEecCCCcEEEEecC
Confidence 3456678888888888888754
No 97
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9.1e-35 Score=250.77 Aligned_cols=278 Identities=16% Similarity=0.239 Sum_probs=212.3
Q ss_pred eeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec--ccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeec
Q psy17243 29 VSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK--SHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSA 106 (392)
Q Consensus 29 v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 106 (392)
.++|+||+++ +|++| .|++|+|||++++++++.+. .|...|.+++|+|++++|++|+.|+.|++||+++++.+...
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5789999986 67666 59999999999999887765 57788999999999999999999999999999999988776
Q ss_pred ccc-eeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCe
Q psy17243 107 LGP-SKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGK 185 (392)
Q Consensus 107 ~~~-~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 185 (392)
.++ ....++++++..+++++.++.+++|+.... .........|...+..+.+.+++++|++++.|+.|++||+++++
T Consensus 106 ~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 106 TSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred cCccceEEEeecCCCEEEEEecCCceEeeecCCC--ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 553 334566777889999999999999998643 23334456789999999999999999999999999999998764
Q ss_pred ----EEEEEecCCCceeEEEEecCCCcEE--EEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcC--C
Q psy17243 186 ----LAQVLVGHTDHVSCVAVAVTNKSLV--VSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDL--P 257 (392)
Q Consensus 186 ----~~~~~~~~~~~v~~~~~~~~~~~~l--~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~--~ 257 (392)
.......+...|.+++++|.+..++ ++++.++.|++||........... +...+..+.|++++..++.+. .
T Consensus 184 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~ 262 (318)
T 4ggc_A 184 GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFA 262 (318)
T ss_dssp TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTT
T ss_pred ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcC
Confidence 3455667888999999997776665 466789999999999887765544 677899999999988777642 1
Q ss_pred CCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecceeccCCCCCCChhhhhh
Q psy17243 258 PSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQGLGPEQAAL 337 (392)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~~~s~dg~~l 337 (392)
++. ...|....+..... +.+ +...+...+|+|||++|
T Consensus 263 d~~-------------------i~iwd~~~~~~~~~---------------l~g---------H~~~V~~l~~spdg~~l 299 (318)
T 4ggc_A 263 QNQ-------------------LVIWKYPTMAKVAE---------------LKG---------HTSRVLSLTMSPDGATV 299 (318)
T ss_dssp TCC-------------------EEEEETTTCCEEEE---------------ECC---------CSSCEEEEEECTTSSCE
T ss_pred CCE-------------------EEEEECCCCcEEEE---------------EcC---------CCCCEEEEEEcCCCCEE
Confidence 111 11222211110000 000 00011112689999999
Q ss_pred hcccChHHHHHHhhCCCC
Q psy17243 338 AQSQHFDQLEALWNKKSP 355 (392)
Q Consensus 338 a~s~~~d~~i~~Wd~~~~ 355 (392)
| |++.|++|+|||+.+.
T Consensus 300 ~-S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 300 A-SAAADETLRLWRCFEL 316 (318)
T ss_dssp E-EEETTTEEEEECCSCC
T ss_pred E-EEecCCeEEEEECCCC
Confidence 8 9999999999998754
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.9e-36 Score=266.59 Aligned_cols=222 Identities=13% Similarity=0.068 Sum_probs=183.6
Q ss_pred CCccCCeEEEEECCCc--cceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc---eeEEecccccceEEEE
Q psy17243 1 MGGMDCLVNVWQMNSH--ELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS---VVSTFKSHQSTILAVA 75 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~ 75 (392)
+|+.||.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++ ....+..|...|.+++
T Consensus 28 ~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 107 (377)
T 3dwl_C 28 TTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVR 107 (377)
T ss_dssp CCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEE
T ss_pred EecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEE
Confidence 5789999999999988 7888999999999999999999999999999999999999887 6777888999999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEcCCcee---e---ee-cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCC-------
Q psy17243 76 VLSDSRRVVTSDKAGVIAVWVADNAQL---L---YS-ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTH------- 141 (392)
Q Consensus 76 ~~~~~~~l~~~~~d~~i~iwd~~~~~~---~---~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~------- 141 (392)
|+|++++|++++.|+.|++||+++++. . .. +...+.+++|+|++++|++++.|+.|++||+.....
T Consensus 108 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 187 (377)
T 3dwl_C 108 WSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEAS 187 (377)
T ss_dssp CCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSC
T ss_pred ECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcccc
Confidence 999999999999999999999988752 2 23 566889999999999999999999999999863221
Q ss_pred --------CCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeE----EEEEecCCCceeEEEEecCCCcE
Q psy17243 142 --------KDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKL----AQVLVGHTDHVSCVAVAVTNKSL 209 (392)
Q Consensus 142 --------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~ 209 (392)
....... .|...|.+++|+|++++|++++.|+.|++||+++++. +..+.+|...|.+++|+ +++.+
T Consensus 188 ~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~ 265 (377)
T 3dwl_C 188 VWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWA-NESAI 265 (377)
T ss_dssp SSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEE-ETTEE
T ss_pred ccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEc-CCCCE
Confidence 1111122 7889999999999999999999999999999999877 77888999999999999 67888
Q ss_pred EEEecCCCeEEEEECC
Q psy17243 210 VVSGSKDSNLIVWDME 225 (392)
Q Consensus 210 l~~~~~dg~i~iwd~~ 225 (392)
|++++.++.+ +|+..
T Consensus 266 l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 266 VAAGYNYSPI-LLQGN 280 (377)
T ss_dssp EEEESSSSEE-EECCC
T ss_pred EEEEcCCcEE-EEEeC
Confidence 9988866666 66654
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.9e-34 Score=259.74 Aligned_cols=242 Identities=26% Similarity=0.494 Sum_probs=213.7
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+|+.||.|++||+.+++....+.+|...|.+++| ++++|++|+.||.|++||+++++.+..+..|...|.+++|+ +
T Consensus 148 ~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~ 223 (435)
T 1p22_A 148 SGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--N 223 (435)
T ss_dssp EEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--T
T ss_pred EEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--C
Confidence 4789999999999999999999999999999999 77899999999999999999999999999999999999996 4
Q ss_pred CEEEEEeCCCeEEEEEcCCceee------eecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccc
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLL------YSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEE 154 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 154 (392)
..+++++.||.|++||+.+++.. ..+...+.++.+ +++++++++.||.|++||+++. ........|...
T Consensus 224 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~~~ 298 (435)
T 1p22_A 224 GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC---EFVRTLNGHKRG 298 (435)
T ss_dssp TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC---CEEEEEECCSSC
T ss_pred CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC---cEEEEEcCCCCc
Confidence 59999999999999999887543 234456777777 7889999999999999999854 334445578899
Q ss_pred eEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCc------
Q psy17243 155 ITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGG------ 228 (392)
Q Consensus 155 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------ 228 (392)
|.++.++ ++++++|+.||.|++||+++++++..+.+|...|.+++| ++.+|++|+.||.|++||+.+++
T Consensus 299 v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 373 (435)
T 1p22_A 299 IACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPA 373 (435)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSCT
T ss_pred EEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCccccc
Confidence 9999884 789999999999999999999999999999999999998 47889999999999999998766
Q ss_pred ---eeeeecccccceeEEEEcCCCeEEEEcCCC
Q psy17243 229 ---EEHFLAGHLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 229 ---~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
.+..+.+|...|.+++| ++..++++..+
T Consensus 374 ~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~D 404 (435)
T 1p22_A 374 GTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHD 404 (435)
T ss_dssp TTTEEEEECCCSSCCCCEEE--CSSCEEECCSS
T ss_pred cchheeeccCCCCCeEEEEe--CCCEEEEEeCC
Confidence 78889999999999999 66777776644
No 100
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-35 Score=263.48 Aligned_cols=295 Identities=13% Similarity=0.195 Sum_probs=222.0
Q ss_pred CCccCCeEEEEECCC---cc---ceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCC---CCceeEEecc-----
Q psy17243 1 MGGMDCLVNVWQMNS---HE---LQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLT---LGSVVSTFKS----- 66 (392)
Q Consensus 1 tg~~dg~i~vwd~~~---~~---~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~~~~~~~~~----- 66 (392)
+|+.||.|++||+.+ +. ....+ .|...|.+++|+|++++|++++.||.|++||++ +++....+..
T Consensus 81 s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~ 159 (437)
T 3gre_A 81 TGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRK 159 (437)
T ss_dssp EEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEE
Confidence 578999999999976 33 22233 499999999999999999999999999999995 5655544432
Q ss_pred -------cccceEEEE--EecCCCEEEEEeCCCeEEEEEcCCceeeeec-----ccceeEEEEeCCCCEEEEecCCCcEE
Q psy17243 67 -------HQSTILAVA--VLSDSRRVVTSDKAGVIAVWVADNAQLLYSA-----LGPSKCLTVTHNMKYIVSGDGDNSLR 132 (392)
Q Consensus 67 -------~~~~v~~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~i~ 132 (392)
+...+.++. +++++++|++++.|+.|++||+++++.+..+ ...+.+++|+|++++|++++.||.|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~ 239 (437)
T 3gre_A 160 INLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIID 239 (437)
T ss_dssp EEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred EEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 344566666 4578999999999999999999998876544 45789999999999999999999999
Q ss_pred EEeCCCCCCCCccee-eeccccceEEEEEEc----CCCEEEEeeCCCcEEEEEcCCCeEEEEEecC--------------
Q psy17243 133 IWPTSPQTHKDDERF-TVSHSEEITCFTVTW----DSQYLITGSRDMSLKVWQVVGGKLAQVLVGH-------------- 193 (392)
Q Consensus 133 ~~d~~~~~~~~~~~~-~~~~~~~v~~~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------- 193 (392)
+||++.. ..... ...|...|.+++|+| ++.+|++++.||.|++||+++++++..+.+|
T Consensus 240 iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T 3gre_A 240 IWDIRFN---VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEK 316 (437)
T ss_dssp EEETTTT---EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCS
T ss_pred EEEcCCc---cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccc
Confidence 9999843 22222 236778999996664 5779999999999999999999988887644
Q ss_pred ------------CCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccc---cceeEEEEcCCCeEEEEcCCC
Q psy17243 194 ------------TDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHL---GCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 194 ------------~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~v~~~~~~~dg~~~~~~~~~ 258 (392)
...|++++|+ ++.+|++++.|+.|++||+.+++....+.+|. ..+....++++..+++...+.
T Consensus 317 ~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (437)
T 3gre_A 317 GLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKR 394 (437)
T ss_dssp SGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-
T ss_pred ccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEeccc
Confidence 4557888888 45899999999999999999999998888764 356677788888777765211
Q ss_pred CCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecce
Q psy17243 259 SRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPI 321 (392)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~ 321 (392)
... ... .....|...+..+..... .++.++++++.|+.+++|.
T Consensus 395 ~~~----~~~---------------~~~~~h~~~I~~i~~~~~-~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 395 TST----HSV---------------DDSLYHHDIINSISTCEV-DETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -------------------------------CCCEEEEEEEES-SSSEEEEEEETTSCEEEEC
T ss_pred ccc----ccc---------------CcccccccceeeEeeecc-CCceEEEEEcCCceEEEeC
Confidence 000 000 111134444444333322 2366899999999999994
No 101
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.9e-35 Score=255.89 Aligned_cols=299 Identities=16% Similarity=0.230 Sum_probs=218.9
Q ss_pred EEEEECCCccceeeeccCCcCeeEEEecCC---CCeEEEEeCCCeEEEEeCCC-Ccee-EEecccccceEEEEEecCCCE
Q psy17243 8 VNVWQMNSHELQSTMEGHLNTVSCVAISPN---SIFAVSGSEDNTAKVWGLTL-GSVV-STFKSHQSTILAVAVLSDSRR 82 (392)
Q Consensus 8 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~~~~~dg~v~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~ 82 (392)
...|+....+.+..+.+|.+.|++++|+|+ +++|++|+.||.|++||+++ +..+ ..+..|...|.+++|+|++++
T Consensus 21 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 100 (368)
T 3mmy_A 21 ATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSK 100 (368)
T ss_dssp --CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred eccCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCE
Confidence 334555667788888999999999999998 59999999999999999997 5554 788889999999999999999
Q ss_pred EEEEeCCCeEEEEEcCCceeee--ecccceeEEEE--eCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEE
Q psy17243 83 VVTSDKAGVIAVWVADNAQLLY--SALGPSKCLTV--THNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCF 158 (392)
Q Consensus 83 l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~--~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~ 158 (392)
|++++.||.|++||+.+++.+. .+..++.+++| ++++++|++++.|+.|++||++..... ... .....+.++
T Consensus 101 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~-~~~~~~~~~ 176 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM---MVL-QLPERCYCA 176 (368)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS---EEE-ECSSCEEEE
T ss_pred EEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE---EEE-ecCCCceEE
Confidence 9999999999999999987654 45568899999 899999999999999999999854332 222 233456666
Q ss_pred EEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe--cCCCceeEEEEecCC---CcEEEEecCCCeEEEEECCCC---cee
Q psy17243 159 TVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV--GHTDHVSCVAVAVTN---KSLVVSGSKDSNLIVWDMETG---GEE 230 (392)
Q Consensus 159 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~---~~~ 230 (392)
.+. ...+++++.++.+.+|+++......... .+...+.++.+.+.. ...+++++.||.|++||++.. +.+
T Consensus 177 ~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~ 254 (368)
T 3mmy_A 177 DVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254 (368)
T ss_dssp EEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHS
T ss_pred Eec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccc
Confidence 665 4588889999999999998765443322 234455666665322 233899999999999999877 344
Q ss_pred eeecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEe
Q psy17243 231 HFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVS 310 (392)
Q Consensus 231 ~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 310 (392)
..+..|....... . ..+|.
T Consensus 255 ~~~~~~~~~~~~~----------~-------------------------------~~~~~-------------------- 273 (368)
T 3mmy_A 255 FTFKCHRSNGTNT----------S-------------------------------APQDI-------------------- 273 (368)
T ss_dssp EEEECSEEC--------------C-------------------------------CCEEE--------------------
T ss_pred eeeeeeecccccc----------c-------------------------------ccccc--------------------
Confidence 5555554310000 0 00000
Q ss_pred eccccceecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCCCccccccccccccCccccccccCccCCCCcccc
Q psy17243 311 ASMEEISKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTDELSSPVDE 389 (392)
Q Consensus 311 ~s~d~~~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~~~d 389 (392)
......+|+|++++|+ +++.||.|++||+.++.....+ ..+...+..++|+|||++||+++.|
T Consensus 274 ------------~~v~~~~~sp~~~~l~-s~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 274 ------------YAVNGIAFHPVHGTLA-TVGSDGRFSFWDKDARTKLKTS---EQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp ------------CCEEEEEECTTTCCEE-EEETTSCEEEEETTTTEEEEEC---CCCSSCEEEEEECTTSSCEEEEECC
T ss_pred ------------cceEEEEEecCCCEEE-EEccCCeEEEEECCCCcEEEEe---cCCCCCceEEEECCCCCeEEEEecc
Confidence 0000113677887777 7888999999999876653221 1234567779999999999987765
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.5e-34 Score=257.71 Aligned_cols=272 Identities=13% Similarity=0.137 Sum_probs=210.2
Q ss_pred CeeEEEecCCCCe-EEEEeCCCeEEEEeCCCC----ceeEEecccccceEEEEEec-CCCEEEEEeCCCeEEEEEcCCce
Q psy17243 28 TVSCVAISPNSIF-AVSGSEDNTAKVWGLTLG----SVVSTFKSHQSTILAVAVLS-DSRRVVTSDKAGVIAVWVADNAQ 101 (392)
Q Consensus 28 ~v~~~~~~~~~~~-l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~ 101 (392)
....++++|+... +++++.||.|+||++... ..+..+.+|...|.+++|+| ++++|++++.||.|++||+.++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 4456888887654 445788999999999664 23456778999999999999 89999999999999999998872
Q ss_pred -------e---eeecccceeEEEEeCCC-CEEEEecCCCcEEEEeCCCCCCCCcceee--eccccceEEEEEEcCCCEEE
Q psy17243 102 -------L---LYSALGPSKCLTVTHNM-KYIVSGDGDNSLRIWPTSPQTHKDDERFT--VSHSEEITCFTVTWDSQYLI 168 (392)
Q Consensus 102 -------~---~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~ 168 (392)
. +..+...+.+++|+|++ ++|++++.|+.|++||+++. ...... ..|...|.+++|+|++++|+
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG---AAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT---EEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC---CccEEEecCCCCCceEEEEECCCCCEEE
Confidence 2 23455688999999998 69999999999999999843 223333 46889999999999999999
Q ss_pred EeeCCCcEEEEEcCCCeEEEEE-ecCCCc-eeEEEEecCCCcEEEEe---cCCCeEEEEECCCCce-eeeec-cccccee
Q psy17243 169 TGSRDMSLKVWQVVGGKLAQVL-VGHTDH-VSCVAVAVTNKSLVVSG---SKDSNLIVWDMETGGE-EHFLA-GHLGCVT 241 (392)
Q Consensus 169 ~~~~dg~i~i~d~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~~-~~~~~v~ 241 (392)
+++.|+.|++||+++++.+..+ ..|... +.++.|+ +++.+|++| +.|+.|++||+++++. +.... .|...+.
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 271 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV-SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVL 271 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC-STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCE
T ss_pred EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc-CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCcee
Confidence 9999999999999999999888 688776 8999999 678899998 7999999999987654 22221 2334444
Q ss_pred EEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecce
Q psy17243 242 CVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPI 321 (392)
Q Consensus 242 ~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~ 321 (392)
+++|+
T Consensus 272 ~~~~s--------------------------------------------------------------------------- 276 (402)
T 2aq5_A 272 LPFFD--------------------------------------------------------------------------- 276 (402)
T ss_dssp EEEEE---------------------------------------------------------------------------
T ss_pred EEEEc---------------------------------------------------------------------------
Confidence 44444
Q ss_pred eccCCCCCCChhhhhhhcccChHHHHHHhhCCCCCCccccccccccccCccccccccCccCCCCccc
Q psy17243 322 KDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTDELSSPVD 388 (392)
Q Consensus 322 ~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~~~ 388 (392)
|++++|+++++.|+.|++||+.++...........+...+..++|+||++++++++.
T Consensus 277 ----------~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 277 ----------PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp ----------TTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTE
T ss_pred ----------CCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecce
Confidence 444444445566778888888776642222233334466778999999999987654
No 103
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4e-34 Score=249.69 Aligned_cols=231 Identities=15% Similarity=0.219 Sum_probs=198.3
Q ss_pred CCccCCeEEEEECCCc----cceeeeccCCcCeeEEEecC--CCCeEEEEeCCCeEEEEeCCCC---------ceeEEec
Q psy17243 1 MGGMDCLVNVWQMNSH----ELQSTMEGHLNTVSCVAISP--NSIFAVSGSEDNTAKVWGLTLG---------SVVSTFK 65 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~dg~v~iwd~~~~---------~~~~~~~ 65 (392)
+|+.||.|++||+.++ +....+.+|...|++++|+| ++++|++++.||.|++||++++ +.+..+.
T Consensus 28 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 107 (351)
T 3f3f_A 28 TCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLN 107 (351)
T ss_dssp EEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEEC
T ss_pred EeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeec
Confidence 4788999999999876 46677789999999999999 6899999999999999999887 5678888
Q ss_pred ccccceEEEEEecC--CCEEEEEeCCCeEEEEEcCCceeeee----------------cccceeEEEEeCC---CCEEEE
Q psy17243 66 SHQSTILAVAVLSD--SRRVVTSDKAGVIAVWVADNAQLLYS----------------ALGPSKCLTVTHN---MKYIVS 124 (392)
Q Consensus 66 ~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~----------------~~~~~~~~~~~~~---~~~l~~ 124 (392)
.|...|.+++|+|+ +++|++++.|+.|++||+.+++.+.. ....+.++.|+|+ +..+++
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~ 187 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAV 187 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEE
Confidence 99999999999999 99999999999999999988765432 2346789999997 999999
Q ss_pred ecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCC----CEEEEeeCCCcEEEEEcCCC----------------
Q psy17243 125 GDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDS----QYLITGSRDMSLKVWQVVGG---------------- 184 (392)
Q Consensus 125 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~---------------- 184 (392)
++.++.+.+|+...... ........|...|.+++|+|++ ++|++++.||.|++||++++
T Consensus 188 ~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 266 (351)
T 3f3f_A 188 SALEQAIIYQRGKDGKL-HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF 266 (351)
T ss_dssp EETTEEEEEEECTTSCE-EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred ecCCCcEEEEccCCCce-eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence 99999997777653322 2233445789999999999998 89999999999999999875
Q ss_pred ------------------------------eEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeee
Q psy17243 185 ------------------------------KLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 185 ------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 233 (392)
+.+..+.+|...|++++|+ +++.+|++++.||.|++||+.+++....+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWN-LTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ------------------------CCSEEEEEEEEECTTSSCEEEEEEC-SSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEc-CCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 5677788899999999999 67889999999999999999988765544
No 104
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.1e-34 Score=251.75 Aligned_cols=247 Identities=12% Similarity=0.122 Sum_probs=191.9
Q ss_pred CCeEEEEECCCccce----------eeeccCCcCeeEEEecCCCCeEEEE-----------eCCCeEEEEeCCCCceeE-
Q psy17243 5 DCLVNVWQMNSHELQ----------STMEGHLNTVSCVAISPNSIFAVSG-----------SEDNTAKVWGLTLGSVVS- 62 (392)
Q Consensus 5 dg~i~vwd~~~~~~~----------~~~~~h~~~v~~~~~~~~~~~l~~~-----------~~dg~v~iwd~~~~~~~~- 62 (392)
++.|++|++...... ..+.+|...|.++++++ +.+++| +.|+.+++|++.......
T Consensus 42 ~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~ 119 (365)
T 4h5i_A 42 PNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLE 119 (365)
T ss_dssp CEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEE
T ss_pred CCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEE
Confidence 457999998654321 24567888999887754 355554 457889999987653221
Q ss_pred ---Ee-----cccccceEEEEEecCCCEEEEEe--CCCeEEEEEcCCceeeeec--ccceeEEEEeCCCCEEEEecCCCc
Q psy17243 63 ---TF-----KSHQSTILAVAVLSDSRRVVTSD--KAGVIAVWVADNAQLLYSA--LGPSKCLTVTHNMKYIVSGDGDNS 130 (392)
Q Consensus 63 ---~~-----~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~ 130 (392)
.. ..+...+.+++|+|||+++++++ .|++|++||+++++.+..+ ...+.+++|+|+++++++++.++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~- 198 (365)
T 4h5i_A 120 FLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS- 198 (365)
T ss_dssp EEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-
T ss_pred EeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-
Confidence 11 12345689999999999987654 6899999999999887654 45789999999999999998655
Q ss_pred EEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCC----cEEEEEcCCCeE----EEEEecCCCceeEEEE
Q psy17243 131 LRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDM----SLKVWQVVGGKL----AQVLVGHTDHVSCVAV 202 (392)
Q Consensus 131 i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~----~~~~~~~~~~v~~~~~ 202 (392)
+.+|+..++... .......|...|.+++|+|+++++++++.++ .+++|++..... ...+.+|...|++++|
T Consensus 199 ~~~~~~~~~~~~-~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 277 (365)
T 4h5i_A 199 LEVISTVTGSCI-ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV 277 (365)
T ss_dssp EEEEETTTCCEE-EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE
T ss_pred EEEEEeccCcce-eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEE
Confidence 556655433221 1122346788899999999999999998887 688999877653 3557789999999999
Q ss_pred ecCCCcEEEEecCCCeEEEEECCCCceeeee-cccccceeEEEEcCCCeEEEEcC
Q psy17243 203 AVTNKSLVVSGSKDSNLIVWDMETGGEEHFL-AGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 203 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+ +++.+|++|+.|+.|+|||+++++++..+ .+|...|++++|+|||++++++.
T Consensus 278 S-pdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S 331 (365)
T 4h5i_A 278 D-MKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVS 331 (365)
T ss_dssp C-TTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEE
T ss_pred C-CCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEe
Confidence 9 78899999999999999999999999875 78999999999999999888753
No 105
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.6e-34 Score=255.61 Aligned_cols=239 Identities=16% Similarity=0.227 Sum_probs=206.5
Q ss_pred eeeccCCcCeeEEEecCC-CCeEEEEeCCCeEEEEeCCC----------CceeEEecccccceEEEEEecCCC-EEEEEe
Q psy17243 20 STMEGHLNTVSCVAISPN-SIFAVSGSEDNTAKVWGLTL----------GSVVSTFKSHQSTILAVAVLSDSR-RVVTSD 87 (392)
Q Consensus 20 ~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~v~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 87 (392)
.....|.+.|++++|+|+ +.+|++++.||.|++||+.+ .+.+..+.+|...|.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 344569999999999997 67999999999999999986 677888889999999999999998 999999
Q ss_pred CCCeEEEEEcCCce----------eeeecccceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceE
Q psy17243 88 KAGVIAVWVADNAQ----------LLYSALGPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEIT 156 (392)
Q Consensus 88 ~d~~i~iwd~~~~~----------~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~ 156 (392)
.||.|++||+..+. ....+...+.+++|+| ++.+|++++.|+.|++||++.............|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 99999999998732 1224556789999999 788999999999999999986643344445558899999
Q ss_pred EEEEEcCCC-EEEEeeCCCcEEEEEcCC-CeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCC--------
Q psy17243 157 CFTVTWDSQ-YLITGSRDMSLKVWQVVG-GKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMET-------- 226 (392)
Q Consensus 157 ~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-------- 226 (392)
+++|+|++. +|++|+.||.|++||+++ .+++..+..|...|++++|+|.+..+|++++.|+.|+|||+..
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 999999987 788999999999999998 5678889999999999999976667899999999999999987
Q ss_pred ------CceeeeecccccceeEEEEcCCCe-EEEEcCCC
Q psy17243 227 ------GGEEHFLAGHLGCVTCVKLAGDGT-VAMSDLPP 258 (392)
Q Consensus 227 ------~~~~~~~~~~~~~v~~~~~~~dg~-~~~~~~~~ 258 (392)
.+.+..+.+|...|.+++|+|++. +++++..+
T Consensus 362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d 400 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED 400 (430)
T ss_dssp HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECC
Confidence 356777888999999999999999 77776544
No 106
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.3e-34 Score=253.42 Aligned_cols=235 Identities=13% Similarity=0.107 Sum_probs=175.6
Q ss_pred EEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEE-EEEeC
Q psy17243 10 VWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRV-VTSDK 88 (392)
Q Consensus 10 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~ 88 (392)
+|++.+.+.+..+..|...|++++|+|++++|++|+.++ +++|++++++....... ..+..+.+.++++.+ ++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECC
Confidence 567777788888889999999999999999999998775 78999998776655442 257788888888877 56777
Q ss_pred CCeEEEEEcCCceeeeec--ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCC-CCCCcceeeeccccceEEEEEEcCCC
Q psy17243 89 AGVIAVWVADNAQLLYSA--LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQ-THKDDERFTVSHSEEITCFTVTWDSQ 165 (392)
Q Consensus 89 d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~ 165 (392)
++.|++||+.+++.+..+ ..++.++.++++. ++++ .++.|++||+... ........ +...+++++ .
T Consensus 80 d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~------~~~~~~~s~--~ 148 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR------FGGVCEFSN--G 148 (355)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE------EEEEEEEET--T
T ss_pred ccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc------CCceEEEEc--c
Confidence 899999999999877644 4577888887764 4433 4789999999865 22222211 444566776 5
Q ss_pred EEEE--eeCCCcEEEEEcCCCe---------------E-EEEEecCCCceeEEEEecCCCcEEEEecCCCe-EEEEECCC
Q psy17243 166 YLIT--GSRDMSLKVWQVVGGK---------------L-AQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSN-LIVWDMET 226 (392)
Q Consensus 166 ~l~~--~~~dg~i~i~d~~~~~---------------~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~iwd~~~ 226 (392)
++++ |+.+|.|++||+++++ + +..+.+|...|++++|+ +++.+|++++.|++ |++||+++
T Consensus 149 ~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s-~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 149 LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN-RKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC-TTSSEEEEEETTCSEEEEEETTT
T ss_pred EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC-CCCCEEEEEeCCCCEEEEEECCC
Confidence 6666 6889999999998865 2 67889999999999999 68899999999998 99999999
Q ss_pred Cceeeeec-c-cccceeEEEEcCCCeEEEEcCCCC
Q psy17243 227 GGEEHFLA-G-HLGCVTCVKLAGDGTVAMSDLPPS 259 (392)
Q Consensus 227 ~~~~~~~~-~-~~~~v~~~~~~~dg~~~~~~~~~~ 259 (392)
++++..+. + |...|.+++|+|||++++++..++
T Consensus 228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTC
T ss_pred CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCC
Confidence 99999998 5 999999999999999999987553
No 107
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.1e-33 Score=248.31 Aligned_cols=223 Identities=9% Similarity=0.069 Sum_probs=181.7
Q ss_pred CccCCeEEEEECCCccceee---------eccCCcCeeEEEecCCCCeEEE--EeCCCeEEEEeCCCCceeEEecccccc
Q psy17243 2 GGMDCLVNVWQMNSHELQST---------MEGHLNTVSCVAISPNSIFAVS--GSEDNTAKVWGLTLGSVVSTFKSHQST 70 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~---------~~~h~~~v~~~~~~~~~~~l~~--~~~dg~v~iwd~~~~~~~~~~~~~~~~ 70 (392)
|+.|+.+++|++.+.+.... ...+...+.+++|+|||+++++ ++.|++|+|||+++++++..+. |...
T Consensus 100 ~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~ 178 (365)
T 4h5i_A 100 GKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGE 178 (365)
T ss_dssp TSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSC
T ss_pred ecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCc
Confidence 56789999999865432211 1234566899999999998765 4578999999999999998887 7888
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeee-----cccceeEEEEeCCCCEEEEecCCC----cEEEEeCCCCCC
Q psy17243 71 ILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYS-----ALGPSKCLTVTHNMKYIVSGDGDN----SLRIWPTSPQTH 141 (392)
Q Consensus 71 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~ 141 (392)
|.+++|+|+++++++++.++ +.+|+..+++.+.. +...+.+++|+|+++++++++.++ .+++|++.....
T Consensus 179 V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~ 257 (365)
T 4h5i_A 179 VKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT 257 (365)
T ss_dssp CCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE
T ss_pred eEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee
Confidence 99999999999999998554 66666666654432 334688999999999999998887 578888764332
Q ss_pred CC-cceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEE-ecCCCceeEEEEecCCCcEEEEecCCCeE
Q psy17243 142 KD-DERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVL-VGHTDHVSCVAVAVTNKSLVVSGSKDSNL 219 (392)
Q Consensus 142 ~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 219 (392)
.. .......|...|++++|+|++++|++|+.|++|+|||+++++++..+ .+|...|++++|+ +++.+|++|+.|++|
T Consensus 258 ~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fS-pdg~~laS~S~D~tv 336 (365)
T 4h5i_A 258 SVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTIS-PDSTYVASVSAANTI 336 (365)
T ss_dssp EEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEEC-TTSCEEEEEETTSEE
T ss_pred cceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEEC-CCCCEEEEEeCCCeE
Confidence 21 12234578889999999999999999999999999999999999875 7899999999999 789999999999999
Q ss_pred EEEECCCC
Q psy17243 220 IVWDMETG 227 (392)
Q Consensus 220 ~iwd~~~~ 227 (392)
+|||+...
T Consensus 337 rvw~ip~~ 344 (365)
T 4h5i_A 337 HIIKLPLN 344 (365)
T ss_dssp EEEECCTT
T ss_pred EEEEcCCC
Confidence 99999643
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.2e-32 Score=244.60 Aligned_cols=247 Identities=15% Similarity=0.134 Sum_probs=203.7
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeE-EEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecC
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFA-VSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSD 79 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 79 (392)
+++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+. .+.+++|+|+
T Consensus 7 s~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spd 84 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPD 84 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTT
T ss_pred EcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCC
Confidence 46789999999999999999988665 58999999999876 677789999999999999998888554 8999999999
Q ss_pred CCEEEEEe-CCCeEEEEEcCCceeeeecc--cceeEEEEeCCCCEE-EEecCCCcEEEEeCCCCCCCCcceeeeccccce
Q psy17243 80 SRRVVTSD-KAGVIAVWVADNAQLLYSAL--GPSKCLTVTHNMKYI-VSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEI 155 (392)
Q Consensus 80 ~~~l~~~~-~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v 155 (392)
+++|++++ .++.|++||+.+++.+.... ..+.+++|+|+++.+ ++++.++.|++||+.+.+. .... .....+
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~-~~~~~~ 160 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV---INTV-SVGRSP 160 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---EEEE-ECCSSE
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---EEEE-ecCCCc
Confidence 99886554 67999999999998765443 467899999999977 6788899999999974432 2222 334567
Q ss_pred EEEEEEcCCCEE-EEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEec---CCCeEEEEECCCCceee
Q psy17243 156 TCFTVTWDSQYL-ITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGS---KDSNLIVWDMETGGEEH 231 (392)
Q Consensus 156 ~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~ 231 (392)
.+++|+|++++| ++++.++.|++||+++++.+..+. +...+.+++|+ +++.++++++ .++.|++||+.+++.+.
T Consensus 161 ~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~-~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~ 238 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVN-PEGTKAYVTNVDKYFNTVSMIDTGTNKITA 238 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEEC-TTSSEEEEEEECSSCCEEEEEETTTTEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEEC-CCCCEEEEEecCcCCCcEEEEECCCCeEEE
Confidence 999999999887 567788999999999998887776 56688999999 5666666666 68999999999999888
Q ss_pred eecccccceeEEEEcCCCeEE-EEcC
Q psy17243 232 FLAGHLGCVTCVKLAGDGTVA-MSDL 256 (392)
Q Consensus 232 ~~~~~~~~v~~~~~~~dg~~~-~~~~ 256 (392)
.+..+. .+.+++|+|||+.+ +++.
T Consensus 239 ~~~~~~-~~~~~~~s~dg~~l~~s~~ 263 (391)
T 1l0q_A 239 RIPVGP-DPAGIAVTPDGKKVYVALS 263 (391)
T ss_dssp EEECCS-SEEEEEECTTSSEEEEEET
T ss_pred EEecCC-CccEEEEccCCCEEEEEcC
Confidence 887654 57899999999877 4543
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-33 Score=245.78 Aligned_cols=232 Identities=10% Similarity=0.054 Sum_probs=197.1
Q ss_pred eeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc---eeEEecccccceEEEEEecCCC-EEEEEeCCCeEEEE
Q psy17243 20 STMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS---VVSTFKSHQSTILAVAVLSDSR-RVVTSDKAGVIAVW 95 (392)
Q Consensus 20 ~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw 95 (392)
....+|.+.|++++|+|++++|++++.||.|++|++.+++ ....+..|...|.+++|+|+++ +|++++.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3345799999999999999999999999999999998887 3455557999999999999999 99999999999999
Q ss_pred Ec-CCceee--ee--cccceeEEEEeCCCCEEEEecCCCcEEEEeCCC---------CCCCCcceeeeccccceEEEEEE
Q psy17243 96 VA-DNAQLL--YS--ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSP---------QTHKDDERFTVSHSEEITCFTVT 161 (392)
Q Consensus 96 d~-~~~~~~--~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~~~~~v~~~~~~ 161 (392)
|+ .+++.. .. +...+.+++|+| ++++++++.|+.|++||++. ..... . ..+...+.+++|+
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~-~~~~~~v~~~~~~ 159 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN---N-TKVKNKIFTMDTN 159 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS---S-SSSCCCEEEEEEC
T ss_pred EeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeee---E-EeeCCceEEEEec
Confidence 99 877553 34 566889999999 99999999999999999874 22222 1 2378899999999
Q ss_pred cCCCEEEEeeCCCcEEEEEcCC-Ce--EEEEEecCCCceeEEEEecC-CCcEEEEecCCCeEEEEECCCC------ceee
Q psy17243 162 WDSQYLITGSRDMSLKVWQVVG-GK--LAQVLVGHTDHVSCVAVAVT-NKSLVVSGSKDSNLIVWDMETG------GEEH 231 (392)
Q Consensus 162 ~~~~~l~~~~~dg~i~i~d~~~-~~--~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~------~~~~ 231 (392)
|++ +++++.++.|++||+++ +. .......|...+.+++|+ + ++.++++++.||.|++|+++.. +...
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL-PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC-SGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC-CCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 877 99999999999999988 54 334455688899999999 5 7889999999999999999887 7777
Q ss_pred eeccccc---------ceeEEEEcCCCeEEEEcCCCC
Q psy17243 232 FLAGHLG---------CVTCVKLAGDGTVAMSDLPPS 259 (392)
Q Consensus 232 ~~~~~~~---------~v~~~~~~~dg~~~~~~~~~~ 259 (392)
.+..|.. .|.+++|+|++++++++..++
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 273 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG 273 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS
T ss_pred eeecccccccccccceeEEEEEEcCCCCEEEEecCCc
Confidence 8887765 999999999999999876543
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-33 Score=250.51 Aligned_cols=227 Identities=13% Similarity=0.130 Sum_probs=191.2
Q ss_pred CCcCeeEEEecCCCCeE-EEEeCCCeEEEEeCC--CCceeEEec--ccccceEEEEEecCCCEEEEEeCCCeEEEEEcCC
Q psy17243 25 HLNTVSCVAISPNSIFA-VSGSEDNTAKVWGLT--LGSVVSTFK--SHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADN 99 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l-~~~~~dg~v~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 99 (392)
|...|.+++|+|++++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|++++|++++.+|.+++|++.+
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~ 180 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINS 180 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCC
Confidence 33479999999999996 899999999999999 888888876 5678899999999999999999999999999987
Q ss_pred ceee-------eecccceeEEEEeCC---CCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEE
Q psy17243 100 AQLL-------YSALGPSKCLTVTHN---MKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLIT 169 (392)
Q Consensus 100 ~~~~-------~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 169 (392)
++.. ..+...+.+++|+|+ +++|++++.|+.|++||+..... ......+|...|.+++|+ ++++|++
T Consensus 181 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 181 IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI--VDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC--EEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce--eeeeecCCCCceEEEEEC-CCCEEEE
Confidence 7643 345568899999999 99999999999999999974432 122244788999999999 9999999
Q ss_pred eeCCCcEEEEEcCCCeEEEEEec-------------------------CCCceeEEEEecCCCcEEEEec-CCCeEEEEE
Q psy17243 170 GSRDMSLKVWQVVGGKLAQVLVG-------------------------HTDHVSCVAVAVTNKSLVVSGS-KDSNLIVWD 223 (392)
Q Consensus 170 ~~~dg~i~i~d~~~~~~~~~~~~-------------------------~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd 223 (392)
++.|+.|++||+++++++..+.. ....|..++|+ +++.+|++++ .|+.|++|+
T Consensus 258 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 258 AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS-KNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC-SSSSEEEEEETTCSEEEEEE
T ss_pred EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe-CCCCEEEEEECCCCeEEEEE
Confidence 99999999999999998888763 23568899999 5677777777 899999999
Q ss_pred C--CCC---ceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 224 M--ETG---GEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 224 ~--~~~---~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+ .++ +.+..+..| ..|.+++|+|++.+++.+.
T Consensus 337 ~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 337 MSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp ECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECC
T ss_pred eccCCCCceeeccEeccC-CceEEEEecCCcEEEEEec
Confidence 9 555 566677777 8899999999766655543
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=255.62 Aligned_cols=208 Identities=16% Similarity=0.227 Sum_probs=176.9
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc---eeEEecc------------------------------------
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS---VVSTFKS------------------------------------ 66 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~---~~~~~~~------------------------------------ 66 (392)
..++.+++|+|+|++|+++ .++.|++||+.+++ .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999966665 57899999999998 6555543
Q ss_pred ------------------cccceEEEEEecCCCEE-EEEeCCCeEEEEEcC--Cceeeeec-----ccceeEEEEeCCCC
Q psy17243 67 ------------------HQSTILAVAVLSDSRRV-VTSDKAGVIAVWVAD--NAQLLYSA-----LGPSKCLTVTHNMK 120 (392)
Q Consensus 67 ------------------~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~--~~~~~~~~-----~~~~~~~~~~~~~~ 120 (392)
|.+.|.+++|+|++++| ++++.||.|++||+. +++.+..+ ...+.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 22369999999999996 889999999999999 77665543 35788999999999
Q ss_pred EEEEecCCCcEEEEeCCCCCCCC-cceeeeccccceEEEEEEcC---CCEEEEeeCCCcEEEEEcCCCeEEEE-EecCCC
Q psy17243 121 YIVSGDGDNSLRIWPTSPQTHKD-DERFTVSHSEEITCFTVTWD---SQYLITGSRDMSLKVWQVVGGKLAQV-LVGHTD 195 (392)
Q Consensus 121 ~l~~~~~d~~i~~~d~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~ 195 (392)
+|++++.++.|++|++....... .......|...|.+++|+|+ +++|++++.|+.|++||+++++.+.. +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999998655443 33344578899999999999 99999999999999999999988877 558999
Q ss_pred ceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccc
Q psy17243 196 HVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGH 236 (392)
Q Consensus 196 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 236 (392)
.|.+++|+ ++.+|++++.|+.|++||+.+++++..+..+
T Consensus 243 ~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 281 (450)
T 2vdu_B 243 FVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp CEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred ceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecch
Confidence 99999999 7889999999999999999999988877643
No 112
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-33 Score=245.87 Aligned_cols=228 Identities=16% Similarity=0.232 Sum_probs=195.4
Q ss_pred CCccCCeEEEEECC--CccceeeeccCCcCeeEEEecCC--CCeEEEEeCCCeEEEEeCCCCc--eeEEecccccceEEE
Q psy17243 1 MGGMDCLVNVWQMN--SHELQSTMEGHLNTVSCVAISPN--SIFAVSGSEDNTAKVWGLTLGS--VVSTFKSHQSTILAV 74 (392)
Q Consensus 1 tg~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~ 74 (392)
+|+.||.|++||+. +++.+..+.+|...|++++|+++ +++|++++.||.|++||+++++ .+..+..|...|.++
T Consensus 28 ~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 107 (379)
T 3jrp_A 28 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSV 107 (379)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence 46789999999998 67788889999999999999987 8999999999999999999987 777888899999999
Q ss_pred EEecC--CCEEEEEeCCCeEEEEEcCCcee-----eeecccceeEEEEeC-------------CCCEEEEecCCCcEEEE
Q psy17243 75 AVLSD--SRRVVTSDKAGVIAVWVADNAQL-----LYSALGPSKCLTVTH-------------NMKYIVSGDGDNSLRIW 134 (392)
Q Consensus 75 ~~~~~--~~~l~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~-------------~~~~l~~~~~d~~i~~~ 134 (392)
+|+|+ +++|++++.|+.|++||+.+... +..+...+.+++|+| ++.++++++.|+.|++|
T Consensus 108 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~ 187 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 187 (379)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEE
T ss_pred EeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEE
Confidence 99999 99999999999999999988732 234556889999999 69999999999999999
Q ss_pred eCCCCCCCC-cceeeeccccceEEEEEEcC---CCEEEEeeCCCcEEEEEcCCCe---EEEEE--ecCCCceeEEEEecC
Q psy17243 135 PTSPQTHKD-DERFTVSHSEEITCFTVTWD---SQYLITGSRDMSLKVWQVVGGK---LAQVL--VGHTDHVSCVAVAVT 205 (392)
Q Consensus 135 d~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~---~~~~~--~~~~~~v~~~~~~~~ 205 (392)
|++...... .......|...|.+++|+|+ +++|++++.||.|++||+++++ ....+ ..|...|++++|+ +
T Consensus 188 d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~ 266 (379)
T 3jrp_A 188 KYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWS-L 266 (379)
T ss_dssp EEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEEC-S
T ss_pred EecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEc-C
Confidence 997544322 22344568899999999999 8999999999999999998864 22222 3488899999999 6
Q ss_pred CCcEEEEecCCCeEEEEECCCCce
Q psy17243 206 NKSLVVSGSKDSNLIVWDMETGGE 229 (392)
Q Consensus 206 ~~~~l~~~~~dg~i~iwd~~~~~~ 229 (392)
++.+|++++.||.|++|++..+..
T Consensus 267 ~g~~l~~~~~dg~i~iw~~~~~~~ 290 (379)
T 3jrp_A 267 SGNVLALSGGDNKVTLWKENLEGK 290 (379)
T ss_dssp SSCCEEEEESSSSEEEEEEEETTE
T ss_pred CCCEEEEecCCCcEEEEeCCCCCc
Confidence 788899999999999999886543
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8.1e-33 Score=249.10 Aligned_cols=304 Identities=12% Similarity=0.056 Sum_probs=233.8
Q ss_pred ccCC--eEEEEECCCc--cceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeE-----EecccccceEE
Q psy17243 3 GMDC--LVNVWQMNSH--ELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVS-----TFKSHQSTILA 73 (392)
Q Consensus 3 ~~dg--~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~-----~~~~~~~~v~~ 73 (392)
+.++ .|.++|..++ +.+..+..+ ..+.+++|+|++.++++++.++.|++||+.+++... .+.+|...|.+
T Consensus 96 ~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~ 174 (433)
T 3bws_A 96 PEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVET 174 (433)
T ss_dssp GGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEE
T ss_pred cCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeE
Confidence 4455 4444444334 555666644 456699999988888888889999999999998887 44578889999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEE-ecCCCcEEEEeCCCCCCCCcceeee
Q psy17243 74 VAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVS-GDGDNSLRIWPTSPQTHKDDERFTV 149 (392)
Q Consensus 74 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~~~ 149 (392)
++|+++++.+++++.++.|++||+++++.+..+ ...+.+++++|+++.+++ ++.++.|++||+++... .. ..
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~---~~-~~ 250 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE---IR-KT 250 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE---EE-EC
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE---EE-Ee
Confidence 999999999999999999999999998776654 346789999999998855 55799999999974422 22 22
Q ss_pred ccccceEEEEEEcCCCEEEEee--------CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEE
Q psy17243 150 SHSEEITCFTVTWDSQYLITGS--------RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIV 221 (392)
Q Consensus 150 ~~~~~v~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 221 (392)
.....+.+++|+|++++|++++ .|+.|++||+++++.+..+. |...+.+++|+|.+..++++++.|+.|++
T Consensus 251 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v 329 (433)
T 3bws_A 251 DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEV 329 (433)
T ss_dssp CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEE
T ss_pred cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 3445689999999999999888 58899999999998777663 56688999999655567788899999999
Q ss_pred EECCCCceeeeecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeeccc
Q psy17243 222 WDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDE 301 (392)
Q Consensus 222 wd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (392)
||+.+++.+..+. +...+.+++|+|+|++++.+.....
T Consensus 330 ~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~----------------------------------------- 367 (433)
T 3bws_A 330 YDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPN----------------------------------------- 367 (433)
T ss_dssp EETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCC-----------------------------------------
T ss_pred EECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCC-----------------------------------------
Confidence 9999998887776 6778999999999997776531100
Q ss_pred ccceeEEEeeccccceecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCCCccccccccccccCccccccccCcc
Q psy17243 302 RLKRRFSVSASMEEISKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTD 381 (392)
Q Consensus 302 ~~~~~~~~s~s~d~~~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~ 381 (392)
.++..+++ +++.||.|++||+.+++.... +.....+..++|+|||+
T Consensus 368 -----------------------------~~~~~~~~-~g~~dg~v~~~d~~~~~~~~~----~~~~~~~~~~~~s~dg~ 413 (433)
T 3bws_A 368 -----------------------------HPTEGYLK-KGLVLGKVYVIDTTTDTVKEF----WEAGNQPTGLDVSPDNR 413 (433)
T ss_dssp -----------------------------CTTTCTTS-CCSSCCEEEEEETTTTEEEEE----EECSSSEEEEEECTTSC
T ss_pred -----------------------------cccccccc-ccccceEEEEEECCCCcEEEE----ecCCCCCceEEEcCCCC
Confidence 01233445 888999999999987665222 22344566799999999
Q ss_pred CCCCccc
Q psy17243 382 ELSSPVD 388 (392)
Q Consensus 382 ~l~~~~~ 388 (392)
+|++++.
T Consensus 414 ~l~~~~~ 420 (433)
T 3bws_A 414 YLVISDF 420 (433)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 9986653
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-33 Score=241.89 Aligned_cols=243 Identities=10% Similarity=0.061 Sum_probs=188.6
Q ss_pred CCccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCC---------CCceeEEec-ccccc
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLT---------LGSVVSTFK-SHQST 70 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~---------~~~~~~~~~-~~~~~ 70 (392)
+|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+. .|..+
T Consensus 53 sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (343)
T 3lrv_A 53 CRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANE 127 (343)
T ss_dssp EEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSC
T ss_pred EECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCC
Confidence 58899999999999999888887 577889999998 9999999999999665 555454444 56788
Q ss_pred eEEEEEec--CCCEEEEEeCCCeEEEEEcCCceeeeec----ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc
Q psy17243 71 ILAVAVLS--DSRRVVTSDKAGVIAVWVADNAQLLYSA----LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD 144 (392)
Q Consensus 71 v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 144 (392)
|.+++|+| +++++++++.|+.|++||+++++.+... ...+.+++|+|++.+|++|+.||.|++||+++.....
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~- 206 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS- 206 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC-
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc-
Confidence 99999999 9999999999999999999998876433 3368899999999999999999999999998654321
Q ss_pred ceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEec---CCCcee--EEEEecCCCcEEEEecC-CCe
Q psy17243 145 ERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVG---HTDHVS--CVAVAVTNKSLVVSGSK-DSN 218 (392)
Q Consensus 145 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~--~~~~~~~~~~~l~~~~~-dg~ 218 (392)
..+...|..+|.+++|+|++.+|++++ ++.|++||+++++.+..+.. |...+. +++|+ +++.+|++++. |+.
T Consensus 207 ~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~l~~~s~~d~~ 284 (343)
T 3lrv_A 207 SRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDID-DSGKNMIAYSNESNS 284 (343)
T ss_dssp EECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEEC-TTSSEEEEEETTTTE
T ss_pred cEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEEC-CCCCEEEEecCCCCc
Confidence 122223899999999999999999999 55999999998876554433 334444 69999 67888888887 999
Q ss_pred EEEEECCCCceeeeecccccceeEEEEcC---CCeEEEEc
Q psy17243 219 LIVWDMETGGEEHFLAGHLGCVTCVKLAG---DGTVAMSD 255 (392)
Q Consensus 219 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---dg~~~~~~ 255 (392)
|++|++.+....... .++..+.|.+ +++.+++.
T Consensus 285 i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~ 320 (343)
T 3lrv_A 285 LTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVV 320 (343)
T ss_dssp EEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEE
T ss_pred EEEEEEcccccceEe----cCceeEecCccccccceeEEE
Confidence 999999766543332 3455666665 55555543
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.2e-32 Score=244.34 Aligned_cols=223 Identities=8% Similarity=0.107 Sum_probs=168.2
Q ss_pred cCCCCeEEEEeCCCeEEEEeCCCCcee-----EEecccccceEEEEEec--------CCCEEEEEeCCCeEEEEEcCCce
Q psy17243 35 SPNSIFAVSGSEDNTAKVWGLTLGSVV-----STFKSHQSTILAVAVLS--------DSRRVVTSDKAGVIAVWVADNAQ 101 (392)
Q Consensus 35 ~~~~~~l~~~~~dg~v~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~iwd~~~~~ 101 (392)
.+++.+|++++.|++|+|||.++++.. ..+.+|.+.|++++|+| ++++|++++.|++|++||+.++.
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 345568999999999999999988654 34678999999999998 78899999999999999998776
Q ss_pred ee---eecccceeEEEEeCCCC-EEEEecCCCcEEEEeCCCCCCCCcce----------------------eeeccccce
Q psy17243 102 LL---YSALGPSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQTHKDDER----------------------FTVSHSEEI 155 (392)
Q Consensus 102 ~~---~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~----------------------~~~~~~~~v 155 (392)
.+ ..+..++.+++|+|++. +|++++.|+.|++||+++........ ....|...+
T Consensus 178 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 178 PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 54 34567889999999874 79999999999999998654322111 112466788
Q ss_pred EEEEEE-cCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeE------------------EEEec-CCCcEEEEecC
Q psy17243 156 TCFTVT-WDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSC------------------VAVAV-TNKSLVVSGSK 215 (392)
Q Consensus 156 ~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~------------------~~~~~-~~~~~l~~~~~ 215 (392)
.++.|+ ++++.|++++.|+++++||+..++....+..|...+.. ..++| .++.++++|+.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 889987 78999999999999999999887766655544433332 23333 34557788899
Q ss_pred CCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCC
Q psy17243 216 DSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 216 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~ 257 (392)
||.|++||+.+++....+..|..+|.+++|+|||++++++.+
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred CCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 999999999999998888889999999999999999999764
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.8e-31 Score=236.96 Aligned_cols=232 Identities=19% Similarity=0.257 Sum_probs=192.1
Q ss_pred CCccCCeEEEEECCCccceeeec-------------cCCcCeeEEEecC-CCCeEEEEeCCCeEEEEeCCCCceeEEecc
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTME-------------GHLNTVSCVAISP-NSIFAVSGSEDNTAKVWGLTLGSVVSTFKS 66 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~-------------~h~~~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 66 (392)
+|+.||.|++||+.+++....+. +|...|.+++|+| ++.+|++++.||.|++||+.+++....+.
T Consensus 61 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~- 139 (408)
T 4a11_B 61 SGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN- 139 (408)
T ss_dssp EEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred EEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-
Confidence 47889999999999887766654 5999999999999 77899999999999999999999988887
Q ss_pred cccceEEEEEecCC---CEEEEEeCCCeEEEEEcCCceeeee---cccceeEEEEeCCCC-EEEEecCCCcEEEEeCCCC
Q psy17243 67 HQSTILAVAVLSDS---RRVVTSDKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQ 139 (392)
Q Consensus 67 ~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~ 139 (392)
+...+.++.+.+.+ .++++++.++.|++||+.+++.+.. +...+.+++|+|+++ .+++++.||.|++||++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 140 FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 78889999999854 4999999999999999998876554 445789999999998 5899999999999999754
Q ss_pred CCCC-------------cceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCC----------------------
Q psy17243 140 THKD-------------DERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGG---------------------- 184 (392)
Q Consensus 140 ~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------------------- 184 (392)
.... .......|...|.+++|+|++++|++++.||.|++||++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (408)
T 4a11_B 220 SGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTV 299 (408)
T ss_dssp SCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEE
T ss_pred CcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEE
Confidence 3111 11112468889999999999999999999999999998654
Q ss_pred -------------------------eEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeec
Q psy17243 185 -------------------------KLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLA 234 (392)
Q Consensus 185 -------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 234 (392)
+++..+.+|...|++++|+ +++.+|++++.||.|++||+.+++.+....
T Consensus 300 ~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 300 SCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQ-SNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp CCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEE-TTTTEEEEEETTSCEEEEEECC--------
T ss_pred ecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEc-CCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 3456677899999999999 678899999999999999999988765543
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.3e-31 Score=239.07 Aligned_cols=225 Identities=19% Similarity=0.276 Sum_probs=192.4
Q ss_pred CCccCCeEEEEECCC----------ccceeeeccCCcCeeEEEecCCCC-eEEEEeCCCeEEEEeCCCCce-------eE
Q psy17243 1 MGGMDCLVNVWQMNS----------HELQSTMEGHLNTVSCVAISPNSI-FAVSGSEDNTAKVWGLTLGSV-------VS 62 (392)
Q Consensus 1 tg~~dg~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~-------~~ 62 (392)
+|+.||.|++|++.+ .+....+.+|...|.+++|+|++. +|++|+.||.|++|++.++.. ..
T Consensus 146 t~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 225 (430)
T 2xyi_A 146 TKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKN 225 (430)
T ss_dssp EECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSE
T ss_pred EECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccce
Confidence 468899999999986 677888899999999999999988 999999999999999987432 45
Q ss_pred EecccccceEEEEEec-CCCEEEEEeCCCeEEEEEcCCc---eee---eecccceeEEEEeCCCC-EEEEecCCCcEEEE
Q psy17243 63 TFKSHQSTILAVAVLS-DSRRVVTSDKAGVIAVWVADNA---QLL---YSALGPSKCLTVTHNMK-YIVSGDGDNSLRIW 134 (392)
Q Consensus 63 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~---~~~---~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~~~ 134 (392)
.+..|...|.+++|+| ++..|++++.|+.|++||++++ +.+ ..+...+.+++|+|++. ++++++.||.|++|
T Consensus 226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw 305 (430)
T 2xyi_A 226 IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 305 (430)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 6778999999999999 6789999999999999999976 232 34556889999999887 68899999999999
Q ss_pred eCCCCCCCCcceeeeccccceEEEEEEcCCC-EEEEeeCCCcEEEEEcCC--------------CeEEEEEecCCCceeE
Q psy17243 135 PTSPQTHKDDERFTVSHSEEITCFTVTWDSQ-YLITGSRDMSLKVWQVVG--------------GKLAQVLVGHTDHVSC 199 (392)
Q Consensus 135 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~--------------~~~~~~~~~~~~~v~~ 199 (392)
|++... ........|...|.+++|+|+++ +|++++.|+.|++||+.. .+.+..+.+|...|++
T Consensus 306 d~~~~~--~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 383 (430)
T 2xyi_A 306 DLRNLK--LKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD 383 (430)
T ss_dssp ETTCTT--SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE
T ss_pred eCCCCC--CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE
Confidence 998532 33445557899999999999984 799999999999999987 3667778889999999
Q ss_pred EEEecCCCcEEEEecCCCeEEEEECCCC
Q psy17243 200 VAVAVTNKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 200 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
++|+|.+..+|++++.||.|+||++...
T Consensus 384 ~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 384 FSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9999554449999999999999998753
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=239.04 Aligned_cols=241 Identities=10% Similarity=0.071 Sum_probs=190.4
Q ss_pred CCeEEEEECCCccceeeec-cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEeccccc-----ceEEEEEec
Q psy17243 5 DCLVNVWQMNSHELQSTME-GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQS-----TILAVAVLS 78 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~ 78 (392)
||.++.|++.+++....+. .|...|.+++|+|+|++||+++.||.|++||.+. ++..+. |.. .|.+++|+|
T Consensus 63 dg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP 139 (588)
T 2j04_A 63 LEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP 139 (588)
T ss_dssp CCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS
T ss_pred CCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC
Confidence 4455566666555444443 4688999999999999999999999999999554 666677 665 499999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCcee-------eeec-------ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc
Q psy17243 79 DSRRVVTSDKAGVIAVWVADNAQL-------LYSA-------LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD 144 (392)
Q Consensus 79 ~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~-------~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 144 (392)
+|++|++|+.||+|++||+.++.. +..+ ...+.+++|+|++ +++++.|+.|++||+........
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~ 217 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPV 217 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCC
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccc
Confidence 999999999999999999998752 2332 3478999999999 88899999999999975543211
Q ss_pred ceee-eccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEE--ecCCCcEEEEecCCCeEEE
Q psy17243 145 ERFT-VSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAV--AVTNKSLVVSGSKDSNLIV 221 (392)
Q Consensus 145 ~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~i 221 (392)
.... ..|...|.+++|+ ++.|++++ ++.|++||+.+++......+|...+..++| + +++..+++++.||+ ++
T Consensus 218 ~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s-~d~~~La~a~edG~-kl 292 (588)
T 2j04_A 218 SRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHE-KESTILLMSNKTSY-KV 292 (588)
T ss_dssp EEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTC-SSCEEEEECSSCEE-EE
T ss_pred eeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeC-CCCCEEEEEcCCCC-EE
Confidence 2222 3677899999999 68899887 699999999988875555489999999999 8 77889999999999 99
Q ss_pred EECCCC-----------------------ceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 222 WDMETG-----------------------GEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 222 wd~~~~-----------------------~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
|..+.- +.+..+.+ ...|.+++|+|||+.++++.
T Consensus 293 w~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 293 LLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp EESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEEEEE
T ss_pred EeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEEEEE
Confidence 987421 11222222 45699999999999999875
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-32 Score=235.50 Aligned_cols=214 Identities=11% Similarity=0.076 Sum_probs=175.8
Q ss_pred EecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcC---------Cceee
Q psy17243 33 AISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVAD---------NAQLL 103 (392)
Q Consensus 33 ~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~---------~~~~~ 103 (392)
.+.+++.+|++|+.||.|++||+++++.+..+. ...|.++.|+|+ +++++.|+.|++|+.. +++.+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 344578899999999999999999999888886 567888889887 9999999999999665 44444
Q ss_pred eecc----cceeEEEEeC--CCCEEEEecCCCcEEEEeCCCCCCCCcceee-eccccceEEEEEEcCCCEEEEeeCCCcE
Q psy17243 104 YSAL----GPSKCLTVTH--NMKYIVSGDGDNSLRIWPTSPQTHKDDERFT-VSHSEEITCFTVTWDSQYLITGSRDMSL 176 (392)
Q Consensus 104 ~~~~----~~~~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i 176 (392)
..+. .++.+++++| +++++++++.|+.|++||+++... .... ..+...+.+++|+|++.+|++|+.||.|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE---EEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE---EEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 4444 6799999999 999999999999999999985433 2222 3456679999999999999999999999
Q ss_pred EEEEcCCCeEE-EEEec-CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc---ccccee--EEEEcCCC
Q psy17243 177 KVWQVVGGKLA-QVLVG-HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG---HLGCVT--CVKLAGDG 249 (392)
Q Consensus 177 ~i~d~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~--~~~~~~dg 249 (392)
++||+++++.+ ..+.. |..+|++++|+ +++.+|++++ |+.|++||+++++.+..+.. |...+. +++|+|+|
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~l~fs-~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 195 DVYNLSSPDQASSRFPVDEEAKIKEVKFA-DNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp EEEESSCTTSCCEECCCCTTSCEEEEEEC-TTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred EEEECCCCCCCccEEeccCCCCEEEEEEe-CCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 99999999887 78887 99999999999 6788999998 55999999999887665543 444444 69999999
Q ss_pred eEEEEcC
Q psy17243 250 TVAMSDL 256 (392)
Q Consensus 250 ~~~~~~~ 256 (392)
++++++.
T Consensus 273 ~~l~~~s 279 (343)
T 3lrv_A 273 KNMIAYS 279 (343)
T ss_dssp SEEEEEE
T ss_pred CEEEEec
Confidence 9999954
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-32 Score=257.68 Aligned_cols=226 Identities=15% Similarity=0.204 Sum_probs=195.8
Q ss_pred CCccCCeEEEEECC--CccceeeeccCCcCeeEEEecCC--CCeEEEEeCCCeEEEEeCCCCc--eeEEecccccceEEE
Q psy17243 1 MGGMDCLVNVWQMN--SHELQSTMEGHLNTVSCVAISPN--SIFAVSGSEDNTAKVWGLTLGS--VVSTFKSHQSTILAV 74 (392)
Q Consensus 1 tg~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~ 74 (392)
+|+.||.|+|||+. +++....+.+|..+|++++|+|+ +++|++|+.||.|++||+.+++ .+..+..|...|.++
T Consensus 26 tg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v 105 (753)
T 3jro_A 26 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSV 105 (753)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEE
Confidence 47889999999997 66788889999999999999987 8999999999999999999987 777888899999999
Q ss_pred EEecC--CCEEEEEeCCCeEEEEEcCCcee-----eeecccceeEEEEeC-------------CCCEEEEecCCCcEEEE
Q psy17243 75 AVLSD--SRRVVTSDKAGVIAVWVADNAQL-----LYSALGPSKCLTVTH-------------NMKYIVSGDGDNSLRIW 134 (392)
Q Consensus 75 ~~~~~--~~~l~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~-------------~~~~l~~~~~d~~i~~~ 134 (392)
+|+|+ ++.+++++.||.|++||+.++.. ...+...+.++.|+| ++.++++++.||.|++|
T Consensus 106 ~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iw 185 (753)
T 3jro_A 106 QWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 185 (753)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEE
T ss_pred EECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEE
Confidence 99999 99999999999999999987732 234556889999999 58999999999999999
Q ss_pred eCCCCCCC-CcceeeeccccceEEEEEEcC---CCEEEEeeCCCcEEEEEcCCCe-----EEEEEecCCCceeEEEEecC
Q psy17243 135 PTSPQTHK-DDERFTVSHSEEITCFTVTWD---SQYLITGSRDMSLKVWQVVGGK-----LAQVLVGHTDHVSCVAVAVT 205 (392)
Q Consensus 135 d~~~~~~~-~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~~v~~~~~~~~ 205 (392)
|++..... ........|...|.+++|+|+ +++|++++.||.|++||+++++ .......|...|++++|+ +
T Consensus 186 d~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~s-p 264 (753)
T 3jro_A 186 KYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWS-L 264 (753)
T ss_dssp EEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEEC-T
T ss_pred eccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEc-C
Confidence 99865332 223344578999999999999 8999999999999999998864 233334588899999999 6
Q ss_pred CCcEEEEecCCCeEEEEECCCC
Q psy17243 206 NKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 206 ~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
++.++++++.||.|++|++..+
T Consensus 265 dg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 265 SGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp TTCCEEEECSSSCEECCBCCSS
T ss_pred CCCEEEEEcCCCEEEEEecCCC
Confidence 7889999999999999999854
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.3e-29 Score=228.07 Aligned_cols=247 Identities=14% Similarity=0.089 Sum_probs=209.2
Q ss_pred CccCCeEEEEECCCcccee-----eeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEE
Q psy17243 2 GGMDCLVNVWQMNSHELQS-----TMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAV 76 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~ 76 (392)
++.++.|++||+.+++... .+.+|...|.+++|+|+++++++++.|+.|++||+++++.+..+..|...+.+++|
T Consensus 140 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 219 (433)
T 3bws_A 140 LLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLY 219 (433)
T ss_dssp BTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEE
T ss_pred eCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEE
Confidence 5678899999999998877 45679999999999999999999999999999999999999999889999999999
Q ss_pred ecCCCEEEEEe-CCCeEEEEEcCCceeeeecc--cceeEEEEeCCCCEEEEec--------CCCcEEEEeCCCCCCCCcc
Q psy17243 77 LSDSRRVVTSD-KAGVIAVWVADNAQLLYSAL--GPSKCLTVTHNMKYIVSGD--------GDNSLRIWPTSPQTHKDDE 145 (392)
Q Consensus 77 ~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~--------~d~~i~~~d~~~~~~~~~~ 145 (392)
+|+++.+++++ .++.|++||+.+++.+..+. ..+.+++++|+++++++++ .|+.|++||+.+.+.
T Consensus 220 ~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~---- 295 (433)
T 3bws_A 220 DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL---- 295 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE----
T ss_pred cCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE----
Confidence 99999886554 79999999999998876554 3578999999999999988 588999999974422
Q ss_pred eeeeccccceEEEEEEcCCCEE-EEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecC---------
Q psy17243 146 RFTVSHSEEITCFTVTWDSQYL-ITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSK--------- 215 (392)
Q Consensus 146 ~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--------- 215 (392)
.....+...+.+++|+|+++.+ ++++.++.|++||+.+++.+..+. +...+.+++|+ +++.++++++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~ 373 (433)
T 3bws_A 296 IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALS-PDGKYLYVSCRGPNHPTEGY 373 (433)
T ss_dssp EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEEC-TTSSEEEEEECCCCCTTTCT
T ss_pred EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEc-CCCCEEEEEecCCCcccccc
Confidence 2223455688999999999755 566889999999999999888776 67889999999 56666666655
Q ss_pred ------CCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEc
Q psy17243 216 ------DSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 216 ------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
||.|++||+.+++.+..+.. ...+.+++|+|||+++++.
T Consensus 374 ~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 374 LKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp TSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEE
T ss_pred ccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEE
Confidence 57999999999998888875 4578999999999988765
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=1.4e-30 Score=218.07 Aligned_cols=218 Identities=12% Similarity=0.086 Sum_probs=166.3
Q ss_pred cCCeEEEEECCCc---cceeeeccCCc-------------------------CeeEEEecCC----CCeEEEEeC-----
Q psy17243 4 MDCLVNVWQMNSH---ELQSTMEGHLN-------------------------TVSCVAISPN----SIFAVSGSE----- 46 (392)
Q Consensus 4 ~dg~i~vwd~~~~---~~~~~~~~h~~-------------------------~v~~~~~~~~----~~~l~~~~~----- 46 (392)
....|++|+..++ +++++++.|.. .|.+++++|+ ++++++++.
T Consensus 61 ~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~ 140 (356)
T 2w18_A 61 CEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVL 140 (356)
T ss_dssp ESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEE
T ss_pred ccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEE
Confidence 3568999999887 78888877765 4556666777 777776553
Q ss_pred ---------------CCeEEEEeC-CCCceeEEecccccceEEEEEec---CCCEEEEEeCCCeEEEEEcCCceeeeecc
Q psy17243 47 ---------------DNTAKVWGL-TLGSVVSTFKSHQSTILAVAVLS---DSRRVVTSDKAGVIAVWVADNAQLLYSAL 107 (392)
Q Consensus 47 ---------------dg~v~iwd~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 107 (392)
|+.|++|++ .+++.+..+..|...+..++|++ ++..|++++.|++|++||+.+++.++.+.
T Consensus 141 ~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 141 GLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp EETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEc
Confidence 888889988 55888888888888888888888 77899999999999999999999888775
Q ss_pred c------ceeEEEEeCCCCEE------------EEecCCCcEEEEeCCCCCCCCccee--eeccccceEEEEEEcCCCEE
Q psy17243 108 G------PSKCLTVTHNMKYI------------VSGDGDNSLRIWPTSPQTHKDDERF--TVSHSEEITCFTVTWDSQYL 167 (392)
Q Consensus 108 ~------~~~~~~~~~~~~~l------------~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l 167 (392)
+ .+.+++|+|++.++ ++|+.|++|++||..++........ ..+|...+.+..+ ++.++
T Consensus 221 g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~l 298 (356)
T 2w18_A 221 IDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCA 298 (356)
T ss_dssp CCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEE
T ss_pred CCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEE
Confidence 3 34567899999886 5677899999999975433221111 1244444444333 47899
Q ss_pred EEeeCCCcEEEEEcCCCeEEEEEecCCCcee-EEEEecCCCcEEEEecCCCeEEEEEC
Q psy17243 168 ITGSRDMSLKVWQVVGGKLAQVLVGHTDHVS-CVAVAVTNKSLVVSGSKDSNLIVWDM 224 (392)
Q Consensus 168 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~iwd~ 224 (392)
++++.|++|+|||+.+++++..+.+|...+. +++|+ +++.+|++|+.|++|+|||+
T Consensus 299 ASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafS-PDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 299 AAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWS-GTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEEC-SSSSEEEEECTTSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEEC-CCCCEEEEEECCCcEEEecC
Confidence 9999999999999999999999999987665 58999 78899999999999999985
No 123
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=4.5e-30 Score=235.79 Aligned_cols=341 Identities=9% Similarity=0.011 Sum_probs=243.3
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeC--CCCceeEEecccccceEEEEEec-
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGL--TLGSVVSTFKSHQSTILAVAVLS- 78 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~--~~~~~~~~~~~~~~~v~~~~~~~- 78 (392)
++.|++|.+||..+++++.++..+.. +..++|+|++++|++++.|+.|.+||+ .+++.+.++. +...+..++|+|
T Consensus 155 ~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~ 232 (543)
T 1nir_A 155 LRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKF 232 (543)
T ss_dssp EGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCS
T ss_pred EcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCC
Confidence 46789999999999999999984333 889999999999999999999999999 8899988888 455679999999
Q ss_pred ---CCCEEEEEeC-CCeEEEEEcCCceeeeeccc--------------ceeEEEEeCCCCE-EEEecCCCcEEEEeCCCC
Q psy17243 79 ---DSRRVVTSDK-AGVIAVWVADNAQLLYSALG--------------PSKCLTVTHNMKY-IVSGDGDNSLRIWPTSPQ 139 (392)
Q Consensus 79 ---~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~--------------~~~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~ 139 (392)
+++++++++. ++.|.+||..+++++..+.. .+..+.++|++.. +++...++.|.+||+...
T Consensus 233 ~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 233 KGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp TTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS
T ss_pred cCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC
Confidence 9999999884 89999999999988765432 4567889997655 556677899999999754
Q ss_pred CCCCcceeeeccccceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEec----CCCceeEEEEecCCCcEEEEec
Q psy17243 140 THKDDERFTVSHSEEITCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVG----HTDHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 140 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~ 214 (392)
.... .....+...+..+.|+|++++|++++ .+++|.+||+.+++++..+.. |......+ ++|..+.+++++.
T Consensus 313 ~~l~--~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~ 389 (543)
T 1nir_A 313 DNLT--VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSH 389 (543)
T ss_dssp SSCE--EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEB
T ss_pred Ccce--eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEecc
Confidence 3322 11224566788899999999877655 588999999999999888864 54433333 4545577778775
Q ss_pred -CCCeEEEEECCC-------CceeeeecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEec
Q psy17243 215 -KDSNLIVWDMET-------GGEEHFLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRK 286 (392)
Q Consensus 215 -~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (392)
.|++|.+||+.+ .++++++..|...+..+.++|||+.+.++..-... .+.......|...
T Consensus 390 ~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~------------~~~~~~v~v~d~~ 457 (543)
T 1nir_A 390 LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPD------------ARISQSVAVFDLK 457 (543)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSS------------HHHHTCEEEEETT
T ss_pred CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCC------------cccCceEEEEECC
Confidence 689999999998 88999999999899999999999999997521100 0011122333333
Q ss_pred cCCcc-eeEEEeecccccceeEEEeeccccceecceeccCCCCCCChhhhhhhccc----ChHHHHHHhhCCCCCCcccc
Q psy17243 287 YGHLT-SSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQGLGPEQAALAQSQ----HFDQLEALWNKKSPPRSRRF 361 (392)
Q Consensus 287 ~~~~~-~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~~~s~dg~~la~s~----~~d~~i~~Wd~~~~~~~~~~ 361 (392)
.+... ..+.+.... +-.++..+++ +++|+|||++|.++. +.|+.|.|||..+.+....
T Consensus 458 ~~~~~~~~~~v~~~~----------~~~~~~~~~~------~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~- 520 (543)
T 1nir_A 458 NLDAKYQVLPIAEWA----------DLGEGAKRVV------QPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAV- 520 (543)
T ss_dssp CTTSCCEEECHHHHH----------CCCSSCCEEE------EEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEE-
T ss_pred CCCCCeEEeechhhc----------ccCCCCCceE------eccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEe-
Confidence 22211 000000000 0000111122 236999999998552 2579999999998876322
Q ss_pred ccccccccCccccccccCccCCC
Q psy17243 362 EHSMSKQNSYSSRQHSVDTDELS 384 (392)
Q Consensus 362 ~~~~~~~~~~~~~~fspdg~~l~ 384 (392)
+... ...+|+|++-+
T Consensus 521 ---i~~~-----~~~~p~g~~~~ 535 (543)
T 1nir_A 521 ---VKDP-----RLITPTGKFNV 535 (543)
T ss_dssp ---ECCT-----TCCSEEEEEEH
T ss_pred ---ecCC-----CccCCCeeeec
Confidence 2211 13568887643
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=3.2e-29 Score=219.20 Aligned_cols=244 Identities=14% Similarity=0.125 Sum_probs=191.9
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeE-EEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEE
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFA-VSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRV 83 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 83 (392)
+..+++|++++++....... ..+..+++.++++++ ++++.|++|++||+.+++.+..+. +...|.++.|+++. +
T Consensus 39 ~~~~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~ 113 (355)
T 3vu4_A 39 LKSFEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--I 113 (355)
T ss_dssp SSEEEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--E
T ss_pred CCEEEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--E
Confidence 44588999998776655442 358889999988877 567788999999999999999887 67799999998763 4
Q ss_pred EEEeCCCeEEEEEcCCc-eeeeecccceeEEEEeCCCCEEEE--ecCCCcEEEEeCCCCCCC------------Cc-cee
Q psy17243 84 VTSDKAGVIAVWVADNA-QLLYSALGPSKCLTVTHNMKYIVS--GDGDNSLRIWPTSPQTHK------------DD-ERF 147 (392)
Q Consensus 84 ~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~l~~--~~~d~~i~~~d~~~~~~~------------~~-~~~ 147 (392)
+++ .++.|++||+.++ +.+..+..+...+++++ .++++ |+.+|.|++||+...... .. ...
T Consensus 114 ~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (355)
T 3vu4_A 114 VVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVL 190 (355)
T ss_dssp EEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEE
T ss_pred EEE-EcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEE
Confidence 444 4789999999998 66666655566677777 56666 688999999999854310 01 445
Q ss_pred eeccccceEEEEEEcCCCEEEEeeCCCc-EEEEEcCCCeEEEEEe-c-CCCceeEEEEecCCCcEEEEecCCCeEEEEEC
Q psy17243 148 TVSHSEEITCFTVTWDSQYLITGSRDMS-LKVWQVVGGKLAQVLV-G-HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDM 224 (392)
Q Consensus 148 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 224 (392)
..+|...|.+++|+|++++|++++.|++ |++||+++++++..+. + |...|++++|+ +++.+|++++.|+.|++||+
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s-~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWS-TDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEEC-TTSCEEEEEETTCEEEEEES
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEEC-CCCCEEEEEECCCEEEEEEc
Confidence 5689999999999999999999999998 9999999999999998 5 99999999999 68899999999999999999
Q ss_pred CCCcee--eeec---------------------ccccceeEEEEcCCCeEEEEcCC
Q psy17243 225 ETGGEE--HFLA---------------------GHLGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 225 ~~~~~~--~~~~---------------------~~~~~v~~~~~~~dg~~~~~~~~ 257 (392)
+.+... ..+. ........++|++||+.++.+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~ 325 (355)
T 3vu4_A 270 FNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPH 325 (355)
T ss_dssp SCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETT
T ss_pred cCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeC
Confidence 865321 1111 11223477999999998888753
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=4.2e-31 Score=234.37 Aligned_cols=222 Identities=10% Similarity=0.039 Sum_probs=169.2
Q ss_pred CCccCCeEEEEECCCccc-----eeeeccCCcCeeEEEecC--------CCCeEEEEeCCCeEEEEeCCCCceeEEeccc
Q psy17243 1 MGGMDCLVNVWQMNSHEL-----QSTMEGHLNTVSCVAISP--------NSIFAVSGSEDNTAKVWGLTLGSVVSTFKSH 67 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~-----~~~~~~h~~~v~~~~~~~--------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 67 (392)
+|+.|++|++||..+++. +..+.+|.+.|++++|+| ++++||+|+.|++|+|||+.++..+..+..|
T Consensus 106 s~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~ 185 (393)
T 4gq1_A 106 CVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPL 185 (393)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEEC
T ss_pred EEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCC
Confidence 478899999999987754 345789999999999998 7889999999999999999999888888889
Q ss_pred ccceEEEEEecCCC-EEEEEeCCCeEEEEEcCCceeeeec----------------------------ccceeEEEEe-C
Q psy17243 68 QSTILAVAVLSDSR-RVVTSDKAGVIAVWVADNAQLLYSA----------------------------LGPSKCLTVT-H 117 (392)
Q Consensus 68 ~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~----------------------------~~~~~~~~~~-~ 117 (392)
..+|.+++|+|++. +|++++.|+.|++||+.+++..... ...+.++.|. +
T Consensus 186 ~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~ 265 (393)
T 4gq1_A 186 SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGS 265 (393)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETT
T ss_pred CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecC
Confidence 99999999999874 7999999999999999887543221 1234567765 7
Q ss_pred CCCEEEEecCCCcEEEEeCCCCCCCCcceee---------------eccccceEEEEEEc--CCCEEEEeeCCCcEEEEE
Q psy17243 118 NMKYIVSGDGDNSLRIWPTSPQTHKDDERFT---------------VSHSEEITCFTVTW--DSQYLITGSRDMSLKVWQ 180 (392)
Q Consensus 118 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d 180 (392)
+++.+++++.|+.+++||+............ ...........++| ++.++++|+.||.|++||
T Consensus 266 dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd 345 (393)
T 4gq1_A 266 DGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLIN 345 (393)
T ss_dssp TTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEE
Confidence 9999999999999999999754332211100 00111112223443 344677788899999999
Q ss_pred cCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEEC
Q psy17243 181 VVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDM 224 (392)
Q Consensus 181 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 224 (392)
+.++++...+..|..+|.+++|+ +++++|++++.+| +.+|.+
T Consensus 346 ~~~~~~~~~~~~~~~~V~svafs-pdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 346 TYEKDSNSIPIQLGMPIVDFCWH-QDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTCTTCCEEEEECSSCEEEEEEC-TTSSEEEEEESSE-EEEEEE
T ss_pred CCCCcEEEEecCCCCcEEEEEEc-CCCCEEEEEeCCC-eEEEEE
Confidence 99999888888899999999999 7889999998665 666654
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=4.2e-28 Score=215.28 Aligned_cols=232 Identities=16% Similarity=0.108 Sum_probs=192.8
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEE-EEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAV-SGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
++.|+.|++||+.+++.+..+..+. .+.+++|+|++++|+ +++.++.|++||+.+++.+..+.. ...+.+++|+|++
T Consensus 50 ~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg 127 (391)
T 1l0q_A 50 NAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDG 127 (391)
T ss_dssp EGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTS
T ss_pred CCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCC
Confidence 4579999999999999998888655 899999999999775 455679999999999999888874 4578999999999
Q ss_pred CEE-EEEeCCCeEEEEEcCCceeeeecc--cceeEEEEeCCCCEE-EEecCCCcEEEEeCCCCCCCCcceeeeccccceE
Q psy17243 81 RRV-VTSDKAGVIAVWVADNAQLLYSAL--GPSKCLTVTHNMKYI-VSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEIT 156 (392)
Q Consensus 81 ~~l-~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~ 156 (392)
+.+ ++++.++.|++||+.+++.+..+. ..+.+++++|+++++ +++..++.|++||+++... .....+...+.
T Consensus 128 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~~~~~~~~ 203 (391)
T 1l0q_A 128 KKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV----IDTVKVEAAPS 203 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEEECSSEEE
T ss_pred CEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE----EEEEecCCCcc
Confidence 987 677889999999999988766543 456899999999987 5677889999999975422 22234567889
Q ss_pred EEEEEcCCCEEEEee---CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeee
Q psy17243 157 CFTVTWDSQYLITGS---RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 157 ~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 233 (392)
+++|+|++++|++++ .++.|++||+++++.+..+..|. .+.+++|+|.+..++++++.|+.|++||+.+++.+..+
T Consensus 204 ~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 204 GIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 999999999999888 68999999999999988888665 57889999544445578889999999999999999888
Q ss_pred cccccce
Q psy17243 234 AGHLGCV 240 (392)
Q Consensus 234 ~~~~~~v 240 (392)
..+..+.
T Consensus 283 ~~~~~~~ 289 (391)
T 1l0q_A 283 AVGKNPY 289 (391)
T ss_dssp ECSSSEE
T ss_pred ECCcCCC
Confidence 8776553
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.2e-27 Score=200.42 Aligned_cols=238 Identities=13% Similarity=0.088 Sum_probs=162.9
Q ss_pred CccceeeeccCCc----CeeEEEecCCCC---eEEEEeCCCeEEEEeCCCC---ceeEEeccccc---------------
Q psy17243 15 SHELQSTMEGHLN----TVSCVAISPNSI---FAVSGSEDNTAKVWGLTLG---SVVSTFKSHQS--------------- 69 (392)
Q Consensus 15 ~~~~~~~~~~h~~----~v~~~~~~~~~~---~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~--------------- 69 (392)
+.+++.+++...+ .+.++.|-..+- .+++++ ...|++|+..++ +.++++..|+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 102 (356)
T 2w18_A 24 NLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLV 102 (356)
T ss_dssp CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCE
T ss_pred eeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCccccee
Confidence 3455666665433 245565644332 566666 468999999998 77777776664
Q ss_pred ----------ceEEEEEecC----CCEEEEEeC--------------------CCeEEEEEcC-Cceeeee---ccccee
Q psy17243 70 ----------TILAVAVLSD----SRRVVTSDK--------------------AGVIAVWVAD-NAQLLYS---ALGPSK 111 (392)
Q Consensus 70 ----------~v~~~~~~~~----~~~l~~~~~--------------------d~~i~iwd~~-~~~~~~~---~~~~~~ 111 (392)
.|.+++++|+ ++.+++++. |+.|++|++. +++.+.. +...+.
T Consensus 103 ~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~ 182 (356)
T 2w18_A 103 CVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEET 182 (356)
T ss_dssp EEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSC
T ss_pred eeeeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCcee
Confidence 4566667777 777776553 7777777773 3555433 334566
Q ss_pred EEEEeC---CCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEE------------EEeeCCCcE
Q psy17243 112 CLTVTH---NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYL------------ITGSRDMSL 176 (392)
Q Consensus 112 ~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l------------~~~~~dg~i 176 (392)
.++|++ ++..|++++.|++|++||+.+++....+.....+...+.+++|+|++.++ ++|+.|++|
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tI 262 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQL 262 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEE
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEE
Confidence 777777 77899999999999999998654332221111123467888999999876 567789999
Q ss_pred EEEEcCCCeEEEEE-----ecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccccccee-EEEEcCCCe
Q psy17243 177 KVWQVVGGKLAQVL-----VGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVT-CVKLAGDGT 250 (392)
Q Consensus 177 ~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~dg~ 250 (392)
++||..+++.+..+ .+|...+.+..++ +.++++++.|++|+|||+.+++++.++.+|...+. .++|+|||+
T Consensus 263 klWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~ 339 (356)
T 2w18_A 263 IVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDS 339 (356)
T ss_dssp EEEETTTTEEEEEEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSS
T ss_pred EEEECCCCEEEEEEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCC
Confidence 99999999987765 3666555444443 77899999999999999999999999999987655 689999999
Q ss_pred EEEEcC
Q psy17243 251 VAMSDL 256 (392)
Q Consensus 251 ~~~~~~ 256 (392)
+++++.
T Consensus 340 ~LaSGS 345 (356)
T 2w18_A 340 HLLAGQ 345 (356)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 888764
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=2.2e-26 Score=205.26 Aligned_cols=234 Identities=14% Similarity=0.044 Sum_probs=188.4
Q ss_pred CeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCC---eEEEEeCCCCceeEEecccccceEEEEEecCCCE
Q psy17243 6 CLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDN---TAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRR 82 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 82 (392)
+.|++||+. +.....+.+|...|.+++|+|+|++|++++.++ .|++||+++++.. .+..|...+.+++|+|+++.
T Consensus 159 ~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~ 236 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSK 236 (415)
T ss_dssp EEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSE
T ss_pred ceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCE
Confidence 799999997 455677888999999999999999999999875 9999999998875 45568889999999999998
Q ss_pred EE-EEeCCC--eEEEEEcCCceeee--ecccceeEEEEeCCCCEEEEecC-CC--cEEEEeCCCCCCCCcceeeeccccc
Q psy17243 83 VV-TSDKAG--VIAVWVADNAQLLY--SALGPSKCLTVTHNMKYIVSGDG-DN--SLRIWPTSPQTHKDDERFTVSHSEE 154 (392)
Q Consensus 83 l~-~~~~d~--~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~ 154 (392)
|+ +++.++ .|++||+.+++... .....+.++.|+|++++|++++. ++ .|.+||+.+.. ......+...
T Consensus 237 la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~----~~~l~~~~~~ 312 (415)
T 2hqs_A 237 LAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA----PQRITWEGSQ 312 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC----CEECCCSSSE
T ss_pred EEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC----EEEEecCCCc
Confidence 88 566555 49999998876533 33456789999999999988876 44 67777886443 1222345677
Q ss_pred eEEEEEEcCCCEEEEeeCC---CcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCC---eEEEEECCCCc
Q psy17243 155 ITCFTVTWDSQYLITGSRD---MSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDS---NLIVWDMETGG 228 (392)
Q Consensus 155 v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~ 228 (392)
+.+++|+|++++|++++.+ ..|++||+.+++.. .+..+. .+.+++|+ +++.+|+.++.++ .|++||+. ++
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~s-pdg~~l~~~s~~~~~~~l~~~d~~-g~ 388 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLA-PNGTMVIYSSSQGMGSVLNLVSTD-GR 388 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEEC-TTSSEEEEEEEETTEEEEEEEETT-SC
T ss_pred ccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEc-CCCCEEEEEEcCCCccEEEEEECC-CC
Confidence 8899999999999988764 58999999988764 455554 88999999 6677777777666 79999987 66
Q ss_pred eeeeecccccceeEEEEcCCC
Q psy17243 229 EEHFLAGHLGCVTCVKLAGDG 249 (392)
Q Consensus 229 ~~~~~~~~~~~v~~~~~~~dg 249 (392)
....+..|.+.|.+++|+|.-
T Consensus 389 ~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 389 FKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp CEEECCCSSSEEEEEEECCCC
T ss_pred cEEEeeCCCCCCcCCcccccc
Confidence 677888999999999999864
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=5.2e-27 Score=199.78 Aligned_cols=251 Identities=16% Similarity=0.114 Sum_probs=194.7
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCC-CceeEEeccc-ccceEEEEEecC
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTL-GSVVSTFKSH-QSTILAVAVLSD 79 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~-~~~v~~~~~~~~ 79 (392)
++.|+.|++||+.+++.. .+..|...|.+++|+|++++|++++ ++.|.+||+++ ++.......+ ...+.+++|+|+
T Consensus 18 ~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 567899999999988766 4555899999999999999999986 78999999999 8877666655 367899999999
Q ss_pred CCEEEEEeC--CC--eEEEEEcCCceeee-ecccceeEEEEeCCCCEEE-EecCCCcEEEEeCCCCCCCCcceeeecccc
Q psy17243 80 SRRVVTSDK--AG--VIAVWVADNAQLLY-SALGPSKCLTVTHNMKYIV-SGDGDNSLRIWPTSPQTHKDDERFTVSHSE 153 (392)
Q Consensus 80 ~~~l~~~~~--d~--~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 153 (392)
+++|++++. ++ .|..+++.+++... .....+..+.|+|+++.++ ++..++.+++|++.... ........+..
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~ 173 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS--GVETRLTHGEG 173 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT--CCEEECCCSSS
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCC--CcceEcccCCC
Confidence 999999983 34 44555555554322 2233577889999999887 67788999999865322 12233345677
Q ss_pred ceEEEEEEcCCCEEEEee-CCCcEEEEEcC-CCeEEEEEecCCCceeEEEEecCCCcEEEEecCC-----------CeEE
Q psy17243 154 EITCFTVTWDSQYLITGS-RDMSLKVWQVV-GGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKD-----------SNLI 220 (392)
Q Consensus 154 ~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----------g~i~ 220 (392)
.+.+++|+|++++|++++ .++.+.+|++. .+.....+..|...+..++|+ +++.+|+.++.+ +.|+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPS-PSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEEC-TTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEEC-CCCCEEEEEEcCCCCCcccccCceEEE
Confidence 899999999999887766 58899999986 556667777788889999999 567777666654 5699
Q ss_pred EEECCCCcee--eeecccccceeEEEEcCCCeEEEEcCC
Q psy17243 221 VWDMETGGEE--HFLAGHLGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 221 iwd~~~~~~~--~~~~~~~~~v~~~~~~~dg~~~~~~~~ 257 (392)
+||+.+++.. ..+.+|...+..++|+|||+.+++...
T Consensus 253 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 253 LMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred EEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 9999987653 344577889999999999998887653
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=7e-28 Score=231.44 Aligned_cols=308 Identities=11% Similarity=0.070 Sum_probs=213.1
Q ss_pred CcCeeEEEecCCCCeEEEEeC-CC-----eEEEEeCCCCceeEEeccccc------------------------ceEEEE
Q psy17243 26 LNTVSCVAISPNSIFAVSGSE-DN-----TAKVWGLTLGSVVSTFKSHQS------------------------TILAVA 75 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~-dg-----~v~iwd~~~~~~~~~~~~~~~------------------------~v~~~~ 75 (392)
...+.+++|+|||++|++++. |+ .|.+||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999988 88 899999999988777765433 378999
Q ss_pred EecCCCEEEEEeCCCeEEEEEcCCc---eee--eecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeec
Q psy17243 76 VLSDSRRVVTSDKAGVIAVWVADNA---QLL--YSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVS 150 (392)
Q Consensus 76 ~~~~~~~l~~~~~d~~i~iwd~~~~---~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 150 (392)
|+|||++|++++. +.|++||+.++ +.. ......+..++|+|+|++|+.++. +.|++||+.++... .....
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~---~~~~~ 190 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQM---QLTAD 190 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEE---ECCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEE---EeccC
Confidence 9999999999887 99999999987 432 233456889999999999998874 68999999754321 11111
Q ss_pred ccc----------------ceEEEEEEcCCCEEEEeeCCC---------------------------------cEEEEEc
Q psy17243 151 HSE----------------EITCFTVTWDSQYLITGSRDM---------------------------------SLKVWQV 181 (392)
Q Consensus 151 ~~~----------------~v~~~~~~~~~~~l~~~~~dg---------------------------------~i~i~d~ 181 (392)
+.. .+..++|+|||++|++++.|+ .|++||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 221 147799999999999987665 7899999
Q ss_pred CC-CeEEEEEe--cCCCceeEEEEecCCCcEEEEec----CCCeEEEEECCCCceeeeeccccc----ceeEEEEcCCCe
Q psy17243 182 VG-GKLAQVLV--GHTDHVSCVAVAVTNKSLVVSGS----KDSNLIVWDMETGGEEHFLAGHLG----CVTCVKLAGDGT 250 (392)
Q Consensus 182 ~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~----~v~~~~~~~dg~ 250 (392)
.+ ++...... .|...+..++| |++..+++++. .+..|++||+.+++....+..+.. .+..++|+|||+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~ 349 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS 349 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC
T ss_pred CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe
Confidence 88 77654433 36778999999 65544443332 357899999999988776665543 456899999999
Q ss_pred EEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEeeccccceecceeccCCCC-C
Q psy17243 251 VAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQ-G 329 (392)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~-~ 329 (392)
+++++..++. ...+.+... +. .. .++.. +..+ ... .
T Consensus 350 ~~~~~~~~g~-----------------~~l~~~~~~-~~-~~---------------~l~~~-~~~v--------~~~~~ 386 (741)
T 2ecf_A 350 ILWSSERTGF-----------------QHLYRIDSK-GK-AA---------------ALTHG-NWSV--------DELLA 386 (741)
T ss_dssp EEEEECTTSS-----------------CEEEEECSS-SC-EE---------------ESCCS-SSCE--------EEEEE
T ss_pred EEEEecCCCc-----------------cEEEEEcCC-CC-ee---------------eeeec-ceEE--------EeEeE
Confidence 7777543211 111111110 00 00 00000 0000 011 3
Q ss_pred CChhhhhhhcccChHH--HHHHhhCCC-CCCccccccccccccCccccccccCccCCCCc
Q psy17243 330 LGPEQAALAQSQHFDQ--LEALWNKKS-PPRSRRFEHSMSKQNSYSSRQHSVDTDELSSP 386 (392)
Q Consensus 330 ~s~dg~~la~s~~~d~--~i~~Wd~~~-~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~ 386 (392)
|+|||+.|+++++.|+ .++||++.. +..+.. +.....+..++|||||++|+..
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~----l~~~~~~~~~~~spdg~~l~~~ 442 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQPQR----LSKAPGMHSASFARNASVYVDS 442 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEETTCCCCEE----CCCSCSEEEEEECTTSSEEEEE
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeee----cccCCCceEEEECCCCCEEEEE
Confidence 8899998876777776 789999864 333332 2223334568999999998844
No 131
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=3.6e-28 Score=232.86 Aligned_cols=317 Identities=11% Similarity=0.010 Sum_probs=212.1
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEeccccc---ceEEEEEecCCCEEEEEeCC---------CeEEE
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQS---TILAVAVLSDSRRVVTSDKA---------GVIAV 94 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------~~i~i 94 (392)
..+.+++|+|+|+++++ +.||+|++||+.+++....+..|.. .|.+++|+|||++|++++.+ +.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 34778999999997766 7899999999999998888876664 49999999999999999764 78889
Q ss_pred EEcCCcee--eeeccc---ceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeecccc----------------
Q psy17243 95 WVADNAQL--LYSALG---PSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSE---------------- 153 (392)
Q Consensus 95 wd~~~~~~--~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~---------------- 153 (392)
||+.+++. +..... .+..++|+|+|+.|+.++. +.|++||+.++.. ......+..
T Consensus 96 ~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~---~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA---IRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC---EEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce---EEEecCCCCCceECcccceeEEEEe
Confidence 99998875 222222 2678999999999999886 7899999975432 222222222
Q ss_pred --ceEEEEEEcCCCEEEEeeCCC----------------------------------cEEEEEcCCCeEEEEEecC----
Q psy17243 154 --EITCFTVTWDSQYLITGSRDM----------------------------------SLKVWQVVGGKLAQVLVGH---- 193 (392)
Q Consensus 154 --~v~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~~~~~~~~---- 193 (392)
.+.+++|+|||++|++++.++ .|++||+.+++....+..+
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 237899999999999887543 7999999988765666544
Q ss_pred --CCceeEEEEecCCCcEEEEec----CCCeEEEEECCCCceeeeeccc-ccce----eEEEEcCCCeEEEEc-C-CCCC
Q psy17243 194 --TDHVSCVAVAVTNKSLVVSGS----KDSNLIVWDMETGGEEHFLAGH-LGCV----TCVKLAGDGTVAMSD-L-PPSR 260 (392)
Q Consensus 194 --~~~v~~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~-~~~v----~~~~~~~dg~~~~~~-~-~~~~ 260 (392)
...+..++|+ ++++++++.. .+..|++||+.+++....+..+ ...+ ..++|+|||+.+++. . .+..
T Consensus 252 ~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 252 MREYYITMVKWA-TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG 330 (723)
T ss_dssp GSSEEEEEEEES-SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred CccceeEEEEEe-CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC
Confidence 5678899999 5677776654 2357999999999876655433 3334 378999999977653 2 1110
Q ss_pred CCCCCCccccccccccccceeEEE-eccCCc--ceeEEEeecccccceeEEEeeccccceecceeccCCCCCCChhhhhh
Q psy17243 261 PAGPKRPLRRLLKKEVSLDTYTWQ-RKYGHL--TSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQGLGPEQAAL 337 (392)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~~~s~dg~~l 337 (392)
. ......+.|. ...+.. .. .++... |. .....+|||||+.|
T Consensus 331 ~-------------~~~~~l~~~d~~~~~~~~~~~---------------~l~~~~------~~--~~~~~~~spdg~~l 374 (723)
T 1xfd_A 331 R-------------GKFYHITVSSSQPNSSNDNIQ---------------SITSGD------WD--VTKILAYDEKGNKI 374 (723)
T ss_dssp S-------------SCEEEEEEECSSCCSSSCCCC---------------BSCCSS------SC--EEEEEEEETTTTEE
T ss_pred C-------------cceeEEEEEeccCCCCcccee---------------EeecCC------eE--EEeeeEEcCCCCEE
Confidence 0 0001122222 010100 00 000000 00 00012589999999
Q ss_pred hcccChH--HHHHHhhCCCCC--CccccccccccccCccccccccCccCCCC
Q psy17243 338 AQSQHFD--QLEALWNKKSPP--RSRRFEHSMSKQNSYSSRQHSVDTDELSS 385 (392)
Q Consensus 338 a~s~~~d--~~i~~Wd~~~~~--~~~~~~~~~~~~~~~~~~~fspdg~~l~~ 385 (392)
++++..+ +.++||++.... ....+...+.+...+..++|||||++|+.
T Consensus 375 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 375 YFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp EEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred EEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 8666666 789999986543 22222111112344666899999998873
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=1.1e-26 Score=213.45 Aligned_cols=310 Identities=8% Similarity=0.014 Sum_probs=212.0
Q ss_pred EecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEc--CCceeeeecc--c
Q psy17243 33 AISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVA--DNAQLLYSAL--G 108 (392)
Q Consensus 33 ~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~--~~~~~~~~~~--~ 108 (392)
.++|++.++++++.|++|.+||..+++++.++..+.. +..++|+|++++|++++.++.|.+||+ .+++.+..+. .
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC
Confidence 3889999999999999999999999999999984333 889999999999999999999999999 7887766544 3
Q ss_pred ceeEEEEeC----CCCEEEEecC-CCcEEEEeCCCCCCCCcceeee--------ccccceEEEEEEcCCCE-EEEeeCCC
Q psy17243 109 PSKCLTVTH----NMKYIVSGDG-DNSLRIWPTSPQTHKDDERFTV--------SHSEEITCFTVTWDSQY-LITGSRDM 174 (392)
Q Consensus 109 ~~~~~~~~~----~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~-l~~~~~dg 174 (392)
....++++| +++++++++. ++.|.+||..+.+....+.... .....+..+.++|++.. +++...++
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 567899999 9999999885 8999999987544332222110 01237889999997654 56667789
Q ss_pred cEEEEEcCCCeEEE--EEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc----cccceeEEEEcCC
Q psy17243 175 SLKVWQVVGGKLAQ--VLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG----HLGCVTCVKLAGD 248 (392)
Q Consensus 175 ~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~d 248 (392)
.|.+||..+.+.+. .+. +...+..++|+|.+..+++++..+++|.+||+.+++++..+.. |.+....+ ++|+
T Consensus 303 ~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~ 380 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPK 380 (543)
T ss_dssp EEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETT
T ss_pred eEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCC
Confidence 99999998765443 333 5667888999954444556666789999999999998887764 54433333 4666
Q ss_pred -CeEEEEcC-CCCCCCCCCCccccccccccccceeEEEecc-CCcceeEEEeecccccceeEEEeeccccceecceeccC
Q psy17243 249 -GTVAMSDL-PPSRPAGPKRPLRRLLKKEVSLDTYTWQRKY-GHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNV 325 (392)
Q Consensus 249 -g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~ 325 (392)
|.++++.. .+. . ...|.... +|.... -..++.......
T Consensus 381 ~g~~~~s~~~~d~-----------------~--V~v~d~~~~~~~~~~--------------------~~~v~~l~~~g~ 421 (543)
T 1nir_A 381 YGPVWSTSHLGDG-----------------S--ISLIGTDPKNHPQYA--------------------WKKVAELQGQGG 421 (543)
T ss_dssp TEEEEEEEBSSSS-----------------E--EEEEECCTTTCTTTB--------------------TSEEEEEECSCS
T ss_pred CccEEEeccCCCc-----------------e--EEEEEeCCCCCchhc--------------------CeEEEEEEcCCC
Confidence 66666542 110 0 11111111 000000 000000111111
Q ss_pred C--CCCCChhhhhhhcccC-------hHHHHHHhhCCCCCCcccccc------ccccccCccccccccCccCCCC
Q psy17243 326 G--SQGLGPEQAALAQSQH-------FDQLEALWNKKSPPRSRRFEH------SMSKQNSYSSRQHSVDTDELSS 385 (392)
Q Consensus 326 ~--~~~~s~dg~~la~s~~-------~d~~i~~Wd~~~~~~~~~~~~------~~~~~~~~~~~~fspdg~~l~~ 385 (392)
+ .++|+|||++|+ +++ .+++|+|||+.+.+....... .-....++..++|+|||+.|..
T Consensus 422 ~~~~v~~~pdg~~l~-v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 495 (543)
T 1nir_A 422 GSLFIKTHPKSSHLY-VDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWF 495 (543)
T ss_dssp CCCCEECCTTCCEEE-ECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEE
T ss_pred CceEEEcCCCCCcEE-EecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEE
Confidence 1 227999999999 444 378999999998887422110 0122455777999999998873
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=2.7e-26 Score=204.62 Aligned_cols=241 Identities=13% Similarity=0.051 Sum_probs=189.8
Q ss_pred eEEEEEC--CCccce--eeeccCCcCeeEEEecC--------------CCCeEEEEeCC------CeEEEEeCCCCceeE
Q psy17243 7 LVNVWQM--NSHELQ--STMEGHLNTVSCVAISP--------------NSIFAVSGSED------NTAKVWGLTLGSVVS 62 (392)
Q Consensus 7 ~i~vwd~--~~~~~~--~~~~~h~~~v~~~~~~~--------------~~~~l~~~~~d------g~v~iwd~~~~~~~~ 62 (392)
.|++||+ .+++.+ ..+.+|...+..+++++ .+..++.++.+ +.|++||++ +....
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~ 172 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQF 172 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCE
Confidence 9999999 888877 55888999898888875 15566666554 799999997 45567
Q ss_pred EecccccceEEEEEecCCCEEEEEeCCC---eEEEEEcCCceeee--ecccceeEEEEeCCCCEEE-EecCCCc--EEEE
Q psy17243 63 TFKSHQSTILAVAVLSDSRRVVTSDKAG---VIAVWVADNAQLLY--SALGPSKCLTVTHNMKYIV-SGDGDNS--LRIW 134 (392)
Q Consensus 63 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~l~-~~~~d~~--i~~~ 134 (392)
.+..|...+.+++|+|++++|++++.++ .|++||+.+++... .+...+.+++|+|+++.|+ +++.++. |++|
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~ 252 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM 252 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEE
Confidence 7778999999999999999999999885 99999999887643 3455788999999999888 5655554 9999
Q ss_pred eCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC-CC--cEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEE
Q psy17243 135 PTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR-DM--SLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVV 211 (392)
Q Consensus 135 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 211 (392)
|+.+... .....+...+.+++|+|++++|++++. ++ .|++||+.+++. ..+..+...+..++|+ +++++|+
T Consensus 253 d~~~~~~----~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s-pdG~~l~ 326 (415)
T 2hqs_A 253 DLASGQI----RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVS-SDGKFMV 326 (415)
T ss_dssp ETTTCCE----EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEEC-TTSSEEE
T ss_pred ECCCCCE----EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEEC-CCCCEEE
Confidence 9975432 333457788999999999999888876 44 688889887764 4455577788999999 5667776
Q ss_pred EecCC---CeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 212 SGSKD---SNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 212 ~~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.++.+ ..|++||+.+++.. .+..+. .+.+++|+|||+.+++..
T Consensus 327 ~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s 372 (415)
T 2hqs_A 327 MVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSS 372 (415)
T ss_dssp EEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEE
T ss_pred EEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEE
Confidence 66653 58999999988764 455554 899999999999888864
No 134
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=9.2e-27 Score=231.06 Aligned_cols=352 Identities=9% Similarity=-0.006 Sum_probs=236.4
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCC------CeEEEEeCCCCceeEEecccccce-------
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSED------NTAKVWGLTLGSVVSTFKSHQSTI------- 71 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~v------- 71 (392)
++.|++|++.+++ ...+..|...+.+++|||||++||+++.+ ..|.+|++.+++ ...+..|...+
T Consensus 32 ~~~l~~~~~~gg~-~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~ 109 (1045)
T 1k32_A 32 CDDLWEHDLKSGS-TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFT 109 (1045)
T ss_dssp TTEEEEEETTTCC-EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECS
T ss_pred CCcEEEEECCCCc-EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCccccccccc
Confidence 3689999998765 45677899999999999999999987643 479999998876 56777788888
Q ss_pred EEEEEecCCCEEEEEeCC------CeEEEEEcCCceeeeecccceeEEEEeCCCCEEEEecC------------CCcEEE
Q psy17243 72 LAVAVLSDSRRVVTSDKA------GVIAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDG------------DNSLRI 133 (392)
Q Consensus 72 ~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------d~~i~~ 133 (392)
..++|+|||+.+++++.+ ..|..|++.+++.......+...+.|+| | +++++.. +....+
T Consensus 110 ~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~l 187 (1045)
T 1k32_A 110 DVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKI 187 (1045)
T ss_dssp EEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEE
T ss_pred ccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCC-C-EEEEeccCCCccccccccCCCcCCE
Confidence 999999999977777644 4688889888876554445566778999 7 8877642 234556
Q ss_pred EeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCC-CeEEEEEecCCCceeEEEEecCCCcEEEE
Q psy17243 134 WPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVG-GKLAQVLVGHTDHVSCVAVAVTNKSLVVS 212 (392)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 212 (392)
|..... ........|...+.++.|+++ .++++++.++.+.+|.+.. +.....+..|. .+...+|+ +++..|+.
T Consensus 188 w~~~~~---~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~S-pDG~~la~ 261 (1045)
T 1k32_A 188 WIEVNS---GAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLN-TDGRRILF 261 (1045)
T ss_dssp EEEEET---TEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEE-ESSSCEEE
T ss_pred EEECCC---CCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEc-CCCCEEEE
Confidence 643321 222233678899999999988 6777788889999998753 44455555554 46677999 56666666
Q ss_pred ecCCCeEEEEECCCCceeeeecc-----------cccceeEEEEc-CCCeEEEEcCCCCCCCCCCCccccccccccccce
Q psy17243 213 GSKDSNLIVWDMETGGEEHFLAG-----------HLGCVTCVKLA-GDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDT 280 (392)
Q Consensus 213 ~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~-~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (392)
+ .++.|++||+... .+..+.. |...+.+++|+ |||+.+++.... . +..........
T Consensus 262 ~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~-~-------i~~~~~~~~~~-- 329 (1045)
T 1k32_A 262 S-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRG-Q-------AFIQDVSGTYV-- 329 (1045)
T ss_dssp E-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETT-E-------EEEECTTSSBE--
T ss_pred E-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEEEcC-E-------EEEEcCCCCce--
Confidence 6 4899999999543 3445544 34579999999 999988876411 0 00000000000
Q ss_pred eEEEeccCCcceeEEEeecccccceeEEEeecccccee-cceec------cCCC------CCCChhhhhhhcccChHHHH
Q psy17243 281 YTWQRKYGHLTSSIMMAAVDERLKRRFSVSASMEEISK-IPIKD------NVGS------QGLGPEQAALAQSQHFDQLE 347 (392)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~-~~~~~------~~~~------~~~s~dg~~la~s~~~d~~i 347 (392)
.....+.. ......... +++.++.++.+..+. +|... ..++ .+|||||++|| +++.|+.|
T Consensus 330 ---~~~~~~~~--~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la-~~~~~~~v 402 (1045)
T 1k32_A 330 ---LKVPEPLR--IRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAV-VANDRFEI 402 (1045)
T ss_dssp ---EECSCCSC--EEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEE-EEETTSEE
T ss_pred ---EEccCCCc--ceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEE-EECCCCeE
Confidence 00111111 011222333 566666666655444 44321 1122 28999999999 77888999
Q ss_pred HHhhCCCCCCccccccccccccCccccccccCccCCCCccc
Q psy17243 348 ALWNKKSPPRSRRFEHSMSKQNSYSSRQHSVDTDELSSPVD 388 (392)
Q Consensus 348 ~~Wd~~~~~~~~~~~~~~~~~~~~~~~~fspdg~~l~~~~~ 388 (392)
++||+.+++.... .. .+...+..++|||||++||+++.
T Consensus 403 ~~~d~~tg~~~~~-~~--~~~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 403 MTVDLETGKPTVI-ER--SREAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp EEEETTTCCEEEE-EE--CSSSCCCCEEECTTSCEEEEEEE
T ss_pred EEEECCCCceEEe-cc--CCCCCccceEECCCCCeEEEEec
Confidence 9999988765221 11 23445667999999999986654
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=7e-25 Score=189.99 Aligned_cols=251 Identities=12% Similarity=0.058 Sum_probs=189.0
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeC-CCeEEEEeCCCCce-eEEecccccceEEEEEecC
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSE-DNTAKVWGLTLGSV-VSTFKSHQSTILAVAVLSD 79 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-dg~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~ 79 (392)
++.++.|.+||..+++....+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..+..+..+++|+|+
T Consensus 16 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d 94 (331)
T 3u4y_A 16 EQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPD 94 (331)
T ss_dssp EGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTT
T ss_pred ecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCC
Confidence 4678999999999999988887777777 9999999997766655 89999999999987 7777766666666999999
Q ss_pred CCEEEEEeCCC---eEEEEEcCCceeeeecc--cceeEEEEeCCCCEEEEe-cCCCc-EEEEeCCCCCCCCcc-eeeecc
Q psy17243 80 SRRVVTSDKAG---VIAVWVADNAQLLYSAL--GPSKCLTVTHNMKYIVSG-DGDNS-LRIWPTSPQTHKDDE-RFTVSH 151 (392)
Q Consensus 80 ~~~l~~~~~d~---~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~-~~d~~-i~~~d~~~~~~~~~~-~~~~~~ 151 (392)
++++++...++ .|.+||+.+++.+.... ....+++|+|++++++++ ..++. |.+|++......... ......
T Consensus 95 g~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~ 174 (331)
T 3u4y_A 95 DQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG 174 (331)
T ss_dssp SSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS
T ss_pred CCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC
Confidence 99999555553 89999999998766543 356799999999866655 45588 999998743222111 112234
Q ss_pred ccceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCeE---EEEEecCCCceeEEEEecCCCc-EEEEecCCCeEEEEECCC
Q psy17243 152 SEEITCFTVTWDSQYLITGS-RDMSLKVWQVVGGKL---AQVLVGHTDHVSCVAVAVTNKS-LVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 152 ~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~ 226 (392)
......++|+|+++++++++ .++.|.+||+.+++. +..+.. ...+..++|+ ++++ ++++...++.|.+||+.+
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~s-pdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVS-RDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEEC-TTSSEEEEECSSEEEEEEEETTT
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEEC-CCCCEEEEEEcCCCEEEEEECCC
Confidence 55679999999999665554 688999999998887 777764 4667889999 5555 445555688999999998
Q ss_pred Cce--eeeeccc----cc---ceeEEEEcCCCeEEEEc
Q psy17243 227 GGE--EHFLAGH----LG---CVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 227 ~~~--~~~~~~~----~~---~v~~~~~~~dg~~~~~~ 255 (392)
++. +..+..+ .. ....++|+|||+.++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 290 (331)
T 3u4y_A 253 GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFIS 290 (331)
T ss_dssp TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEE
T ss_pred CceeeecccccccccCCCCcccccceEECCCCCEEEEe
Confidence 876 3333222 22 23568999999987654
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.2e-25 Score=215.99 Aligned_cols=243 Identities=8% Similarity=-0.002 Sum_probs=189.0
Q ss_pred eEEEEECCCccceeeeccCCc------------------------CeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc--e
Q psy17243 7 LVNVWQMNSHELQSTMEGHLN------------------------TVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS--V 60 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~h~~------------------------~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~ 60 (392)
.|++||+.+++....+..+.. .|.+++|+|||++|++++. +.|.+||+.++. .
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~ 143 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA 143 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcce
Confidence 899999999987777665433 3899999999999999886 999999999883 4
Q ss_pred eEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeecccc-------------------eeEEEEeCCCCE
Q psy17243 61 VSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSALGP-------------------SKCLTVTHNMKY 121 (392)
Q Consensus 61 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------------------~~~~~~~~~~~~ 121 (392)
...+..+...+..++|+|||++|+.++ ++.|++||+.+++........ +..+.|+|++++
T Consensus 144 ~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~ 222 (741)
T 2ecf_A 144 VRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA 222 (741)
T ss_dssp CCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC
T ss_pred EEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCE
Confidence 455666888899999999999999887 468999999988765433221 367999999999
Q ss_pred EEEecCCC---------------------------------cEEEEeCCC-CCCCCcceeeeccccceEEEEEEcCCCEE
Q psy17243 122 IVSGDGDN---------------------------------SLRIWPTSP-QTHKDDERFTVSHSEEITCFTVTWDSQYL 167 (392)
Q Consensus 122 l~~~~~d~---------------------------------~i~~~d~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 167 (392)
|++++.|+ .|.+||+.+ ..... ......+...+..++| ||+++|
T Consensus 223 l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~-pDg~~l 300 (741)
T 2ecf_A 223 IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQW-IDLGKEQDIYLARVNW-RDPQHL 300 (741)
T ss_dssp EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEE-ECCCSCSSEEEEEEEE-EETTEE
T ss_pred EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEE-ecCCCCcceEEEEEEe-CCCCEE
Confidence 99987765 788889875 43211 1111146678999999 999999
Q ss_pred EEeeC-----CCcEEEEEcCCCeEEEEEecCCC----ceeEEEEecCCCcEEEEecCCCeEEEEECC-CCceeeeecccc
Q psy17243 168 ITGSR-----DMSLKVWQVVGGKLAQVLVGHTD----HVSCVAVAVTNKSLVVSGSKDSNLIVWDME-TGGEEHFLAGHL 237 (392)
Q Consensus 168 ~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~ 237 (392)
++++. +..|++||+.+++....+..+.. .+..++|+ ++++++++++.||.++||.++ +++ ...+..+.
T Consensus 301 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s-pdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~ 378 (741)
T 2ecf_A 301 SFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL-DDGSILWSSERTGFQHLYRIDSKGK-AAALTHGN 378 (741)
T ss_dssp EEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC-TTSCEEEEECTTSSCEEEEECSSSC-EEESCCSS
T ss_pred EEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC-CCCeEEEEecCCCccEEEEEcCCCC-eeeeeecc
Confidence 87654 56899999999988777765543 45688999 566688999999988888765 345 77777788
Q ss_pred cceeEE-EEcCCCeEEEEc
Q psy17243 238 GCVTCV-KLAGDGTVAMSD 255 (392)
Q Consensus 238 ~~v~~~-~~~~dg~~~~~~ 255 (392)
..+..+ .|+|||+.++..
T Consensus 379 ~~v~~~~~~s~dg~~l~~~ 397 (741)
T 2ecf_A 379 WSVDELLAVDEKAGLAYFR 397 (741)
T ss_dssp SCEEEEEEEETTTTEEEEE
T ss_pred eEEEeEeEEeCCCCEEEEE
Confidence 888887 599999876543
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=5.2e-24 Score=186.16 Aligned_cols=248 Identities=12% Similarity=0.051 Sum_probs=196.0
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEE-EEeCCCeEEEEeCCCCceeEEecccccc---------eEEE
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAV-SGSEDNTAKVWGLTLGSVVSTFKSHQST---------ILAV 74 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~~---------v~~~ 74 (392)
++.|.+||..+++.+..+.. ...+..++|+|++++++ +...++.|.+||.++++.+..+..+... +.++
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPREL 146 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEE
T ss_pred CccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceE
Confidence 78999999999998888874 45578999999998555 4556799999999999998888754322 7889
Q ss_pred EEecCCCEEEEEe--CCCeEEEEEcCCceeeeecc---cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeee
Q psy17243 75 AVLSDSRRVVTSD--KAGVIAVWVADNAQLLYSAL---GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTV 149 (392)
Q Consensus 75 ~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 149 (392)
+|+|+++++++++ .++.|.+||+.+++.+.... .....+.++|+++++++++.++.|.+||..+.+.........
T Consensus 147 ~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~ 226 (353)
T 3vgz_A 147 VADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLD 226 (353)
T ss_dssp EEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCC
T ss_pred EECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCC
Confidence 9999999888776 47899999999998877654 246789999999999999999999999997543332222111
Q ss_pred -ccccceEEEEEEcCCCEEEEeeC-CCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCC
Q psy17243 150 -SHSEEITCFTVTWDSQYLITGSR-DMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 150 -~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
.+...+..++|+|+++++++++. ++.|.+||+.+++.+..+.... ...++|+|.+..++++...++.|.+||..++
T Consensus 227 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 227 DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 24556788999999998777765 4999999999999888776543 2578999554446666667999999999999
Q ss_pred ceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 228 GEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 228 ~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+.+..+... ..+.+++|+|||+.++...
T Consensus 305 ~~~~~~~~~-~~~~~~~~s~dg~~l~v~~ 332 (353)
T 3vgz_A 305 KVVKTFDTP-THPNSLALSADGKTLYVSV 332 (353)
T ss_dssp EEEEEEECC-SEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEecC-CCCCeEEEcCCCCEEEEEE
Confidence 988877643 4679999999999666543
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.9e-25 Score=221.63 Aligned_cols=245 Identities=8% Similarity=0.059 Sum_probs=195.4
Q ss_pred CccCCeEEEEECCC-ccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecc-----------ccc
Q psy17243 2 GGMDCLVNVWQMNS-HELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKS-----------HQS 69 (392)
Q Consensus 2 g~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-----------~~~ 69 (392)
++.|+.++||.+.. +.....+..|. .+...+|+|+|++|+++ .++.|.+|++...+ +..+.. |..
T Consensus 220 ~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~ 296 (1045)
T 1k32_A 220 TDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIP 296 (1045)
T ss_dssp ECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECG
T ss_pred EeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccCccccccccccccc
Confidence 34578888888653 44556666565 47788999999999888 48999999995443 335554 344
Q ss_pred ceEEEEEe-cCCCEEEEEeCCCeEEEEEcCCceeee--eccc-ceeEEEEeCCCCEEEEecCCCcEE-EEeCCCCCCCCc
Q psy17243 70 TILAVAVL-SDSRRVVTSDKAGVIAVWVADNAQLLY--SALG-PSKCLTVTHNMKYIVSGDGDNSLR-IWPTSPQTHKDD 144 (392)
Q Consensus 70 ~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~-~~~~~~~~~~~~~l~~~~~d~~i~-~~d~~~~~~~~~ 144 (392)
.+.+++|+ |+|+.|++++ ++.+.+|++.+++... .... .+..+.|+ +++.++.++.++.+. +|++.... .
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~---~ 371 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK---A 371 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC---E
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC---c
Confidence 78999999 9999998887 8899999998876543 2233 66789999 999999988888888 89986432 2
Q ss_pred ceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCC--------
Q psy17243 145 ERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKD-------- 216 (392)
Q Consensus 145 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------- 216 (392)
.... .+...+..++|+||+++|++++.++.|++||+.+++....+.+|...+..++|+ +++++|++++.+
T Consensus 372 ~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S-pDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 372 EKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTIS-DNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp EECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC-TTSCEEEEEEEECSSTTCSC
T ss_pred eEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEEC-CCCCeEEEEecCccccccCC
Confidence 2222 667889999999999999999999999999999998888887899999999999 677777776654
Q ss_pred --CeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcCC
Q psy17243 217 --SNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 217 --g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~~ 257 (392)
+.|++||+.+++ +..+..|...+..++|+|||+.+++...
T Consensus 450 ~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 489999999877 6677778888999999999998887664
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.1e-24 Score=189.66 Aligned_cols=252 Identities=13% Similarity=0.178 Sum_probs=179.6
Q ss_pred CccCCeEEEEECC-Cc--cceeeeccCCcCeeEEEecCCCCeEEEEeCC-CeEEEEeCC--CCc--eeEEecccccceEE
Q psy17243 2 GGMDCLVNVWQMN-SH--ELQSTMEGHLNTVSCVAISPNSIFAVSGSED-NTAKVWGLT--LGS--VVSTFKSHQSTILA 73 (392)
Q Consensus 2 g~~dg~i~vwd~~-~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-g~v~iwd~~--~~~--~~~~~~~~~~~v~~ 73 (392)
++.|+.|++|++. ++ +.+..+ .|...+.+++|+|++++|++++.+ +.|.+|+++ +++ .+..+..+. .+..
T Consensus 11 ~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~ 88 (343)
T 1ri6_A 11 SPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTH 88 (343)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSE
T ss_pred CCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcE
Confidence 3678999999995 33 333333 477889999999999988888876 999999997 554 334454333 7889
Q ss_pred EEEecCCCEEEEEeC-CCeEEEEEcC---Cceeeeec--ccceeEEEEeCCCCEEEEec-CCCcEEEEeCCCCCCCCc-c
Q psy17243 74 VAVLSDSRRVVTSDK-AGVIAVWVAD---NAQLLYSA--LGPSKCLTVTHNMKYIVSGD-GDNSLRIWPTSPQTHKDD-E 145 (392)
Q Consensus 74 ~~~~~~~~~l~~~~~-d~~i~iwd~~---~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~-~ 145 (392)
++|+|++++|++++. ++.|.+||+. ..+.+... ...+.+++|+|+++++++++ .++.|.+||+........ .
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeec
Confidence 999999998877765 8899999994 33343333 23577899999999888877 899999999975221111 1
Q ss_pred --eeeeccccceEEEEEEcCCCEEEEee-CCCcEEEEEcCC--CeE--EEEEec---C---CCceeEEEEecCCCcEEEE
Q psy17243 146 --RFTVSHSEEITCFTVTWDSQYLITGS-RDMSLKVWQVVG--GKL--AQVLVG---H---TDHVSCVAVAVTNKSLVVS 212 (392)
Q Consensus 146 --~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~--~~~--~~~~~~---~---~~~v~~~~~~~~~~~~l~~ 212 (392)
.........+..++|+|+++++++++ .++.|.+||+.. ++. ...+.. . ...+..++|+|.+..++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~ 248 (343)
T 1ri6_A 169 PAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYAC 248 (343)
T ss_dssp EEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEE
T ss_pred ccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEE
Confidence 22223345788999999999776555 789999999953 332 223321 1 2346689999544445556
Q ss_pred ecCCCeEEEEECC--C--CceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 213 GSKDSNLIVWDME--T--GGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 213 ~~~dg~i~iwd~~--~--~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+..++.|.+||+. + .+.+..+..+.. +..++|+|||++++...
T Consensus 249 ~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 249 DRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp ETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEEC
T ss_pred ecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEec
Confidence 7789999999998 2 334445554444 88999999999777764
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=6e-26 Score=216.82 Aligned_cols=246 Identities=9% Similarity=0.014 Sum_probs=177.9
Q ss_pred ccCCeEEEEECCCccce-eeeccCC-----------------cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEe
Q psy17243 3 GMDCLVNVWQMNSHELQ-STMEGHL-----------------NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTF 64 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~-~~~~~h~-----------------~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 64 (392)
+.|+ | +||+.+++.+ ..+..|. ..|.+++|+|+ +.++.+ .++.|++||+.+++.....
T Consensus 42 ~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~ 117 (706)
T 2z3z_A 42 EGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLF 117 (706)
T ss_dssp ETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred eCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEcc
Confidence 3455 8 9999999873 4444443 56999999999 666555 3599999999988765444
Q ss_pred cccccceEEEEEecCCCEEEEEeCCCeEEEEEcCC-----ceeeeeccc--c---------------eeEEEEeCCCCEE
Q psy17243 65 KSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADN-----AQLLYSALG--P---------------SKCLTVTHNMKYI 122 (392)
Q Consensus 65 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----~~~~~~~~~--~---------------~~~~~~~~~~~~l 122 (392)
.+...+.+++|+|+|+.|+++ .++.|++||+.+ ++....... . +.++.|+|++++|
T Consensus 118 -~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~l 195 (706)
T 2z3z_A 118 -DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCL 195 (706)
T ss_dssp -CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEE
T ss_pred -CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEE
Confidence 467778899999999999985 679999999998 765442221 1 4789999999999
Q ss_pred EEec---------------------------------CCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEE
Q psy17243 123 VSGD---------------------------------GDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLIT 169 (392)
Q Consensus 123 ~~~~---------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 169 (392)
++++ .+..|++||+.++..... .....+...+.+++|+||+++|++
T Consensus 196 a~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~ 274 (706)
T 2z3z_A 196 AFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYL-QTGEPKEKFLTNLSWSPDENILYV 274 (706)
T ss_dssp EEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEEC-CCCSCTTCEEEEEEECTTSSEEEE
T ss_pred EEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEee-ccCCCCceeEeeEEEECCCCEEEE
Confidence 9987 446799999975432211 111245677899999999999998
Q ss_pred eeCCC-----cEEEEEcCCCeEEEEEe-c-CCC---ceeEEEEec-CCCcEEEEecCCCeEEEEECC-CCceeeeecccc
Q psy17243 170 GSRDM-----SLKVWQVVGGKLAQVLV-G-HTD---HVSCVAVAV-TNKSLVVSGSKDSNLIVWDME-TGGEEHFLAGHL 237 (392)
Q Consensus 170 ~~~dg-----~i~i~d~~~~~~~~~~~-~-~~~---~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~ 237 (392)
++.++ .|++||+.+++....+. . +.. .+..++|+| .++.++++++.|+.++||+++ +++.+..+..+.
T Consensus 275 ~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~ 354 (706)
T 2z3z_A 275 AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE 354 (706)
T ss_dssp EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS
T ss_pred EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC
Confidence 87765 89999999983333332 2 222 246789994 177899999999999999876 667777777777
Q ss_pred cceeE-EEEcCCCeEEEEc
Q psy17243 238 GCVTC-VKLAGDGTVAMSD 255 (392)
Q Consensus 238 ~~v~~-~~~~~dg~~~~~~ 255 (392)
..+.. ++|+|||+.++..
T Consensus 355 ~~v~~~~~~spdg~~l~~~ 373 (706)
T 2z3z_A 355 WEVTNFAGFDPKGTRLYFE 373 (706)
T ss_dssp SCEEEEEEECTTSSEEEEE
T ss_pred eEEEeeeEEcCCCCEEEEE
Confidence 77776 7899998876653
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=4.7e-25 Score=187.64 Aligned_cols=207 Identities=8% Similarity=0.045 Sum_probs=155.9
Q ss_pred EEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCC-ceeeeecc----cceeEEEEeC
Q psy17243 43 SGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADN-AQLLYSAL----GPSKCLTVTH 117 (392)
Q Consensus 43 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~----~~~~~~~~~~ 117 (392)
.++.|+.|++||+.+++... +..|...|.+++|+|++++|++++ ++.|++||+.+ ++...... ..+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 45678999999999888764 445889999999999999999987 78999999998 76654432 3567899999
Q ss_pred CCCEEEEec--CCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEE-EeeCCCcEEEEEcCC-CeEEEEEecC
Q psy17243 118 NMKYIVSGD--GDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLI-TGSRDMSLKVWQVVG-GKLAQVLVGH 193 (392)
Q Consensus 118 ~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~-~~~~~~~~~~ 193 (392)
++++|+++. .++...+|.+...... ... ......+..++|+|++++|+ ++..++.+.+|++.. ......+..+
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~--~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT--PRL-MTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC--CEE-CCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc--eEE-eecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 999999998 3345555554321111 111 22334588899999999877 777899999998632 2344566678
Q ss_pred CCceeEEEEecCCCcEEE-EecCCCeEEEEECC-CCceeeeecccccceeEEEEcCCCeEEEEc
Q psy17243 194 TDHVSCVAVAVTNKSLVV-SGSKDSNLIVWDME-TGGEEHFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 194 ~~~v~~~~~~~~~~~~l~-~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
...+.+++|+| ++.+|+ ++..++.+++|++. .+..+..+..|...+..++|+|||++++..
T Consensus 172 ~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 172 EGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEE
T ss_pred CCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEE
Confidence 88999999994 555554 55568999999886 566677777788889999999999988875
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=1.9e-24 Score=188.86 Aligned_cols=206 Identities=8% Similarity=0.013 Sum_probs=161.4
Q ss_pred CCcCeeEEEecCCCCeEEEEeC-------CCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEE-eCCCeEEEEE
Q psy17243 25 HLNTVSCVAISPNSIFAVSGSE-------DNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTS-DKAGVIAVWV 96 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l~~~~~-------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd 96 (392)
....+..++|+|+++++++++. ++.|.+||..+++.+..+.. ...+..++|+|++++++++ ..++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 4467889999999998888764 56899999999998888874 4457889999999966555 5579999999
Q ss_pred cCCceeeeeccc------------ceeEEEEeCCCCEEEEec--CCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEc
Q psy17243 97 ADNAQLLYSALG------------PSKCLTVTHNMKYIVSGD--GDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTW 162 (392)
Q Consensus 97 ~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~ 162 (392)
+.+++.+..... ....+.++|++++++++. .++.|.+||..+.+. ......+...+..++|+|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL---KTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE---EEEECCCCTTCCCCEEET
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce---EEEecCCCCccceEEECC
Confidence 999987665433 157899999999888776 478899999974332 222222445578899999
Q ss_pred CCCEEEEeeCCCcEEEEEcCCCeEEEEEec----CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeec
Q psy17243 163 DSQYLITGSRDMSLKVWQVVGGKLAQVLVG----HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLA 234 (392)
Q Consensus 163 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 234 (392)
+++++++++.++.|.+||+.+++.+..+.. +...+..++|+|.+..++++...++.|.+||+.+++.+..+.
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 999999999999999999999998877764 455678899995544455555566999999999888766554
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=2e-24 Score=187.13 Aligned_cols=217 Identities=8% Similarity=0.054 Sum_probs=159.3
Q ss_pred EecCCCC-eEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeC-CCeEEEEEcCCcee-eeecc--
Q psy17243 33 AISPNSI-FAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDK-AGVIAVWVADNAQL-LYSAL-- 107 (392)
Q Consensus 33 ~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~-~~~~~-- 107 (392)
.|.++++ .+++++.++.|.+||.++++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.+++. .....
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 4555544 46778889999999999999988887666667 9999999997777665 88999999998876 43322
Q ss_pred -cceeEEEEeCCCCEEEEecCCC---cEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEe-eCCCc-EEEEEc
Q psy17243 108 -GPSKCLTVTHNMKYIVSGDGDN---SLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITG-SRDMS-LKVWQV 181 (392)
Q Consensus 108 -~~~~~~~~~~~~~~l~~~~~d~---~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~i~d~ 181 (392)
.+..+++++|++++++++..++ .|.+||+.+.+. ... ........+++|+|++++++++ ..++. |.+|++
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~---~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF---IST-IPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE---EEE-EECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe---EEE-EECCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 2334499999999999666553 899999975432 222 2344567899999999866555 55578 999998
Q ss_pred CCCeEE----EEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCce---eeeecccccceeEEEEcCCCeEEEE
Q psy17243 182 VGGKLA----QVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGE---EHFLAGHLGCVTCVKLAGDGTVAMS 254 (392)
Q Consensus 182 ~~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~dg~~~~~ 254 (392)
.....+ ............++|+|.+..+++++..++.|++||+.+++. +..+.. ...+..++|+|||++++.
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v 237 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYV 237 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEE
Confidence 754332 122234456789999954444666777799999999999888 766664 466789999999997665
Q ss_pred c
Q psy17243 255 D 255 (392)
Q Consensus 255 ~ 255 (392)
.
T Consensus 238 ~ 238 (331)
T 3u4y_A 238 L 238 (331)
T ss_dssp E
T ss_pred E
Confidence 4
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=2.2e-24 Score=187.62 Aligned_cols=297 Identities=10% Similarity=0.096 Sum_probs=187.0
Q ss_pred eEEEEeCCCeEEEEeCC-CC--ceeEEecccccceEEEEEecCCCEEEEEeCC-CeEEEEEcC--Ccee--eeec--ccc
Q psy17243 40 FAVSGSEDNTAKVWGLT-LG--SVVSTFKSHQSTILAVAVLSDSRRVVTSDKA-GVIAVWVAD--NAQL--LYSA--LGP 109 (392)
Q Consensus 40 ~l~~~~~dg~v~iwd~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~--~~~~--~~~~--~~~ 109 (392)
.+++++.|+.|++|+++ ++ +.+..+ .+...+.+++|+|++++|++++.+ +.|.+|++. +++. +... ...
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCC
Confidence 34455789999999985 33 233333 367788999999999999988887 999999997 4442 2222 236
Q ss_pred eeEEEEeCCCCEEEEecC-CCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEee-CCCcEEEEEcCC-CeE
Q psy17243 110 SKCLTVTHNMKYIVSGDG-DNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGS-RDMSLKVWQVVG-GKL 186 (392)
Q Consensus 110 ~~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~ 186 (392)
+..++|+|+++++++++. ++.|.+||+..+....... .......+.+++|+|+++++++++ .++.|.+||+.+ ++.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVD-VVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEE-EECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccc-cccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 788999999998877654 8889999995221112222 223445688999999999888877 889999999987 544
Q ss_pred EE----EEec-CCCceeEEEEecCCCcEEEEecCCCeEEEEECCC--Cce--eeeec---cc---ccceeEEEEcCCCeE
Q psy17243 187 AQ----VLVG-HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMET--GGE--EHFLA---GH---LGCVTCVKLAGDGTV 251 (392)
Q Consensus 187 ~~----~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--~~~--~~~~~---~~---~~~v~~~~~~~dg~~ 251 (392)
.. .+.. ....+..++|+|.+..+++++..++.|.+|++.. ++. ...+. .. ...+..++|+|||++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 32 2232 3347888999954444556666899999999953 432 22222 11 235668999999987
Q ss_pred EEEcC-CCCCCCCCCCccccccccccccceeEEEec--cCCcceeEEEeecccccceeEEEeeccccceecceeccCCCC
Q psy17243 252 AMSDL-PPSRPAGPKRPLRRLLKKEVSLDTYTWQRK--YGHLTSSIMMAAVDERLKRRFSVSASMEEISKIPIKDNVGSQ 328 (392)
Q Consensus 252 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~~~~~~~~~~ 328 (392)
++... .+. ....|... .+.... +.. +.........
T Consensus 245 l~v~~~~~~-------------------~i~v~d~~~~~~~~~~---------------~~~--------~~~~~~~~~~ 282 (343)
T 1ri6_A 245 LYACDRTAS-------------------LITVFSVSEDGSVLSK---------------EGF--------QPTETQPRGF 282 (343)
T ss_dssp EEEEETTTT-------------------EEEEEEECTTSCCEEE---------------EEE--------EECSSSCCCE
T ss_pred EEEEecCCC-------------------EEEEEEEcCCCCceEE---------------eee--------ecCCCccceE
Confidence 76432 110 11122221 000000 000 0000112233
Q ss_pred CCChhhhhhhcccChHHHHHHhhCC--CCCCccccccccccccCccccccccCccC
Q psy17243 329 GLGPEQAALAQSQHFDQLEALWNKK--SPPRSRRFEHSMSKQNSYSSRQHSVDTDE 382 (392)
Q Consensus 329 ~~s~dg~~la~s~~~d~~i~~Wd~~--~~~~~~~~~~~~~~~~~~~~~~fspdg~~ 382 (392)
+|+|||++|+++...|+.|++|++. ++.. .. ...+........++|.|+-+.
T Consensus 283 ~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~-~~-~~~~~~g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 283 NVDHSGKYLIAAGQKSHHISVYEIVGEQGLL-HE-KGRYAVGQGPMWVVVNAHEGG 336 (343)
T ss_dssp EECTTSSEEEEECTTTCEEEEEEEETTTTEE-EE-EEEEECSSSCCEEEEEEEC--
T ss_pred EECCCCCEEEEecCCCCeEEEEEEcCCCcee-eE-ccccccCCCCeeEEEEcccCC
Confidence 7999999988666678999999654 3332 11 223333345666888887553
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=1.2e-22 Score=177.09 Aligned_cols=252 Identities=11% Similarity=0.096 Sum_probs=176.2
Q ss_pred ccCCeEEEEECC--Ccccee-eeccCCcCeeEEEecCCCCeEEEEeC---CCeEEEEeCCCCc--eeEEecccccceEEE
Q psy17243 3 GMDCLVNVWQMN--SHELQS-TMEGHLNTVSCVAISPNSIFAVSGSE---DNTAKVWGLTLGS--VVSTFKSHQSTILAV 74 (392)
Q Consensus 3 ~~dg~i~vwd~~--~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~--~~~~~~~~~~~v~~~ 74 (392)
+.++.|.+|++. +++... ....+...+..++|+|+++ |++++. ++.|.+|++.+++ .+..+..+...+..+
T Consensus 13 ~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp SSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred CCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 456678888764 455433 2334567788999999999 555544 6899999997775 344545567788999
Q ss_pred EEecCCCEEEEEe-CCCeEEEEEcCC-c--eeeeecc------------cceeEEEEeCCCCEEEEecCCCcEEEEeCCC
Q psy17243 75 AVLSDSRRVVTSD-KAGVIAVWVADN-A--QLLYSAL------------GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSP 138 (392)
Q Consensus 75 ~~~~~~~~l~~~~-~d~~i~iwd~~~-~--~~~~~~~------------~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 138 (392)
+|+|++++|++++ .++.+.+|++.. + +.+.... ..+.+++++|+++.+++...++.|.+|++..
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 9999999998888 679999999963 2 2232221 1366799999999666667788999999973
Q ss_pred CCCCCcc-eeeeccccceEEEEEEcCCCEEEE-eeCCCcEEEEEcCC--CeE--EEEEecCC------CceeEEEEecCC
Q psy17243 139 QTHKDDE-RFTVSHSEEITCFTVTWDSQYLIT-GSRDMSLKVWQVVG--GKL--AQVLVGHT------DHVSCVAVAVTN 206 (392)
Q Consensus 139 ~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~~~~~ 206 (392)
....... .........+..++|+|+++++++ ...++.|.+|++.. ++. +..+.... ..+..++|+ ++
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s-pd 250 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS-HD 250 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC-TT
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC-CC
Confidence 2111111 112223346788999999996666 45688999999874 543 23333222 347889999 55
Q ss_pred CcEE-EEecCCCeEEEEECCC---CceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 207 KSLV-VSGSKDSNLIVWDMET---GGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 207 ~~~l-~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+++| ++...++.|.+|++.. .+.+..+..+...+..++|+|||++++...
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEE
Confidence 6544 6667789999999973 244556666666789999999999777653
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=4.6e-25 Score=211.12 Aligned_cols=220 Identities=8% Similarity=0.020 Sum_probs=165.2
Q ss_pred eEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEeccccc---ceEEEEEecCCCEEEEEeC---------CCeEEEEEc
Q psy17243 30 SCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQS---TILAVAVLSDSRRVVTSDK---------AGVIAVWVA 97 (392)
Q Consensus 30 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~i~iwd~ 97 (392)
..++|+|++++++++ .|+.|++||+.+++....+..+.. .+.+++|+|||++|++++. ++.|++||+
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 378999999765554 699999999999998877775544 3899999999999998876 789999999
Q ss_pred CCceee--eecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccc-----------------eEEE
Q psy17243 98 DNAQLL--YSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEE-----------------ITCF 158 (392)
Q Consensus 98 ~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~-----------------v~~~ 158 (392)
.+++.+ ..+...+..++|+|+|+.|+.+. ++.|++|++.++..... ...++... ..++
T Consensus 98 ~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l--~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 98 SNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI--TFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC--CCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE--ecCCCcCCeEcccccceeeeecccCcccE
Confidence 998873 33446788899999999999885 78999999975433211 11122121 2489
Q ss_pred EEEcCCCEEEEeeCCC----------------------------------cEEEEEcCCCeEE---E-----EEecCCCc
Q psy17243 159 TVTWDSQYLITGSRDM----------------------------------SLKVWQVVGGKLA---Q-----VLVGHTDH 196 (392)
Q Consensus 159 ~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~~---~-----~~~~~~~~ 196 (392)
+|+|||++|++++.|. .|++||+.+++.. . .+.+|...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999999887552 7889999887642 1 12357778
Q ss_pred eeEEEEecCCCcEEEEecCC----CeEEEEE----CCCCceeeee----ccccccee-----EEEEcCCCeEEEE
Q psy17243 197 VSCVAVAVTNKSLVVSGSKD----SNLIVWD----METGGEEHFL----AGHLGCVT-----CVKLAGDGTVAMS 254 (392)
Q Consensus 197 v~~~~~~~~~~~~l~~~~~d----g~i~iwd----~~~~~~~~~~----~~~~~~v~-----~~~~~~dg~~~~~ 254 (392)
+..++|+| ++.++++.... ..|.+|| +.+++....+ ..|...+. .+.|+|||+.++.
T Consensus 255 ~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 255 FSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp EEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred EEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEE
Confidence 99999995 47777764322 3488999 8877766555 46666676 8899999996554
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=1.8e-22 Score=175.02 Aligned_cols=231 Identities=11% Similarity=0.029 Sum_probs=178.8
Q ss_pred CCccCCeEEEEECCCccceeeeccCCc--CeeEEEecCCCCeE-EEEeCCCeEEEEeCCCCceeEEeccc-----ccceE
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHLN--TVSCVAISPNSIFA-VSGSEDNTAKVWGLTLGSVVSTFKSH-----QSTIL 72 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~~-----~~~v~ 72 (392)
+++.++.|++||+.+++.+..+..... .+..++|+|+++++ +++..++.|.+||+.+++.+..+... ...+.
T Consensus 6 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 6 APARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred EcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 356799999999999998888763322 58899999999765 45566789999999999988776632 22677
Q ss_pred EEEEecCCCEEEEEe------------CCCeEEEEEcCCceeeeecc--cceeEEEEeCCCCEEEEecCCCcEEEEeCCC
Q psy17243 73 AVAVLSDSRRVVTSD------------KAGVIAVWVADNAQLLYSAL--GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSP 138 (392)
Q Consensus 73 ~~~~~~~~~~l~~~~------------~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 138 (392)
.++|+|++++++++. .++.|.+||+.+++.+.... ..+..++++|++++++++ ++.|.+||+.+
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~ 163 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEA 163 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTT
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCC
Confidence 899999999998886 67999999999987765543 356788999999988888 68899999875
Q ss_pred CCCCCcc---------------------------------------------------ee------------eeccccce
Q psy17243 139 QTHKDDE---------------------------------------------------RF------------TVSHSEEI 155 (392)
Q Consensus 139 ~~~~~~~---------------------------------------------------~~------------~~~~~~~v 155 (392)
.+..... .. ...+...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 243 (337)
T 1pby_B 164 GTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY 243 (337)
T ss_dssp TEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred CcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCce
Confidence 4221000 00 00112345
Q ss_pred EEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc
Q psy17243 156 TCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG 235 (392)
Q Consensus 156 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 235 (392)
.+++|+|++++++++ ++.|.+||+.+++.+..+.. ...+.+++|+ +++++|++++.++.|++||+.+++.+..+..
T Consensus 244 ~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s-~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 244 FSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVS-TDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEEC-TTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred eeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEEC-CCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 678999999999988 68999999999998887764 3567899999 5667777778899999999999998887765
Q ss_pred cc
Q psy17243 236 HL 237 (392)
Q Consensus 236 ~~ 237 (392)
+.
T Consensus 320 ~~ 321 (337)
T 1pby_B 320 PG 321 (337)
T ss_dssp GG
T ss_pred CC
Confidence 43
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=1.1e-22 Score=194.35 Aligned_cols=248 Identities=8% Similarity=0.043 Sum_probs=187.2
Q ss_pred cCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCC-----CceeEEecccccc--------
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTL-----GSVVSTFKSHQST-------- 70 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~-----~~~~~~~~~~~~~-------- 70 (392)
.++.|++||+.+++... +..+...+.+++|+|+|++|+++ .++.|++||+.+ ++.......+...
T Consensus 99 ~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 99 TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 46899999999876544 44577889999999999999985 689999999998 7766555444333
Q ss_pred ------eEEEEEecCCCEEEEEe---------------------------------CCCeEEEEEcCCceeeeec-----
Q psy17243 71 ------ILAVAVLSDSRRVVTSD---------------------------------KAGVIAVWVADNAQLLYSA----- 106 (392)
Q Consensus 71 ------v~~~~~~~~~~~l~~~~---------------------------------~d~~i~iwd~~~~~~~~~~----- 106 (392)
+.++.|+|||++|++++ .+..|++||+.+++.....
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 48899999999999987 4468999999998764432
Q ss_pred ccceeEEEEeCCCCEEEEecCCC-----cEEEEeCCCCCCCCcceeeecccc---ceEEEEEEc--CCCEEEEeeCCCcE
Q psy17243 107 LGPSKCLTVTHNMKYIVSGDGDN-----SLRIWPTSPQTHKDDERFTVSHSE---EITCFTVTW--DSQYLITGSRDMSL 176 (392)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~---~v~~~~~~~--~~~~l~~~~~dg~i 176 (392)
...+..+.|+|+++.|++++.++ .|.+||+.++....... ...+.. .+..++|+| ++++++++..++.+
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~ 335 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLF-VETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWN 335 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEE-EEECSSCCCCCSCCEECTTCSSEEEEEECTTSSC
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEE-EccCCCeECccCCceeecCCCCEEEEEEccCCcc
Confidence 23567899999999999987765 89999997552111111 111221 246789999 99999999999999
Q ss_pred EEEEcC-CCeEEEEEecCCCceeE-EEEecCCCcEEEEecCCC----eEEEEECCCCceeeeecccccceeEEEEcCCCe
Q psy17243 177 KVWQVV-GGKLAQVLVGHTDHVSC-VAVAVTNKSLVVSGSKDS----NLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGT 250 (392)
Q Consensus 177 ~i~d~~-~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~ 250 (392)
++|++. +++.+..+..+...+.. ++|+|.+..+++++..++ .|..||+.+++ ...+. +...+.+++|+|||+
T Consensus 336 ~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~ 413 (706)
T 2z3z_A 336 HLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGS 413 (706)
T ss_dssp EEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSS
T ss_pred EEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCC
Confidence 999886 66777788878777876 799955455556666665 78888887765 33443 667789999999999
Q ss_pred EEEEcC
Q psy17243 251 VAMSDL 256 (392)
Q Consensus 251 ~~~~~~ 256 (392)
+++...
T Consensus 414 ~l~~~~ 419 (706)
T 2z3z_A 414 AIIDIF 419 (706)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 887653
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=7.5e-23 Score=195.99 Aligned_cols=252 Identities=10% Similarity=0.002 Sum_probs=181.8
Q ss_pred ccCCeEEEEECCCccceeeeccCCc---CeeEEEecCCCCeEEEEeCC---------CeEEEEeCCCCceeEEec---cc
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEGHLN---TVSCVAISPNSIFAVSGSED---------NTAKVWGLTLGSVVSTFK---SH 67 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~d---------g~v~iwd~~~~~~~~~~~---~~ 67 (392)
+.||.|++||+.+++....+..|.. .|.+++|+|||++|++++.+ +.+.+||+++++. ..+. .|
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~ 112 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVS 112 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCC
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccc
Confidence 5789999999999998888877765 49999999999999998764 7888999998876 3333 34
Q ss_pred ccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeeccc---c------------------eeEEEEeCCCCEEEEec
Q psy17243 68 QSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSALG---P------------------SKCLTVTHNMKYIVSGD 126 (392)
Q Consensus 68 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~------------------~~~~~~~~~~~~l~~~~ 126 (392)
...+..++|+|||+.|+.++. +.|++||+.+++....... . +..+.|+|+++.|++++
T Consensus 113 ~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 113 NAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp SCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred cccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 445889999999999999886 7999999998766543221 1 26899999999999987
Q ss_pred CCC----------------------------------cEEEEeCCCCCCCCccee---eeccccceEEEEEEcCCCEEEE
Q psy17243 127 GDN----------------------------------SLRIWPTSPQTHKDDERF---TVSHSEEITCFTVTWDSQYLIT 169 (392)
Q Consensus 127 ~d~----------------------------------~i~~~d~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~ 169 (392)
.++ .|++||+.+......+.. ...+...+..++|+||+++|++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 192 INDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp EECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred ECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 543 789999875442111110 0113567899999999998876
Q ss_pred eeC----CCcEEEEEcCCCeEEEEEec-CCCce----eEEEEecCCCcEEEE-ecCCC------eEEEEE-CCCCc--ee
Q psy17243 170 GSR----DMSLKVWQVVGGKLAQVLVG-HTDHV----SCVAVAVTNKSLVVS-GSKDS------NLIVWD-METGG--EE 230 (392)
Q Consensus 170 ~~~----dg~i~i~d~~~~~~~~~~~~-~~~~v----~~~~~~~~~~~~l~~-~~~dg------~i~iwd-~~~~~--~~ 230 (392)
... +..|++||+.+++....+.. +...+ ..++|+|++..+++. +..++ .|.+|| ...++ +.
T Consensus 272 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (723)
T 1xfd_A 272 WLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNI 351 (723)
T ss_dssp EEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCC
T ss_pred EEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccce
Confidence 643 35799999999887766543 33333 378999554445544 55677 577777 34444 14
Q ss_pred eeecccccceeE-EEEcCCCeEEEEcC
Q psy17243 231 HFLAGHLGCVTC-VKLAGDGTVAMSDL 256 (392)
Q Consensus 231 ~~~~~~~~~v~~-~~~~~dg~~~~~~~ 256 (392)
..+..+...+.. ++|+|||+.++...
T Consensus 352 ~~l~~~~~~~~~~~~~spdg~~l~~~~ 378 (723)
T 1xfd_A 352 QSITSGDWDVTKILAYDEKGNKIYFLS 378 (723)
T ss_dssp CBSCCSSSCEEEEEEEETTTTEEEEEE
T ss_pred eEeecCCeEEEeeeEEcCCCCEEEEEE
Confidence 455443444544 69999999887543
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=4.9e-21 Score=167.86 Aligned_cols=251 Identities=13% Similarity=0.223 Sum_probs=174.4
Q ss_pred CccCCeEEEEEC--CCccceeeeccCCcCeeEEEecCCCCeEEEEeCC----CeEEEEeCCC--Cce--eEEecccccce
Q psy17243 2 GGMDCLVNVWQM--NSHELQSTMEGHLNTVSCVAISPNSIFAVSGSED----NTAKVWGLTL--GSV--VSTFKSHQSTI 71 (392)
Q Consensus 2 g~~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----g~v~iwd~~~--~~~--~~~~~~~~~~v 71 (392)
++.++.|.+|.+ ++++.......+......++|+|++++|++++.+ +.|.+|+++. ++. +.....+....
T Consensus 23 ~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p 102 (361)
T 3scy_A 23 SGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADP 102 (361)
T ss_dssp SSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCE
T ss_pred CCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCc
Confidence 456788999976 4555443322267778899999999999998875 7999998865 433 33444345567
Q ss_pred EEEEEecCCCEEEEEe-CCCeEEEEEcCCceeeeec-----------------ccceeEEEEeCCCCEEEEec-CCCcEE
Q psy17243 72 LAVAVLSDSRRVVTSD-KAGVIAVWVADNAQLLYSA-----------------LGPSKCLTVTHNMKYIVSGD-GDNSLR 132 (392)
Q Consensus 72 ~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~~~-~d~~i~ 132 (392)
..+++ ++++|++++ .++.+.+|++.....+... ..+..+++++|+++++++++ .++.|.
T Consensus 103 ~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 103 CYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp EEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 77777 788777776 5789999999754333211 11336799999999776655 588999
Q ss_pred EEeCCCCCC----C--Cc----ceeeeccccceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCeE--EEEEe---cCCCc
Q psy17243 133 IWPTSPQTH----K--DD----ERFTVSHSEEITCFTVTWDSQYLITGS-RDMSLKVWQVVGGKL--AQVLV---GHTDH 196 (392)
Q Consensus 133 ~~d~~~~~~----~--~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~---~~~~~ 196 (392)
+|++..... . .. ..........+..++|+|+++++++++ .++.|.+||+.+++. +..+. .+...
T Consensus 181 v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~ 260 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQG 260 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCC
T ss_pred EEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCC
Confidence 999875432 1 00 122234456678999999999888777 589999999987754 23332 22345
Q ss_pred eeEEEEecCCCcEEEEec-C-CCeEEEEECC--CCc--eeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 197 VSCVAVAVTNKSLVVSGS-K-DSNLIVWDME--TGG--EEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 197 v~~~~~~~~~~~~l~~~~-~-dg~i~iwd~~--~~~--~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
...++|+ +++++|+++. . ++.|.+|++. +++ .+..+.. ...+..++|+|||++++...
T Consensus 261 ~~~i~~s-pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 261 SGDIHLS-PDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEEEC-TTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred cccEEEC-CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence 6799999 5666665544 4 5899999986 444 3444444 45788999999999877754
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=3.6e-23 Score=198.03 Aligned_cols=249 Identities=10% Similarity=0.031 Sum_probs=177.0
Q ss_pred ccCCeEEEEECCCccceeeeccCCc---CeeEEEecCCCCeEEEEeC---------CCeEEEEeCCCCceeEEecccccc
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEGHLN---TVSCVAISPNSIFAVSGSE---------DNTAKVWGLTLGSVVSTFKSHQST 70 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~---------dg~v~iwd~~~~~~~~~~~~~~~~ 70 (392)
+.|+.|++||+.+++....+..|.. .+.+++|||||++|++++. ++.|++||+++++.+.... ....
T Consensus 33 ~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~ 111 (719)
T 1z68_A 33 SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRP 111 (719)
T ss_dssp CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSS
T ss_pred cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcc
Confidence 3589999999999988777765544 4999999999999998876 7899999999987631111 1356
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeecc-c--------------------ceeEEEEeCCCCEEEEecCCC
Q psy17243 71 ILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSAL-G--------------------PSKCLTVTHNMKYIVSGDGDN 129 (392)
Q Consensus 71 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~l~~~~~d~ 129 (392)
+..++|+|||+.|+.+. ++.|++||+.+++...... + ....++|+|||++|++++.|.
T Consensus 112 ~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 112 IQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp BCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred cccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC
Confidence 88999999999999886 7899999998876543221 1 114899999999999987652
Q ss_pred ----------------------------------cEEEEeCCCCCCCCccee-----eeccccceEEEEEEcCCCEEEEe
Q psy17243 130 ----------------------------------SLRIWPTSPQTHKDDERF-----TVSHSEEITCFTVTWDSQYLITG 170 (392)
Q Consensus 130 ----------------------------------~i~~~d~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~ 170 (392)
.|++||+.++........ ...+...+..++|+||++++++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~ 270 (719)
T 1z68_A 191 TDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQW 270 (719)
T ss_dssp TTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEE
T ss_pred CCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEE
Confidence 788999875432100011 12467788999999998777764
Q ss_pred eCC----CcEEEEE----cCCCeEEEEE----ecCCCcee-----EEEEecCCCcEEE-EecCCC--eEEEEECCCCcee
Q psy17243 171 SRD----MSLKVWQ----VVGGKLAQVL----VGHTDHVS-----CVAVAVTNKSLVV-SGSKDS--NLIVWDMETGGEE 230 (392)
Q Consensus 171 ~~d----g~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~~~~~~~~l~-~~~~dg--~i~iwd~~~~~~~ 230 (392)
... ..|.+|| +.+++....+ ..|...+. .+.|+|++..+++ +...+| .|.+||+.+++ .
T Consensus 271 ~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~ 349 (719)
T 1z68_A 271 LKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-A 349 (719)
T ss_dssp EESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-C
T ss_pred eccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-e
Confidence 432 3488999 7777655444 35666676 7899954444433 344555 57777887766 4
Q ss_pred eeecccccceeEEEEcCCCeEEEEc
Q psy17243 231 HFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 231 ~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
..+..+...+..+.++ +++.++..
T Consensus 350 ~~lt~~~~~v~~~~~~-d~~~i~~~ 373 (719)
T 1z68_A 350 IQITSGKWEAINIFRV-TQDSLFYS 373 (719)
T ss_dssp EECSCSSSCEEEEEEE-CSSEEEEE
T ss_pred EecccCceEEEEEEEE-eCCEEEEE
Confidence 4555556667777777 76665553
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=2.6e-22 Score=174.08 Aligned_cols=266 Identities=10% Similarity=-0.018 Sum_probs=184.1
Q ss_pred CeEEEEeCCCeEEEEeCCCCceeEEeccccc--ceEEEEEecCCCEEE-EEeCCCeEEEEEcCCceeeeeccc-------
Q psy17243 39 IFAVSGSEDNTAKVWGLTLGSVVSTFKSHQS--TILAVAVLSDSRRVV-TSDKAGVIAVWVADNAQLLYSALG------- 108 (392)
Q Consensus 39 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~------- 108 (392)
++|++++.++.|.+||+.+++.+..+..... .+..++|+|+++.++ +...++.|.+||+.+++.+..+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999999888763322 578999999998765 455678999999999887654432
Q ss_pred -ceeEEEEeCCCCEEEEec------------CCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCc
Q psy17243 109 -PSKCLTVTHNMKYIVSGD------------GDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMS 175 (392)
Q Consensus 109 -~~~~~~~~~~~~~l~~~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 175 (392)
.+..++++|++++++++. .++.|.+||+.+.+. .... .....+.+++|+|++++|+++ ++.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~---~~~~-~~~~~~~~~~~s~dg~~l~~~--~~~ 155 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR---RKAF-EAPRQITMLAWARDGSKLYGL--GRD 155 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE---EEEE-ECCSSCCCEEECTTSSCEEEE--SSS
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE---EEEE-eCCCCcceeEECCCCCEEEEe--CCe
Confidence 456899999999999886 579999999974322 1222 234567888999999988888 688
Q ss_pred EEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCC-----------------------eEEEEECCCCcee-e
Q psy17243 176 LKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDS-----------------------NLIVWDMETGGEE-H 231 (392)
Q Consensus 176 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----------------------~i~iwd~~~~~~~-~ 231 (392)
|.+||+.+++....+..+... ..+.|+|.+..+++++..++ .|.+||+.+++.. .
T Consensus 156 i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred EEEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 999999999988777654311 12367744433333333333 4689999998765 2
Q ss_pred eecccccceeEEEEcCCCeEEEEcCCCCCCCCCCCccccccccccccceeEEEeccCCcceeEEEeecccccceeEEEee
Q psy17243 232 FLAGHLGCVTCVKLAGDGTVAMSDLPPSRPAGPKRPLRRLLKKEVSLDTYTWQRKYGHLTSSIMMAAVDERLKRRFSVSA 311 (392)
Q Consensus 232 ~~~~~~~~v~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 311 (392)
.+..+...+.+++|+|||++++... ...+.|....+..... +..
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~~---------------------~~v~~~d~~~~~~~~~---------------~~~ 278 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGAY---------------------NVLESFDLEKNASIKR---------------VPL 278 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEE---------------------SEEEEEETTTTEEEEE---------------EEC
T ss_pred ecCCCCCceeeEEECCCCCEEEEeC---------------------CeEEEEECCCCcCcce---------------ecC
Confidence 3344556788999999999888751 0122222211110000 000
Q ss_pred ccccceecceeccCCCCCCChhhhhhhcccChHHHHHHhhCCCCCCc
Q psy17243 312 SMEEISKIPIKDNVGSQGLGPEQAALAQSQHFDQLEALWNKKSPPRS 358 (392)
Q Consensus 312 s~d~~~~~~~~~~~~~~~~s~dg~~la~s~~~d~~i~~Wd~~~~~~~ 358 (392)
.......+|+|||++|+ +++.|+.|++||+.+++..
T Consensus 279 ----------~~~~~~~~~s~dg~~l~-~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 279 ----------PHSYYSVNVSTDGSTVW-LGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp ----------SSCCCEEEECTTSCEEE-EESBSSEEEEEETTTCCEE
T ss_pred ----------CCceeeEEECCCCCEEE-EEcCCCcEEEEECcCCcEE
Confidence 00112236899999888 5577899999999887763
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=3.3e-21 Score=168.01 Aligned_cols=228 Identities=9% Similarity=-0.019 Sum_probs=170.9
Q ss_pred CccCCeEEEEECCCccceeeeccCC-cCeeEEEecCCCCeEE-EEeCCCeEEEEeCCCCceeEEeccc------ccceEE
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHL-NTVSCVAISPNSIFAV-SGSEDNTAKVWGLTLGSVVSTFKSH------QSTILA 73 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~------~~~v~~ 73 (392)
++.++.|++||+.+++.+..+..+. ..+..++|+|++++++ +...++.|.+||+.+++.+..+... ...+..
T Consensus 17 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~ 96 (349)
T 1jmx_B 17 TNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYS 96 (349)
T ss_dssp EETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSC
T ss_pred eCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccc
Confidence 4678999999999999888887543 2578999999998654 5567899999999999888777632 233788
Q ss_pred EEEecCCCEEEEEeCC------------CeEEEEEcCCceee---e--ecccceeEEEEeCCCCEEEEecCCCcEEEEeC
Q psy17243 74 VAVLSDSRRVVTSDKA------------GVIAVWVADNAQLL---Y--SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPT 136 (392)
Q Consensus 74 ~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~---~--~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~ 136 (392)
++|+|+++++++++.+ +.|.+||+.+++.. . .....+.+++++|+++ +++++. .|.+||+
T Consensus 97 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~ 173 (349)
T 1jmx_B 97 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDV 173 (349)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECT
T ss_pred eEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeC
Confidence 9999999999998865 89999999885432 2 2233567888999999 666543 4999998
Q ss_pred CCCCCCCcceeee-----------------------------------------------------------------cc
Q psy17243 137 SPQTHKDDERFTV-----------------------------------------------------------------SH 151 (392)
Q Consensus 137 ~~~~~~~~~~~~~-----------------------------------------------------------------~~ 151 (392)
.+.+......... .+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (349)
T 1jmx_B 174 KTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADL 253 (349)
T ss_dssp TTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccC
Confidence 7543221110000 01
Q ss_pred ccceEEEEEEc-CCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCcee
Q psy17243 152 SEEITCFTVTW-DSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEE 230 (392)
Q Consensus 152 ~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 230 (392)
...+..++|+| ++++++++ ++.|.+||+.+++.+..+.. ...+.+++|+ +++.+|++++.++.|++||+.+++.+
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s-~dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFD-KKGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEEC-SSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred CCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEEC-CCCCEEEEecCCCeEEEEecccccee
Confidence 12456778889 99999988 88999999999998887763 3457789999 55555666778899999999999888
Q ss_pred eeeccc
Q psy17243 231 HFLAGH 236 (392)
Q Consensus 231 ~~~~~~ 236 (392)
..++..
T Consensus 330 ~~~~~~ 335 (349)
T 1jmx_B 330 KNIKLP 335 (349)
T ss_dssp EEEECS
T ss_pred eeeecC
Confidence 777543
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=4.4e-22 Score=178.03 Aligned_cols=195 Identities=11% Similarity=0.053 Sum_probs=149.3
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCC----------cee------EEecccccceEEEEEecCCCEEE----E
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLG----------SVV------STFKSHQSTILAVAVLSDSRRVV----T 85 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----------~~~------~~~~~~~~~v~~~~~~~~~~~l~----~ 85 (392)
...++.+++++++.++++++.++ +++|+.... ..+ ..+ .+...|.+++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEec
Confidence 44688999999999999999887 888875311 011 112 2566799999999999999 7
Q ss_pred EeCCCeEEEEEcCCc--------ee---eee---cccceeEEEEeCC-CCEEEEecCCCcEEEEeCCCCCCCCcceeeec
Q psy17243 86 SDKAGVIAVWVADNA--------QL---LYS---ALGPSKCLTVTHN-MKYIVSGDGDNSLRIWPTSPQTHKDDERFTVS 150 (392)
Q Consensus 86 ~~~d~~i~iwd~~~~--------~~---~~~---~~~~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 150 (392)
++.|+.|++||+.+. +. +.. +...+.+++|+|+ +++|++++.||.|++||+++. ........
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~---~~~~~~~~ 190 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET---VKVCATLP 190 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS---EEEEEEEC
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC---cceeeccC
Confidence 888999999998765 11 222 4568999999998 889999999999999999854 22333446
Q ss_pred cccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCC-------CceeEEEEecCCCcEEEE-ecCCC-----
Q psy17243 151 HSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHT-------DHVSCVAVAVTNKSLVVS-GSKDS----- 217 (392)
Q Consensus 151 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~-~~~dg----- 217 (392)
|...|.+++|+|++++|++|+.||.|++||++ ++....+..|. ..+.+++|++ +..++++ ...+|
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTLETS 268 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCSSSC
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec-CceEEEEEccCCCccCCC
Confidence 78899999999999999999999999999998 55555554432 3789999994 5555543 33443
Q ss_pred -eEEEEECCCC
Q psy17243 218 -NLIVWDMETG 227 (392)
Q Consensus 218 -~i~iwd~~~~ 227 (392)
.+++|++.+.
T Consensus 269 ~~v~i~~l~~~ 279 (434)
T 2oit_A 269 PDVVMALLPKK 279 (434)
T ss_dssp CEEEEEECCCT
T ss_pred CceEEEEeccC
Confidence 3999999865
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=1e-21 Score=173.99 Aligned_cols=215 Identities=7% Similarity=-0.062 Sum_probs=153.9
Q ss_pred EEECCCccceeeeccCCcCeeE-----EEecCCCCeEEEEeC-CC--eEEEEeCCCCceeEEecccccceEEEEEecCCC
Q psy17243 10 VWQMNSHELQSTMEGHLNTVSC-----VAISPNSIFAVSGSE-DN--TAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSR 81 (392)
Q Consensus 10 vwd~~~~~~~~~~~~h~~~v~~-----~~~~~~~~~l~~~~~-dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 81 (392)
.+|..++..+..+..|...... .+|+|||++|+.++. ++ .|.+||+.+++.......+...+..+.|+|+++
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~ 93 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD 93 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC
Confidence 4566788888888888766665 889999999998887 66 488889999988777776666666788999999
Q ss_pred EEEEEeCCCeEEEEEcCCceeeeecc--cc-ee--EEEEeCCCCEEEEe----------------------cCCCcEEEE
Q psy17243 82 RVVTSDKAGVIAVWVADNAQLLYSAL--GP-SK--CLTVTHNMKYIVSG----------------------DGDNSLRIW 134 (392)
Q Consensus 82 ~l~~~~~d~~i~iwd~~~~~~~~~~~--~~-~~--~~~~~~~~~~l~~~----------------------~~d~~i~~~ 134 (392)
.|+.++.++.|++||+.+++...... .. .. ...+++++..++.. ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 99999999999999999987643322 21 22 23458899888742 234679999
Q ss_pred eCCCCCCCCcceeeeccccceEEEEEEc-CCCEEEEeeCC------CcEEEEEcCCCeEEEEEecCC--CceeEEEEecC
Q psy17243 135 PTSPQTHKDDERFTVSHSEEITCFTVTW-DSQYLITGSRD------MSLKVWQVVGGKLAQVLVGHT--DHVSCVAVAVT 205 (392)
Q Consensus 135 d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~ 205 (392)
|+.++. ......+...+..++|+| +++.|+....+ ..|.++|+..++. ..+..+. ..+...+|+|.
T Consensus 174 d~~~g~----~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 174 DLKTGE----STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp ETTTCC----EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTT
T ss_pred ECCCCc----eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCC
Confidence 987542 222334566789999999 99988877653 3788888765543 3444344 35778899954
Q ss_pred CCcEEEEecCCC----eEEEEECCCCce
Q psy17243 206 NKSLVVSGSKDS----NLIVWDMETGGE 229 (392)
Q Consensus 206 ~~~~l~~~~~dg----~i~iwd~~~~~~ 229 (392)
+..+++.+..++ .|++||+.+++.
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCce
Confidence 444444443322 399999988764
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=3.6e-21 Score=179.63 Aligned_cols=237 Identities=14% Similarity=0.036 Sum_probs=176.5
Q ss_pred cCCeEEEEECCCccceeeeccCC-cCeeEEEecCCCCeEEEEeC---CCeEEEEeCCC---CceeEEecccccceEEEEE
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHL-NTVSCVAISPNSIFAVSGSE---DNTAKVWGLTL---GSVVSTFKSHQSTILAVAV 76 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~---dg~v~iwd~~~---~~~~~~~~~~~~~v~~~~~ 76 (392)
.||+++||++.+++.. .+..|. ..+..++|+|+ +++++++. +....+|.++. +... .+... ..+...+|
T Consensus 42 ~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~ 117 (582)
T 3o4h_A 42 SEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSG 117 (582)
T ss_dssp ETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEE
T ss_pred cCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeee
Confidence 3899999999766554 454455 68999999999 77777765 45556655433 3322 44322 23446688
Q ss_pred ecCCCE-EEEEeCCCeEEEEEcCCceeeeecccceeEEEEeCCCCEEEEecCC----CcEEEEeCCCCCCCCcceeeecc
Q psy17243 77 LSDSRR-VVTSDKAGVIAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDGD----NSLRIWPTSPQTHKDDERFTVSH 151 (392)
Q Consensus 77 ~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~ 151 (392)
+|+++. +++...++.+.+||+.+++.......+...+.++|+|+++++++.+ +.|++||+.++.. .....+
T Consensus 118 s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~----~~l~~~ 193 (582)
T 3o4h_A 118 VDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL----RVFDSG 193 (582)
T ss_dssp EECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC----EEECCS
T ss_pred CCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc----eEeecC
Confidence 888863 3444455556699999987655444444889999999999988776 7899999875432 233467
Q ss_pred ccceEEEEEEcCCCEEEEeeCCC--cEEEEEcCCCeEEEEEecCCCceeEEE--------EecCCCcEEEEecCCCeEEE
Q psy17243 152 SEEITCFTVTWDSQYLITGSRDM--SLKVWQVVGGKLAQVLVGHTDHVSCVA--------VAVTNKSLVVSGSKDSNLIV 221 (392)
Q Consensus 152 ~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~l~~~~~dg~i~i 221 (392)
...+..++|+|||++|+++..++ .|++||+.+++.. .+..|...+..++ |+| ++.++++++.|+.+++
T Consensus 194 ~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l 271 (582)
T 3o4h_A 194 EGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLP-DGRLAVVARREGRSAV 271 (582)
T ss_dssp SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECT-TSCEEEEEEETTEEEE
T ss_pred CCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcC-CCcEEEEEEcCCcEEE
Confidence 77889999999999999888888 8999999998877 7777777777777 995 5589999999999999
Q ss_pred EECCCCceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 222 WDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 222 wd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
|++ ++... .+.+.+.+++|+ ||+++++..
T Consensus 272 ~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s 300 (582)
T 3o4h_A 272 FID--GERVE---APQGNHGRVVLW-RGKLVTSHT 300 (582)
T ss_dssp EET--TEEEC---CCSSEEEEEEEE-TTEEEEEEE
T ss_pred EEE--CCeec---cCCCceEEEEec-CCEEEEEEc
Confidence 999 66544 234678899999 999887754
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=7.2e-20 Score=159.54 Aligned_cols=226 Identities=16% Similarity=0.178 Sum_probs=158.1
Q ss_pred cCCeEEEEECCCcc--ceeeeccCCcCeeEEEecCCCCeEEEEe-CCCeEEEEeCCC-Cc--eeEEecc---------cc
Q psy17243 4 MDCLVNVWQMNSHE--LQSTMEGHLNTVSCVAISPNSIFAVSGS-EDNTAKVWGLTL-GS--VVSTFKS---------HQ 68 (392)
Q Consensus 4 ~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~v~iwd~~~-~~--~~~~~~~---------~~ 68 (392)
.++.|++|++.+++ .+..+..+...+..++|+|++++|++++ .++.|.+|++.. +. .+..+.. +.
T Consensus 61 ~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~ 140 (347)
T 3hfq_A 61 DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDG 140 (347)
T ss_dssp TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSS
T ss_pred CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccC
Confidence 36899999997665 4444455788899999999999888887 679999999963 32 2333321 11
Q ss_pred cceEEEEEecCCCEEEEEeCCCeEEEEEcC-Cceeee--e--c--ccceeEEEEeCCCCEEEE-ecCCCcEEEEeCCCCC
Q psy17243 69 STILAVAVLSDSRRVVTSDKAGVIAVWVAD-NAQLLY--S--A--LGPSKCLTVTHNMKYIVS-GDGDNSLRIWPTSPQT 140 (392)
Q Consensus 69 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~--~--~--~~~~~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~ 140 (392)
..+.+++|+|+++.+++...++.|.+|++. +++... . . ......++|+|+++++++ ...++.|.+|++....
T Consensus 141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 220 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT 220 (347)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 248899999999966666678899999998 454321 1 1 124567999999996666 5668899999987421
Q ss_pred CCC-cceeeecc------ccceEEEEEEcCCCEEEE-eeCCCcEEEEEcC---CCeEEEEEecCCCceeEEEEecCCCcE
Q psy17243 141 HKD-DERFTVSH------SEEITCFTVTWDSQYLIT-GSRDMSLKVWQVV---GGKLAQVLVGHTDHVSCVAVAVTNKSL 209 (392)
Q Consensus 141 ~~~-~~~~~~~~------~~~v~~~~~~~~~~~l~~-~~~dg~i~i~d~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~ 209 (392)
... ........ ...+..++|+|++++|++ ...++.|.+|++. ..+.+..+..+...+..++|+ +++++
T Consensus 221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~s-pdg~~ 299 (347)
T 3hfq_A 221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLD-PTEAF 299 (347)
T ss_dssp TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEEC-TTSSE
T ss_pred CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEEC-CCCCE
Confidence 111 11111111 145888999999998754 5568999999997 335566666666778999999 56666
Q ss_pred EEEec-CCCeEEEE--ECCCCcee
Q psy17243 210 VVSGS-KDSNLIVW--DMETGGEE 230 (392)
Q Consensus 210 l~~~~-~dg~i~iw--d~~~~~~~ 230 (392)
|++++ .++.|.+| |..+++..
T Consensus 300 l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 300 VVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEEEcCCCcEEEEEEeCCCCeEE
Confidence 55555 56899999 55566654
No 158
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=3.7e-21 Score=172.03 Aligned_cols=198 Identities=12% Similarity=0.056 Sum_probs=153.7
Q ss_pred CeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCce----------e--------eeecccc
Q psy17243 48 NTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQ----------L--------LYSALGP 109 (392)
Q Consensus 48 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----------~--------~~~~~~~ 109 (392)
+.+++|+... . .....++.+++++++.++++++.++ +++|+..... . ...+...
T Consensus 23 ~~vri~~~~~-~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-E------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-S------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-c------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 4688876431 1 1344678899999999999999888 8888753210 0 1112346
Q ss_pred eeEEEEeCCCCEEE----EecCCCcEEEEeCCCC-----CC---CCcceeeeccccceEEEEEEcC-CCEEEEeeCCCcE
Q psy17243 110 SKCLTVTHNMKYIV----SGDGDNSLRIWPTSPQ-----TH---KDDERFTVSHSEEITCFTVTWD-SQYLITGSRDMSL 176 (392)
Q Consensus 110 ~~~~~~~~~~~~l~----~~~~d~~i~~~d~~~~-----~~---~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i 176 (392)
+.+++|+|++++|+ +++.|+.|++||+... .. ........+|...|.+++|+|+ +++|++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 89999999999999 7888999999998643 11 1112334468899999999998 8899999999999
Q ss_pred EEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccc-------ccceeEEEEcCCC
Q psy17243 177 KVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGH-------LGCVTCVKLAGDG 249 (392)
Q Consensus 177 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~dg 249 (392)
++||++++..+....+|...|.+++|+ +++.+|++|+.||.|++||++ ++....+..| ...|.++.|++++
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~ws-pdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~ 252 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCWS-PKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTY 252 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEEC-TTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETT
T ss_pred EEEEcCCCcceeeccCCCCceeEEEEc-CCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCc
Confidence 999999998777777899999999999 568899999999999999998 5555555433 3389999999999
Q ss_pred eEEEEc
Q psy17243 250 TVAMSD 255 (392)
Q Consensus 250 ~~~~~~ 255 (392)
.+++..
T Consensus 253 ~~l~~~ 258 (434)
T 2oit_A 253 VFAIVY 258 (434)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 888553
No 159
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=1.4e-19 Score=157.97 Aligned_cols=241 Identities=11% Similarity=0.099 Sum_probs=173.9
Q ss_pred cCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEe----------CCCeEEEEeCCCCceeEEeccc------
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGS----------EDNTAKVWGLTLGSVVSTFKSH------ 67 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~dg~v~iwd~~~~~~~~~~~~~------ 67 (392)
.|+.|.+||..+++.+..+..+..+ .++|+|++++++++. .++.|.+||..+++.+.++...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999999888877666 899999999999886 3678999999999988887643
Q ss_pred ccceEEEEEecCCCEEEEEeC--CCeEEEEEcCCceeeee-cccce-eEEEEeCCC-CEEEEecCCCcEEEEeCCC----
Q psy17243 68 QSTILAVAVLSDSRRVVTSDK--AGVIAVWVADNAQLLYS-ALGPS-KCLTVTHNM-KYIVSGDGDNSLRIWPTSP---- 138 (392)
Q Consensus 68 ~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~-~~~~~~~~~-~~l~~~~~d~~i~~~d~~~---- 138 (392)
......++++|++++|+++.. ++.|.+||+.+++.+.. ...+. ..+.+.|++ ..+++.+.||.+.+|+...
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~ 186 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKV 186 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSE
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcE
Confidence 234667999999999998874 58999999999988776 43211 112333332 3344444444444444322
Q ss_pred --------------------------------------------CCCCCcceeee-c----c----ccceEEEEEEcCCC
Q psy17243 139 --------------------------------------------QTHKDDERFTV-S----H----SEEITCFTVTWDSQ 165 (392)
Q Consensus 139 --------------------------------------------~~~~~~~~~~~-~----~----~~~v~~~~~~~~~~ 165 (392)
........... . . ......++|+|+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~ 266 (361)
T 2oiz_A 187 ASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG 266 (361)
T ss_dssp EEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTT
T ss_pred eeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCC
Confidence 10000000000 0 0 00111268899988
Q ss_pred EEEEeeC-----------CCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCC--ceeee
Q psy17243 166 YLITGSR-----------DMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG--GEEHF 232 (392)
Q Consensus 166 ~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~ 232 (392)
.++++.. .+.|.+||+.+++.+..+..+. +..++|+ +++++|++++. +.|.+||..++ +.+..
T Consensus 267 ~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~s-pdg~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 267 RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTID-QQRNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEE-TTTTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEEC-CCCCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 8887643 3489999999999999998776 8999999 56668887776 99999999999 98888
Q ss_pred ecccccceeEEEEcCCCe
Q psy17243 233 LAGHLGCVTCVKLAGDGT 250 (392)
Q Consensus 233 ~~~~~~~v~~~~~~~dg~ 250 (392)
+..+......++++|||.
T Consensus 343 i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 343 IEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ETTSCSSEEEEEECCCSC
T ss_pred eccCCCCcEEEEecCCCC
Confidence 876777888999999985
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=6.6e-20 Score=159.73 Aligned_cols=218 Identities=11% Similarity=0.044 Sum_probs=165.6
Q ss_pred EEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccc-cceEEEEEecCCCEEEE-EeCCCeEEEEEcCCceeeeeccc
Q psy17243 31 CVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQ-STILAVAVLSDSRRVVT-SDKAGVIAVWVADNAQLLYSALG 108 (392)
Q Consensus 31 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~ 108 (392)
.+++++++.++++++.++.|.+||+.+++.+..+..+. ..+..++|+|+++++++ ...++.|.+||+.+++.+.....
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45678888899999999999999999999888887443 25788999999987654 45689999999999887655432
Q ss_pred ---------ceeEEEEeCCCCEEEEecCC------------CcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEE
Q psy17243 109 ---------PSKCLTVTHNMKYIVSGDGD------------NSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYL 167 (392)
Q Consensus 109 ---------~~~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 167 (392)
.+..++++|+++++++++.+ +.|.+||+.++......... .+...+.+++|+|+++ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCCCc-E
Confidence 15789999999999998865 89999999754333333322 3345688999999999 6
Q ss_pred EEeeCCCcEEEEEcCCCeEEEEEecCC-----------------------------------------------------
Q psy17243 168 ITGSRDMSLKVWQVVGGKLAQVLVGHT----------------------------------------------------- 194 (392)
Q Consensus 168 ~~~~~dg~i~i~d~~~~~~~~~~~~~~----------------------------------------------------- 194 (392)
++++. .|.+||+.+++.+..+..+.
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 66543 49999999988776664331
Q ss_pred ---------------CceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEc
Q psy17243 195 ---------------DHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 195 ---------------~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
..+..++++|.++.+++++ ++.|.+||+.+++.+..+.. ...+.+++|+|||+.++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEE
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEe
Confidence 1234566674267777777 88999999999988777753 3457899999999877764
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=2.3e-20 Score=174.18 Aligned_cols=223 Identities=12% Similarity=0.079 Sum_probs=164.4
Q ss_pred CCcCeeEEEecCCCCeEEEEeC-CCeEEEEeCCCCceeEEecccc-cceEEEEEecCCCEEEEEeC---CCeEEEE--Ec
Q psy17243 25 HLNTVSCVAISPNSIFAVSGSE-DNTAKVWGLTLGSVVSTFKSHQ-STILAVAVLSDSRRVVTSDK---AGVIAVW--VA 97 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d~~i~iw--d~ 97 (392)
+..+|++++|+|||++||+++. ||+++||+++.++..+ +..+. ..+..++|+|+ +.+++++. +....+| +.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 4568999999999999999887 9999999997665544 44454 68999999999 77777765 4545565 44
Q ss_pred --CCceeeeecccceeEEEEeCCCCE-EEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCC-
Q psy17243 98 --DNAQLLYSALGPSKCLTVTHNMKY-IVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRD- 173 (392)
Q Consensus 98 --~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 173 (392)
................+++|+++. +++...++.+.+||+.++.. .... .+.. .+++|+|||++|++++.+
T Consensus 98 ~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~---~~l~-~~~~--~~~~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 98 SRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL---RELA-RLPG--FGFVSDIRGDLIAGLGFFG 171 (582)
T ss_dssp TSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE---EEEE-EESS--CEEEEEEETTEEEEEEEEE
T ss_pred cCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE---EEee-cCCC--ceEEECCCCCEEEEEEEcC
Confidence 333332222223456788888863 33444455566999874422 2222 2222 788999999999988776
Q ss_pred ---CcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCC--eEEEEECCCCceeeeecccccceeEEE----
Q psy17243 174 ---MSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDS--NLIVWDMETGGEEHFLAGHLGCVTCVK---- 244 (392)
Q Consensus 174 ---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~---- 244 (392)
+.|++||+.+++.. .+..|...+..++|+ ++++.|+++..++ .|++||+.+++.. .+..|...+..++
T Consensus 172 ~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 172 GGRVSLFTSNLSSGGLR-VFDSGEGSFSSASIS-PGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp TTEEEEEEEETTTCCCE-EECCSSCEEEEEEEC-TTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred CCCeEEEEEcCCCCCce-EeecCCCccccceEC-CCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 78999999888754 667788889999999 6778888888888 8999999998887 7777777777777
Q ss_pred ----EcCCCeEEEEcCCC
Q psy17243 245 ----LAGDGTVAMSDLPP 258 (392)
Q Consensus 245 ----~~~dg~~~~~~~~~ 258 (392)
|+|||.++++...+
T Consensus 249 ~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp EEEEECTTSCEEEEEEET
T ss_pred cceeEcCCCcEEEEEEcC
Confidence 99999887776544
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=1.3e-20 Score=180.38 Aligned_cols=224 Identities=8% Similarity=-0.008 Sum_probs=160.4
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccc-----eEEEEEecCCCEEEEEeCC---------Ce
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQST-----ILAVAVLSDSRRVVTSDKA---------GV 91 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------~~ 91 (392)
.....++.|+|++++++++ |+.|++||+.+++....+..|... ...+.|+|||++|+.++.+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3456789999999988886 899999999999988777776533 2447899999999998876 56
Q ss_pred EEEEEcCCceeee--ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeecccc----------------
Q psy17243 92 IAVWVADNAQLLY--SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSE---------------- 153 (392)
Q Consensus 92 i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~---------------- 153 (392)
+.+||+.+++... .....+...+|+|||+.|+.+ .++.|++|++..+..... ...++..
T Consensus 94 ~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~l--t~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 94 YDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRI--TWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEEC--CSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEE--cCCCCccceecCcccccccchhc
Confidence 7799999997654 234567899999999999988 468999999875432211 1111111
Q ss_pred -ceEEEEEEcCCCEEEEeeCCC------------------------------------cEEEEEcCC---Ce--EEEEEe
Q psy17243 154 -EITCFTVTWDSQYLITGSRDM------------------------------------SLKVWQVVG---GK--LAQVLV 191 (392)
Q Consensus 154 -~v~~~~~~~~~~~l~~~~~dg------------------------------------~i~i~d~~~---~~--~~~~~~ 191 (392)
....+.|+|||++|+..+.|. .|++||+.+ ++ ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 123588999999998875321 588899988 73 223333
Q ss_pred ------cCCCceeEEEEecCCCcEEEEec----CCCeEEEEECCCCc----ee--eee--ccccccee-----EEEEcCC
Q psy17243 192 ------GHTDHVSCVAVAVTNKSLVVSGS----KDSNLIVWDMETGG----EE--HFL--AGHLGCVT-----CVKLAGD 248 (392)
Q Consensus 192 ------~~~~~v~~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~----~~--~~~--~~~~~~v~-----~~~~~~d 248 (392)
+|...+..++|+| ++++++... .+..|++||+.+++ +. ..+ ..|...|. ...|+||
T Consensus 251 ~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred CCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 3777899999995 566555432 23479999999887 22 222 34555544 7899999
Q ss_pred CeEEE-Ec
Q psy17243 249 GTVAM-SD 255 (392)
Q Consensus 249 g~~~~-~~ 255 (392)
|+.++ +.
T Consensus 330 G~~l~~~~ 337 (740)
T 4a5s_A 330 GNSFYKII 337 (740)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 99776 54
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=4.2e-19 Score=155.68 Aligned_cols=249 Identities=8% Similarity=0.000 Sum_probs=167.7
Q ss_pred CeEEEEEC--CCccceee--ec-cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCC-CCceeEEeccc-ccceEEEEEec
Q psy17243 6 CLVNVWQM--NSHELQST--ME-GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLT-LGSVVSTFKSH-QSTILAVAVLS 78 (392)
Q Consensus 6 g~i~vwd~--~~~~~~~~--~~-~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~-~~~v~~~~~~~ 78 (392)
+.|.+|++ .++++... .. .+...+..++|+|++++|++++.+ .|.+|++. +++........ .+...+++|+|
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp 92 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT 92 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC
Confidence 56888765 45554322 11 234568899999999999998887 99999997 77765433211 12345688999
Q ss_pred CCCE--EEEEe-------------CCCeEEEEEcC-Cceeeee-------cccceeEEEEeCCCCEEEEecC-CCcEEEE
Q psy17243 79 DSRR--VVTSD-------------KAGVIAVWVAD-NAQLLYS-------ALGPSKCLTVTHNMKYIVSGDG-DNSLRIW 134 (392)
Q Consensus 79 ~~~~--l~~~~-------------~d~~i~iwd~~-~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~-d~~i~~~ 134 (392)
++++ ++++. .++.+.+|++. +++.... ....+.+++|+|++++++++.. ++.|++|
T Consensus 93 dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~ 172 (365)
T 1jof_A 93 NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTH 172 (365)
T ss_dssp CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEE
Confidence 9985 44543 68999999997 4544322 2246789999999998887654 6899999
Q ss_pred eCC-CCCCCCcceeee-ccccceEEEEEEcCCCEEEEeeC-CCcEEEEEcC--CCeEE---EEEec-------CCC----
Q psy17243 135 PTS-PQTHKDDERFTV-SHSEEITCFTVTWDSQYLITGSR-DMSLKVWQVV--GGKLA---QVLVG-------HTD---- 195 (392)
Q Consensus 135 d~~-~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~---~~~~~-------~~~---- 195 (392)
++. +++......... .+...+..++|+|++++|++++. ++.|.+|++. +++.. ..+.. |..
T Consensus 173 ~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 252 (365)
T 1jof_A 173 RKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGK 252 (365)
T ss_dssp EECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSS
T ss_pred EECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccc
Confidence 997 332211111111 13567899999999999888775 6899999875 45542 22221 122
Q ss_pred --ceeEEE-EecCCCcEEEEecCC-C-----eEEEEECC-CCceee---eecccccceeEEEEcC---CCeEEEEcC
Q psy17243 196 --HVSCVA-VAVTNKSLVVSGSKD-S-----NLIVWDME-TGGEEH---FLAGHLGCVTCVKLAG---DGTVAMSDL 256 (392)
Q Consensus 196 --~v~~~~-~~~~~~~~l~~~~~d-g-----~i~iwd~~-~~~~~~---~~~~~~~~v~~~~~~~---dg~~~~~~~ 256 (392)
.+..++ |+ +++++|++++.+ . .|.+|++. +++... ....+......++|+| ||++++...
T Consensus 253 ~~~~~~i~~~s-pdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 253 GLYRADVCALT-FSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp BSEEEEEEEEC-TTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred ccccccEEEEC-CCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 478899 99 566666655432 2 89999996 566443 2333455677899999 899888764
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=6.7e-18 Score=147.90 Aligned_cols=238 Identities=10% Similarity=0.133 Sum_probs=159.0
Q ss_pred CCeEEEEECCC--ccc--eeeeccCCcCeeEEEecCCCCeEEEEe-CCCeEEEEeCCCCceeEEec------c-------
Q psy17243 5 DCLVNVWQMNS--HEL--QSTMEGHLNTVSCVAISPNSIFAVSGS-EDNTAKVWGLTLGSVVSTFK------S------- 66 (392)
Q Consensus 5 dg~i~vwd~~~--~~~--~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~------~------- 66 (392)
++.|.+|++.. ++. +.....+......+++ ++++|++++ .++.|.+|++.....+..+. +
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 151 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKER 151 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTT
T ss_pred CCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccc
Confidence 48999998865 432 3334445566777888 777777665 57899999997543332211 1
Q ss_pred -cccceEEEEEecCCCEEEEEe-CCCeEEEEEcCCcee------e--------ee--cccceeEEEEeCCCCEEEEec-C
Q psy17243 67 -HQSTILAVAVLSDSRRVVTSD-KAGVIAVWVADNAQL------L--------YS--ALGPSKCLTVTHNMKYIVSGD-G 127 (392)
Q Consensus 67 -~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~------~--------~~--~~~~~~~~~~~~~~~~l~~~~-~ 127 (392)
+...+.+++|+|+++++++++ .++.|.+|++..... + .. .......++|+|+++++++++ .
T Consensus 152 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 152 QTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp CSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred cCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC
Confidence 123358899999999776665 478999998875431 1 11 123457899999999887777 6
Q ss_pred CCcEEEEeCCCCCCCCccee--eeccccceEEEEEEcCCCEEEEeeCC--CcEEEEEcC--CCe--EEEEEecCCCceeE
Q psy17243 128 DNSLRIWPTSPQTHKDDERF--TVSHSEEITCFTVTWDSQYLITGSRD--MSLKVWQVV--GGK--LAQVLVGHTDHVSC 199 (392)
Q Consensus 128 d~~i~~~d~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~--~~~--~~~~~~~~~~~v~~ 199 (392)
++.|.+|++..+........ ...+......++|+||+++|+++..+ +.|.+|++. +++ .+..+.. ...+..
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~ 310 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRN 310 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCE
T ss_pred CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCce
Confidence 89999999874322111111 11233456899999999998776654 899999995 444 4444544 557789
Q ss_pred EEEecCCCcEEEEec-CCCeEEEEE--CCCCceeeeec-ccccceeEEEEc
Q psy17243 200 VAVAVTNKSLVVSGS-KDSNLIVWD--METGGEEHFLA-GHLGCVTCVKLA 246 (392)
Q Consensus 200 ~~~~~~~~~~l~~~~-~dg~i~iwd--~~~~~~~~~~~-~~~~~v~~~~~~ 246 (392)
++|+ +++++|++++ .++.|.+|+ ..+++...... .+...+.|+.|.
T Consensus 311 ~~~s-pdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 311 FIIT-PNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEC-TTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEC-CCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 9999 5666555555 679999964 45666554432 244568888875
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=2.8e-18 Score=151.78 Aligned_cols=245 Identities=11% Similarity=-0.028 Sum_probs=169.6
Q ss_pred eEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEE--EecCCCEEE
Q psy17243 7 LVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVA--VLSDSRRVV 84 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~ 84 (392)
.|.+||+.+++......++...+..+.|+|+++.|+.++.++.|++||+.+++....+..+...+.... ++|+++.++
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeec
Confidence 588899999888777777777777789999999999999999999999999988776665655554444 478998887
Q ss_pred EE----------------------eCCCeEEEEEcCCceeee--ecccceeEEEEeC-CCCEEEEecCC------CcEEE
Q psy17243 85 TS----------------------DKAGVIAVWVADNAQLLY--SALGPSKCLTVTH-NMKYIVSGDGD------NSLRI 133 (392)
Q Consensus 85 ~~----------------------~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~-~~~~l~~~~~d------~~i~~ 133 (392)
.. ..+..|.+||+.+++... .....+..+.|+| +++.|+....+ ..|.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~ 220 (388)
T 3pe7_A 141 GIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWL 220 (388)
T ss_dssp EEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEE
T ss_pred cccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEE
Confidence 43 234689999999886543 3334578899999 99988877653 37888
Q ss_pred EeCCCCCCCCcceeeeccc--cceEEEEEEcCCCEEEEeeC-CC----cEEEEEcCCCeEEE--EEecCCC---ceeEEE
Q psy17243 134 WPTSPQTHKDDERFTVSHS--EEITCFTVTWDSQYLITGSR-DM----SLKVWQVVGGKLAQ--VLVGHTD---HVSCVA 201 (392)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~~~--~~~~~~~---~v~~~~ 201 (392)
+|...... .... .+. ..+...+|+|||+.|+..+. ++ .|++||+.+++... .+.++.. ....+.
T Consensus 221 ~d~~~~~~---~~l~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 296 (388)
T 3pe7_A 221 INEDGTNM---RKVK-THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSL 296 (388)
T ss_dssp EETTSCCC---EESC-CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSE
T ss_pred EeCCCCce---EEee-eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCe
Confidence 88753322 1121 222 35778899999997755443 22 39999999887433 2322100 012236
Q ss_pred EecCCCcEEEEe--------cCCCeEEEEECCCCceeeeeccccc-----------ceeEEEEcCCCeEEEEcC
Q psy17243 202 VAVTNKSLVVSG--------SKDSNLIVWDMETGGEEHFLAGHLG-----------CVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 202 ~~~~~~~~l~~~--------~~dg~i~iwd~~~~~~~~~~~~~~~-----------~v~~~~~~~dg~~~~~~~ 256 (392)
|+|.+..++++. ..+..|++||+.+++. ..+..+.. .+..++|+|||+.+++..
T Consensus 297 ~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 297 MVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp EEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred EccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEe
Confidence 885444444332 4567899999998765 44544544 578899999999888754
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=3.8e-17 Score=141.01 Aligned_cols=230 Identities=11% Similarity=0.052 Sum_probs=171.9
Q ss_pred CcCeeEEEecCCCCeEEEEeCC------------------------CeEEEEeCCCCceeEEec-ccccceEEEEEecCC
Q psy17243 26 LNTVSCVAISPNSIFAVSGSED------------------------NTAKVWGLTLGSVVSTFK-SHQSTILAVAVLSDS 80 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~d------------------------g~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 80 (392)
-+.+.+++++|+|+++++...+ +.|.+||..+++.+..+. .+-.....++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999988888777 479999999998877665 344578999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCce-eeeecc------------cceeEEEEeC-CCCEEEEec-CCCcEEEEeCCCCCCCCcc
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQ-LLYSAL------------GPSKCLTVTH-NMKYIVSGD-GDNSLRIWPTSPQTHKDDE 145 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~-~~~~~~------------~~~~~~~~~~-~~~~l~~~~-~d~~i~~~d~~~~~~~~~~ 145 (392)
+.+++...++.|++||..... .+..+. .....++++| ++..+++.+ .++.|++|+... ......
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-KFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-CEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-CEEEEe
Confidence 988888889999999987552 333221 2467899999 788777775 699999999532 111111
Q ss_pred eee-------eccccceEEEEEEcC-CCEEEEeeCCCcEEEEEcCCCeEEEEEe--cCCCceeEEEEecCCCcEEEEe--
Q psy17243 146 RFT-------VSHSEEITCFTVTWD-SQYLITGSRDMSLKVWQVVGGKLAQVLV--GHTDHVSCVAVAVTNKSLVVSG-- 213 (392)
Q Consensus 146 ~~~-------~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~-- 213 (392)
... ..+-.....++++|+ ++++++...++.|++||..+++.+..+. .+...+..++++| +..+.+.
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~ 259 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP--GFLFAVNGK 259 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET--TEEEEEECC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC--CEEEEeCCC
Confidence 000 012234789999998 6677777788999999998888888874 3556788899985 4333333
Q ss_pred -----cCCCeEEEEECCCCceeeeec---ccccceeEEEEcCCCeEEEEcCCC
Q psy17243 214 -----SKDSNLIVWDMETGGEEHFLA---GHLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 214 -----~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
..+..|++||..+++.+..+. .+......++++|||.+++++...
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSS
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCC
Confidence 344589999999999888873 566778999999999988887643
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=9.1e-18 Score=147.17 Aligned_cols=221 Identities=10% Similarity=0.086 Sum_probs=153.5
Q ss_pred eEEEEECC-CccceeeeccC-CcCeeEEEecCCCCe--EEEEe-------------CCCeEEEEeCC-CCceeEEec---
Q psy17243 7 LVNVWQMN-SHELQSTMEGH-LNTVSCVAISPNSIF--AVSGS-------------EDNTAKVWGLT-LGSVVSTFK--- 65 (392)
Q Consensus 7 ~i~vwd~~-~~~~~~~~~~h-~~~v~~~~~~~~~~~--l~~~~-------------~dg~v~iwd~~-~~~~~~~~~--- 65 (392)
.|.+|++. ++++....... .+...+++|+|++++ +++++ .+|.+.+|++. +++....+.
T Consensus 61 ~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~ 140 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE 140 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE
T ss_pred eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE
Confidence 79999997 77665433211 133667999999994 55553 68999999997 466554443
Q ss_pred -ccccceEEEEEecCCCEEEEEeC-CCeEEEEEcC-Cceee--eec-----ccceeEEEEeCCCCEEEEecC-CCcEEEE
Q psy17243 66 -SHQSTILAVAVLSDSRRVVTSDK-AGVIAVWVAD-NAQLL--YSA-----LGPSKCLTVTHNMKYIVSGDG-DNSLRIW 134 (392)
Q Consensus 66 -~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~-~~~~~--~~~-----~~~~~~~~~~~~~~~l~~~~~-d~~i~~~ 134 (392)
.+...+.+++|+|+|+++++++. ++.|++|++. +++.. ... ......++|+|+++++++++. ++.|.+|
T Consensus 141 ~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~ 220 (365)
T 1jof_A 141 YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEE
Confidence 24567899999999998887764 6899999998 66542 222 234678999999999888765 7899999
Q ss_pred eCCCCCCCCc-----ceeee----cccc------ceEEEE-EEcCCCEEEEeeCCC------cEEEEEcC-CCeEEE---
Q psy17243 135 PTSPQTHKDD-----ERFTV----SHSE------EITCFT-VTWDSQYLITGSRDM------SLKVWQVV-GGKLAQ--- 188 (392)
Q Consensus 135 d~~~~~~~~~-----~~~~~----~~~~------~v~~~~-~~~~~~~l~~~~~dg------~i~i~d~~-~~~~~~--- 188 (392)
++........ ..... ++.. .+..++ |+||+++|+++..+. .|.+|++. +++...
T Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~ 300 (365)
T 1jof_A 221 VIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF 300 (365)
T ss_dssp EECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEE
T ss_pred EEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeee
Confidence 8753211110 11110 1121 578999 999999988776432 89999996 565443
Q ss_pred EEecCCCceeEEEEecC--CCcEEEEecC-CCeEEEEECCCC
Q psy17243 189 VLVGHTDHVSCVAVAVT--NKSLVVSGSK-DSNLIVWDMETG 227 (392)
Q Consensus 189 ~~~~~~~~v~~~~~~~~--~~~~l~~~~~-dg~i~iwd~~~~ 227 (392)
....+...+..++|+|. ++++|++++. ++.|.+|+++..
T Consensus 301 ~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 301 LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 23335556778899964 6777777765 589999998765
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=1e-17 Score=158.81 Aligned_cols=249 Identities=13% Similarity=0.023 Sum_probs=173.5
Q ss_pred ccCCeEEEEECCCccceeeeccCCcCee---------EEEec--CCCCe-EEEEeC-CCeEEEEeCC--CCceeEEecc-
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEGHLNTVS---------CVAIS--PNSIF-AVSGSE-DNTAKVWGLT--LGSVVSTFKS- 66 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-l~~~~~-dg~v~iwd~~--~~~~~~~~~~- 66 (392)
+.++...||....+.....+..|...+. ...|+ ||+++ |+.++. +..|.++++. .......+..
T Consensus 44 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~ 123 (662)
T 3azo_A 44 AEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPV 123 (662)
T ss_dssp TTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCC
T ss_pred ccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCC
Confidence 4577899998655555667777776666 66666 99998 776654 5667777765 2033445554
Q ss_pred ----cccceEEEEEecCCCEEEEEeCC----------CeEEEEEcCC------ceeeeec---ccceeEEEEeCCCCEEE
Q psy17243 67 ----HQSTILAVAVLSDSRRVVTSDKA----------GVIAVWVADN------AQLLYSA---LGPSKCLTVTHNMKYIV 123 (392)
Q Consensus 67 ----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~iwd~~~------~~~~~~~---~~~~~~~~~~~~~~~l~ 123 (392)
|...+..++|+|||+.|++++.+ ..|++||+.+ ++..... ...+..+.|+|||++|+
T Consensus 124 ~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la 203 (662)
T 3azo_A 124 SAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAV 203 (662)
T ss_dssp CCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEE
T ss_pred ccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEE
Confidence 56788999999999999998876 5899999988 5443322 23566789999999999
Q ss_pred EecCC--------CcEEEEeCC-CCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCC--cEEEEEcCCCeEEEEEec
Q psy17243 124 SGDGD--------NSLRIWPTS-PQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDM--SLKVWQVVGGKLAQVLVG 192 (392)
Q Consensus 124 ~~~~d--------~~i~~~d~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~ 192 (392)
.++.+ ..|++||+. ++...........+...+..+.|+||+++++++..++ .|.+||+.+++.......
T Consensus 204 ~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 204 WLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC
T ss_pred EEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccc
Confidence 87754 379999997 2311122333334567899999999999888888888 677777766665443333
Q ss_pred CCCc--------eeEEEEecCCCcEEEEecCCCeEEEE--ECCCCceeeeecccccceeEE-EEcCCCeEEEE
Q psy17243 193 HTDH--------VSCVAVAVTNKSLVVSGSKDSNLIVW--DMETGGEEHFLAGHLGCVTCV-KLAGDGTVAMS 254 (392)
Q Consensus 193 ~~~~--------v~~~~~~~~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~v~~~-~~~~dg~~~~~ 254 (392)
+... +..++|+ +++.++++++. +.++|| |+.+++ +..+..+...+..+ +++++..+++.
T Consensus 284 ~~~~~~p~w~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~ 353 (662)
T 3azo_A 284 EEEFAGPLWTPGMRWFAPL-ANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVA 353 (662)
T ss_dssp SSBSSCCCCSTTCCSEEEC-TTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEE
T ss_pred cccccCccccccCceEeEe-CCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEE
Confidence 3222 4578888 67788888888 999999 655554 66777777777777 55554444443
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=8.1e-18 Score=161.15 Aligned_cols=247 Identities=10% Similarity=0.035 Sum_probs=168.5
Q ss_pred CCeEEEEECCCccceeeeccCCcC-----eeEEEecCCCCeEEEEeCC---------CeEEEEeCCCCceeEEecccccc
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNT-----VSCVAISPNSIFAVSGSED---------NTAKVWGLTLGSVVSTFKSHQST 70 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~~~~~d---------g~v~iwd~~~~~~~~~~~~~~~~ 70 (392)
|+.|++||+.+++....+.+|... ...+.|||||++|+.++.+ +.+.+||+++++.. .+..+...
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~ 113 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNN 113 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTT
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCc
Confidence 889999999999988777777643 2347889999999998876 56779999998765 45667788
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeecc-c--------------------ceeEEEEeCCCCEEEEecCCC
Q psy17243 71 ILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSAL-G--------------------PSKCLTVTHNMKYIVSGDGDN 129 (392)
Q Consensus 71 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~--------------------~~~~~~~~~~~~~l~~~~~d~ 129 (392)
+...+|+|||+.|+.+. ++.|++|++.+++..+... + ....+.|+|||+.|+....|.
T Consensus 114 ~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~ 192 (740)
T 4a5s_A 114 TQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND 192 (740)
T ss_dssp EEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred ceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcc
Confidence 99999999999998884 6899999998876543211 1 113488999999999875321
Q ss_pred ------------------------------------cEEEEeCCC---CCCCCcceeee-----ccccceEEEEEEcCCC
Q psy17243 130 ------------------------------------SLRIWPTSP---QTHKDDERFTV-----SHSEEITCFTVTWDSQ 165 (392)
Q Consensus 130 ------------------------------------~i~~~d~~~---~~~~~~~~~~~-----~~~~~v~~~~~~~~~~ 165 (392)
.|++||+.+ +.......... .+...+..++|+||++
T Consensus 193 ~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~ 272 (740)
T 4a5s_A 193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER 272 (740)
T ss_dssp TTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE
T ss_pred cCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe
Confidence 477888875 42112222221 2667789999999998
Q ss_pred EEEEeeC----CCcEEEEEcCCCe----EE--EEE--ecCCCcee-----EEEEecCCCcEEE-Eec-CC--CeEEEEEC
Q psy17243 166 YLITGSR----DMSLKVWQVVGGK----LA--QVL--VGHTDHVS-----CVAVAVTNKSLVV-SGS-KD--SNLIVWDM 224 (392)
Q Consensus 166 ~l~~~~~----dg~i~i~d~~~~~----~~--~~~--~~~~~~v~-----~~~~~~~~~~~l~-~~~-~d--g~i~iwd~ 224 (392)
.++.... +..|.+||+.+++ +. ..+ ..|...+. ...|+| ++..++ ..+ .+ ..|++||+
T Consensus 273 ~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp-DG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 273 ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL-DGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT-TSSEEEEEEECTTSCEEEEEEET
T ss_pred EEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC-CCCEEEEEEEcCCCceEEEEEEC
Confidence 6665432 3479999998886 21 122 34555554 688994 555444 444 44 45888998
Q ss_pred CCCceeeeecccccceeEEE-EcCCCeEEEEcC
Q psy17243 225 ETGGEEHFLAGHLGCVTCVK-LAGDGTVAMSDL 256 (392)
Q Consensus 225 ~~~~~~~~~~~~~~~v~~~~-~~~dg~~~~~~~ 256 (392)
.+++... +......+..+. ++ ++.++..+.
T Consensus 352 ~~~~~~~-lT~g~~~v~~~~~~d-~~~i~f~~~ 382 (740)
T 4a5s_A 352 DKKDCTF-ITKGTWEVIGIEALT-SDYLYYISN 382 (740)
T ss_dssp TCSSCEE-SCCSSSCEEEEEEEC-SSEEEEEES
T ss_pred CCCceEe-cccCCEEEEEEEEEe-CCEEEEEEe
Confidence 8766544 333344555544 33 344444443
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=3.1e-16 Score=135.69 Aligned_cols=242 Identities=10% Similarity=0.006 Sum_probs=171.2
Q ss_pred ccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCE
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRR 82 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 82 (392)
+.++.++.| .++....+..+...+.+++|+|++++++++..++.|.+||.++++.......+...+.+++++|++++
T Consensus 24 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l 100 (333)
T 2dg1_A 24 ISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRL 100 (333)
T ss_dssp CCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCE
T ss_pred eecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcE
Confidence 345667777 34455666667778899999999998778888999999999888766555446678999999999988
Q ss_pred EEEEeCC----CeEEEEEcCCceeeeec-----ccceeEEEEeCCCCEEEEecC------CCcEEEEeCCCCCCCCccee
Q psy17243 83 VVTSDKA----GVIAVWVADNAQLLYSA-----LGPSKCLTVTHNMKYIVSGDG------DNSLRIWPTSPQTHKDDERF 147 (392)
Q Consensus 83 l~~~~~d----~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~ 147 (392)
+++...+ +.|.+||..+++..... ...+..+.++|+++.+++... .+.|..+|..... ...
T Consensus 101 ~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~----~~~ 176 (333)
T 2dg1_A 101 FVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT----VTP 176 (333)
T ss_dssp EEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC----EEE
T ss_pred EEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE----EEE
Confidence 8777666 68999999887654221 235678999999987776653 3556666654221 111
Q ss_pred eeccccceEEEEEEcCCCEEEEe-eCCCcEEEEEcCC-CeEEEE--------EecCCCceeEEEEecCCCcEEEEecCCC
Q psy17243 148 TVSHSEEITCFTVTWDSQYLITG-SRDMSLKVWQVVG-GKLAQV--------LVGHTDHVSCVAVAVTNKSLVVSGSKDS 217 (392)
Q Consensus 148 ~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~-~~~~~~--------~~~~~~~v~~~~~~~~~~~~l~~~~~dg 217 (392)
.......+..++|+|+++.|+.+ ..++.|.+||+.+ ++.+.. +.++ ..+..++++ +++.++++...++
T Consensus 177 ~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d-~~G~l~v~~~~~~ 254 (333)
T 2dg1_A 177 IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCID-SDDNLYVAMYGQG 254 (333)
T ss_dssp EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEB-TTCCEEEEEETTT
T ss_pred eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEEC-CCCCEEEEEcCCC
Confidence 11233457889999999866544 5578999999964 332211 1112 367789999 6677777777789
Q ss_pred eEEEEECCCCceeeeeccccc------ceeEEEEcCCCeEEEE
Q psy17243 218 NLIVWDMETGGEEHFLAGHLG------CVTCVKLAGDGTVAMS 254 (392)
Q Consensus 218 ~i~iwd~~~~~~~~~~~~~~~------~v~~~~~~~dg~~~~~ 254 (392)
.|.+||. +++.+..+..+.. .+.+++|++|+..+..
T Consensus 255 ~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v 296 (333)
T 2dg1_A 255 RVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLII 296 (333)
T ss_dssp EEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred EEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEE
Confidence 9999998 5666666654433 6899999999855543
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.79 E-value=5.9e-17 Score=141.03 Aligned_cols=228 Identities=10% Similarity=0.067 Sum_probs=158.2
Q ss_pred cCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCC---C--eEEEEeCCCCceeEEecccccceEEEEEec
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSED---N--TAKVWGLTLGSVVSTFKSHQSTILAVAVLS 78 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---g--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 78 (392)
.++.|.+||+.+++.. .+ ..+..++|+|||++|+..+.+ + .|.+|++.+++....... .. +..+.|+|
T Consensus 41 ~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wsp 113 (347)
T 2gop_A 41 YENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNE 113 (347)
T ss_dssp EEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECT
T ss_pred ccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECC
Confidence 3678999999887643 33 568899999999999887654 3 488889888876655543 34 99999999
Q ss_pred CCCEEEEEeCC---------------------------CeEEEEEcCCceeeeecc-cceeEEEEeCCCCEEEEecCCC-
Q psy17243 79 DSRRVVTSDKA---------------------------GVIAVWVADNAQLLYSAL-GPSKCLTVTHNMKYIVSGDGDN- 129 (392)
Q Consensus 79 ~~~~l~~~~~d---------------------------~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~- 129 (392)
+++.|+.++.+ ..|++||+.+++.+..+. ..+..+.|+|++ .++++..+.
T Consensus 114 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~ 192 (347)
T 2gop_A 114 DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREI 192 (347)
T ss_dssp TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCS
T ss_pred CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecccc
Confidence 99998887632 579999998887622221 267788999999 777775542
Q ss_pred ------cEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCC--------CcEEEEEcCCCeEEEEEecCCC
Q psy17243 130 ------SLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRD--------MSLKVWQVVGGKLAQVLVGHTD 195 (392)
Q Consensus 130 ------~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~ 195 (392)
...+|.+..+. ..... .+ ..+..+ +|+|++|+.++.+ ..|.+|| +++.......+..
T Consensus 193 ~~~~~~~~~l~~~d~~~---~~~l~-~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~ 263 (347)
T 2gop_A 193 IPQYFKFWDIYIWEDGK---EEKMF-EK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDR 263 (347)
T ss_dssp SCCSSCCEEEEEEETTE---EEEEE-EE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCS
T ss_pred cccccccccEEEeCCCc---eEEec-cC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCc
Confidence 34455443211 11122 23 444444 9999988877643 4688888 5555444455667
Q ss_pred ceeE-EEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEc
Q psy17243 196 HVSC-VAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 196 ~v~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
.+.. +.|+ ++ ++++++.++.++|| +.+++.. .+..+...|.+++|+| .++++.
T Consensus 264 ~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~ 317 (347)
T 2gop_A 264 GVGQAKIKD--GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVDE--IVVYLK 317 (347)
T ss_dssp EEEEEEEET--TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEEESS--SEEEEE
T ss_pred ccCCccEEc--Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEeeeeeC--cEEEEE
Confidence 7876 8887 45 88888999999999 8766554 3444577899999999 444443
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=3.4e-16 Score=133.04 Aligned_cols=228 Identities=8% Similarity=-0.005 Sum_probs=168.9
Q ss_pred ccceeeeccCCcCeeEEEecCCCC-eEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy17243 16 HELQSTMEGHLNTVSCVAISPNSI-FAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAV 94 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 94 (392)
+..+..+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+...+.+++++++++.+++...++.|.+
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 344555666677788999999998 7788888999999999877 5666667778999999999998877777789999
Q ss_pred EEcCCceeeeecc-------cceeEEEEeCCCCEEEE----ec-------------CCCcEEEEeCCCCCCCCcceeeec
Q psy17243 95 WVADNAQLLYSAL-------GPSKCLTVTHNMKYIVS----GD-------------GDNSLRIWPTSPQTHKDDERFTVS 150 (392)
Q Consensus 95 wd~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~----~~-------------~d~~i~~~d~~~~~~~~~~~~~~~ 150 (392)
||..+++...... ..+..++++|+|+++++ ++ ..+.|..++.. ........
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-----g~~~~~~~ 169 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-----GTLSAPIR 169 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-----SCEEEEEC
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-----CCEEEeec
Confidence 9997776533211 13457999999998887 33 13456555543 12222334
Q ss_pred cccceEEEEEEcCCCEEEEeeCCCcEEEEEcC-CCeE---EEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCC
Q psy17243 151 HSEEITCFTVTWDSQYLITGSRDMSLKVWQVV-GGKL---AQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 151 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 226 (392)
+......++|+|+++.+++.+.++.|.+|++. +++. ...+..+...+..++++ ++++++++. ++.|.+||..
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVD-AGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEB-TTSCEEEEE--TTEEEEECTT-
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEEC-CCCCEEEEc--CCeEEEECCC-
Confidence 55667899999999988777778999999996 4544 23333345567789999 667766665 8899999986
Q ss_pred CceeeeecccccceeEEEE-cCCCeEEEEc
Q psy17243 227 GGEEHFLAGHLGCVTCVKL-AGDGTVAMSD 255 (392)
Q Consensus 227 ~~~~~~~~~~~~~v~~~~~-~~dg~~~~~~ 255 (392)
++.+..+..+.. +.+++| .|+++.+..+
T Consensus 246 g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~ 274 (296)
T 3e5z_A 246 GDELGRVLTPQT-TSNLCFGGPEGRTLYMT 274 (296)
T ss_dssp SCEEEEEECSSC-CCEEEEESTTSCEEEEE
T ss_pred CCEEEEEECCCC-ceeEEEECCCCCEEEEE
Confidence 788878877777 999999 5888766654
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=2.7e-18 Score=152.20 Aligned_cols=239 Identities=7% Similarity=-0.084 Sum_probs=158.6
Q ss_pred EEEECCCccceeeeccCCcC-----eeEEEecCCCCeEEEEeCC---CeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 9 NVWQMNSHELQSTMEGHLNT-----VSCVAISPNSIFAVSGSED---NTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 9 ~vwd~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
...|..+++.+..+..+... +..++|+|+|++|+..... ..|.+||+.+++.......+......+.|+|++
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg 92 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE 92 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC
Confidence 34577888877777765444 7889999999998876543 478889998887654443333223347899999
Q ss_pred CEEEEEeCCCeEEEEEcCCceeeeecc--cc-eeE-------------------EEEeCCCCEEEEe-----cCCCcEEE
Q psy17243 81 RRVVTSDKAGVIAVWVADNAQLLYSAL--GP-SKC-------------------LTVTHNMKYIVSG-----DGDNSLRI 133 (392)
Q Consensus 81 ~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~-~~~-------------------~~~~~~~~~l~~~-----~~d~~i~~ 133 (392)
+.|+.++.++.|++||+.+++...... .. ... ..++|+++.++.. ..+..|.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 999999999999999998876543222 11 111 2456677666554 35668999
Q ss_pred EeCCCCCCCCcceeeeccccceEEEEEEc-CCCEEEEeeCC------CcEEEEEcCCCeEEEEEecC--CCceeEEEEec
Q psy17243 134 WPTSPQTHKDDERFTVSHSEEITCFTVTW-DSQYLITGSRD------MSLKVWQVVGGKLAQVLVGH--TDHVSCVAVAV 204 (392)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~ 204 (392)
||+.++.. .....+...+..+.|+| +++.|+..+.+ ..|.+||+..++.. .+..+ ...+..++|+
T Consensus 173 ~d~~~g~~----~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~s- 246 (396)
T 3c5m_A 173 VDIETGEL----EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWI- 246 (396)
T ss_dssp EETTTCCE----EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEEC-
T ss_pred EECCCCcE----EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEEC-
Confidence 99875332 22224567788999999 78777665543 46889998765533 33323 2357788999
Q ss_pred CCCcEEEEecCC-----CeEEEEECCCCceeeeecccccceeEEEEcC-CCeEEEEcC
Q psy17243 205 TNKSLVVSGSKD-----SNLIVWDMETGGEEHFLAGHLGCVTCVKLAG-DGTVAMSDL 256 (392)
Q Consensus 205 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-dg~~~~~~~ 256 (392)
+++..|+.++.+ +.|++||+.+++....... . ... +.|+| ||++++...
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-P-PCS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-C-SEE-EEEECSSSSEEEEEE
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-C-CCC-CCccCCCCceEEEec
Confidence 455544444332 4599999988875432221 1 123 88999 999888743
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=7.5e-16 Score=130.21 Aligned_cols=224 Identities=18% Similarity=0.237 Sum_probs=165.2
Q ss_pred cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecc------cccceEEEEEe-cCCCEEEEEeC-CCeEEEE
Q psy17243 24 GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKS------HQSTILAVAVL-SDSRRVVTSDK-AGVIAVW 95 (392)
Q Consensus 24 ~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~l~~~~~-d~~i~iw 95 (392)
++-....+++++++++++++...++.|.+||.+ ++.+..+.. +...+..+++. ++++.+++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 456778999999999988888889999999977 666666542 33568899995 56655555433 8899999
Q ss_pred EcCCceeeeecc----cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeee-ccccceEEEEEEcCCCEEEEe
Q psy17243 96 VADNAQLLYSAL----GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTV-SHSEEITCFTVTWDSQYLITG 170 (392)
Q Consensus 96 d~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 170 (392)
| .+++.+..+. .....++++++++.+++...++.|.+||... ........ .+...+..++++++++++++.
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 9 5555554432 3567899999999888878889999999642 11111111 234568999999999877777
Q ss_pred eCCCcEEEEEcCCCeEEEEEecC--CCceeEEEEecCCCcEEEEecCCC-eEEEEECCCCceeeeeccccc--ceeEEEE
Q psy17243 171 SRDMSLKVWQVVGGKLAQVLVGH--TDHVSCVAVAVTNKSLVVSGSKDS-NLIVWDMETGGEEHFLAGHLG--CVTCVKL 245 (392)
Q Consensus 171 ~~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~--~v~~~~~ 245 (392)
..++.|++||. +++.+..+..+ ...+..++++ +++.++++...++ .|.+||. +++.+..+..+.. .+.++++
T Consensus 182 ~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d-~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~ 258 (286)
T 1q7f_A 182 NRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGIN-SNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVAL 258 (286)
T ss_dssp GGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEEC-TTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEE
T ss_pred CCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEEC-CCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEE
Confidence 77899999997 45566666433 3578899999 5678888887776 9999995 5666666654433 4779999
Q ss_pred cCCCeEEEEc
Q psy17243 246 AGDGTVAMSD 255 (392)
Q Consensus 246 ~~dg~~~~~~ 255 (392)
+|+|++++++
T Consensus 259 ~~~g~l~vs~ 268 (286)
T 1q7f_A 259 MDDGSVVLAS 268 (286)
T ss_dssp ETTTEEEEEE
T ss_pred CCCCcEEEEC
Confidence 9999988875
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=1.5e-17 Score=147.44 Aligned_cols=245 Identities=9% Similarity=-0.087 Sum_probs=163.5
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEE-----------
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILA----------- 73 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~----------- 73 (392)
+..|.+||+.+++......++......+.|+|++++|+.++.++.|.+||+.+++.......+......
T Consensus 59 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 138 (396)
T 3c5m_A 59 NRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTK 138 (396)
T ss_dssp SCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred CceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCc
Confidence 347888899887765444433333444889999999999999999999999988766555534332222
Q ss_pred --------EEEecCCCEEEEE-----eCCCeEEEEEcCCceeee--ecccceeEEEEeC-CCCEEEEecCC------CcE
Q psy17243 74 --------VAVLSDSRRVVTS-----DKAGVIAVWVADNAQLLY--SALGPSKCLTVTH-NMKYIVSGDGD------NSL 131 (392)
Q Consensus 74 --------~~~~~~~~~l~~~-----~~d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~-~~~~l~~~~~d------~~i 131 (392)
+.|+|+++.++.. ..+..|.+||+.+++... .....+..+.|+| ++..|+..+.+ ..|
T Consensus 139 ~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l 218 (396)
T 3c5m_A 139 LVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARM 218 (396)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCC
T ss_pred cccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceE
Confidence 2456666665543 356689999998876543 3334567889999 78877766543 468
Q ss_pred EEEeCCCCCCCCcceeeecc-ccceEEEEEEcCCCEEEEeeCC-----CcEEEEEcCCCeEEEEEecCCCceeEEEEecC
Q psy17243 132 RIWPTSPQTHKDDERFTVSH-SEEITCFTVTWDSQYLITGSRD-----MSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVT 205 (392)
Q Consensus 132 ~~~d~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 205 (392)
.+||+...... ...... ...+..++|+|++++|+..+.+ +.|++||+.+++...... .. ... +.|+|+
T Consensus 219 ~~~d~~~~~~~---~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~ 292 (396)
T 3c5m_A 219 WLVNEDGSNVR---KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNF 292 (396)
T ss_dssp EEEETTSCCCE---ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECS
T ss_pred EEEECCCCcee---EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCC
Confidence 88887633211 111111 3357889999999987766543 449999998886544332 22 233 889953
Q ss_pred CCcEEEEec----------------CCCeEEEEECCCCceeeeeccccc-----------ceeEEEEcCCCeEEEEcC
Q psy17243 206 NKSLVVSGS----------------KDSNLIVWDMETGGEEHFLAGHLG-----------CVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 206 ~~~~l~~~~----------------~dg~i~iwd~~~~~~~~~~~~~~~-----------~v~~~~~~~dg~~~~~~~ 256 (392)
++.+++.++ .+..|++||+.+++.. .+..+.. .+..++|+|||+.++...
T Consensus 293 dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 293 DGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp SSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred CCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEe
Confidence 677777644 3478999999887643 3444443 256789999999887754
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.77 E-value=7.3e-16 Score=128.95 Aligned_cols=225 Identities=10% Similarity=0.029 Sum_probs=168.6
Q ss_pred CCccCCeEEEEECCCccceeeeccCC-cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccc-cceEEEEEec
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGHL-NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQ-STILAVAVLS 78 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~ 78 (392)
+++.|+.|.+||.++++.+.++..+. ..+.++.++|+|++|+ +.++.|..||. +++.+.++..+. ..+.++.+.+
T Consensus 10 ~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~ 86 (276)
T 3no2_A 10 GGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILP 86 (276)
T ss_dssp ECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECT
T ss_pred eeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECC
Confidence 36789999999999999999998776 5789999999999888 35788999998 899998888653 5788999999
Q ss_pred CCCEEEEEeC-CCeEEEEEcCCceeeeecc---------cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceee
Q psy17243 79 DSRRVVTSDK-AGVIAVWVADNAQLLYSAL---------GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFT 148 (392)
Q Consensus 79 ~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 148 (392)
+|+.+++.+. ++.+..+|. +++.+.... .....+...++++++++...++.|..||.. ++.. ..+
T Consensus 87 dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~--w~~- 161 (276)
T 3no2_A 87 DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL--NSV- 161 (276)
T ss_dssp TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE--EEE-
T ss_pred CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE--EEE-
Confidence 9999999887 788888886 565554332 123456788999999999999999999986 3222 112
Q ss_pred eccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCC------CceeEEEEecCCCcEEEEecCC------
Q psy17243 149 VSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHT------DHVSCVAVAVTNKSLVVSGSKD------ 216 (392)
Q Consensus 149 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~l~~~~~d------ 216 (392)
.....+.++...++++.++++..++.|..+|..+++.+.++..+. ..+..++.. +++.++++....
T Consensus 162 -~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~-~~G~i~v~~~~g~~~~~~ 239 (276)
T 3no2_A 162 -KLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL-QNGGLYICNWQGHDREAG 239 (276)
T ss_dssp -ECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC-TTSCEEEEEECTTCTTGG
T ss_pred -ECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEc-CCCCEEEEeccCcccccc
Confidence 222445667788999999999888899999999999998886442 125677777 567777765321
Q ss_pred --CeEEEEEC-CCCceeeeecc
Q psy17243 217 --SNLIVWDM-ETGGEEHFLAG 235 (392)
Q Consensus 217 --g~i~iwd~-~~~~~~~~~~~ 235 (392)
+..+++++ .+++.+.++..
T Consensus 240 ~~~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 240 KGKHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp GSCCCSEEEECTTSBEEEEECC
T ss_pred ccCCceEEEECCCCCEEEEecC
Confidence 13345555 35666555543
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=3e-15 Score=137.28 Aligned_cols=248 Identities=10% Similarity=0.042 Sum_probs=183.2
Q ss_pred ccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCC--CCceeEEecccccceEEEEEe---
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLT--LGSVVSTFKSHQSTILAVAVL--- 77 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~--- 77 (392)
..++.|.++|..+++.+..+.. ...+..+.|+|+++++++++.|+.|.+||+. +++.+.++.... ....++|+
T Consensus 174 ~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~ 251 (567)
T 1qks_A 174 RDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKME 251 (567)
T ss_dssp TTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCST
T ss_pred CCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEcccc
Confidence 4578999999999999988874 3456799999999999999999999999996 888888887533 45799999
Q ss_pred -cCCCEEEEEeC-CCeEEEEEcCCceeeeeccc--------------ceeEEEEeCCCCE-EEEecCCCcEEEEeCCCCC
Q psy17243 78 -SDSRRVVTSDK-AGVIAVWVADNAQLLYSALG--------------PSKCLTVTHNMKY-IVSGDGDNSLRIWPTSPQT 140 (392)
Q Consensus 78 -~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~--------------~~~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~ 140 (392)
|+|+++++++. ++.+.++|..+.+.+..... .+..+..++++.. ++....+|.|.++|.....
T Consensus 252 ~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~ 331 (567)
T 1qks_A 252 GWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN 331 (567)
T ss_dssp TCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS
T ss_pred CCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc
Confidence 69998887765 48999999999887765431 2346677776554 4445567999999986432
Q ss_pred CCCcceeeeccccceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEec-----CCCceeEEE-EecCCCcEEEEe
Q psy17243 141 HKDDERFTVSHSEEITCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVG-----HTDHVSCVA-VAVTNKSLVVSG 213 (392)
Q Consensus 141 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-----~~~~v~~~~-~~~~~~~~l~~~ 213 (392)
... ............+.|+|++++++++. .++.|.++|+.+++.+..+.. |.+ .... ++|..+.+++++
T Consensus 332 ~~~--v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t~ 407 (567)
T 1qks_A 332 NLK--TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPG--RGANFVHPTFGPVWATS 407 (567)
T ss_dssp EEE--EEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCT--TCEEEEETTTEEEEEEE
T ss_pred cce--eeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCc--cceeeECCCCCcEEEeC
Confidence 211 11223345667889999999987766 578999999999988776653 322 2233 454446666655
Q ss_pred c-CCCeEEEEECCC-------CceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 214 S-KDSNLIVWDMET-------GGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 214 ~-~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
. .++.|.++|..+ .+.+..+......-..+..+|+++++..+.
T Consensus 408 ~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 408 HMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp BSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred CCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 4 468999999987 567777776544445577899999888764
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=2.5e-16 Score=135.87 Aligned_cols=219 Identities=9% Similarity=0.094 Sum_probs=162.5
Q ss_pred CCeEEEEECCCccceeeec-cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc-eeEEe---------cccccceEE
Q psy17243 5 DCLVNVWQMNSHELQSTME-GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS-VVSTF---------KSHQSTILA 73 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~---------~~~~~~v~~ 73 (392)
++.|.+||..+++....+. ++-.....++++|+++++++...++.|++||.+... .+..+ ..+-.....
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred CCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence 3689999999888877664 355678999999999988888889999999976442 45555 233446899
Q ss_pred EEEec-CCCEEEEEe-CCCeEEEEEcCCceeeeecc-------------cceeEEEEeCC-CCEEEEecCCCcEEEEeCC
Q psy17243 74 VAVLS-DSRRVVTSD-KAGVIAVWVADNAQLLYSAL-------------GPSKCLTVTHN-MKYIVSGDGDNSLRIWPTS 137 (392)
Q Consensus 74 ~~~~~-~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~-------------~~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~ 137 (392)
++++| ++..+++.+ .++.|++|+ .+++.+..+. .....++++|+ +.++++...++.|++|+..
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 99999 787777776 689999999 4555544432 12678999998 7777777788999999987
Q ss_pred CCCCCCcceeeeccccceEEEEEEc------CCCEEEEeeCCCcEEEEEcCCCeEEEEEe---cCCCceeEEEEecCCCc
Q psy17243 138 PQTHKDDERFTVSHSEEITCFTVTW------DSQYLITGSRDMSLKVWQVVGGKLAQVLV---GHTDHVSCVAVAVTNKS 208 (392)
Q Consensus 138 ~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~ 208 (392)
+++...... ...+...+..++++| +++.+++...+..|++||..+++.+..+. ++...+..++++ +++.
T Consensus 227 ~G~~~~~~~-~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~-~dG~ 304 (329)
T 3fvz_A 227 TKEFVREIK-HASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS-EDGT 304 (329)
T ss_dssp TCCEEEEEC-CTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC-TTSE
T ss_pred CCcEEEEEe-ccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC-CCCC
Confidence 433221111 123456778889998 33333333345689999999999888873 566778999999 5668
Q ss_pred EEEEecCCCeEEEEECCC
Q psy17243 209 LVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 209 ~l~~~~~dg~i~iwd~~~ 226 (392)
++++...++.|++|++..
T Consensus 305 lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEESSSCCEEEEEEEE
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 889988999999999763
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.76 E-value=1.2e-15 Score=145.62 Aligned_cols=226 Identities=14% Similarity=0.044 Sum_probs=163.5
Q ss_pred CCcCeeEEEecCCCCeEEEEeCCC-----eEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCe--------
Q psy17243 25 HLNTVSCVAISPNSIFAVSGSEDN-----TAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGV-------- 91 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------- 91 (392)
|...+..++|||||++|+.++.++ .|++||+.+++....... ...+..++|+||++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccc
Confidence 445688999999999998765543 899999999987764332 233678999999999999888765
Q ss_pred --------EEEEEcCCce----eeeecc---cceeEEEEeCCCCEEEEecC-----CCcEEEEeCCCCC----CCCccee
Q psy17243 92 --------IAVWVADNAQ----LLYSAL---GPSKCLTVTHNMKYIVSGDG-----DNSLRIWPTSPQT----HKDDERF 147 (392)
Q Consensus 92 --------i~iwd~~~~~----~~~~~~---~~~~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~~~----~~~~~~~ 147 (392)
|++|++.+++ .+.... .....+.++|++++|+.... +..|++||+.... .......
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 9999998875 232322 23568899999999988764 5789999986410 0112222
Q ss_pred eeccccceEEEEEEcCCCEEEEeeCC----CcEEEEEcCCCe--EEEEEecCCC--ceeEEEEecCCCcEEEEecCCCe-
Q psy17243 148 TVSHSEEITCFTVTWDSQYLITGSRD----MSLKVWQVVGGK--LAQVLVGHTD--HVSCVAVAVTNKSLVVSGSKDSN- 218 (392)
Q Consensus 148 ~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~- 218 (392)
...+...+.. .|+++++.|+..+.. +.|.+||+.+++ ....+..|.. .+..++|+ +++.++++...|+.
T Consensus 282 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 282 LIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKN 359 (710)
T ss_dssp EECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEE
T ss_pred eeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEE
Confidence 3344444444 488898887776653 369999998764 2344555544 67788898 67888888888885
Q ss_pred -EEEEECCCCceeeeecccccceeEEEEcCCCeEEE
Q psy17243 219 -LIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAM 253 (392)
Q Consensus 219 -i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~ 253 (392)
|.+|++.+++.+..+..+.+.+..++++|++..++
T Consensus 360 ~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 360 TLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp EEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred EEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEE
Confidence 66778877887778877777889999999886555
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=1.9e-15 Score=127.79 Aligned_cols=216 Identities=15% Similarity=0.195 Sum_probs=158.1
Q ss_pred ccCCeEEEEECCCccceeeec------cCCcCeeEEEe-cCCCCeEEEEeC-CCeEEEEeCCCCceeEEecc-cccceEE
Q psy17243 3 GMDCLVNVWQMNSHELQSTME------GHLNTVSCVAI-SPNSIFAVSGSE-DNTAKVWGLTLGSVVSTFKS-HQSTILA 73 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~-~~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~-~~~~v~~ 73 (392)
..++.|.+||.+ ++.+..+. +|...+..+++ .+++.++++... ++.|.+|| .+++.+..+.. +...+..
T Consensus 48 ~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~ 125 (286)
T 1q7f_A 48 TNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRG 125 (286)
T ss_dssp GGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEE
T ss_pred CCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceE
Confidence 457889999977 55555553 24467899999 467776666543 78999999 66777766643 3456899
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCCceeeeec-----ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceee
Q psy17243 74 VAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSA-----LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFT 148 (392)
Q Consensus 74 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 148 (392)
+++.++++.+++...++.|.+||... +.+..+ ......++++++++.+++...++.|++||.... .....
T Consensus 126 i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~----~~~~~ 200 (286)
T 1q7f_A 126 VTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ----YLRQI 200 (286)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC----EEEEE
T ss_pred EEEeCCCCEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC----EEEEE
Confidence 99999999888777889999999654 443332 134678999999998888788999999997421 11111
Q ss_pred e--ccccceEEEEEEcCCCEEEEeeCCC-cEEEEEcCCCeEEEEEecCCC--ceeEEEEecCCCcEEEEecCCCeEEEEE
Q psy17243 149 V--SHSEEITCFTVTWDSQYLITGSRDM-SLKVWQVVGGKLAQVLVGHTD--HVSCVAVAVTNKSLVVSGSKDSNLIVWD 223 (392)
Q Consensus 149 ~--~~~~~v~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~iwd 223 (392)
. ++...+..++++++++++++...++ .|.+||. +++.+..+..+.. .+..++++ ++++++++ +.|+.|++|+
T Consensus 201 ~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~-~~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 201 GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM-DDGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE-TTTEEEEE-ETTTEEEEEE
T ss_pred ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC-CCCcEEEE-CCCCeEEEEE
Confidence 1 1235688999999998888887775 9999995 5666666655433 46789999 56777777 5699999999
Q ss_pred CCCCc
Q psy17243 224 METGG 228 (392)
Q Consensus 224 ~~~~~ 228 (392)
+....
T Consensus 278 ~~~~~ 282 (286)
T 1q7f_A 278 YVQLA 282 (286)
T ss_dssp CSCCC
T ss_pred ccccc
Confidence 86543
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=6.1e-16 Score=146.57 Aligned_cols=238 Identities=14% Similarity=0.070 Sum_probs=168.2
Q ss_pred eeeeccCCcCeeEEEecCCCCeEEEE--eCCCeEEEEeCCCCceeEEecccccceE---------EEEEe--cCCCE-EE
Q psy17243 19 QSTMEGHLNTVSCVAISPNSIFAVSG--SEDNTAKVWGLTLGSVVSTFKSHQSTIL---------AVAVL--SDSRR-VV 84 (392)
Q Consensus 19 ~~~~~~h~~~v~~~~~~~~~~~l~~~--~~dg~v~iwd~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~ 84 (392)
...+.+|...+..++|+++..+++.. +.++...||....+.....+..+...+. ...|+ ||++. |+
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 34566799999999999887677776 5688999999655555667766666665 66676 99988 76
Q ss_pred EEeC-CCeEEEEEcC--C-cee--eee-----cccceeEEEEeCCCCEEEEecCC----------CcEEEEeCCCCCCC-
Q psy17243 85 TSDK-AGVIAVWVAD--N-AQL--LYS-----ALGPSKCLTVTHNMKYIVSGDGD----------NSLRIWPTSPQTHK- 142 (392)
Q Consensus 85 ~~~~-d~~i~iwd~~--~-~~~--~~~-----~~~~~~~~~~~~~~~~l~~~~~d----------~~i~~~d~~~~~~~- 142 (392)
.++. +..|.++++. . ++. +.. ....+..++|+|+++.|++++.+ ..|++||+......
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 6554 5677777776 3 432 222 22356789999999999998876 58999999751000
Q ss_pred -Ccceeee-ccccceEEEEEEcCCCEEEEeeCC--------CcEEEEEcC-CC---eEEEEEecCCCceeEEEEecCCCc
Q psy17243 143 -DDERFTV-SHSEEITCFTVTWDSQYLITGSRD--------MSLKVWQVV-GG---KLAQVLVGHTDHVSCVAVAVTNKS 208 (392)
Q Consensus 143 -~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~ 208 (392)
....... .+...+..++|+|||++|+.++.+ ..|++||+. ++ +.......|...+..+.|+ ++++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s-pdg~ 254 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA-PDGS 254 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC-TTSC
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC-CCCe
Confidence 1122222 345677788999999999887754 379999998 56 4444445567889999999 5555
Q ss_pred EEEEecCCC--eEEEEECCCCceeeeecccccc--------eeEEEEcCCCeEEEEcCC
Q psy17243 209 LVVSGSKDS--NLIVWDMETGGEEHFLAGHLGC--------VTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 209 ~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~~~dg~~~~~~~~ 257 (392)
++++++.++ .|.+||+.+++.......+... +..++|+++++++++...
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 888888888 6777777677655444433222 567899999999888753
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.74 E-value=1.5e-15 Score=127.05 Aligned_cols=213 Identities=10% Similarity=0.041 Sum_probs=166.2
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCceeEEecccc-cceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeeccc----cee
Q psy17243 37 NSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQ-STILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSALG----PSK 111 (392)
Q Consensus 37 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~ 111 (392)
.+++|++++.++.|.+||.++|+.+.++..+. ..+.++.+.|+|+.++ +.++.|..||. +++.+..+.. .+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 35789999999999999999999999998765 4789999999999888 45788999999 7887776653 456
Q ss_pred EEEEeCCCCEEEEecC-CCcEEEEeCCCCCCCCcceeee---ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEE
Q psy17243 112 CLTVTHNMKYIVSGDG-DNSLRIWPTSPQTHKDDERFTV---SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLA 187 (392)
Q Consensus 112 ~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 187 (392)
++.+.++++++++.+. ++.|..+|.. ++......... .+......+++.++++++++...++.|..||.. ++.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 7888999999999887 7778777753 22111111110 112234556788999999999999999999987 9998
Q ss_pred EEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccc------cceeEEEEcCCCeEEEEcC
Q psy17243 188 QVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHL------GCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 188 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------~~v~~~~~~~dg~~~~~~~ 256 (392)
..+... ..+..+... +++++++++..++.|..+|..+++.+.++.... ..+..++..++|.+++.+.
T Consensus 159 w~~~~~-~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 159 NSVKLS-GTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEECS-SCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEECC-CCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 888754 345566777 678888888888899999999999988886432 2378889999999999874
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=9.6e-16 Score=132.04 Aligned_cols=223 Identities=9% Similarity=-0.001 Sum_probs=165.6
Q ss_pred cCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccc-----cceEEEEEec
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQ-----STILAVAVLS 78 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~ 78 (392)
.++.|.+||..+++.+.++. .......++++++++.+++...++.|.+||..+++....+.... .....+++
T Consensus 62 ~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-- 138 (328)
T 3dsm_A 62 NSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-- 138 (328)
T ss_dssp GGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--
T ss_pred CCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--
Confidence 46899999999999988886 45678899999988544444488999999999998887776433 14456777
Q ss_pred CCCEEEEEe--CCCeEEEEEcCCceeeeeccc--ceeEEEEeCCCCEEEEecCC----------CcEEEEeCCCCCCCCc
Q psy17243 79 DSRRVVTSD--KAGVIAVWVADNAQLLYSALG--PSKCLTVTHNMKYIVSGDGD----------NSLRIWPTSPQTHKDD 144 (392)
Q Consensus 79 ~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d----------~~i~~~d~~~~~~~~~ 144 (392)
++..++++. .++.|.++|+.+++.+..... ....+.+++++++++++..+ +.|.++|..+.+....
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~ 218 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQ 218 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEE
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEE
Confidence 344555555 488999999999987765432 44678899999877776654 7899999875432211
Q ss_pred ceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEE--EecCCCceeEEEEecCCCcEEEEe----cCCCe
Q psy17243 145 ERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQV--LVGHTDHVSCVAVAVTNKSLVVSG----SKDSN 218 (392)
Q Consensus 145 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~----~~dg~ 218 (392)
...........++++|++++|+++.. .|.+||..+++.... +.........++++|.++.++++. ..++.
T Consensus 219 --~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~ 294 (328)
T 3dsm_A 219 --FKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGI 294 (328)
T ss_dssp --EECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEE
T ss_pred --EecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCE
Confidence 11122346789999999999988765 899999988775321 121235678999997678888887 67899
Q ss_pred EEEEECCCCceeeeec
Q psy17243 219 LIVWDMETGGEEHFLA 234 (392)
Q Consensus 219 i~iwd~~~~~~~~~~~ 234 (392)
|.+||.. ++.+..+.
T Consensus 295 V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 295 VYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp EEEECTT-CCEEEEEE
T ss_pred EEEECCC-CCEEEEEE
Confidence 9999998 88887775
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=9e-15 Score=125.96 Aligned_cols=242 Identities=10% Similarity=-0.005 Sum_probs=171.3
Q ss_pred CccCCeEEEEECCCccceeeec------cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEE
Q psy17243 2 GGMDCLVNVWQMNSHELQSTME------GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVA 75 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~ 75 (392)
|+.++.|.++|.++++....+. ........+.+. +++++++...++.|.+||..+++.+.++. .......++
T Consensus 13 g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 13 QYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIH 90 (328)
T ss_dssp TSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEE
T ss_pred CCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEE
Confidence 4568999999999988776542 122345677775 34555666668999999999999988886 356688999
Q ss_pred EecCCCEEEEEe-CCCeEEEEEcCCceeeeecc--c------ceeEEEEeCCCCEEEEec--CCCcEEEEeCCCCCCCCc
Q psy17243 76 VLSDSRRVVTSD-KAGVIAVWVADNAQLLYSAL--G------PSKCLTVTHNMKYIVSGD--GDNSLRIWPTSPQTHKDD 144 (392)
Q Consensus 76 ~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~--~------~~~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~ 144 (392)
+++++ .++++. .++.|.+||+.+++...... . ....+++ ++..++++. .++.|.++|+.+.+....
T Consensus 91 ~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 91 FLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp EEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEE
T ss_pred EeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEE
Confidence 99998 455555 88999999999988765433 2 3446666 344555554 488999999975433221
Q ss_pred ceeeeccccceEEEEEEcCCCEEEEeeCC----------CcEEEEEcCCCeEEEEEecC-CCceeEEEEecCCCcEEEEe
Q psy17243 145 ERFTVSHSEEITCFTVTWDSQYLITGSRD----------MSLKVWQVVGGKLAQVLVGH-TDHVSCVAVAVTNKSLVVSG 213 (392)
Q Consensus 145 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~ 213 (392)
. ........++++|++++++++..+ +.|.++|..+++....+... ......++++| ++..|+.+
T Consensus 168 i----~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~-d~~~lyv~ 242 (328)
T 3dsm_A 168 L----TIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNG-TRDTLYWI 242 (328)
T ss_dssp E----ECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECT-TSCEEEEE
T ss_pred E----EcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEec-CCCEEEEE
Confidence 1 223345678899999877776654 78999999999887776532 23678999994 55555555
Q ss_pred cCCCeEEEEECCCCceee--eecccccceeEEEEcC-CCeEEEEc
Q psy17243 214 SKDSNLIVWDMETGGEEH--FLAGHLGCVTCVKLAG-DGTVAMSD 255 (392)
Q Consensus 214 ~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~-dg~~~~~~ 255 (392)
.. .|.+||..+++... .+.........++++| ++.+.+++
T Consensus 243 ~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 243 NN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp SS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred cc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 43 89999999887642 1222245688999998 67777775
No 185
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.71 E-value=3.2e-15 Score=128.78 Aligned_cols=246 Identities=9% Similarity=0.011 Sum_probs=167.6
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEe----------CCCeEEEEeCCCCceeEEecccc------
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGS----------EDNTAKVWGLTLGSVVSTFKSHQ------ 68 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~dg~v~iwd~~~~~~~~~~~~~~------ 68 (392)
++.|.++|..+++.+..+.....+ .++++|+++++++++ .++.|.+||..+.+.+.++....
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 679999999999999998765555 499999999888775 36789999999999988875321
Q ss_pred -cceEEEEEecCCCEEEEEeC--CCeEEEEEcCCceeeeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcc
Q psy17243 69 -STILAVAVLSDSRRVVTSDK--AGVIAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDE 145 (392)
Q Consensus 69 -~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 145 (392)
..-..+.|+|||++++++.. ++.|.++|+.+++.+.++..+-....+....+.+++.+.||.+.+.++.........
T Consensus 136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~ 215 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 215 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEE
T ss_pred CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEe
Confidence 23457899999999998874 689999999999998877544322333334566777788888888887642121100
Q ss_pred e--eeeccccceE-EEEEE-cCCCEEEEeeCCCcEEEEEcCCCe--EEEEEec----------CCCceeEEEEecCCCcE
Q psy17243 146 R--FTVSHSEEIT-CFTVT-WDSQYLITGSRDMSLKVWQVVGGK--LAQVLVG----------HTDHVSCVAVAVTNKSL 209 (392)
Q Consensus 146 ~--~~~~~~~~v~-~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~----------~~~~v~~~~~~~~~~~~ 209 (392)
. .......++. ...|. ++|++++ .+.+|.|++.|+.+.. .+..+.- .......+++++..+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 216 HTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred ecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 0 0001112221 23554 5675555 4558999999997653 3333320 12233457778555555
Q ss_pred EEEecC---------CCeEEEEECCCCceeeeecccccceeEEEEcCCCe-EEEE
Q psy17243 210 VVSGSK---------DSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGT-VAMS 254 (392)
Q Consensus 210 l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~-~~~~ 254 (392)
+++... .+.|.++|+.+++.+..+.. ...+.+|++++|++ .++.
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYA 348 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEE
T ss_pred EEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEE
Confidence 554321 25799999999999988864 34788999999986 4444
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.71 E-value=8.4e-15 Score=124.39 Aligned_cols=220 Identities=9% Similarity=-0.014 Sum_probs=155.4
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEeccc----ccceEEEEEe
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSH----QSTILAVAVL 77 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~ 77 (392)
+..++.|..|+..++ ...+..+...+.+++++|+++++++...++.|.+||..+++........ ...+..++++
T Consensus 46 ~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d 123 (296)
T 3e5z_A 46 DVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLA 123 (296)
T ss_dssp EGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEEC
T ss_pred eCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEEC
Confidence 456789999999876 5667667788999999999998877777789999999888765443321 2346789999
Q ss_pred cCCCEEEEE----e-------------CCCeEEEEEcCCceee--eecccceeEEEEeCCCCEEEEecCCCcEEEEeCCC
Q psy17243 78 SDSRRVVTS----D-------------KAGVIAVWVADNAQLL--YSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSP 138 (392)
Q Consensus 78 ~~~~~l~~~----~-------------~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 138 (392)
|+|+.+++. . ..+.|..++.. ++.. .........++++|+++.+++.+.++.|.+|++..
T Consensus 124 ~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~ 202 (296)
T 3e5z_A 124 PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA 202 (296)
T ss_dssp TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS
T ss_pred CCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC
Confidence 999988873 2 13456666665 3332 22334567899999999997777889999999862
Q ss_pred CCCC-CcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCC
Q psy17243 139 QTHK-DDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDS 217 (392)
Q Consensus 139 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 217 (392)
.... ........+...+..++++++|+++++. ++.|.+||.. ++.+..+..+.. +++++|..+++..|+.++.+
T Consensus 203 ~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~- 277 (296)
T 3e5z_A 203 RGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST- 277 (296)
T ss_dssp SSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-
T ss_pred CCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-
Confidence 1111 1111112344556789999999866655 7889999986 777777877766 89999964666666666654
Q ss_pred eEEEEECCCCce
Q psy17243 218 NLIVWDMETGGE 229 (392)
Q Consensus 218 ~i~iwd~~~~~~ 229 (392)
.+.-++..+.+.
T Consensus 278 ~l~~~~~~~~~~ 289 (296)
T 3e5z_A 278 EFWSIETNVRGL 289 (296)
T ss_dssp EEEEEECSCCBC
T ss_pred eEEEEEcccccc
Confidence 566666665544
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.71 E-value=5.7e-15 Score=123.64 Aligned_cols=224 Identities=13% Similarity=0.033 Sum_probs=157.0
Q ss_pred CeeEEEecCCCCeEE-EEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeec
Q psy17243 28 TVSCVAISPNSIFAV-SGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSA 106 (392)
Q Consensus 28 ~v~~~~~~~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 106 (392)
...++++++++++++ +...++.|.+|+..+.........+...+.++++.++++.+++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 678999999998666 546789999999766543322222335678899999998555555 889999998876543221
Q ss_pred ---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCC
Q psy17243 107 ---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVG 183 (392)
Q Consensus 107 ---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 183 (392)
......++++++++.+++...++.|.+|+...... ..........+..++++++++++++...++.|.+||...
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ---TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC---EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee---EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 13567899999999777777788999997643211 111112234578899999998777777788999999887
Q ss_pred CeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 184 GKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 184 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.........+...+..++++ +++.++++...++.|.+|+............+...+.+++++++|++.+++.
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVD-EAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp CCEEECCCSSCCSEEEEEEC-TTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEG
T ss_pred CceEeecccCCCCceEEEEC-CCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEEC
Confidence 66544333333668899999 5667888877889999999876544332223345789999999999888765
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.68 E-value=6.2e-15 Score=140.21 Aligned_cols=222 Identities=10% Similarity=0.002 Sum_probs=152.5
Q ss_pred cCCcCeeEEEecCCCCeEE-----EEeCCCeEEEEeCCCCcee-EEecccccceEEEEEecCCCEEEEEeCCCe------
Q psy17243 24 GHLNTVSCVAISPNSIFAV-----SGSEDNTAKVWGLTLGSVV-STFKSHQSTILAVAVLSDSRRVVTSDKAGV------ 91 (392)
Q Consensus 24 ~h~~~v~~~~~~~~~~~l~-----~~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~------ 91 (392)
+|...+..++|||||++|| .|+.+..|++||+++++.+ .... .......++|+||++.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 3555799999999999988 4445578999999999865 2111 1111267899999999999988776
Q ss_pred -------EEEEEcCCce----eeeecc---cceeEEEEeCCCCEEEEecCCC----cEEEEeCCCCCCCCcceeeecccc
Q psy17243 92 -------IAVWVADNAQ----LLYSAL---GPSKCLTVTHNMKYIVSGDGDN----SLRIWPTSPQTHKDDERFTVSHSE 153 (392)
Q Consensus 92 -------i~iwd~~~~~----~~~~~~---~~~~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~~~~~~~ 153 (392)
|++|++.+++ ++.... ..+..+.++|+|++|+..+.++ .|.+++.... . ......+..
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~---~-~~~l~~~~~ 272 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK---D-FRLLVKGVG 272 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS---S-CEEEEECSS
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC---c-eEEeecCCC
Confidence 9999998875 333332 2466889999999998887665 6666654322 2 222223444
Q ss_pred ceEEEEEEcCCCEEEEee---CCCcEEEEEcCCCeE--EEEEecC--CCceeEEEEecCCCcEEEEecCCCeEEEEECC-
Q psy17243 154 EITCFTVTWDSQYLITGS---RDMSLKVWQVVGGKL--AQVLVGH--TDHVSCVAVAVTNKSLVVSGSKDSNLIVWDME- 225 (392)
Q Consensus 154 ~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~- 225 (392)
.+....+ +++.+++... .++.|.+||+.+++. ...+..+ ...+..++++ ++.++++...|+..+||.+.
T Consensus 273 ~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 273 AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEET
T ss_pred ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeC
Confidence 5555555 5666444433 258899999987653 2333333 4457788887 67788888899988887654
Q ss_pred CCceeeeeccc-ccceeEEEEcCCCeEEE
Q psy17243 226 TGGEEHFLAGH-LGCVTCVKLAGDGTVAM 253 (392)
Q Consensus 226 ~~~~~~~~~~~-~~~v~~~~~~~dg~~~~ 253 (392)
+++....+..+ ...+..++++||+..++
T Consensus 350 ~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 350 KGKPVRTVQLPGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp TCCEEEECCCSSSSEECCCBSCTTCSEEE
T ss_pred CCCeeEEecCCCCeEEEEeecCCCCCEEE
Confidence 45556666554 56778888889887665
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=1.6e-14 Score=120.91 Aligned_cols=221 Identities=10% Similarity=0.010 Sum_probs=154.3
Q ss_pred ccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec-ccccceEEEEEecCCC
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK-SHQSTILAVAVLSDSR 81 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 81 (392)
+.++.|.+|+..+.........+...+.+++++++++++++.. ++.|.+||....... .+. .....+..+++.++++
T Consensus 43 ~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~ 120 (270)
T 1rwi_B 43 GMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGA 120 (270)
T ss_dssp SSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCC
T ss_pred CCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCC
Confidence 4567888888765543322233445788999999998666655 889999998765433 332 2335689999999998
Q ss_pred EEEEEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEE
Q psy17243 82 RVVTSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCF 158 (392)
Q Consensus 82 ~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~ 158 (392)
.+++...++.|.+|+..+....... ......++++++++.+++...++.|.+||...... ..........+..+
T Consensus 121 l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i 197 (270)
T 1rwi_B 121 VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ---VVLPFTDITAPWGI 197 (270)
T ss_dssp EEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE---EECCCSSCCSEEEE
T ss_pred EEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce---EeecccCCCCceEE
Confidence 7777777889999987665443221 12567899999999777777788999999864321 11112233668899
Q ss_pred EEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCce
Q psy17243 159 TVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGE 229 (392)
Q Consensus 159 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 229 (392)
++.+++.++++...++.|.+||............+...+.+++++ ++++++++...++.|+++++...+.
T Consensus 198 ~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~-~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 198 AVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVD-SDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEEC-TTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred EECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEEC-CCCCEEEEECCCCEEEEEcCCCccc
Confidence 999999777777778899999987654333222333568899999 5667888888999999999876554
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=3.3e-14 Score=135.61 Aligned_cols=221 Identities=9% Similarity=0.024 Sum_probs=155.1
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCe----------------EEEEeCCCCce----eEEe
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNT----------------AKVWGLTLGSV----VSTF 64 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~----------------v~iwd~~~~~~----~~~~ 64 (392)
...|++||+.+++.......+ ..+..++|+|||+.|+.++.++. |++|++.+++. +...
T Consensus 150 ~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~ 228 (710)
T 2xdw_A 150 WVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228 (710)
T ss_dssp CEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC
T ss_pred eEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc
Confidence 348999999998877643322 33778999999999999887766 99999988762 2233
Q ss_pred cccccceEEEEEecCCCEEEEEeC-----CCeEEEEEcCC------ce----eeeecccceeEEEEeCCCCEEEEecCC-
Q psy17243 65 KSHQSTILAVAVLSDSRRVVTSDK-----AGVIAVWVADN------AQ----LLYSALGPSKCLTVTHNMKYIVSGDGD- 128 (392)
Q Consensus 65 ~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~------~~----~~~~~~~~~~~~~~~~~~~~l~~~~~d- 128 (392)
..+...+..+.|+|++++|+..+. +..|++||+.+ +. .+........ ..++++++.|+..+..
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRH 307 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTT
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCC
Confidence 334556889999999999888765 56899999976 42 1222222232 3578888888776553
Q ss_pred ---CcEEEEeCCCCCCCCcceeeeccc--cceEEEEEEcCCCEEEEeeCCCc--EEEEEcCCCeEEEEEecCCCceeEEE
Q psy17243 129 ---NSLRIWPTSPQTHKDDERFTVSHS--EEITCFTVTWDSQYLITGSRDMS--LKVWQVVGGKLAQVLVGHTDHVSCVA 201 (392)
Q Consensus 129 ---~~i~~~d~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~v~~~~ 201 (392)
..|.+||+....... ......+. ..+..++|++++.++++...++. |.+||+.+++.+..+..+...+..+.
T Consensus 308 ~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~ 386 (710)
T 2xdw_A 308 SPNYRLINIDFTDPEESK-WKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYS 386 (710)
T ss_dssp CTTCEEEEEETTSCCGGG-CEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEE
T ss_pred CCCCEEEEEeCCCCCccc-ceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEe
Confidence 369999987542111 12222333 36788899877778888888874 66678767887788877777888899
Q ss_pred EecCCCcEEEEec---CCCeEEEEECCCCc
Q psy17243 202 VAVTNKSLVVSGS---KDSNLIVWDMETGG 228 (392)
Q Consensus 202 ~~~~~~~~l~~~~---~dg~i~iwd~~~~~ 228 (392)
++|.+..++++.+ ..+.|+.||+.+++
T Consensus 387 ~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 387 GQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred cCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 9854444554433 35789999998877
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=5e-13 Score=116.67 Aligned_cols=243 Identities=8% Similarity=-0.037 Sum_probs=165.3
Q ss_pred eEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEe----------CCCeEEEEeCCCCceeEEeccc-------cc
Q psy17243 7 LVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGS----------EDNTAKVWGLTLGSVVSTFKSH-------QS 69 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~dg~v~iwd~~~~~~~~~~~~~-------~~ 69 (392)
.|.++|..+++.+..+.....+ .++++||+++++.+. .++.|.+||..+.+.+.++... ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 8999999999998888755444 999999999998885 3678999999998888776532 12
Q ss_pred ceEEEEEecCCCEEEEEeC--CCeEEEEEcCCceeeee-cccceeEEEEeCCC-CEEEEecCCCcEEEEeCCCCCCCCcc
Q psy17243 70 TILAVAVLSDSRRVVTSDK--AGVIAVWVADNAQLLYS-ALGPSKCLTVTHNM-KYIVSGDGDNSLRIWPTSPQTHKDDE 145 (392)
Q Consensus 70 ~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~ 145 (392)
.-..+.|+|+|++|+++.. ++.|.++| .+++.+.. ...+. ++.+.+++ +.+++.+.||.+.++|. .++.....
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~ 202 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAG 202 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEE
Confidence 3458999999999998874 57899999 99988877 55433 34555554 45666778999999998 44332111
Q ss_pred ee--eeccccc-eEEEEEEcCCCEEEEeeCCCcEEEEEcCCCe--EEEEEecC----------CCceeEEEEecCCCcEE
Q psy17243 146 RF--TVSHSEE-ITCFTVTWDSQYLITGSRDMSLKVWQVVGGK--LAQVLVGH----------TDHVSCVAVAVTNKSLV 210 (392)
Q Consensus 146 ~~--~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~----------~~~v~~~~~~~~~~~~l 210 (392)
.. ......+ .....+.+++..++..+..+.+.+.|+.... .+..+.-. ......++++|..+.++
T Consensus 203 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 203 LVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred eccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 10 0011122 1234566666555555578899999987552 22222211 12233467885444444
Q ss_pred EEec---------CCCeEEEEECCCCceeeeecccccceeEEEEcCCCe-EEEEc
Q psy17243 211 VSGS---------KDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGT-VAMSD 255 (392)
Q Consensus 211 ~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~-~~~~~ 255 (392)
++.. ..+.|.++|..+++.+..+.. ......++|+|||+ +++..
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEE
Confidence 4332 235899999999999888863 34689999999999 55553
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.66 E-value=2.7e-14 Score=124.16 Aligned_cols=212 Identities=11% Similarity=0.061 Sum_probs=142.4
Q ss_pred eEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCC---------------------------CeEEEEeCCCCc
Q psy17243 7 LVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSED---------------------------NTAKVWGLTLGS 59 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---------------------------g~v~iwd~~~~~ 59 (392)
.|.+|++.+++...... +.. +..++|+|+++.|+.++.+ ..|.+||+.+++
T Consensus 86 ~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 86 EIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 58888888877655544 334 9999999999988887642 579999999888
Q ss_pred eeEEecccccceEEEEEecCCCEEEEEeCCC-------eEEEEEcCCceeeeecccceeEEEEeCCCCEEEEecCC----
Q psy17243 60 VVSTFKSHQSTILAVAVLSDSRRVVTSDKAG-------VIAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDGD---- 128 (392)
Q Consensus 60 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---- 128 (392)
.+..+.. . .+..+.|+|++ .++++..++ ...+|.+.+++....... .....++|++++|+.++.+
T Consensus 164 ~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~ 239 (347)
T 2gop_A 164 VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAVDSDGERILLYGKPEKKY 239 (347)
T ss_dssp EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEEEECSSCEEEEECCSSSC
T ss_pred EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeECCCCCEEEEEEccccCC
Confidence 7555554 4 78899999999 777776542 334444334443221111 2223349999988877644
Q ss_pred ----CcEEEEeCCCCCCCCcceeeeccccceEE-EEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEe
Q psy17243 129 ----NSLRIWPTSPQTHKDDERFTVSHSEEITC-FTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVA 203 (392)
Q Consensus 129 ----~~i~~~d~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 203 (392)
..|.+|| ++. .......+...+.. +.|+ ++ ++++++.++.+++| +.+++.. .+..+...|.+++|+
T Consensus 240 ~~~~~~l~~~d--~~~---~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s 310 (347)
T 2gop_A 240 MSEHNKLYIYD--GKE---VMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVD 310 (347)
T ss_dssp CCSSCEEEEEC--SSC---EEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEEES
T ss_pred ccccceEEEEC--CCc---eEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEeeeee
Confidence 3677777 221 12222344567775 8898 88 88899999999999 8766554 444457789999999
Q ss_pred cCCCcEEEEecCCCeE-EEEECCCCceeeeeccccc
Q psy17243 204 VTNKSLVVSGSKDSNL-IVWDMETGGEEHFLAGHLG 238 (392)
Q Consensus 204 ~~~~~~l~~~~~dg~i-~iwd~~~~~~~~~~~~~~~ 238 (392)
| .++++++.++.. .+|.+. ++ ...+..|+.
T Consensus 311 ~---~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~ 341 (347)
T 2gop_A 311 E---IVVYLKETATRLRELFTWD-GE-EKQLTDYND 341 (347)
T ss_dssp S---SEEEEEECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred C---cEEEEEcCCCChHHheEeC-Cc-EEEeccccH
Confidence 5 577777666654 777666 44 444555543
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.66 E-value=1.3e-12 Score=110.80 Aligned_cols=241 Identities=7% Similarity=0.011 Sum_probs=169.6
Q ss_pred CCeEEEEECCCccceee-eccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCcee-EEecccccceEEEEEecCCCE
Q psy17243 5 DCLVNVWQMNSHELQST-MEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVV-STFKSHQSTILAVAVLSDSRR 82 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~ 82 (392)
++.|.+||.. ++.... +..+...+.++++.+++.++++...++.|..||.+ ++.. ..+......+..+++.++++.
T Consensus 35 ~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l 112 (299)
T 2z2n_A 35 ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDI 112 (299)
T ss_dssp TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCE
T ss_pred CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCE
Confidence 5778899887 543322 22345779999999999877777768899999976 4332 222224557899999999988
Q ss_pred EEEEeCCCeEEEEEcCCceeee-ec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEE
Q psy17243 83 VVTSDKAGVIAVWVADNAQLLY-SA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCF 158 (392)
Q Consensus 83 l~~~~~d~~i~iwd~~~~~~~~-~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~ 158 (392)
+++...++.|..||. +++... .. ......+++.++++..++...++.|..||. .+.... .........+..+
T Consensus 113 ~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~~~~~~~~~~i 188 (299)
T 2z2n_A 113 WFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE--FKIPTPASGPVGI 188 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE--EECSSTTCCEEEE
T ss_pred EEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE--eeCCCCCCcceeE
Confidence 887777889999998 444332 21 235678999999988877777889999988 322111 1112234567899
Q ss_pred EEEcCCCEEEEeeCCCcEEEEEcCCCeEEEE-EecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceee-eeccc
Q psy17243 159 TVTWDSQYLITGSRDMSLKVWQVVGGKLAQV-LVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH-FLAGH 236 (392)
Q Consensus 159 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~ 236 (392)
++.++++++++...++.|.+||. +++.... ...+...+.+++++ +++.++++...++.|..||. +++... .+..+
T Consensus 189 ~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 265 (299)
T 2z2n_A 189 TKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAG-AGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIK 265 (299)
T ss_dssp EECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-STTCEEEEETTTTEEEEEET-TTEEEEEECSSS
T ss_pred EECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEEC-CCCCEEEeccCCceEEEECC-CCceEEEeCCCC
Confidence 99999987777666889999998 6654332 23344678899998 56777777667899999998 454322 23344
Q ss_pred ccceeEEEEcCCCeEEEEc
Q psy17243 237 LGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 237 ~~~v~~~~~~~dg~~~~~~ 255 (392)
...+.++++ ++|.+.+..
T Consensus 266 ~~~~~~i~~-~~g~l~v~~ 283 (299)
T 2z2n_A 266 SAEPHGICF-DGETIWFAM 283 (299)
T ss_dssp SCCEEEEEE-CSSCEEEEE
T ss_pred CCccceEEe-cCCCEEEEe
Confidence 567899999 999988875
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.65 E-value=1e-13 Score=127.19 Aligned_cols=199 Identities=7% Similarity=0.057 Sum_probs=144.1
Q ss_pred CCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcC--Cceeeeeccc--cee
Q psy17243 36 PNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVAD--NAQLLYSALG--PSK 111 (392)
Q Consensus 36 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~--~~~ 111 (392)
|.+.++++...++.|.++|..+++.+.++.. ...+..+.|+|+++++++++.++.|.+||+. +.+.+..... ...
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~ 243 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR 243 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc
Confidence 4455677778899999999999999988874 4456799999999999999999999999995 7776655542 456
Q ss_pred EEEEe----CCCCEEEEecC-CCcEEEEeCCCCCCCCcceeeec-------c-ccceEEEEEEcCCCE-EEEeeCCCcEE
Q psy17243 112 CLTVT----HNMKYIVSGDG-DNSLRIWPTSPQTHKDDERFTVS-------H-SEEITCFTVTWDSQY-LITGSRDMSLK 177 (392)
Q Consensus 112 ~~~~~----~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~-------~-~~~v~~~~~~~~~~~-l~~~~~dg~i~ 177 (392)
.++++ |+++++++++. ++.+.++|..+.+.......... | ...+..+..++++.. ++....+|.|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 88999 69998888765 58999999875443332221110 1 225778888887554 44555679999
Q ss_pred EEEcCCCeEEEEE-ecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc
Q psy17243 178 VWQVVGGKLAQVL-VGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG 235 (392)
Q Consensus 178 i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 235 (392)
++|..+.+.+... .........+.|+|.+..++++...++.|.++|+.+++.+..+..
T Consensus 324 ~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 324 LVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 9998775432221 123445678899955454556666789999999999988766543
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.65 E-value=5.5e-13 Score=114.09 Aligned_cols=223 Identities=10% Similarity=0.052 Sum_probs=156.6
Q ss_pred CCcCeeEEEecCCCCeEEE-------EeCCCeEEEEeCCCCceeEEec----ccccceEEEEEecC-CCEEEEEeCCCeE
Q psy17243 25 HLNTVSCVAISPNSIFAVS-------GSEDNTAKVWGLTLGSVVSTFK----SHQSTILAVAVLSD-SRRVVTSDKAGVI 92 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l~~-------~~~dg~v~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~d~~i 92 (392)
.-....+++|++++.++++ +..++.|.+||..+++...... ++...+..++++++ ++ |++++..+.|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l 94 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGL 94 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCE
Confidence 3445689999999987777 5778999999988877643222 24567899999999 65 4445445579
Q ss_pred EEEEcCCceeeee-cc-------cceeEEEEeCCCCEEEEecCC---------------CcEEEEeCCCCCCCCcceeee
Q psy17243 93 AVWVADNAQLLYS-AL-------GPSKCLTVTHNMKYIVSGDGD---------------NSLRIWPTSPQTHKDDERFTV 149 (392)
Q Consensus 93 ~iwd~~~~~~~~~-~~-------~~~~~~~~~~~~~~l~~~~~d---------------~~i~~~d~~~~~~~~~~~~~~ 149 (392)
.+||.. ++.... .. ..+..++++++++.+++...+ +.|..|+.. + ......
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g----~~~~~~ 168 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G----QMIQVD 168 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S----CEEEEE
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C----CEEEec
Confidence 999988 655332 11 236789999999877776654 567777653 1 111122
Q ss_pred ccccceEEEEEE----cCCCEEEEe-eCCCcEEEEEcC-CCeE-----EEEEecCC-CceeEEEEecCCCcEEEEecCCC
Q psy17243 150 SHSEEITCFTVT----WDSQYLITG-SRDMSLKVWQVV-GGKL-----AQVLVGHT-DHVSCVAVAVTNKSLVVSGSKDS 217 (392)
Q Consensus 150 ~~~~~v~~~~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~~-----~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg 217 (392)
.+......++++ ++++.|+++ ..++.|.+||+. +++. ...+..+. ..+..++++ +++.++++...++
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD-EDNNLLVANWGSS 247 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB-TTCCEEEEEETTT
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC-CCCCEEEEEcCCC
Confidence 233456889999 998766555 467899999986 4542 22233333 567889999 6778888777789
Q ss_pred eEEEEECCCCceeeeecccccceeEEEEcCCCe-EEEEc
Q psy17243 218 NLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGT-VAMSD 255 (392)
Q Consensus 218 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~-~~~~~ 255 (392)
.|.+||..+++.+..+..+...+.+++|+++|+ +.++.
T Consensus 248 ~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEe
Confidence 999999987887777766667899999999998 44554
No 196
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.65 E-value=3.6e-13 Score=116.29 Aligned_cols=213 Identities=9% Similarity=0.004 Sum_probs=146.2
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCC----CeEEEEeCCCCceeEEec--ccccceEEEE
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSED----NTAKVWGLTLGSVVSTFK--SHQSTILAVA 75 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----g~v~iwd~~~~~~~~~~~--~~~~~v~~~~ 75 (392)
+..++.|.+||.++++.......+...+.+++++|+++++++...+ +.|.+||.++++....+. .+...+..++
T Consensus 62 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~ 141 (333)
T 2dg1_A 62 DVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMV 141 (333)
T ss_dssp ETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEE
T ss_pred ECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceE
Confidence 3467889999998877665554567889999999999877777666 689999998876653332 2345789999
Q ss_pred EecCCCEEEEEeC------CCeEEEEEcCCceeee--ecccceeEEEEeCCCCEEEEe-cCCCcEEEEeCCCCCC-CCcc
Q psy17243 76 VLSDSRRVVTSDK------AGVIAVWVADNAQLLY--SALGPSKCLTVTHNMKYIVSG-DGDNSLRIWPTSPQTH-KDDE 145 (392)
Q Consensus 76 ~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~-~~~~ 145 (392)
++|+++.+++... .+.|..+|..+++... ........++++|+++.++++ ..++.|.+||+..... ....
T Consensus 142 ~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~ 221 (333)
T 2dg1_A 142 FDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF 221 (333)
T ss_dssp ECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE
T ss_pred ECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccc
Confidence 9999987776654 3567777766544322 222356789999999866554 5678999999863211 1110
Q ss_pred --eee--eccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCC------ceeEEEEecCCCcEEEEecC
Q psy17243 146 --RFT--VSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTD------HVSCVAVAVTNKSLVVSGSK 215 (392)
Q Consensus 146 --~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~l~~~~~ 215 (392)
... ......+..++++++++++++...++.|.+||. +++.+..+..+.. .+.+++|+ +++..|+.++.
T Consensus 222 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~-~dg~~L~v~~~ 299 (333)
T 2dg1_A 222 GATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFI-PGTNQLIICSN 299 (333)
T ss_dssp EEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEEC-TTSCEEEEEEE
T ss_pred cceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEEC-CCCCEEEEEeC
Confidence 001 111146788999999998887777889999998 5666666654432 68899998 45544444433
Q ss_pred C
Q psy17243 216 D 216 (392)
Q Consensus 216 d 216 (392)
+
T Consensus 300 ~ 300 (333)
T 2dg1_A 300 D 300 (333)
T ss_dssp C
T ss_pred c
Confidence 3
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.63 E-value=2.2e-12 Score=109.37 Aligned_cols=223 Identities=9% Similarity=0.034 Sum_probs=153.3
Q ss_pred CCcCeeEEEecCC-CCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceee
Q psy17243 25 HLNTVSCVAISPN-SIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLL 103 (392)
Q Consensus 25 h~~~v~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 103 (392)
+..---+..|+|+ +.++++...++.|..||..+++. ..+. ....+.+++++++++++++ . +..|.+||.++++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 3344568899995 55666777789999999988765 3333 4567999999999995544 4 567999999887653
Q ss_pred e--ecc-----cceeEEEEeCCCCEEEEecCC---------CcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEE
Q psy17243 104 Y--SAL-----GPSKCLTVTHNMKYIVSGDGD---------NSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYL 167 (392)
Q Consensus 104 ~--~~~-----~~~~~~~~~~~~~~l~~~~~d---------~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 167 (392)
. ... .....++++++++++++.... ..-.+|.+.... ............+.++|+|+++.|
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---~~~~~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH---HVKKYFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS---CEEEEEEEESBEEEEEECTTSCEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC---CEEEEeeccccccceEEcCCCCEE
Confidence 2 211 235679999999966654221 223445443221 111222334456889999999876
Q ss_pred EE-eeCCCcEEEEEc--CCCeEE-----EEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccc
Q psy17243 168 IT-GSRDMSLKVWQV--VGGKLA-----QVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGC 239 (392)
Q Consensus 168 ~~-~~~dg~i~i~d~--~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 239 (392)
+. .+.++.|.+||+ .++... ..+..+......++++ +++++.++...++.|..||..+++.+..+..+...
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d-~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~ 242 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID-AEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDK 242 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB-TTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSB
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC-CCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCC
Confidence 55 455788999997 455432 2222334567889998 66778777777889999999999999888877778
Q ss_pred eeEEEEc-CCCeEEEEc
Q psy17243 240 VTCVKLA-GDGTVAMSD 255 (392)
Q Consensus 240 v~~~~~~-~dg~~~~~~ 255 (392)
+++++|. ||++.|...
T Consensus 243 ~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 243 TTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp EEEEEEESGGGCEEEEE
T ss_pred ceEEEEeCCCCCEEEEE
Confidence 9999998 787755443
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=3.2e-12 Score=108.35 Aligned_cols=226 Identities=9% Similarity=0.065 Sum_probs=162.6
Q ss_pred cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEE-ecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCcee
Q psy17243 24 GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVST-FKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQL 102 (392)
Q Consensus 24 ~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 102 (392)
.+...+.++++.++++++++...++.|.+||.. ++.... ...+...+.++++.+++..+++...++.|..||......
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~ 90 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIK 90 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEE
Confidence 355679999999999877776667899999988 554332 223456789999999998888777788999999863322
Q ss_pred eeec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEE
Q psy17243 103 LYSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVW 179 (392)
Q Consensus 103 ~~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 179 (392)
.... ...+..+++.+++..+++...++.|.+||.. +... ..........+..+++.++++++++...++.|..|
T Consensus 91 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 91 EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKIR--EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE--EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCEE--EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 2221 2356789999999888877778899999872 2111 11111234568899999999877777777899999
Q ss_pred EcCCCeEEEE-EecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeee-ecccccceeEEEEcCCCeEEEEcC
Q psy17243 180 QVVGGKLAQV-LVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHF-LAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 180 d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
|. +++.... .......+..+++. +++.++++...++.|.+||. +++.... ...+...+.+++++++|++.+...
T Consensus 168 ~~-~g~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 168 TE-SGDITEFKIPTPASGPVGITKG-NDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred cC-CCcEEEeeCCCCCCcceeEEEC-CCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc
Confidence 98 6655433 23344567889998 56777777777889999999 6664332 333456789999999999877753
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.62 E-value=6.5e-14 Score=133.20 Aligned_cols=225 Identities=11% Similarity=0.039 Sum_probs=149.5
Q ss_pred CccCCeEEEEECCCccce-eeeccCCcCeeEEEecCCCCeEEEEeCCCe-------------EEEEeCCCCc----eeEE
Q psy17243 2 GGMDCLVNVWQMNSHELQ-STMEGHLNTVSCVAISPNSIFAVSGSEDNT-------------AKVWGLTLGS----VVST 63 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~-------------v~iwd~~~~~----~~~~ 63 (392)
|+.+..|++||+.+++.+ .... .......++|+|||+.|+.++.|.. |++|++.+++ ++..
T Consensus 143 G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~ 221 (695)
T 2bkl_A 143 AADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE 221 (695)
T ss_dssp TCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC
T ss_pred CCceEEEEEEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe
Confidence 556789999999998865 2111 1111268999999999999988776 9999998876 3334
Q ss_pred ecccccceEEEEEecCCCEEEEEeCCC----eEEEEEcCCcee--eeecccceeEEEEeCCCCEEEEec---CCCcEEEE
Q psy17243 64 FKSHQSTILAVAVLSDSRRVVTSDKAG----VIAVWVADNAQL--LYSALGPSKCLTVTHNMKYIVSGD---GDNSLRIW 134 (392)
Q Consensus 64 ~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~~~ 134 (392)
...+...+..+.|+|+|++|+..+.++ .|.+++..+++. +...........+ +++.+++... .++.|.+|
T Consensus 222 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 222 RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEE
T ss_pred cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEE
Confidence 444556789999999999998877665 677777655433 2222333444444 5666444433 25789999
Q ss_pred eCCCCCCCCcceeeecc-ccceEEEEEEcCCCEEEEeeCCCcEEEEEcC-CCeEEEEEecC-CCceeEEEEecCCCcEEE
Q psy17243 135 PTSPQTHKDDERFTVSH-SEEITCFTVTWDSQYLITGSRDMSLKVWQVV-GGKLAQVLVGH-TDHVSCVAVAVTNKSLVV 211 (392)
Q Consensus 135 d~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~ 211 (392)
|+.+............+ ...+..++++ ++.++++...|+..++|.+. +++....+..+ ...+..+.++|.+..+++
T Consensus 301 d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~ 379 (695)
T 2bkl_A 301 DPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYY 379 (695)
T ss_dssp BTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEE
T ss_pred eCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEE
Confidence 98754321112222222 4567888888 67788888889988887664 45555666544 566778888854434444
Q ss_pred Eec---CCCeEEEEECCCCce
Q psy17243 212 SGS---KDSNLIVWDMETGGE 229 (392)
Q Consensus 212 ~~~---~dg~i~iwd~~~~~~ 229 (392)
+.+ ..+.|++||+.+++.
T Consensus 380 ~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 380 VFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEETTEEEEEEEEETTTCCE
T ss_pred EEcCCCCCCEEEEEECCCCcE
Confidence 333 357899999988764
No 200
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=2.2e-13 Score=118.75 Aligned_cols=195 Identities=11% Similarity=0.085 Sum_probs=131.8
Q ss_pred cCCeEEEEECCCccceeeeccC------CcCeeEEEecCCCCeEEEEeC--CCeEEEEeCCCCceeEE-ecccccceEEE
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGH------LNTVSCVAISPNSIFAVSGSE--DNTAKVWGLTLGSVVST-FKSHQSTILAV 74 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~ 74 (392)
.++.|.+||..+++.+.++... ......++++|+|++|+++.. +++|.+||+++++.+.. +... .. ..+
T Consensus 79 ~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~~-~~v 156 (361)
T 2oiz_A 79 RSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-GC-WSV 156 (361)
T ss_dssp EEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-TE-EEE
T ss_pred CCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-Cc-cee
Confidence 4678999999999988887632 345778999999999998864 58999999999988877 5421 11 112
Q ss_pred EEecCC-CEEEEE------------------------------------------------eCCCeEEEEEcCCceee--
Q psy17243 75 AVLSDS-RRVVTS------------------------------------------------DKAGVIAVWVADNAQLL-- 103 (392)
Q Consensus 75 ~~~~~~-~~l~~~------------------------------------------------~~d~~i~iwd~~~~~~~-- 103 (392)
.+.|++ ..+++. +.++.+.++|+......
T Consensus 157 ~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~ 236 (361)
T 2oiz_A 157 IPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVD 236 (361)
T ss_dssp EECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEE
T ss_pred EEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceec
Confidence 222222 222233 33344555554432211
Q ss_pred eec---c----------cceeEEEEeCCCCEEEEecC-----------CCcEEEEeCCCCCCCCcceeeeccccceEEEE
Q psy17243 104 YSA---L----------GPSKCLTVTHNMKYIVSGDG-----------DNSLRIWPTSPQTHKDDERFTVSHSEEITCFT 159 (392)
Q Consensus 104 ~~~---~----------~~~~~~~~~~~~~~l~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~ 159 (392)
... . .....++++|+++.++++.. .+.|.+||+.+.+ .......+. +..++
T Consensus 237 ~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---~v~~i~~~~--p~~ia 311 (361)
T 2oiz_A 237 GPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---RVARIPGRD--ALSMT 311 (361)
T ss_dssp EEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE---EEEEEECTT--CCEEE
T ss_pred ccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc---EEEEEecCC--eeEEE
Confidence 100 0 00113788999888887643 3479999997543 222222333 89999
Q ss_pred EEcCCCEEEEeeCCCcEEEEEcCCC--eEEEEEecCCCceeEEEEecCC
Q psy17243 160 VTWDSQYLITGSRDMSLKVWQVVGG--KLAQVLVGHTDHVSCVAVAVTN 206 (392)
Q Consensus 160 ~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~ 206 (392)
|+|++++|++++. +.|.+||..++ +.+..+..+......++++|.+
T Consensus 312 ~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 312 IDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp EETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred ECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 9999999999887 99999999999 9998886677778889999543
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=5.3e-12 Score=107.06 Aligned_cols=243 Identities=9% Similarity=0.029 Sum_probs=169.5
Q ss_pred cCCeEEEEECCCcccee-eeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeE-EecccccceEEEEEecCCC
Q psy17243 4 MDCLVNVWQMNSHELQS-TMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVS-TFKSHQSTILAVAVLSDSR 81 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~ 81 (392)
.++.|.+||.. ++... .+..+...+.++++.+++.+.++...++.|..||.. ++... .+......+..+++.++++
T Consensus 39 ~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~ 116 (300)
T 2qc5_A 39 KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD 116 (300)
T ss_dssp TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC
T ss_pred CCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCC
Confidence 45778888877 54433 222344678999999999877777667899999987 55432 2222346789999999998
Q ss_pred EEEEEeCCCeEEEEEcCCceeee-ec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEE
Q psy17243 82 RVVTSDKAGVIAVWVADNAQLLY-SA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITC 157 (392)
Q Consensus 82 ~l~~~~~d~~i~iwd~~~~~~~~-~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~ 157 (392)
.+++...++.|..+|.. ++... .. ......+++.++++..++...++.|..||.. +... ..........+..
T Consensus 117 l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~--~~~~~~~~~~~~~ 192 (300)
T 2qc5_A 117 IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT-GKLE--EYPLPTNAAAPVG 192 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEE--EEECSSTTCCEEE
T ss_pred EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC-CcEE--EeeCCCCCCCcce
Confidence 88777778899999987 54432 22 2356789999999976666667889999873 2211 1111123456889
Q ss_pred EEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEE-EecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceee-eecc
Q psy17243 158 FTVTWDSQYLITGSRDMSLKVWQVVGGKLAQV-LVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH-FLAG 235 (392)
Q Consensus 158 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~ 235 (392)
+++.+++++.++....+.|.+||. +++.... +..+...+.++++. +++.++++...++.|..||. +++... .+..
T Consensus 193 i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~ 269 (300)
T 2qc5_A 193 ITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAG-KNSEIWFTEWGANQIGRITN-DNTIQEYQLQT 269 (300)
T ss_dssp EEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-STTCEEEEETTTTEEEEECT-TSCEEEEECCS
T ss_pred EEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEEC-CCCCEEEeccCCCeEEEECC-CCcEEEEECCc
Confidence 999999987777666778999998 5544332 33345668899998 55677777767799999998 454332 2333
Q ss_pred cccceeEEEEcCCCeEEEEc
Q psy17243 236 HLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 236 ~~~~v~~~~~~~dg~~~~~~ 255 (392)
....+.++++.++|.+.+..
T Consensus 270 ~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 270 ENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp TTCCCCCEEECTTSCEEEEC
T ss_pred cCCccceeEeCCCCCEEEEc
Confidence 44568899999999987775
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=1.3e-12 Score=115.66 Aligned_cols=226 Identities=12% Similarity=0.102 Sum_probs=157.0
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCC--eEEEEEcCCceeee
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAG--VIAVWVADNAQLLY 104 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~ 104 (392)
.....|+|+++++++++...++.|++||.++++.......... .. ++|+++++.|+++..++ .|.+++...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4678999999999777777789999999988777655554333 33 99999999999988866 79999887654422
Q ss_pred e-------cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCccee-eeccccc--eEEEEEEcC-CCEEEEeeCC
Q psy17243 105 S-------ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERF-TVSHSEE--ITCFTVTWD-SQYLITGSRD 173 (392)
Q Consensus 105 ~-------~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~--v~~~~~~~~-~~~l~~~~~d 173 (392)
. ......+++++|++..|+++..++.|+.||............ ....... ...++|+|+ +.++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 2 223567899999666666677789999999874421110000 1111111 138999995 5555555667
Q ss_pred CcEEEEEcCCCeEEEEEecCC---------------CceeEEEEecCCCcEEEEec-CCCeEEEEECCCCceeeeeccc-
Q psy17243 174 MSLKVWQVVGGKLAQVLVGHT---------------DHVSCVAVAVTNKSLVVSGS-KDSNLIVWDMETGGEEHFLAGH- 236 (392)
Q Consensus 174 g~i~i~d~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~- 236 (392)
+.|+.|+.... +..+.++. .....++++ +++.++++-. .++.|+.|++.+++. ..+.++
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d-~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~ 364 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVD-EDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQV 364 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC-TTCCEEEEETTTTCEEEEEETTTTEE-EEEEECT
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEe-CCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCC
Confidence 89999997543 33333332 347789999 5677888887 899999999877764 333333
Q ss_pred --------------ccceeEEEEcCCCeEEEEcCCC
Q psy17243 237 --------------LGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 237 --------------~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
-.....++++++|.+++++...
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n 400 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG 400 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC
Confidence 2357899999999999987543
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.61 E-value=5.6e-13 Score=127.66 Aligned_cols=223 Identities=13% Similarity=0.106 Sum_probs=152.3
Q ss_pred CCcCeeEEEecCCCCeEEEEeCC-----CeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCe--------
Q psy17243 25 HLNTVSCVAISPNSIFAVSGSED-----NTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGV-------- 91 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------- 91 (392)
|...+..++|||||++|+.++.+ ..|++||+++++.+.... +...+..++|+|| +.|+.+..++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44468899999999999877544 469999999998765421 2223457899999 99988876654
Q ss_pred ------EEEEEcCCce----eeeeccc---ceeEEEEeCCCCEEEEecCCC-----cEEEEeCCCCCCCCcceeeecccc
Q psy17243 92 ------IAVWVADNAQ----LLYSALG---PSKCLTVTHNMKYIVSGDGDN-----SLRIWPTSPQTHKDDERFTVSHSE 153 (392)
Q Consensus 92 ------i~iwd~~~~~----~~~~~~~---~~~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~ 153 (392)
|++|++.+++ .+..... ....+.++|+|++|+....++ .|++||+..+.. ........+..
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~ 317 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI-GPVTALIPDLK 317 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE-CCCEEEECSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC-cccEEecCCCC
Confidence 8999998765 3333322 367889999999988877543 899999864311 10222223333
Q ss_pred ceEEEEEEcCCCEEEEeeC----CCcEEEEEcCCC--eEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECC-C
Q psy17243 154 EITCFTVTWDSQYLITGSR----DMSLKVWQVVGG--KLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDME-T 226 (392)
Q Consensus 154 ~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~ 226 (392)
.+... ++|+++.|+..+. ++.|.+||+.++ +....+..+...+..+.++ ++.++++...|+..+||.+. +
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETT
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCC
Confidence 44444 3588888887765 345999999874 3444445455556677776 66788888889987777554 4
Q ss_pred Cceeeeecc-cccceeEEEEcCCCeEEE
Q psy17243 227 GGEEHFLAG-HLGCVTCVKLAGDGTVAM 253 (392)
Q Consensus 227 ~~~~~~~~~-~~~~v~~~~~~~dg~~~~ 253 (392)
++....+.. +...+..+.++||+..++
T Consensus 395 g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 422 (741)
T 1yr2_A 395 GKPAGAVSLPGIGSASGLSGRPGDRHAY 422 (741)
T ss_dssp SCEEEECBCSSSCEEEEEECCBTCSCEE
T ss_pred CCceeeccCCCCeEEEEeecCCCCCEEE
Confidence 566666654 356788899999887555
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.61 E-value=3.1e-13 Score=118.61 Aligned_cols=224 Identities=9% Similarity=0.008 Sum_probs=154.7
Q ss_pred CeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEe----------CCCeEEEEeCCCCceeEEeccc-------c
Q psy17243 6 CLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGS----------EDNTAKVWGLTLGSVVSTFKSH-------Q 68 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~dg~v~iwd~~~~~~~~~~~~~-------~ 68 (392)
+.|.++|..+++.+.++..-..+ .++++||+++|+++. .++.|.++|..+++.+.++... .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 79999999999999999865556 899999999888876 3678999999999998887532 1
Q ss_pred cceEEEEEecCCCEEEEEeC--CCeEEEEEcCCceeeeecccce----------eEEEEeCCCCEEEEecC---------
Q psy17243 69 STILAVAVLSDSRRVVTSDK--AGVIAVWVADNAQLLYSALGPS----------KCLTVTHNMKYIVSGDG--------- 127 (392)
Q Consensus 69 ~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~~~--------- 127 (392)
.....+.++||+++++++.. ++.|.+.|+.+.+.+..+..+- ..+.++++++++++...
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~ 256 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT 256 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence 23457899999999999874 5789999999998876654321 11334444444333332
Q ss_pred ----------------------------CCcEEEEeCCCCCCCCcceeee------c---cccceEEEEEEcCCCEEEEe
Q psy17243 128 ----------------------------DNSLRIWPTSPQTHKDDERFTV------S---HSEEITCFTVTWDSQYLITG 170 (392)
Q Consensus 128 ----------------------------d~~i~~~d~~~~~~~~~~~~~~------~---~~~~v~~~~~~~~~~~l~~~ 170 (392)
.+.+.+.|.............. . .......++++|+++++++.
T Consensus 257 ~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 257 EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 2333333332111000000000 0 01111226899998887776
Q ss_pred eC----------CCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCc-EEEEec-CCCeEEEEECCCCceeeee
Q psy17243 171 SR----------DMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKS-LVVSGS-KDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 171 ~~----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~-~dg~i~iwd~~~~~~~~~~ 233 (392)
.. .+.|.++|..+.+.+..+... .....++|+| +++ ++++.. .++.|.++|+.+++.+.++
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~sp-Dg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQ-DAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECC-SSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEcc-CCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 42 357999999999999888632 3578899995 555 666666 6999999999999999887
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.58 E-value=1.2e-12 Score=112.83 Aligned_cols=239 Identities=10% Similarity=-0.022 Sum_probs=161.8
Q ss_pred cCCeEEEEECCCccceeeeccCC-------cCeeEEEecCCCCeEEEEeC--CCeEEEEeCCCCceeEEecccccceEEE
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHL-------NTVSCVAISPNSIFAVSGSE--DNTAKVWGLTLGSVVSTFKSHQSTILAV 74 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~ 74 (392)
.++.|.+||..+++.+..+.-.. ..-..++|+|||++++++.. ++.|.++|+.+++.+.++.... . ..
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g-~--~~ 183 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD-C--YH 183 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-E--EE
T ss_pred CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC-c--ce
Confidence 36789999999999988875321 24567999999999888864 6899999999999999886422 1 22
Q ss_pred EEecCCCEEEEEeCCCeEEEEEcCC-ceeeeecc-------cce-eEEEEe-CCCCEEEEecCCCcEEEEeCCCCCCCCc
Q psy17243 75 AVLSDSRRVVTSDKAGVIAVWVADN-AQLLYSAL-------GPS-KCLTVT-HNMKYIVSGDGDNSLRIWPTSPQTHKDD 144 (392)
Q Consensus 75 ~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~-------~~~-~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 144 (392)
.+....+.+++.+.||.+.+.++.+ ++...... .++ ....|. +++++++ .+.+|.|++.|.........
T Consensus 184 ~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~ 262 (386)
T 3sjl_D 184 IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFL 262 (386)
T ss_dssp EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEEC
T ss_pred eecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceee
Confidence 3333445777888888888888876 44422111 111 113443 5665555 55589999999875432211
Q ss_pred ceee--e-------ccccceEEEEEEcCCCEEEEeeC----------CCcEEEEEcCCCeEEEEEecCCCceeEEEEecC
Q psy17243 145 ERFT--V-------SHSEEITCFTVTWDSQYLITGSR----------DMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVT 205 (392)
Q Consensus 145 ~~~~--~-------~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 205 (392)
.... . -.......++++++++.++.... ...|.++|+.+++.+..+.. ...+..++++++
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D 341 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQD 341 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSS
T ss_pred cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCC
Confidence 1111 0 01223345778999998888653 25799999999999988763 347789999955
Q ss_pred CCcEEEE-ecCCCeEEEEECCCCceeeeecccccceeEEEEcCC
Q psy17243 206 NKSLVVS-GSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGD 248 (392)
Q Consensus 206 ~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~d 248 (392)
+..+|++ ...++.|.++|..+++.+.++... +.-+.|.+++|
T Consensus 342 ~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 342 EKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp SSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred CCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 5435555 456899999999999999888643 33345555555
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=1.6e-12 Score=111.18 Aligned_cols=221 Identities=10% Similarity=0.062 Sum_probs=152.3
Q ss_pred CccCCeEEEEECCCccceeeec----cCCcCeeEEEecCC-CCeEEEEeCCCeEEEEeCCCCceeEE-ecc----cccce
Q psy17243 2 GGMDCLVNVWQMNSHELQSTME----GHLNTVSCVAISPN-SIFAVSGSEDNTAKVWGLTLGSVVST-FKS----HQSTI 71 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~----~h~~~v~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~----~~~~v 71 (392)
+..++.|.+||..+++...... ++...+.+++++++ ++++++. ..+.|.+||.+ ++.... ... ....+
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGC 119 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCC
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCC
Confidence 3567889999988776543222 25567899999999 7655544 44579999988 665433 221 12358
Q ss_pred EEEEEecCCCEEEEEeCC---------------CeEEEEEcCCceeee--ecccceeEEEEe----CCCCEEEEe-cCCC
Q psy17243 72 LAVAVLSDSRRVVTSDKA---------------GVIAVWVADNAQLLY--SALGPSKCLTVT----HNMKYIVSG-DGDN 129 (392)
Q Consensus 72 ~~~~~~~~~~~l~~~~~d---------------~~i~iwd~~~~~~~~--~~~~~~~~~~~~----~~~~~l~~~-~~d~ 129 (392)
.++++.++++.+++...+ +.|..++.. ++... ........++++ ++++.++++ ..++
T Consensus 120 ~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~ 198 (314)
T 1pjx_A 120 NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTK 198 (314)
T ss_dssp CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTT
T ss_pred cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCC
Confidence 899999999887776654 567777766 44322 222345788999 999766555 5678
Q ss_pred cEEEEeCCC-CCCCC--cceeeeccc-cceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecC
Q psy17243 130 SLRIWPTSP-QTHKD--DERFTVSHS-EEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVT 205 (392)
Q Consensus 130 ~i~~~d~~~-~~~~~--~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 205 (392)
.|.+||... +.... .......+. ..+..++++++++++++...++.|.+||..+++.+..+..+...+.+++++ +
T Consensus 199 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~-~ 277 (314)
T 1pjx_A 199 KLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFK-P 277 (314)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEEC-T
T ss_pred eEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEEC-C
Confidence 999999752 11100 111111222 557889999999888887778899999998777777777666789999998 5
Q ss_pred CCc-EEEEecCCCeEEEEECCC
Q psy17243 206 NKS-LVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 206 ~~~-~l~~~~~dg~i~iwd~~~ 226 (392)
++. ++++...++.|..|++..
T Consensus 278 dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 278 QTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEeCCCCeEEEEeCCC
Confidence 566 666666778999999875
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.57 E-value=1.3e-12 Score=113.11 Aligned_cols=172 Identities=9% Similarity=-0.018 Sum_probs=132.8
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEcCCce-------------eeeecccceeEEEEeCCCCEEEEecCCCcEEEEeC
Q psy17243 70 TILAVAVLSDSRRVVTSDKAGVIAVWVADNAQ-------------LLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPT 136 (392)
Q Consensus 70 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-------------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~ 136 (392)
+++.+++++....+++|+.++ +.+|+++..+ ....+.. +..++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 689999999999999999885 5569865443 2334555 889999 89999999 8899999999
Q ss_pred CCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCC
Q psy17243 137 SPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKD 216 (392)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 216 (392)
.+... ......+...+.++.+.+. .++++..||.|.+||+.+++... +...|++++|+ +++ ++.|..|
T Consensus 114 ~sl~~---~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WS-pkG--~~vg~~d 181 (388)
T 1xip_A 114 EELSE---FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVT-NSQ--LAVLLKD 181 (388)
T ss_dssp SSTTC---EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEEC-SSE--EEEEETT
T ss_pred hhhhc---cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEc-CCc--eEEEEcC
Confidence 85442 2233355667887776644 38888999999999999887643 44689999999 455 5678889
Q ss_pred CeEEEEECCCCce--eeee------c---ccccceeEEEEcCCCeEEEEcCCC
Q psy17243 217 SNLIVWDMETGGE--EHFL------A---GHLGCVTCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 217 g~i~iwd~~~~~~--~~~~------~---~~~~~v~~~~~~~dg~~~~~~~~~ 258 (392)
|++++|+...++. ...+ . +|...|.++.|.+++.++++-...
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~ 234 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNV 234 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECC
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCC
Confidence 9999999887664 4455 2 367889999999999999875543
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.56 E-value=2.3e-11 Score=106.14 Aligned_cols=223 Identities=11% Similarity=-0.054 Sum_probs=153.9
Q ss_pred cCCeEEEEECCCccceeeeccC-------CcCeeEEEecCCCCeEEEEeC--CCeEEEEeCCCCceeEE-ecccccceEE
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGH-------LNTVSCVAISPNSIFAVSGSE--DNTAKVWGLTLGSVVST-FKSHQSTILA 73 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~ 73 (392)
.++.|.+||..+.+.+..+.-. ...-..+.|+|+|++|+++.. ++.|.++| .+++.+.. +.. ...
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~~--- 169 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PTC--- 169 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cce---
Confidence 4678999999998888776432 123458999999999998874 57899999 99998888 653 222
Q ss_pred EEEecCC-CEEEEEeCCCeEEEEEcCCceeeeecc------c--ce-eEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCC
Q psy17243 74 VAVLSDS-RRVVTSDKAGVIAVWVADNAQLLYSAL------G--PS-KCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKD 143 (392)
Q Consensus 74 ~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~------~--~~-~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 143 (392)
+.+.|++ ..+++.+.||.+.++|. +++...... . ++ ....+.+++..++..+..+.+.+.|+.......
T Consensus 170 ~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v 248 (373)
T 2mad_H 170 YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN 248 (373)
T ss_pred EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE
Confidence 4455555 45667778999999999 776653211 1 11 123455665555555577899999986432211
Q ss_pred cceeee---------ccccceEEEEEEcCCCEEEEeeC----------CCcEEEEEcCCCeEEEEEecCCCceeEEEEec
Q psy17243 144 DERFTV---------SHSEEITCFTVTWDSQYLITGSR----------DMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAV 204 (392)
Q Consensus 144 ~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 204 (392)
...... ........+.++|+++.+++... .+.|.++|+.+++.+..+.. ......++|+|
T Consensus 249 ~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~ 327 (373)
T 2mad_H 249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQ 327 (373)
T ss_pred eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECC
Confidence 111100 01233445789999998888653 35799999999999888863 34678999995
Q ss_pred CCCcEEEEec-CCCeEEEEECCCCceeeee
Q psy17243 205 TNKSLVVSGS-KDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 205 ~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~ 233 (392)
++..+++++. .++.|.++|+.+++.+..+
T Consensus 328 Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 328 DGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 4442677766 5899999999999998874
No 209
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.55 E-value=3.1e-13 Score=116.75 Aligned_cols=234 Identities=8% Similarity=-0.053 Sum_probs=153.9
Q ss_pred eEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEe----------CCCeEEEEeCCCCceeEEeccc-------cc
Q psy17243 7 LVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGS----------EDNTAKVWGLTLGSVVSTFKSH-------QS 69 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~dg~v~iwd~~~~~~~~~~~~~-------~~ 69 (392)
.|.++|..+++.+.++.....+ .+.++|++++++++. .++.|.+||+.+++.+.++... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8999999999999999766666 799999999988886 3688999999999999998643 12
Q ss_pred ceEEEEEecCCCEEEEEeC--CCeEEE--EEcCCceeeeecccc--------eeEEEE----------------------
Q psy17243 70 TILAVAVLSDSRRVVTSDK--AGVIAV--WVADNAQLLYSALGP--------SKCLTV---------------------- 115 (392)
Q Consensus 70 ~v~~~~~~~~~~~l~~~~~--d~~i~i--wd~~~~~~~~~~~~~--------~~~~~~---------------------- 115 (392)
....++++|||++++++.. +..+.+ +|+.+-..+.. .+. ..-+..
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v-~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~ 203 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKS-ASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVG 203 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEEC-SSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEEC-CCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEE
Confidence 3568999999999998875 467888 88865111100 000 000111
Q ss_pred ---------------eCCCCEEEEecCCCcEEEEeCCCCCCCCcceeee------c---cccceEEEEEEcCCCEEEEee
Q psy17243 116 ---------------THNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTV------S---HSEEITCFTVTWDSQYLITGS 171 (392)
Q Consensus 116 ---------------~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~------~---~~~~v~~~~~~~~~~~l~~~~ 171 (392)
.+++..++..+. +.+.+.|.............. . .......++++|++++++++.
T Consensus 204 ~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~ 282 (368)
T 1mda_H 204 AQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILT 282 (368)
T ss_dssp CCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred EEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEe
Confidence 222233333333 555555554211100000000 0 011112267999999888764
Q ss_pred C---------CCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEec-CCCeEEEEECCCCceeeeeccccccee
Q psy17243 172 R---------DMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGS-KDSNLIVWDMETGGEEHFLAGHLGCVT 241 (392)
Q Consensus 172 ~---------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~ 241 (392)
. ++.+.++|+.+.+.+..+.... ....++|+|.+..++++.. .++.|.++|+.+++.+..++.... ..
T Consensus 283 ~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~ 360 (368)
T 1mda_H 283 VEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PE 360 (368)
T ss_dssp EECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CC
T ss_pred ccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CC
Confidence 3 2356799999999888876433 6789999955555777777 699999999999999988875433 33
Q ss_pred EEEEc
Q psy17243 242 CVKLA 246 (392)
Q Consensus 242 ~~~~~ 246 (392)
.+++.
T Consensus 361 ~i~~~ 365 (368)
T 1mda_H 361 SLSVQ 365 (368)
T ss_dssp EEECC
T ss_pred EEEee
Confidence 44443
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.53 E-value=1.9e-11 Score=103.62 Aligned_cols=208 Identities=10% Similarity=0.032 Sum_probs=138.9
Q ss_pred cCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecc----cccceEEEEEecC
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKS----HQSTILAVAVLSD 79 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~ 79 (392)
.++.|..||..+++. ..+. ....+.+++++++++++++ . ++.|.+||.++++....... ....+..+++.|+
T Consensus 33 ~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d 108 (297)
T 3g4e_A 33 PAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA 108 (297)
T ss_dssp TTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT
T ss_pred CCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC
Confidence 467888888877654 3333 4577999999999995554 3 56799999988765433221 1245789999999
Q ss_pred CCEEEEEeCC---------CeEEEEEcCC-cee--eeecccceeEEEEeCCCCEEEE-ecCCCcEEEEeCC--CCCCCCc
Q psy17243 80 SRRVVTSDKA---------GVIAVWVADN-AQL--LYSALGPSKCLTVTHNMKYIVS-GDGDNSLRIWPTS--PQTHKDD 144 (392)
Q Consensus 80 ~~~l~~~~~d---------~~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~l~~-~~~d~~i~~~d~~--~~~~~~~ 144 (392)
|+++++.... ..-.+|.+.. ++. +.......+.++++|+++.+++ .+.++.|.+|++. .+.....
T Consensus 109 G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~ 188 (297)
T 3g4e_A 109 GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR 188 (297)
T ss_dssp SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE
T ss_pred CCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc
Confidence 9966654321 2234444432 222 2222234578999999987755 4557899999874 2221111
Q ss_pred cee--eeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEe-cCCCcEEEEecC
Q psy17243 145 ERF--TVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVA-VTNKSLVVSGSK 215 (392)
Q Consensus 145 ~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~ 215 (392)
... ..........+++.++|++.++....+.|..||..+++.+..+..+...+++++|. |..+.++++...
T Consensus 189 ~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 189 RSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 111 11233567889999999877777778889999999899988888777789999998 444555555543
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.52 E-value=7.2e-11 Score=101.41 Aligned_cols=214 Identities=10% Similarity=-0.041 Sum_probs=146.1
Q ss_pred eeEEEecCC-CCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeee--
Q psy17243 29 VSCVAISPN-SIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYS-- 105 (392)
Q Consensus 29 v~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-- 105 (392)
..+..|+|+ +.++++...++.|..||.++++.. .+. ....+.++++.++++++++. .+ .|.+||..+++....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 467899997 456667767899999999877643 333 35679999999999876654 44 499999988765322
Q ss_pred cc-----cceeEEEEeCCCCEEEEecC------CCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEe-eCC
Q psy17243 106 AL-----GPSKCLTVTHNMKYIVSGDG------DNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITG-SRD 173 (392)
Q Consensus 106 ~~-----~~~~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 173 (392)
.. ..+..+.++++++++++... .+.|..++ . +. .............++|+|+++.|+.+ ..+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~-g~----~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K-GK----VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T-TE----EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C-Cc----EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 11 24678999999986665432 24555555 2 11 11111233456789999999877655 456
Q ss_pred CcEEEEEcC--CC-eE-----EEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEE
Q psy17243 174 MSLKVWQVV--GG-KL-----AQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKL 245 (392)
Q Consensus 174 g~i~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 245 (392)
+.|.+||+. ++ +. ...+.........+++. +++.+.++...++.|.+||. +++.+..+..+...+.+++|
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d-~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af 278 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD-AEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF 278 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC-TTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEEC-CCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE
Confidence 899999986 55 31 22222234556788888 66777776666789999998 57777777766678999999
Q ss_pred c-CCCeEEEE
Q psy17243 246 A-GDGTVAMS 254 (392)
Q Consensus 246 ~-~dg~~~~~ 254 (392)
+ +|+..+..
T Consensus 279 ~g~d~~~L~v 288 (326)
T 2ghs_A 279 IGPDASRLLV 288 (326)
T ss_dssp ESTTSCEEEE
T ss_pred ecCCCCEEEE
Confidence 8 88765543
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.52 E-value=1.2e-10 Score=98.70 Aligned_cols=224 Identities=10% Similarity=0.040 Sum_probs=160.4
Q ss_pred CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeE-EecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceee
Q psy17243 25 HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVS-TFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLL 103 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 103 (392)
....+.++++.+++++.++...++.|.+||.. ++... .+......+..+++.++++.+++...++.|..+|.. ++..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT 95 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE
Confidence 45678899999999877777678999999987 55443 222334678999999999877777778899999988 5443
Q ss_pred -eec---ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEE
Q psy17243 104 -YSA---LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVW 179 (392)
Q Consensus 104 -~~~---~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 179 (392)
... ......+++.++++++++...++.|..+|.. +... . .........+..+++.+++++.++...++.|..|
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-E-YDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-E-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-E-ccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 222 2356788999999888877778899999875 2111 1 1111234568899999999866666667889999
Q ss_pred EcCCCeEEEE-EecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeee-ecccccceeEEEEcCCCeEEEEcC
Q psy17243 180 QVVGGKLAQV-LVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHF-LAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 180 d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
|. +++.... ...+...+..+++. +++.++++....+.|.+||. +++.... +..+...+.++++.++|++.++..
T Consensus 173 ~~-~g~~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 173 TN-TGKLEEYPLPTNAAAPVGITSG-NDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CC-CCcEEEeeCCCCCCCcceEEEC-CCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 98 5554432 22334568899998 56777777777788999998 4554332 333456788999999999877764
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.51 E-value=6.3e-13 Score=115.06 Aligned_cols=168 Identities=17% Similarity=0.129 Sum_probs=127.3
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc-----------eeEEecccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS-----------VVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVW 95 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 95 (392)
.+++.+++++...++++|+.++ +.+|++++.+ ..... .+.. |+.++| +++.|+++ .++.|++|
T Consensus 38 ~~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 3689999999999999999875 6669865433 11222 3556 999999 88999998 88999999
Q ss_pred EcCCce---eeeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC
Q psy17243 96 VADNAQ---LLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR 172 (392)
Q Consensus 96 d~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 172 (392)
|+.+.. ....+..++..+.+.+. .+++++.||.|.+||+...... .+...|+|++|+|+| ++.|..
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~-------~~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK-------QLAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE-------EEEESEEEEEECSSE--EEEEET
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc-------cccCCceEEEEcCCc--eEEEEc
Confidence 987553 33445556666655543 3888999999999999744321 144689999999999 678899
Q ss_pred CCcEEEEEcCCCeE--EEEE------e---cCCCceeEEEEecCCCcEEEE
Q psy17243 173 DMSLKVWQVVGGKL--AQVL------V---GHTDHVSCVAVAVTNKSLVVS 212 (392)
Q Consensus 173 dg~i~i~d~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~~l~~ 212 (392)
||.+++|+....+. ...+ . +|...|.++.|. +++.++++
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl-~~~~flv~ 230 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTIL-SPQDFLAV 230 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEES-SSSEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEe-cCCeEEEE
Confidence 99999999988775 5555 2 367889999999 66777665
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.50 E-value=6.7e-12 Score=120.22 Aligned_cols=219 Identities=15% Similarity=0.031 Sum_probs=145.5
Q ss_pred CeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCe--------------EEEEeCCCCce----eEEeccc
Q psy17243 6 CLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNT--------------AKVWGLTLGSV----VSTFKSH 67 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~--------------v~iwd~~~~~~----~~~~~~~ 67 (392)
..|++||+.+++.+.. ..+...+..++|+|| +.|+.++.++. |++|++.+++. +.....+
T Consensus 189 ~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~ 266 (741)
T 1yr2_A 189 RTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL 266 (741)
T ss_dssp EEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC
Confidence 5799999999887653 223333468999999 98888876654 89999987752 2222333
Q ss_pred ccceEEEEEecCCCEEEEEeCCC-----eEEEEEcCCc--e-e--eeecccceeEEEEeCCCCEEEEecC----CCcEEE
Q psy17243 68 QSTILAVAVLSDSRRVVTSDKAG-----VIAVWVADNA--Q-L--LYSALGPSKCLTVTHNMKYIVSGDG----DNSLRI 133 (392)
Q Consensus 68 ~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~--~-~--~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~~ 133 (392)
...+..+.|+|||++|+..+.++ .|++||+.++ + . +.......... ++|+++.|+..+. ++.|.+
T Consensus 267 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~ 345 (741)
T 1yr2_A 267 PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVR 345 (741)
T ss_dssp TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEE
T ss_pred CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEE
Confidence 34588999999999988877543 8999999876 3 2 22222223333 3588888887765 345999
Q ss_pred EeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcC-CCeEEEEEec-CCCceeEEEEecCCCcEEE
Q psy17243 134 WPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVV-GGKLAQVLVG-HTDHVSCVAVAVTNKSLVV 211 (392)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~ 211 (392)
||+.... .........+...+..+.+. ++.++++...++..+||.+. +++....+.. +...+..+.++|.+..+++
T Consensus 346 ~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~ 423 (741)
T 1yr2_A 346 VDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYL 423 (741)
T ss_dssp EECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEE
T ss_pred EeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEE
Confidence 9987532 11222333344456677777 56677888888887777554 4555566654 3567888889865544554
Q ss_pred Eec---CCCeEEEEECCCCce
Q psy17243 212 SGS---KDSNLIVWDMETGGE 229 (392)
Q Consensus 212 ~~~---~dg~i~iwd~~~~~~ 229 (392)
+.+ ..+.|++||+.+++.
T Consensus 424 ~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 424 SFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEETTEEEEEEEEETTTTEE
T ss_pred EEcCCCCCCEEEEEECCCCcE
Confidence 433 357899999988763
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=5.5e-11 Score=101.20 Aligned_cols=225 Identities=14% Similarity=0.037 Sum_probs=151.9
Q ss_pred ceeeeccCCcCeeEEEecCCCC-eEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEE
Q psy17243 18 LQSTMEGHLNTVSCVAISPNSI-FAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWV 96 (392)
Q Consensus 18 ~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 96 (392)
.+..+..+........|+|+++ ++++...++.|..|+. +++ ...+..+...+..+++.++++.+++...++.|..|+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 3444555566678899999988 6677778899999997 454 345555667789999999999766666668899999
Q ss_pred cCCceeeee---cc----cceeEEEEeCCCCEEEE----ecC-------------CCcEEEEeCCCCCCCCcceeeeccc
Q psy17243 97 ADNAQLLYS---AL----GPSKCLTVTHNMKYIVS----GDG-------------DNSLRIWPTSPQTHKDDERFTVSHS 152 (392)
Q Consensus 97 ~~~~~~~~~---~~----~~~~~~~~~~~~~~l~~----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~~ 152 (392)
.+ ++.... .. .....+++.++|+..++ |.. .+.|..||..++... .. . ..
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~---~~-~-~~ 187 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ---RM-A-DL 187 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE---EE-E-EE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE---EE-e-cC
Confidence 86 443211 11 13457999999998776 432 256777776433221 11 1 33
Q ss_pred cceEEEEEEcCCCEEEEeeCC------CcEEEEEcCCCeEE--EEE-ecCCCceeEEEEecCCCcEEEEecCCCeEEEEE
Q psy17243 153 EEITCFTVTWDSQYLITGSRD------MSLKVWQVVGGKLA--QVL-VGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWD 223 (392)
Q Consensus 153 ~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 223 (392)
.....++|+|+++.|+.+... +.|.+|++...... ..+ .........+++. +++++.+ +..+ .|.+|+
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d-~~G~lwv-~~~~-gv~~~~ 264 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVD-RGGWLWS-SSGT-GVCVFD 264 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEEC-TTSCEEE-CCSS-EEEEEC
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEEC-CCCCEEE-ecCC-cEEEEC
Confidence 456789999999988877665 68999998765411 111 1123445678888 5666544 4444 599999
Q ss_pred CCCCceeeeecccccceeEEEEcCCCeEEEEc
Q psy17243 224 METGGEEHFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 224 ~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
. +++.+..+..+. .+.+++|+++++.+...
T Consensus 265 ~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it 294 (305)
T 3dr2_A 265 S-DGQLLGHIPTPG-TASNCTFDQAQQRLFIT 294 (305)
T ss_dssp T-TSCEEEEEECSS-CCCEEEECTTSCEEEEE
T ss_pred C-CCCEEEEEECCC-ceeEEEEeCCCCEEEEE
Confidence 8 577777776554 58899999988765543
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.48 E-value=4.8e-11 Score=105.62 Aligned_cols=212 Identities=11% Similarity=0.103 Sum_probs=148.7
Q ss_pred cCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCC--eEEEEeCCCCceeEEe----cccccceEEEEEe
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDN--TAKVWGLTLGSVVSTF----KSHQSTILAVAVL 77 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg--~v~iwd~~~~~~~~~~----~~~~~~v~~~~~~ 77 (392)
.++.|++||.++++........ .... ++|+|+++.|+++..++ .|.+++...+.....+ ......+.+++++
T Consensus 150 ~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~ 227 (409)
T 3hrp_A 150 DDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALD 227 (409)
T ss_dssp TTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEEC
T ss_pred CCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEe
Confidence 4578999999877766555443 2334 99999999888888766 7999998766554444 2244567889999
Q ss_pred cCCCEEEEEeCCCeEEEEEcCCceeeee----cc---cce--eEEEEeCC-CCEEEEecCCCcEEEEeCCCCCCCCccee
Q psy17243 78 SDSRRVVTSDKAGVIAVWVADNAQLLYS----AL---GPS--KCLTVTHN-MKYIVSGDGDNSLRIWPTSPQTHKDDERF 147 (392)
Q Consensus 78 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~---~~~--~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 147 (392)
|++..|+++..++.|+.||..++..... .. ... ..++++|+ +.++++-..++.|+.|+.... ...
T Consensus 228 p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-----~~~ 302 (409)
T 3hrp_A 228 ETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-----CEW 302 (409)
T ss_dssp TTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-----EEE
T ss_pred CCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-----EEE
Confidence 9656666678889999999987754322 11 111 28999995 555555566889999987532 111
Q ss_pred eecc---------------ccceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEecC---------------CCc
Q psy17243 148 TVSH---------------SEEITCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVGH---------------TDH 196 (392)
Q Consensus 148 ~~~~---------------~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~---------------~~~ 196 (392)
..++ -.....++++++++++++-. .++.|+.|++.+++. ..+.++ -..
T Consensus 303 ~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~ 381 (409)
T 3hrp_A 303 FCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNY 381 (409)
T ss_dssp EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSS
T ss_pred EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCC
Confidence 1111 23478999999999777777 789999999877764 334333 235
Q ss_pred eeEEEEecCCCcEEEEecCCCeEEEEEC
Q psy17243 197 VSCVAVAVTNKSLVVSGSKDSNLIVWDM 224 (392)
Q Consensus 197 v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 224 (392)
...++++ +++.++++-..++.|+.+++
T Consensus 382 P~giavd-~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 382 PYDICYD-GEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEEC-SSSEEEEEESTTCEEEEEEE
T ss_pred ceEEEEc-CCCCEEEEECCCCeEEEEEe
Confidence 7789999 45888888888888888765
No 217
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.46 E-value=1.8e-11 Score=115.53 Aligned_cols=250 Identities=13% Similarity=0.113 Sum_probs=165.9
Q ss_pred CccCCeEEEEECCCccceeeeccC--CcCeeEEEecC---CCCeEEEEe------CCCeEEEEeCCCCceeEEecccc--
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGH--LNTVSCVAISP---NSIFAVSGS------EDNTAKVWGLTLGSVVSTFKSHQ-- 68 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h--~~~v~~~~~~~---~~~~l~~~~------~dg~v~iwd~~~~~~~~~~~~~~-- 68 (392)
++.|+.|..+|.++|+.+..+... ......+..+| ++. ++.++ .+|.|..||.++|+.+-.+....
T Consensus 127 ~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 205 (689)
T 1yiq_A 127 GVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGD 205 (689)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCC
T ss_pred EccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCC
Confidence 567899999999999998777542 11111222223 444 44443 37899999999999887664210
Q ss_pred -----------------------------cceEEEEEecCCCEEEEEeCCCe-------------------EEEEEcCCc
Q psy17243 69 -----------------------------STILAVAVLSDSRRVVTSDKAGV-------------------IAVWVADNA 100 (392)
Q Consensus 69 -----------------------------~~v~~~~~~~~~~~l~~~~~d~~-------------------i~iwd~~~~ 100 (392)
.....+++.|+...++.+..++. |..+|.+++
T Consensus 206 p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG 285 (689)
T 1yiq_A 206 PKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTG 285 (689)
T ss_dssp TTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTC
T ss_pred cccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCC
Confidence 01125788898889999888764 999999999
Q ss_pred eeeeecccc------------eeEEEEeCCCC---EEEEecCCCcEEEEeCCCCCCCCcceeee----------------
Q psy17243 101 QLLYSALGP------------SKCLTVTHNMK---YIVSGDGDNSLRIWPTSPQTHKDDERFTV---------------- 149 (392)
Q Consensus 101 ~~~~~~~~~------------~~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---------------- 149 (392)
+.+..+... ........+++ .++.++.+|.++++|..+++......+..
T Consensus 286 ~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~ 365 (689)
T 1yiq_A 286 EYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPIL 365 (689)
T ss_dssp CEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEE
T ss_pred ceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCccc
Confidence 987654321 11112223554 78899999999999998765431110000
Q ss_pred ---------ccc-----------cceEEEEEEcCCCEEEEeeC-------------------------------------
Q psy17243 150 ---------SHS-----------EEITCFTVTWDSQYLITGSR------------------------------------- 172 (392)
Q Consensus 150 ---------~~~-----------~~v~~~~~~~~~~~l~~~~~------------------------------------- 172 (392)
... ..-..++++|+..++++...
T Consensus 366 ~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~ 445 (689)
T 1yiq_A 366 DEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEG 445 (689)
T ss_dssp CHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHH
T ss_pred chhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCccccc
Confidence 000 00123688888888777532
Q ss_pred --------CCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccccc-ceeEE
Q psy17243 173 --------DMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLG-CVTCV 243 (392)
Q Consensus 173 --------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~ 243 (392)
+|.|..||+.+++.+..+..+. +...-.+. ..+.+++.++.||.|+.||.++|+.+.+++...+ ...-+
T Consensus 446 ~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~-tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ 523 (689)
T 1yiq_A 446 LLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLS-TAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPV 523 (689)
T ss_dssp HHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE
T ss_pred CCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccce-ECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCce
Confidence 3779999999999988876543 33333444 3566888899999999999999999988875433 23456
Q ss_pred EEcCCCeEEEE
Q psy17243 244 KLAGDGTVAMS 254 (392)
Q Consensus 244 ~~~~dg~~~~~ 254 (392)
.|..||+..+.
T Consensus 524 ty~~~G~qyv~ 534 (689)
T 1yiq_A 524 TYSVDGEQYVT 534 (689)
T ss_dssp EEEETTEEEEE
T ss_pred EEEECCEEEEE
Confidence 77788885544
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=3.2e-11 Score=104.40 Aligned_cols=228 Identities=11% Similarity=0.075 Sum_probs=148.0
Q ss_pred cCeeEEEecCCCCeEEEEe--CCCeEEEEeCCCCceeEEec-------ccccceEEEEEecCCCEEEEEeC-----CCeE
Q psy17243 27 NTVSCVAISPNSIFAVSGS--EDNTAKVWGLTLGSVVSTFK-------SHQSTILAVAVLSDSRRVVTSDK-----AGVI 92 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~-----d~~i 92 (392)
.....++++|+|+++++.. .++.++||.+.+++.. .+. .+-..+..+++.++++.+++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6789999999999888864 2343556655555432 221 23467899999999875555433 5789
Q ss_pred EEEEcCCceeeeeccc---------ceeEEEEeCCCCEEEEe-c---CCCcEEEEeCCCCCCCCcc-----------eee
Q psy17243 93 AVWVADNAQLLYSALG---------PSKCLTVTHNMKYIVSG-D---GDNSLRIWPTSPQTHKDDE-----------RFT 148 (392)
Q Consensus 93 ~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~-~---~d~~i~~~d~~~~~~~~~~-----------~~~ 148 (392)
.+||+.+++.+..+.. ....+++++++..++++ . .++.|.+||+.++...... ...
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 9999998886554321 24688999865555444 3 5789999998744321100 000
Q ss_pred e-c--------------cccceEEEEEEcCCCEEEEeeCCC-cEEEEEcC---CCe-----EE--EEEecCCCceeEEEE
Q psy17243 149 V-S--------------HSEEITCFTVTWDSQYLITGSRDM-SLKVWQVV---GGK-----LA--QVLVGHTDHVSCVAV 202 (392)
Q Consensus 149 ~-~--------------~~~~v~~~~~~~~~~~l~~~~~dg-~i~i~d~~---~~~-----~~--~~~~~~~~~v~~~~~ 202 (392)
. + ....+..++|+|+++.|+.+...+ .+..++.. .+. .. ....++......+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 0 0 012368899999999888887765 55555432 110 00 011233445667899
Q ss_pred ecCCCcEEEEecCCCeEEEEECCCCceeeeecc-cccceeEEEEcCCCeEEEEcC
Q psy17243 203 AVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG-HLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 203 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+ +++.++++...++.|.+||..+++....... +.....+++|.++|++.++..
T Consensus 256 d-~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 256 D-KDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp C-TTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred C-CCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 9 5688889888899999999855654333322 245688999999999888865
No 219
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.44 E-value=1.9e-11 Score=115.12 Aligned_cols=250 Identities=12% Similarity=0.070 Sum_probs=167.3
Q ss_pred CccCCeEEEEECCCccceeeeccC-C----cCeeEEEecCCCCeEEEEeC------CCeEEEEeCCCCceeEEeccccc-
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGH-L----NTVSCVAISPNSIFAVSGSE------DNTAKVWGLTLGSVVSTFKSHQS- 69 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h-~----~~v~~~~~~~~~~~l~~~~~------dg~v~iwd~~~~~~~~~~~~~~~- 69 (392)
++.|+.|..+|..+++.+..+..+ . ..+.+--...++ .++.++. +|.|..+|.++|+.+-++.....
T Consensus 134 ~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 212 (677)
T 1kb0_A 134 GAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGD 212 (677)
T ss_dssp ECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCC
T ss_pred EcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCC
Confidence 467899999999999999887654 1 112111111133 4555543 69999999999998876653211
Q ss_pred -------------------------------ceEEEEEecCCCEEEEEeCCC-------------------eEEEEEcCC
Q psy17243 70 -------------------------------TILAVAVLSDSRRVVTSDKAG-------------------VIAVWVADN 99 (392)
Q Consensus 70 -------------------------------~v~~~~~~~~~~~l~~~~~d~-------------------~i~iwd~~~ 99 (392)
....+++.|++..++.+..++ .|..+|..+
T Consensus 213 ~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~T 292 (677)
T 1kb0_A 213 PSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDT 292 (677)
T ss_dssp TTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT
T ss_pred ccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCC
Confidence 113578889999998887664 599999999
Q ss_pred ceeeeecccc------------eeEEEEeCCC---CEEEEecCCCcEEEEeCCCCCCCCcceeee--------ccccce-
Q psy17243 100 AQLLYSALGP------------SKCLTVTHNM---KYIVSGDGDNSLRIWPTSPQTHKDDERFTV--------SHSEEI- 155 (392)
Q Consensus 100 ~~~~~~~~~~------------~~~~~~~~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~--------~~~~~v- 155 (392)
++.+..+... ...+....+| ..++.++.+|.++++|..+++......... ....++
T Consensus 293 G~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~ 372 (677)
T 1kb0_A 293 GKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIG 372 (677)
T ss_dssp CCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEE
T ss_pred CCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceee
Confidence 9987654321 1122233366 688999999999999998765432111100 000111
Q ss_pred -----------------------EEEEEEcCCCEEEEeeC----------------------------------------
Q psy17243 156 -----------------------TCFTVTWDSQYLITGSR---------------------------------------- 172 (392)
Q Consensus 156 -----------------------~~~~~~~~~~~l~~~~~---------------------------------------- 172 (392)
..++++|+..++++...
T Consensus 373 ~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~ 452 (677)
T 1kb0_A 373 IAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPK 452 (677)
T ss_dssp CGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCC
T ss_pred ccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCC
Confidence 15688998888887543
Q ss_pred ---CCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccc-cceeEEEEcCC
Q psy17243 173 ---DMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHL-GCVTCVKLAGD 248 (392)
Q Consensus 173 ---dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~d 248 (392)
.|.|..||+.+++.+..+. +..++....+. ..+.+++.++.||.+++||..+++.+..+.... ....-+.+..+
T Consensus 453 ~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~-~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~ 530 (677)
T 1kb0_A 453 SKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLT-TAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVD 530 (677)
T ss_dssp SCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCCccEEEEEeCCCCcEEeecC-CCCCCcCcceE-eCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeC
Confidence 2789999999999888776 33444444455 345577778999999999999999998886433 23345566788
Q ss_pred CeEEEE
Q psy17243 249 GTVAMS 254 (392)
Q Consensus 249 g~~~~~ 254 (392)
|+..+.
T Consensus 531 G~~~v~ 536 (677)
T 1kb0_A 531 GRQYVS 536 (677)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 875544
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=4.1e-10 Score=96.70 Aligned_cols=207 Identities=9% Similarity=0.008 Sum_probs=137.6
Q ss_pred ccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecc----cccceEEEEEec
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKS----HQSTILAVAVLS 78 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~ 78 (392)
..++.|..||.++++.. .+. ....+.+++++++++++++. .+ .|.+||.++++....... ....+..++++|
T Consensus 68 ~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~ 143 (326)
T 2ghs_A 68 ILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP 143 (326)
T ss_dssp GGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT
T ss_pred CCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC
Confidence 34678899998876543 333 35679999999999877654 44 499999988875433221 124688999999
Q ss_pred CCCEEEEEeC------CCeEEEEEcCCceeee--ecccceeEEEEeCCCCEEEEe-cCCCcEEEEeCC--CC-CCCCcce
Q psy17243 79 DSRRVVTSDK------AGVIAVWVADNAQLLY--SALGPSKCLTVTHNMKYIVSG-DGDNSLRIWPTS--PQ-THKDDER 146 (392)
Q Consensus 79 ~~~~l~~~~~------d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~-~~d~~i~~~d~~--~~-~~~~~~~ 146 (392)
+|+.+++... .+.|..++ +++... ........++++++++.++.+ ..++.|.+|++. ++ .......
T Consensus 144 ~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~ 221 (326)
T 2ghs_A 144 SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEV 221 (326)
T ss_dssp TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEE
T ss_pred CCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceE
Confidence 9987665432 24566666 444322 112345689999999877655 457899999985 33 2211111
Q ss_pred ee--eccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEe-cCCCcEEEEecCC
Q psy17243 147 FT--VSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVA-VTNKSLVVSGSKD 216 (392)
Q Consensus 147 ~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~~~d 216 (392)
+. .........+++.+++++.++...++.|.+||. +++.+..+..+...+++++|. +..+.++++...+
T Consensus 222 ~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 222 FIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 11 112345678999999987777666788999998 677777777666779999998 4444455555444
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.43 E-value=2.9e-11 Score=114.80 Aligned_cols=224 Identities=13% Similarity=0.063 Sum_probs=145.2
Q ss_pred cCCcCeeEEEecCCCCeEEEE-----eCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCC--------
Q psy17243 24 GHLNTVSCVAISPNSIFAVSG-----SEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAG-------- 90 (392)
Q Consensus 24 ~h~~~v~~~~~~~~~~~l~~~-----~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------- 90 (392)
+|...+..++|||||++||.+ +....|++||+++++.+.... +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 355678899999999988843 333579999999998755311 11123578999 999999888774
Q ss_pred -----eEEEEEcCCce----eeeeccc----ceeEEEEeCCCCEEEEecC----CCcEEEEeCCCCCCCCcceeeecccc
Q psy17243 91 -----VIAVWVADNAQ----LLYSALG----PSKCLTVTHNMKYIVSGDG----DNSLRIWPTSPQTHKDDERFTVSHSE 153 (392)
Q Consensus 91 -----~i~iwd~~~~~----~~~~~~~----~~~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~~~~~~~~~~~~~~ 153 (392)
.|++|++.+.+ .+..... ....+.++|++++|+.... .+.|+++|+..... .......+..
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~--~~~~l~~~~~ 281 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA--PLLTVQGDLD 281 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--CCEEEECSSS
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--ceEEEeCCCC
Confidence 39999998764 3444333 2467889999998866443 35899999875422 1222223444
Q ss_pred ceEEEEEEcCCCEEEEeeC----CCcEEEEEcCCCeE--EEEEecCCCceeEEEEecCCCcEEEEecCCC--eEEEEECC
Q psy17243 154 EITCFTVTWDSQYLITGSR----DMSLKVWQVVGGKL--AQVLVGHTDHVSCVAVAVTNKSLVVSGSKDS--NLIVWDME 225 (392)
Q Consensus 154 ~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~iwd~~ 225 (392)
..... +++++..|+..+. .+.|..+|+.++.. ...+..|...+. .|++.++.++++...++ .|++|++.
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 44444 6666666554443 36799999987654 345555665554 77755555555555565 68899987
Q ss_pred CCceeeeec-ccccceeEEEEcCCCeEEEEc
Q psy17243 226 TGGEEHFLA-GHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 226 ~~~~~~~~~-~~~~~v~~~~~~~dg~~~~~~ 255 (392)
.+ ....+. .....+..+.+++++..++..
T Consensus 359 g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 359 GK-RVREVALPGLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp SC-EEEEECCSSSSEEEECCCCTTCSCEEEE
T ss_pred CC-eeEEeecCCCceEEeeecCCCCCEEEEE
Confidence 44 444443 234566777777777655443
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.42 E-value=1.3e-13 Score=120.46 Aligned_cols=202 Identities=10% Similarity=0.039 Sum_probs=119.5
Q ss_pred CCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeeccccee-----
Q psy17243 37 NSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSALGPSK----- 111 (392)
Q Consensus 37 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----- 111 (392)
++..+++++.||.|+.||..+|+.+.++.. +.+.+..+..++..+++++.|+.|+.||.++++.+........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 466899999999999999999999888875 4555555666777788888999999999998887654432211
Q ss_pred EEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe
Q psy17243 112 CLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV 191 (392)
Q Consensus 112 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 191 (392)
...+. .+..+++++.++.|+.||..+++....... + . ...++|++..+++++.++.|+.||.++++.+..+.
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~---~-~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSS---A-F---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecC---C-C---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 11111 355788888899999999986654332221 1 1 13456688899999999999999999998765554
Q ss_pred cCCCceeEEEEecCC---CcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeE
Q psy17243 192 GHTDHVSCVAVAVTN---KSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTV 251 (392)
Q Consensus 192 ~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~ 251 (392)
.+. .....+. .+ +..++.++.||.|+.||..+++.+.........+....++++|.+
T Consensus 158 ~~~--~~~~~~~-~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 158 YFD--YAASLPE-DDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp EEE--ECCBCCC-CCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred ccc--ccCcccc-CCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceE
Confidence 221 1222233 21 145666788999999999999988776633323334455667754
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.40 E-value=5.5e-11 Score=101.20 Aligned_cols=212 Identities=10% Similarity=0.029 Sum_probs=137.5
Q ss_pred ccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEeccc----ccceEEEEEec
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSH----QSTILAVAVLS 78 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~ 78 (392)
..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|+.+ ++........ ...+..+++.+
T Consensus 64 ~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~ 140 (305)
T 3dr2_A 64 LVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVAR 140 (305)
T ss_dssp TTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECT
T ss_pred CCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECC
Confidence 35678888987 444 34555567778999999999876666566889999976 5543222111 13467899999
Q ss_pred CCCEEEE----EeC-------------CCeEEEEEcCCceeeee-cccceeEEEEeCCCCEEEEecCC------CcEEEE
Q psy17243 79 DSRRVVT----SDK-------------AGVIAVWVADNAQLLYS-ALGPSKCLTVTHNMKYIVSGDGD------NSLRIW 134 (392)
Q Consensus 79 ~~~~l~~----~~~-------------d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d------~~i~~~ 134 (392)
+|+.+++ +.. .+.|..+|..+++.... .......++++|+++.|+++... +.|.+|
T Consensus 141 dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~ 220 (305)
T 3dr2_A 141 DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAF 220 (305)
T ss_dssp TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC---CCCEEEEE
T ss_pred CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEE
Confidence 9998776 322 25678888766654322 22345689999999988887665 789999
Q ss_pred eCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEec
Q psy17243 135 PTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 135 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 214 (392)
++.....................+++.++|+ |+++..+ .|.+|+. +++.+..+.... .+.+++|. ++++.|+.++
T Consensus 221 ~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~-~d~~~L~it~ 295 (305)
T 3dr2_A 221 AWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFD-QAQQRLFITG 295 (305)
T ss_dssp EEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECT-TSCEEEEEECSS-CCCEEEEC-TTSCEEEEEE
T ss_pred EecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECC-CCCEEEEEECCC-ceeEEEEe-CCCCEEEEEc
Confidence 9864321111111111233445688999998 5555545 4999997 567777776544 58899999 5665555555
Q ss_pred CCCeEEEEE
Q psy17243 215 KDSNLIVWD 223 (392)
Q Consensus 215 ~dg~i~iwd 223 (392)
.++ +..++
T Consensus 296 ~~~-l~~~~ 303 (305)
T 3dr2_A 296 GPC-LWMLP 303 (305)
T ss_dssp TTE-EEEEE
T ss_pred CCe-EEEEE
Confidence 543 43333
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.39 E-value=3.4e-10 Score=92.42 Aligned_cols=208 Identities=11% Similarity=0.045 Sum_probs=145.9
Q ss_pred ccceeeeccCCcC--eeEEEecCCCCeEEEEeC--CCeEEEEeCCCCceeEEeccccc-ceEEEEEecCCCEEEEE-eCC
Q psy17243 16 HELQSTMEGHLNT--VSCVAISPNSIFAVSGSE--DNTAKVWGLTLGSVVSTFKSHQS-TILAVAVLSDSRRVVTS-DKA 89 (392)
Q Consensus 16 ~~~~~~~~~h~~~--v~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~-~~d 89 (392)
.+.+.++. |... ...+.|++++.+.++.+. ++.|.++|+.+++.+..+..... ....+++. +..|+.+ -.+
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 45566664 5543 579999998755554443 57999999999999988763222 22345554 4455544 467
Q ss_pred CeEEEEEcCCceeeeecccc-eeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeec--cccceEEEEEEcCCCE
Q psy17243 90 GVIAVWVADNAQLLYSALGP-SKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVS--HSEEITCFTVTWDSQY 166 (392)
Q Consensus 90 ~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~ 166 (392)
+.+.++|..+.+.+.++... .....++++++.++++..++.|.++|..+.+.......... .-..++.+.|. ++..
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred CEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEE
Confidence 89999999999988876543 34455777888888888889999999975543333322211 11235677887 6654
Q ss_pred EEEeeCCCcEEEEEcCCCeEEEEEecC-------------CCceeEEEEecCCCcEEEEecCCCeEEEEECCCC
Q psy17243 167 LITGSRDMSLKVWQVVGGKLAQVLVGH-------------TDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 167 l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
.+....++.|.+.|..+++.+..+... ....+.++++|..+.+++++...+.|.+.++...
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 444445789999999999998887632 1356899999777888999988999999987653
No 225
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.35 E-value=1e-08 Score=85.33 Aligned_cols=240 Identities=11% Similarity=0.027 Sum_probs=154.4
Q ss_pred CCeEEEEECCCccce-----eeeccCCcCeeEEEecCCCCeEE-EEeCCCeEEEEeCCCCceeEEecccccceEEEEEec
Q psy17243 5 DCLVNVWQMNSHELQ-----STMEGHLNTVSCVAISPNSIFAV-SGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLS 78 (392)
Q Consensus 5 dg~i~vwd~~~~~~~-----~~~~~h~~~v~~~~~~~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 78 (392)
.+.|+.+++...... ..+......+..++|++++..|+ +-..++.|..++.+.......+.........+++.+
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~ 88 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDH 88 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEET
T ss_pred CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEe
Confidence 357888888754321 11222234578999999655554 445678999999876654433332335678999999
Q ss_pred CCCEEEEE-eCCCeEEEEEcCCcee--eeec-ccceeEEEEeCCCCEEEEecC---CCcEEEEeCCCCCCCCcceeeecc
Q psy17243 79 DSRRVVTS-DKAGVIAVWVADNAQL--LYSA-LGPSKCLTVTHNMKYIVSGDG---DNSLRIWPTSPQTHKDDERFTVSH 151 (392)
Q Consensus 79 ~~~~l~~~-~~d~~i~iwd~~~~~~--~~~~-~~~~~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~ 151 (392)
++..|+.+ ...+.|.+++++.... +... ......++++|++..|+.+.. .+.|..+++.... ........
T Consensus 89 ~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~---~~~~~~~~ 165 (267)
T 1npe_A 89 LGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---RRILAQDN 165 (267)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC---CEEEECTT
T ss_pred cCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC---cEEEEECC
Confidence 76666555 4567899999875432 2111 135578999997666666554 3688888875321 11111122
Q ss_pred ccceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCcee
Q psy17243 152 SEEITCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEE 230 (392)
Q Consensus 152 ~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 230 (392)
......+++++++..|+.+. ..+.|.++|+........+.. ......++.. ++.++++...++.|.++|..+++.+
T Consensus 166 ~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 166 LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCce
Confidence 34578899999877666555 467899999875544333332 2334566654 5666666667789999999999988
Q ss_pred eeecccc-cceeEEEEcCCCe
Q psy17243 231 HFLAGHL-GCVTCVKLAGDGT 250 (392)
Q Consensus 231 ~~~~~~~-~~v~~~~~~~dg~ 250 (392)
..+.... .....+++.|++.
T Consensus 243 ~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 243 DTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEECCSSCCCCCCEEEECSCC
T ss_pred EEEccccccccceeeecCccC
Confidence 8876433 2467777777764
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.34 E-value=3.5e-13 Score=117.82 Aligned_cols=188 Identities=7% Similarity=0.012 Sum_probs=108.4
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEeccccc-ceE-EEEEecC
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQS-TIL-AVAVLSD 79 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~v~-~~~~~~~ 79 (392)
|+.||.|+.||..+++.+..+.. +.+.+..+..++..+++++.||.|+.||.++|+.+..+..+.. .+. +..+. .
T Consensus 15 gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~ 91 (369)
T 2hz6_A 15 STLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-S 91 (369)
T ss_dssp EETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC---
T ss_pred EcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-c
Confidence 67899999999999999988876 5666666667787888888999999999999988766653321 110 00111 3
Q ss_pred CCEEEEEeCCCeEEEEEcCCceeeeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEE
Q psy17243 80 SRRVVTSDKAGVIAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFT 159 (392)
Q Consensus 80 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~ 159 (392)
+..+++++.++.++.||..+++.+..+..+. ...++|++..+++++.++.|+.||.++++..-..... . .....
T Consensus 92 ~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~----~~~~~ 165 (369)
T 2hz6_A 92 DGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF-D----YAASL 165 (369)
T ss_dssp ---CCCCEEEEEEEEECCC-----------------------EEEEEEEEEEECCCSSSSSCCCEEEEE-E----ECCBC
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEecCCC-cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc-c----ccCcc
Confidence 4567888889999999999999877665432 2445668889999999999999999866543322211 1 11222
Q ss_pred EEcCC---CEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeE
Q psy17243 160 VTWDS---QYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSC 199 (392)
Q Consensus 160 ~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 199 (392)
+..+. ..+++++.+|.|..||.++++.+..+. ...++..
T Consensus 166 ~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~ 207 (369)
T 2hz6_A 166 PEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVA 207 (369)
T ss_dssp CCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEE
T ss_pred ccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEE
Confidence 33321 567788899999999999999887766 3344443
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.34 E-value=4.4e-10 Score=98.66 Aligned_cols=239 Identities=11% Similarity=0.066 Sum_probs=153.8
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccce-----EEEEE
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTI-----LAVAV 76 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v-----~~~~~ 76 (392)
++.++.|..+|.++++.+................ +..++.++.++.|..+|.++++.+..+....... .....
T Consensus 109 ~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 109 GSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred EcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 4568899999999999887766443222222222 3467888889999999999999887766432211 12222
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCceeeeeccccee----------EEEEeC--CCCEEEEecCCCcEEEEeCCCCCCCCc
Q psy17243 77 LSDSRRVVTSDKAGVIAVWVADNAQLLYSALGPSK----------CLTVTH--NMKYIVSGDGDNSLRIWPTSPQTHKDD 144 (392)
Q Consensus 77 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----------~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~ 144 (392)
. +..++++..++.+..+|..+++.+........ .+...| .+..+++++.++.+..+|..+++..
T Consensus 187 ~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~-- 262 (376)
T 3q7m_A 187 A--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIM-- 262 (376)
T ss_dssp E--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEE--
T ss_pred E--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEE--
Confidence 2 45788888899999999999988765432210 011111 3567888888999999998755322
Q ss_pred ceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEec-CCCceeEEEEecCCCcEEEEecCCCeEEEEE
Q psy17243 145 ERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVG-HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWD 223 (392)
Q Consensus 145 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 223 (392)
.... ......+.. ++..+++++.++.|..+|..+++.+..... ....+...... +..|+.++.+|.|.++|
T Consensus 263 --w~~~-~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~---~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 263 --WKRE-LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY---NGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp --EEEC-CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE---TTEEEEECTTSEEEEEE
T ss_pred --eecc-CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE---CCEEEEEeCCCeEEEEE
Confidence 1111 122333333 466888888899999999999998776652 22233333333 45677788899999999
Q ss_pred CCCCceeeeecccccceeEEEEcCCCeEEEE
Q psy17243 224 METGGEEHFLAGHLGCVTCVKLAGDGTVAMS 254 (392)
Q Consensus 224 ~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~ 254 (392)
..+++.+.........+.......++.+++.
T Consensus 335 ~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~ 365 (376)
T 3q7m_A 335 VEDGRFVAQQKVDSSGFQTEPVAADGKLLIQ 365 (376)
T ss_dssp TTTCCEEEEEECCTTCBCSCCEEETTEEEEE
T ss_pred CCCCcEEEEEecCCCcceeCCEEECCEEEEE
Confidence 9999988776653333332222235555554
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.34 E-value=4e-10 Score=107.00 Aligned_cols=221 Identities=14% Similarity=0.051 Sum_probs=140.8
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCC-------------eEEEEeCCCCce----eEEe
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDN-------------TAKVWGLTLGSV----VSTF 64 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg-------------~v~iwd~~~~~~----~~~~ 64 (392)
|+.+..|++||+.+++.+... .+......++|+ |++.|+.++.+. .|++|++.++.. +...
T Consensus 151 G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~ 228 (693)
T 3iuj_A 151 GSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA 228 (693)
T ss_dssp SCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESC
T ss_pred CCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEec
Confidence 445578999999999865431 122223678999 999998888774 399999987653 3333
Q ss_pred cc-cccceEEEEEecCCCEEEEEeC----CCeEEEEEcCCce--e--eeecccceeEEEEeCCCCEEEEecC----CCcE
Q psy17243 65 KS-HQSTILAVAVLSDSRRVVTSDK----AGVIAVWVADNAQ--L--LYSALGPSKCLTVTHNMKYIVSGDG----DNSL 131 (392)
Q Consensus 65 ~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~--~--~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i 131 (392)
.. |...+..+.|+||+++|+.... ...|+++|+.++. . +.......... +++++..|+..+. .+.|
T Consensus 229 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l 307 (693)
T 3iuj_A 229 IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRL 307 (693)
T ss_dssp SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEE
T ss_pred CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEE
Confidence 33 4456788999999998865443 2589999987763 2 22222222233 5666666555443 3678
Q ss_pred EEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCC---cEEEEEcCCCeEEEEEe-cCCCceeEEEEecCCC
Q psy17243 132 RIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDM---SLKVWQVVGGKLAQVLV-GHTDHVSCVAVAVTNK 207 (392)
Q Consensus 132 ~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 207 (392)
..+|+....... ......+...+. .|++++++|+....++ .|++||+..+. ...+. .....+..+.+++.+.
T Consensus 308 ~~~d~~~~~~~~-~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 308 VTVDAANPGPAH-WRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp EEEETTSCCGGG-CEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCS
T ss_pred EEEeCCCCCccc-cEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCC
Confidence 899987543211 122334444444 8899998887766543 68999987554 34443 2345566777775555
Q ss_pred cEEEEecC---CCeEEEEECCCCce
Q psy17243 208 SLVVSGSK---DSNLIVWDMETGGE 229 (392)
Q Consensus 208 ~~l~~~~~---dg~i~iwd~~~~~~ 229 (392)
.++++.+. -+.|..||+.+++.
T Consensus 384 ~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 384 ALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEEEEecCCCCCCEEEEEECCCCeE
Confidence 55555432 27899999987754
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.32 E-value=8.6e-10 Score=88.89 Aligned_cols=194 Identities=16% Similarity=0.175 Sum_probs=135.0
Q ss_pred cceeeeccCCcCe--eEEEecCCCCeEEEEeCCC--eEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEe-CCCe
Q psy17243 17 ELQSTMEGHLNTV--SCVAISPNSIFAVSGSEDN--TAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSD-KAGV 91 (392)
Q Consensus 17 ~~~~~~~~h~~~v--~~~~~~~~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~ 91 (392)
+.++++. |...- ..+.|+ ++.++.+.+.+| .|+++|+++++.+.++... .........+++..|.... .++.
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence 4455553 55443 789998 666667777766 8999999999999888743 3333333333455555554 5789
Q ss_pred EEEEEcCCceeeeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeee-ccc-cceEEEEEEcCCCEEEE
Q psy17243 92 IAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTV-SHS-EEITCFTVTWDSQYLIT 169 (392)
Q Consensus 92 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~~ 169 (392)
+.++|..+.+.+.++.-+.....+.+++..|+.+..++.|.++|..+.+......... +.. ..++.+.+. +|+..+.
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan 187 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFAN 187 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EEEEECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEE
Confidence 9999999999988877655556666788888888878899999998655443333321 111 334557776 6755544
Q ss_pred eeCCCcEEEEEcCCCeEEEEEecC------------CCceeEEEEecCCCcEEEEec
Q psy17243 170 GSRDMSLKVWQVVGGKLAQVLVGH------------TDHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 170 ~~~dg~i~i~d~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~l~~~~ 214 (392)
.-.+..|.+.|.++++.+..+... ....+.|+++|..+.++++|-
T Consensus 188 ~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 188 VWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 446889999999999998887532 135689999977777777774
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.31 E-value=3.8e-10 Score=101.48 Aligned_cols=254 Identities=11% Similarity=0.020 Sum_probs=174.0
Q ss_pred CCccCCeEEEEECCCccceeeec---------------------c------------C------CcCeeEEEecC-----
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTME---------------------G------------H------LNTVSCVAISP----- 36 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~---------------------~------------h------~~~v~~~~~~~----- 36 (392)
+|+..|.|+|+-+.+++.++.+. . + .+.......|.
T Consensus 20 s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g~~ 99 (595)
T 1fwx_A 20 SSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEGKY 99 (595)
T ss_dssp CCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETTEE
T ss_pred eCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCCCc
Confidence 68999999999998876655441 0 1 11222345554
Q ss_pred CCCeEEEEeC-CCeEEEEeCCCCceeEEecc-cccceEEEEE-e-cCCCEEEEEeC------------------CCeEEE
Q psy17243 37 NSIFAVSGSE-DNTAKVWGLTLGSVVSTFKS-HQSTILAVAV-L-SDSRRVVTSDK------------------AGVIAV 94 (392)
Q Consensus 37 ~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~~------------------d~~i~i 94 (392)
||++++.... ++.|.+.|+++.++.+.+.- .......+++ . |+++++++++. ++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 7777776654 56799999999998884432 2345788888 4 99999998852 357999
Q ss_pred EEcCCceeeeecc--cceeEEEEeCCCCEEEEecCCC--------------------------------------cEEEE
Q psy17243 95 WVADNAQLLYSAL--GPSKCLTVTHNMKYIVSGDGDN--------------------------------------SLRIW 134 (392)
Q Consensus 95 wd~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d~--------------------------------------~i~~~ 134 (392)
.|.++.+...+.. +....+.++|+++++++.+.+. .|.+.
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 9999988876654 3445788999999998887553 36666
Q ss_pred eCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCe------------EEEEEecCCCceeEEE
Q psy17243 135 PTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGS-RDMSLKVWQVVGGK------------LAQVLVGHTDHVSCVA 201 (392)
Q Consensus 135 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~------------~~~~~~~~~~~v~~~~ 201 (392)
|..+... ........-.....++.++|||+++++++ .+.+|.++|+.+.+ ...... -......++
T Consensus 260 D~~~~~~-~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~a 337 (595)
T 1fwx_A 260 DGRKEAS-SLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTA 337 (595)
T ss_dssp ECSGGGC-CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEE
T ss_pred eCcccCC-ceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEE
Confidence 7654211 11111222334567889999999877766 57899999998653 233332 234567889
Q ss_pred EecCCCcEEEEecCCCeEEEEECCC----------Cceeeeecccccce-----eEEEEcCCCeEEEEcCC
Q psy17243 202 VAVTNKSLVVSGSKDSNLIVWDMET----------GGEEHFLAGHLGCV-----TCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 202 ~~~~~~~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v-----~~~~~~~dg~~~~~~~~ 257 (392)
|+| ++...++.-.|+.|.+||+.+ .+.+..+..|..+- ..+.++|||+++++..+
T Consensus 338 F~~-dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 338 FDG-RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp ECT-TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred ECC-CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 994 556667777899999999987 45666666554432 23356899999998754
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.31 E-value=5.8e-10 Score=97.97 Aligned_cols=217 Identities=7% Similarity=-0.038 Sum_probs=139.5
Q ss_pred CCCCeEEEEeCC-----CeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEe----------CCCeEEEEEcCCc
Q psy17243 36 PNSIFAVSGSED-----NTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSD----------KAGVIAVWVADNA 100 (392)
Q Consensus 36 ~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~~ 100 (392)
++++.++++... +.|.++|..+++.+.++.....+ .+.++||+++++++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 466666655442 69999999999999999866666 899999999888876 4678999999999
Q ss_pred eeeeeccc----------ceeEEEEeCCCCEEEEecC--CCcEEEEeCCCCCCCCcceeeec----cccceEEEEEEc--
Q psy17243 101 QLLYSALG----------PSKCLTVTHNMKYIVSGDG--DNSLRIWPTSPQTHKDDERFTVS----HSEEITCFTVTW-- 162 (392)
Q Consensus 101 ~~~~~~~~----------~~~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~----~~~~v~~~~~~~-- 162 (392)
+.+..+.- ....+.++|++++++++.. ++.|.++|+.+.+....+..... ....-..+.+++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence 88776532 2457899999999999874 57899999986543322221000 000001122333
Q ss_pred -----------------------------------CCCEEEEeeCCCcEEEEEcCCCeEE--EEEec----------CCC
Q psy17243 163 -----------------------------------DSQYLITGSRDMSLKVWQVVGGKLA--QVLVG----------HTD 195 (392)
Q Consensus 163 -----------------------------------~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~----------~~~ 195 (392)
++..++.....+.+.+.|....... ..+.- ...
T Consensus 240 ~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 240 SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp SEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred CEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 3333333334455555555433211 11100 001
Q ss_pred ceeEEEEecCCCcEEEEec---------CCCeEEEEECCCCceeeeecccccceeEEEEcCCCe-EEEEc
Q psy17243 196 HVSCVAVAVTNKSLVVSGS---------KDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGT-VAMSD 255 (392)
Q Consensus 196 ~v~~~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~-~~~~~ 255 (392)
....++++|..+.++++.. .++.|.++|..+.+.+..+.. ......+.|+|||+ .+++.
T Consensus 320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~ 388 (426)
T 3c75_H 320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYAL 388 (426)
T ss_dssp SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEE
T ss_pred CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEE
Confidence 1123678855555555432 135799999999999998864 23588999999998 66664
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.31 E-value=1.5e-09 Score=94.37 Aligned_cols=211 Identities=9% Similarity=0.055 Sum_probs=140.8
Q ss_pred CccCCeEEEEECCCc----cceeeec------c-CCcCeeEEEecCCCCeEEEEeCC------CeEEEEeCCCCceeEEe
Q psy17243 2 GGMDCLVNVWQMNSH----ELQSTME------G-HLNTVSCVAISPNSIFAVSGSED------NTAKVWGLTLGSVVSTF 64 (392)
Q Consensus 2 g~~dg~i~vwd~~~~----~~~~~~~------~-h~~~v~~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~~~~~~ 64 (392)
|-.++.|.|+|+.+. ++.++++ . ....-..+...|+| +++++..+ |.|.++|.++++.+.++
T Consensus 102 ~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~ 180 (462)
T 2ece_A 102 GLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKW 180 (462)
T ss_dssp BTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEEC
T ss_pred cCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEE
Confidence 456788999999755 5666662 1 11234567788999 66666555 78999999999999988
Q ss_pred cccccc---eEEEEEecCCCEEEEEe-------------------CCCeEEEEEcCCceeeeecccc-----eeEEEE--
Q psy17243 65 KSHQST---ILAVAVLSDSRRVVTSD-------------------KAGVIAVWVADNAQLLYSALGP-----SKCLTV-- 115 (392)
Q Consensus 65 ~~~~~~---v~~~~~~~~~~~l~~~~-------------------~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~-- 115 (392)
.....+ -..+.|+|+++.+++.. ....|.+||+.+++.+.++... ...+.|
T Consensus 181 ~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~ 260 (462)
T 2ece_A 181 EIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLH 260 (462)
T ss_dssp CSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECS
T ss_pred ccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeE
Confidence 733222 34588899999888874 3689999999998777665442 234444
Q ss_pred eCCCCEEEEecC------CCcEEEEeCCCCCCCCcceeeec-----------------cccceEEEEEEcCCCEEEEeeC
Q psy17243 116 THNMKYIVSGDG------DNSLRIWPTSPQTHKDDERFTVS-----------------HSEEITCFTVTWDSQYLITGSR 172 (392)
Q Consensus 116 ~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~l~~~~~ 172 (392)
+|+++++++++. ++.|.+|....+........... .......+.+++|+++|+++..
T Consensus 261 ~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr 340 (462)
T 2ece_A 261 DPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW 340 (462)
T ss_dssp STTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET
T ss_pred CCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeC
Confidence 999999888774 56787665542111100000000 0245678999999999988876
Q ss_pred -CCcEEEEEcCC---CeEEEEEecCC--------------CceeEEEEecCCCcEEEEec
Q psy17243 173 -DMSLKVWQVVG---GKLAQVLVGHT--------------DHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 173 -dg~i~i~d~~~---~~~~~~~~~~~--------------~~v~~~~~~~~~~~~l~~~~ 214 (392)
.+.|.+||+.. .+.+..+.... ..-..++++ +++++|+.+.
T Consensus 341 g~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lS-pDGk~LyVaN 399 (462)
T 2ece_A 341 GIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEIS-RDGRRVYVTN 399 (462)
T ss_dssp TTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEEC-TTSSEEEEEC
T ss_pred CCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEc-CCCCEEEEEc
Confidence 68999999853 35555554221 135788999 5666666654
No 233
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.30 E-value=1e-08 Score=89.84 Aligned_cols=221 Identities=11% Similarity=0.029 Sum_probs=143.6
Q ss_pred CccCCeEEEEECCCccceeeeccC---------CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceE
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGH---------LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTIL 72 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h---------~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~ 72 (392)
++.++.|..+|.++++.+...... ...+.+.- ..++..++.++.++.|..+|.++|+.+-..........
T Consensus 59 ~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~ 137 (376)
T 3q7m_A 59 ADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALS 137 (376)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred EcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEc
Confidence 456789999999999988776542 12232221 12345678888899999999999998876654332211
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEEcCCceeeeeccccee--------EEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc
Q psy17243 73 AVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSALGPSK--------CLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD 144 (392)
Q Consensus 73 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 144 (392)
..... +..+++++.++.+..+|..+++.+........ .... .+..++++..++.+..+|..+++..-.
T Consensus 138 ~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 138 RPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp CCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred CCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 22222 45788889999999999999988765543211 1122 245788888899999999875543211
Q ss_pred ceeeecc-cc---c---e-EEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCC
Q psy17243 145 ERFTVSH-SE---E---I-TCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKD 216 (392)
Q Consensus 145 ~~~~~~~-~~---~---v-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 216 (392)
....... .. . + ....+ .+..+++++.++.+..+|.++++.+..... .....+... +..++.++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~---~~~l~~~~~~ 286 (376)
T 3q7m_A 214 QRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIVD---GNRIYLVDQN 286 (376)
T ss_dssp EECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEEE---TTEEEEEETT
T ss_pred EecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceEE---CCEEEEEcCC
Confidence 1110000 00 0 0 01111 256788888899999999999988766542 334444443 4456667789
Q ss_pred CeEEEEECCCCceeeeec
Q psy17243 217 SNLIVWDMETGGEEHFLA 234 (392)
Q Consensus 217 g~i~iwd~~~~~~~~~~~ 234 (392)
+.|..+|..+++.+....
T Consensus 287 g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 287 DRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp CCEEEEETTTCCEEEEEC
T ss_pred CeEEEEECCCCcEEEeec
Confidence 999999999999877665
No 234
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.28 E-value=1e-08 Score=89.22 Aligned_cols=217 Identities=12% Similarity=0.069 Sum_probs=142.6
Q ss_pred CCCCeEE-EEeCCCeEEEEeCCCC----ceeEEec-------ccccceEEEEEecCCCEEEEEeCC------CeEEEEEc
Q psy17243 36 PNSIFAV-SGSEDNTAKVWGLTLG----SVVSTFK-------SHQSTILAVAVLSDSRRVVTSDKA------GVIAVWVA 97 (392)
Q Consensus 36 ~~~~~l~-~~~~dg~v~iwd~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~ 97 (392)
+++++|+ .+-.++.|.++|+.+. +..+.+. .....-..+...|++ .++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 6777665 4667789999999755 5666663 112245667888999 66666555 78999999
Q ss_pred CCceeeeecccc------eeEEEEeCCCCEEEEec-------------------CCCcEEEEeCCCCCCCCcceeeec-c
Q psy17243 98 DNAQLLYSALGP------SKCLTVTHNMKYIVSGD-------------------GDNSLRIWPTSPQTHKDDERFTVS-H 151 (392)
Q Consensus 98 ~~~~~~~~~~~~------~~~~~~~~~~~~l~~~~-------------------~d~~i~~~d~~~~~~~~~~~~~~~-~ 151 (392)
++.+.+...... ...+.|+|+++.+++.. ...+|.+||+.+.+... .+..+ .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~--tI~vg~~ 249 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH--SLTLGEE 249 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE--EEESCTT
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee--EEecCCC
Confidence 999988776532 23478899999888885 36899999998542222 12221 1
Q ss_pred ccceEEEEE--EcCCCEEEEeeC------CCcEEEEEcCCCeE--EEEE--ecC----------------CCceeEEEEe
Q psy17243 152 SEEITCFTV--TWDSQYLITGSR------DMSLKVWQVVGGKL--AQVL--VGH----------------TDHVSCVAVA 203 (392)
Q Consensus 152 ~~~v~~~~~--~~~~~~l~~~~~------dg~i~i~d~~~~~~--~~~~--~~~----------------~~~v~~~~~~ 203 (392)
......+.| +|++++++++++ +++|.+|....++. .+.+ ... ......|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 233445555 999999888774 56888776655431 1111 110 1346788999
Q ss_pred cCCCcEEE-EecCCCeEEEEECCC---Cceeeeecccc--------------cceeEEEEcCCCeEEEEcC
Q psy17243 204 VTNKSLVV-SGSKDSNLIVWDMET---GGEEHFLAGHL--------------GCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 204 ~~~~~~l~-~~~~dg~i~iwd~~~---~~~~~~~~~~~--------------~~v~~~~~~~dg~~~~~~~ 256 (392)
+ ++++|. +.-..+.|.+||+.. .+.+..+.... +.-..++++|||++++...
T Consensus 330 ~-DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 330 L-DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp T-TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred C-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 4 555554 444578999999863 34444443210 1257899999999888764
No 235
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.26 E-value=1.4e-09 Score=87.66 Aligned_cols=192 Identities=13% Similarity=0.077 Sum_probs=133.4
Q ss_pred cceeeeccCCcC--eeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEE--EEEecCCCEEEEEeCCCeE
Q psy17243 17 ELQSTMEGHLNT--VSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILA--VAVLSDSRRVVTSDKAGVI 92 (392)
Q Consensus 17 ~~~~~~~~h~~~--v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~d~~i 92 (392)
+.+.++. |... ...+.|+. +.+..+.+.+|.|+++|+++++.+.++ . ...... +++.. ++..+..-.++.+
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v 118 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEE
T ss_pred EEEEEEc-CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEE
Confidence 3445553 5433 46888874 566777888899999999999998887 3 233333 44432 2344445568999
Q ss_pred EEEEcCCceeeeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeec--cccceEEEEEEcCCCEEEEe
Q psy17243 93 AVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVS--HSEEITCFTVTWDSQYLITG 170 (392)
Q Consensus 93 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~ 170 (392)
.+||..+.+.+.++..+.....+.++++.|+.+..++.|.++|..+.+.......... .-..++.+.|. +|+..+..
T Consensus 119 ~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanv 197 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANI 197 (268)
T ss_dssp EEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred EEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEE
Confidence 9999999999887765544455557788888888899999999886554433333221 11244667776 67544444
Q ss_pred eCCCcEEEEEcCCCeEEEEEecC-------------CCceeEEEEecCCCcEEEEec
Q psy17243 171 SRDMSLKVWQVVGGKLAQVLVGH-------------TDHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 171 ~~dg~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~~~~ 214 (392)
-.+..|.+.|.++++.+..+... ....+.|+++|..+.++++|-
T Consensus 198 w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 198 WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 46789999999999988887531 135689999987888888874
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.26 E-value=1.2e-09 Score=94.59 Aligned_cols=197 Identities=8% Similarity=-0.028 Sum_probs=131.0
Q ss_pred cCCcCeeEEEecCCCCeEEEEeC-----CCeEEEEeCCCCceeEEeccc------ccceEEEEEecCCCEEEEE-e---C
Q psy17243 24 GHLNTVSCVAISPNSIFAVSGSE-----DNTAKVWGLTLGSVVSTFKSH------QSTILAVAVLSDSRRVVTS-D---K 88 (392)
Q Consensus 24 ~h~~~v~~~~~~~~~~~l~~~~~-----dg~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~-~---~ 88 (392)
.|...+..++++++++++++-.. ++.|.+||+.+++.+..+... ...+..+++.+++..++.+ . .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 35578999999999876655433 578999999999877766532 2346899999865555444 3 5
Q ss_pred CCeEEEEEcCCceeeeecc--------------------------------cceeEEEEeCCCCEEEEecCCC-cEEEEe
Q psy17243 89 AGVIAVWVADNAQLLYSAL--------------------------------GPSKCLTVTHNMKYIVSGDGDN-SLRIWP 135 (392)
Q Consensus 89 d~~i~iwd~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~l~~~~~d~-~i~~~d 135 (392)
++.|.+||+.+++...... .....++++|+++.|+++...+ .+..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 7899999998776544221 1246799999999888887765 555554
Q ss_pred CCC---CCCC-----CcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEec-CCCceeEEEEecCC
Q psy17243 136 TSP---QTHK-----DDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVG-HTDHVSCVAVAVTN 206 (392)
Q Consensus 136 ~~~---~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~ 206 (392)
... .... .... ..++......++++++++++++...++.|.+||..+++....... +......+++. ++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~-~~ 301 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIE-RYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFG-SD 301 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCE-EEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEEC-TT
T ss_pred HHHhcCCCCChhhhhcceE-ecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEEC-CC
Confidence 321 0000 0001 112333556789999999988888899999999856764333322 23467899998 45
Q ss_pred CcEEEEecCCCeEEEE
Q psy17243 207 KSLVVSGSKDSNLIVW 222 (392)
Q Consensus 207 ~~~l~~~~~dg~i~iw 222 (392)
+.++++.+..+.+.+|
T Consensus 302 g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 302 GYLYFDCNQLHHSAPL 317 (343)
T ss_dssp SCEEEEECCGGGSGGG
T ss_pred CcEEEEeCcccccccc
Confidence 7777776655444433
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.21 E-value=1.4e-08 Score=81.14 Aligned_cols=192 Identities=11% Similarity=0.072 Sum_probs=132.1
Q ss_pred cceeeeccCCc--CeeEEEecCCCCeEEEEeCC--CeEEEEeCCCCceeEEecccccc-eEEEEEecCCCEEE-EEeCCC
Q psy17243 17 ELQSTMEGHLN--TVSCVAISPNSIFAVSGSED--NTAKVWGLTLGSVVSTFKSHQST-ILAVAVLSDSRRVV-TSDKAG 90 (392)
Q Consensus 17 ~~~~~~~~h~~--~v~~~~~~~~~~~l~~~~~d--g~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~-~~~~d~ 90 (392)
+.+.++ .|.. -...+.|++ +.++.+.+.+ ..|+.+|+++++.+.++...... -..+++. +..|+ ..-.++
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence 455566 3654 356899987 5555666665 48999999999999888643322 1234443 44444 445688
Q ss_pred eEEEEEcCCceeeeecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccc---cceEEEEEEcCCCEE
Q psy17243 91 VIAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHS---EEITCFTVTWDSQYL 167 (392)
Q Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l 167 (392)
.+.++|..+.+.+.++..+.....+.+++..|+++..++.|.++|..+.+......... +. ..++.+.+. +++..
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEEEEEE-TTEEE
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CCcccccceeeEEe-CCEEE
Confidence 99999999999988776555555666778888888889999999998654443333321 11 244566665 56555
Q ss_pred EEeeCCCcEEEEEcCCCeEEEEEecC-------------CCceeEEEEecCCCcEEEEec
Q psy17243 168 ITGSRDMSLKVWQVVGGKLAQVLVGH-------------TDHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 168 ~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~~~~ 214 (392)
+..-.+..|.+.|.++++.+..+... ....+.|+++|..+.++++|-
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 44446789999999999998887521 135689999977788888774
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.21 E-value=3.2e-09 Score=91.26 Aligned_cols=231 Identities=13% Similarity=0.046 Sum_probs=148.0
Q ss_pred EEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEe
Q psy17243 8 VNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSD 87 (392)
Q Consensus 8 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 87 (392)
|..+|. +++....+...........+. +..|..++.++.|..+|.+ ++...........+.++...+++. ++.++
T Consensus 80 l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt 154 (330)
T 3hxj_A 80 VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGS 154 (330)
T ss_dssp EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEEC
T ss_pred EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEc
Confidence 777775 566655554333333333333 3457778888999999988 777766665555566667766665 66678
Q ss_pred CCCeEEEEEcCCceeeeecc---cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCC
Q psy17243 88 KAGVIAVWVADNAQLLYSAL---GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDS 164 (392)
Q Consensus 88 ~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 164 (392)
.++.|..+|.. ++.+.... ..+.++...+++... +++ +.|..+| .++. ...........+.++...+++
T Consensus 155 ~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~---~~~~~~~~~~~~~~~~~~~~g 226 (330)
T 3hxj_A 155 NDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGT---EKWNFYAGYWTVTRPAISEDG 226 (330)
T ss_dssp TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSC---EEEEECCSSCCCSCCEECTTS
T ss_pred CCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCc---EEEEEccCCcceeceEECCCC
Confidence 88999999998 66554432 234556666677644 444 8888998 3221 111122233556777777776
Q ss_pred CEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEE
Q psy17243 165 QYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVK 244 (392)
Q Consensus 165 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 244 (392)
. |+.++.++.|..+|. +++.+..+......+..+... .++ .|..++.+|.|..+|. +++.+..+......+.++.
T Consensus 227 ~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~-~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~ 301 (330)
T 3hxj_A 227 T-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIG-NTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPV 301 (330)
T ss_dssp C-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEEC-TTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCE
T ss_pred e-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEc-CCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceE
Confidence 4 566677788988884 566666665444444555554 344 4556777889999996 6777766665556777888
Q ss_pred EcCCCeEEEEcC
Q psy17243 245 LAGDGTVAMSDL 256 (392)
Q Consensus 245 ~~~dg~~~~~~~ 256 (392)
..++|++.+...
T Consensus 302 ~d~~g~l~~gt~ 313 (330)
T 3hxj_A 302 IDENGTIYFGTR 313 (330)
T ss_dssp ECTTCCEEEECT
T ss_pred EcCCCEEEEEcC
Confidence 888888777653
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.16 E-value=5.4e-09 Score=98.43 Aligned_cols=249 Identities=12% Similarity=0.111 Sum_probs=158.0
Q ss_pred CccCCeEEEEECCCccceeeeccCCc-CeeEEEecC---CCCeEEEEeC------CCeEEEEeCCCCceeEEecccc---
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLN-TVSCVAISP---NSIFAVSGSE------DNTAKVWGLTLGSVVSTFKSHQ--- 68 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~---~~~~l~~~~~------dg~v~iwd~~~~~~~~~~~~~~--- 68 (392)
++.|+.|..+|..+|+.+..+..... ....+.-+| ++ .++.+.. +|.|..+|.++|+.+-++....
T Consensus 123 ~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p 201 (668)
T 1kv9_A 123 GTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDP 201 (668)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCT
T ss_pred EcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCC
Confidence 46789999999999999887764211 001111122 34 4555433 5899999999999987764210
Q ss_pred ----------------------------cceEEEEEecCCCEEEEEeCCC-------------------eEEEEEcCCce
Q psy17243 69 ----------------------------STILAVAVLSDSRRVVTSDKAG-------------------VIAVWVADNAQ 101 (392)
Q Consensus 69 ----------------------------~~v~~~~~~~~~~~l~~~~~d~-------------------~i~iwd~~~~~ 101 (392)
.....+++.|+...++.+..++ .|..+|..+++
T Consensus 202 ~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~ 281 (668)
T 1kv9_A 202 ALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK 281 (668)
T ss_dssp TSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC
T ss_pred CccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc
Confidence 0112468888888888887776 39999999999
Q ss_pred eeeeccc------------ceeEEEEeCCCC---EEEEecCCCcEEEEeCCCCCCCCcceee-------e--ccccc---
Q psy17243 102 LLYSALG------------PSKCLTVTHNMK---YIVSGDGDNSLRIWPTSPQTHKDDERFT-------V--SHSEE--- 154 (392)
Q Consensus 102 ~~~~~~~------------~~~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~-------~--~~~~~--- 154 (392)
.+..+.. +.....+..+++ .++.++.+|.++++|..+++........ . ....+
T Consensus 282 ~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~ 361 (668)
T 1kv9_A 282 LAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEA 361 (668)
T ss_dssp EEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEEC
T ss_pred eeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCcccc
Confidence 8765542 112222334564 6889999999999998876543111000 0 00000
Q ss_pred ---------------------eEEEEEEcCCCEEEEee------------------------------------CCCcEE
Q psy17243 155 ---------------------ITCFTVTWDSQYLITGS------------------------------------RDMSLK 177 (392)
Q Consensus 155 ---------------------v~~~~~~~~~~~l~~~~------------------------------------~dg~i~ 177 (392)
-..++++|+..++++.. .+|.|.
T Consensus 362 ~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~ 441 (668)
T 1kv9_A 362 PGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALL 441 (668)
T ss_dssp TTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEE
T ss_pred ccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEE
Confidence 01267788766666421 247899
Q ss_pred EEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccce-eEEEEcCCCeEEE
Q psy17243 178 VWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCV-TCVKLAGDGTVAM 253 (392)
Q Consensus 178 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~dg~~~~ 253 (392)
.||+.+++.+-+...+. +.....+. ..+.+++.++.|+.|+.||.++++.+..+....... .-+.+..+|+..+
T Consensus 442 A~D~~tG~~~W~~~~~~-~~~~~~~~-t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yv 516 (668)
T 1kv9_A 442 AWDPVKQKAAWKVPYPT-HWNGGTLS-TAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYV 516 (668)
T ss_dssp EEETTTTEEEEEEEESS-SCCCCEEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EEeCCCCcEEEEccCCC-CCcCceeE-eCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEE
Confidence 99999999887766432 33333344 346677788999999999999999998876543211 2334456776433
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=1.4e-08 Score=95.61 Aligned_cols=205 Identities=10% Similarity=0.081 Sum_probs=140.7
Q ss_pred cCCeEEEEECCCccceeeeccCCcC--------------------------------eeEEEecCCCCeEEEEeCCC---
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNT--------------------------------VSCVAISPNSIFAVSGSEDN--- 48 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~--------------------------------v~~~~~~~~~~~l~~~~~dg--- 48 (392)
.+|.|+.+|..+++++..+...... ...++++|++.+++.+..++
T Consensus 188 ~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w 267 (677)
T 1kb0_A 188 VRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPW 267 (677)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESS
T ss_pred CCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccc
Confidence 3799999999999998776532211 13578889888888877664
Q ss_pred ----------------eEEEEeCCCCceeEEecc--cc-------cceEEEEEecCC---CEEEEEeCCCeEEEEEcCCc
Q psy17243 49 ----------------TAKVWGLTLGSVVSTFKS--HQ-------STILAVAVLSDS---RRVVTSDKAGVIAVWVADNA 100 (392)
Q Consensus 49 ----------------~v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~ 100 (392)
.|..+|.++|+.+-.++. |. ....-+....+| ..++.++.+|.++++|..++
T Consensus 268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG 347 (677)
T 1kb0_A 268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG 347 (677)
T ss_dssp CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC
Confidence 599999999999877653 21 122223344467 67899999999999999999
Q ss_pred eeeeecccc--------------e------------------------eEEEEeCCCCEEEEecC---------------
Q psy17243 101 QLLYSALGP--------------S------------------------KCLTVTHNMKYIVSGDG--------------- 127 (392)
Q Consensus 101 ~~~~~~~~~--------------~------------------------~~~~~~~~~~~l~~~~~--------------- 127 (392)
+.+...... + ..++++|+..++++...
T Consensus 348 ~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g 427 (677)
T 1kb0_A 348 KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFN 427 (677)
T ss_dssp CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTT
T ss_pred CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccc
Confidence 887543210 0 14678888888877543
Q ss_pred ----------------------------CCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEE
Q psy17243 128 ----------------------------DNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVW 179 (392)
Q Consensus 128 ----------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 179 (392)
.+.|..||+.+++.. ....+..++....+..++.+++.++.||.+++|
T Consensus 428 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~----W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~ 503 (677)
T 1kb0_A 428 QAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA----WSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAY 503 (677)
T ss_dssp CCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE----EEEEESSSCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred cccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE----eecCCCCCCcCcceEeCCCEEEEECCCCcEEEE
Confidence 167889998755432 222233344445566778899999999999999
Q ss_pred EcCCCeEEEEEecCC-CceeEEEEecCCCcEEEE
Q psy17243 180 QVVGGKLAQVLVGHT-DHVSCVAVAVTNKSLVVS 212 (392)
Q Consensus 180 d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~ 212 (392)
|.++++.+..+.... ....-+.+...+..+++.
T Consensus 504 D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 504 HAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp ETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred ECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 999999998886433 223345555344445444
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.13 E-value=1.1e-08 Score=96.49 Aligned_cols=207 Identities=12% Similarity=0.090 Sum_probs=139.5
Q ss_pred cCCeEEEEECCCccceeeeccC-------------------------------CcCeeEEEecCCCCeEEEEeCCCe---
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGH-------------------------------LNTVSCVAISPNSIFAVSGSEDNT--- 49 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h-------------------------------~~~v~~~~~~~~~~~l~~~~~dg~--- 49 (392)
.+|.|+.||..+|+++..+..- ......++++|+..+++.+..++.
T Consensus 181 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 181 VRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWD 260 (689)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccc
Confidence 4789999999999988776421 011135788898888888887764
Q ss_pred ----------------EEEEeCCCCceeEEecc--cc-------cceEEEEEecCCC---EEEEEeCCCeEEEEEcCCce
Q psy17243 50 ----------------AKVWGLTLGSVVSTFKS--HQ-------STILAVAVLSDSR---RVVTSDKAGVIAVWVADNAQ 101 (392)
Q Consensus 50 ----------------v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~ 101 (392)
|..+|.++|+.+-.++. |. .+........+++ .++.++.+|.++++|..+++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 99999999999877764 21 1222223333565 78889999999999999998
Q ss_pred eeeeccc-c-----------------------------------------eeEEEEeCCCCEEEEecC------------
Q psy17243 102 LLYSALG-P-----------------------------------------SKCLTVTHNMKYIVSGDG------------ 127 (392)
Q Consensus 102 ~~~~~~~-~-----------------------------------------~~~~~~~~~~~~l~~~~~------------ 127 (392)
.+..... + -..++++|+..++++...
T Consensus 341 ~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 420 (689)
T 1yiq_A 341 LLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA 420 (689)
T ss_dssp EEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSC
T ss_pred EeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccc
Confidence 8732110 0 012678888888777532
Q ss_pred ---------------------------------CCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCC
Q psy17243 128 ---------------------------------DNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDM 174 (392)
Q Consensus 128 ---------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 174 (392)
+|.|..||+.+++..-. ..+..+...-.+...+.+++.++.||
T Consensus 421 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~----~~~~~~~~~g~~~tagglvf~gt~dg 496 (689)
T 1yiq_A 421 PKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWE----VPYVTIFNGGTLSTAGNLVFEGSADG 496 (689)
T ss_dssp CCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEE----EEESSSCCCCEEEETTTEEEEECTTS
T ss_pred ccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeE----ccCCCCccCccceECCCEEEEECCCC
Confidence 36788899875543221 12223333335566788999999999
Q ss_pred cEEEEEcCCCeEEEEEecCCCc-eeEEEEecCCCcEEEEec
Q psy17243 175 SLKVWQVVGGKLAQVLVGHTDH-VSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 175 ~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~ 214 (392)
.++.||.++++.+.++...... ..-+.|...+..+++..+
T Consensus 497 ~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 497 RVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred cEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEEe
Confidence 9999999999999888744322 234566545555655443
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.13 E-value=1.6e-09 Score=93.09 Aligned_cols=234 Identities=12% Similarity=0.055 Sum_probs=149.7
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCC
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSR 81 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 81 (392)
|+.++.|..|| .+++....+..+...+.++...+++. |..++.+ |..+|. +++.+..+...........+. +.
T Consensus 36 ~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~ 108 (330)
T 3hxj_A 36 GSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--ED 108 (330)
T ss_dssp SSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TT
T ss_pred EcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CC
Confidence 56678899999 88887776665555567777777775 5555544 888885 666554444333222233333 55
Q ss_pred EEEEEeCCCeEEEEEcCCceeeeeccc---ceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEE
Q psy17243 82 RVVTSDKAGVIAVWVADNAQLLYSALG---PSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCF 158 (392)
Q Consensus 82 ~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~ 158 (392)
.+.+++.++.+..+|.. ++....... .+.++...+++. +++++.++.|..+|.. +... . ........+.++
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~--~-~~~~~~~~~~~~ 182 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEK--W-RFKTNDAITSAA 182 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEE--E-EEECSSCCCSCC
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEe--E-EEecCCCceeee
Confidence 78888889999999998 665544322 234555665665 6667788999999986 2221 1 111223445666
Q ss_pred EEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccccc
Q psy17243 159 TVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLG 238 (392)
Q Consensus 159 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 238 (392)
.+.+++.+. .++ +.|..+| .+++....+......+.++... .++. +..++.++.|..+|. +++.+..+.....
T Consensus 183 ~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~-~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~ 255 (330)
T 3hxj_A 183 SIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAIS-EDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKR 255 (330)
T ss_dssp EECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCCCSCCEEC-TTSC-EEEEETTTEEEEECT-TSCEEEEEECSSC
T ss_pred EEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcceeceEEC-CCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCC
Confidence 666677644 444 7899999 7777777766555667888877 4444 445666788888874 5666666654444
Q ss_pred ceeEEEEcCCCeEEEEc
Q psy17243 239 CVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 239 ~v~~~~~~~dg~~~~~~ 255 (392)
.+..+...++|.+.+..
T Consensus 256 ~~~~~~~~~~g~l~v~t 272 (330)
T 3hxj_A 256 IESSPVIGNTDTIYFGS 272 (330)
T ss_dssp CCSCCEECTTSCEEEEC
T ss_pred ccccceEcCCCeEEEec
Confidence 45566677777776654
No 243
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.11 E-value=4.2e-09 Score=90.98 Aligned_cols=199 Identities=8% Similarity=-0.040 Sum_probs=128.6
Q ss_pred eEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEe----------CCCeEEEEEcCCceeeeecccc---------
Q psy17243 49 TAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSD----------KAGVIAVWVADNAQLLYSALGP--------- 109 (392)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~--------- 109 (392)
.|.++|..+++.+.++.....+ .+.++|++++++++. .++.|.+||+.+++.+.++..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999999866666 799999999998886 3688999999999998876432
Q ss_pred -eeEEEEeCCCCEEEEecC--CCcEEE--EeCCCCCCCCccee------eec---------cccceEEEE----------
Q psy17243 110 -SKCLTVTHNMKYIVSGDG--DNSLRI--WPTSPQTHKDDERF------TVS---------HSEEITCFT---------- 159 (392)
Q Consensus 110 -~~~~~~~~~~~~l~~~~~--d~~i~~--~d~~~~~~~~~~~~------~~~---------~~~~v~~~~---------- 159 (392)
...+.++|++++++++.. +..+.+ +|..+ ...... ... ..+.+..+.
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 468999999999999875 467888 88853 000000 000 000000000
Q ss_pred ----------------EEcCCCEEEEeeCCCcEEEEEcCCCe--EEEEEec-------C---CCceeEEEEecCCCcEEE
Q psy17243 160 ----------------VTWDSQYLITGSRDMSLKVWQVVGGK--LAQVLVG-------H---TDHVSCVAVAVTNKSLVV 211 (392)
Q Consensus 160 ----------------~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~-------~---~~~v~~~~~~~~~~~~l~ 211 (392)
..+++..++..+. +.+.+.|+.... .+..+.- + ......++++|+.+.+++
T Consensus 202 v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV 280 (368)
T 1mda_H 202 VGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280 (368)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred EEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEE
Confidence 1334444444444 677777775432 2222210 0 011122678855555554
Q ss_pred Eec---C-----CCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEE
Q psy17243 212 SGS---K-----DSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMS 254 (392)
Q Consensus 212 ~~~---~-----dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~ 254 (392)
+.. . ++.+.++|+.+.+.+..+.... ....++|+|||+.++.
T Consensus 281 ~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~v 330 (368)
T 1mda_H 281 LTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNY 330 (368)
T ss_dssp EEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEE
T ss_pred EeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEE
Confidence 433 2 2356699999999998887543 6889999999984433
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.09 E-value=2.8e-08 Score=91.64 Aligned_cols=250 Identities=12% Similarity=-0.019 Sum_probs=155.2
Q ss_pred CccCCeEEEEECCCccceeeeccCC--c--CeeE-EEecCCCCeEEEEeC------CCeEEEEeCCCCceeEEecccccc
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHL--N--TVSC-VAISPNSIFAVSGSE------DNTAKVWGLTLGSVVSTFKSHQST 70 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~--~--~v~~-~~~~~~~~~l~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~ 70 (392)
++.|+.|..+|..+++.+....... . .+.+ .... ++ .++.++. ++.|..+|.++|+.+-++......
T Consensus 121 ~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 198 (571)
T 2ad6_A 121 KQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSD 198 (571)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCH
T ss_pred EeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCc
Confidence 4568999999999999887764321 1 1211 1111 44 4555544 799999999999988766532110
Q ss_pred --------------------------------------eEEEEEecCCCEEEEEeCC----------------CeEEEEE
Q psy17243 71 --------------------------------------ILAVAVLSDSRRVVTSDKA----------------GVIAVWV 96 (392)
Q Consensus 71 --------------------------------------v~~~~~~~~~~~l~~~~~d----------------~~i~iwd 96 (392)
...+++.++...++.+..+ +.|..+|
T Consensus 199 ~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald 278 (571)
T 2ad6_A 199 DSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRD 278 (571)
T ss_dssp HHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEE
T ss_pred cccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEe
Confidence 0235667776777776542 3599999
Q ss_pred cCCceeeeecccc---------eeE---EEEeCCCC---EEEEecCCCcEEEEeCCCCCCCCcceeee----------cc
Q psy17243 97 ADNAQLLYSALGP---------SKC---LTVTHNMK---YIVSGDGDNSLRIWPTSPQTHKDDERFTV----------SH 151 (392)
Q Consensus 97 ~~~~~~~~~~~~~---------~~~---~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~----------~~ 151 (392)
.++++.+..+... ... +....+++ .++.++.+|.++++|..+++..-...... ..
T Consensus 279 ~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~ 358 (571)
T 2ad6_A 279 LDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKT 358 (571)
T ss_dssp TTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTT
T ss_pred cCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccC
Confidence 9999887654321 111 12224663 57788889999999987664322111100 00
Q ss_pred ccce--------------------------EEEEEEcCCCEEEEee----------------------------------
Q psy17243 152 SEEI--------------------------TCFTVTWDSQYLITGS---------------------------------- 171 (392)
Q Consensus 152 ~~~v--------------------------~~~~~~~~~~~l~~~~---------------------------------- 171 (392)
..++ ..++++|+..++++..
T Consensus 359 g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 438 (571)
T 2ad6_A 359 GTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGP 438 (571)
T ss_dssp CSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTST
T ss_pred CceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCcccc
Confidence 0111 2457888877777653
Q ss_pred ---CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccc-eeEEEEcC
Q psy17243 172 ---RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGC-VTCVKLAG 247 (392)
Q Consensus 172 ---~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~ 247 (392)
.+|.|..||+.+++.+.++... ..+....+. ..+.+++.++.||.|+.+|.++++.+.++...... -.-+.+..
T Consensus 439 ~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~-t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~ 516 (571)
T 2ad6_A 439 TKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLY-TKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSF 516 (571)
T ss_dssp TSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred CCCCCCeEEEEECCCCCEEEEecCC-CCccceeEE-ECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEE
Confidence 3478999999999988776532 233322223 23456666889999999999999999887643321 12234557
Q ss_pred CCeEEEEc
Q psy17243 248 DGTVAMSD 255 (392)
Q Consensus 248 dg~~~~~~ 255 (392)
+|++++..
T Consensus 517 ~G~~yv~~ 524 (571)
T 2ad6_A 517 KGKQYIGS 524 (571)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 88766653
No 245
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.04 E-value=6.1e-08 Score=89.39 Aligned_cols=249 Identities=13% Similarity=0.035 Sum_probs=152.8
Q ss_pred CccCCeEEEEECCCccceeeeccCCc----CeeE-EEecCCCCeEEEEe------CCCeEEEEeCCCCceeEEecccccc
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLN----TVSC-VAISPNSIFAVSGS------EDNTAKVWGLTLGSVVSTFKSHQST 70 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~----~v~~-~~~~~~~~~l~~~~------~dg~v~iwd~~~~~~~~~~~~~~~~ 70 (392)
++.|+.|..+|..+|+.+........ .+.+ .... ++ .+++++ .+|.|..+|.++|+.+-++......
T Consensus 127 ~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~ 204 (599)
T 1w6s_A 127 TQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPD 204 (599)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCH
T ss_pred EcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCc
Confidence 45688999999999998877543210 1211 1111 44 455554 3799999999999988766532111
Q ss_pred -------------------------------------e-EEEEEecCCCEEEEEeCC----------------CeEEEEE
Q psy17243 71 -------------------------------------I-LAVAVLSDSRRVVTSDKA----------------GVIAVWV 96 (392)
Q Consensus 71 -------------------------------------v-~~~~~~~~~~~l~~~~~d----------------~~i~iwd 96 (392)
+ ..+++.++...++.+..+ +.|..+|
T Consensus 205 ~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald 284 (599)
T 1w6s_A 205 KDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRD 284 (599)
T ss_dssp HHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEE
T ss_pred cccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEe
Confidence 0 135666777788877665 3799999
Q ss_pred cCCceeeeecccce----------eEEEEe---CCC---CEEEEecCCCcEEEEeCCCCCCCCcceeee----------c
Q psy17243 97 ADNAQLLYSALGPS----------KCLTVT---HNM---KYIVSGDGDNSLRIWPTSPQTHKDDERFTV----------S 150 (392)
Q Consensus 97 ~~~~~~~~~~~~~~----------~~~~~~---~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~----------~ 150 (392)
.++++.+..+.... .-+.+. .++ ..++.++.+|.++++|..+++..-...... .
T Consensus 285 ~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~ 364 (599)
T 1w6s_A 285 ADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLK 364 (599)
T ss_dssp TTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTT
T ss_pred CCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccC
Confidence 99999876544310 111222 466 567778899999999987665332111100 0
Q ss_pred cccce--------------------------EEEEEEcCCCEEEEee---------------------------------
Q psy17243 151 HSEEI--------------------------TCFTVTWDSQYLITGS--------------------------------- 171 (392)
Q Consensus 151 ~~~~v--------------------------~~~~~~~~~~~l~~~~--------------------------------- 171 (392)
...++ ..++++|+..++++..
T Consensus 365 ~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~ 444 (599)
T 1w6s_A 365 TGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKG 444 (599)
T ss_dssp TCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTS
T ss_pred CCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcC
Confidence 00011 2356676665555421
Q ss_pred ------CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccc-eeEEE
Q psy17243 172 ------RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGC-VTCVK 244 (392)
Q Consensus 172 ------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~ 244 (392)
..|.|..||+.+++.+-+... ..+...-.+. ..+.+++.++.|+.|+.||.++|+.+.+++..... ..-+.
T Consensus 445 ~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~-tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~ 522 (599)
T 1w6s_A 445 DRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMA-TAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMT 522 (599)
T ss_dssp BTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred CcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceE-ecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEE
Confidence 347899999999988776642 2222211122 23556677899999999999999999877643322 22355
Q ss_pred EcCCCeEEEE
Q psy17243 245 LAGDGTVAMS 254 (392)
Q Consensus 245 ~~~dg~~~~~ 254 (392)
+..+|+..+.
T Consensus 523 y~~~G~qyv~ 532 (599)
T 1w6s_A 523 YTHKGTQYVA 532 (599)
T ss_dssp EEETTEEEEE
T ss_pred EEeCCEEEEE
Confidence 5678875443
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.03 E-value=3.5e-08 Score=88.95 Aligned_cols=223 Identities=8% Similarity=-0.021 Sum_probs=153.3
Q ss_pred cCCeEEEEECCCccceeeecc-CCcCeeEEEe-c-CCCCeEEEEe------------------CCCeEEEEeCCCCceeE
Q psy17243 4 MDCLVNVWQMNSHELQSTMEG-HLNTVSCVAI-S-PNSIFAVSGS------------------EDNTAKVWGLTLGSVVS 62 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~-~-~~~~~l~~~~------------------~dg~v~iwd~~~~~~~~ 62 (392)
.++.|.+.|+.+.+..+.+.- .......+++ + |+++++++++ .++.+.+.|.++.+...
T Consensus 110 ~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~ 189 (595)
T 1fwx_A 110 ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAW 189 (595)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEE
Confidence 467799999999998885542 2345788888 5 8999998884 34689999999999888
Q ss_pred EecccccceEEEEEecCCCEEEEEeCCC--------------------------------------eEEEEEcCC--cee
Q psy17243 63 TFKSHQSTILAVAVLSDSRRVVTSDKAG--------------------------------------VIAVWVADN--AQL 102 (392)
Q Consensus 63 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------------------------------~i~iwd~~~--~~~ 102 (392)
++.-.. .-..++++|+|+++++.+.+. .|.+.|..+ ++.
T Consensus 190 qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~ 268 (595)
T 1fwx_A 190 QVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSL 268 (595)
T ss_dssp EEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCS
T ss_pred EEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCce
Confidence 887433 456788999999998887553 356666666 333
Q ss_pred -eeecc--cceeEEEEeCCCCEEEEec-CCCcEEEEeCCCCCC--------CCcceeeeccccceEEEEEEcCCCEEEEe
Q psy17243 103 -LYSAL--GPSKCLTVTHNMKYIVSGD-GDNSLRIWPTSPQTH--------KDDERFTVSHSEEITCFTVTWDSQYLITG 170 (392)
Q Consensus 103 -~~~~~--~~~~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 170 (392)
+..+. ....++.++|||+++++++ .+..|.++|+.+... .........-......++|+++|....+.
T Consensus 269 ~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~ 348 (595)
T 1fwx_A 269 FTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSL 348 (595)
T ss_dssp SEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEE
T ss_pred eEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEE
Confidence 23332 2456899999999887766 578999999974310 01112222344667889999999434455
Q ss_pred eCCCcEEEEEcCC----------CeEEEEEecCCCcee-----EEEEecCCCcEEEEecC---CCe----------EEEE
Q psy17243 171 SRDMSLKVWQVVG----------GKLAQVLVGHTDHVS-----CVAVAVTNKSLVVSGSK---DSN----------LIVW 222 (392)
Q Consensus 171 ~~dg~i~i~d~~~----------~~~~~~~~~~~~~v~-----~~~~~~~~~~~l~~~~~---dg~----------i~iw 222 (392)
..|+.|.+||+.+ .+.+.++..|-.+-. .+.++ +++++|++... |+. -.++
T Consensus 349 ~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~-~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~ 427 (595)
T 1fwx_A 349 FLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLD-ATNDWLVCLSKFSKDRFLNVGPLKPENDQLI 427 (595)
T ss_dssp TTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTT-CCSSEEEEEESCCTTSSCCCCSSCCEEEEEE
T ss_pred ecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeC-CCCCEEEEcCCCCccccccCCCCCCCcceEE
Confidence 5699999999977 567777776654331 22335 67888877653 332 2889
Q ss_pred ECCCCc
Q psy17243 223 DMETGG 228 (392)
Q Consensus 223 d~~~~~ 228 (392)
|+..++
T Consensus 428 dis~~~ 433 (595)
T 1fwx_A 428 DISGDK 433 (595)
T ss_dssp ECSSSS
T ss_pred EcCCCc
Confidence 996554
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.03 E-value=1.5e-07 Score=76.81 Aligned_cols=187 Identities=7% Similarity=-0.041 Sum_probs=126.0
Q ss_pred ceeEEeccccc--ceEEEEEecCCCEEEEEeC--CCeEEEEEcCCceeeeeccc--c--eeEEEEeCCCCEEEE-ecCCC
Q psy17243 59 SVVSTFKSHQS--TILAVAVLSDSRRVVTSDK--AGVIAVWVADNAQLLYSALG--P--SKCLTVTHNMKYIVS-GDGDN 129 (392)
Q Consensus 59 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~--~--~~~~~~~~~~~~l~~-~~~d~ 129 (392)
+.+.++. |.. ....+.|++++..+++.+. ++.|.++|+.+++.+..... . ...+++. ++.++. .-.++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 4455665 443 3589999998644444433 57999999999998876542 2 1234444 445554 44578
Q ss_pred cEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCC-----CceeEEEEec
Q psy17243 130 SLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHT-----DHVSCVAVAV 204 (392)
Q Consensus 130 ~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~ 204 (392)
.+.++|..+.+...... .+... ...+++|++.++++..++.|.++|..+.+.+..+.-.. ..++.+.|.
T Consensus 87 ~v~viD~~t~~v~~~i~--~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFT--HQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp EEEEEETTTTEEEEEEE--CCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEEEECCCCcEEEEEE--CCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 99999997543332222 12011 23466788877777788999999999988887765321 135677887
Q ss_pred CCCcEEEEecCCCeEEEEECCCCceeeeecccc-------------cceeEEEEcCCCeEEEEc
Q psy17243 205 TNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHL-------------GCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 205 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~~~dg~~~~~~ 255 (392)
++.+++....++.|.+.|..+++.+..+.... ...+.++|+|+++.+...
T Consensus 161 -dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT 223 (266)
T 2iwa_A 161 -NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT 223 (266)
T ss_dssp -TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE
T ss_pred -CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE
Confidence 46666666678999999999999988776321 255899999998655443
No 248
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.01 E-value=5.4e-08 Score=78.50 Aligned_cols=186 Identities=10% Similarity=0.065 Sum_probs=125.2
Q ss_pred ceeEEecccccc--eEEEEEecCCCEEEEEeCCC--eEEEEEcCCceeeeecccc--eeEEEEeCCCCEEEEec-CCCcE
Q psy17243 59 SVVSTFKSHQST--ILAVAVLSDSRRVVTSDKAG--VIAVWVADNAQLLYSALGP--SKCLTVTHNMKYIVSGD-GDNSL 131 (392)
Q Consensus 59 ~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~-~d~~i 131 (392)
+.+.++. |... ...+.|+ ++..+.+.+.+| .|+.+|+.+++.+.....+ ....-+.+.++.|+... .++.+
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEE
Confidence 3455664 5443 4788898 666666777766 8999999999988766432 22222333455555554 58899
Q ss_pred EEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecC--C---CceeEEEEecCC
Q psy17243 132 RIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGH--T---DHVSCVAVAVTN 206 (392)
Q Consensus 132 ~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~v~~~~~~~~~ 206 (392)
.+||..+.+....... .. ....++++++.|+.+..++.|.++|..+.+.+..+.-. . ..++.+.|. +
T Consensus 110 ~v~D~~t~~~~~ti~~--~~----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~ 181 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNY--DG----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--D 181 (262)
T ss_dssp EEEETTTCCEEEEEEC--SS----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--T
T ss_pred EEEECccCcEEEEEEC--CC----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--C
Confidence 9999975544333322 11 22334567888888777889999999999888776542 1 234557776 5
Q ss_pred CcEEEEecCCCeEEEEECCCCceeeeeccc------------ccceeEEEEcCCCeEEEE
Q psy17243 207 KSLVVSGSKDSNLIVWDMETGGEEHFLAGH------------LGCVTCVKLAGDGTVAMS 254 (392)
Q Consensus 207 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------~~~v~~~~~~~dg~~~~~ 254 (392)
+.+.+..-.++.|.+.|..+++.+..+... ....+.++++|+++.+..
T Consensus 182 G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 182 GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence 666666667889999999999998876532 125589999997655444
No 249
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.00 E-value=1e-07 Score=88.06 Aligned_cols=251 Identities=13% Similarity=0.092 Sum_probs=153.0
Q ss_pred CccCCeEEEEECCCccceeeeccCCc----Cee-EEEecC---CCC-eEEEEe------CCCeEEEEeCCCCceeEEecc
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLN----TVS-CVAISP---NSI-FAVSGS------EDNTAKVWGLTLGSVVSTFKS 66 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~----~v~-~~~~~~---~~~-~l~~~~------~dg~v~iwd~~~~~~~~~~~~ 66 (392)
++.|+.|..+|.++|+.+........ .+. ...... +++ .+++++ .++.|.-+|.++|+.+-....
T Consensus 123 ~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~ 202 (582)
T 1flg_A 123 GTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF 202 (582)
T ss_dssp EETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEES
T ss_pred EeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCC
Confidence 45688999999999998877653221 111 111111 233 566654 378999999999998765532
Q ss_pred cccc-----------------------------------------eEEEEEecCCCEEEEEeC-----------------
Q psy17243 67 HQST-----------------------------------------ILAVAVLSDSRRVVTSDK----------------- 88 (392)
Q Consensus 67 ~~~~-----------------------------------------v~~~~~~~~~~~l~~~~~----------------- 88 (392)
.... -..+++.|+...++.+..
T Consensus 203 ~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~ 282 (582)
T 1flg_A 203 VEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNP 282 (582)
T ss_dssp STTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCS
T ss_pred CccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcc
Confidence 1100 013466677777777663
Q ss_pred ---C----CeEEEEEcCCceeeeecccc----------eeEEEEe---CCC---CEEEEecCCCcEEEEeCCCCCCCCcc
Q psy17243 89 ---A----GVIAVWVADNAQLLYSALGP----------SKCLTVT---HNM---KYIVSGDGDNSLRIWPTSPQTHKDDE 145 (392)
Q Consensus 89 ---d----~~i~iwd~~~~~~~~~~~~~----------~~~~~~~---~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~ 145 (392)
| +.|..+|..+++.+..+... ..-+... .++ ..++.++.+|.++++|..+++..-..
T Consensus 283 ~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 283 HDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp TTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 2 58999999999987765321 1112222 456 37888999999999998765432111
Q ss_pred eeee----------cccc--------------------------------ceEEEEEEcCCCEEEEee------------
Q psy17243 146 RFTV----------SHSE--------------------------------EITCFTVTWDSQYLITGS------------ 171 (392)
Q Consensus 146 ~~~~----------~~~~--------------------------------~v~~~~~~~~~~~l~~~~------------ 171 (392)
.... .... .-..++++|+..++++..
T Consensus 363 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~ 442 (582)
T 1flg_A 363 PFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEV 442 (582)
T ss_dssp ESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCC
T ss_pred ccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccc
Confidence 1100 0000 001345666655554432
Q ss_pred ---------------------CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCcee
Q psy17243 172 ---------------------RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEE 230 (392)
Q Consensus 172 ---------------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 230 (392)
.+|.|..||+.+++.+-+..... ++..-... ..+.+++.++.|+.|+.||.++++.+
T Consensus 443 ~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~-tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 443 SYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLA-TAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEE-ETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceE-eCCCEEEEECCCCcEEEEECCCCCEE
Confidence 25789999999999887765332 22221222 23556777999999999999999999
Q ss_pred eeecccccce-eEEEEcCCCeEEEE
Q psy17243 231 HFLAGHLGCV-TCVKLAGDGTVAMS 254 (392)
Q Consensus 231 ~~~~~~~~~v-~~~~~~~dg~~~~~ 254 (392)
.+++...... .-+.+..+|+..+.
T Consensus 521 W~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 521 WKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp EEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEecCCCCcccCceEEEECCEEEEE
Confidence 8887543322 23666678875554
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.98 E-value=2.7e-06 Score=70.45 Aligned_cols=211 Identities=9% Similarity=0.016 Sum_probs=129.6
Q ss_pred CeEEEEeCCCeEEEEeCCCCcee-----EEecccccceEEEEEecCCCEEEEEe-CCCeEEEEEcCCceeeeec---ccc
Q psy17243 39 IFAVSGSEDNTAKVWGLTLGSVV-----STFKSHQSTILAVAVLSDSRRVVTSD-KAGVIAVWVADNAQLLYSA---LGP 109 (392)
Q Consensus 39 ~~l~~~~~dg~v~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~---~~~ 109 (392)
++|+.+.. +.|+.++++..... ..+.........+++++++..|+.+. ..+.|..+++......... ...
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 45555543 47888887754321 12222234578999999776666555 5689999999876433222 135
Q ss_pred eeEEEEeCCCCEEEEe-cCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC---CCcEEEEEcCCCe
Q psy17243 110 SKCLTVTHNMKYIVSG-DGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR---DMSLKVWQVVGGK 185 (392)
Q Consensus 110 ~~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~ 185 (392)
...+++++++..++.+ ...+.|.++++.... ..............++++|++..|+.+.. .+.|..+++...
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~---~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~- 156 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ---RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT- 156 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCC---EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-
Confidence 6789999976555554 456889999986322 11111122245689999997666666554 368888887543
Q ss_pred EEEEEe-cCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 186 LAQVLV-GHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 186 ~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
....+. ..-.....+++++.++.++++-...+.|.++|+........+.. ......++.. ++.+.+++.
T Consensus 157 ~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~ 226 (267)
T 1npe_A 157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDW 226 (267)
T ss_dssp CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEET
T ss_pred CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEEC
Confidence 223332 22345788999965667777777789999999975443333332 2233456654 455555543
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.97 E-value=7.3e-07 Score=76.20 Aligned_cols=216 Identities=10% Similarity=0.013 Sum_probs=135.7
Q ss_pred ccCCeEEEEECCCccceeeecc--------------------CCcCeeEEEecC-CCCeEEEEeCCCeEEEEeCCCCcee
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEG--------------------HLNTVSCVAISP-NSIFAVSGSEDNTAKVWGLTLGSVV 61 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~--------------------h~~~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~ 61 (392)
..++.|..|+..+++.. .+.. .......+++.+ +++ |+.+...+.|..+|..+++.
T Consensus 37 ~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~- 113 (322)
T 2fp8_A 37 VQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHA- 113 (322)
T ss_dssp CTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTTEEEEECTTCEEC-
T ss_pred cCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEE-
Confidence 45678888887654432 2210 113578899998 665 55554455688888775532
Q ss_pred EEecc-----cccceEEEEEec-CCCEEEEEeC-----------------CCeEEEEEcCCceeeee--cccceeEEEEe
Q psy17243 62 STFKS-----HQSTILAVAVLS-DSRRVVTSDK-----------------AGVIAVWVADNAQLLYS--ALGPSKCLTVT 116 (392)
Q Consensus 62 ~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~--~~~~~~~~~~~ 116 (392)
..+.. .......+++.+ +|+..++-.. ++.|..+|..+++.... .......++++
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~ 193 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVS 193 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEEC
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEEC
Confidence 22211 113468899999 8876665432 36788899877654322 12345679999
Q ss_pred CCCCEEEEe-cCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC----------CCcEEEEEcCCCe
Q psy17243 117 HNMKYIVSG-DGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR----------DMSLKVWQVVGGK 185 (392)
Q Consensus 117 ~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~ 185 (392)
++++.|+++ ...+.|.+|++....... ......... ...+++.++|++.++... .+.|..+|. .++
T Consensus 194 ~dg~~lyv~d~~~~~I~~~~~~~~~~~~-~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~ 270 (322)
T 2fp8_A 194 ADSSFVLVAEFLSHQIVKYWLEGPKKGT-AEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGN 270 (322)
T ss_dssp TTSSEEEEEEGGGTEEEEEESSSTTTTC-EEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSC
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCcCCc-cceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCC
Confidence 999877666 556899999987432211 111111223 678899999986666544 467888886 477
Q ss_pred EEEEEecCC----CceeEEEEecCCCcEEEEecCCCeEEEEECCC
Q psy17243 186 LAQVLVGHT----DHVSCVAVAVTNKSLVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 186 ~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 226 (392)
.+..+.... ..++.+++. ++.++++...++.|..+++..
T Consensus 271 ~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 271 ILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEEECCTTTTTSCCCEEEEE--TTEEEEECSSCSEEEEEEC--
T ss_pred EEEEEECCCCCccccceEEEEe--CCEEEEeecCCCceEEEeccc
Confidence 776665432 346666664 567777777788999998763
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.94 E-value=9.3e-07 Score=75.54 Aligned_cols=221 Identities=13% Similarity=0.068 Sum_probs=138.2
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecc--------------------cccceEEEEEecCCCEEEEE
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKS--------------------HQSTILAVAVLSDSRRVVTS 86 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~~ 86 (392)
....++++.+++++++++..++.|..|+..+++.. .+.. .......+++.++...|+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 34567899999987888888999999998765433 2210 11357889999744456666
Q ss_pred eCCCeEEEEEcCCcee--eeec-c----cceeEEEEeC-CCCEEEEecC-----------------CCcEEEEeCCCCCC
Q psy17243 87 DKAGVIAVWVADNAQL--LYSA-L----GPSKCLTVTH-NMKYIVSGDG-----------------DNSLRIWPTSPQTH 141 (392)
Q Consensus 87 ~~d~~i~iwd~~~~~~--~~~~-~----~~~~~~~~~~-~~~~l~~~~~-----------------d~~i~~~d~~~~~~ 141 (392)
...+.+..+|..+++. +... . .....+++.+ +++..++-.. ++.|..||......
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 6566688888876643 2111 1 1346788999 8876665432 36788888753321
Q ss_pred CCcceeeeccccceEEEEEEcCCCEEEEe-eCCCcEEEEEcCCCe--EEEEEecCCCceeEEEEecCCCcEEEEecC---
Q psy17243 142 KDDERFTVSHSEEITCFTVTWDSQYLITG-SRDMSLKVWQVVGGK--LAQVLVGHTDHVSCVAVAVTNKSLVVSGSK--- 215 (392)
Q Consensus 142 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--- 215 (392)
............++++++++.|+.+ ...+.|.+|++.... ....+....+ ...+++. +++++.++...
T Consensus 178 ----~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d-~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 178 ----TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRN-ADGHFWVSSSEELD 251 (322)
T ss_dssp ----EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEEC-TTSCEEEEEEEETT
T ss_pred ----EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEEC-CCCCEEEEecCccc
Confidence 1111122345678999999876665 456899999987421 1112211223 6788888 56666665543
Q ss_pred -------CCeEEEEECCCCceeeeecccc----cceeEEEEcCCCeEEEEcC
Q psy17243 216 -------DSNLIVWDMETGGEEHFLAGHL----GCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 216 -------dg~i~iwd~~~~~~~~~~~~~~----~~v~~~~~~~dg~~~~~~~ 256 (392)
.+.|..+|.. ++.+..+.... ..+..+++ .++++.+.+.
T Consensus 252 ~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~ 301 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTL 301 (322)
T ss_dssp SSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECS
T ss_pred ccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeec
Confidence 4678888864 77666665432 34666666 4677777754
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.94 E-value=6.3e-06 Score=69.80 Aligned_cols=233 Identities=11% Similarity=0.026 Sum_probs=139.6
Q ss_pred ccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCC--CeEE
Q psy17243 16 HELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKA--GVIA 93 (392)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~ 93 (392)
.+.+..+... .....++|+++++++++-..++.|..||.+. +....+. .......+++.++++.+++.... ..|.
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~ 98 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVV 98 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEE
Confidence 4445555432 4577899999998777766789999999765 3333333 34568899999999865555432 2477
Q ss_pred EEEcCCceeeee--ccc--ceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc-----ce--eeeccccceEEEEEEc
Q psy17243 94 VWVADNAQLLYS--ALG--PSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD-----ER--FTVSHSEEITCFTVTW 162 (392)
Q Consensus 94 iwd~~~~~~~~~--~~~--~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-----~~--~~~~~~~~v~~~~~~~ 162 (392)
.+|..+++.... ... ....++..+++..+++-..++.|.++|......... .. .....-...+.+ ++
T Consensus 99 ~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~ 176 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR 176 (306)
T ss_dssp EEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE
T ss_pred EEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc
Confidence 777777764321 111 123444445554444444688899988753210000 00 000111234455 78
Q ss_pred CCCEEEEee-CCCcEEEEEcCC-CeE--EEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceee--eeccc
Q psy17243 163 DSQYLITGS-RDMSLKVWQVVG-GKL--AQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH--FLAGH 236 (392)
Q Consensus 163 ~~~~l~~~~-~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~ 236 (392)
+++.|+.+. ..+.|..|++.. ++. ...+.. ......+++. ++++++++....+.|.++|.. ++... .+...
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd-~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~ 253 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFD-VEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG 253 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEB-TTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEEC-CCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc
Confidence 887666554 567899999864 321 122211 1345678888 567787777778899999975 65532 33333
Q ss_pred ccceeEEEEc---CCCe-EEEEcC
Q psy17243 237 LGCVTCVKLA---GDGT-VAMSDL 256 (392)
Q Consensus 237 ~~~v~~~~~~---~dg~-~~~~~~ 256 (392)
....++++|. +|+. +.++..
T Consensus 254 ~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 254 VIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CTTEEEEEECCSTTTTTEEEEEEC
T ss_pred cCCceEEEEecccCCCCEEEEECC
Confidence 3568899998 7855 444443
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.93 E-value=4.9e-06 Score=72.88 Aligned_cols=234 Identities=11% Similarity=0.003 Sum_probs=146.3
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCC-eEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEE
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSI-FAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRV 83 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 83 (392)
...|+..++...+....+. .......++|.+.+. ++++-...+.|..++++.......+.........+++.+.+..|
T Consensus 95 ~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 173 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 173 (386)
T ss_dssp BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEE
T ss_pred CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeE
Confidence 3457777776555444443 334578999997554 44455567889999988765444443333445778888765555
Q ss_pred EE-EeCCCeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecC-C-CcEEEEeCCCCCCCCcceeeeccccceEE
Q psy17243 84 VT-SDKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDG-D-NSLRIWPTSPQTHKDDERFTVSHSEEITC 157 (392)
Q Consensus 84 ~~-~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~-d-~~i~~~d~~~~~~~~~~~~~~~~~~~v~~ 157 (392)
+. -...+.|.+.+++....... .......+++.|.+..|+.... . +.|..+++... .........-.....
T Consensus 174 Y~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---~~~~~~~~~~~~PnG 250 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS---GRRIIADTHLFWPNG 250 (386)
T ss_dssp EEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---SCEEEECSSCSCEEE
T ss_pred EEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC---CcEEEEECCCCCeee
Confidence 44 45567888888875432221 1235678999987776666544 3 67888887632 222222223345789
Q ss_pred EEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccc
Q psy17243 158 FTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGH 236 (392)
Q Consensus 158 ~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 236 (392)
++++|++..|+.+. ..+.|..+|+........+.........+++. .+.++++-...+.|..++..+++.+..+...
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECS
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEECCCCcceEEEccC
Confidence 99998766666554 46789999986543333333334456677774 4567777778889999997777776666543
Q ss_pred ccceeEEE
Q psy17243 237 LGCVTCVK 244 (392)
Q Consensus 237 ~~~v~~~~ 244 (392)
......++
T Consensus 329 ~~~p~gi~ 336 (386)
T 3v65_B 329 LHFPMDIH 336 (386)
T ss_dssp CSCCCCEE
T ss_pred CCCCceEE
Confidence 33333343
No 255
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.93 E-value=1.4e-05 Score=67.92 Aligned_cols=223 Identities=14% Similarity=0.053 Sum_probs=142.0
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeE-EEEeCCCeEEEEeCCC----CceeEEecccccceEEEEEecC
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFA-VSGSEDNTAKVWGLTL----GSVVSTFKSHQSTILAVAVLSD 79 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~ 79 (392)
...|+..|+.+.+....+. .......++|++.+..| ++-...+.|..++++. ......+...-.....+++.+.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 4578999998776655554 34567899999865544 4555668999999876 2222223222234578899875
Q ss_pred CCEEE-EEeCCCeEEEEEcCCceee--ee-cccceeEEEEeCCCCEEEEecCC--CcEEEEeCCCCCCCCcceeeecccc
Q psy17243 80 SRRVV-TSDKAGVIAVWVADNAQLL--YS-ALGPSKCLTVTHNMKYIVSGDGD--NSLRIWPTSPQTHKDDERFTVSHSE 153 (392)
Q Consensus 80 ~~~l~-~~~~d~~i~iwd~~~~~~~--~~-~~~~~~~~~~~~~~~~l~~~~~d--~~i~~~d~~~~~~~~~~~~~~~~~~ 153 (392)
+..|+ +-...+.|.+.++...... .. .......++++|.+..|+.+... +.|..+++... .........-.
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~---~~~~~~~~~~~ 164 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---DIYSLVTENIQ 164 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---CEEEEECSSCS
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC---CeEEEEECCCC
Confidence 55554 4456789999998765332 21 22356789999876666655543 68888887532 11111112335
Q ss_pred ceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEE-ec--CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCce
Q psy17243 154 EITCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVL-VG--HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGE 229 (392)
Q Consensus 154 ~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~-~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 229 (392)
....+++++++..|+.+. ..+.|..+|+.... .+.+ .. .......+++. .+.++++-...+.|..++..+++.
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcc
Confidence 678999998877766655 46789999986432 2333 21 22345677775 467777777788999999888876
Q ss_pred eeeec
Q psy17243 230 EHFLA 234 (392)
Q Consensus 230 ~~~~~ 234 (392)
+..+.
T Consensus 242 ~~~i~ 246 (316)
T 1ijq_A 242 VNLLA 246 (316)
T ss_dssp CEEEE
T ss_pred eEEEe
Confidence 66554
No 256
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.92 E-value=1.2e-05 Score=69.29 Aligned_cols=224 Identities=12% Similarity=0.038 Sum_probs=141.1
Q ss_pred CeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEE-EEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEE
Q psy17243 6 CLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAV-SGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVV 84 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 84 (392)
..|+..++...+....+. .......++|++....|+ +-...+.|..++++.......+.........+++.+.+..|+
T Consensus 53 ~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly 131 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLY 131 (349)
T ss_dssp SCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEE
T ss_pred cceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEE
Confidence 456666665544333333 334578999997555444 545678899999887654443333334457889987655554
Q ss_pred -EEeCCCeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEec-CC-CcEEEEeCCCCCCCCcceeeeccccceEEE
Q psy17243 85 -TSDKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGD-GD-NSLRIWPTSPQTHKDDERFTVSHSEEITCF 158 (392)
Q Consensus 85 -~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-~d-~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~ 158 (392)
+-...+.|.+.+++....... .......++++|.+..|+... .. +.|..+++..... .......-.....+
T Consensus 132 ~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGl 208 (349)
T 3v64_C 132 WTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGL 208 (349)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EESCCSSCSCEEEE
T ss_pred EEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc---EEEEECCCCCcceE
Confidence 445568899999876533221 123567899998666655554 34 7888888763221 11111233457899
Q ss_pred EEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc
Q psy17243 159 TVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG 235 (392)
Q Consensus 159 ~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 235 (392)
+++|++..|+.+. ..+.|..+|+........+.........+++. .+.++++-...+.|..++..+++.+..+..
T Consensus 209 a~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 209 TIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCCccEEecc
Confidence 9998776666654 46789999986543333333334456677774 466777777788999998777776666543
No 257
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.90 E-value=1.8e-05 Score=69.66 Aligned_cols=234 Identities=14% Similarity=0.033 Sum_probs=146.5
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEE-EEeCCCeEEEEeCCCC----ceeEEecccccceEEEEEecC
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAV-SGSEDNTAKVWGLTLG----SVVSTFKSHQSTILAVAVLSD 79 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-~~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~ 79 (392)
...|+..++........+. ....+..++|++....|+ +-...+.|..++++.. .....+.........+++.+.
T Consensus 91 ~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 3567777776554444333 456788999998655454 4455688999988652 223333333456788999885
Q ss_pred CCEEE-EEeCCCeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecC--CCcEEEEeCCCCCCCCcceeeecccc
Q psy17243 80 SRRVV-TSDKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDG--DNSLRIWPTSPQTHKDDERFTVSHSE 153 (392)
Q Consensus 80 ~~~l~-~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~ 153 (392)
+..|+ +-...+.|.+.+++....... .......+++.|.+..|+.... .+.|...++... .........-.
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~---~~~~~~~~~l~ 246 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---DIYSLVTENIQ 246 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC---SCEEEECSSCS
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC---ccEEEEECCCC
Confidence 55554 445678899999876643222 2234678999997776666553 478888888632 22222222335
Q ss_pred ceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEec--CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCcee
Q psy17243 154 EITCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVG--HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEE 230 (392)
Q Consensus 154 ~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 230 (392)
....|++++++..|+.+. ..+.|..+|+........... .-.....+++. .+.++++-...+.|..+|..+++.+
T Consensus 247 ~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCce
Confidence 678999998877777665 467899999865433333322 12344566664 5667777777889999998888877
Q ss_pred eeecccccceeEEE
Q psy17243 231 HFLAGHLGCVTCVK 244 (392)
Q Consensus 231 ~~~~~~~~~v~~~~ 244 (392)
..+.........+.
T Consensus 325 ~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 325 NLLAENLLSPEDMV 338 (400)
T ss_dssp EEEECSCSCEEEEE
T ss_pred EEEecCCCCCceEE
Confidence 76654333344443
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.88 E-value=8.1e-06 Score=78.86 Aligned_cols=246 Identities=11% Similarity=0.084 Sum_probs=155.7
Q ss_pred ccCCeEEEEECCCccceeeecc-------CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecc-------cc
Q psy17243 3 GMDCLVNVWQMNSHELQSTMEG-------HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKS-------HQ 68 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------~~ 68 (392)
+.++-+.+||..+++....... ....|.++...++|.+ ..|+.+ -|.+||..+++....... ..
T Consensus 232 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~ 309 (795)
T 4a2l_A 232 TEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRL-WIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQ 309 (795)
T ss_dssp EBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCE-EEEESS-CEEEEETTTTEEEEECCCTTSTTSCSS
T ss_pred ECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCE-EEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCC
Confidence 3344578888776544322211 2356999999888874 445555 488999877654433211 23
Q ss_pred cceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeee---------cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCC
Q psy17243 69 STILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYS---------ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQ 139 (392)
Q Consensus 69 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 139 (392)
..|.++...++|. |..|+.++-|..++..+...... ....+.++...++++ |.+|+.++-|..|+..+.
T Consensus 310 ~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~ 387 (795)
T 4a2l_A 310 RSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQ 387 (795)
T ss_dssp SCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTC
T ss_pred CcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCC
Confidence 5699999988876 55677777788898766543211 122467777777765 666777878999987643
Q ss_pred CCCCcceee-----eccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe----cCCCceeEEEEecCCCcEE
Q psy17243 140 THKDDERFT-----VSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV----GHTDHVSCVAVAVTNKSLV 210 (392)
Q Consensus 140 ~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l 210 (392)
......... .-....|.++...++++.|..|+.++-|..||..+++...... .....|.++... .++.+.
T Consensus 388 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d-~~g~lw 466 (795)
T 4a2l_A 388 RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPD-GEGNLW 466 (795)
T ss_dssp CEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEEC-SSSCEE
T ss_pred cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEEC-CCCCEE
Confidence 221110000 0123578899888888767778877789999988776443221 124568888877 455555
Q ss_pred EEecCCCeEEEEECCCCceeeeecc------cccceeEEEEcCCCeEEEEc
Q psy17243 211 VSGSKDSNLIVWDMETGGEEHFLAG------HLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 211 ~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~~dg~~~~~~ 255 (392)
+.. . +-|.+||..+++....... ....|.++...++|.+.+..
T Consensus 467 igt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 467 LGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp EEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred EEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 544 4 4588999887654332211 23578899999988877654
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.85 E-value=2.5e-07 Score=74.65 Aligned_cols=164 Identities=10% Similarity=-0.040 Sum_probs=112.5
Q ss_pred CccCCeEEEEECCCccceeeeccCCcCeeE--EEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecC
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGHLNTVSC--VAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSD 79 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~--~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 79 (392)
.+.+|.|+++|+++++.+..+ - ...... +++..+ ++.+..-.++.+.+||.++.+.+.++..... -..++ ++
T Consensus 71 tG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-GwGLt--~D 144 (268)
T 3nok_A 71 TGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-GWGLC--YW 144 (268)
T ss_dssp ETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEECSSC-CCCEE--EE
T ss_pred cCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEeCCCc-eeEEe--cC
Confidence 466788999999999999887 2 233444 444433 3333445689999999999999999885322 23333 57
Q ss_pred CCEEEEEeCCCeEEEEEcCCceeeeeccc--------ceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceee---
Q psy17243 80 SRRVVTSDKAGVIAVWVADNAQLLYSALG--------PSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFT--- 148 (392)
Q Consensus 80 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--- 148 (392)
++.|+.+..++.|.++|..+.+.+....- ..+.+.+. ++...+....+..|.+.|..+++....+...
T Consensus 145 g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~ 223 (268)
T 3nok_A 145 NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALT 223 (268)
T ss_dssp TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHH
T ss_pred CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCc
Confidence 88888888899999999999988765543 22445555 6665555556889999999876544333321
Q ss_pred -------eccccceEEEEEEcCCCEEEEeeC
Q psy17243 149 -------VSHSEEITCFTVTWDSQYLITGSR 172 (392)
Q Consensus 149 -------~~~~~~v~~~~~~~~~~~l~~~~~ 172 (392)
.....-.+.|+++|+++.|++.+.
T Consensus 224 ~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 224 RAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp HHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred ccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 012246789999998766665553
No 260
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.83 E-value=7.9e-06 Score=66.33 Aligned_cols=191 Identities=10% Similarity=0.116 Sum_probs=132.0
Q ss_pred EecccccceEEEEEecCCCEEE-EEeCCCeEEEEEcCCceeeeecc----cceeEEEEeCCCCEEEEecCCCcEEEEeCC
Q psy17243 63 TFKSHQSTILAVAVLSDSRRVV-TSDKAGVIAVWVADNAQLLYSAL----GPSKCLTVTHNMKYIVSGDGDNSLRIWPTS 137 (392)
Q Consensus 63 ~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~ 137 (392)
.+.+-...+..++|.|++..|+ +...++.|...|.. ++.+.... .....+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4455556799999999876555 57778899999998 77766553 356788888888877776677889999886
Q ss_pred CCCCCCcce-e-----eeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcC---CCeEEEEEe-------cCCCceeEEE
Q psy17243 138 PQTHKDDER-F-----TVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVV---GGKLAQVLV-------GHTDHVSCVA 201 (392)
Q Consensus 138 ~~~~~~~~~-~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~-------~~~~~v~~~~ 201 (392)
......... . ....+.....++++|.++.|+++.+.....+|.+. ....+..+. .+...+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 543211111 1 01234557899999999888888776655666554 111222221 1234578999
Q ss_pred EecCCCcEEEEecCCCeEEEEECCCCceeeeecccc---------cceeEEEEcCCCeEEEEc
Q psy17243 202 VAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHL---------GCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 202 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~~~dg~~~~~~ 255 (392)
++|..+.+++.....+.|.++|.. ++.+..+.-.. ..--.|+|.++|++.++.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 999999999999999999999976 55555443221 255789999999987774
No 261
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.82 E-value=2.2e-05 Score=75.84 Aligned_cols=244 Identities=15% Similarity=0.123 Sum_probs=153.6
Q ss_pred CccCCeEEEEECCCccceeeec------cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecc--------c
Q psy17243 2 GGMDCLVNVWQMNSHELQSTME------GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKS--------H 67 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--------~ 67 (392)
|+.++-|..|+..+.+...... -....|.++...+++. |..|+.++-|..|+..+++....... .
T Consensus 326 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~ 404 (795)
T 4a2l_A 326 GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIG 404 (795)
T ss_dssp EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCS
T ss_pred EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCC
Confidence 3445667777765543221111 0245699999988876 56677777799999887654432211 2
Q ss_pred ccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeec-------ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCC
Q psy17243 68 QSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSA-------LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQT 140 (392)
Q Consensus 68 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 140 (392)
...|.++...++++.|.+|+.++-|..+|..+++...-. ...+.++...+++...+ |+. +.+.+||..+..
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWL-GTL-SALVRFNPEQRS 482 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEE-EES-SCEEEEETTTTE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEE-Eec-CceeEEeCCCCe
Confidence 357899999888876777888778999999887654321 23567788777776544 444 458889876432
Q ss_pred CCCccee---eeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe-------cCCCceeEEEEecCCCcEE
Q psy17243 141 HKDDERF---TVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV-------GHTDHVSCVAVAVTNKSLV 210 (392)
Q Consensus 141 ~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l 210 (392)
....... .......|.++...+++++.+ |+. +-|..||..+++. .+. .....|.++... .++.+.
T Consensus 483 ~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d-~~g~lW 557 (795)
T 4a2l_A 483 FTTIEKEKDGTPVVSKQITTLFRDSHKRLWI-GGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEA-SNGIIW 557 (795)
T ss_dssp EEECCBCTTCCBCCCCCEEEEEECTTCCEEE-EES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEEC-TTSCEE
T ss_pred EEEccccccccccCCceEEEEEECCCCCEEE-EeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEEC-CCCCEE
Confidence 2111100 011235688888888886554 444 4589999887765 332 123468888877 556655
Q ss_pred EEecCCCeEEEEECCCCceeeeec--c-cccceeEEEEcCCCeEEEEc
Q psy17243 211 VSGSKDSNLIVWDMETGGEEHFLA--G-HLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 211 ~~~~~dg~i~iwd~~~~~~~~~~~--~-~~~~v~~~~~~~dg~~~~~~ 255 (392)
++. .+ -|..||..+++....-. + ....|.++...++|.+-+..
T Consensus 558 igT-~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 558 VGT-RE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp EEE-SS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE
T ss_pred EEe-CC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc
Confidence 543 34 58889987665432111 1 13468889999999887775
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.80 E-value=6.9e-06 Score=65.70 Aligned_cols=187 Identities=10% Similarity=0.071 Sum_probs=123.2
Q ss_pred ceeEEeccccc--ceEEEEEecCCCEEEEEeCC--CeEEEEEcCCceeeeeccc--ceeEEEEeCCCCEEE-EecCCCcE
Q psy17243 59 SVVSTFKSHQS--TILAVAVLSDSRRVVTSDKA--GVIAVWVADNAQLLYSALG--PSKCLTVTHNMKYIV-SGDGDNSL 131 (392)
Q Consensus 59 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~l~-~~~~d~~i 131 (392)
+.+.++. |+. ....+.|++ +..+.+.+.+ ..|+.+|+.+++.+..... ......+...++.|+ ..-.++.+
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEE
Confidence 3455664 543 467899986 5555566665 4899999999999876643 222222223344444 44568999
Q ss_pred EEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCC-----CceeEEEEecCC
Q psy17243 132 RIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHT-----DHVSCVAVAVTN 206 (392)
Q Consensus 132 ~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~ 206 (392)
.+||..+.+....... . .. ...+.+++..|+++..++.|.++|..+.+.+..+.-.. ..++.+.+. +
T Consensus 88 ~v~D~~tl~~~~ti~~--~--~~--Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~ 159 (243)
T 3mbr_X 88 FVYDLATLTPRARFRY--P--GE--GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--N 159 (243)
T ss_dssp EEEETTTTEEEEEEEC--S--SC--CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--T
T ss_pred EEEECCcCcEEEEEeC--C--CC--ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--C
Confidence 9999975443333222 1 11 23344677777777778999999999998887775422 245566765 5
Q ss_pred CcEEEEecCCCeEEEEECCCCceeeeeccc-------------ccceeEEEEcCCCe-EEEEc
Q psy17243 207 KSLVVSGSKDSNLIVWDMETGGEEHFLAGH-------------LGCVTCVKLAGDGT-VAMSD 255 (392)
Q Consensus 207 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~~~~~~dg~-~~~~~ 255 (392)
+.+++..-.+..|.+.|..+++.+..+... ....+.++++|++. +++++
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 666666667889999999999988776522 13568999999654 55554
No 263
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.80 E-value=1.9e-05 Score=67.00 Aligned_cols=226 Identities=12% Similarity=0.043 Sum_probs=141.1
Q ss_pred CCeEEEEECCCccc-eeeeccCCcCeeEEEecCC-CCeEEEEeCCCeEEEEeCCCCcee-EEecccccceEEEEEecCCC
Q psy17243 5 DCLVNVWQMNSHEL-QSTMEGHLNTVSCVAISPN-SIFAVSGSEDNTAKVWGLTLGSVV-STFKSHQSTILAVAVLSDSR 81 (392)
Q Consensus 5 dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~ 81 (392)
...|+..++..... ...+........+++|.+. +.++++-...+.|..++++.+... ..+...-.....+++.+.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 45788888876531 1112122345678999985 445555556788999998766322 12222223466788887555
Q ss_pred EEE-EEeCCCeEEEEEcCCcee--ee-ecccceeEEEEeCCCCEEEEecC--CCcEEEEeCCCCCCCCcceeeeccccce
Q psy17243 82 RVV-TSDKAGVIAVWVADNAQL--LY-SALGPSKCLTVTHNMKYIVSGDG--DNSLRIWPTSPQTHKDDERFTVSHSEEI 155 (392)
Q Consensus 82 ~l~-~~~~d~~i~iwd~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~v 155 (392)
.|+ +-...+.|.+++++.... +. ........+++.|.+..|+.... .+.|..+++.... ........-...
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~l~~P 168 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINSEIYWP 168 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEECCCCCc
Confidence 554 445668899999876432 21 22235678999987666666653 5788888876321 111211223456
Q ss_pred EEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeec
Q psy17243 156 TCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLA 234 (392)
Q Consensus 156 ~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 234 (392)
..+++++++..|+.+. ..+.|..+|+..................+++. .+.++++-...+.|..++..+++....+.
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 8999999776666654 46789999986433322233234456677775 45677777778899999998887766554
Q ss_pred c
Q psy17243 235 G 235 (392)
Q Consensus 235 ~ 235 (392)
.
T Consensus 247 ~ 247 (318)
T 3sov_A 247 S 247 (318)
T ss_dssp C
T ss_pred C
Confidence 3
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.73 E-value=8.7e-05 Score=63.93 Aligned_cols=223 Identities=9% Similarity=0.042 Sum_probs=139.3
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEe-CCCeEEEEEcCCceeee
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSD-KAGVIAVWVADNAQLLY 104 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~ 104 (392)
....+|.+..++. +|+.+. ...|+..+++.......+. .......++|.+....|+.+. ..+.|..+++.......
T Consensus 33 ~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp TTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence 3445666666643 444443 3458888887665544444 344578999998776666554 56889999988764322
Q ss_pred ec---ccceeEEEEeCCCCEE-EEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEee-CC-CcEEE
Q psy17243 105 SA---LGPSKCLTVTHNMKYI-VSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGS-RD-MSLKV 178 (392)
Q Consensus 105 ~~---~~~~~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~i 178 (392)
.. ......+++.+.+..| ++-...+.|.++++.... ..............+++.|.+..|+... .. +.|..
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc---eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 21 2345688998755544 455557889999986322 1222223335678999999766655554 34 77888
Q ss_pred EEcCCCeEEEEE-ecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 179 WQVVGGKLAQVL-VGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 179 ~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+++.... ...+ ...-...+.++++|.++.+.++-...+.|..+|+........+.........+++ .++.+.+++.
T Consensus 187 ~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~ 263 (349)
T 3v64_C 187 SSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDW 263 (349)
T ss_dssp EETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEET
T ss_pred EeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecC
Confidence 8876433 2333 2223456899999777777787777889999998754333333333345567777 3455555554
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.73 E-value=5.4e-05 Score=61.43 Aligned_cols=200 Identities=11% Similarity=0.106 Sum_probs=130.1
Q ss_pred eeccCCcCeeEEEecCCCCeE-EEEeCCCeEEEEeCCCCceeEEecc-cccceEEEEEecCCCEEEEEeCCCeEEEEEcC
Q psy17243 21 TMEGHLNTVSCVAISPNSIFA-VSGSEDNTAKVWGLTLGSVVSTFKS-HQSTILAVAVLSDSRRVVTSDKAGVIAVWVAD 98 (392)
Q Consensus 21 ~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 98 (392)
.+.+-...+..++|+|++..| ++...++.|...|.. ++.+..+.. .......+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 344555679999999976644 456778899999988 888877742 23567888998888766666667889998876
Q ss_pred Ccee---eeec---------ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeee-------ccccceEEEE
Q psy17243 99 NAQL---LYSA---------LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTV-------SHSEEITCFT 159 (392)
Q Consensus 99 ~~~~---~~~~---------~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-------~~~~~v~~~~ 159 (392)
.... +... +.....++++|.++.|+++.......+|.+............. .....+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5432 1111 1123689999999888888776666666554111111111110 1234568899
Q ss_pred EEcCC-CEEEEeeCCCcEEEEEcCCCeEEEEEecCC---------CceeEEEEecCCCcEEEEecCCCeEEEEEC
Q psy17243 160 VTWDS-QYLITGSRDMSLKVWQVVGGKLAQVLVGHT---------DHVSCVAVAVTNKSLVVSGSKDSNLIVWDM 224 (392)
Q Consensus 160 ~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 224 (392)
++|.. .+++.......+.++|.. ++.+..+.-.. .....|+|. +++++.++ ++-+.++.+.-
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d-~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMD-ASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEEC-TTCCEEEE-ETTTEEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEEC-CCCCEEEE-cCCceEEEEEe
Confidence 99974 455566667889999965 55555543221 256789999 56665555 55666666653
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.72 E-value=2.2e-06 Score=80.74 Aligned_cols=186 Identities=11% Similarity=0.115 Sum_probs=126.3
Q ss_pred cCCeEEEEECCCccceeeeccCC-------------------------------cCeeEEEecCCCCeEEEEeCCC----
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHL-------------------------------NTVSCVAISPNSIFAVSGSEDN---- 48 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~-------------------------------~~v~~~~~~~~~~~l~~~~~dg---- 48 (392)
.+|.|..+|..+++++..+.... .....+++.|+..+++.++.++
T Consensus 176 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~ 255 (668)
T 1kv9_A 176 VRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWN 255 (668)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccc
Confidence 36899999999999988765210 1112468888878888887766
Q ss_pred ---------------eEEEEeCCCCceeEEecc--cc-------cceEEEEEecCCC---EEEEEeCCCeEEEEEcCCce
Q psy17243 49 ---------------TAKVWGLTLGSVVSTFKS--HQ-------STILAVAVLSDSR---RVVTSDKAGVIAVWVADNAQ 101 (392)
Q Consensus 49 ---------------~v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~ 101 (392)
.|..+|.++|+.+-.++. |. .+.....+..+++ .++.++.+|.++++|..+++
T Consensus 256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 499999999999877764 22 2333333344665 68889999999999999998
Q ss_pred eeeeccc---------------ce------------------------eEEEEeCCCCEEEEec----------------
Q psy17243 102 LLYSALG---------------PS------------------------KCLTVTHNMKYIVSGD---------------- 126 (392)
Q Consensus 102 ~~~~~~~---------------~~------------------------~~~~~~~~~~~l~~~~---------------- 126 (392)
.+..... ++ ..++++|+...+++..
T Consensus 336 ~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~ 415 (668)
T 1kv9_A 336 LISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVT 415 (668)
T ss_dssp EEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCC
T ss_pred EeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccc
Confidence 8732110 00 1256777766665421
Q ss_pred --------------------CCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeE
Q psy17243 127 --------------------GDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKL 186 (392)
Q Consensus 127 --------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 186 (392)
.+|.|..||+.+++..-.. ....+.....+...+.++++++.|+.++.||.++++.
T Consensus 416 ~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~----~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 416 RKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKV----PYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEE----EESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEc----cCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 2377888998755432211 1222333334455688999999999999999999999
Q ss_pred EEEEecC
Q psy17243 187 AQVLVGH 193 (392)
Q Consensus 187 ~~~~~~~ 193 (392)
+..+...
T Consensus 492 l~~~~~~ 498 (668)
T 1kv9_A 492 LWQFEAQ 498 (668)
T ss_dssp EEEEECS
T ss_pred heEecCC
Confidence 9888654
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.72 E-value=9.1e-07 Score=83.41 Aligned_cols=250 Identities=11% Similarity=-0.003 Sum_probs=140.9
Q ss_pred eEEEEECCCcccee--eecc-CCcCeeEEEecCCCCeEEEEeC-CCeEEEEeCCCCceeEEecccccc-eEEEEEecCCC
Q psy17243 7 LVNVWQMNSHELQS--TMEG-HLNTVSCVAISPNSIFAVSGSE-DNTAKVWGLTLGSVVSTFKSHQST-ILAVAVLSDSR 81 (392)
Q Consensus 7 ~i~vwd~~~~~~~~--~~~~-h~~~v~~~~~~~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~ 81 (392)
.+.+||..+++... .+.. +.....++++..++++++.|+. +..+.+||..+.+-...-..+... -.+++..++++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 57888887765332 2221 3333446788889999999884 468999998877544322212221 23456667899
Q ss_pred EEEEEe-CC-----CeEEEEEcCCceeeeec-------ccceeEEEEeCCCCEEEEecCCC---------cEEEEeCCCC
Q psy17243 82 RVVTSD-KA-----GVIAVWVADNAQLLYSA-------LGPSKCLTVTHNMKYIVSGDGDN---------SLRIWPTSPQ 139 (392)
Q Consensus 82 ~l~~~~-~d-----~~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~d~---------~i~~~d~~~~ 139 (392)
.++.|+ .+ ..+.+||..+.+-.... ........+..++..++.++.+| .+..||....
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~ 379 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 379 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred EEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCc
Confidence 999888 34 56999999887543321 00101112224455555554443 5677887644
Q ss_pred CCCCcceeeec------cccceEEEEEEc-CCCEEEEeeCCC-----------cEEEEEcCCCeEEEEE--ecCCCce-e
Q psy17243 140 THKDDERFTVS------HSEEITCFTVTW-DSQYLITGSRDM-----------SLKVWQVVGGKLAQVL--VGHTDHV-S 198 (392)
Q Consensus 140 ~~~~~~~~~~~------~~~~v~~~~~~~-~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~--~~~~~~v-~ 198 (392)
........... ....-.++.|.. ++++++.|+.++ .|.+||..+.+..... ....... .
T Consensus 380 ~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~ 459 (656)
T 1k3i_A 380 GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFH 459 (656)
T ss_dssp CEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSC
T ss_pred ceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccC
Confidence 32211111100 011223444443 677788877532 6888888776654432 2222232 2
Q ss_pred EEEEecCCCcEEEEecCC-----------CeEEEEECCCCceee--eecccccceeEEEEcCCCeEEEEcCC
Q psy17243 199 CVAVAVTNKSLVVSGSKD-----------SNLIVWDMETGGEEH--FLAGHLGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 199 ~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~dg~~~~~~~~ 257 (392)
+.+.. +++.+++.|+.+ ..+.+||..+.+-.. .+...........+.+||++++.+..
T Consensus 460 ~~~~l-~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 460 TSVVL-PDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEEC-TTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CeEEC-CCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 33444 578888888754 468999987755322 12111122234556799999999874
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.72 E-value=4.2e-06 Score=77.22 Aligned_cols=182 Identities=10% Similarity=0.044 Sum_probs=113.0
Q ss_pred CCeEEEEEC-CCccceeeeccCCc-Ce----------eEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccc--c-
Q psy17243 5 DCLVNVWQM-NSHELQSTMEGHLN-TV----------SCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQ--S- 69 (392)
Q Consensus 5 dg~i~vwd~-~~~~~~~~~~~h~~-~v----------~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~--~- 69 (392)
++.|.-+|. .+++.+.++..... .+ ..+.. .+..++.++.|+.|..+|.++|+.+-+..... .
T Consensus 72 ~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~ 149 (571)
T 2ad6_A 72 PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVG 149 (571)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT
T ss_pred CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCcc
Confidence 688999999 89998877653221 00 11222 34567888889999999999999887654321 0
Q ss_pred -ceEE-EEEecCCCEEEEEeC------CCeEEEEEcCCceeeeeccc--ce-----------------------------
Q psy17243 70 -TILA-VAVLSDSRRVVTSDK------AGVIAVWVADNAQLLYSALG--PS----------------------------- 110 (392)
Q Consensus 70 -~v~~-~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~--~~----------------------------- 110 (392)
.+.+ .... ++ .+++++. ++.|..+|..+++.+..... +.
T Consensus 150 ~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~ 227 (571)
T 2ad6_A 150 STLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGD 227 (571)
T ss_dssp CBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTT
T ss_pred ceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCccc
Confidence 1211 1111 33 5666654 78999999999988765432 11
Q ss_pred ----------eEEEEeCCCCEEEEecCC----------------CcEEEEeCCCCCCCCcceeee-------ccccceEE
Q psy17243 111 ----------KCLTVTHNMKYIVSGDGD----------------NSLRIWPTSPQTHKDDERFTV-------SHSEEITC 157 (392)
Q Consensus 111 ----------~~~~~~~~~~~l~~~~~d----------------~~i~~~d~~~~~~~~~~~~~~-------~~~~~v~~ 157 (392)
..+++.++...++.+..+ +.|..+|..+++..-...... ....++ -
T Consensus 228 ~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l 306 (571)
T 2ad6_A 228 AWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-L 306 (571)
T ss_dssp GGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-E
T ss_pred ceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-E
Confidence 124566766777776642 258888887654332111110 011222 2
Q ss_pred EEEEcCCC---EEEEeeCCCcEEEEEcCCCeEEEEEe
Q psy17243 158 FTVTWDSQ---YLITGSRDMSLKVWQVVGGKLAQVLV 191 (392)
Q Consensus 158 ~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~ 191 (392)
+....+++ .++.++.+|.++++|..+++.+..+.
T Consensus 307 ~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 307 TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 23334674 57788889999999999999887654
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.71 E-value=0.0001 Score=64.44 Aligned_cols=221 Identities=9% Similarity=0.023 Sum_probs=137.4
Q ss_pred eeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEe-CCCeEEEEEcCCceeeeec-
Q psy17243 29 VSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSD-KAGVIAVWVADNAQLLYSA- 106 (392)
Q Consensus 29 v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~- 106 (392)
-.|.+..+. .+|+.+. ...|+..++........+. .......++|.+.+..|+.+. ..+.|..+++.........
T Consensus 79 ~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 79 RSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp SCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CeECCcccc-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 345554453 3444443 4568888887665544444 344578999998766666554 5678999998876432222
Q ss_pred --ccceeEEEEeCCCCEE-EEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC-C-CcEEEEEc
Q psy17243 107 --LGPSKCLTVTHNMKYI-VSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR-D-MSLKVWQV 181 (392)
Q Consensus 107 --~~~~~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~i~d~ 181 (392)
......+++.+.+..| ++-...+.|.++++.... ..............+++.|.+..|+.... . +.|..+++
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~---~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc---eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 2244678888755554 444557788888876322 12222233356789999987766665543 3 67888887
Q ss_pred CCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 182 VGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 182 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
............-...+.++++|.++.+.++-...+.|..+|+........+.........+++ .++.+.+++.
T Consensus 233 dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~ 306 (386)
T 3v65_B 233 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDW 306 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEET
T ss_pred CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeC
Confidence 6443333333333457899999777888888778889999998754333333333345567777 3455555543
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.64 E-value=4.5e-05 Score=73.51 Aligned_cols=243 Identities=9% Similarity=0.056 Sum_probs=147.0
Q ss_pred eEEEEECCCccceeeecc-------CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec--------------
Q psy17243 7 LVNVWQMNSHELQSTMEG-------HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK-------------- 65 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-------------- 65 (392)
-+.+||..+++....... ....|.++...+++. |..|+..+-|.++|..+++......
T Consensus 231 Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 309 (781)
T 3v9f_A 231 GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYS 309 (781)
T ss_dssp EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTS
T ss_pred cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCC
Confidence 577788766543322111 245699999888876 5556664568889987665322111
Q ss_pred ccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeee------------cccceeEEEEeCCCCEEEEecCCCcEEE
Q psy17243 66 SHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYS------------ALGPSKCLTVTHNMKYIVSGDGDNSLRI 133 (392)
Q Consensus 66 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~d~~i~~ 133 (392)
.....|.++...+++. |..|+.++-|..++..+...... ....+.++...+++. |.+|+.++-|..
T Consensus 310 l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~ 387 (781)
T 3v9f_A 310 LSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINV 387 (781)
T ss_dssp BSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEE
T ss_pred CCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEE
Confidence 1245689999888775 56677677788888876543221 113466777777665 566776677888
Q ss_pred EeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe--cCCCceeEEEEecCCCcEEE
Q psy17243 134 WPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV--GHTDHVSCVAVAVTNKSLVV 211 (392)
Q Consensus 134 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~ 211 (392)
|+..+................|.++...++++ |..|+.++-|..+|..+++...... .....|.++... .++.+.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d-~~g~lwi 465 (781)
T 3v9f_A 388 FENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYED-KNKKIWI 465 (781)
T ss_dssp EETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEEC-TTSEEEE
T ss_pred EECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEEC-CCCCEEE
Confidence 88753211111000012345688888776665 5557766779999987775433221 124568888776 4555444
Q ss_pred EecCCCeEEEEECCCCceeeeeccc-----ccceeEEEEcCCCeEEEEcC
Q psy17243 212 SGSKDSNLIVWDMETGGEEHFLAGH-----LGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 212 ~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~dg~~~~~~~ 256 (392)
|+. +-|..+|..+++........ ...|.++...++|.+.+...
T Consensus 466 -gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 513 (781)
T 3v9f_A 466 -GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF 513 (781)
T ss_dssp -EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES
T ss_pred -EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc
Confidence 444 56899998876644322211 35788999998888776653
No 271
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.62 E-value=5.9e-06 Score=79.07 Aligned_cols=193 Identities=13% Similarity=0.058 Sum_probs=113.5
Q ss_pred CeeEEEec-CCCCeEEEEeC-C----CeEEEEeCCCC-ceeEEecccccceEEEEEecCCCEEEEEeCC-----CeEEEE
Q psy17243 28 TVSCVAIS-PNSIFAVSGSE-D----NTAKVWGLTLG-SVVSTFKSHQSTILAVAVLSDSRRVVTSDKA-----GVIAVW 95 (392)
Q Consensus 28 ~v~~~~~~-~~~~~l~~~~~-d----g~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw 95 (392)
.+...+|| |||++||.+.. + ..|+++|+.++ +.+... -......+.|+||++.|+....+ ..|+.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 57889999 99998875432 2 35999999998 632210 11123468899999988877654 368888
Q ss_pred EcCCce----eeeecc--cceeEEEEeCCCCEEEEecC---CCcEEEEeCCCCCCCCc-ceeeeccccceEEEEEEcCCC
Q psy17243 96 VADNAQ----LLYSAL--GPSKCLTVTHNMKYIVSGDG---DNSLRIWPTSPQTHKDD-ERFTVSHSEEITCFTVTWDSQ 165 (392)
Q Consensus 96 d~~~~~----~~~~~~--~~~~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 165 (392)
++.+++ .+.... .....+.++|++++|+.... ...|.++|+........ ............++.|+..+.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE
Confidence 887763 222212 23456789999999887653 45688888875421110 112222334445555544333
Q ss_pred EEEEeeCC----CcEEEEEcCCCeEEEE-EecCCC--ceeEEEEecCCCcEEEEecCCCe--EEEEEC
Q psy17243 166 YLITGSRD----MSLKVWQVVGGKLAQV-LVGHTD--HVSCVAVAVTNKSLVVSGSKDSN--LIVWDM 224 (392)
Q Consensus 166 ~l~~~~~d----g~i~i~d~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~--i~iwd~ 224 (392)
+++....+ ..|..+|+.++..... +..+.. .+..+.+ .++.++++...++. |.++++
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEec
Confidence 44444333 3677777765222122 233433 3444444 45677777777876 555665
No 272
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.61 E-value=0.00015 Score=69.18 Aligned_cols=223 Identities=14% Similarity=0.037 Sum_probs=137.5
Q ss_pred CeEEEEECCCccceeeeccCCcCeeEEEecCCCC-eEEEEeCCCeEEEEeCCCC----ceeEEecccccceEEEEEecCC
Q psy17243 6 CLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSI-FAVSGSEDNTAKVWGLTLG----SVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
..|+..++...+....+. ....+..|+|.+... ++++-...+.|+.+++... .....+.........|++.+.+
T Consensus 404 ~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 482 (791)
T ss_dssp SSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred cceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC
Confidence 345555655444333333 445678999998544 4455556688988888753 2233333234456789998877
Q ss_pred CEEEEE-eCCCeEEEEEcCCceeeee---cccceeEEEEeCCCCEEEEecC--CCcEEEEeCCCCCCCCcceeeeccccc
Q psy17243 81 RRVVTS-DKAGVIAVWVADNAQLLYS---ALGPSKCLTVTHNMKYIVSGDG--DNSLRIWPTSPQTHKDDERFTVSHSEE 154 (392)
Q Consensus 81 ~~l~~~-~~d~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~ 154 (392)
..|+.+ ...+.|.+.++........ .......|++.|....|+.... .+.|...++... ....+....-..
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~---~~~~lv~~~l~~ 559 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---DIYSLVTENIQW 559 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---CEEEEECSSCSC
T ss_pred CcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC---ceEEEEeCCCCC
Confidence 655555 4568899999886543222 2235678999998766666653 267888888632 222222233356
Q ss_pred eEEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEecC--CCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceee
Q psy17243 155 ITCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVGH--TDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 155 v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 231 (392)
...|++.+.+..|+.+. ....|..+++........+... -.....|++. .+.++++-...+.|...|..+++.+.
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~ 637 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVN 637 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceE
Confidence 78999998777776664 4568999998654433333321 2234456664 45677777778889999988887666
Q ss_pred eec
Q psy17243 232 FLA 234 (392)
Q Consensus 232 ~~~ 234 (392)
.+.
T Consensus 638 ~l~ 640 (791)
T 3m0c_C 638 LLA 640 (791)
T ss_dssp EEE
T ss_pred Eee
Confidence 554
No 273
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.61 E-value=1.8e-05 Score=72.99 Aligned_cols=182 Identities=11% Similarity=0.071 Sum_probs=116.3
Q ss_pred CCeEEEEEC-CCccceeeeccCCcC-----------eeEEEecCCCCe----EEEEeCCCeEEEEeCCCCceeEEecccc
Q psy17243 5 DCLVNVWQM-NSHELQSTMEGHLNT-----------VSCVAISPNSIF----AVSGSEDNTAKVWGLTLGSVVSTFKSHQ 68 (392)
Q Consensus 5 dg~i~vwd~-~~~~~~~~~~~h~~~-----------v~~~~~~~~~~~----l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 68 (392)
++.|.-+|. .+++.+.++...... ...++++|.+.. |+.++.|+.|..+|.++|+.+-+.....
T Consensus 72 ~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~ 151 (599)
T 1w6s_A 72 PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSD 151 (599)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCC
Confidence 688999999 899988777532210 123455443334 7888899999999999999886654322
Q ss_pred c----ceEE-EEEecCCCEEEEEe------CCCeEEEEEcCCceeeeecccc--e-------------------------
Q psy17243 69 S----TILA-VAVLSDSRRVVTSD------KAGVIAVWVADNAQLLYSALGP--S------------------------- 110 (392)
Q Consensus 69 ~----~v~~-~~~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~--~------------------------- 110 (392)
. .+.+ ... .++ .+++++ .++.|+.+|.++++.+...... .
T Consensus 152 ~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~t 229 (599)
T 1w6s_A 152 IKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGT 229 (599)
T ss_dssp GGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHT
T ss_pred CCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccccccccccc
Confidence 0 1221 111 134 555554 3799999999999887654321 1
Q ss_pred --------------eEEEEeCCCCEEEEecCCC----------------cEEEEeCCCCCCCCcceeeeccc--------
Q psy17243 111 --------------KCLTVTHNMKYIVSGDGDN----------------SLRIWPTSPQTHKDDERFTVSHS-------- 152 (392)
Q Consensus 111 --------------~~~~~~~~~~~l~~~~~d~----------------~i~~~d~~~~~~~~~~~~~~~~~-------- 152 (392)
..+++.+....++.+..++ .|..+|.++++..-. +...+.
T Consensus 230 w~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~--~q~~~~d~wd~d~~ 307 (599)
T 1w6s_A 230 WEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFG--YQKTPHDEWDYAGV 307 (599)
T ss_dssp SSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEE--EESSTTCSSCCCCC
T ss_pred CCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeE--eecCCCccccccCC
Confidence 1345667777888877653 788888876544321 111111
Q ss_pred -cceEEEEEE-cCC---CEEEEeeCCCcEEEEEcCCCeEEEEEe
Q psy17243 153 -EEITCFTVT-WDS---QYLITGSRDMSLKVWQVVGGKLAQVLV 191 (392)
Q Consensus 153 -~~v~~~~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~ 191 (392)
.++. +... .++ ..++.++.+|.++++|.++++.+....
T Consensus 308 ~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 308 NVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp CCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 1221 2222 456 467778899999999999999886654
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=5.2e-05 Score=67.34 Aligned_cols=224 Identities=8% Similarity=0.041 Sum_probs=133.1
Q ss_pred CeeEEEecC-CCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCC-C----eEEEEEcCCce
Q psy17243 28 TVSCVAISP-NSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKA-G----VIAVWVADNAQ 101 (392)
Q Consensus 28 ~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~i~iwd~~~~~ 101 (392)
....|+++| ++..|+.+...+.|+.+|++.+....... .......++|+++++.|+++... + .+...+.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457899998 45566666555889999988766544433 45567899999999977766642 1 23334432211
Q ss_pred e---eeecccceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEe-eCCCcE
Q psy17243 102 L---LYSALGPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITG-SRDMSL 176 (392)
Q Consensus 102 ~---~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i 176 (392)
. ..........++++| ++.++++-..++.|..++....... .............++|+|++++|+.. ...+.|
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 1 111123456788999 6666666667889999998633211 11111222456789999999955554 457889
Q ss_pred EEEEcCC--CeE--EEEEecC---------------CCcee-EEEEec-------CCCcEEEEecCCCeEEEEECCCCce
Q psy17243 177 KVWQVVG--GKL--AQVLVGH---------------TDHVS-CVAVAV-------TNKSLVVSGSKDSNLIVWDMETGGE 229 (392)
Q Consensus 177 ~i~d~~~--~~~--~~~~~~~---------------~~~v~-~~~~~~-------~~~~~l~~~~~dg~i~iwd~~~~~~ 229 (392)
..++... ++. ...+.+. -.... .++..+ .++.++++-..++.|+.++ .+++.
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence 9987653 221 1222211 01122 344431 2355666666677888888 34543
Q ss_pred eeeeccc------------------ccceeEEEEcC-CCeEEEEcC
Q psy17243 230 EHFLAGH------------------LGCVTCVKLAG-DGTVAMSDL 256 (392)
Q Consensus 230 ~~~~~~~------------------~~~v~~~~~~~-dg~~~~~~~ 256 (392)
.. +.+. -..-..+++.+ +|.+++.+.
T Consensus 374 ~~-~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 418 (430)
T 3tc9_A 374 TT-FAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR 418 (430)
T ss_dssp EE-EEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred EE-EEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC
Confidence 32 2211 11467899998 578877764
No 275
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.60 E-value=6.9e-05 Score=63.18 Aligned_cols=193 Identities=12% Similarity=0.186 Sum_probs=123.8
Q ss_pred CCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecC----CC---EEEEEeC---CCeEEEEEcC--Cceeeee
Q psy17243 38 SIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSD----SR---RVVTSDK---AGVIAVWVAD--NAQLLYS 105 (392)
Q Consensus 38 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---d~~i~iwd~~--~~~~~~~ 105 (392)
..+++.....+-+.+||+ +|+.++.+.. +.++.+..-|+ ++ .+++... ++.|.+|++. ++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 345666667789999999 8999988863 56777776663 22 2333333 5789999773 333 332
Q ss_pred cc----------cceeEEEE--eCC-CC-EEEEecCCCcEEEEeCCCCC---CCCcceeeeccccceEEEEEEcCCCEEE
Q psy17243 106 AL----------GPSKCLTV--THN-MK-YIVSGDGDNSLRIWPTSPQT---HKDDERFTVSHSEEITCFTVTWDSQYLI 168 (392)
Q Consensus 106 ~~----------~~~~~~~~--~~~-~~-~l~~~~~d~~i~~~d~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 168 (392)
.. .....+++ ++. +. ++++...+|.+..|++.... ..............+..+...+....|+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEE
Confidence 21 23345666 664 43 68888889999999884321 1112222234457888999998888999
Q ss_pred EeeCCCcEEEEEcC-----CCeEEEEEe-cC-CCceeEEEEec--CCCcEEEEec-CCCeEEEEECC-CCceeeeec
Q psy17243 169 TGSRDMSLKVWQVV-----GGKLAQVLV-GH-TDHVSCVAVAV--TNKSLVVSGS-KDSNLIVWDME-TGGEEHFLA 234 (392)
Q Consensus 169 ~~~~dg~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~~~--~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~ 234 (392)
.+-++..|..|+.+ +++.+..+. ++ ...+..|++-+ ....+|++++ .+.++.+||.. +.+.+..+.
T Consensus 196 v~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 196 IAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 99999778888855 345555442 22 24678888742 2222455444 67899999996 566666554
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.59 E-value=0.00039 Score=67.03 Aligned_cols=243 Identities=8% Similarity=0.014 Sum_probs=149.0
Q ss_pred CccCCeEEEEECCCccceeeec---------cCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEe---ccccc
Q psy17243 2 GGMDCLVNVWQMNSHELQSTME---------GHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTF---KSHQS 69 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~---~~~~~ 69 (392)
|+.++-|..++..+........ -....|.++...+++. |..|+.++-|..|+..+++..... .....
T Consensus 329 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 407 (781)
T 3v9f_A 329 GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSN 407 (781)
T ss_dssp EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCS
T ss_pred EecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCc
Confidence 3445667777766543322110 0235689999888776 556666666889997654332111 12345
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeec-----ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc
Q psy17243 70 TILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSA-----LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD 144 (392)
Q Consensus 70 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 144 (392)
.|.++...+++. |.+|+.++-+..+|..+++..... ...+.++...+++. |.+|+. +.|..||..+....
T Consensus 408 ~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~-- 482 (781)
T 3v9f_A 408 SVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVI-- 482 (781)
T ss_dssp BEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCC--
T ss_pred ceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEE--
Confidence 788998877775 455777677999998877654322 23567777777765 555555 56888987643221
Q ss_pred ceeeec-----cccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEec----CCCceeEEEEecCCCcEEEEecC
Q psy17243 145 ERFTVS-----HSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVG----HTDHVSCVAVAVTNKSLVVSGSK 215 (392)
Q Consensus 145 ~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~ 215 (392)
..... ....|.++...+++++ ..|+.++-|..||..+++... +.. ....|.++... .++.+.++. .
T Consensus 483 -~~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~-~~~~~~l~~~~i~~i~~d-~~g~lWi~T-~ 557 (781)
T 3v9f_A 483 -HHYDTSNSQLLENFVRSIAQDSEGRF-WIGTFGGGVGIYTPDMQLVRK-FNQYEGFCSNTINQIYRS-SKGQMWLAT-G 557 (781)
T ss_dssp -EEECTTTSSCSCSCEEEEEECTTCCE-EEEESSSCEEEECTTCCEEEE-ECTTTTCSCSCEEEEEEC-TTSCEEEEE-T
T ss_pred -ecccCcccccccceeEEEEEcCCCCE-EEEEcCCCEEEEeCCCCeEEE-ccCCCCCCCCeeEEEEEC-CCCCEEEEE-C
Confidence 11111 1357888888887764 455554458889987665433 321 13467888877 556555544 4
Q ss_pred CCeEEEEECCCCceeeeecc----cccceeEEEEcCCCeEEEEcC
Q psy17243 216 DSNLIVWDMETGGEEHFLAG----HLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 216 dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+|.|..||..+++.. .+.. ....|.++...++|.+-+...
T Consensus 558 ~Glv~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t~ 601 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWASTN 601 (781)
T ss_dssp TEEEEESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEEECS
T ss_pred CCceEEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEEEcC
Confidence 666588998776533 2221 123678899999998877753
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.56 E-value=6.8e-06 Score=78.63 Aligned_cols=156 Identities=12% Similarity=0.084 Sum_probs=99.1
Q ss_pred ceEEEEEe-cCCCEEEEEeC-CC----eEEEEEcCCc-eeeee-cccceeEEEEeCCCCEEEEecCC-----CcEEEEeC
Q psy17243 70 TILAVAVL-SDSRRVVTSDK-AG----VIAVWVADNA-QLLYS-ALGPSKCLTVTHNMKYIVSGDGD-----NSLRIWPT 136 (392)
Q Consensus 70 ~v~~~~~~-~~~~~l~~~~~-d~----~i~iwd~~~~-~~~~~-~~~~~~~~~~~~~~~~l~~~~~d-----~~i~~~d~ 136 (392)
.+....|+ |||++|+.+.. +| .|+++|+.++ +.+.. +......+.|+|+++.|+....+ ..|.++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 57889999 99998875543 33 5999999998 64322 22223578899999888877654 25777887
Q ss_pred CCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC---CCcEEEEEcCCC--eE-EEEE-ecCCCceeEEEEecCCCcE
Q psy17243 137 SPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR---DMSLKVWQVVGG--KL-AQVL-VGHTDHVSCVAVAVTNKSL 209 (392)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~--~~-~~~~-~~~~~~v~~~~~~~~~~~~ 209 (392)
.+...................+.|+||+++|+.... ...|+++|+.++ +. +..+ .........+.|+ .++.+
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~-~g~~l 333 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH-GTSHL 333 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE-TTTEE
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee-eCCEE
Confidence 644322222222223344567899999998887653 456888998775 22 1333 2334455556555 45666
Q ss_pred EEEecCC----CeEEEEECCC
Q psy17243 210 VVSGSKD----SNLIVWDMET 226 (392)
Q Consensus 210 l~~~~~d----g~i~iwd~~~ 226 (392)
++....+ ..|..+++.+
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTS
T ss_pred EEEeCCCCCCCcEEEEEcCCC
Confidence 6665544 3677778765
No 278
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.55 E-value=4e-05 Score=70.81 Aligned_cols=161 Identities=12% Similarity=0.055 Sum_probs=98.0
Q ss_pred CeEEEEeCCCCceeEEecc--cc--------cceEEEEEe-cCCC---EEEEEeCCCeEEEEEcCCceeeeecccc--e-
Q psy17243 48 NTAKVWGLTLGSVVSTFKS--HQ--------STILAVAVL-SDSR---RVVTSDKAGVIAVWVADNAQLLYSALGP--S- 110 (392)
Q Consensus 48 g~v~iwd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~- 110 (392)
+.|..+|.++|+.+-.++. |. .++. +... .+|+ .++.++.+|.++++|.++++.+...... +
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 6899999999999877653 22 1222 1221 4664 6788999999999999999876533211 0
Q ss_pred ---------------------------------------------eEEEEeCCCCEEEEec-------------------
Q psy17243 111 ---------------------------------------------KCLTVTHNMKYIVSGD------------------- 126 (392)
Q Consensus 111 ---------------------------------------------~~~~~~~~~~~l~~~~------------------- 126 (392)
..++++|+...+++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 1234555555554432
Q ss_pred --------------CCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEec
Q psy17243 127 --------------GDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVG 192 (392)
Q Consensus 127 --------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 192 (392)
.+|.|..||+.+++..-... ...++..-.+...+.+++.++.|+.++.||.++++.+.+++.
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~----~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHK----EHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEE----ESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEec----CCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 25778888887554322111 111222112223467888899999999999999999988875
Q ss_pred CCCce-eEEEEecCCCcEEEEe
Q psy17243 193 HTDHV-SCVAVAVTNKSLVVSG 213 (392)
Q Consensus 193 ~~~~v-~~~~~~~~~~~~l~~~ 213 (392)
..... .-+.+...+..++++.
T Consensus 526 ~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 526 GSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp SSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCcccCceEEEECCEEEEEEE
Confidence 33221 2245542344455443
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.54 E-value=0.00029 Score=59.77 Aligned_cols=209 Identities=12% Similarity=0.084 Sum_probs=129.0
Q ss_pred eEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEe-CCCeEEEEEcCC----cee--ee-eccccee
Q psy17243 40 FAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSD-KAGVIAVWVADN----AQL--LY-SALGPSK 111 (392)
Q Consensus 40 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~----~~~--~~-~~~~~~~ 111 (392)
+|+.+. ...|+..|++..+....+. .......++|.+.+..|+.+. ..+.|..+++.. ... +. .......
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 344443 3568899998877655554 345678999998776666554 458999999876 221 11 1113456
Q ss_pred EEEEeCCCCEE-EEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCC--CcEEEEEcCCCeEEE
Q psy17243 112 CLTVTHNMKYI-VSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRD--MSLKVWQVVGGKLAQ 188 (392)
Q Consensus 112 ~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~ 188 (392)
.+++.+.+..| ++-...+.|.++++... ...............+++.|.+..|+..... +.|..+++.. +...
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~---~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~ 156 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIY 156 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCC---ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeE
Confidence 88898755545 44466789999998632 1112222234567899999976666655543 6888888753 3333
Q ss_pred EE-ecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeee-c--ccccceeEEEEcCCCeEEEEcC
Q psy17243 189 VL-VGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFL-A--GHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 189 ~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~--~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.+ ...-...+.+++++.++.+.++-...+.|..+|+.... ...+ . ........+++. .+.+.+++.
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~ 226 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDI 226 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEET
T ss_pred EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEEC
Confidence 33 22334678999997677777777778899999987433 2222 2 122345677775 355555553
No 280
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.53 E-value=8e-05 Score=62.94 Aligned_cols=204 Identities=11% Similarity=0.014 Sum_probs=115.7
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCC--CeEEEEeCCCCceeEEecc-cccceEEEEEecCCC
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSED--NTAKVWGLTLGSVVSTFKS-HQSTILAVAVLSDSR 81 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d--g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 81 (392)
++.|..||... +....+. .......+++.++++++++.... ..|..++..+++....... .......++..+++.
T Consensus 52 ~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 129 (306)
T 2p4o_A 52 VGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQ 129 (306)
T ss_dssp TTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSE
T ss_pred CCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCc
Confidence 45666666543 3222222 23467899999999865554332 2477777777765433221 112234455445444
Q ss_pred EEEEEeCCCeEEEEEcCCce--eee--------ecc---cceeEEEEeCCCCEEEEec-CCCcEEEEeCCCCCCCCccee
Q psy17243 82 RVVTSDKAGVIAVWVADNAQ--LLY--------SAL---GPSKCLTVTHNMKYIVSGD-GDNSLRIWPTSPQTHKDDERF 147 (392)
Q Consensus 82 ~l~~~~~d~~i~iwd~~~~~--~~~--------~~~---~~~~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~ 147 (392)
.+++-..++.|+.+|..+++ ... ... .....+ +++++.|+++. ..+.|..|++...........
T Consensus 130 ~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~ 207 (306)
T 2p4o_A 130 YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEI 207 (306)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEE
T ss_pred EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEE
Confidence 44444458899999987642 210 000 122344 78887666554 578999999874211111111
Q ss_pred eeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEE--EEecCCCceeEEEEe---cCCCcEEEEec
Q psy17243 148 TVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQ--VLVGHTDHVSCVAVA---VTNKSLVVSGS 214 (392)
Q Consensus 148 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~---~~~~~~l~~~~ 214 (392)
. ........+++.++|+++++....+.|.++|.. ++... .+.......++++|. |..+.++++..
T Consensus 208 ~-~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 208 F-VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp E-EESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred E-eccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 1 111345668899999887777778899999975 55432 222223567889997 34344444443
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.51 E-value=5e-05 Score=67.43 Aligned_cols=216 Identities=10% Similarity=0.065 Sum_probs=124.3
Q ss_pred CeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCC---C-eEEEEeCCCCce-eEEecccccceEEEEEec-C
Q psy17243 6 CLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSED---N-TAKVWGLTLGSV-VSTFKSHQSTILAVAVLS-D 79 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---g-~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~-~ 79 (392)
+.|+.+|..+++..... ........++++++++++++.... . .+...+...+.. ...+. .-.....+++.| +
T Consensus 162 ~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~ 239 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQN 239 (433)
T ss_dssp SCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTT
T ss_pred CCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCC
Confidence 56777777666554433 344568899999999944443311 1 133333222211 01111 223346688898 6
Q ss_pred CCEEEEEeCCCeEEEEEcCCceeeee---cc--cceeEEEEeCCCCEEEEe-cCCCcEEEEeCCCCCCC-Ccceeeec--
Q psy17243 80 SRRVVTSDKAGVIAVWVADNAQLLYS---AL--GPSKCLTVTHNMKYIVSG-DGDNSLRIWPTSPQTHK-DDERFTVS-- 150 (392)
Q Consensus 80 ~~~l~~~~~d~~i~iwd~~~~~~~~~---~~--~~~~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~-~~~~~~~~-- 150 (392)
+..+++-..++.|+.+|..++..... .. .....++++|+++.|+++ ...+.|+.++....... .......+
T Consensus 240 G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~ 319 (433)
T 4hw6_A 240 GKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQH 319 (433)
T ss_dssp CCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECT
T ss_pred CeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecC
Confidence 66555655678899999986655211 11 122369999999966555 45688999886532111 00001101
Q ss_pred -------------cccceEEEEE---------EcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCC--------------
Q psy17243 151 -------------HSEEITCFTV---------TWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHT-------------- 194 (392)
Q Consensus 151 -------------~~~~v~~~~~---------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------- 194 (392)
.-.....+++ .++++++++-...+.|+.++. ++... .+.+..
T Consensus 320 g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~ 397 (433)
T 4hw6_A 320 SSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDGELRS 397 (433)
T ss_dssp TCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSCCBCEETTT
T ss_pred CCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccccCCCcccc
Confidence 1123567888 566666666666788999985 55433 332211
Q ss_pred ----CceeEEEEecCCCcEEEEecCCCeEEEEECC
Q psy17243 195 ----DHVSCVAVAVTNKSLVVSGSKDSNLIVWDME 225 (392)
Q Consensus 195 ----~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 225 (392)
.....|++.|+++.++++-..++.|+.++++
T Consensus 398 ~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 398 QALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1256788886677777776667778777654
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.49 E-value=0.0004 Score=58.88 Aligned_cols=210 Identities=9% Similarity=0.018 Sum_probs=127.8
Q ss_pred eEEEEeCCCeEEEEeCCCCc--eeEEecccccceEEEEEecCCCEEEEE-eCCCeEEEEEcCCcee----eeecccceeE
Q psy17243 40 FAVSGSEDNTAKVWGLTLGS--VVSTFKSHQSTILAVAVLSDSRRVVTS-DKAGVIAVWVADNAQL----LYSALGPSKC 112 (392)
Q Consensus 40 ~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~----~~~~~~~~~~ 112 (392)
+|+.+. ...|+..+++... ....+. .......++|.+....|+.+ ...+.|..+++..... +..-......
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 344433 4678999988764 222222 23456789999866666555 4567899999876632 1122234567
Q ss_pred EEEeCCCC-EEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC--CCcEEEEEcCCCeEEEE
Q psy17243 113 LTVTHNMK-YIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR--DMSLKVWQVVGGKLAQV 189 (392)
Q Consensus 113 ~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~ 189 (392)
+++.+.+. .+++-...+.|.++++.... ..............+++.|.+..|+.... .+.|..+++........
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSL---RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII 160 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCc---EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE
Confidence 88887554 44555567889999986321 11222234456789999997666666653 57888888753322222
Q ss_pred EecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEc
Q psy17243 190 LVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 190 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
....-...+.+++++.++.+.++-...+.|..+|+..................+++..+ .+..++
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd 225 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTD 225 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEE
T ss_pred EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEe
Confidence 22223456899999767777777778899999998743332223323344566776533 444443
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.48 E-value=0.00015 Score=64.33 Aligned_cols=223 Identities=10% Similarity=0.012 Sum_probs=133.2
Q ss_pred CeeEEEecCC--CCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCC-----eEEEEEcCCc
Q psy17243 28 TVSCVAISPN--SIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAG-----VIAVWVADNA 100 (392)
Q Consensus 28 ~v~~~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~ 100 (392)
....++|+|+ ...|+.+...+.|+.+|..+++...... .......++++++++ |+++...+ .+...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4568999984 3445555444889999988776654443 445688999999999 55554422 2333333222
Q ss_pred ee---eeecccceeEEEEeC-CCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEee-CCCc
Q psy17243 101 QL---LYSALGPSKCLTVTH-NMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGS-RDMS 175 (392)
Q Consensus 101 ~~---~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~ 175 (392)
.. ..........+++++ ++.++++-..++.|+.+|...+...... ...........++|+|++++|+.+. ..+.
T Consensus 218 ~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~-~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEE-VMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEE-EECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEE-eccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 111123445788899 6665555556788999988633221111 1111222234699999999665554 5678
Q ss_pred EEEEEcC--CCeE--EEEEecC---------------CCceeEEEE---------ecCCCcEEEEecCCCeEEEEECCCC
Q psy17243 176 LKVWQVV--GGKL--AQVLVGH---------------TDHVSCVAV---------AVTNKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 176 i~i~d~~--~~~~--~~~~~~~---------------~~~v~~~~~---------~~~~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
|+.++.. ++.. ...+.+. -.....+++ . .++.++++-..++.|+.++. ++
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECC-CC
Confidence 9998865 2321 1122211 123456888 4 66777777777889999985 45
Q ss_pred ceeeeeccc------------------ccceeEEEEc-CCCeEEEEcC
Q psy17243 228 GEEHFLAGH------------------LGCVTCVKLA-GDGTVAMSDL 256 (392)
Q Consensus 228 ~~~~~~~~~------------------~~~v~~~~~~-~dg~~~~~~~ 256 (392)
... .+.+. -..-..+++. ++|.+.+.+.
T Consensus 375 ~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 375 RVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp EEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred CEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 432 32221 1235688999 7888888864
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.48 E-value=0.00055 Score=60.11 Aligned_cols=210 Identities=12% Similarity=0.093 Sum_probs=130.3
Q ss_pred eEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEe-CCCeEEEEEcCCce------eee-eccccee
Q psy17243 40 FAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSD-KAGVIAVWVADNAQ------LLY-SALGPSK 111 (392)
Q Consensus 40 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~------~~~-~~~~~~~ 111 (392)
+|+.+. ...|+..+++.......+. ....+..++|++....|+.+. ..+.|+.+++.... .+. .......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444443 4689999988766554444 456788999998777666664 56789889887521 111 1233567
Q ss_pred EEEEeCC-CCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC--CCcEEEEEcCCCeEEE
Q psy17243 112 CLTVTHN-MKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR--DMSLKVWQVVGGKLAQ 188 (392)
Q Consensus 112 ~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~ 188 (392)
.+++.+. +++.++-...+.|.+.++.... ..............+++.|.+.+|+.... .+.|...++.......
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~---~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCS---EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCc---eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 8899884 4444555567889999886322 22222233455789999997666666553 3788888876443333
Q ss_pred EEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc--cccceeEEEEcCCCeEEEEc
Q psy17243 189 VLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG--HLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 189 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~dg~~~~~~ 255 (392)
.....-...+.|++++.++.+.++-...+.|..+|+........... .......+++. .+.+..++
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd 307 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTD 307 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEE
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEec
Confidence 33333356789999977777777777788999999875433222222 22344566663 34444554
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=0.00021 Score=63.41 Aligned_cols=216 Identities=6% Similarity=0.043 Sum_probs=125.0
Q ss_pred CeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCC-C----eEEEEeCCCCcee--EEecccccceEEEEEec
Q psy17243 6 CLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSED-N----TAKVWGLTLGSVV--STFKSHQSTILAVAVLS 78 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-g----~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~ 78 (392)
+.|+.+|+++++..... ........++|++++++|+.+... + .+.+.+. .+... ..+. .......++++|
T Consensus 159 ~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp 235 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHP 235 (430)
T ss_dssp EEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECT
T ss_pred CcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeC
Confidence 56778887765544333 345568899999999966665542 2 2333443 33222 2222 123356788999
Q ss_pred -CCCEEEEEeCCCeEEEEEcCCceee--eecc--cceeEEEEeCCCCEEEEe-cCCCcEEEEeCCCCCCC-Ccceeeec-
Q psy17243 79 -DSRRVVTSDKAGVIAVWVADNAQLL--YSAL--GPSKCLTVTHNMKYIVSG-DGDNSLRIWPTSPQTHK-DDERFTVS- 150 (392)
Q Consensus 79 -~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~--~~~~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~-~~~~~~~~- 150 (392)
++..+++-...+.|..++...+... .... .....++++|++++|+++ ...+.|..++....... .......+
T Consensus 236 ~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~ 315 (430)
T 3tc9_A 236 INGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQ 315 (430)
T ss_dssp TTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEC
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEecc
Confidence 6666666667789999999877642 2221 235689999999955555 56788999876532110 00000000
Q ss_pred --------------cccceE-EEEEE--------cCCCEEEEeeCCCcEEEEEcCCCeEEEEEec----C----C-----
Q psy17243 151 --------------HSEEIT-CFTVT--------WDSQYLITGSRDMSLKVWQVVGGKLAQVLVG----H----T----- 194 (392)
Q Consensus 151 --------------~~~~v~-~~~~~--------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~----~----- 194 (392)
.-.... .++.. +++.++++-...+.|+.++ .+++.....-. . .
T Consensus 316 ~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~ 394 (430)
T 3tc9_A 316 QGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQ 394 (430)
T ss_dssp TTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTT
T ss_pred CCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchh
Confidence 011123 45453 2355555555567888888 45654333211 0 1
Q ss_pred ----CceeEEEEecCCCcEEEEecCCCeEEEEECC
Q psy17243 195 ----DHVSCVAVAVTNKSLVVSGSKDSNLIVWDME 225 (392)
Q Consensus 195 ----~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 225 (392)
.....+++.|.++.++++-..++.|+.++++
T Consensus 395 ~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 395 EARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred hcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 1467888885467777776677788877754
No 286
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.42 E-value=1.5e-05 Score=75.11 Aligned_cols=223 Identities=11% Similarity=0.095 Sum_probs=130.0
Q ss_pred EEEecC-CCCeEEEEeCCC-----------eEEEEeCCCCcee--EEecc-cccceEEEEEecCCCEEEEEeC-CCeEEE
Q psy17243 31 CVAISP-NSIFAVSGSEDN-----------TAKVWGLTLGSVV--STFKS-HQSTILAVAVLSDSRRVVTSDK-AGVIAV 94 (392)
Q Consensus 31 ~~~~~~-~~~~l~~~~~dg-----------~v~iwd~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d~~i~i 94 (392)
++++.+ ++++++.|+.+. .+.+||..+++.. ..+.. +.....++++..+++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 888888887543 5889999887532 22221 2233445777889999999884 468999
Q ss_pred EEcCCceeeeecc--cc--eeEEEEeCCCCEEEEec-CC-----CcEEEEeCCCCCCCCc-----ceeeeccccceEEEE
Q psy17243 95 WVADNAQLLYSAL--GP--SKCLTVTHNMKYIVSGD-GD-----NSLRIWPTSPQTHKDD-----ERFTVSHSEEITCFT 159 (392)
Q Consensus 95 wd~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~-~d-----~~i~~~d~~~~~~~~~-----~~~~~~~~~~v~~~~ 159 (392)
||..+.+-..... .+ ..+++..++++.++.|+ .+ ..+.+||..+...... ......... ..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~----~~ 345 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ----GL 345 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT----GG
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc----ce
Confidence 9998775433221 11 12455667899999988 34 5689999875432211 000000000 01
Q ss_pred EEcCCCEEEEeeCC---------CcEEEEEcCCCeEEEEEecCC---------CceeEEEEecCCCcEEEEecCCC----
Q psy17243 160 VTWDSQYLITGSRD---------MSLKVWQVVGGKLAQVLVGHT---------DHVSCVAVAVTNKSLVVSGSKDS---- 217 (392)
Q Consensus 160 ~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~~~~~dg---- 217 (392)
+..++..++.++.+ ..+..||..+.........+. ..-.++.+...++.+++.|+.++
T Consensus 346 ~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~ 425 (656)
T 1k3i_A 346 YRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS 425 (656)
T ss_dssp GTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS
T ss_pred eecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC
Confidence 11233444444333 457889988765443322221 12344455445788888888543
Q ss_pred -------eEEEEECCCCceeeee--cccccc-eeEEEEcCCCeEEEEcCC
Q psy17243 218 -------NLIVWDMETGGEEHFL--AGHLGC-VTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 218 -------~i~iwd~~~~~~~~~~--~~~~~~-v~~~~~~~dg~~~~~~~~ 257 (392)
.|.+||..+.+-.... ..+... -.+++..|+|++++.+..
T Consensus 426 ~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~ 475 (656)
T 1k3i_A 426 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQ 475 (656)
T ss_dssp BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCB
T ss_pred CcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCc
Confidence 6888888776544332 222222 345567789999998864
No 287
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.42 E-value=4e-06 Score=79.23 Aligned_cols=224 Identities=14% Similarity=0.027 Sum_probs=132.2
Q ss_pred CeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEE-eCCCeEEEEeCCC----CceeEEecccccceEEEEEecCC
Q psy17243 6 CLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSG-SEDNTAKVWGLTL----GSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
+.|++.++.+.+....+.. ...+..++|.+.+..|+.+ ...+.|..+++.. ......+.........|++.+.+
T Consensus 386 ~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred cceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 4577777766554444432 3456789999866656554 4557899999875 22222222112234567777554
Q ss_pred CEEE-EEeCCCeEEEEEcCCceeeeec---ccceeEEEEeCCCCEEEEecC--CCcEEEEeCCCCCCCCcceeeeccccc
Q psy17243 81 RRVV-TSDKAGVIAVWVADNAQLLYSA---LGPSKCLTVTHNMKYIVSGDG--DNSLRIWPTSPQTHKDDERFTVSHSEE 154 (392)
Q Consensus 81 ~~l~-~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~ 154 (392)
..|+ +-...+.|.++++......... ......+++.|.+.+|+.+.. .+.|.++++..... ..+....-..
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~---~~l~~~~l~~ 541 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQW 541 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC---CEESCSSCSS
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe---eEEEeCCCCC
Confidence 4444 4455678999998765433222 234568889987666666543 26788877753221 1111122344
Q ss_pred eEEEEEEcCCCEEEEe-eCCCcEEEEEcCCCeEEEEEec--CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceee
Q psy17243 155 ITCFTVTWDSQYLITG-SRDMSLKVWQVVGGKLAQVLVG--HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 155 v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 231 (392)
...|+++|++..|+.+ ...+.|..+++........+.. .......|++. .+.++++....+.|..++..+++.+.
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd--~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEE--TTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEE--CCEEEEEeCCCCeEEEEEccCCCceE
Confidence 5779999876555544 4567899999864332222221 11233456665 34677777778899999988888777
Q ss_pred eecc
Q psy17243 232 FLAG 235 (392)
Q Consensus 232 ~~~~ 235 (392)
.+..
T Consensus 620 ~i~~ 623 (699)
T 1n7d_A 620 LLAE 623 (699)
T ss_dssp CCCT
T ss_pred Eeec
Confidence 6653
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.36 E-value=0.00087 Score=63.96 Aligned_cols=211 Identities=12% Similarity=0.086 Sum_probs=129.7
Q ss_pred eEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEE-eCCCeEEEEEcCCc------eeee-eccccee
Q psy17243 40 FAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTS-DKAGVIAVWVADNA------QLLY-SALGPSK 111 (392)
Q Consensus 40 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~------~~~~-~~~~~~~ 111 (392)
+|+.+ ....|+..++........+. ....+..++|.+....|+.+ ...+.|+.+++... ..+. .......
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccccc-cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 44444 34568888887665544444 34567899999866665555 45578888888753 1111 1234556
Q ss_pred EEEEeCCCCEEEE-ecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC--CCcEEEEEcCCCeEEE
Q psy17243 112 CLTVTHNMKYIVS-GDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR--DMSLKVWQVVGGKLAQ 188 (392)
Q Consensus 112 ~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~ 188 (392)
.+++.+.+..|+. -...+.|.+.++... ....+..........|++.|...+|+.... .+.|...++.......
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~---~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSS---SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCC---eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 8999987755554 455789999998632 222222234456789999998666666653 2678888886544433
Q ss_pred EEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc--cccceeEEEEcCCCeEEEEcC
Q psy17243 189 VLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG--HLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 189 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.+...-...+.|++.+..+.++++-...+.|...++........+.. .......|++..+ .+.+++.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~ 620 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDI 620 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEET
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEEC
Confidence 34333457889999977777777767778999999875443333332 1223446666433 4555543
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.34 E-value=0.0012 Score=61.49 Aligned_cols=224 Identities=10% Similarity=0.014 Sum_probs=131.5
Q ss_pred CCeEEEEECCCcc-ceeeeccCCcCeeEEEecCCCCeEEEE-eCCCeEEEEeCCCCce-eEEecccccceEEEEEecCCC
Q psy17243 5 DCLVNVWQMNSHE-LQSTMEGHLNTVSCVAISPNSIFAVSG-SEDNTAKVWGLTLGSV-VSTFKSHQSTILAVAVLSDSR 81 (392)
Q Consensus 5 dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~dg~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 81 (392)
...|++.++.... ....+...-.....++|++.+..|+.+ ...+.|..++++.... ...+...-.....+++.+.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 4678888887543 122222234557899999966555544 4567898898875532 223332235678999998666
Q ss_pred EEEEE-eCCCeEEEEEcCCcee--ee-ecccceeEEEEeCCCCEEEEecC--CCcEEEEeCCCCCCCCcceeeeccccce
Q psy17243 82 RVVTS-DKAGVIAVWVADNAQL--LY-SALGPSKCLTVTHNMKYIVSGDG--DNSLRIWPTSPQTHKDDERFTVSHSEEI 155 (392)
Q Consensus 82 ~l~~~-~~d~~i~iwd~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~v 155 (392)
.|+.+ ...+.|.+.++..... +. ........+++.|.+..|+.... .+.|...++... .........-...
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~---~~~~l~~~~~~~P 173 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS---SRFIIINSEIYWP 173 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC---SCEEEECSSCSSE
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC---ceEEEEeCCCCCC
Confidence 55555 4568999999876532 22 22335678999997666666553 467777776522 1112222234567
Q ss_pred EEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeee
Q psy17243 156 TCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 156 ~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 233 (392)
..+++++++..|+.+. ..+.|..+|+..........+.......+++. .+.++++-..++.|...|..+++....+
T Consensus 174 ~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~--~~~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 174 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEES--SSEEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred cEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEe--CCEEEEecCCCCEEEEEECCCCcccEEE
Confidence 8999999766666554 46789999986544333222122233466665 3366666667888999998877654433
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.29 E-value=0.00055 Score=57.77 Aligned_cols=182 Identities=11% Similarity=0.217 Sum_probs=117.1
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCC----CC---eEEEEe-C--CCeEEEEeCC--CCceeEEecc------
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPN----SI---FAVSGS-E--DNTAKVWGLT--LGSVVSTFKS------ 66 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~----~~---~l~~~~-~--dg~v~iwd~~--~~~~~~~~~~------ 66 (392)
.+-+.+||+ +++.++.+.. +.++.+..-|+ ++ ++++.. . +++|.+|+++ ++. +..+..
T Consensus 49 ~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~ 124 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIA 124 (355)
T ss_dssp TTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEE
T ss_pred CCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcC
Confidence 467999999 7888888864 56777777663 22 233333 3 5789999763 433 444421
Q ss_pred cc-cceEEEEE--ecC-CC-EEEEEeCCCeEEEEEcC---C----ceeeeec--ccceeEEEEeCCCCEEEEecCCCcEE
Q psy17243 67 HQ-STILAVAV--LSD-SR-RVVTSDKAGVIAVWVAD---N----AQLLYSA--LGPSKCLTVTHNMKYIVSGDGDNSLR 132 (392)
Q Consensus 67 ~~-~~v~~~~~--~~~-~~-~l~~~~~d~~i~iwd~~---~----~~~~~~~--~~~~~~~~~~~~~~~l~~~~~d~~i~ 132 (392)
.. ..+..+++ +|. ++ ++++...+|.+..|++. . .+.++++ ...+..+...+....|+++-++..|.
T Consensus 125 t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw 204 (355)
T 3amr_A 125 TAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIW 204 (355)
T ss_dssp CCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEE
T ss_pred CCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEE
Confidence 11 45666777 664 43 68888999999999883 2 2444443 34667888889899999999998787
Q ss_pred EEeCCCCCCCC--cceee-ec-cccceEEEEEE--cCCC-EEEEee-CCCcEEEEEcC-CCeEEEEE
Q psy17243 133 IWPTSPQTHKD--DERFT-VS-HSEEITCFTVT--WDSQ-YLITGS-RDMSLKVWQVV-GGKLAQVL 190 (392)
Q Consensus 133 ~~d~~~~~~~~--~~~~~-~~-~~~~v~~~~~~--~~~~-~l~~~~-~dg~i~i~d~~-~~~~~~~~ 190 (392)
.|+.+...... ..... .. ....+..|++- ++++ +|++++ .+....+||.. +.+.+..+
T Consensus 205 ~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 205 KFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 78865332111 11111 11 12467888874 4555 666666 57799999986 55555555
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=0.0019 Score=57.64 Aligned_cols=226 Identities=9% Similarity=0.028 Sum_probs=134.1
Q ss_pred eeEEEecC-CCCeEEEE-eCCCeEEEEeCCCCceeEEeccc---ccceEEEEE-------ecCCCEEEEEeCCC------
Q psy17243 29 VSCVAISP-NSIFAVSG-SEDNTAKVWGLTLGSVVSTFKSH---QSTILAVAV-------LSDSRRVVTSDKAG------ 90 (392)
Q Consensus 29 v~~~~~~~-~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~d~------ 90 (392)
...|+|.| +...|+.+ ...+.|++.|++++.....+... ......++| +++++.|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56899998 34445444 43467889998887665544422 235789999 99999777776654
Q ss_pred -eEEEEEcCC-cee--------eeecccceeEEEEeCC-CCEEEEecCCCcEEEEeCC-------CCCCC-----C----
Q psy17243 91 -VIAVWVADN-AQL--------LYSALGPSKCLTVTHN-MKYIVSGDGDNSLRIWPTS-------PQTHK-----D---- 143 (392)
Q Consensus 91 -~i~iwd~~~-~~~--------~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~-------~~~~~-----~---- 143 (392)
.|.+++... +.. +... .....++++|+ +.++++-..++.|..+|+. +.... .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 256665443 121 2222 24457888994 5555566678889999986 33320 0
Q ss_pred -cceeeeccccceEEEEEEcCCCEEEEe-eCCCcEEEEEc--CCCeE--EEEEecC---C------------Ccee-EEE
Q psy17243 144 -DERFTVSHSEEITCFTVTWDSQYLITG-SRDMSLKVWQV--VGGKL--AQVLVGH---T------------DHVS-CVA 201 (392)
Q Consensus 144 -~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~--~~~~~--~~~~~~~---~------------~~v~-~~~ 201 (392)
..............++|+|++++|+.+ .....|+.++. ..+.. ...+.+. . .... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 011122233456789999999965555 45678888665 33322 1222221 0 1123 334
Q ss_pred Eec------CCCcEEEEecCCCeEEEEECCCCceeeeeccc------------------------ccceeEEEEcCC-Ce
Q psy17243 202 VAV------TNKSLVVSGSKDSNLIVWDMETGGEEHFLAGH------------------------LGCVTCVKLAGD-GT 250 (392)
Q Consensus 202 ~~~------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------------------~~~v~~~~~~~d-g~ 250 (392)
... .++.++++=..+..|+.++ .++. +.++.+. -..-..|++.++ |.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 431 3456777777788999998 4553 3333221 123567888886 88
Q ss_pred EEEEcCC
Q psy17243 251 VAMSDLP 257 (392)
Q Consensus 251 ~~~~~~~ 257 (392)
+.+.+..
T Consensus 458 lyVaD~~ 464 (496)
T 3kya_A 458 FYVHDQV 464 (496)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 8888753
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.28 E-value=0.0005 Score=57.51 Aligned_cols=198 Identities=10% Similarity=0.015 Sum_probs=123.4
Q ss_pred CCcCeeEEEecCCCCeEEEEe-CCCeEEEEeCCCCceeEE-ecc----c--ccceEEEEE---ecCCCEEEEEe------
Q psy17243 25 HLNTVSCVAISPNSIFAVSGS-EDNTAKVWGLTLGSVVST-FKS----H--QSTILAVAV---LSDSRRVVTSD------ 87 (392)
Q Consensus 25 h~~~v~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~------ 87 (392)
...---+++|.+....|+.++ ..++|..|+...+..... +.. . ...+..+.| .|+++++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 334445789988555555555 789999999876644333 221 1 113688999 58876666543
Q ss_pred -------CCCeEEEEEcC---Cceeeeecc----------------cceeEEEEeCCCCEEEEecCC-CcEEEEeCCCCC
Q psy17243 88 -------KAGVIAVWVAD---NAQLLYSAL----------------GPSKCLTVTHNMKYIVSGDGD-NSLRIWPTSPQT 140 (392)
Q Consensus 88 -------~d~~i~iwd~~---~~~~~~~~~----------------~~~~~~~~~~~~~~l~~~~~d-~~i~~~d~~~~~ 140 (392)
.+..+..+|+. +++.+.... .....+++.++|+..++++.. +.|..++....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~- 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK- 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-
Confidence 26789999999 776654322 136789999999999988887 88777776532
Q ss_pred CCCcceeee-----ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeE--EEEEe-cC---CCceeEE-EEecCCCc
Q psy17243 141 HKDDERFTV-----SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKL--AQVLV-GH---TDHVSCV-AVAVTNKS 208 (392)
Q Consensus 141 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~-~~---~~~v~~~-~~~~~~~~ 208 (392)
....... ......+.|+++|+++.|++....|.|..+|+.+... +..-. +. -.....+ ..- .+++
T Consensus 170 --~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~-~~G~ 246 (334)
T 2p9w_A 170 --TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVP-VGNE 246 (334)
T ss_dssp --CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEE-ETTE
T ss_pred --EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccc-cCCE
Confidence 1111111 1122367899999999888887799999999885432 21110 21 1123333 222 3455
Q ss_pred E-EEEecCCCeEEEEECCC
Q psy17243 209 L-VVSGSKDSNLIVWDMET 226 (392)
Q Consensus 209 ~-l~~~~~dg~i~iwd~~~ 226 (392)
. +++....+.+.+.+.+.
T Consensus 247 vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 247 SVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEEETTEEEEEECSST
T ss_pred EEEEEcCCCCEEEEECCCC
Confidence 5 56655666666666544
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.25 E-value=0.0031 Score=58.69 Aligned_cols=222 Identities=8% Similarity=0.008 Sum_probs=142.2
Q ss_pred cCCeEEEEECCCccceeeec-cCCcCeeEEEecCCCCeEE-EEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCC
Q psy17243 4 MDCLVNVWQMNSHELQSTME-GHLNTVSCVAISPNSIFAV-SGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSR 81 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 81 (392)
..+.|+..++.+.+....+. ..-.....++|++.+..|+ +-..++.|..++++.......+.........+++.+.+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 34678888887654433322 1234678999999655554 555678999999876544433432234567889987766
Q ss_pred EEEEE-eCCCeEEEEEcCCcee--ee-ecccceeEEEEeCCCCEEEEecC--CCcEEEEeCCCCCCCCcceeeeccccce
Q psy17243 82 RVVTS-DKAGVIAVWVADNAQL--LY-SALGPSKCLTVTHNMKYIVSGDG--DNSLRIWPTSPQTHKDDERFTVSHSEEI 155 (392)
Q Consensus 82 ~l~~~-~~d~~i~iwd~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~v 155 (392)
.|+.+ ...+.|.+.++..... +. ........+++.|....|+.... .+.|...++.... .... ...-...
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~---~~~l-~~~~~~P 168 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE---RTTL-VPNVGRA 168 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEE-ECSCSSE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc---eEEE-ECCCCCc
Confidence 66554 4567899999876532 22 22235678999986666666653 5678888876332 1111 2344567
Q ss_pred EEEEEEcCCCEEEEee-CCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeee
Q psy17243 156 TCFTVTWDSQYLITGS-RDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHF 232 (392)
Q Consensus 156 ~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 232 (392)
..++++++++.|+.+. ..+.|..+|+..... ..+.........+++. .+.++++-...+.|...|..+++....
T Consensus 169 ~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~--~~~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQY--QDYIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred ceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEE--CCEEEEecCCCCEEEEEECCCCCceEE
Confidence 8999999877666665 467899999865433 3333334445678876 356777766788999999777654433
No 294
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.20 E-value=0.0022 Score=55.16 Aligned_cols=225 Identities=11% Similarity=0.093 Sum_probs=126.2
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCce--eEEec---ccccceEEEEEecC---CCEEEEEeCC------Ce
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSV--VSTFK---SHQSTILAVAVLSD---SRRVVTSDKA------GV 91 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~d------~~ 91 (392)
-..-..|+|.|+|++++ +..+|.|.+++ +++. +..+. ........++++|+ +..|+++... +.
T Consensus 30 l~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 34567999999998554 45679999998 4432 22221 12356789999998 5555554432 67
Q ss_pred EEEEEcCCc-----eeeee-cc------cceeEEEEeCCCCEEEEecC-------------CCcEEEEeCCCCCC-----
Q psy17243 92 IAVWVADNA-----QLLYS-AL------GPSKCLTVTHNMKYIVSGDG-------------DNSLRIWPTSPQTH----- 141 (392)
Q Consensus 92 i~iwd~~~~-----~~~~~-~~------~~~~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~~~----- 141 (392)
|..++.... +.+.. +. .....+++.|++.+.++.+. .+.|..++....-.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 888887643 12211 22 12357999999976555332 25666666542100
Q ss_pred -----CCcceeeeccccceEEEEEEc-CCCEEEEeeCCCcE------EEEEcCCCe------------------EEEEEe
Q psy17243 142 -----KDDERFTVSHSEEITCFTVTW-DSQYLITGSRDMSL------KVWQVVGGK------------------LAQVLV 191 (392)
Q Consensus 142 -----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i------~i~d~~~~~------------------~~~~~~ 191 (392)
........++ .....++|+| +++++++-.....+ .+.-+..+. ++..+.
T Consensus 187 ~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 187 LGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred cCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 0111122222 3356788999 56544443322221 122222221 222332
Q ss_pred cCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCce------eeeecccccceeEEEEcCCCeEEEEcCC
Q psy17243 192 GHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGE------EHFLAGHLGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 192 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~v~~~~~~~dg~~~~~~~~ 257 (392)
+......++|. ++.++++.-..+.|...++..... ...+......+..+++.|||.+.++...
T Consensus 266 -~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 266 -QGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp -TCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred -CCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 22345667774 567777777778888888764431 1222222357899999999998887653
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.06 E-value=0.0053 Score=54.85 Aligned_cols=223 Identities=9% Similarity=0.052 Sum_probs=126.5
Q ss_pred CeEEEEECCCccceeeeccC---CcCeeEEEe-------cCCCCeEEEEeCCC-------eEEEEeCCC-Ccee-----E
Q psy17243 6 CLVNVWQMNSHELQSTMEGH---LNTVSCVAI-------SPNSIFAVSGSEDN-------TAKVWGLTL-GSVV-----S 62 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~h---~~~v~~~~~-------~~~~~~l~~~~~dg-------~v~iwd~~~-~~~~-----~ 62 (392)
+.|++.|++++++...+... ......++| ++++++|+.+...+ .|.+.+... +... .
T Consensus 162 ~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~ 241 (496)
T 3kya_A 162 KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQ 241 (496)
T ss_dssp EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEE
T ss_pred CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccce
Confidence 45778887776655444322 235789999 99998666665543 266665443 2221 2
Q ss_pred EecccccceEEEEEecC-CCEEEEEeCCCeEEEEEcC-------Ccee--------------eeecc--cceeEEEEeCC
Q psy17243 63 TFKSHQSTILAVAVLSD-SRRVVTSDKAGVIAVWVAD-------NAQL--------------LYSAL--GPSKCLTVTHN 118 (392)
Q Consensus 63 ~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~-------~~~~--------------~~~~~--~~~~~~~~~~~ 118 (392)
.+... .....++++|+ +.++++-..++.|..+|+. ++.. +.... .....++++|+
T Consensus 242 ~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~ 320 (496)
T 3kya_A 242 LIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPT 320 (496)
T ss_dssp EEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTT
T ss_pred eeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCC
Confidence 22211 23457788995 4455556677889999997 4443 11121 22468999999
Q ss_pred CCEEEEe-cCCCcEEEEeCCCCCCC-Ccceeeec---------------cccceE-EEEEE-------cCCCEEEEeeCC
Q psy17243 119 MKYIVSG-DGDNSLRIWPTSPQTHK-DDERFTVS---------------HSEEIT-CFTVT-------WDSQYLITGSRD 173 (392)
Q Consensus 119 ~~~l~~~-~~d~~i~~~d~~~~~~~-~~~~~~~~---------------~~~~v~-~~~~~-------~~~~~l~~~~~d 173 (392)
++.|+++ ...+.|+.++....... .......+ .-.... .++.. +++.++++-...
T Consensus 321 G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N 400 (496)
T 3kya_A 321 GKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLN 400 (496)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGG
T ss_pred CCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCC
Confidence 9965555 45678888665421110 00001101 001233 44444 455666666667
Q ss_pred CcEEEEEcCCCeEEEEEecCC------------------------CceeEEEEecCCCcEEEEecCCCeEEEEECCCCce
Q psy17243 174 MSLKVWQVVGGKLAQVLVGHT------------------------DHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGE 229 (392)
Q Consensus 174 g~i~i~d~~~~~~~~~~~~~~------------------------~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 229 (392)
..|+.++ .++. +.++.+.. .....|++.+.++.++++=..+..|+.++++....
T Consensus 401 ~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 401 FCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp TEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred CEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 8899998 4564 34443220 12457788743467777666777888888765544
Q ss_pred ee
Q psy17243 230 EH 231 (392)
Q Consensus 230 ~~ 231 (392)
+.
T Consensus 479 ~~ 480 (496)
T 3kya_A 479 VA 480 (496)
T ss_dssp --
T ss_pred cc
Confidence 43
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.04 E-value=0.006 Score=56.74 Aligned_cols=206 Identities=10% Similarity=0.024 Sum_probs=118.5
Q ss_pred CCCeEEEEeCCCCc-eeEEecccccceEEEEEecCCCEEEEEeC-CCeEEEEEcCCcee---ee-ecccceeEEEEeCCC
Q psy17243 46 EDNTAKVWGLTLGS-VVSTFKSHQSTILAVAVLSDSRRVVTSDK-AGVIAVWVADNAQL---LY-SALGPSKCLTVTHNM 119 (392)
Q Consensus 46 ~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~---~~-~~~~~~~~~~~~~~~ 119 (392)
....|+..+++... ........-.....++|++.+..|+.+.. .+.|..++++.... +. .-......+++.+.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~ 95 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 95 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTT
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecC
Confidence 35678888887543 12222223445789999997777776654 57888888876531 11 112456789999865
Q ss_pred CEEEE-ecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC--CCcEEEEEcCCCeEEEEEecCCCc
Q psy17243 120 KYIVS-GDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR--DMSLKVWQVVGGKLAQVLVGHTDH 196 (392)
Q Consensus 120 ~~l~~-~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~ 196 (392)
..|+. -...+.|.+.++..... .......-.....+++.|.+.+|+.... .+.|...++............-..
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~---~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~ 172 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLR---KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW 172 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC---EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSS
T ss_pred CEEEEEeCCCCEEEEEECCCCCE---EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCC
Confidence 55544 45678999999863321 1222233455678999998666666553 467777776533332333233456
Q ss_pred eeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEcCCCeEEEEc
Q psy17243 197 VSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 197 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~~~ 255 (392)
.+.+++++.++.+.++-...+.|...|+..........+.......+++..+ .+..++
T Consensus 173 P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td 230 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTD 230 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEEC
T ss_pred CcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEec
Confidence 7899999777777777777889999998754332222212223346666655 444444
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.95 E-value=0.0026 Score=53.33 Aligned_cols=214 Identities=12% Similarity=0.081 Sum_probs=108.9
Q ss_pred CeEEEEECCCcccee--eeccCCcCeeEEEecCCCCeEEEEeCC-----CeEEEEeCCCCc---eeE--EecccccceEE
Q psy17243 6 CLVNVWQMNSHELQS--TMEGHLNTVSCVAISPNSIFAVSGSED-----NTAKVWGLTLGS---VVS--TFKSHQSTILA 73 (392)
Q Consensus 6 g~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~---~~~--~~~~~~~~v~~ 73 (392)
..+.+||..+.+-.. .+....... +++ ..++.+++.|+.+ ..+.+||..+.+ -.. .+......- +
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~ 107 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYV-ASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-G 107 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-E
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccc-cEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-e
Confidence 468888887654222 222111111 222 2356677777754 468999988766 322 222111111 2
Q ss_pred EEEecCCCEEEEEeCC-----CeEEEEEcCCceeee--ecccce-eEEEEeCCCCEEEEecCC-----CcEEEEeCCCCC
Q psy17243 74 VAVLSDSRRVVTSDKA-----GVIAVWVADNAQLLY--SALGPS-KCLTVTHNMKYIVSGDGD-----NSLRIWPTSPQT 140 (392)
Q Consensus 74 ~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~--~~~~~~-~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~ 140 (392)
++. .+++.++.|+.+ ..+.+||+.+.+-.. ....+. ...+...+++.++.|+.+ ..+.+||+.+..
T Consensus 108 ~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 108 ATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp EEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 222 256666666543 368889988765332 221111 112222366777777654 468889987543
Q ss_pred CCCcceeeeccccceEEEEEEcCCCEEEEeeCC-----CcEEEEEcCCCeEEEEEecCCCce-eEEEEecCCCcEEEEec
Q psy17243 141 HKDDERFTVSHSEEITCFTVTWDSQYLITGSRD-----MSLKVWQVVGGKLAQVLVGHTDHV-SCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 141 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~ 214 (392)
....... .....-.++.. .++++++.|+.+ ..+.+||+.+.+-...-....... .+++. .++.+++.|+
T Consensus 187 W~~~~~~--p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG 261 (301)
T 2vpj_A 187 WTNVTPM--ATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAG 261 (301)
T ss_dssp EEEECCC--SSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECC
T ss_pred EEeCCCC--CcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcC
Confidence 3222111 11111112222 256677777653 468999998876443321111111 12222 2566777776
Q ss_pred CC-----CeEEEEECCCCc
Q psy17243 215 KD-----SNLIVWDMETGG 228 (392)
Q Consensus 215 ~d-----g~i~iwd~~~~~ 228 (392)
.+ ..+.+||+.+.+
T Consensus 262 ~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp BCSSSBEEEEEEEETTTTE
T ss_pred cCCCcccccEEEEcCCCCe
Confidence 55 357788887654
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.89 E-value=0.0092 Score=51.30 Aligned_cols=228 Identities=10% Similarity=0.050 Sum_probs=128.5
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc-eeEEec---ccccceEEEEEecC---CCEEEEEeC----C----C
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS-VVSTFK---SHQSTILAVAVLSD---SRRVVTSDK----A----G 90 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----~ 90 (392)
-..-..|+|.|+++++ .+..+|.|.+++ .+++ .+..+. ........|+++|+ +..|+++.. + .
T Consensus 28 l~~P~~ia~~pdG~l~-V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYL-VTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEE-EEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEE-EEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3456899999999854 455679999997 4554 222221 12356889999997 555555443 2 5
Q ss_pred eEEEEEcCCc-------eeeee-cc----cceeEEEEeCCCCEEEEecC-------------CCcEEEEeCCCCCCC---
Q psy17243 91 VIAVWVADNA-------QLLYS-AL----GPSKCLTVTHNMKYIVSGDG-------------DNSLRIWPTSPQTHK--- 142 (392)
Q Consensus 91 ~i~iwd~~~~-------~~~~~-~~----~~~~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~~~~--- 142 (392)
.|..++.... +.+.. .. .....+.|.|++.+.++.+. .|.|..++....-..
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6777877654 11211 11 12357899999986665432 245666665421000
Q ss_pred --CcceeeeccccceEEEEEEc-CCCEEEEeeCCC---cEEEEEcCC----------------CeEEEEEecCCCceeEE
Q psy17243 143 --DDERFTVSHSEEITCFTVTW-DSQYLITGSRDM---SLKVWQVVG----------------GKLAQVLVGHTDHVSCV 200 (392)
Q Consensus 143 --~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg---~i~i~d~~~----------------~~~~~~~~~~~~~v~~~ 200 (392)
.......++ .....++|+| +++++++-.... .|.+..... ..++..+.........+
T Consensus 186 f~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 186 FPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp STTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 111122233 3346789999 565444432221 233332110 01223331122356677
Q ss_pred EEec------CCCcEEEEecCCCeEEEEECCCC-cee--eee-cccccceeEEEEcCCCeEEEEcC
Q psy17243 201 AVAV------TNKSLVVSGSKDSNLIVWDMETG-GEE--HFL-AGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 201 ~~~~------~~~~~l~~~~~dg~i~iwd~~~~-~~~--~~~-~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
+|.. .++.++++.-..+.|...++... +.. ..+ .+....+..+++.|||.+.+++.
T Consensus 265 ~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 7731 35677777777888999988753 322 222 22345789999999999888764
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.89 E-value=0.0055 Score=51.29 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=93.7
Q ss_pred cCCeEEEEECCCccceee-ecc----C--CcCeeEEEe---cCCCCeEEEEe-------------CCCeEEEEeCC---C
Q psy17243 4 MDCLVNVWQMNSHELQST-MEG----H--LNTVSCVAI---SPNSIFAVSGS-------------EDNTAKVWGLT---L 57 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~-~~~----h--~~~v~~~~~---~~~~~~l~~~~-------------~dg~v~iwd~~---~ 57 (392)
..+.|..|+...+..... +.+ . ...+..|.| .|+++++++.. .+..|..||+. +
T Consensus 33 ~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~t 112 (334)
T 2p9w_A 33 YKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSEN 112 (334)
T ss_dssp TTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTT
T ss_pred cCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCC
Confidence 368899998875533322 221 1 113579999 68877776543 26789999999 7
Q ss_pred CceeEEec--cc-----------ccceEEEEEecCCCEEEEEeCC-CeEEEEEcCCceeeeec--c------cceeEEEE
Q psy17243 58 GSVVSTFK--SH-----------QSTILAVAVLSDSRRVVTSDKA-GVIAVWVADNAQLLYSA--L------GPSKCLTV 115 (392)
Q Consensus 58 ~~~~~~~~--~~-----------~~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~~~~~--~------~~~~~~~~ 115 (392)
++.+.... .. ......++..++|+..++++.. +.|...+.......... . ...+.+++
T Consensus 113 g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~ 192 (334)
T 2p9w_A 113 SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITF 192 (334)
T ss_dssp CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEE
T ss_pred CCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEE
Confidence 87765443 11 1248899999999999988888 88887777654322111 1 12458999
Q ss_pred eCCCCEEEEecCCCcEEEEeCC
Q psy17243 116 THNMKYIVSGDGDNSLRIWPTS 137 (392)
Q Consensus 116 ~~~~~~l~~~~~d~~i~~~d~~ 137 (392)
+|+++.|++....|.|..+|+.
T Consensus 193 ~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 193 DPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp ETTTTEEEEESSSSSEEEEECS
T ss_pred eCCCCEEEEEcCCCeEEEEcCC
Confidence 9999999998889999999987
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.89 E-value=0.00016 Score=68.36 Aligned_cols=177 Identities=12% Similarity=0.065 Sum_probs=108.3
Q ss_pred CCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEe-CCCeEEEEEcCC----ceeeeec---ccceeEEEEeCC
Q psy17243 47 DNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSD-KAGVIAVWVADN----AQLLYSA---LGPSKCLTVTHN 118 (392)
Q Consensus 47 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~----~~~~~~~---~~~~~~~~~~~~ 118 (392)
.+.|+..+++..+....+.. ...+..++|.+.+..|+.+. ..+.|+.+++.. ....... ......+++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 45788888877665544443 34567899998777777664 457899999875 2221111 123456788754
Q ss_pred CCEE-EEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC--CCcEEEEEcCCCeEEEEEecCCC
Q psy17243 119 MKYI-VSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR--DMSLKVWQVVGGKLAQVLVGHTD 195 (392)
Q Consensus 119 ~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~ 195 (392)
+..| ++-...+.|.++++.... ...+..........+++.|.+.+|+.... .+.|..+++........+...-.
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~---~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~ 540 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVK---RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ 540 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCC---EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS
T ss_pred CCcEEEEeccCCeEEEEecCCCc---eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC
Confidence 4444 444557889999886321 11111122244577889987666655543 26788887753322222222234
Q ss_pred ceeEEEEecCCCcEEEEecCCCeEEEEECCCC
Q psy17243 196 HVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 196 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
..+.|+++|.++.++++-...+.|.++++...
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 46789999777888888778889999998743
No 301
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.86 E-value=0.005 Score=51.63 Aligned_cols=214 Identities=12% Similarity=0.103 Sum_probs=106.4
Q ss_pred CeEEEEECCCcccee--eeccCCcCeeEEEecCCCCeEEEEeCC-----CeEEEEeCCCCceeEE--ecccccceEEEEE
Q psy17243 6 CLVNVWQMNSHELQS--TMEGHLNTVSCVAISPNSIFAVSGSED-----NTAKVWGLTLGSVVST--FKSHQSTILAVAV 76 (392)
Q Consensus 6 g~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~ 76 (392)
..+.+||+.+.+-.. .+......- +++. -++.+++.|+.+ ..+.+||..+.+-... +...... .+++.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~ 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRA-GMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAV 106 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccc-eEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEE
Confidence 357788877654222 121111111 2222 256677777654 3588899887654322 2211111 12222
Q ss_pred ecCCCEEEEEeCCC-----eEEEEEcCCceeeee--cccce-eEEEEeCCCCEEEEecCC-------CcEEEEeCCCCCC
Q psy17243 77 LSDSRRVVTSDKAG-----VIAVWVADNAQLLYS--ALGPS-KCLTVTHNMKYIVSGDGD-------NSLRIWPTSPQTH 141 (392)
Q Consensus 77 ~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~ 141 (392)
-+++.++.|+.++ .+.+||+.+.+-... ...+. ...+...+++.++.|+.+ ..+.+||+.+...
T Consensus 107 -~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 107 -LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp -ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred -ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 2566777776553 577888887654322 11111 111222356666666542 4588899875433
Q ss_pred CCcceeeeccccceEEEEEEcCCCEEEEeeCC-----CcEEEEEcCCCeEEEEEecCCCc-eeEEEEecCCCcEEEEecC
Q psy17243 142 KDDERFTVSHSEEITCFTVTWDSQYLITGSRD-----MSLKVWQVVGGKLAQVLVGHTDH-VSCVAVAVTNKSLVVSGSK 215 (392)
Q Consensus 142 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~ 215 (392)
....... ....-.+++. -++++++.|+.+ ..+.+||+.+.+-...-...... -..++. .++.+++.|+.
T Consensus 186 ~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~ 260 (302)
T 2xn4_A 186 TYIAEMS--TRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGD 260 (302)
T ss_dssp EEECCCS--SCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCB
T ss_pred EECCCCc--cccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCc
Confidence 2211111 1111112222 256777777654 46899999887544321111111 112222 25667777765
Q ss_pred CC-----eEEEEECCCCc
Q psy17243 216 DS-----NLIVWDMETGG 228 (392)
Q Consensus 216 dg-----~i~iwd~~~~~ 228 (392)
++ .+.+||+.+.+
T Consensus 261 ~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 261 DGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCcccccEEEEcCCCCe
Confidence 53 47788877654
No 302
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.85 E-value=0.0034 Score=52.75 Aligned_cols=213 Identities=10% Similarity=0.108 Sum_probs=109.0
Q ss_pred CeEEEEECCCccce--eeeccCCcCeeEEEecCCCCeEEEEeCC----CeEEEEeCCCCceeEE--ecccccceEEEEEe
Q psy17243 6 CLVNVWQMNSHELQ--STMEGHLNTVSCVAISPNSIFAVSGSED----NTAKVWGLTLGSVVST--FKSHQSTILAVAVL 77 (392)
Q Consensus 6 g~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~~~~~d----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~ 77 (392)
..+.+||..+.+-. ..+......-.++. -++.+++.|+.+ ..+.+||..+.+-... +.........+.
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-- 99 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA-- 99 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--
Confidence 56788888765422 22221111222222 256677777754 6788999888754332 221111112222
Q ss_pred cCCCEEEEEeCC------CeEEEEEcCCceeeee--cccc-eeEEEEeCCCCEEEEecC---------CCcEEEEeCCCC
Q psy17243 78 SDSRRVVTSDKA------GVIAVWVADNAQLLYS--ALGP-SKCLTVTHNMKYIVSGDG---------DNSLRIWPTSPQ 139 (392)
Q Consensus 78 ~~~~~l~~~~~d------~~i~iwd~~~~~~~~~--~~~~-~~~~~~~~~~~~l~~~~~---------d~~i~~~d~~~~ 139 (392)
-+++.++.|+.+ ..+.+||+.+.+-... ...+ ....+...+++.++.|+. -..+.+||+.+.
T Consensus 100 ~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 100 AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 256666777654 4688999988754322 1111 111122235666666653 345889998754
Q ss_pred CCCCcceeeeccccceEEEEEEcCCCEEEEeeCC-----CcEEEEEcCCCeEEEE--EecCCCceeEEEEecCCCcEEEE
Q psy17243 140 THKDDERFTVSHSEEITCFTVTWDSQYLITGSRD-----MSLKVWQVVGGKLAQV--LVGHTDHVSCVAVAVTNKSLVVS 212 (392)
Q Consensus 140 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~ 212 (392)
........ .....-.++... ++++++.|+.+ ..+.+||+.+.+-... +........ ++.. ++.+++.
T Consensus 180 ~W~~~~~~--p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~--~~~i~v~ 253 (306)
T 3ii7_A 180 TWTELCPM--IEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVK-CAAV--GSIVYVL 253 (306)
T ss_dssp EEEEECCC--SSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCE-EEEE--TTEEEEE
T ss_pred eEEECCCc--cchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcccee-EEEE--CCEEEEE
Confidence 32222111 111111122222 56677777643 4689999988753322 111111122 2222 5667777
Q ss_pred ecCC-----CeEEEEECCCCc
Q psy17243 213 GSKD-----SNLIVWDMETGG 228 (392)
Q Consensus 213 ~~~d-----g~i~iwd~~~~~ 228 (392)
|+.+ ..+.+||+.+.+
T Consensus 254 GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 254 AGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp ECBCSSSBCCEEEEEETTTTE
T ss_pred eCcCCCeeeeeEEEEcCCCCe
Confidence 7744 457888887654
No 303
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.83 E-value=0.0095 Score=49.52 Aligned_cols=221 Identities=7% Similarity=0.078 Sum_probs=134.8
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCC-CceeEEecccc----cceEEEEEecC
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTL-GSVVSTFKSHQ----STILAVAVLSD 79 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~----~~v~~~~~~~~ 79 (392)
..++.|+|+++.+.++.+. ....|.--.|-.+.. |+-.+ +..|+-|+++. ..+.+.+..|. ..|.....+++
T Consensus 86 g~~LQiFnletK~klks~~-~~e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~ 162 (365)
T 2xzh_A 86 GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK 162 (365)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTT
T ss_pred CCeEEEechHHhhhhccee-cCCccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCC
Confidence 3578889988888877776 345677777766544 33332 45799999874 35555555443 45777777888
Q ss_pred CCEEEEEeC-------CCeEEEEEcCCceeeeecccceeEEE-EeCCC-----CEEEEecC---CCcEEEEeCCCCC-CC
Q psy17243 80 SRRVVTSDK-------AGVIAVWVADNAQLLYSALGPSKCLT-VTHNM-----KYIVSGDG---DNSLRIWPTSPQT-HK 142 (392)
Q Consensus 80 ~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~-----~~l~~~~~---d~~i~~~d~~~~~-~~ 142 (392)
.+.++..+- .|.+.+|..+.+.. +.++++..+.. +-.++ ..++.+.. .+++++.++.... ..
T Consensus 163 ~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~ 241 (365)
T 2xzh_A 163 QKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN 241 (365)
T ss_dssp SCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC
T ss_pred CCEEEEEeEeccCCccceeEEEEeeccccc-ceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC
Confidence 887665432 36788888776532 22333333321 11111 13333322 2689999885431 11
Q ss_pred Ccc-----eeee---ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEec
Q psy17243 143 DDE-----RFTV---SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 143 ~~~-----~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 214 (392)
... .... ...+-..++..++.-..++.-+.-|.|++||++++.++..-+-....|...+.....+.+ ++..
T Consensus 242 ~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi-~~Vn 320 (365)
T 2xzh_A 242 QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGI-IGVN 320 (365)
T ss_dssp CCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEE-EEEE
T ss_pred CCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcE-EEEc
Confidence 111 1111 123445678888888899999999999999999999998776666666655554333333 3344
Q ss_pred CCCeEEEEECCCCcee
Q psy17243 215 KDSNLIVWDMETGGEE 230 (392)
Q Consensus 215 ~dg~i~iwd~~~~~~~ 230 (392)
..|.|.--.++..+.+
T Consensus 321 r~GqVl~v~v~~~~iv 336 (365)
T 2xzh_A 321 RKGQVLSVCVEEENII 336 (365)
T ss_dssp TTCEEEEEEECTTTHH
T ss_pred CCCEEEEEEECcccEe
Confidence 6777766666655443
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.64 E-value=0.02 Score=47.64 Aligned_cols=225 Identities=11% Similarity=0.123 Sum_probs=132.9
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEE
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVV 84 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 84 (392)
+..|.|.|+.++.....-. -.--+.-.+|..+.||.=. ..++.|+|+++.+.++.+.- ...|.-=.|..+. .|+
T Consensus 48 ~~~VvIiDl~n~~~~~Rrp---i~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~ 121 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVA 121 (365)
T ss_dssp EEEEEEEETTSTTSCEEEE---CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEE
T ss_pred CCEEEEEECCCCCCccccc---cccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEE
Confidence 3467888887655432211 1112344588888777665 67899999999999988874 5677777887554 444
Q ss_pred EEeCCCeEEEEEcCCc-ee--eeec-----ccceeEEEEeCCCCEEEEecC-------CCcEEEEeCCCCCCCCcceeee
Q psy17243 85 TSDKAGVIAVWVADNA-QL--LYSA-----LGPSKCLTVTHNMKYIVSGDG-------DNSLRIWPTSPQTHKDDERFTV 149 (392)
Q Consensus 85 ~~~~d~~i~iwd~~~~-~~--~~~~-----~~~~~~~~~~~~~~~l~~~~~-------d~~i~~~d~~~~~~~~~~~~~~ 149 (392)
..+ +..|+-|+++.. .+ +... ...+-....+++.++++..+- .|.+.+|..+. .......
T Consensus 122 lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----~~sQ~ie 196 (365)
T 2xzh_A 122 LVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----KVSQPIE 196 (365)
T ss_dssp EEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT----TEEEEEC
T ss_pred EEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc----cccceee
Confidence 443 456999999753 22 2211 123445667788887766442 36788998752 2222333
Q ss_pred ccccceEEEEEEc--CC-CEEEEeeC---CCcEEEEEcCCC---e------EEEEEec---CCCceeEEEEecCCCcEEE
Q psy17243 150 SHSEEITCFTVTW--DS-QYLITGSR---DMSLKVWQVVGG---K------LAQVLVG---HTDHVSCVAVAVTNKSLVV 211 (392)
Q Consensus 150 ~~~~~v~~~~~~~--~~-~~l~~~~~---dg~i~i~d~~~~---~------~~~~~~~---~~~~v~~~~~~~~~~~~l~ 211 (392)
+|...-..+.+.. .. ++++.+.. .+.++|.++... . .+..+.. -.+-.-++..+ +.-.++.
T Consensus 197 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs-~kygviy 275 (365)
T 2xzh_A 197 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVF 275 (365)
T ss_dssp CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEE-TTTTEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEec-ccCCEEE
Confidence 4433322222211 11 12232222 268899888432 1 1111111 13344567788 5556777
Q ss_pred EecCCCeEEEEECCCCceeeeeccccccee
Q psy17243 212 SGSKDSNLIVWDMETGGEEHFLAGHLGCVT 241 (392)
Q Consensus 212 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 241 (392)
.-+.-|.|++||++++.++..-+-....|.
T Consensus 276 viTK~G~ihlyDleTgt~i~~nrIS~d~iF 305 (365)
T 2xzh_A 276 LITKYGYIHLYDLETGTCIYMNRISGETIF 305 (365)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEeCCcEEEEEEcccCcEEEEeccCCCceE
Confidence 778899999999999999876554444444
No 305
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.62 E-value=0.011 Score=49.70 Aligned_cols=214 Identities=11% Similarity=0.088 Sum_probs=106.2
Q ss_pred CeEEEEECCCcccee--eeccCCcCeeEEEecCCCCeEEEEeC----C-----CeEEEEeCCCCceeEE--ecccccceE
Q psy17243 6 CLVNVWQMNSHELQS--TMEGHLNTVSCVAISPNSIFAVSGSE----D-----NTAKVWGLTLGSVVST--FKSHQSTIL 72 (392)
Q Consensus 6 g~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~~~~~----d-----g~v~iwd~~~~~~~~~--~~~~~~~v~ 72 (392)
..+.+||..+.+-.. .+......- +++. .++.+++.|+. + ..+.+||..+.+-... +........
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 467888887654322 121111111 2222 25666677665 2 4688899887653322 211111112
Q ss_pred EEEEecCCCEEEEEeCC-----CeEEEEEcCCceeeeec--ccce-eEEEEeCCCCEEEEecCC-----CcEEEEeCCCC
Q psy17243 73 AVAVLSDSRRVVTSDKA-----GVIAVWVADNAQLLYSA--LGPS-KCLTVTHNMKYIVSGDGD-----NSLRIWPTSPQ 139 (392)
Q Consensus 73 ~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~--~~~~-~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~ 139 (392)
.+.+ +++.++.|+.+ ..+.+||+.+.+-.... ..+. ...+...++..++.|+.+ ..+.+||+.+.
T Consensus 117 ~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 117 VGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp EEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 2222 56666666533 46888998877543221 1111 111122266677777654 46888998754
Q ss_pred CCCCcceeeeccccceEEEEEEcCCCEEEEeeCC-----CcEEEEEcCCCeEEEEEecCCC-ceeEEEEecCCCcEEEEe
Q psy17243 140 THKDDERFTVSHSEEITCFTVTWDSQYLITGSRD-----MSLKVWQVVGGKLAQVLVGHTD-HVSCVAVAVTNKSLVVSG 213 (392)
Q Consensus 140 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~ 213 (392)
.......... .... .+++.. ++++++.|+.+ ..+.+||+.+.+-...-..... .-.+++.. ++.+++.|
T Consensus 195 ~W~~~~~~p~-~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 269 (308)
T 1zgk_A 195 EWRMITAMNT-IRSG-AGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLG 269 (308)
T ss_dssp EEEECCCCSS-CCBS-CEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred eEeeCCCCCC-cccc-ceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEc
Confidence 3322211111 1111 122222 66777777654 5699999988754332111111 11122232 56677777
Q ss_pred cCC-----CeEEEEECCCCc
Q psy17243 214 SKD-----SNLIVWDMETGG 228 (392)
Q Consensus 214 ~~d-----g~i~iwd~~~~~ 228 (392)
+.+ ..+.+||+.+.+
T Consensus 270 G~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 270 GYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBCSSCBCCEEEEEETTTTE
T ss_pred CcCCCcccceEEEEcCCCCE
Confidence 644 347777777654
No 306
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.61 E-value=0.029 Score=48.67 Aligned_cols=221 Identities=7% Similarity=0.075 Sum_probs=134.8
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCC-CceeEEecccc----cceEEEEEecC
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTL-GSVVSTFKSHQ----STILAVAVLSD 79 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~----~~v~~~~~~~~ 79 (392)
..++.|+|+++.+.++.+.- ...|.--.|-.+.. |+-.+ +..|+-|+++. ..+.+.+..|. ..|.....+++
T Consensus 85 g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~~-l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~ 161 (494)
T 1bpo_A 85 GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK 161 (494)
T ss_dssp TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETTE-EEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTT
T ss_pred CCeEEEEchHHhhhhcceec-CCCceEEEecCCCe-EEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCC
Confidence 35788888888777777763 44566667765543 44332 56799999864 34555565443 45777778888
Q ss_pred CCEEEEEeC-------CCeEEEEEcCCceeeeecccceeEEE-EeCCC-----CEEEEecC---CCcEEEEeCCCCC-CC
Q psy17243 80 SRRVVTSDK-------AGVIAVWVADNAQLLYSALGPSKCLT-VTHNM-----KYIVSGDG---DNSLRIWPTSPQT-HK 142 (392)
Q Consensus 80 ~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~-----~~l~~~~~---d~~i~~~d~~~~~-~~ 142 (392)
.+.++..+- .|.+.+|..+.+.. +.+.++..+.. +-.++ ..++.+.. .+++++.++.... ..
T Consensus 162 ~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~ 240 (494)
T 1bpo_A 162 QKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN 240 (494)
T ss_dssp SSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC
T ss_pred CCeEEEEeecccCCcccceEEEeecccccc-chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC
Confidence 887764432 36788888776532 22233332221 11111 23333333 3789999986431 11
Q ss_pred Ccc-----eeee---ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEec
Q psy17243 143 DDE-----RFTV---SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGS 214 (392)
Q Consensus 143 ~~~-----~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 214 (392)
... .... ...+-..++..++.-..++.-+.-|.|++||+.++.++..-+-...+|...+.....+.+ ++..
T Consensus 241 ~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi-~~Vn 319 (494)
T 1bpo_A 241 QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGI-IGVN 319 (494)
T ss_dssp CCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEE-EEEE
T ss_pred CCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcE-EEEc
Confidence 111 1111 123445678889888899999999999999999999988776666666655555333433 3444
Q ss_pred CCCeEEEEECCCCcee
Q psy17243 215 KDSNLIVWDMETGGEE 230 (392)
Q Consensus 215 ~dg~i~iwd~~~~~~~ 230 (392)
..|.|.--.++....+
T Consensus 320 r~GqVl~v~v~e~~iv 335 (494)
T 1bpo_A 320 RKGQVLSVCVEEENII 335 (494)
T ss_dssp TTCEEEEEEECTTTHH
T ss_pred cCceEEEEEEccccch
Confidence 6777766666655444
No 307
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.59 E-value=0.027 Score=47.84 Aligned_cols=216 Identities=7% Similarity=-0.032 Sum_probs=118.7
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec----ccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCce
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK----SHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQ 101 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 101 (392)
...+.++.|.+++..+++ +..|.| +...+.++.-.... .....+.++.|.+ + .++.++..+.|.. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEE-ECCCCC
Confidence 457899999877776664 456765 33334443322221 1244688999976 3 4444556665443 333333
Q ss_pred eeee------cccceeEEEEeCCCCEEEEecCCCcEEE-EeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCC
Q psy17243 102 LLYS------ALGPSKCLTVTHNMKYIVSGDGDNSLRI-WPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDM 174 (392)
Q Consensus 102 ~~~~------~~~~~~~~~~~~~~~~l~~~~~d~~i~~-~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 174 (392)
.-.. +......+.+.+++..++++ .++.|.. .|- +..-.. ........+..+.+.+++.+++++. +|
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~Dg--G~tW~~--~~~~~~~~~~~~~~~~~~~~~~~g~-~G 183 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDS--GKNWQA--LVQEAIGVMRNLNRSPSGEYVAVSS-RG 183 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESST--TSSEEE--EECSCCCCEEEEEECTTSCEEEEET-TS
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCC--CCCCEE--eecCCCcceEEEEEcCCCcEEEEEC-CC
Confidence 2221 12345566666666666555 4554432 221 111111 1123345688899999888777665 44
Q ss_pred cEEE-EEc--CCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc----cccceeEEEEcC
Q psy17243 175 SLKV-WQV--VGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG----HLGCVTCVKLAG 247 (392)
Q Consensus 175 ~i~i-~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~ 247 (392)
.+.. .|- .+.+.+. ......+..+.+. +++.+++ ++.+|.+++.+.+.++.-..+.. ....+..+.+.+
T Consensus 184 ~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~-~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~ 259 (327)
T 2xbg_A 184 SFYSTWEPGQTAWEPHN--RTTSRRLHNMGFT-PDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT 259 (327)
T ss_dssp SEEEEECTTCSSCEEEE--CCSSSCEEEEEEC-TTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS
T ss_pred cEEEEeCCCCCceeECC--CCCCCccceeEEC-CCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC
Confidence 4443 332 2223332 2345678888888 4555554 44678888775333433222221 223588899999
Q ss_pred CCeEEEEcC
Q psy17243 248 DGTVAMSDL 256 (392)
Q Consensus 248 dg~~~~~~~ 256 (392)
++.+++.+.
T Consensus 260 ~~~~~~~g~ 268 (327)
T 2xbg_A 260 PNEVWLAGG 268 (327)
T ss_dssp SSCEEEEES
T ss_pred CCEEEEEeC
Confidence 888888754
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.58 E-value=0.016 Score=48.43 Aligned_cols=211 Identities=14% Similarity=0.058 Sum_probs=105.8
Q ss_pred CCCeEEEEe-CC-----CeEEEEeCCCCceeEE--ecccccceEEEEEecCCCEEEEEeCC-----CeEEEEEcCCce--
Q psy17243 37 NSIFAVSGS-ED-----NTAKVWGLTLGSVVST--FKSHQSTILAVAVLSDSRRVVTSDKA-----GVIAVWVADNAQ-- 101 (392)
Q Consensus 37 ~~~~l~~~~-~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~-- 101 (392)
++.+++.|+ .+ ..+.+||..+.+-... +...... .+++ ..+++.++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRY-VASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBS-CEEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhcc-ccEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 445666666 32 4688999887653321 2111111 1222 2356666777654 468999988766
Q ss_pred -eee--ecccce-eEEEEeCCCCEEEEecCC-----CcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC
Q psy17243 102 -LLY--SALGPS-KCLTVTHNMKYIVSGDGD-----NSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR 172 (392)
Q Consensus 102 -~~~--~~~~~~-~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 172 (392)
-.. ....+. ...+...++..++.|+.+ ..+.+||+.+.......... ....-.+++. .++++++.|+.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~ 168 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ--TAREGAGLVV-ASGVIYCLGGY 168 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS--SCCBSCEEEE-ETTEEEEECCB
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCC--CCcccceEEE-ECCEEEEECCC
Confidence 222 111111 111222356677777643 36888988754332221111 1111112222 26677777765
Q ss_pred C-----CcEEEEEcCCCeEEEEEecCCCc-eeEEEEecCCCcEEEEecCC-----CeEEEEECCCCceee--eecccccc
Q psy17243 173 D-----MSLKVWQVVGGKLAQVLVGHTDH-VSCVAVAVTNKSLVVSGSKD-----SNLIVWDMETGGEEH--FLAGHLGC 239 (392)
Q Consensus 173 d-----g~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~--~~~~~~~~ 239 (392)
+ ..+.+||+.+.+-...-...... -.+++. .++.+++.|+.+ ..+.+||+.+.+-.. .+......
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 4 46899999887644331111111 112222 256777777754 468999998765332 22211111
Q ss_pred eeEEEEcCCCeEEEEcC
Q psy17243 240 VTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 240 v~~~~~~~dg~~~~~~~ 256 (392)
...+. -++++++.+.
T Consensus 247 ~~~~~--~~~~i~v~GG 261 (301)
T 2vpj_A 247 VGATV--LRGRLYAIAG 261 (301)
T ss_dssp CEEEE--ETTEEEEECC
T ss_pred eeEEE--ECCEEEEEcC
Confidence 12222 2677777764
No 309
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.56 E-value=0.029 Score=47.60 Aligned_cols=219 Identities=11% Similarity=0.039 Sum_probs=118.4
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec---ccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCcee
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK---SHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQL 102 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 102 (392)
...+.++.+.+ +..++ ++..+.|.. ..+.|+.-..+. .+...+..+.+.+++..++.+ .++.|.. ..+.++.
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~t 153 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKN 153 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSS
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCC
Confidence 44688999986 44444 455665543 333344333322 233457788887776655544 4554432 1222322
Q ss_pred ---ee-ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEE
Q psy17243 103 ---LY-SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKV 178 (392)
Q Consensus 103 ---~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 178 (392)
+. .....+..+.+.+++.+++++...+..+-.|-. +..-... .......+..+.+.++++.++ .+.+|.+++
T Consensus 154 W~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~--~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~ 229 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPH--NRTTSRRLHNMGFTPDGRLWM-IVNGGKIAF 229 (327)
T ss_dssp EEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEE--ECCSSSCEEEEEECTTSCEEE-EETTTEEEE
T ss_pred CEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeEC--CCCCCCccceeEECCCCCEEE-EeCCceEEE
Confidence 11 122356678888888877776544333333321 1111111 123456788888988887554 455787777
Q ss_pred EEcCCCeEEEEEe-c---CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeec---ccccceeEEEEcCCCeE
Q psy17243 179 WQVVGGKLAQVLV-G---HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLA---GHLGCVTCVKLAGDGTV 251 (392)
Q Consensus 179 ~d~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~~dg~~ 251 (392)
.+...++.-..+. . +...+..+.+. +++.+++++. +|.| ++..+.++.-..+. .....+..+.|.+++++
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~-~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~ 306 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYR-TPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQG 306 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEES-SSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEE
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEec-CCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCce
Confidence 6422233222221 1 22357888888 4566666554 6766 44455454333333 22456788888877877
Q ss_pred EEEcC
Q psy17243 252 AMSDL 256 (392)
Q Consensus 252 ~~~~~ 256 (392)
++.+.
T Consensus 307 ~~~G~ 311 (327)
T 2xbg_A 307 FILGQ 311 (327)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 77653
No 310
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.54 E-value=0.025 Score=47.70 Aligned_cols=216 Identities=10% Similarity=0.050 Sum_probs=106.9
Q ss_pred CeEEEEECCCcccee-eeccCCcCeeEEEecCCCCeEEEEeC----C-------CeEEEEeCCCCceeEEecccccc--e
Q psy17243 6 CLVNVWQMNSHELQS-TMEGHLNTVSCVAISPNSIFAVSGSE----D-------NTAKVWGLTLGSVVSTFKSHQST--I 71 (392)
Q Consensus 6 g~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~----d-------g~v~iwd~~~~~~~~~~~~~~~~--v 71 (392)
..+.+||..+.+-.. .+..............++.+++.|+. + ..+.+||..+.+-.. +.....+ -
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CCCBSSCEES
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CCCCCcchhc
Confidence 468889988765332 22211122233333446777777773 1 127788888765422 2111111 1
Q ss_pred EEEEEecCCCEEEEEeCC--------CeEEEEEcCCceeeee--cccce-eEEEEeCCCCEEEEecC------CCcEEEE
Q psy17243 72 LAVAVLSDSRRVVTSDKA--------GVIAVWVADNAQLLYS--ALGPS-KCLTVTHNMKYIVSGDG------DNSLRIW 134 (392)
Q Consensus 72 ~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~~------d~~i~~~ 134 (392)
.+++.. +++.++.|+.+ ..+.+||+.+.+-... ...+. ...+...+++.++.|+. -..+.+|
T Consensus 92 ~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y 170 (315)
T 4asc_A 92 FGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVY 170 (315)
T ss_dssp CEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEE
T ss_pred eeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEE
Confidence 122222 55566666632 4588999988753322 11111 12222346667777765 2468899
Q ss_pred eCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCC-----cEEEEEcCCCeEEEEEecCCCc-eeEEEEecCCCc
Q psy17243 135 PTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDM-----SLKVWQVVGGKLAQVLVGHTDH-VSCVAVAVTNKS 208 (392)
Q Consensus 135 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~ 208 (392)
|+.+.......... ....-.+++. -++++++.|+.++ .+.+||+.+.+-...-...... -.+++.. ++.
T Consensus 171 d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 245 (315)
T 4asc_A 171 DPKKFEWKELAPMQ--TARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGT 245 (315)
T ss_dssp ETTTTEEEECCCCS--SCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE
T ss_pred eCCCCeEEECCCCC--CchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCE
Confidence 98754332221111 1111112222 2667777777544 5889999887544332111111 1122222 456
Q ss_pred EEEEecCCC--------------eEEEEECCCCc
Q psy17243 209 LVVSGSKDS--------------NLIVWDMETGG 228 (392)
Q Consensus 209 ~l~~~~~dg--------------~i~iwd~~~~~ 228 (392)
+++.|+.++ .+.+||+.+.+
T Consensus 246 l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 246 LYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 666666532 35667766543
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.47 E-value=0.016 Score=50.20 Aligned_cols=142 Identities=14% Similarity=0.082 Sum_probs=94.6
Q ss_pred cCCCCeEEEEeCCCeEEEEeCCCCceeEEeccc----ccceEEEEEecCCCEEEEEeCCCeEEEEEcCCcee--------
Q psy17243 35 SPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSH----QSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQL-------- 102 (392)
Q Consensus 35 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-------- 102 (392)
+.++..++.+ .++.||.-++......+.++.. -..|..+..+|+|++|+..+. ..|.|-.+..+..
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc
Confidence 4456656655 3578888888755555555532 236888999999999988864 4688877763210
Q ss_pred ----e--ee-------cccceeEEEEeC---CCCEEEEecCCCcEEEEeCCCCCCCCcceee--------eccccceEEE
Q psy17243 103 ----L--YS-------ALGPSKCLTVTH---NMKYIVSGDGDNSLRIWPTSPQTHKDDERFT--------VSHSEEITCF 158 (392)
Q Consensus 103 ----~--~~-------~~~~~~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--------~~~~~~v~~~ 158 (392)
. .. ...++..+.|+| .+..|++-..|+.|++||+........ ... ......|.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 0 11 124678899999 456899999999999999986322211 110 1123678899
Q ss_pred EEEcCCCEEEEee--CCCcEEEE
Q psy17243 159 TVTWDSQYLITGS--RDMSLKVW 179 (392)
Q Consensus 159 ~~~~~~~~l~~~~--~dg~i~i~ 179 (392)
+|..++-.|+..+ .+|.|+-.
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCEEEE
Confidence 9999876666644 77877654
No 312
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.47 E-value=0.071 Score=49.67 Aligned_cols=203 Identities=12% Similarity=0.018 Sum_probs=127.1
Q ss_pred cCeeEEEecCCCCeEEEE-eCCCeEEEEeCCCCceeEEecc------cccceEEEEEecCCCEEE-EEeCCCeEEEEEcC
Q psy17243 27 NTVSCVAISPNSIFAVSG-SEDNTAKVWGLTLGSVVSTFKS------HQSTILAVAVLSDSRRVV-TSDKAGVIAVWVAD 98 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~ 98 (392)
..+.+++|.+....|+-+ ...+.|+.++.+.......+.. ....+..+++...+..|+ +-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 457889999865555544 4567888888764433333322 234678999998876665 54567889999886
Q ss_pred Ccee--e-eecccceeEEEEeCCCCEEEEecC-CC--cEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC
Q psy17243 99 NAQL--L-YSALGPSKCLTVTHNMKYIVSGDG-DN--SLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR 172 (392)
Q Consensus 99 ~~~~--~-~~~~~~~~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 172 (392)
.... + .........+++.|...+|+.... .. .|...++... ....+....-...+.+++.++.+.|+.+..
T Consensus 420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~---~~~~l~~~~l~~P~gla~D~~~~~LYw~D~ 496 (628)
T 4a0p_A 420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT---EREVLFFSGLSKPIALALDSRLGKLFWADS 496 (628)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC---SCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC---CcEEEEeccCCCccEEEEeCCCCEEEEEeC
Confidence 5422 1 122345789999995545544433 22 5666666522 122222223446789999998777776654
Q ss_pred -CCcEEEEEcCCCeEEEEEe-cCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeecc
Q psy17243 173 -DMSLKVWQVVGGKLAQVLV-GHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAG 235 (392)
Q Consensus 173 -dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 235 (392)
.+.|..+++.. ...+.+. ........++.. ++.++++-...+.|...|..+++....+..
T Consensus 497 ~~~~I~~~~~dG-~~r~~~~~~~~~~P~glav~--~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~ 558 (628)
T 4a0p_A 497 DLRRIESSDLSG-ANRIVLEDSNILQPVGLTVF--ENWLYWIDKQQQMIEKIDMTGREGRTKVQA 558 (628)
T ss_dssp TTTEEEEEETTS-CSCEEEECSSCSCEEEEEEE--TTEEEEEETTTTEEEEEETTSSSCCEEEEC
T ss_pred CCCEEEEEeCCC-CceEEEEcCCCCCcEEEEEE--CCEEEEEECCCCeEEEEECcCCCCcEEEec
Confidence 57899999854 3334443 333455677776 467777777788899999888876655543
No 313
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.0033 Score=53.19 Aligned_cols=184 Identities=13% Similarity=0.047 Sum_probs=103.0
Q ss_pred CccCCeEEEEECCCccceeeeccC-CcCeeEEEec--C-CCCeEEEE-eCCCeEEEEeCCCCceeEEeccc----ccceE
Q psy17243 2 GGMDCLVNVWQMNSHELQSTMEGH-LNTVSCVAIS--P-NSIFAVSG-SEDNTAKVWGLTLGSVVSTFKSH----QSTIL 72 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~--~-~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~----~~~v~ 72 (392)
|+.||.|.-.|.++|+.+.+++.. ..++....-. + ++..++.. +.||.|..++.++|.....+... ..++.
T Consensus 16 ~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~ 95 (339)
T 2be1_A 16 ADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLH 95 (339)
T ss_dssp EETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEE
T ss_pred EeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccc
Confidence 678999999999999999988753 1233221111 1 22333333 58999999999888554433311 11222
Q ss_pred E---EEE-----ecCCCEEEEEeCCCeEEEEEcCCceeeeeccccee----------EEEEe-----CCCCEEEEecCCC
Q psy17243 73 A---VAV-----LSDSRRVVTSDKAGVIAVWVADNAQLLYSALGPSK----------CLTVT-----HNMKYIVSGDGDN 129 (392)
Q Consensus 73 ~---~~~-----~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----------~~~~~-----~~~~~l~~~~~d~ 129 (392)
. ... ...+..+++++.+|.+...|+.+|+.+..+..... |.... ..+..++.+..+.
T Consensus 96 ~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y 175 (339)
T 2be1_A 96 LKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIF 175 (339)
T ss_dssp EECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEE
T ss_pred cCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceE
Confidence 1 000 01456889999999999999999999887654211 22111 1235677776666
Q ss_pred cEEEEeCCCCCCCCcceeeeccccceE-----EEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEE
Q psy17243 130 SLRIWPTSPQTHKDDERFTVSHSEEIT-----CFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQ 188 (392)
Q Consensus 130 ~i~~~d~~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 188 (392)
.+.+.+ +++. .-...+..-....+. +...+.|+.+ +.++.||.|.-+|..+++.+.
T Consensus 176 ~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 176 ELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp ECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 666665 2221 111110000000000 0001123555 557889999999998888764
No 314
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.40 E-value=0.032 Score=47.91 Aligned_cols=193 Identities=12% Similarity=0.063 Sum_probs=92.9
Q ss_pred CCCeEEEEeC-C---------CeEEEEeCCCCceeEEeccc-ccceEEEEEecCCCEEEEEeCC----------------
Q psy17243 37 NSIFAVSGSE-D---------NTAKVWGLTLGSVVSTFKSH-QSTILAVAVLSDSRRVVTSDKA---------------- 89 (392)
Q Consensus 37 ~~~~l~~~~~-d---------g~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------------- 89 (392)
++++++.|+. + ..+.+||+.+.+-...-... .......+...+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 144 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGK 144 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCC
Confidence 5666677765 2 46889998876543221111 1111111222467777777754
Q ss_pred -----------------------CeEEEEEcCCceeee--ecccce-e-EEEEeCCCCEEEEecC------CCcEEEEeC
Q psy17243 90 -----------------------GVIAVWVADNAQLLY--SALGPS-K-CLTVTHNMKYIVSGDG------DNSLRIWPT 136 (392)
Q Consensus 90 -----------------------~~i~iwd~~~~~~~~--~~~~~~-~-~~~~~~~~~~l~~~~~------d~~i~~~d~ 136 (392)
..+.+||+.+.+-.. ....+. . ..+...++..++.|+. ...+.+||+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 145 DSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred cccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 578999998775432 222111 1 1222235666666653 345777876
Q ss_pred --CCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCC----------------------CcEEEEEcCCCeEE--EEE
Q psy17243 137 --SPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRD----------------------MSLKVWQVVGGKLA--QVL 190 (392)
Q Consensus 137 --~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------------g~i~i~d~~~~~~~--~~~ 190 (392)
.+.......... .........+...++++++.|+.+ ..+.+||+.+.+-. ..+
T Consensus 225 d~~~~~W~~~~~~~-~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 303 (357)
T 2uvk_A 225 TGNNLKWNKLAPVS-SPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL 303 (357)
T ss_dssp C---CEEEECCCSS-TTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC
T ss_pred cCCCCcEEecCCCC-CCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC
Confidence 322211111110 011111111223356677777632 25788998876432 222
Q ss_pred ecCCCceeEEEEecCCCcEEEEecCCC------eEEEEECCCCceeeee
Q psy17243 191 VGHTDHVSCVAVAVTNKSLVVSGSKDS------NLIVWDMETGGEEHFL 233 (392)
Q Consensus 191 ~~~~~~v~~~~~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~ 233 (392)
........++. .++.+++.|+.++ .|.++++++++.+...
T Consensus 304 p~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 304 SQGRAYGVSLP---WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp SSCCBSSEEEE---ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred CCCcccceeEE---eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 22111112222 3567777777542 3666788887766543
No 315
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.39 E-value=0.068 Score=53.50 Aligned_cols=174 Identities=10% Similarity=0.125 Sum_probs=109.4
Q ss_pred CeEEEEECCCccceeeecc-CCcCeeEEEe---cCC-CCeEEEEe----------CCCeEEEEeCCCCceeEEec-cccc
Q psy17243 6 CLVNVWQMNSHELQSTMEG-HLNTVSCVAI---SPN-SIFAVSGS----------EDNTAKVWGLTLGSVVSTFK-SHQS 69 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~~~-h~~~v~~~~~---~~~-~~~l~~~~----------~dg~v~iwd~~~~~~~~~~~-~~~~ 69 (392)
+.|++.|..+++.+..++- ....+.+++. ..+ ..+|+.|. ..|.|.+|++..++.....+ ..++
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 4688999888887765542 2334555553 322 46888775 34889999987543322211 2467
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeee-c--ccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcce
Q psy17243 70 TILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYS-A--LGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDER 146 (392)
Q Consensus 70 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~--~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 146 (392)
+|++++-. +| +|+++- ...+++|++...+.+.. . ...+..+.....++++++|..-..+.++..+.....-...
T Consensus 887 ~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~ 963 (1158)
T 3ei3_A 887 AVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 963 (1158)
T ss_dssp CEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEE
T ss_pred cCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEE
Confidence 88888765 35 444443 57899999987765441 1 1112233344467899999988888887654332222222
Q ss_pred eeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCC
Q psy17243 147 FTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVG 183 (392)
Q Consensus 147 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 183 (392)
........++++.+-.+ ..++.+..+|.+.++....
T Consensus 964 a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred EeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 23345677888888755 4778889999999987643
No 316
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.32 E-value=0.06 Score=45.76 Aligned_cols=233 Identities=14% Similarity=0.134 Sum_probs=133.2
Q ss_pred eeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCcee--EEe----cccccceEEEEEecC---CCEEEEE---eC
Q psy17243 21 TMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVV--STF----KSHQSTILAVAVLSD---SRRVVTS---DK 88 (392)
Q Consensus 21 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~--~~~----~~~~~~v~~~~~~~~---~~~l~~~---~~ 88 (392)
.+...-..-+.|+|.|+|.++++--..|.|++++..+++.. ..+ .........|+++|+ +..|++. ..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 34334456789999999987776655899999987666542 222 123456899999995 3444443 24
Q ss_pred CCeEEEEEcCCc----------eeee-ecc----cceeEEEEeCCCCEEEEecC-------------CCcEEEEeCCCCC
Q psy17243 89 AGVIAVWVADNA----------QLLY-SAL----GPSKCLTVTHNMKYIVSGDG-------------DNSLRIWPTSPQT 140 (392)
Q Consensus 89 d~~i~iwd~~~~----------~~~~-~~~----~~~~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~~ 140 (392)
++.|.-|.+..+ +.+. ... .....+.|.|++.+.++.+. .|.|.-++....-
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 456666666541 1121 111 12346999999987666432 3566666654210
Q ss_pred CC-----CcceeeeccccceEEEEEEcCCCEEEEee-CCCcEEEEEcCCCe------------------EEEEEecCCCc
Q psy17243 141 HK-----DDERFTVSHSEEITCFTVTWDSQYLITGS-RDMSLKVWQVVGGK------------------LAQVLVGHTDH 196 (392)
Q Consensus 141 ~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~------------------~~~~~~~~~~~ 196 (392)
.. ....+..++ .....++|+|++.+.++-. .++.=.|--+..+. ++..+..+...
T Consensus 186 p~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 186 APGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp CTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred cCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 00 111222233 3456789999876554432 22222222222221 22333322235
Q ss_pred eeEEEEecCCCcEEEEecCCCeEEEEECCCCce----eeeecccccceeEEEEcCCCeEEEEcC
Q psy17243 197 VSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGE----EHFLAGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 197 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
...++|. ++.++...-..+.|....+..... ...+.+....+..++..|||.+.+...
T Consensus 265 p~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 265 PSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 5677776 466777666677777777664432 223444456899999999999888765
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.31 E-value=0.039 Score=46.30 Aligned_cols=211 Identities=12% Similarity=0.082 Sum_probs=104.8
Q ss_pred CCCeEEEEeCC----CeEEEEeCCCCceeEE--ecccccceEEEEEecCCCEEEEEeC----C-----CeEEEEEcCCce
Q psy17243 37 NSIFAVSGSED----NTAKVWGLTLGSVVST--FKSHQSTILAVAVLSDSRRVVTSDK----A-----GVIAVWVADNAQ 101 (392)
Q Consensus 37 ~~~~l~~~~~d----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~----d-----~~i~iwd~~~~~ 101 (392)
++.+++.|+.+ ..+.+||..+.+-... +...... .+++.. +++.++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSG-LAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCccccc-ceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 55666666632 4688999887654322 1111111 122222 5666666664 2 468889988775
Q ss_pred eeeec--ccce-eEEEEeCCCCEEEEecCC-----CcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCC
Q psy17243 102 LLYSA--LGPS-KCLTVTHNMKYIVSGDGD-----NSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRD 173 (392)
Q Consensus 102 ~~~~~--~~~~-~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 173 (392)
-.... ..+- ...+...+++.++.|+.+ ..+.+||+.+............ ... .+++.. ++++++.|+.+
T Consensus 102 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~-~~~~~~-~~~iyv~GG~~ 178 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR-RIG-VGVAVL-NRLLYAVGGFD 178 (308)
T ss_dssp EEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC-CBS-CEEEEE-TTEEEEECCBC
T ss_pred EeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc-ccc-eEEEEE-CCEEEEEeCCC
Confidence 43221 1111 111122266677776643 4688898875433222111111 111 122222 56677777654
Q ss_pred -----CcEEEEEcCCCeEEEEEecCC-CceeEEEEecCCCcEEEEecCC-----CeEEEEECCCCceee--eecccccce
Q psy17243 174 -----MSLKVWQVVGGKLAQVLVGHT-DHVSCVAVAVTNKSLVVSGSKD-----SNLIVWDMETGGEEH--FLAGHLGCV 240 (392)
Q Consensus 174 -----g~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~--~~~~~~~~v 240 (392)
..+.+||+.+.+-...-.... ..-.+++.. ++.+++.|+.+ ..+.+||+.+.+-.. .++.....
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~- 255 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSA- 255 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBS-
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccc-
Confidence 468999998775432211111 111122232 56777777654 569999998765332 12111111
Q ss_pred eEEEEcCCCeEEEEcC
Q psy17243 241 TCVKLAGDGTVAMSDL 256 (392)
Q Consensus 241 ~~~~~~~dg~~~~~~~ 256 (392)
.+++. -++++++.+.
T Consensus 256 ~~~~~-~~~~i~v~GG 270 (308)
T 1zgk_A 256 LGITV-HQGRIYVLGG 270 (308)
T ss_dssp CEEEE-ETTEEEEECC
T ss_pred eEEEE-ECCEEEEEcC
Confidence 12222 2677777765
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.30 E-value=0.055 Score=45.29 Aligned_cols=209 Identities=8% Similarity=0.018 Sum_probs=104.6
Q ss_pred CeEEEEeC--CCeEEEEeCCCCceeEE--ecccccceEEEEEecCCCEEEEEeCC----CeEEEEEcCCceeeee--ccc
Q psy17243 39 IFAVSGSE--DNTAKVWGLTLGSVVST--FKSHQSTILAVAVLSDSRRVVTSDKA----GVIAVWVADNAQLLYS--ALG 108 (392)
Q Consensus 39 ~~l~~~~~--dg~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~--~~~ 108 (392)
.+++.|+. ...+.+||..+.+-... +......-..+. -+++.++.|+.+ ..+.+||+.+.+-... ...
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34555654 35788999887754322 211111112222 256666777654 6788899988754322 211
Q ss_pred ce-eEEEEeCCCCEEEEecCC------CcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC---------
Q psy17243 109 PS-KCLTVTHNMKYIVSGDGD------NSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR--------- 172 (392)
Q Consensus 109 ~~-~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------- 172 (392)
+. ...+...++..++.|+.+ ..+.+||..+.......... ....-.+++. -++++++.|+.
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML--TQRCSHGMVE-ANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS--SCCBSCEEEE-ETTEEEEECCEESCTTTCEE
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc--CCcceeEEEE-ECCEEEEECCCCCCCCcccc
Confidence 11 112222366677777654 46888998754322211111 1111112222 25666666653
Q ss_pred CCcEEEEEcCCCeEEEEEecCCCc-eeEEEEecCCCcEEEEecCC-----CeEEEEECCCCceee--eecccccceeEEE
Q psy17243 173 DMSLKVWQVVGGKLAQVLVGHTDH-VSCVAVAVTNKSLVVSGSKD-----SNLIVWDMETGGEEH--FLAGHLGCVTCVK 244 (392)
Q Consensus 173 dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~--~~~~~~~~v~~~~ 244 (392)
-..+.+||+.+.+-...-...... -.+++.. ++.+++.|+.+ ..+.+||+.+.+-.. .+.........+.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 345889999887543321111111 1222232 56677777654 358899998764322 2221111222222
Q ss_pred EcCCCeEEEEcC
Q psy17243 245 LAGDGTVAMSDL 256 (392)
Q Consensus 245 ~~~dg~~~~~~~ 256 (392)
+ ++++++.+.
T Consensus 246 ~--~~~i~v~GG 255 (306)
T 3ii7_A 246 V--GSIVYVLAG 255 (306)
T ss_dssp E--TTEEEEEEC
T ss_pred E--CCEEEEEeC
Confidence 2 667777665
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.30 E-value=0.044 Score=45.78 Aligned_cols=184 Identities=13% Similarity=0.097 Sum_probs=93.0
Q ss_pred CCeEEEEeCC----CeEEEEeCCCCceeEE--ecccccceEEEEEecCCCEEEEEeCC-----CeEEEEEcCCceeeeec
Q psy17243 38 SIFAVSGSED----NTAKVWGLTLGSVVST--FKSHQSTILAVAVLSDSRRVVTSDKA-----GVIAVWVADNAQLLYSA 106 (392)
Q Consensus 38 ~~~l~~~~~d----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~ 106 (392)
+.+++.|+.+ ..+.+||+.+.+-... +...... .+++. -+++.++.|+.+ ..+.+||..+.+-....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCR-AGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccccc-ceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 3455556543 4588899887653322 1111111 12222 256666666644 35888998877543221
Q ss_pred --ccc-eeEEEEeCCCCEEEEecCCC-----cEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCC-----
Q psy17243 107 --LGP-SKCLTVTHNMKYIVSGDGDN-----SLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRD----- 173 (392)
Q Consensus 107 --~~~-~~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 173 (392)
..+ ....+...++..++.|+.++ .+.+||+.+.......... ....-.+++. -++++++.|+.+
T Consensus 94 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 94 NMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMN--TRRSSVGVGV-VGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCS--SCCBSCEEEE-ETTEEEEECCEETTTTE
T ss_pred CCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCC--CcccCceEEE-ECCEEEEEeCCCCCCCc
Confidence 111 11112223566777776543 5778888654322211111 1111112222 256666666542
Q ss_pred --CcEEEEEcCCCeEEEEEecCC-CceeEEEEecCCCcEEEEecCC-----CeEEEEECCCCc
Q psy17243 174 --MSLKVWQVVGGKLAQVLVGHT-DHVSCVAVAVTNKSLVVSGSKD-----SNLIVWDMETGG 228 (392)
Q Consensus 174 --g~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 228 (392)
..+.+||+.+.+-...-.... ..-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 458899998875433211111 111222232 56777777754 368999998765
No 320
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.30 E-value=0.073 Score=46.22 Aligned_cols=227 Identities=11% Similarity=0.113 Sum_probs=135.5
Q ss_pred cCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEE
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRV 83 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 83 (392)
.+..|.|.|+.++.....-. -.--+.-.+|..+.||.=. ..++.|+|+++.+.++.+.- ...|.-=.|..+. .|
T Consensus 46 ~~~~vvIiDl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l 119 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TV 119 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEE---CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EE
T ss_pred CCCeEEEEECCCCCcceecc---cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eE
Confidence 34478888887755442211 1122455688888777654 67999999999999988874 4566677776544 44
Q ss_pred EEEeCCCeEEEEEcCCce-e--eeec-----ccceeEEEEeCCCCEEEEecC-------CCcEEEEeCCCCCCCCcceee
Q psy17243 84 VTSDKAGVIAVWVADNAQ-L--LYSA-----LGPSKCLTVTHNMKYIVSGDG-------DNSLRIWPTSPQTHKDDERFT 148 (392)
Q Consensus 84 ~~~~~d~~i~iwd~~~~~-~--~~~~-----~~~~~~~~~~~~~~~l~~~~~-------d~~i~~~d~~~~~~~~~~~~~ 148 (392)
+..+ +..|+-|+++... + +... ...+-....+++.++++..+- .|.+.+|..+. ......
T Consensus 120 ~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----~~sQ~i 194 (494)
T 1bpo_A 120 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----KVSQPI 194 (494)
T ss_dssp EEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT----CCEEEE
T ss_pred EEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc----cccchh
Confidence 4443 5679999997532 2 2211 124455667888888775432 47788998852 223333
Q ss_pred eccccceEEEEEEcC---CCEEEEeeC---CCcEEEEEcCCC--------eEEEE-Ee---cCCCceeEEEEecCCCcEE
Q psy17243 149 VSHSEEITCFTVTWD---SQYLITGSR---DMSLKVWQVVGG--------KLAQV-LV---GHTDHVSCVAVAVTNKSLV 210 (392)
Q Consensus 149 ~~~~~~v~~~~~~~~---~~~l~~~~~---dg~i~i~d~~~~--------~~~~~-~~---~~~~~v~~~~~~~~~~~~l 210 (392)
.+|...-..+.+..+ .+++..+.. .+.++|.++... +.... +. .-.+-..++..+ +...++
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs-~kygvi 273 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVV 273 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEE-TTTTEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEec-ccCCEE
Confidence 455443333322211 113333332 378999998542 11111 11 113344577888 555667
Q ss_pred EEecCCCeEEEEECCCCceeeeecccccceeE
Q psy17243 211 VSGSKDSNLIVWDMETGGEEHFLAGHLGCVTC 242 (392)
Q Consensus 211 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 242 (392)
..-+.-|.|++||++++.++..-+-....|..
T Consensus 274 yviTK~G~i~lyDleTgt~i~~nrIs~~~iF~ 305 (494)
T 1bpo_A 274 FLITKYGYIHLYDLETGTCIYMNRISGETIFV 305 (494)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEecCceEEEEecccceeeeeecccCCceEE
Confidence 77788999999999999988765544444443
No 321
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.30 E-value=0.067 Score=45.69 Aligned_cols=181 Identities=9% Similarity=0.088 Sum_probs=103.3
Q ss_pred eEEEEEecCCCEEEEE------------eCCCeEEEEEcCCc--ee--eeecc-------cceeEEEEeC--CCC-EEEE
Q psy17243 71 ILAVAVLSDSRRVVTS------------DKAGVIAVWVADNA--QL--LYSAL-------GPSKCLTVTH--NMK-YIVS 124 (392)
Q Consensus 71 v~~~~~~~~~~~l~~~------------~~d~~i~iwd~~~~--~~--~~~~~-------~~~~~~~~~~--~~~-~l~~ 124 (392)
...+...|+|..++++ ..+|.|.++|+.+. +. +.... .....+.+.+ ++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4455666766444443 26899999998742 21 21111 1334566544 343 3444
Q ss_pred e-cC--CCcEEEEeCCCCCCCCcceeee--ccccceEEEEEEcCCCEEEEee-----------------CCCcEEEEEcC
Q psy17243 125 G-DG--DNSLRIWPTSPQTHKDDERFTV--SHSEEITCFTVTWDSQYLITGS-----------------RDMSLKVWQVV 182 (392)
Q Consensus 125 ~-~~--d~~i~~~d~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~ 182 (392)
+ .. +..|.+|++............. ..-...+.+.+.++|.+.++.. ..|.|..+|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 4 33 5678888776432221111111 1234578999999998777654 1245555654
Q ss_pred CCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCC-Ccee--eeecccccceeEEEEcC-CCeEEEEc
Q psy17243 183 GGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMET-GGEE--HFLAGHLGCVTCVKLAG-DGTVAMSD 255 (392)
Q Consensus 183 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~--~~~~~~~~~v~~~~~~~-dg~~~~~~ 255 (392)
++. ..+...-...+.++|+|++..+.++-+..+.|..|++.. ++.. ..+ ...+....+++.+ +|.+.+.+
T Consensus 211 -~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 211 -NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp -TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred -CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 332 222223345689999955555666666789999999863 3321 233 2345678899999 59887754
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.27 E-value=0.074 Score=45.63 Aligned_cols=226 Identities=12% Similarity=0.073 Sum_probs=125.2
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEE---e----cccccceEEEEEecC---CCEEEEEe-C-------
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVST---F----KSHQSTILAVAVLSD---SRRVVTSD-K------- 88 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~l~~~~-~------- 88 (392)
..-..|+|.|+|++|+.+...|.|++++.+ ++.... + .........++++|+ +..|.+.. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456799999999834455568999999853 432211 1 112345789999996 45555443 2
Q ss_pred CCeEEEEEcCCc-------eeee-ecc------cceeEEEEeCCCCEEEEecC-------------CCcEEEEeCCCCCC
Q psy17243 89 AGVIAVWVADNA-------QLLY-SAL------GPSKCLTVTHNMKYIVSGDG-------------DNSLRIWPTSPQTH 141 (392)
Q Consensus 89 d~~i~iwd~~~~-------~~~~-~~~------~~~~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~~~ 141 (392)
...|..+++... +.+. ... .....+.|.|++.+.++.+. .|.|.-++....-.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666666432 1121 111 11357999999965555332 24677777653200
Q ss_pred ----------CCcceeeeccccceEEEEEEcCCCEEEEeeCCC--cEEEEEcCCC-------------------------
Q psy17243 142 ----------KDDERFTVSHSEEITCFTVTWDSQYLITGSRDM--SLKVWQVVGG------------------------- 184 (392)
Q Consensus 142 ----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~------------------------- 184 (392)
........++ .....++|.|....|+++.... .=.|.-+..+
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~ 255 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGE 255 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBS
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCC
Confidence 0111122222 4467899999434455543321 1122111111
Q ss_pred ------eEEEEEecCCCceeEEEEecC------CCcEEEEecCCCeEEEEECCCCceeee--e-cccccceeEEEEcCCC
Q psy17243 185 ------KLAQVLVGHTDHVSCVAVAVT------NKSLVVSGSKDSNLIVWDMETGGEEHF--L-AGHLGCVTCVKLAGDG 249 (392)
Q Consensus 185 ------~~~~~~~~~~~~v~~~~~~~~------~~~~l~~~~~dg~i~iwd~~~~~~~~~--~-~~~~~~v~~~~~~~dg 249 (392)
.++..+. +......++|... ++.++++.-..+.|...++..++.... + ......+..+++.|||
T Consensus 256 ~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 334 (353)
T 2g8s_A 256 IVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG 334 (353)
T ss_dssp SCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS
T ss_pred CCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC
Confidence 1122232 2235667777521 367777777788888888876543322 2 2233478999999999
Q ss_pred eEEEEc
Q psy17243 250 TVAMSD 255 (392)
Q Consensus 250 ~~~~~~ 255 (392)
.+.+..
T Consensus 335 ~lyv~t 340 (353)
T 2g8s_A 335 YLYVLT 340 (353)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 987753
No 323
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.21 E-value=0.17 Score=48.53 Aligned_cols=218 Identities=12% Similarity=0.133 Sum_probs=123.9
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeee
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYS 105 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 105 (392)
...|.++....++ .|..|+.+| +..||..+.+...........|.++.. .++ .|..++.+ -+..+|..+++....
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~ 136 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSF 136 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEe
Confidence 3568888777766 466666665 789998776443211112335776654 344 56666666 588889876654321
Q ss_pred -------cccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeec---cccceEEEEEEcCCCEEEEeeCCCc
Q psy17243 106 -------ALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVS---HSEEITCFTVTWDSQYLITGSRDMS 175 (392)
Q Consensus 106 -------~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~ 175 (392)
....+.++....++...+ ++.+ -|..|+........ ...... ....|.++...+++..|..|+. +-
T Consensus 137 ~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G 212 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY 212 (758)
T ss_dssp CHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE
T ss_pred ccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CC
Confidence 012456666666666444 5544 47778765322110 000000 1234788877777776666764 45
Q ss_pred EEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeec-------ccccceeEEEEcCC
Q psy17243 176 LKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLA-------GHLGCVTCVKLAGD 248 (392)
Q Consensus 176 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~d 248 (392)
+..+|..+++...........|.++... .++.+.+ |+. +-+.+++..+++...... -....|.++....+
T Consensus 213 l~~~~~~~~~~~~~~~l~~~~i~~i~~d-~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~ 289 (758)
T 3ott_A 213 LFQYFPSTGQIKQTEAFHNNSIKSLALD-GNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQE 289 (758)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEEEEEC-TTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTT
T ss_pred CeEEcCCCCeEEeccCCCCCeEEEEEEc-CCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCC
Confidence 8889987765432211123457777766 4555544 443 458888877654332111 11235888888777
Q ss_pred CeEEEEc
Q psy17243 249 GTVAMSD 255 (392)
Q Consensus 249 g~~~~~~ 255 (392)
|.+-+..
T Consensus 290 g~lWiGT 296 (758)
T 3ott_A 290 HNIWLGT 296 (758)
T ss_dssp CCEEEEE
T ss_pred CCEEEEe
Confidence 7655443
No 324
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.21 E-value=0.084 Score=45.08 Aligned_cols=178 Identities=8% Similarity=0.138 Sum_probs=104.9
Q ss_pred cCCeEEEEECCCcc-ceee--ecc-----CCcCeeEEEecC--CCC-eEEEE-eC--CCeEEEEeCCCCc----eeEEec
Q psy17243 4 MDCLVNVWQMNSHE-LQST--MEG-----HLNTVSCVAISP--NSI-FAVSG-SE--DNTAKVWGLTLGS----VVSTFK 65 (392)
Q Consensus 4 ~dg~i~vwd~~~~~-~~~~--~~~-----h~~~v~~~~~~~--~~~-~l~~~-~~--dg~v~iwd~~~~~----~~~~~~ 65 (392)
.+|.|.++|.++.. .... +.+ ..-....+.+.+ ++. +|+.+ .. +.+|.+|+++... .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 58899999987321 1122 222 223566777755 343 44444 22 4678888776532 233333
Q ss_pred cc-ccceEEEEEecCCCEEEEEe-----------------CCCeEEEEEcCCceeeeecccceeEEEEeCCCCEEEEec-
Q psy17243 66 SH-QSTILAVAVLSDSRRVVTSD-----------------KAGVIAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGD- 126 (392)
Q Consensus 66 ~~-~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 126 (392)
+. -...+.+.+.++|.+.++.. ..|.|..+|..+-+.+..-....+.++++|+++.++++.
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeC
Confidence 22 23578999999998777654 124566666543333333334568999999998887765
Q ss_pred CCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEc-CCCEEEEeeCC-CcEEEEEcC
Q psy17243 127 GDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTW-DSQYLITGSRD-MSLKVWQVV 182 (392)
Q Consensus 127 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d-g~i~i~d~~ 182 (392)
..+.|..|++............ ......-.+++.+ +|++.+++..+ +.|..|+..
T Consensus 241 ~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 241 LAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp GGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 4789999998643222222222 2345667888988 58877766533 345555543
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.18 E-value=0.083 Score=44.48 Aligned_cols=214 Identities=11% Similarity=0.096 Sum_probs=103.6
Q ss_pred eEEEEECCCcccee-eeccCCcCeeEEEecCCCCeEEEEeC----CC-------eEEEEeCCCCceeEE--ecccccceE
Q psy17243 7 LVNVWQMNSHELQS-TMEGHLNTVSCVAISPNSIFAVSGSE----DN-------TAKVWGLTLGSVVST--FKSHQSTIL 72 (392)
Q Consensus 7 ~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~----dg-------~v~iwd~~~~~~~~~--~~~~~~~v~ 72 (392)
.+.+||..+.+-.. .+..............++.+++.|+. ++ .+.+||..+.+-... +...... .
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-F 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-C
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-c
Confidence 37788887665433 11111112222233446677777773 12 177888877654322 1111111 1
Q ss_pred EEEEecCCCEEEEEeCC-------CeEEEEEcCCceeeee--cccce-eEEEEeCCCCEEEEecC------CCcEEEEeC
Q psy17243 73 AVAVLSDSRRVVTSDKA-------GVIAVWVADNAQLLYS--ALGPS-KCLTVTHNMKYIVSGDG------DNSLRIWPT 136 (392)
Q Consensus 73 ~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~~------d~~i~~~d~ 136 (392)
+++.. +++.++.|+.+ ..+.+||+.+.+-... ...+. ...+...++..++.|+. ...+.+||+
T Consensus 104 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 104 GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 22222 56666777653 3578888887654332 22111 11222246667777754 245889998
Q ss_pred CCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCC-----CcEEEEEcCCCeEEEE--EecCCCceeEEEEecCCCcE
Q psy17243 137 SPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRD-----MSLKVWQVVGGKLAQV--LVGHTDHVSCVAVAVTNKSL 209 (392)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~ 209 (392)
.+.......... ....-.+++. -++++++.|+.+ ..+.+||+.+.+-... +...... .+++. .++.+
T Consensus 183 ~~~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~--~~~~i 256 (318)
T 2woz_A 183 KKGDWKDLAPMK--TPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSS-ISLVS--LAGSL 256 (318)
T ss_dssp TTTEEEEECCCS--SCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBS-CEEEE--ETTEE
T ss_pred CCCEEEECCCCC--CCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccc-eEEEE--ECCEE
Confidence 754322211111 1111112222 256677777643 3577899887653322 1111111 12222 24667
Q ss_pred EEEecCC--------------CeEEEEECCCCc
Q psy17243 210 VVSGSKD--------------SNLIVWDMETGG 228 (392)
Q Consensus 210 l~~~~~d--------------g~i~iwd~~~~~ 228 (392)
++.|+.+ ..+.+||+.+.+
T Consensus 257 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 257 YAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 7776643 346667766544
No 326
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.01 E-value=0.14 Score=43.94 Aligned_cols=185 Identities=11% Similarity=0.066 Sum_probs=93.9
Q ss_pred CcCeeEEEecCC---CCeEEEEeC-C-----CeEEEEeCCCCce------eEEec---ccccceEEEEEecCCCEEEEEe
Q psy17243 26 LNTVSCVAISPN---SIFAVSGSE-D-----NTAKVWGLTLGSV------VSTFK---SHQSTILAVAVLSDSRRVVTSD 87 (392)
Q Consensus 26 ~~~v~~~~~~~~---~~~l~~~~~-d-----g~v~iwd~~~~~~------~~~~~---~~~~~v~~~~~~~~~~~l~~~~ 87 (392)
......|+++|+ +..|+.+.. . +.|..++...+.. +..+. ........++|.|+|...++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 456789999998 445554433 2 5788888764421 11232 1112236899999997666543
Q ss_pred C-------------CCeEEEEEcCCc---------------eeeeecccceeEEEEeC-CCCEEEEecCCCc--------
Q psy17243 88 K-------------AGVIAVWVADNA---------------QLLYSALGPSKCLTVTH-NMKYIVSGDGDNS-------- 130 (392)
Q Consensus 88 ~-------------d~~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~-------- 130 (392)
. .|.|.-++.+.. +....-......++++| ++.++++-.....
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~de 233 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDE 233 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCE
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeE
Confidence 2 245666665431 11111112345788999 5554444332222
Q ss_pred EEEEeCCCCC-------------CCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeE------EEEEe
Q psy17243 131 LRIWPTSPQT-------------HKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKL------AQVLV 191 (392)
Q Consensus 131 i~~~d~~~~~-------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~ 191 (392)
|.+....... ..... ...........++| .+++++++....+.|...++..... ...+.
T Consensus 234 i~~i~~G~nyGwp~~~g~~~~~~~~~p~-~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~ 311 (352)
T 2ism_A 234 VNLIVPGGNYGWPRVVGRGNDPRYRDPL-YFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL 311 (352)
T ss_dssp EEEECTTCBCCTTTCCSCCCCTTSCCCS-EECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEeccCCcCCCCcccCCCCCCCCcCCe-EecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec
Confidence 4333221100 00111 11122334567777 4676666666667788877753321 12222
Q ss_pred cCCCceeEEEEecCCCcEEEEe
Q psy17243 192 GHTDHVSCVAVAVTNKSLVVSG 213 (392)
Q Consensus 192 ~~~~~v~~~~~~~~~~~~l~~~ 213 (392)
.....+..+++.| ++.++++.
T Consensus 312 ~~~~rp~~v~~~p-dG~lyv~~ 332 (352)
T 2ism_A 312 SGFGRLREVQVGP-DGALYVTT 332 (352)
T ss_dssp ESSCCEEEEEECT-TSCEEEEE
T ss_pred ccCCCeeEEEECC-CCcEEEEE
Confidence 2235678888884 45554443
No 327
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.95 E-value=0.036 Score=43.27 Aligned_cols=101 Identities=6% Similarity=-0.116 Sum_probs=64.1
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCcee------EEecc-cccceEEEEEecCCCEEEEEeCCCeEEEEEcCC
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVV------STFKS-HQSTILAVAVLSDSRRVVTSDKAGVIAVWVADN 99 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~------~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 99 (392)
..+..++|+|++.+.++ .+|.+.-.+..+.... ..+-. --....++.|.|++.+.++ .||.|+-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46889999999885555 6787766665442211 11110 1112478899999987777 569888887633
Q ss_pred cee---------eee-cccceeEEEEeCCCCEEEEecCCCcEEE
Q psy17243 100 AQL---------LYS-ALGPSKCLTVTHNMKYIVSGDGDNSLRI 133 (392)
Q Consensus 100 ~~~---------~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~~ 133 (392)
... +.. --..+..+.+.|+|.+.++. ++.++-
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 211 111 11366899999999888877 676543
No 328
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.88 E-value=0.069 Score=46.27 Aligned_cols=131 Identities=14% Similarity=0.085 Sum_probs=89.3
Q ss_pred cCCeEEEEECCCccceeeeccC----CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCc------------eeEEecc-
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGH----LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGS------------VVSTFKS- 66 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~------------~~~~~~~- 66 (392)
.++.||.-++.....-+.++.. -..|..+..+|+|++||..+ +..|.|-.+..+. ..+.+.-
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 3567777777644444444432 23688899999999998886 4589998887332 1123322
Q ss_pred -----cccceEEEEEecC---CCEEEEEeCCCeEEEEEcCCce--e--eee----cc-----cceeEEEEeCCCCEEEEe
Q psy17243 67 -----HQSTILAVAVLSD---SRRVVTSDKAGVIAVWVADNAQ--L--LYS----AL-----GPSKCLTVTHNMKYIVSG 125 (392)
Q Consensus 67 -----~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~--~--~~~----~~-----~~~~~~~~~~~~~~l~~~ 125 (392)
...+|..+.|+|- +..|++-..|+.|++||+.... + +.. +. ..+.+++|..++-.|++.
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl 197 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCL 197 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEE
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEE
Confidence 2467999999996 4589999999999999998621 1 111 11 356788999888877775
Q ss_pred c--CCCcEEEEe
Q psy17243 126 D--GDNSLRIWP 135 (392)
Q Consensus 126 ~--~d~~i~~~d 135 (392)
+ ..|.|+-.-
T Consensus 198 ~~t~~GDIYAlc 209 (452)
T 3pbp_A 198 NTTEGGDIFAFY 209 (452)
T ss_dssp ECTTSCEEEEES
T ss_pred ecCCCCCEEEEC
Confidence 4 778876553
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.68 E-value=0.23 Score=41.69 Aligned_cols=182 Identities=8% Similarity=0.019 Sum_probs=94.0
Q ss_pred eEEEEeCCCeEEEEeCCCCceeE-EecccccceEEEEEecCCCEEEEEeC-----C------CeEEEEEcCCceeeee--
Q psy17243 40 FAVSGSEDNTAKVWGLTLGSVVS-TFKSHQSTILAVAVLSDSRRVVTSDK-----A------GVIAVWVADNAQLLYS-- 105 (392)
Q Consensus 40 ~l~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------~~i~iwd~~~~~~~~~-- 105 (392)
+++.|+ ..+.+||..+.+-.. .+..............+++.++.|+. . ..+..||..+.+-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344555 579999998877533 22211122333333457777777773 1 1277888887754322
Q ss_pred ccccee-EEEEeCCCCEEEEecCC--------CcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC----
Q psy17243 106 ALGPSK-CLTVTHNMKYIVSGDGD--------NSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR---- 172 (392)
Q Consensus 106 ~~~~~~-~~~~~~~~~~l~~~~~d--------~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---- 172 (392)
...+-. .....-++..++.|+.+ ..+.+||+.+.......... ....-.+++. .++++++.|+.
T Consensus 85 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 85 LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP--YVVYGHTVLS-HMDLVYVIGGKGSDR 161 (315)
T ss_dssp BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS--SCCBSCEEEE-ETTEEEEECCBCTTS
T ss_pred CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC--CcccceeEEE-ECCEEEEEeCCCCCC
Confidence 111111 11122256666676632 46888998754322221111 1111112222 35667777765
Q ss_pred --CCcEEEEEcCCCeEEEEEecCCCc-eeEEEEecCCCcEEEEecCCC-----eEEEEECCCCc
Q psy17243 173 --DMSLKVWQVVGGKLAQVLVGHTDH-VSCVAVAVTNKSLVVSGSKDS-----NLIVWDMETGG 228 (392)
Q Consensus 173 --dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~ 228 (392)
-..+.+||+.+.+-...-...... -.+++.. ++.+++.|+.++ .+.+||+.+.+
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 246899999877533221111111 1122222 566777776544 58889988764
No 330
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.60 E-value=0.12 Score=51.97 Aligned_cols=221 Identities=7% Similarity=0.079 Sum_probs=121.3
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCC-CceeEEeccc----ccceEEEEEecC
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTL-GSVVSTFKSH----QSTILAVAVLSD 79 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~ 79 (392)
..++.|+|+++.+.++.+. ...+|.--.|-.... |+-.+ +..|.-|++.. ..+.+.+..| ...|..-..+++
T Consensus 85 g~~lQiFnl~~k~klks~~-~~e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~ 161 (1630)
T 1xi4_A 85 GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAK 161 (1630)
T ss_pred CCeEEEeehHHhhhhcccc-cCCCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCC
Confidence 3567777777766666655 344566667765543 33332 45799999864 2344444434 456777777888
Q ss_pred CCEEEEEe-------CCCeEEEEEcCCcee--eeecccceeEEEE--eCC-CCEEEEecC---CCcEEEEeCCCC-CCCC
Q psy17243 80 SRRVVTSD-------KAGVIAVWVADNAQL--LYSALGPSKCLTV--THN-MKYIVSGDG---DNSLRIWPTSPQ-THKD 143 (392)
Q Consensus 80 ~~~l~~~~-------~d~~i~iwd~~~~~~--~~~~~~~~~~~~~--~~~-~~~l~~~~~---d~~i~~~d~~~~-~~~~ 143 (392)
.+.++..+ -.|.+.+|..+.+.. +..+...-..+.. .+. ...++.+.. .+.+++.++... ....
T Consensus 162 ~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~ 241 (1630)
T 1xi4_A 162 QKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ 241 (1630)
T ss_pred CCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCC
Confidence 88766443 347788887775532 1111110001111 011 112222211 368888888543 1111
Q ss_pred cc-----eeee---ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecC
Q psy17243 144 DE-----RFTV---SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSK 215 (392)
Q Consensus 144 ~~-----~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 215 (392)
.. .... ....-..++..++.-..++.-+.-|.|++||+.++.++..-+-...+|...+...+.+.+ ++...
T Consensus 242 ~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~-~~vnr 320 (1630)
T 1xi4_A 242 PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGI-IGVNR 320 (1630)
T ss_pred CCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCce-EEEcC
Confidence 11 1111 123334567778877788889999999999999998876554444455444444233333 33345
Q ss_pred CCeEEEEECCCCce
Q psy17243 216 DSNLIVWDMETGGE 229 (392)
Q Consensus 216 dg~i~iwd~~~~~~ 229 (392)
.|.|.--.++....
T Consensus 321 ~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 321 KGQVLSVCVEEENI 334 (1630)
T ss_pred CceEEEEEEccchh
Confidence 66665555554433
No 331
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.59 E-value=0.25 Score=49.83 Aligned_cols=218 Identities=11% Similarity=0.114 Sum_probs=122.3
Q ss_pred cCCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEE
Q psy17243 4 MDCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRV 83 (392)
Q Consensus 4 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 83 (392)
...+|.|.|+.++..+..- .-.--+.-.+|..+.||.=. ..++.|+|+++.+.++.+.- ..+|.-=.|..+. .|
T Consensus 46 ~~~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~-~l 119 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TV 119 (1630)
T ss_pred CCceEEEEECCCCCCcccc---cccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-ee
Confidence 3447778888765543111 11112344577777666654 67899999999988887774 4567777776544 33
Q ss_pred EEEeCCCeEEEEEcCCce-eeeec-------ccceeEEEEeCCCCEEEEec-------CCCcEEEEeCCCCCCCCcceee
Q psy17243 84 VTSDKAGVIAVWVADNAQ-LLYSA-------LGPSKCLTVTHNMKYIVSGD-------GDNSLRIWPTSPQTHKDDERFT 148 (392)
Q Consensus 84 ~~~~~d~~i~iwd~~~~~-~~~~~-------~~~~~~~~~~~~~~~l~~~~-------~d~~i~~~d~~~~~~~~~~~~~ 148 (392)
+..+ +..|+-|++.... +.+.+ ...+-.-..+++.++++..+ -.|.+.+|..+.... ...
T Consensus 120 ~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s----Q~i 194 (1630)
T 1xi4_A 120 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPI 194 (1630)
T ss_pred EEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc----hhh
Confidence 3333 4569999997532 21111 12344556677888877543 347888998763222 122
Q ss_pred eccccceEEEEEE--cCC-CEEEEee---CCCcEEEEEcCCC---eE------EEEEec---CCCceeEEEEecCCCcEE
Q psy17243 149 VSHSEEITCFTVT--WDS-QYLITGS---RDMSLKVWQVVGG---KL------AQVLVG---HTDHVSCVAVAVTNKSLV 210 (392)
Q Consensus 149 ~~~~~~v~~~~~~--~~~-~~l~~~~---~dg~i~i~d~~~~---~~------~~~~~~---~~~~v~~~~~~~~~~~~l 210 (392)
.+|...-..+.+. +.. +.+..+. ..+.++|.++... .+ +..+.. -.+-..++..+ +...++
T Consensus 195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs-~k~g~i 273 (1630)
T 1xi4_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVV 273 (1630)
T ss_pred hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEec-cccCEE
Confidence 2333322222221 111 1222211 1368888888543 11 111111 12233456677 445566
Q ss_pred EEecCCCeEEEEECCCCceeeee
Q psy17243 211 VSGSKDSNLIVWDMETGGEEHFL 233 (392)
Q Consensus 211 ~~~~~dg~i~iwd~~~~~~~~~~ 233 (392)
..-+.-|.|.+||+.++.++..-
T Consensus 274 y~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 274 FLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred EEEecCceEEEEecccchhhhhc
Confidence 66778999999999999876543
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.58 E-value=0.39 Score=43.18 Aligned_cols=255 Identities=10% Similarity=0.057 Sum_probs=145.1
Q ss_pred CCccCCeEEEEECCCccceeeeccC-------------------------CcCe--eEEEecC---CCCeEEEEe-CCCe
Q psy17243 1 MGGMDCLVNVWQMNSHELQSTMEGH-------------------------LNTV--SCVAISP---NSIFAVSGS-EDNT 49 (392)
Q Consensus 1 tg~~dg~i~vwd~~~~~~~~~~~~h-------------------------~~~v--~~~~~~~---~~~~l~~~~-~dg~ 49 (392)
+|+..|.|+|+-+.+++.++.+.-. .+.. ..+.+.. ||+||+.-. .+..
T Consensus 75 SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan~R 154 (638)
T 3sbq_A 75 SGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKANSR 154 (638)
T ss_dssp ECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTTTE
T ss_pred ecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCCcc
Confidence 5889999999999988777665210 0111 1233322 567777665 4567
Q ss_pred EEEEeCCCCceeEEecc-cccceEEEEEe--cCCCEEEEEeCC-------CeE---------EE---EEcCCceeeeec-
Q psy17243 50 AKVWGLTLGSVVSTFKS-HQSTILAVAVL--SDSRRVVTSDKA-------GVI---------AV---WVADNAQLLYSA- 106 (392)
Q Consensus 50 v~iwd~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~d-------~~i---------~i---wd~~~~~~~~~~- 106 (392)
|-..+++..++-+.+.. ....+..+.|. |+..+++.+++. |.. .+ .|.++.+.....
T Consensus 155 vAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Qv~ 234 (638)
T 3sbq_A 155 VARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQVI 234 (638)
T ss_dssp EEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEEEE
T ss_pred eEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEEEE
Confidence 88888888877655542 34568888886 677888887643 221 11 122222221111
Q ss_pred -ccceeEEEEeCCCCEEEEecCCC----------------------------------------cEEEEeCCCCCC-CCc
Q psy17243 107 -LGPSKCLTVTHNMKYIVSGDGDN----------------------------------------SLRIWPTSPQTH-KDD 144 (392)
Q Consensus 107 -~~~~~~~~~~~~~~~l~~~~~d~----------------------------------------~i~~~d~~~~~~-~~~ 144 (392)
.+........+++.+.++.+.+. .+.+.|.+.... ...
T Consensus 235 v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~~~~ 314 (638)
T 3sbq_A 235 VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGKDSK 314 (638)
T ss_dssp ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTBCCS
T ss_pred cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccccCCc
Confidence 11111233345566655544221 233444432110 112
Q ss_pred ceeeeccccceEEEEEEcCCCEEEEeeC-CCcEEEEEcCCC------eE-------EEEEecCCCceeEEEEecCCCcEE
Q psy17243 145 ERFTVSHSEEITCFTVTWDSQYLITGSR-DMSLKVWQVVGG------KL-------AQVLVGHTDHVSCVAVAVTNKSLV 210 (392)
Q Consensus 145 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~------~~-------~~~~~~~~~~v~~~~~~~~~~~~l 210 (392)
.............+.++|||+++++++. +.++.++|++.. +. ..... -.-.....+|. .+++..
T Consensus 315 ~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd-~~G~aY 392 (638)
T 3sbq_A 315 FTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFD-GRGNAY 392 (638)
T ss_dssp SEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEEC-SSSEEE
T ss_pred eEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEEC-CCCceE
Confidence 2222233445567889999999887764 789999998742 11 22222 22345567898 566666
Q ss_pred EEecCCCeEEEEECCCC----------ceeeeecccccceeEE-----EEcCCCeEEEEcCC
Q psy17243 211 VSGSKDSNLIVWDMETG----------GEEHFLAGHLGCVTCV-----KLAGDGTVAMSDLP 257 (392)
Q Consensus 211 ~~~~~dg~i~iwd~~~~----------~~~~~~~~~~~~v~~~-----~~~~dg~~~~~~~~ 257 (392)
.+---|..|.-|++... ..+..+..|-++-... .-.+||+++++.-+
T Consensus 393 TtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 393 TTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred eeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 77778999999998753 3444555444332222 23579999998753
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.47 E-value=0.61 Score=44.10 Aligned_cols=193 Identities=9% Similarity=0.040 Sum_probs=103.0
Q ss_pred CCCCeEEEEeCC----CeEEEEeCCCCceeEEe-c------ccccceEEEEEec-CCCEEEEEeCC------CeEEEEEc
Q psy17243 36 PNSIFAVSGSED----NTAKVWGLTLGSVVSTF-K------SHQSTILAVAVLS-DSRRVVTSDKA------GVIAVWVA 97 (392)
Q Consensus 36 ~~~~~l~~~~~d----g~v~iwd~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~iwd~ 97 (392)
.++..++.|+.+ ..+.+||..+.+-...- . .....-.+++..+ +++.++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 455667777653 46888998877543322 1 1111123344443 66677777643 35788898
Q ss_pred CCceeeee--cccce--eEEEEeCCCCEEEEecCCC--cEEEEeCCCCCCCCccee--eeccccceEEEEEEcC-CCEEE
Q psy17243 98 DNAQLLYS--ALGPS--KCLTVTHNMKYIVSGDGDN--SLRIWPTSPQTHKDDERF--TVSHSEEITCFTVTWD-SQYLI 168 (392)
Q Consensus 98 ~~~~~~~~--~~~~~--~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~--~~~~~~~v~~~~~~~~-~~~l~ 168 (392)
.+.+-... ...+. .+.+...++..++.|+.++ .+.+||..+......... ..........+.+..+ +++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 88644322 11111 1233324788888887654 689999876443222110 0011112233445554 56777
Q ss_pred EeeC--C-----CcEEEEEcCCCeE-----EEEEec--CCCc-eeEEEEecCCCcEEEEecC--------CCeEEEEECC
Q psy17243 169 TGSR--D-----MSLKVWQVVGGKL-----AQVLVG--HTDH-VSCVAVAVTNKSLVVSGSK--------DSNLIVWDME 225 (392)
Q Consensus 169 ~~~~--d-----g~i~i~d~~~~~~-----~~~~~~--~~~~-v~~~~~~~~~~~~l~~~~~--------dg~i~iwd~~ 225 (392)
.|+. + ..+.+||+.+.+. -..+.. .... -.+++.. .++.+++.|+. ...+.+||+.
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 7765 2 4689999988761 112211 1111 1122232 33677777774 3459999998
Q ss_pred CCce
Q psy17243 226 TGGE 229 (392)
Q Consensus 226 ~~~~ 229 (392)
+.+-
T Consensus 635 t~~W 638 (695)
T 2zwa_A 635 SETL 638 (695)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 7654
No 334
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.38 E-value=0.97 Score=45.38 Aligned_cols=239 Identities=10% Similarity=0.037 Sum_probs=128.9
Q ss_pred eEEEEECCCccceeeecc-CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEe-cccccceEEEEEecC-----
Q psy17243 7 LVNVWQMNSHELQSTMEG-HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTF-KSHQSTILAVAVLSD----- 79 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~----- 79 (392)
.|++.+....+.+..+.. ....|...+.+. .+++.++ .+.+.++++++++..... ..-...|.|+++.|.
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence 456666555445555543 234576666553 3565554 678888887766432211 123567999998763
Q ss_pred -CCEEEEEeC-CCeEEEEEcCCceeeee--ccc--ceeEEEEe--CCCCEEEEecCCCcEEEEeCCCCC--CCCcceeee
Q psy17243 80 -SRRVVTSDK-AGVIAVWVADNAQLLYS--ALG--PSKCLTVT--HNMKYIVSGDGDNSLRIWPTSPQT--HKDDERFTV 149 (392)
Q Consensus 80 -~~~l~~~~~-d~~i~iwd~~~~~~~~~--~~~--~~~~~~~~--~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~ 149 (392)
+.++++|.. |++++|+++.+.+.+.. +.. ...++.+. ....+|.+|-.||.+..+.+.... .........
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~L 649 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTL 649 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEEC
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEc
Confidence 368999996 99999999987665542 211 23333332 234678899999998777654321 111111222
Q ss_pred ccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeE-EEEecCC-CcEEEEecCCCeEEEEECCCC
Q psy17243 150 SHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSC-VAVAVTN-KSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 150 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~-~~~l~~~~~dg~i~iwd~~~~ 227 (392)
+ ..++.-..+...+..-+.+..+....+|.-+ ++.... .-....+.. ..|+... ..-++..+ ++.++|..+.+.
T Consensus 650 G-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~ 725 (1158)
T 3ei3_A 650 G-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEI 725 (1158)
T ss_dssp C-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCS
T ss_pred C-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCcccCCCcEEEEc-CCceEEEEeccc
Confidence 2 3455544454444433333334445555533 332221 111223333 3444221 23344333 456999987654
Q ss_pred cee--eeecccccceeEEEEcCCCeEEE
Q psy17243 228 GEE--HFLAGHLGCVTCVKLAGDGTVAM 253 (392)
Q Consensus 228 ~~~--~~~~~~~~~v~~~~~~~dg~~~~ 253 (392)
+.. .+++ -...+..++++|+.+.++
T Consensus 726 ~~~~~~~ip-L~~Tprri~y~~~~~~~~ 752 (1158)
T 3ei3_A 726 QKLHIRTVP-LYESPRKICYQEVSQCFG 752 (1158)
T ss_dssp SSEEEEEEE-CSSEEEEEEEEGGGTEEE
T ss_pred CCeeEEEEe-CCCCceEEEEcCCCCEEE
Confidence 322 2332 335778888888766543
No 335
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.31 E-value=0.39 Score=40.04 Aligned_cols=196 Identities=10% Similarity=0.089 Sum_probs=108.0
Q ss_pred CCCCeEEEEe--CCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCC--------------CeEEEEEcCC
Q psy17243 36 PNSIFAVSGS--EDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKA--------------GVIAVWVADN 99 (392)
Q Consensus 36 ~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------~~i~iwd~~~ 99 (392)
+++.+|+... .++.|...+.+... ...+... . +--+++++..|+-+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 4556665543 34566666654333 3334321 1 23457888888776543 3677778777
Q ss_pred ceeeeecccceeEEEEeCCCCEEEEec----CCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC-CC
Q psy17243 100 AQLLYSALGPSKCLTVTHNMKYIVSGD----GDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR-DM 174 (392)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~----~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg 174 (392)
.+...-.... +..+++++++|+... ....|...++... ....+. .+.. ..++++++.|+-.+. ..
T Consensus 98 ~~~~~l~~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs---~~~~lt-~~~~----~~~~~~g~~iy~t~~g~~ 167 (302)
T 3s25_A 98 HGSTVLDPDP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE---EKKKIK-NHYL----FTCNTSDRYFYYNNPKNG 167 (302)
T ss_dssp CCCEEEECSC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSC---CCEEEE-SSCC----CCSEEETTEEEEECTTTC
T ss_pred CcceEeecCC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCC---CeEEEe-CCCc----eEeeEECCEEEEEeCCCc
Confidence 6543332222 346778888888775 3345555565422 222222 2211 356778888776654 67
Q ss_pred cEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCC-CeEEEEECCCCceeeeecccccceeEEEEcCCCeEEE
Q psy17243 175 SLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKD-SNLIVWDMETGGEEHFLAGHLGCVTCVKLAGDGTVAM 253 (392)
Q Consensus 175 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~dg~~~~ 253 (392)
.|...++..+.....+. +... ..+.|.++.+..+-..+ ..|..-++.... ...+.. ..+ ..|+|++..+.
T Consensus 168 ~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy 238 (302)
T 3s25_A 168 QLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIF 238 (302)
T ss_dssp CEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEE
T ss_pred eEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEE
Confidence 88888887665444333 2222 33555555555554333 466666766444 333322 222 34788888888
Q ss_pred Ec
Q psy17243 254 SD 255 (392)
Q Consensus 254 ~~ 255 (392)
+.
T Consensus 239 ~~ 240 (302)
T 3s25_A 239 YQ 240 (302)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.24 E-value=0.086 Score=44.59 Aligned_cols=189 Identities=7% Similarity=0.028 Sum_probs=101.8
Q ss_pred CeEEEEeCCCeEEEEeCCCCceeEEecccc-cceEEEEE--ecCCCEEEEE--eCCCeEEEEEcCCceeeeecccc--ee
Q psy17243 39 IFAVSGSEDNTAKVWGLTLGSVVSTFKSHQ-STILAVAV--LSDSRRVVTS--DKAGVIAVWVADNAQLLYSALGP--SK 111 (392)
Q Consensus 39 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~--~~ 111 (392)
.+++.++.||.|.-.|.++|+..-+++... .++....- .+.+..++.+ +.||.|..++..++........+ +.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 368889999999999999999988887541 22222110 0112244444 58999999999888654433211 10
Q ss_pred --EEEEe-----------CCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccc----cceEEEEEE-----cCCCEEEE
Q psy17243 112 --CLTVT-----------HNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHS----EEITCFTVT-----WDSQYLIT 169 (392)
Q Consensus 112 --~~~~~-----------~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~----~~v~~~~~~-----~~~~~l~~ 169 (392)
-+... ..+..+++|+.+|.+...|+.+++..-......... ....|.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 01111 146688999999999999998665432222110000 000111110 12356777
Q ss_pred eeCCCcEEEEEcCCCeEEEE-----EecCCCc--ee-EEEEecCCCcEEEEecCCCeEEEEECCCCceee
Q psy17243 170 GSRDMSLKVWQVVGGKLAQV-----LVGHTDH--VS-CVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEH 231 (392)
Q Consensus 170 ~~~dg~i~i~d~~~~~~~~~-----~~~~~~~--v~-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 231 (392)
+..+..+.+.+ ++++ +.. +...... +. .-..+ .++.+ +.++.||.|.-+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s-~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFS-KDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSC-SSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccc-cCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77666666666 4443 211 1111000 00 00001 12444 446789999999999888765
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.08 E-value=0.53 Score=39.47 Aligned_cols=182 Identities=9% Similarity=0.058 Sum_probs=90.6
Q ss_pred eEEEEeCCCeEEEEeCCCCceeE-EecccccceEEEEEecCCCEEEEEeC----CC-------eEEEEEcCCceeeeecc
Q psy17243 40 FAVSGSEDNTAKVWGLTLGSVVS-TFKSHQSTILAVAVLSDSRRVVTSDK----AG-------VIAVWVADNAQLLYSAL 107 (392)
Q Consensus 40 ~l~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~----d~-------~i~iwd~~~~~~~~~~~ 107 (392)
+++.|+. .+..||..+.+-.. .+..............++..++.|+. ++ .+..||..+.+-.....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 4445543 48899998876543 11111122223333456777777773 12 27788887765433211
Q ss_pred --cce-eEEEEeCCCCEEEEecCC-------CcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeC-----
Q psy17243 108 --GPS-KCLTVTHNMKYIVSGDGD-------NSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSR----- 172 (392)
Q Consensus 108 --~~~-~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----- 172 (392)
.+. .......++..++.|+.+ ..+.+||+.+............ ... .+++. .++++++.|+.
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~-~~~~~-~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK-VYG-HNVIS-HNGMIYCLGGKTDDKK 172 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC-EES-CEEEE-ETTEEEEECCEESSSC
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc-ccc-cEEEE-ECCEEEEEcCCCCCCC
Confidence 111 111122256667777653 3577888865432221111100 011 11222 36667677764
Q ss_pred -CCcEEEEEcCCCeEEEEEecCCC-ceeEEEEecCCCcEEEEecCC-----CeEEEEECCCCc
Q psy17243 173 -DMSLKVWQVVGGKLAQVLVGHTD-HVSCVAVAVTNKSLVVSGSKD-----SNLIVWDMETGG 228 (392)
Q Consensus 173 -dg~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 228 (392)
-..+.+||+.+.+-...-..... .-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 24589999988764332111111 11222332 46676766643 357789988765
No 338
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.07 E-value=0.49 Score=38.99 Aligned_cols=229 Identities=12% Similarity=0.083 Sum_probs=102.8
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEE
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVV 84 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 84 (392)
||.|..|-....-.+..-......|..++...+.. ++. . ||.|..|-....-.+..-..-...|..++.-.+ ..+
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~ 115 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASY 115 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEE
Confidence 67777776543211111111223566666544432 222 3 788888865432211111111235666665433 333
Q ss_pred EEeCCCeEEEEEcCCceeee---ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEE
Q psy17243 85 TSDKAGVIAVWVADNAQLLY---SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVT 161 (392)
Q Consensus 85 ~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~ 161 (392)
.-. +|.|+.|-......+. .....+..++...+ ..++-. ||.|..|-........ ........|..++..
T Consensus 116 al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg---~p~~~~~~v~~i~~G 188 (282)
T 3qhy_B 116 ALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTT---VPAEAQSGVDDVAGG 188 (282)
T ss_dssp EEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEEC
T ss_pred EEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCC---CceecCCCeEEEEec
Confidence 334 7888888654322111 11223333333222 222223 6777777554322221 111123455655543
Q ss_pred cCCCEEEEeeCCCcEEEEEcCCCeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeeeeccccccee
Q psy17243 162 WDSQYLITGSRDMSLKVWQVVGGKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVT 241 (392)
Q Consensus 162 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 241 (392)
.+ +.++- .+|.|+.|-......+..-......|..++.. . ...++. . ||.|+.|-.....++.. ...|.
T Consensus 189 ~~--hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G-~-~h~~al-~-~g~v~~wG~n~~gq~~v----~~~v~ 257 (282)
T 3qhy_B 189 IF--HSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASG-E-WYSLAL-K-NGKVIAWGSSRTAPSSV----QSGVS 257 (282)
T ss_dssp SS--EEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEEC-S-SCEEEE-E-TTEEEEESTTCCCCGGG----SSCEE
T ss_pred CC--EEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcC-C-CEEEEE-E-CCEEEEecCCCCccccC----CCCcE
Confidence 22 22223 47788887654321111101112345556544 2 223332 2 88888886554333222 23566
Q ss_pred EEEEcCCCeEEEEcC
Q psy17243 242 CVKLAGDGTVAMSDL 256 (392)
Q Consensus 242 ~~~~~~dg~~~~~~~ 256 (392)
+++-...-.+.+...
T Consensus 258 ~iaaG~~h~~al~~~ 272 (282)
T 3qhy_B 258 SIEAGPNAAYALKGG 272 (282)
T ss_dssp EEEECSSCEEEEEC-
T ss_pred EEEECcCeEEEEecC
Confidence 777766666666543
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.79 E-value=0.48 Score=40.49 Aligned_cols=91 Identities=12% Similarity=0.043 Sum_probs=45.8
Q ss_pred CCCeEEEEeC-CCeEEEEeCCC--Cce--eEEecccccceEEEEEecCCCEEEEEeC-C---------CeEEEEEcCCce
Q psy17243 37 NSIFAVSGSE-DNTAKVWGLTL--GSV--VSTFKSHQSTILAVAVLSDSRRVVTSDK-A---------GVIAVWVADNAQ 101 (392)
Q Consensus 37 ~~~~l~~~~~-dg~v~iwd~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d---------~~i~iwd~~~~~ 101 (392)
++++++.|+. ...+.+||+.+ .+- +..+......-.+++.. +++.++.|+. + ..+.+||+.+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-TTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-CCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 5666666654 35688899864 322 11222011111222222 5666666665 1 468899998875
Q ss_pred eeee--cc-cc-eeEEEEeCCCCEEEEecCC
Q psy17243 102 LLYS--AL-GP-SKCLTVTHNMKYIVSGDGD 128 (392)
Q Consensus 102 ~~~~--~~-~~-~~~~~~~~~~~~l~~~~~d 128 (392)
-... .. .+ ....+...+++.++.|+.+
T Consensus 98 W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred EEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 4322 11 11 1122223567777777754
No 340
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.77 E-value=0.81 Score=39.13 Aligned_cols=207 Identities=11% Similarity=0.014 Sum_probs=104.8
Q ss_pred CCeEEEEECCCcc-ceeee---ccCCcCeeEEEecCC---CCeEEEEeC----C----CeEEEEeCCCC--c-----ee-
Q psy17243 5 DCLVNVWQMNSHE-LQSTM---EGHLNTVSCVAISPN---SIFAVSGSE----D----NTAKVWGLTLG--S-----VV- 61 (392)
Q Consensus 5 dg~i~vwd~~~~~-~~~~~---~~h~~~v~~~~~~~~---~~~l~~~~~----d----g~v~iwd~~~~--~-----~~- 61 (392)
+|.|++++ .+++ .+..+ .........|+++|+ +..|+.+.. + +.|..|+.... . .+
T Consensus 48 ~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~ 126 (354)
T 3a9g_A 48 PGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLI 126 (354)
T ss_dssp TTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEE
T ss_pred CCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEE
Confidence 46777776 3443 22211 112356889999997 444544432 3 56777776544 1 11
Q ss_pred EEecc-cccceEEEEEecCCCEEEEEeC-------------CCeEEEEEcCCc----------eeeeecccceeEEEEeC
Q psy17243 62 STFKS-HQSTILAVAVLSDSRRVVTSDK-------------AGVIAVWVADNA----------QLLYSALGPSKCLTVTH 117 (392)
Q Consensus 62 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~----------~~~~~~~~~~~~~~~~~ 117 (392)
..+.. .......++|.|+|.+.++.+. .|.|.-++.+.. +....-......++++|
T Consensus 127 ~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~ 206 (354)
T 3a9g_A 127 DGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHR 206 (354)
T ss_dssp EEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECT
T ss_pred EcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeC
Confidence 11221 1112467999999986666432 245665555432 11111112345789999
Q ss_pred -CCCEEEEecCCC---cEEEEeCCCC--------C-----CCCcceeeeccccceEEEEEE-------cCCCEEEEeeCC
Q psy17243 118 -NMKYIVSGDGDN---SLRIWPTSPQ--------T-----HKDDERFTVSHSEEITCFTVT-------WDSQYLITGSRD 173 (392)
Q Consensus 118 -~~~~l~~~~~d~---~i~~~d~~~~--------~-----~~~~~~~~~~~~~~v~~~~~~-------~~~~~l~~~~~d 173 (392)
++.++++-...+ .|.+...... . .................++|. .+++++++....
T Consensus 207 ~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~ 286 (354)
T 3a9g_A 207 ASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRG 286 (354)
T ss_dssp TTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTT
T ss_pred CCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCC
Confidence 555444432221 2433321110 0 000111110123456778883 467677666667
Q ss_pred CcEEEEEcCCC-eEE--EEEe-cCCCceeEEEEecCCCcEEEEe
Q psy17243 174 MSLKVWQVVGG-KLA--QVLV-GHTDHVSCVAVAVTNKSLVVSG 213 (392)
Q Consensus 174 g~i~i~d~~~~-~~~--~~~~-~~~~~v~~~~~~~~~~~~l~~~ 213 (392)
+.|...++... +.. ..+. +....+..+++. +++.++++.
T Consensus 287 ~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~-pDG~lyv~~ 329 (354)
T 3a9g_A 287 SMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVID-DDGGILIST 329 (354)
T ss_dssp TEEEEEEECGGGCEEEEEEECTTTSCCEEEEEEC-TTSCEEEEE
T ss_pred CEEEEEEECCCCcccceeeeccCCCCCeeEEEEC-CCCcEEEEE
Confidence 78888888753 222 2232 223567888888 455555554
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.74 E-value=1 Score=40.02 Aligned_cols=18 Identities=11% Similarity=0.161 Sum_probs=14.9
Q ss_pred ceeEEEEcCCCeEEEEcC
Q psy17243 239 CVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 239 ~v~~~~~~~dg~~~~~~~ 256 (392)
....++|.|+|.+.++..
T Consensus 229 Np~gla~dp~G~L~~~d~ 246 (454)
T 1cru_A 229 NPQGLAFTPNGKLLQSEQ 246 (454)
T ss_dssp EEEEEEECTTSCEEEEEE
T ss_pred CcceEEECCCCCEEEEec
Confidence 467899999999888874
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.71 E-value=1.3 Score=41.90 Aligned_cols=182 Identities=9% Similarity=0.048 Sum_probs=95.1
Q ss_pred CeEEEEECCCccceeee-c------cCCcCeeEEEecC-CCCeEEEEeCC------CeEEEEeCCCCceeEEecccccc-
Q psy17243 6 CLVNVWQMNSHELQSTM-E------GHLNTVSCVAISP-NSIFAVSGSED------NTAKVWGLTLGSVVSTFKSHQST- 70 (392)
Q Consensus 6 g~i~vwd~~~~~~~~~~-~------~h~~~v~~~~~~~-~~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~- 70 (392)
..+.+||..+.+-...- . .....-.+++..+ ++++++.|+.+ ..+.+||..+.+-...-......
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 45778887765432221 1 0111112333333 67777777654 35788998876433221111111
Q ss_pred eEEEEEecCCCEEEEEeCCC--eEEEEEcCCceeeeecc-----cc---eeEEEEeCC-CCEEEEecC--C-----CcEE
Q psy17243 71 ILAVAVLSDSRRVVTSDKAG--VIAVWVADNAQLLYSAL-----GP---SKCLTVTHN-MKYIVSGDG--D-----NSLR 132 (392)
Q Consensus 71 v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~-----~~---~~~~~~~~~-~~~l~~~~~--d-----~~i~ 132 (392)
-.+++...+++.++.|+.++ .+.+||+.+.+-..... .+ ..++.+..+ +..++.|+. + ..+.
T Consensus 492 ~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~ 571 (695)
T 2zwa_A 492 RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAI 571 (695)
T ss_dssp SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEE
T ss_pred cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEE
Confidence 12233324778888887654 68999998875433211 11 123444555 667777765 2 4588
Q ss_pred EEeCCCCCC-----CCcceeeeccccceEEEEEEcCCCEEEEeeC--------CCcEEEEEcCCCeEE
Q psy17243 133 IWPTSPQTH-----KDDERFTVSHSEEITCFTVTWDSQYLITGSR--------DMSLKVWQVVGGKLA 187 (392)
Q Consensus 133 ~~d~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------dg~i~i~d~~~~~~~ 187 (392)
+||+.+... .............-.++....++++++.|+. ...+.+||+.+.+-.
T Consensus 572 ~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 572 IFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 999876552 0111100001111122333333677777774 346999999887654
No 343
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.65 E-value=1.6 Score=41.69 Aligned_cols=234 Identities=11% Similarity=0.078 Sum_probs=126.2
Q ss_pred eEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec----ccccceEEEEEecCCCE
Q psy17243 7 LVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK----SHQSTILAVAVLSDSRR 82 (392)
Q Consensus 7 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~ 82 (392)
-+..||..+.+...........|.++.. .++ .|..++.+ -+..+|..+++...... .....|.++....++..
T Consensus 83 Gl~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l 159 (758)
T 3ott_A 83 GILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQI 159 (758)
T ss_dssp EEEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCE
T ss_pred CeEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCE
Confidence 3677887665433211112335777654 345 45666655 58889987665432211 12346888888777765
Q ss_pred EEEEeCCCeEEEEEcCCceeeee-cc-------cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccc
Q psy17243 83 VVTSDKAGVIAVWVADNAQLLYS-AL-------GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEE 154 (392)
Q Consensus 83 l~~~~~d~~i~iwd~~~~~~~~~-~~-------~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 154 (392)
.+ ++.. -+..++..+++.... .. ..+.++....++..|.+|+. +.+..+|..+.... .........
T Consensus 160 Wi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~---~~~~l~~~~ 233 (758)
T 3ott_A 160 YV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIK---QTEAFHNNS 233 (758)
T ss_dssp EE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEE---EEEEEEEEE
T ss_pred EE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEE---eccCCCCCe
Confidence 54 5544 477888877654321 11 13667777777776666764 45788887533211 111112345
Q ss_pred eEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEec-------CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCC
Q psy17243 155 ITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVG-------HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETG 227 (392)
Q Consensus 155 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 227 (392)
|.++....++.+ ..|+.+ -+.+++..+.+....... ....|.++... .++.+ ..|+..| +.++.....
T Consensus 234 i~~i~~d~~g~l-WigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D-~~g~l-WiGT~~G-l~~~~~~~~ 308 (758)
T 3ott_A 234 IKSLALDGNGDL-LAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFAD-QEHNI-WLGTDYG-ISLSRYNSA 308 (758)
T ss_dssp EEEEEECTTCCE-EEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEEC-TTCCE-EEEESSS-EEEECCCC-
T ss_pred EEEEEEcCCCCE-EEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEc-CCCCE-EEEeCCc-ccccccCCc
Confidence 777777766654 445544 588898876543322110 12357888766 44444 4455556 554433211
Q ss_pred ceeeeec-----ccccceeEEEEcCCCeEEEE
Q psy17243 228 GEEHFLA-----GHLGCVTCVKLAGDGTVAMS 254 (392)
Q Consensus 228 ~~~~~~~-----~~~~~v~~~~~~~dg~~~~~ 254 (392)
-...... .....|.++.-..+|.+-+.
T Consensus 309 ~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG 340 (758)
T 3ott_A 309 LQFIPISQITGTGDGNQFYSLFRDSKGFYWFG 340 (758)
T ss_dssp CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE
T ss_pred eeEEecccCCCCCCCceEEEEEEcCCCCEEEe
Confidence 1111110 11235778877777765554
No 344
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.54 E-value=1.2 Score=39.55 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=60.6
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCcee--EEecc------cccceEEEEEecC---CCEEEEEeC------
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVV--STFKS------HQSTILAVAVLSD---SRRVVTSDK------ 88 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~--~~~~~------~~~~v~~~~~~~~---~~~l~~~~~------ 88 (392)
-..-+.|+|.|+|+++++-...+.|.+++..+++.. ..+.. .......|+|+|+ +..|.+...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345679999999987666544357888886655432 22221 2456789999995 555554432
Q ss_pred -------CCeEEEEEcCCc-------eeeee-cc----cceeEEEEeCCCCEEEEec
Q psy17243 89 -------AGVIAVWVADNA-------QLLYS-AL----GPSKCLTVTHNMKYIVSGD 126 (392)
Q Consensus 89 -------d~~i~iwd~~~~-------~~~~~-~~----~~~~~~~~~~~~~~l~~~~ 126 (392)
...|.-++.... +.+.. +. .....+.|.|++.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235655655321 12221 11 2346899999998766644
No 345
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.49 E-value=0.91 Score=37.78 Aligned_cols=160 Identities=10% Similarity=-0.018 Sum_probs=91.2
Q ss_pred CCeEEEEECCCccceeeeccCCcCeeEEEecCCCCeEEEEe----CCCeEEEEeCCCCceeEEecccccceEEEEEecCC
Q psy17243 5 DCLVNVWQMNSHELQSTMEGHLNTVSCVAISPNSIFAVSGS----EDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDS 80 (392)
Q Consensus 5 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (392)
...|+..++...+.. .+... .+..|++++++|+-.. ....|..-+++.. ....+..+.. ..+++++
T Consensus 87 ~~~Iy~i~~dg~~~~-~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g 156 (302)
T 3s25_A 87 RNSLCRIKRNGHGST-VLDPD----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSD 156 (302)
T ss_dssp SEEEEEEETTSCCCE-EEECS----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEET
T ss_pred CCeEEEEeCCCCcce-EeecC----CccEEEEeCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEEC
Confidence 456777777765433 33221 1336778888888665 2345555566533 3344443332 4567788
Q ss_pred CEEEEEeC-CCeEEEEEcCCceeeeecccceeEEEEeCCCCEEEEecCC--CcEEEEeCCCCCCCCcceeeeccccceEE
Q psy17243 81 RRVVTSDK-AGVIAVWVADNAQLLYSALGPSKCLTVTHNMKYIVSGDGD--NSLRIWPTSPQTHKDDERFTVSHSEEITC 157 (392)
Q Consensus 81 ~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--~~i~~~d~~~~~~~~~~~~~~~~~~~v~~ 157 (392)
+.|+-.+. ...|...++..+.......+... ..+.|++.+|+-.... ..|..-++..... ..+. ...+
T Consensus 157 ~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~---~~Lt---~~~~-- 227 (302)
T 3s25_A 157 RYFYYNNPKNGQLYRYDTASQSEALFYDCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP---VVLT---EANI-- 227 (302)
T ss_dssp TEEEEECTTTCCEEEEETTTTEEEEEECSCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC---EECS---CSCE--
T ss_pred CEEEEEeCCCceEEEEECCCCCEEEEeCCCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe---EEEe---CCCc--
Confidence 88876665 57888888877654433333332 3466888888776544 3566666653221 1111 1223
Q ss_pred EEEEcCCCEEEEeeC--CCcEEEEEcCC
Q psy17243 158 FTVTWDSQYLITGSR--DMSLKVWQVVG 183 (392)
Q Consensus 158 ~~~~~~~~~l~~~~~--dg~i~i~d~~~ 183 (392)
..|+|++++|+-+.. .+.|..-++..
T Consensus 228 ~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 228 EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 237888888876532 35666666643
No 346
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.02 E-value=0.96 Score=35.41 Aligned_cols=133 Identities=5% Similarity=-0.159 Sum_probs=76.2
Q ss_pred CCeEEEEeCCCeEEEEeCCCCc------eeEEecc-cccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceee--eeccc
Q psy17243 38 SIFAVSGSEDNTAKVWGLTLGS------VVSTFKS-HQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLL--YSALG 108 (392)
Q Consensus 38 ~~~l~~~~~dg~v~iwd~~~~~------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~ 108 (392)
..+|+....| +++.=....+. ...++.. .=..+..++|+|++.+.++ .+|.++-.+..+.+.. .....
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 3456666666 55554444333 1122221 1236779999999986666 7777776665442111 11111
Q ss_pred c--------eeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCc----ceeeeccccceEEEEEEcCCCEEEEeeCCCcE
Q psy17243 109 P--------SKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDD----ERFTVSHSEEITCFTVTWDSQYLITGSRDMSL 176 (392)
Q Consensus 109 ~--------~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 176 (392)
. -.++.+.+++.+.++ .||.|+-++..+.....- ..+-...=..+..+.+.|+|.+.++. |+.+
T Consensus 81 ~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp EEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred EecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 2 267899999988888 569888776532211110 01111122567999999999766666 7775
Q ss_pred E
Q psy17243 177 K 177 (392)
Q Consensus 177 ~ 177 (392)
+
T Consensus 157 y 157 (236)
T 1tl2_A 157 Y 157 (236)
T ss_dssp E
T ss_pred E
Confidence 4
No 347
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.11 E-value=2.4 Score=35.99 Aligned_cols=145 Identities=10% Similarity=0.056 Sum_probs=75.3
Q ss_pred ceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcc---eeeeccccceEEEEEEcC---CCEEEEe---eCCCcEEEE
Q psy17243 109 PSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDE---RFTVSHSEEITCFTVTWD---SQYLITG---SRDMSLKVW 179 (392)
Q Consensus 109 ~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~---~~~~~~~~~v~~~~~~~~---~~~l~~~---~~dg~i~i~ 179 (392)
....+++.|++.++++--..|.|++++...+...... ............|+++|+ +.+|++. ..++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 4456667777765555444677766654322111000 011123566788999985 4455543 234566667
Q ss_pred EcCCC----------eEE-EEEec-CCCceeEEEEecCCCcEEEEecC-------------CCeEEEEECCCCce-----
Q psy17243 180 QVVGG----------KLA-QVLVG-HTDHVSCVAVAVTNKSLVVSGSK-------------DSNLIVWDMETGGE----- 229 (392)
Q Consensus 180 d~~~~----------~~~-~~~~~-~~~~v~~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~----- 229 (392)
.+..+ +.+ ..+.. .......|+|. +++.+.++.+. .|.|.-.+.. ++.
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg-pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~nP 190 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG-PDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPGNP 190 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC-TTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTTCS
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC-CCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCCCC
Confidence 66541 111 12221 12234568999 56666666432 3445444543 220
Q ss_pred ---eeee-cccccceeEEEEcCCCeEEEEcC
Q psy17243 230 ---EHFL-AGHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 230 ---~~~~-~~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
...+ .+|. ....++|+|+|.+.+...
T Consensus 191 f~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 191 FPGSPVYSYGHR-NVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp STTCCEEEBCCS-BCCEEEECTTCCEEEEEC
T ss_pred CCCCeEEeeCCC-CcceEEECCCCCEEEEec
Confidence 0111 1332 356899999999888875
No 348
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.49 E-value=4.5 Score=34.42 Aligned_cols=59 Identities=15% Similarity=0.207 Sum_probs=38.0
Q ss_pred cceEEEEEEc-------CCCEEEEeeCCCcEEEEEcCCCeEEEE--E-ecCCCceeEEEEecCCCcEEEE
Q psy17243 153 EEITCFTVTW-------DSQYLITGSRDMSLKVWQVVGGKLAQV--L-VGHTDHVSCVAVAVTNKSLVVS 212 (392)
Q Consensus 153 ~~v~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~--~-~~~~~~v~~~~~~~~~~~~l~~ 212 (392)
.....+.|.. +++++++....+.|...++..++.... + ......+..+++. +++.++++
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~-pdG~lyv~ 339 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG-PDGYLYVL 339 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEEC-TTSCEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEEC-CCCcEEEE
Confidence 4567788863 466777766778888888876654432 2 1223478888888 45555554
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.48 E-value=1.3 Score=40.04 Aligned_cols=93 Identities=9% Similarity=-0.015 Sum_probs=61.8
Q ss_pred eEEEEECCC----ccceeeeccCCcCeeEEEecCCCCeEEEEe-CCCeEEEEeCCCC------ce-------eEEecccc
Q psy17243 7 LVNVWQMNS----HELQSTMEGHLNTVSCVAISPNSIFAVSGS-EDNTAKVWGLTLG------SV-------VSTFKSHQ 68 (392)
Q Consensus 7 ~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~------~~-------~~~~~~~~ 68 (392)
.|.|.|... +.....+-.-......+..+|||++++.++ .+.++.++|++.- +. ..+.+ -.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence 366777654 222222222334556789999999887665 5788999998742 11 22333 23
Q ss_pred cceEEEEEecCCCEEEEEeCCCeEEEEEcCCc
Q psy17243 69 STILAVAVLSDSRRVVTSDKAGVIAVWVADNA 100 (392)
Q Consensus 69 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 100 (392)
......+|.++|+...+..-|..|..|++...
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccHH
Confidence 44678899999966667778999999999754
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.20 E-value=9.5 Score=33.85 Aligned_cols=228 Identities=10% Similarity=0.016 Sum_probs=115.4
Q ss_pred cCeeEEEecCCCC-eEEEEeCCCeEEEEeCCCC---ceeEEec---------ccccceEEEEEecC----CCEEEEEeC-
Q psy17243 27 NTVSCVAISPNSI-FAVSGSEDNTAKVWGLTLG---SVVSTFK---------SHQSTILAVAVLSD----SRRVVTSDK- 88 (392)
Q Consensus 27 ~~v~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~---~~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~- 88 (392)
..-+.|+|.|++. .|+++...|.|++++.+.. ..+..+. ........|+|+|+ +...++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457999999986 4556668899999975422 1222221 11456789999996 333333221
Q ss_pred -C----------CeEEEEEcCC----------ceeeeecc-----cceeEEEEeCCCCEEEEecCC--------------
Q psy17243 89 -A----------GVIAVWVADN----------AQLLYSAL-----GPSKCLTVTHNMKYIVSGDGD-------------- 128 (392)
Q Consensus 89 -d----------~~i~iwd~~~----------~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~d-------------- 128 (392)
+ ..|.-|.+.. .+.+.... .....+.|.||+.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~ 173 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLS 173 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcC
Confidence 1 1344455532 12222221 133579999999876665432
Q ss_pred ---CcEEEEeCCCCC------C-----------CCcceeeeccccceEEEEEEcC-----CC-EEEEeeCCC----cEEE
Q psy17243 129 ---NSLRIWPTSPQT------H-----------KDDERFTVSHSEEITCFTVTWD-----SQ-YLITGSRDM----SLKV 178 (392)
Q Consensus 129 ---~~i~~~d~~~~~------~-----------~~~~~~~~~~~~~v~~~~~~~~-----~~-~l~~~~~dg----~i~i 178 (392)
|.|.-.+..... . .....+..+|.. ...++|.|. ++ +++.+...| .-.|
T Consensus 174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN-p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei 252 (463)
T 2wg3_C 174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD-PGRCAVDRHPTDININLTILCSDSNGKNRSSARI 252 (463)
T ss_dssp SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS-CCBEEEESSCSSTTCSEEEEEECC------CEEE
T ss_pred CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC-cceEEECCCCCCcccceEEEecccCCCCCCCCeE
Confidence 335445554310 0 011122223333 456889986 33 455443212 1233
Q ss_pred EEcCCC------eEEEEEecCC-CceeEEEEecC------CCcEEEEecCCCeEEEEECCCCce---eeee-c-------
Q psy17243 179 WQVVGG------KLAQVLVGHT-DHVSCVAVAVT------NKSLVVSGSKDSNLIVWDMETGGE---EHFL-A------- 234 (392)
Q Consensus 179 ~d~~~~------~~~~~~~~~~-~~v~~~~~~~~------~~~~l~~~~~dg~i~iwd~~~~~~---~~~~-~------- 234 (392)
..+..+ .++..+..|. ..+..+.|-.. .+.+|+. ...+.|....++.... ...+ .
T Consensus 253 ~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~-~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~ 331 (463)
T 2wg3_C 253 LQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFG-DRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCR 331 (463)
T ss_dssp EEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEE-ETTSCEEEEEC-----CCEEEEECEEETTSSC
T ss_pred eeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEe-cCCCcEEEEEeCCCCceeeEEEeecCCccccc
Confidence 333322 2344444221 45677777411 1334544 4447766666654321 1122 1
Q ss_pred -ccccceeEEEEcCCCeEEEEcC
Q psy17243 235 -GHLGCVTCVKLAGDGTVAMSDL 256 (392)
Q Consensus 235 -~~~~~v~~~~~~~dg~~~~~~~ 256 (392)
.....+..+...|||.+.+.+.
T Consensus 332 ~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 332 GYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp SCCCSEEEEEEECTTCCEEEEEE
T ss_pred ccccCcceEEEECCCCCEEEEec
Confidence 1235789999999999888864
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.54 E-value=7.6 Score=31.76 Aligned_cols=212 Identities=13% Similarity=0.076 Sum_probs=108.3
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCceee---
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLL--- 103 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--- 103 (392)
..|..++...... ++. . ||.|..|-....-.+..-......|..++.-.+. .++. . ||.|+.|-....-.+
T Consensus 24 ~~i~~ia~G~~h~-~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 24 SGVDAIAGGYFHG-LAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SSCCEEEECSSEE-EEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCCcEEEeCCCeE-EEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 4677777654432 333 4 8999999765432221111123456666664332 2333 4 899999965543221
Q ss_pred eecccceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEcCC
Q psy17243 104 YSALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQVVG 183 (392)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 183 (392)
......+..++...+ ..++-. +|.|+.|-.....+.. ........|..++... .+.+.-. ||.|+.|-...
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGV--YTALAVK-NGGVIAWGDNY 168 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECS--SEEEEEE-TTEEEEEECCT
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEccc--CEEEEEE-CCEEEEecCCC
Confidence 122234555554433 333334 8999999765322221 1112334566665543 2333334 78888887654
Q ss_pred CeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCceeee-ec-------ccccceeEEEEcCCCeEEEEc
Q psy17243 184 GKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGGEEHF-LA-------GHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 184 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~-------~~~~~v~~~~~~~dg~~~~~~ 255 (392)
...+..-......|..++.. ....++. .||.|+.|-......+.. .+ -..+.-..+++. ||++..|+
T Consensus 169 ~gqlg~p~~~~~~v~~i~~G--~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~wG 243 (282)
T 3qhy_B 169 FGQTTVPAEAQSGVDDVAGG--IFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIAWG 243 (282)
T ss_dssp TSTTSCCGGGGSSEEEEEEC--SSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEEES
T ss_pred CCCCCCceecCCCeEEEEec--CCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEEec
Confidence 22111111113456666654 3333443 599999997654221110 00 011122345667 99999998
Q ss_pred CCC
Q psy17243 256 LPP 258 (392)
Q Consensus 256 ~~~ 258 (392)
...
T Consensus 244 ~n~ 246 (282)
T 3qhy_B 244 SSR 246 (282)
T ss_dssp TTC
T ss_pred CCC
Confidence 644
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.30 E-value=9.9 Score=32.75 Aligned_cols=211 Identities=11% Similarity=-0.009 Sum_probs=98.1
Q ss_pred CeEEEEeCCCeEEEEeCCC-CceeEEe--cccccceEEEEEec-CCCEEEEEeCCC----eEEEEEcCCcee---eee--
Q psy17243 39 IFAVSGSEDNTAKVWGLTL-GSVVSTF--KSHQSTILAVAVLS-DSRRVVTSDKAG----VIAVWVADNAQL---LYS-- 105 (392)
Q Consensus 39 ~~l~~~~~dg~v~iwd~~~-~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~----~i~iwd~~~~~~---~~~-- 105 (392)
..|+.+...| +.+++... ++.-..+ ......|.+|++.| +...|.++...| .|...+ +.++. +..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccc
Confidence 3577777777 55555432 2222221 12345699999998 233455554444 343332 22221 111
Q ss_pred -cc-----------cceeEEEEeC-C-CCEEEEecCCCcEEEEeCCCCCCCCcceee---------------eccccceE
Q psy17243 106 -AL-----------GPSKCLTVTH-N-MKYIVSGDGDNSLRIWPTSPQTHKDDERFT---------------VSHSEEIT 156 (392)
Q Consensus 106 -~~-----------~~~~~~~~~~-~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---------------~~~~~~v~ 156 (392)
+. ..+.++++.| + ...++++...+.|...+-............ ......+.
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 11 1345677776 2 556666666666655432211111110000 01123578
Q ss_pred EEEEEcC-CCEEEEeeCCCcEEEEEcCCCeEEEEEec-----C--------CCceeEEEEecCCCcEEEEecCCCeEEEE
Q psy17243 157 CFTVTWD-SQYLITGSRDMSLKVWQVVGGKLAQVLVG-----H--------TDHVSCVAVAVTNKSLVVSGSKDSNLIVW 222 (392)
Q Consensus 157 ~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~--------~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 222 (392)
+|.+.|. ...|+.+..++.|...+ ..++.-..+.. + ...+.++++.|.+...|+.+...+ |...
T Consensus 181 ~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s 258 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRM 258 (394)
T ss_dssp EEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEE
T ss_pred EEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEe
Confidence 8888873 44555555455444432 22222222210 0 124788999866556666665444 4444
Q ss_pred ECCCCceeeeecc--cc---cceeEEEEcC--CCeEEEE
Q psy17243 223 DMETGGEEHFLAG--HL---GCVTCVKLAG--DGTVAMS 254 (392)
Q Consensus 223 d~~~~~~~~~~~~--~~---~~v~~~~~~~--dg~~~~~ 254 (392)
+- .++.-..+.. .. ..+..+.++| .+.+.+.
T Consensus 259 ~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 259 DR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp ET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 32 2332222221 11 2345677765 3444443
No 353
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=89.26 E-value=8.9 Score=32.17 Aligned_cols=157 Identities=9% Similarity=0.014 Sum_probs=93.4
Q ss_pred CcCeeEEEecC---CCCeEEEEeCCCeEEEEeCCCCc-------eeEEecccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy17243 26 LNTVSCVAISP---NSIFAVSGSEDNTAKVWGLTLGS-------VVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVW 95 (392)
Q Consensus 26 ~~~v~~~~~~~---~~~~l~~~~~dg~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 95 (392)
...|.++..-+ +..+++..+.+|.++--.+.... ....++. ...+..+........|+..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 34565554433 46789999999999998765422 2223332 4456666666666789999999999888
Q ss_pred EcC--Cceee---------eecc--cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCC-----Ccceeee-ccccceE
Q psy17243 96 VAD--NAQLL---------YSAL--GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHK-----DDERFTV-SHSEEIT 156 (392)
Q Consensus 96 d~~--~~~~~---------~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-----~~~~~~~-~~~~~v~ 156 (392)
... .-... ..+. ..+..+...+++..++..+..|.++.-.+...... ....... .....+.
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv 252 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLV 252 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEE
T ss_pred ECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEE
Confidence 877 32211 1111 23444444456678999999999988776432211 1111111 1133455
Q ss_pred EEEEEcCCCEEEEeeCCCcEEEEEcCC
Q psy17243 157 CFTVTWDSQYLITGSRDMSLKVWQVVG 183 (392)
Q Consensus 157 ~~~~~~~~~~l~~~~~dg~i~i~d~~~ 183 (392)
.+....+...++..+.+|.+..++...
T Consensus 253 ~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 253 GALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 544444455677777788877777643
No 354
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=88.33 E-value=9.2 Score=31.17 Aligned_cols=195 Identities=11% Similarity=0.043 Sum_probs=108.8
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEe---CCCCceeEEecccccceEEEEEec--CCCEEEEEeCCCeEEEEEcCCce
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWG---LTLGSVVSTFKSHQSTILAVAVLS--DSRRVVTSDKAGVIAVWVADNAQ 101 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd---~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~ 101 (392)
+.+..+.-.....+|+.-+.+|.++--. +..+.....+. ....|..+.. + +..+++..+.+|.++...+....
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 4555555555555666666788766543 33222111133 3556666644 4 46789999999999999876542
Q ss_pred ------eeeecc--cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCC-----CcceeeeccccceEEEEEEcCCCEEE
Q psy17243 102 ------LLYSAL--GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHK-----DDERFTVSHSEEITCFTVTWDSQYLI 168 (392)
Q Consensus 102 ------~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~ 168 (392)
....+. ..+..+........++..+..|.+..+....-... ............|..+...+++..++
T Consensus 102 ~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll 181 (276)
T 3no0_A 102 YKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLL 181 (276)
T ss_dssp TCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEE
T ss_pred hhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEE
Confidence 111111 12333334445567888889999888865421111 11111123345666666666677888
Q ss_pred EeeCCCcEEEEEcCCC-------eEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEE--EECC
Q psy17243 169 TGSRDMSLKVWQVVGG-------KLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIV--WDME 225 (392)
Q Consensus 169 ~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i--wd~~ 225 (392)
..+..|.++...+..- +-+..+ ...+.+..+... .++..++..+.+|.+.. ++..
T Consensus 182 ~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~-~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 182 VITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPI-KEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEE-SSEEEEEEEETTSCEEEEEEEGG
T ss_pred EEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEe-CCCCEEEEEcCCCeEEEeeeCHH
Confidence 8899999998887432 122222 223444444333 33344455556676666 6654
No 355
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=85.96 E-value=16 Score=31.43 Aligned_cols=214 Identities=8% Similarity=-0.034 Sum_probs=99.4
Q ss_pred CeeEEEecC-C-CCeEEEEeCCCeEEEEeCCCCceeEEecc-------------------cccceEEEEEecC-CCEEEE
Q psy17243 28 TVSCVAISP-N-SIFAVSGSEDNTAKVWGLTLGSVVSTFKS-------------------HQSTILAVAVLSD-SRRVVT 85 (392)
Q Consensus 28 ~v~~~~~~~-~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~~~~-~~~l~~ 85 (392)
.|.++++.| + ...|..+...+.|...+ +.++.-..+.. ....+.+|.+.|. ...|+.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 477899987 2 45566665566555443 23333222211 1235788999874 345555
Q ss_pred EeCCCeEEEEEcCCceeeeec----------------ccceeEEEEeCC-CCEEEEecCCCcEEEEeCCCCCCCCcceee
Q psy17243 86 SDKAGVIAVWVADNAQLLYSA----------------LGPSKCLTVTHN-MKYIVSGDGDNSLRIWPTSPQTHKDDERFT 148 (392)
Q Consensus 86 ~~~d~~i~iwd~~~~~~~~~~----------------~~~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 148 (392)
+..++.|...+- .++..... ...+.++.++|. ...++++...+ |...+-... ........
T Consensus 195 g~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~G~-tW~~~~~~ 271 (394)
T 3b7f_A 195 GMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRREG-VWKRIGDA 271 (394)
T ss_dssp EEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETTTT-EEECGGGG
T ss_pred EECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCCCC-cceECCCC
Confidence 554444443321 12211111 023677888885 45677766544 444432211 11111100
Q ss_pred ecc--ccceEEEEEEcC-CCEEEEeeC-----------CCcEEEEEcCCC-eEEEEEe-cCCC-------ceeEEEEecC
Q psy17243 149 VSH--SEEITCFTVTWD-SQYLITGSR-----------DMSLKVWQVVGG-KLAQVLV-GHTD-------HVSCVAVAVT 205 (392)
Q Consensus 149 ~~~--~~~v~~~~~~~~-~~~l~~~~~-----------dg~i~i~d~~~~-~~~~~~~-~~~~-------~v~~~~~~~~ 205 (392)
... ...+.++.+.|. ...|+++.. ++...+|...++ +.-..+. +-.. ....++++|.
T Consensus 272 l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~ 351 (394)
T 3b7f_A 272 MPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAH 351 (394)
T ss_dssp SCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCS
T ss_pred CCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCC
Confidence 011 023566777763 344555432 233456655442 2222221 1111 1135778765
Q ss_pred CCcEEEEecCCCeEEEEECCCCceeeeecccccceeEEEEc
Q psy17243 206 NKSLVVSGSKDSNLIVWDMETGGEEHFLAGHLGCVTCVKLA 246 (392)
Q Consensus 206 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 246 (392)
+...|+.++.++.|..-+ +.++.-..+..+...+.++.|.
T Consensus 352 ~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 352 APVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp SSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 555556666566554432 2343333333333456666553
No 356
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=85.08 E-value=17 Score=31.12 Aligned_cols=157 Identities=5% Similarity=-0.024 Sum_probs=89.2
Q ss_pred CeEEEEECCCc--cceeeecc------CCcCeeEEEec---CC----CCeEEEE-eCCCeEEEEeCCCCceeEEeccccc
Q psy17243 6 CLVNVWQMNSH--ELQSTMEG------HLNTVSCVAIS---PN----SIFAVSG-SEDNTAKVWGLTLGSVVSTFKSHQS 69 (392)
Q Consensus 6 g~i~vwd~~~~--~~~~~~~~------h~~~v~~~~~~---~~----~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~ 69 (392)
-.|.+||+.+. ++++.+.- ....+..+.+. |+ +.++..+ +..+-|.|+|+.+++.-+.+. ..
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~--~~ 200 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH--PT 200 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC--GG
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc--CC
Confidence 36889999999 88877643 23457788877 22 3344433 346789999999998876663 21
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEcCCceeeeecccceeEEEEeCC----CCEEEEecCCC-cEEEEe---CCCCCC
Q psy17243 70 TILAVAVLSDSRRVVTSDKAGVIAVWVADNAQLLYSALGPSKCLTVTHN----MKYIVSGDGDN-SLRIWP---TSPQTH 141 (392)
Q Consensus 70 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~d~-~i~~~d---~~~~~~ 141 (392)
|.|+....++. +|.-. .....+..++++|+ ++.|+.....+ .+.-.. ++....
T Consensus 201 ------~~pd~~~~~~i--~G~~~-----------~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~ 261 (381)
T 3q6k_A 201 ------FKAERPTKFDY--GGKEY-----------EFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGG 261 (381)
T ss_dssp ------GSCCSCEEEEE--TTEEE-----------EECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTC
T ss_pred ------CccccCcceEE--CCEEe-----------EeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcch
Confidence 23331111111 12111 13356778888887 67777666554 333222 111111
Q ss_pred CCcceeeecc--ccceEEEEEE-cCCCEEEEeeCCCcEEEEEcCC
Q psy17243 142 KDDERFTVSH--SEEITCFTVT-WDSQYLITGSRDMSLKVWQVVG 183 (392)
Q Consensus 142 ~~~~~~~~~~--~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~ 183 (392)
....+..... ...-..+++. .+|.++++--....|..|+..+
T Consensus 262 ~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 262 KLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred hhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 2222222111 1333455665 5677777777788999999875
No 357
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=84.70 E-value=16 Score=30.37 Aligned_cols=189 Identities=9% Similarity=0.023 Sum_probs=109.9
Q ss_pred cCCCCeEEEEeCCCeEEEEeCCCCcee-------E--EecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCCc-----
Q psy17243 35 SPNSIFAVSGSEDNTAKVWGLTLGSVV-------S--TFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNA----- 100 (392)
Q Consensus 35 ~~~~~~l~~~~~dg~v~iwd~~~~~~~-------~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----- 100 (392)
-++..++++.+.+|.|+--.+...+.. . .++ ....+..+........++..+..|.++-.....-
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 356678889999999998866533221 1 122 2344556666666778888899998887765321
Q ss_pred ----eeee---ecc--cceeEEEEeC---CCCEEEEecCCCcEEEEeCCCCCCC---CcceeeeccccceEEEEEEcCCC
Q psy17243 101 ----QLLY---SAL--GPSKCLTVTH---NMKYIVSGDGDNSLRIWPTSPQTHK---DDERFTVSHSEEITCFTVTWDSQ 165 (392)
Q Consensus 101 ----~~~~---~~~--~~~~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~ 165 (392)
..+. .+. ..+..+...+ +..+++..+..|.++...+...... ............+..+.......
T Consensus 84 ~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 84 ASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred cCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 1110 111 1233332222 4667888899999988876532211 11111222355666666655566
Q ss_pred EEEEeeCCCcEEEEEcCCC---------eEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECCC
Q psy17243 166 YLITGSRDMSLKVWQVVGG---------KLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 166 ~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 226 (392)
.++..+.+|.+..+....- .....+. ....|..+... .++..+++.+..|..+...+..
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v-~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSV-KENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEEC-TTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEE-CCCCeEEEEECCCceEEEEHHH
Confidence 7888889999999987531 1112222 23455555554 3445567778888888888753
No 358
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.60 E-value=36 Score=33.51 Aligned_cols=39 Identities=18% Similarity=0.163 Sum_probs=33.6
Q ss_pred cceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe
Q psy17243 153 EEITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV 191 (392)
Q Consensus 153 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 191 (392)
..+.+++..++..++++-+.|+++++|++.+++++....
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 356777788888999999999999999999999887753
No 359
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=75.99 E-value=37 Score=29.12 Aligned_cols=249 Identities=10% Similarity=0.061 Sum_probs=135.3
Q ss_pred CCeEEEEECCCccce--eeeccCCcCeeEEEe-cCCCCeEEEEeC--C---CeEEEEeCC--------CCceeEEecc--
Q psy17243 5 DCLVNVWQMNSHELQ--STMEGHLNTVSCVAI-SPNSIFAVSGSE--D---NTAKVWGLT--------LGSVVSTFKS-- 66 (392)
Q Consensus 5 dg~i~vwd~~~~~~~--~~~~~h~~~v~~~~~-~~~~~~l~~~~~--d---g~v~iwd~~--------~~~~~~~~~~-- 66 (392)
+..++-|..-...-+ ..+.....-.+.++. +.+++.+++--. + -++-..+.. ++..+.-+..
T Consensus 2 ~~~~~~Wk~ld~~ai~~g~y~p~n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~ 81 (381)
T 3q6k_A 2 DTQGYKWKQLLYNNVTPGSYNPDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHK 81 (381)
T ss_dssp CCEEEEESSCCBTTSCTTSSCGGGCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCS
T ss_pred cceEEEEEeeccccccCCCcccCccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCc
Confidence 445667754333211 112222334467888 678877776533 2 244444432 1122144432
Q ss_pred ---cccceEEEEEecCCCEEEEEeC---------------CCeEEEEEcCCc--eeeeeccc---------ceeEEEEe-
Q psy17243 67 ---HQSTILAVAVLSDSRRVVTSDK---------------AGVIAVWVADNA--QLLYSALG---------PSKCLTVT- 116 (392)
Q Consensus 67 ---~~~~v~~~~~~~~~~~l~~~~~---------------d~~i~iwd~~~~--~~~~~~~~---------~~~~~~~~- 116 (392)
+--.|..+...+.+++-+.=+. .-.|.+||+.+. +.++.+.- ....+.+.
T Consensus 82 ~~~~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~ 161 (381)
T 3q6k_A 82 TGKELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDV 161 (381)
T ss_dssp SSCSSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEE
T ss_pred cccceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEec
Confidence 1234777777776654432111 125889999999 88765543 23456666
Q ss_pred --CC----CCEEEEec-CCCcEEEEeCCCCCCCCcce----------eee-c----cccceEEEEEEcC----CCEEEEe
Q psy17243 117 --HN----MKYIVSGD-GDNSLRIWPTSPQTHKDDER----------FTV-S----HSEEITCFTVTWD----SQYLITG 170 (392)
Q Consensus 117 --~~----~~~l~~~~-~d~~i~~~d~~~~~~~~~~~----------~~~-~----~~~~v~~~~~~~~----~~~l~~~ 170 (392)
+. +.+++.+. ....|.+||+.+++...... +.. + -...+..|+++|+ ++.|+-.
T Consensus 162 ~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~ 241 (381)
T 3q6k_A 162 ANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYL 241 (381)
T ss_dssp SCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEE
T ss_pred ccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEE
Confidence 22 34555544 46789999998654322110 000 0 1246888999997 6777776
Q ss_pred eCCCcEEEEEcC-----CC---eEEEEEecCC---CceeEEEEecCCCcEEEEecCCCeEEEEECCC-C---ceeeeec-
Q psy17243 171 SRDMSLKVWQVV-----GG---KLAQVLVGHT---DHVSCVAVAVTNKSLVVSGSKDSNLIVWDMET-G---GEEHFLA- 234 (392)
Q Consensus 171 ~~dg~i~i~d~~-----~~---~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~---~~~~~~~- 234 (392)
...+. ++|.+. +. ..++.+ +.. .....+++.+.++.++++--..+.|..|+..+ . +....+.
T Consensus 242 plss~-~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~ 319 (381)
T 3q6k_A 242 AGSAI-KVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT 319 (381)
T ss_dssp ESSCS-EEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEE
T ss_pred ECCCC-cEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEE
Confidence 65542 444442 21 122222 222 22334556546788888888889999999875 1 1122221
Q ss_pred -ccccceeEEEEcCCCeEEEEc
Q psy17243 235 -GHLGCVTCVKLAGDGTVAMSD 255 (392)
Q Consensus 235 -~~~~~v~~~~~~~dg~~~~~~ 255 (392)
..-.....+.+.++|.+-+..
T Consensus 320 d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 320 SSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CTTCCSEEEEEECTTSCEEEEE
T ss_pred CCCccccCeEEECCCCeEEEEE
Confidence 122357788888888866654
No 360
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.09 E-value=5.4 Score=39.19 Aligned_cols=39 Identities=26% Similarity=0.180 Sum_probs=33.5
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK 65 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 65 (392)
..+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 356778888888899999999999999999999887654
No 361
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=73.81 E-value=61 Score=30.61 Aligned_cols=222 Identities=10% Similarity=0.105 Sum_probs=112.8
Q ss_pred CccCCeEEEEECCCccceee-eccCCc--------CeeEEEecCCCCeEEEE----------eCCCeEEEEeCCCCc--e
Q psy17243 2 GGMDCLVNVWQMNSHELQST-MEGHLN--------TVSCVAISPNSIFAVSG----------SEDNTAKVWGLTLGS--V 60 (392)
Q Consensus 2 g~~dg~i~vwd~~~~~~~~~-~~~h~~--------~v~~~~~~~~~~~l~~~----------~~dg~v~iwd~~~~~--~ 60 (392)
|++-..|+++|+.+++.+.. +. ... ....++|..+..++++. +....|+.|.+-+.. -
T Consensus 152 G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~ 230 (711)
T 4hvt_A 152 GKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKA 230 (711)
T ss_dssp TCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGC
T ss_pred CCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHC
Confidence 55667899999999887642 22 111 11344776444444432 123568888876542 2
Q ss_pred eEEecccccce-EEEEEecCCC-----EEEEEeCC---CeEEEEEcCC--ceeeeecccceeEEEEeCCCCEEEEe----
Q psy17243 61 VSTFKSHQSTI-LAVAVLSDSR-----RVVTSDKA---GVIAVWVADN--AQLLYSALGPSKCLTVTHNMKYIVSG---- 125 (392)
Q Consensus 61 ~~~~~~~~~~v-~~~~~~~~~~-----~l~~~~~d---~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~---- 125 (392)
...+.+....+ .....+++++ .+++.+.+ ..+.+.+... ++........-..+..+.++.+++..
T Consensus 231 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 310 (711)
T 4hvt_A 231 KKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDATLQGSFKEYVFWLLRSDW 310 (711)
T ss_dssp EEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCEEEEEETTEEEEECSSCE
T ss_pred eEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcceEeeeECCEEEEEECccc
Confidence 22333222232 3344455655 24443322 3456666553 33222111111222334455544432
Q ss_pred ------cCCCcEEEEeCCCCCC----CCcce--eeeccccceEEEEEEcCCCEEEEeeCCC--cEEEEEcCCCe-EEEE-
Q psy17243 126 ------DGDNSLRIWPTSPQTH----KDDER--FTVSHSEEITCFTVTWDSQYLITGSRDM--SLKVWQVVGGK-LAQV- 189 (392)
Q Consensus 126 ------~~d~~i~~~d~~~~~~----~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~-~~~~- 189 (392)
...+.|...++..... ..... +.......+..+.+..+ .++++...++ .+.++|+.+++ ....
T Consensus 311 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~ 389 (711)
T 4hvt_A 311 KFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVV 389 (711)
T ss_dssp EETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEE
T ss_pred ccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEec
Confidence 2467788898865321 11122 22234456777888755 5666666666 46777776664 2233
Q ss_pred Eec-CCCceeEEEEecCCCcEEEEecC---CCeEEEEECC
Q psy17243 190 LVG-HTDHVSCVAVAVTNKSLVVSGSK---DSNLIVWDME 225 (392)
Q Consensus 190 ~~~-~~~~v~~~~~~~~~~~~l~~~~~---dg~i~iwd~~ 225 (392)
+.- ..+.+......+..+.++++.+. -+.+..+|+.
T Consensus 390 i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 390 LKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp ECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred cCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 221 12455555555455566665543 3568888876
No 362
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=69.13 E-value=45 Score=27.07 Aligned_cols=155 Identities=7% Similarity=0.034 Sum_probs=89.9
Q ss_pred CcCeeEEEecC-CCCeEEEEeCCCeEEEEeCCCCc------eeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcC
Q psy17243 26 LNTVSCVAISP-NSIFAVSGSEDNTAKVWGLTLGS------VVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVAD 98 (392)
Q Consensus 26 ~~~v~~~~~~~-~~~~l~~~~~dg~v~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 98 (392)
...|..+.... +..+++..+.+|.++-..+.... ....++ ....+..+........++..+..|.+..+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 45566664421 46789999999999999875532 112233 23456666666566789999999999888764
Q ss_pred Cceee---------eecc--cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCCC----cceeeeccccceEEEEEEcC
Q psy17243 99 NAQLL---------YSAL--GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHKD----DERFTVSHSEEITCFTVTWD 163 (392)
Q Consensus 99 ~~~~~---------~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~----~~~~~~~~~~~v~~~~~~~~ 163 (392)
.-... ..+. ..+..+...+++..++..+..|.++...+....... -.... .....+..+....+
T Consensus 146 eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~ 224 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE 224 (276)
T ss_dssp GSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS
T ss_pred hCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC
Confidence 32221 1111 233444444556788889999999888764322111 11111 22344444433333
Q ss_pred CCEEEEeeCCCcEEE--EEcC
Q psy17243 164 SQYLITGSRDMSLKV--WQVV 182 (392)
Q Consensus 164 ~~~l~~~~~dg~i~i--~d~~ 182 (392)
...++..+.+|.+.. ++..
T Consensus 225 ~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 225 EVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEEEETTSCEEEEEEEGG
T ss_pred CCEEEEEcCCCeEEEeeeCHH
Confidence 345666666777666 6654
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=67.20 E-value=26 Score=32.90 Aligned_cols=36 Identities=28% Similarity=0.489 Sum_probs=29.0
Q ss_pred eEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEec
Q psy17243 155 ITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLVG 192 (392)
Q Consensus 155 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 192 (392)
|.++. .+..++++-+.|.++++|++++++++....-
T Consensus 224 Is~~~--~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKL--FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEE--ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEec--cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 44443 3578999999999999999999998877653
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.17 E-value=5.9 Score=39.88 Aligned_cols=38 Identities=24% Similarity=0.151 Sum_probs=32.1
Q ss_pred CeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEec
Q psy17243 28 TVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFK 65 (392)
Q Consensus 28 ~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 65 (392)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566677788899999999999999999999987754
No 365
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=64.50 E-value=76 Score=28.07 Aligned_cols=106 Identities=5% Similarity=-0.003 Sum_probs=50.6
Q ss_pred ceeEEEEeCCCC-EEEEecCCCcEEEEeCCCCCCCCcce-e---ee-----ccccceEEEEEEcC---CCEEEEee-C--
Q psy17243 109 PSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQTHKDDER-F---TV-----SHSEEITCFTVTWD---SQYLITGS-R-- 172 (392)
Q Consensus 109 ~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~-~---~~-----~~~~~v~~~~~~~~---~~~l~~~~-~-- 172 (392)
....|++.|++. .++++...|.|++++.........+. . .. ........|+|+|+ ..+|++.. .
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 345666666664 44455566777776543211111100 0 00 12456778888886 23443332 1
Q ss_pred C----------CcEEEEEcCC----------CeEEEEEe--cCCCceeEEEEecCCCcEEEEecC
Q psy17243 173 D----------MSLKVWQVVG----------GKLAQVLV--GHTDHVSCVAVAVTNKSLVVSGSK 215 (392)
Q Consensus 173 d----------g~i~i~d~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~ 215 (392)
+ ..|.-|.+.. .+.+..+. ........|+|.| ++.+.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCC
Confidence 1 1344455532 12333332 1223457899994 5666665543
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.44 E-value=36 Score=31.23 Aligned_cols=58 Identities=7% Similarity=0.078 Sum_probs=39.5
Q ss_pred eeEEEecCCCCeEEEEeCC------------CeEEEEeCCCCceeEEeccc-ccceEEEEEecCCCEEEEE
Q psy17243 29 VSCVAISPNSIFAVSGSED------------NTAKVWGLTLGSVVSTFKSH-QSTILAVAVLSDSRRVVTS 86 (392)
Q Consensus 29 v~~~~~~~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 86 (392)
.-.|+|+|.|.+++.-..+ ..+.+.+..+++....+..+ ...++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4668999999866554322 24556666777766655543 4578889999998877664
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=60.53 E-value=15 Score=34.38 Aligned_cols=37 Identities=16% Similarity=0.435 Sum_probs=29.8
Q ss_pred CeeEEEecCCCCeEEEEeCCCeEEEEeCCCCceeEEecc
Q psy17243 28 TVSCVAISPNSIFAVSGSEDNTAKVWGLTLGSVVSTFKS 66 (392)
Q Consensus 28 ~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 66 (392)
.|.++.+ +..++++-+.|.++|+|++.+++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555544 467999999999999999999998877654
No 368
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=56.33 E-value=73 Score=29.11 Aligned_cols=60 Identities=7% Similarity=0.091 Sum_probs=39.1
Q ss_pred cCeeEEEecCCCCeEEEEeC------------CCeEEEEeCCCCceeEEeccc-ccceEEEEEecCCCEEEEE
Q psy17243 27 NTVSCVAISPNSIFAVSGSE------------DNTAKVWGLTLGSVVSTFKSH-QSTILAVAVLSDSRRVVTS 86 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~------------dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 86 (392)
.....|.|.++|.+.+.... ...|..++..+++....+... ...++.++|+||++.|++.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 34567889999876653221 125666676677765555432 3567888888888877765
No 369
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.32 E-value=49 Score=30.38 Aligned_cols=60 Identities=17% Similarity=0.200 Sum_probs=42.1
Q ss_pred eeEEEEecCCCcEEEEecCC------------CeEEEEECCCCceeeeeccc-ccceeEEEEcCCCeEEEEcCC
Q psy17243 197 VSCVAVAVTNKSLVVSGSKD------------SNLIVWDMETGGEEHFLAGH-LGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 197 v~~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~dg~~~~~~~~ 257 (392)
.-.|+|+ +.+.++++-..+ ..+.+.+..+++....+.++ ...++.++|+||++.+....+
T Consensus 478 PDNL~fd-~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 478 PDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEEEC-TTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CcceEEC-CCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 3568899 566666654322 34666777777776666554 358999999999998887753
No 370
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=55.58 E-value=90 Score=26.04 Aligned_cols=197 Identities=8% Similarity=0.046 Sum_probs=107.1
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEe---CCC------CceeEE---ecccccceEEEEEec---CCCEEEEEeCCCe
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWG---LTL------GSVVST---FKSHQSTILAVAVLS---DSRRVVTSDKAGV 91 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd---~~~------~~~~~~---~~~~~~~v~~~~~~~---~~~~l~~~~~d~~ 91 (392)
+.+..+........|+.-+..|.++-.. +.. |..+.. +. ....|.++...+ +..+++..+..|.
T Consensus 42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 4455544444445566556677665443 332 222211 22 244566665544 4779999999999
Q ss_pred EEEEEcCCceeee-------ecc--cceeEEEEeCCCCEEEEecCCCcEEEEeCC--CCCCC-----Ccceeeeccccce
Q psy17243 92 IAVWVADNAQLLY-------SAL--GPSKCLTVTHNMKYIVSGDGDNSLRIWPTS--PQTHK-----DDERFTVSHSEEI 155 (392)
Q Consensus 92 i~iwd~~~~~~~~-------~~~--~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~--~~~~~-----~~~~~~~~~~~~v 155 (392)
++.-.+....... .+. ..+..+........++..+..|.+..+... .-... ............|
T Consensus 121 iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~V 200 (327)
T 3uc1_A 121 VKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRL 200 (327)
T ss_dssp EEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCE
T ss_pred EEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEE
Confidence 9999876533211 111 223334444455678888889998888765 21111 0111122345567
Q ss_pred EEEEEEcCCCEEEEeeCCCcEEEEEcCCCeE-------EE--EEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECC
Q psy17243 156 TCFTVTWDSQYLITGSRDMSLKVWQVVGGKL-------AQ--VLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDME 225 (392)
Q Consensus 156 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 225 (392)
..+...+++.+++..+..|.++.-.+..-.. +. .+....+.+..+... .+...++..+.+|.+.-++..
T Consensus 201 v~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~-~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 201 LSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIV-DDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEE-CTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEe-CCCccEEEEcCCCeEEEEehh
Confidence 7776666667899999999998887643211 11 121112344444443 233344445556666666554
No 371
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.10 E-value=1.8e+02 Score=29.34 Aligned_cols=38 Identities=18% Similarity=0.159 Sum_probs=31.8
Q ss_pred ceEEEEEEcCCCEEEEeeCCCcEEEEEcCCCeEEEEEe
Q psy17243 154 EITCFTVTWDSQYLITGSRDMSLKVWQVVGGKLAQVLV 191 (392)
Q Consensus 154 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 191 (392)
.+.+++..++..++++-+.|+++++|++.+++++....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34555667788899999999999999999999988753
No 372
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=54.71 E-value=1e+02 Score=26.35 Aligned_cols=217 Identities=13% Similarity=0.079 Sum_probs=109.6
Q ss_pred CeEEEEeCCCeEEEEeCCCC-c----------eeEEecc-cccceEEEEEecCCCEEEEEeCCCeEEEEEcCCcee----
Q psy17243 39 IFAVSGSEDNTAKVWGLTLG-S----------VVSTFKS-HQSTILAVAVLSDSRRVVTSDKAGVIAVWVADNAQL---- 102 (392)
Q Consensus 39 ~~l~~~~~dg~v~iwd~~~~-~----------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---- 102 (392)
...+.-..||.|..|-.... + ....+.. ....+..++.+......+....+|.|+.|-....-.
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g 142 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 142 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSS
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCC
Confidence 34455567899999954321 1 1112221 122355566666667777888899999995432110
Q ss_pred -------eeecc--cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCC------CC---cceeeeccccceEEEEEEcCC
Q psy17243 103 -------LYSAL--GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTH------KD---DERFTVSHSEEITCFTVTWDS 164 (392)
Q Consensus 103 -------~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~------~~---~~~~~~~~~~~v~~~~~~~~~ 164 (392)
..... .....+.+..-....++-..+|.|+.|-.....+ .. +..........|..++.....
T Consensus 143 ~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~ 222 (389)
T 3kci_A 143 NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGD 222 (389)
T ss_dssp SCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSS
T ss_pred CCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCC
Confidence 01111 1112233333445556667788999985432111 00 000111122345666554333
Q ss_pred CEEEEeeCCCcEEEEEcCCC----------eEE-EEEec-CCCceeEEEEecCCCcEEEEecCCCeEEEEECCCCc----
Q psy17243 165 QYLITGSRDMSLKVWQVVGG----------KLA-QVLVG-HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMETGG---- 228 (392)
Q Consensus 165 ~~l~~~~~dg~i~i~d~~~~----------~~~-~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---- 228 (392)
.+.++-..+|.|+.|-.... ... ..+.. ....|..++.. ..+.++-..||.|+.|-.....
T Consensus 223 ~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G---~~hs~alt~~G~v~~wG~n~~GqLG~ 299 (389)
T 3kci_A 223 AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG---SQFSVALTKSGAVYTWGKGDYHRLGH 299 (389)
T ss_dssp CEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE---TTEEEEEETTSCEEEEECCGGGTTCS
T ss_pred cEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC---CCEEEEEeCCCeEEEEeCCCCCCCCC
Confidence 56666778899999964321 111 11111 12246666554 3344445679999999654211
Q ss_pred -------eeeeecccc-cce--------eEEEEcCCCeEEEEcCCC
Q psy17243 229 -------EEHFLAGHL-GCV--------TCVKLAGDGTVAMSDLPP 258 (392)
Q Consensus 229 -------~~~~~~~~~-~~v--------~~~~~~~dg~~~~~~~~~ 258 (392)
....+.... ..| .+++...+|++..|+...
T Consensus 300 g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 300 GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp SSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCT
T ss_pred CCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCC
Confidence 011111111 122 345667789999998644
No 373
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=53.10 E-value=96 Score=25.62 Aligned_cols=156 Identities=9% Similarity=0.045 Sum_probs=88.9
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeCC---CC------ce---eEEecccccceEEEEEec---CCCEEEEEeCCCe
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGLT---LG------SV---VSTFKSHQSTILAVAVLS---DSRRVVTSDKAGV 91 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~------~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~ 91 (392)
+.+..+........++..+..|.++-.... .. .. .-.+. ....|.++...+ +..+++..+..|.
T Consensus 47 D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~ 125 (312)
T 1suu_A 47 DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGK 125 (312)
T ss_dssp CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSE
T ss_pred CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCe
Confidence 334444444445566777778887666543 11 11 01122 234455554443 4678899999999
Q ss_pred EEEEEcCCce-------eeeecc--cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCC-----CCcceeeeccccceEE
Q psy17243 92 IAVWVADNAQ-------LLYSAL--GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTH-----KDDERFTVSHSEEITC 157 (392)
Q Consensus 92 i~iwd~~~~~-------~~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-----~~~~~~~~~~~~~v~~ 157 (392)
++...+.... ....+. ..+-.+........++..+.+|.+..+....-.. .............|..
T Consensus 126 ~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~ 205 (312)
T 1suu_A 126 IARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVK 205 (312)
T ss_dssp EEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEE
T ss_pred EEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEE
Confidence 9998875432 221222 2333344444556788889999998887653111 1111111223455666
Q ss_pred EEEEcCCCEEEEeeCCCcEEEEEcCC
Q psy17243 158 FTVTWDSQYLITGSRDMSLKVWQVVG 183 (392)
Q Consensus 158 ~~~~~~~~~l~~~~~dg~i~i~d~~~ 183 (392)
+....++..+++.+..|......+..
T Consensus 206 ~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 206 VLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEECCCCeEEEEECCCceEEEEHHH
Confidence 65555566788888899999888743
No 374
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=48.37 E-value=1.2e+02 Score=25.27 Aligned_cols=155 Identities=9% Similarity=0.015 Sum_probs=84.5
Q ss_pred cCeeEEEecC---CCCeEEEEeCCCeEEEEeCCCC--------ceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy17243 27 NTVSCVAISP---NSIFAVSGSEDNTAKVWGLTLG--------SVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVW 95 (392)
Q Consensus 27 ~~v~~~~~~~---~~~~l~~~~~dg~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 95 (392)
..|.++...+ ++.+++.++.+|.++--.+... .....+.. .+.+..+........++..+.+|.+..+
T Consensus 92 e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf 170 (323)
T 1wp5_A 92 EEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWF 170 (323)
T ss_dssp CCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEE
T ss_pred CEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 4465543333 2567888999999999877422 22222332 3556666666666788899999999988
Q ss_pred EcCCceee---------eecc--cceeEEEEeCCCC-EEEEecCCCcEEEEeCCCCCCCC-------cceeeeccccceE
Q psy17243 96 VADNAQLL---------YSAL--GPSKCLTVTHNMK-YIVSGDGDNSLRIWPTSPQTHKD-------DERFTVSHSEEIT 156 (392)
Q Consensus 96 d~~~~~~~---------~~~~--~~~~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~-------~~~~~~~~~~~v~ 156 (392)
....-... ..+. ..+..+...+++. .+++.+..|..+..++....... ...........+.
T Consensus 171 ~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~ 250 (323)
T 1wp5_A 171 DESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRIS 250 (323)
T ss_dssp EGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEE
T ss_pred EHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECeeecCCCCceEE
Confidence 77543221 1111 1233443333344 78888888888877765311110 0111111122444
Q ss_pred EEEEEcCCCEEEEeeCCCcEEEEEcC
Q psy17243 157 CFTVTWDSQYLITGSRDMSLKVWQVV 182 (392)
Q Consensus 157 ~~~~~~~~~~l~~~~~dg~i~i~d~~ 182 (392)
.+....++..++..+..|.+..+.+.
T Consensus 251 ~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 251 GFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp EEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred EEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 33333334455566666666655554
No 375
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=47.56 E-value=1.3e+02 Score=25.59 Aligned_cols=191 Identities=9% Similarity=0.083 Sum_probs=111.8
Q ss_pred ecCCCCeEEEEeCCCeEEEEeCCC---------CceeEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCC-----
Q psy17243 34 ISPNSIFAVSGSEDNTAKVWGLTL---------GSVVSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADN----- 99 (392)
Q Consensus 34 ~~~~~~~l~~~~~dg~v~iwd~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~----- 99 (392)
+-|+..++++.+.+|.|+--.+.+ +..-..++ ....+..+........|+..+..|.++-+....
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 457778899999999999765422 22223344 345666666666777888888899887765432
Q ss_pred ----ceeeee---cc--cceeEEE-Ee--CCCCEEEEecCCCcEEEEeCCCCCC---CCcceeeeccccceEEEEEEcCC
Q psy17243 100 ----AQLLYS---AL--GPSKCLT-VT--HNMKYIVSGDGDNSLRIWPTSPQTH---KDDERFTVSHSEEITCFTVTWDS 164 (392)
Q Consensus 100 ----~~~~~~---~~--~~~~~~~-~~--~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~ 164 (392)
|..+.. +. ..+..+. +. .+..+|+.++..|.++...+..... .............+..+......
T Consensus 82 r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 82 SNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGD 161 (370)
T ss_dssp TTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSC
T ss_pred cccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCC
Confidence 222211 11 2333333 32 2456899999999999887643221 11111112234555555555556
Q ss_pred CEEEEeeCCCcEEEEEcCCCe---------EEEEEecCCCceeEEEEecC------------------------------
Q psy17243 165 QYLITGSRDMSLKVWQVVGGK---------LAQVLVGHTDHVSCVAVAVT------------------------------ 205 (392)
Q Consensus 165 ~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~~------------------------------ 205 (392)
..++..+..|.+..|....-. ....+. ....|.++...+.
T Consensus 162 ~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~ 240 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDV 240 (370)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC-----------------------------
T ss_pred ceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEecccccccccccccccccccccccccccccccc
Confidence 678888889988888764311 111121 2344555544421
Q ss_pred ----CCcEEEEecCCCeEEEEECCC
Q psy17243 206 ----NKSLVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 206 ----~~~~l~~~~~dg~i~iwd~~~ 226 (392)
.+..+++.+..|..+...+..
T Consensus 241 ~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 241 ADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp ------CEEEEEETTSEEEEEEGGG
T ss_pred ccccCCceEEEeeCCCCEEEEEHHH
Confidence 345778888999988887653
No 376
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.43 E-value=1.2e+02 Score=27.82 Aligned_cols=61 Identities=15% Similarity=0.182 Sum_probs=41.7
Q ss_pred ceeEEEEecCCCcEEEEecC------------CCeEEEEECCCCceeeeeccc-ccceeEEEEcCCCeEEEEcCC
Q psy17243 196 HVSCVAVAVTNKSLVVSGSK------------DSNLIVWDMETGGEEHFLAGH-LGCVTCVKLAGDGTVAMSDLP 257 (392)
Q Consensus 196 ~v~~~~~~~~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~dg~~~~~~~~ 257 (392)
....|.|. +++.+.++... .+.|..++..+++....+.+. ...++.++|+||++.|.....
T Consensus 477 sPDnL~fd-~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEEC-TTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEEC-CCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 35678898 55666663321 225777777777766555443 357899999999998888764
No 377
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=43.45 E-value=2.2e+02 Score=26.92 Aligned_cols=175 Identities=13% Similarity=0.095 Sum_probs=88.4
Q ss_pred eEEEE-EecCCCEEEEE-eCC----CeEEEEEcCCceeeeecccc-e----------eEEEEeCCCCEEEEec-------
Q psy17243 71 ILAVA-VLSDSRRVVTS-DKA----GVIAVWVADNAQLLYSALGP-S----------KCLTVTHNMKYIVSGD------- 126 (392)
Q Consensus 71 v~~~~-~~~~~~~l~~~-~~d----~~i~iwd~~~~~~~~~~~~~-~----------~~~~~~~~~~~l~~~~------- 126 (392)
...+. ++|++++++.+ +.. ..++++|+.+++.+.....+ . ..++|..+...+++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34455 78898877654 222 37999999999887532111 1 3347764443333321
Q ss_pred ---CCCcEEEEeCCCCCCCCcceeeeccccceEEEEEEcCCCE-----EEEee---CCCcEEEEEcCC--CeEEEEEecC
Q psy17243 127 ---GDNSLRIWPTSPQTHKDDERFTVSHSEEITCFTVTWDSQY-----LITGS---RDMSLKVWQVVG--GKLAQVLVGH 193 (392)
Q Consensus 127 ---~d~~i~~~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~---~dg~i~i~d~~~--~~~~~~~~~~ 193 (392)
....|+.|.+.+........+.......-.....++++++ +++.+ ....+.+.|... ++. ..+...
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 289 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINMP 289 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCSC
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeecC
Confidence 1246888877654333333333222222334445566552 44333 224566666553 332 222211
Q ss_pred CCceeEEEEecCCCcEEEEe----------cCCCeEEEEECCCCc-------eeee-e-cccccceeEEEEcCCC
Q psy17243 194 TDHVSCVAVAVTNKSLVVSG----------SKDSNLIVWDMETGG-------EEHF-L-AGHLGCVTCVKLAGDG 249 (392)
Q Consensus 194 ~~~v~~~~~~~~~~~~l~~~----------~~dg~i~iwd~~~~~-------~~~~-~-~~~~~~v~~~~~~~dg 249 (392)
... .+... .++.+++.. ...+.|.+.++.++. .... + ......+..+.|..+.
T Consensus 290 ~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 361 (711)
T 4hvt_A 290 SDA--TLQGS-FKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDR 361 (711)
T ss_dssp TTC--EEEEE-ETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSC
T ss_pred Ccc--eEeee-ECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCE
Confidence 111 12223 345555532 146779999987642 1222 2 2233467788888764
No 378
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=41.53 E-value=1.3e+02 Score=23.91 Aligned_cols=144 Identities=13% Similarity=0.087 Sum_probs=74.5
Q ss_pred EEEEEeCCCeEEEEEcCCcee--ee-ecccceeEEEEeCCCCEEEEecCCCcEEEEeCCC---CCCCCc---ceeeeccc
Q psy17243 82 RVVTSDKAGVIAVWVADNAQL--LY-SALGPSKCLTVTHNMKYIVSGDGDNSLRIWPTSP---QTHKDD---ERFTVSHS 152 (392)
Q Consensus 82 ~l~~~~~d~~i~iwd~~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~---~~~~~~---~~~~~~~~ 152 (392)
.+++.+.+|.|+--....... +. .-...+..+........++..+..|.++-+.... ...... ........
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~ 83 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPG 83 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCC
Confidence 455667777776655433211 10 1111222333333444566667778766654421 111110 01112334
Q ss_pred cceEEEEEEcCCCEEEEeeCCCcEEEEEcCC-------CeEEEEEecCCCceeEEEEecCCCcEEEEecCCCeEEEEECC
Q psy17243 153 EEITCFTVTWDSQYLITGSRDMSLKVWQVVG-------GKLAQVLVGHTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDME 225 (392)
Q Consensus 153 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 225 (392)
..|..+....++.+|+..+..|.++...+.. +.....+.. .+.+..+...+.++..++..+.+|.+..+.+.
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 5666664434566788889999999988743 222333332 23444444431234456667788988888775
Q ss_pred C
Q psy17243 226 T 226 (392)
Q Consensus 226 ~ 226 (392)
.
T Consensus 163 e 163 (256)
T 1zvt_A 163 D 163 (256)
T ss_dssp G
T ss_pred H
Confidence 3
No 379
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=40.98 E-value=1.7e+02 Score=24.94 Aligned_cols=217 Identities=12% Similarity=0.148 Sum_probs=109.9
Q ss_pred ccCCeEEEEECCCc-c----------ceeeecc-CCcCeeEEEecCCCCeEEEEeCCCeEEEEeCCCC-----------c
Q psy17243 3 GMDCLVNVWQMNSH-E----------LQSTMEG-HLNTVSCVAISPNSIFAVSGSEDNTAKVWGLTLG-----------S 59 (392)
Q Consensus 3 ~~dg~i~vwd~~~~-~----------~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-----------~ 59 (392)
..||.|..|-.... + ....+.. ....+..++.+......+.-..||.|..|-.... .
T Consensus 69 ~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~ 148 (389)
T 3kci_A 69 TADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD 148 (389)
T ss_dssp ETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEE
T ss_pred cCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCc
Confidence 35788888865321 1 1111111 2233455666666666666678999999954321 1
Q ss_pred eeEEeccc-ccceEEEEEecCCCEEEEEeCCCeEEEEEcCCc-e-------------eeeecc-cceeEEEEeCCCCEEE
Q psy17243 60 VVSTFKSH-QSTILAVAVLSDSRRVVTSDKAGVIAVWVADNA-Q-------------LLYSAL-GPSKCLTVTHNMKYIV 123 (392)
Q Consensus 60 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~-------------~~~~~~-~~~~~~~~~~~~~~l~ 123 (392)
....+... ...|..++. .....+....+|.|+.|-.... + .+..+. ..+..++........+
T Consensus 149 ~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~ 226 (389)
T 3kci_A 149 RPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTL 226 (389)
T ss_dssp EEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEE
T ss_pred CCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEE
Confidence 11122211 124555554 3456667778999999964321 1 011111 1233444433335566
Q ss_pred EecCCCcEEEEeCCCCCCC-----C--cceeeec--cccceEEEEEEcCCCEEEEeeCCCcEEEEEcCCC----------
Q psy17243 124 SGDGDNSLRIWPTSPQTHK-----D--DERFTVS--HSEEITCFTVTWDSQYLITGSRDMSLKVWQVVGG---------- 184 (392)
Q Consensus 124 ~~~~d~~i~~~d~~~~~~~-----~--~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------- 184 (392)
+-..+|.|..|-.....+. . ....... ....|..++.. ..+.++-..+|.|+.|-....
T Consensus 227 ~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~ 304 (389)
T 3kci_A 227 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDH 304 (389)
T ss_dssp EEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCC
T ss_pred EEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCcc
Confidence 6678899999854321110 0 0011111 12235555443 345555567899999965321
Q ss_pred e-EEEEEec-CCCceeEEEEecCCCcEEEEecCCCeEEEEECCC
Q psy17243 185 K-LAQVLVG-HTDHVSCVAVAVTNKSLVVSGSKDSNLIVWDMET 226 (392)
Q Consensus 185 ~-~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 226 (392)
. ....+.. ....|..++.. ....++-..||.|+.|=...
T Consensus 305 ~~~P~~v~~l~~~~v~~ia~G---~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 305 VRRPRQVQGLQGKKVIAIATG---SLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp EEEEEECGGGTTCCEEEEEEC---SSEEEEEETTCCEEEEECCT
T ss_pred ccCCeEeccCCCCCEEEEEec---cCeEEEECCCCCEEEeeCCC
Confidence 1 1111111 12345565543 44445557899999997654
No 380
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=38.13 E-value=1.5e+02 Score=23.58 Aligned_cols=143 Identities=9% Similarity=-0.021 Sum_probs=75.6
Q ss_pred eEEEEeCCCeEEEEeCCCCce-eEEecccccceEEEEEecCCCEEEEEeCCCeEEEEEcCC-------ceeee---ecc-
Q psy17243 40 FAVSGSEDNTAKVWGLTLGSV-VSTFKSHQSTILAVAVLSDSRRVVTSDKAGVIAVWVADN-------AQLLY---SAL- 107 (392)
Q Consensus 40 ~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-------~~~~~---~~~- 107 (392)
.+++.+.+|.|+--....... ...++. ...+..+........|+..+..|.++-..... +..+. .+.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC
Confidence 455666777776555432111 112232 33444554444555677778888876664422 22111 111
Q ss_pred -cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCC---CCcceeeeccccceEEEEEE-cCCCEEEEeeCCCcEEEEEcC
Q psy17243 108 -GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTH---KDDERFTVSHSEEITCFTVT-WDSQYLITGSRDMSLKVWQVV 182 (392)
Q Consensus 108 -~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~ 182 (392)
..+..+....++.+++.++..|.++...+..... .............+..+... .++..++..+.+|.+..+.+.
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 1333443324566788899999999887743211 11111111223444444444 345578888888888888875
Q ss_pred C
Q psy17243 183 G 183 (392)
Q Consensus 183 ~ 183 (392)
.
T Consensus 163 e 163 (256)
T 1zvt_A 163 D 163 (256)
T ss_dssp G
T ss_pred H
Confidence 3
No 381
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=36.05 E-value=1.8e+02 Score=23.87 Aligned_cols=219 Identities=8% Similarity=0.037 Sum_probs=0.0
Q ss_pred ccCCeEEEEECCCccceeee--------ccCCcCeeEEEecCCCCeEEEEeCCCeEEEEeC---------CCCceeE---
Q psy17243 3 GMDCLVNVWQMNSHELQSTM--------EGHLNTVSCVAISPNSIFAVSGSEDNTAKVWGL---------TLGSVVS--- 62 (392)
Q Consensus 3 ~~dg~i~vwd~~~~~~~~~~--------~~h~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~---------~~~~~~~--- 62 (392)
+.+|.|+--.+.+.+..+.- ..-.+.+..+........|+..+..|.+.-... ..|..+.
T Consensus 10 T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~i~~~l 89 (307)
T 1zi0_A 10 SHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLL 89 (307)
T ss_dssp ETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEEGGGTS
T ss_pred eCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeEhhhcc
Q ss_pred EecccccceEEEEEe--cCCCEEEEEeCCCeEEEEEcCCceeeee---------cccceeEEEEeCCCCEEEEecCCCcE
Q psy17243 63 TFKSHQSTILAVAVL--SDSRRVVTSDKAGVIAVWVADNAQLLYS---------ALGPSKCLTVTHNMKYIVSGDGDNSL 131 (392)
Q Consensus 63 ~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~d~~i 131 (392)
.+...+.-+..+... +++.+++..+..|.++...+........ -...+-.+........++..+.+|.+
T Consensus 90 ~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~ 169 (307)
T 1zi0_A 90 PLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKV 169 (307)
T ss_dssp CCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEE
T ss_pred CCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcE
Q ss_pred EEEeCCCCCCCCc-----ceeeeccccceEEEEEEcCCCEEEEeeCCCcEEEEEc---------CCCeEEEEEecCCCce
Q psy17243 132 RIWPTSPQTHKDD-----ERFTVSHSEEITCFTVTWDSQYLITGSRDMSLKVWQV---------VGGKLAQVLVGHTDHV 197 (392)
Q Consensus 132 ~~~d~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~---------~~~~~~~~~~~~~~~v 197 (392)
..++...-..... ..........|..+....++..+++.+..|.++-.++ ..|.....+....+.+
T Consensus 170 irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~l 249 (307)
T 1zi0_A 170 VRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLV 249 (307)
T ss_dssp EEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSE
T ss_pred EEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeE
Q ss_pred eEEEEecCCCcEEEEecCCCeEEE
Q psy17243 198 SCVAVAVTNKSLVVSGSKDSNLIV 221 (392)
Q Consensus 198 ~~~~~~~~~~~~l~~~~~dg~i~i 221 (392)
-.+.....+..+++.......+++
T Consensus 250 v~~~~v~~~~~l~~~t~~g~~ir~ 273 (307)
T 1zi0_A 250 VGAVQVDDCDQIMMITDAGTLVRT 273 (307)
T ss_dssp EEEEEECTTCEEEEEESSCCEEEE
T ss_pred EEEEEeCCCceEEEEcCCCcEEEE
No 382
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=30.35 E-value=3.7e+02 Score=25.70 Aligned_cols=146 Identities=11% Similarity=0.063 Sum_probs=73.1
Q ss_pred CcCeeEEEecCC-CCeEEEEeCCCeEEEEeCCCCceeEEeccc-------ccceEEEEEecCC-CEEEEEeCCCe----E
Q psy17243 26 LNTVSCVAISPN-SIFAVSGSEDNTAKVWGLTLGSVVSTFKSH-------QSTILAVAVLSDS-RRVVTSDKAGV----I 92 (392)
Q Consensus 26 ~~~v~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~-~~l~~~~~d~~----i 92 (392)
...|.+|+++|. ...++++...+.|...+ +.|+.-..+..+ ...+.++++.|.. ..++++..... -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999995 45666677667665554 344433333321 2469999999853 44555443211 2
Q ss_pred EEEE-cCCceeeeecc----------c--ceeEEEEeCC-CCEEEEecCCCcEEEEeCCCCCCCCcceeee---ccccce
Q psy17243 93 AVWV-ADNAQLLYSAL----------G--PSKCLTVTHN-MKYIVSGDGDNSLRIWPTSPQTHKDDERFTV---SHSEEI 155 (392)
Q Consensus 93 ~iwd-~~~~~~~~~~~----------~--~~~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---~~~~~v 155 (392)
.||. .+.++.-.... . .+..++++|. .+.++++...+.|.. ....++.-....... .....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCe
Confidence 3332 33333221111 1 2346788774 456666664444322 111111111111000 112457
Q ss_pred EEEEEEcC-CCEEEEeeCC
Q psy17243 156 TCFTVTWD-SQYLITGSRD 173 (392)
Q Consensus 156 ~~~~~~~~-~~~l~~~~~d 173 (392)
..+.+.|. +..++++..+
T Consensus 172 ~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEECTTSTTCEEEEESS
T ss_pred EEEEECCCCCCEEEEEEcC
Confidence 88888874 4466666554
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=25.84 E-value=2e+02 Score=25.76 Aligned_cols=59 Identities=15% Similarity=0.147 Sum_probs=35.8
Q ss_pred CEEEEecCCCcEEEEeCCCCCC-----CCcc-eeee-ccccceEEEEEEcCCCEEEEeeCCCcEEE
Q psy17243 120 KYIVSGDGDNSLRIWPTSPQTH-----KDDE-RFTV-SHSEEITCFTVTWDSQYLITGSRDMSLKV 178 (392)
Q Consensus 120 ~~l~~~~~d~~i~~~d~~~~~~-----~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 178 (392)
..++.|+.+|.|.-.-+..... .... .... ....+|..|.++++..+|++++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 3577788899875443321111 0011 1111 24578899999999999999998775554
No 384
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.63 E-value=1.2e+02 Score=28.40 Aligned_cols=59 Identities=10% Similarity=0.135 Sum_probs=35.3
Q ss_pred CEEEEecCCCcEEEE-eCCCCCCCCcceeeeccccceEEEEEEcCC--CEEEEeeCCCcEEE
Q psy17243 120 KYIVSGDGDNSLRIW-PTSPQTHKDDERFTVSHSEEITCFTVTWDS--QYLITGSRDMSLKV 178 (392)
Q Consensus 120 ~~l~~~~~d~~i~~~-d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i 178 (392)
..++.|+.+|.|.-. ...................+|..|.++++. .+|++++..+.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 367788889987433 332211111111112345688889999887 89999887765544
No 385
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=24.46 E-value=3e+02 Score=22.77 Aligned_cols=156 Identities=6% Similarity=0.023 Sum_probs=86.4
Q ss_pred cCeeEEEecCCCCeEEEEeCCCeEEEEeC---CC------CceeEE---ecccccceEEEEEecC---CCEEEEEeCCCe
Q psy17243 27 NTVSCVAISPNSIFAVSGSEDNTAKVWGL---TL------GSVVST---FKSHQSTILAVAVLSD---SRRVVTSDKAGV 91 (392)
Q Consensus 27 ~~v~~~~~~~~~~~l~~~~~dg~v~iwd~---~~------~~~~~~---~~~~~~~v~~~~~~~~---~~~l~~~~~d~~ 91 (392)
+.+..+........|+..+..|.+.-... .. |.++.. +. ....|.++...++ +.+++.++..|.
T Consensus 39 D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~ 117 (323)
T 1wp5_A 39 DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGM 117 (323)
T ss_dssp CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSE
T ss_pred CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCe
Confidence 34444444444556666677887665543 22 222111 22 2345666544443 568999999999
Q ss_pred EEEEEcCCceee--------eecc--cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCC----C-CcceeeeccccceE
Q psy17243 92 IAVWVADNAQLL--------YSAL--GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTH----K-DDERFTVSHSEEIT 156 (392)
Q Consensus 92 i~iwd~~~~~~~--------~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~----~-~~~~~~~~~~~~v~ 156 (392)
++...+...... ..+. ..+-.+........++..+.+|.+..+....-.. . ............|.
T Consensus 118 iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv 197 (323)
T 1wp5_A 118 VKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIV 197 (323)
T ss_dssp EEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEE
T ss_pred EEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEE
Confidence 999987533221 1121 2223333334556788888889888887642111 1 11111122345566
Q ss_pred EEEEEcCCC-EEEEeeCCCcEEEEEcCC
Q psy17243 157 CFTVTWDSQ-YLITGSRDMSLKVWQVVG 183 (392)
Q Consensus 157 ~~~~~~~~~-~l~~~~~dg~i~i~d~~~ 183 (392)
++...+++. .+++.+..|..+..++..
T Consensus 198 ~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 198 SGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 665544455 788888888888877743
No 386
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=23.30 E-value=2.7e+02 Score=24.83 Aligned_cols=55 Identities=15% Similarity=0.163 Sum_probs=31.6
Q ss_pred eEEEEeCCCeEEEEeCC-CC-------ceeEEecc--cccceEEEEEecCCCEEEEEeCCCeEEE
Q psy17243 40 FAVSGSEDNTAKVWGLT-LG-------SVVSTFKS--HQSTILAVAVLSDSRRVVTSDKAGVIAV 94 (392)
Q Consensus 40 ~l~~~~~dg~v~iwd~~-~~-------~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~i 94 (392)
.+..|..+|.|.-.-+. .+ ..+.++.. ...+|..|.++++..+|++++.++.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46667777776543332 11 12223332 3467778888887778877777765554
No 387
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=21.76 E-value=3.7e+02 Score=22.81 Aligned_cols=156 Identities=10% Similarity=0.066 Sum_probs=85.9
Q ss_pred CcCeeEEEecCCCCeEEEEeCCCeEEEEeC---C------CCceeEE---ecccccceEEEEEec---CCCEEEEEeCCC
Q psy17243 26 LNTVSCVAISPNSIFAVSGSEDNTAKVWGL---T------LGSVVST---FKSHQSTILAVAVLS---DSRRVVTSDKAG 90 (392)
Q Consensus 26 ~~~v~~~~~~~~~~~l~~~~~dg~v~iwd~---~------~~~~~~~---~~~~~~~v~~~~~~~---~~~~l~~~~~d~ 90 (392)
.+.+..+........|+..+..|.+.-+.. . .|..+.. +. ....|.++...+ +..+|+.++..|
T Consensus 45 ~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G 123 (370)
T 3l6v_A 45 EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNG 123 (370)
T ss_dssp CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTS
T ss_pred CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCC
Confidence 445555555555556666667777665543 2 1222211 22 245566655443 456899999999
Q ss_pred eEEEEEcCCcee-------eeecc--cceeEEEEeCCCCEEEEecCCCcEEEEeCCCCCCC-----CcceeeeccccceE
Q psy17243 91 VIAVWVADNAQL-------LYSAL--GPSKCLTVTHNMKYIVSGDGDNSLRIWPTSPQTHK-----DDERFTVSHSEEIT 156 (392)
Q Consensus 91 ~i~iwd~~~~~~-------~~~~~--~~~~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-----~~~~~~~~~~~~v~ 156 (392)
.++...+..... ...+. ...-.+........++..+.+|.+..|+...-... ............|.
T Consensus 124 ~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv 203 (370)
T 3l6v_A 124 TVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVV 203 (370)
T ss_dssp EEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEE
T ss_pred eEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEE
Confidence 999998754322 11111 12233333345557778888888888865421110 01111122345555
Q ss_pred EEEEEc-----------------------------------CCCEEEEeeCCCcEEEEEcC
Q psy17243 157 CFTVTW-----------------------------------DSQYLITGSRDMSLKVWQVV 182 (392)
Q Consensus 157 ~~~~~~-----------------------------------~~~~l~~~~~dg~i~i~d~~ 182 (392)
++...+ ++..+++.+..|..+...+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 204 SLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLA 264 (370)
T ss_dssp EEEEECCC-----------------------------------CEEEEEETTSEEEEEEGG
T ss_pred EEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHH
Confidence 555444 34578888889988888774
Done!