Query psy17244
Match_columns 196
No_of_seqs 128 out of 1156
Neff 7.9
Searched_HMMs 46136
Date Fri Aug 16 17:00:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17244.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17244hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605|consensus 100.0 5.3E-47 1.1E-51 311.6 10.7 183 8-196 64-247 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 2.4E-43 5.2E-48 274.0 15.5 158 32-196 1-158 (162)
3 PF03031 NIF: NLI interacting 100.0 3.3E-39 7.2E-44 249.1 15.5 151 33-195 1-152 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 4.9E-37 1.1E-41 244.0 13.0 142 30-195 19-178 (195)
5 TIGR02250 FCP1_euk FCP1-like p 100.0 1.5E-33 3.3E-38 217.6 14.2 145 29-178 3-155 (156)
6 smart00577 CPDc catalytic doma 100.0 1.2E-30 2.6E-35 199.7 15.2 148 31-183 1-148 (148)
7 KOG2832|consensus 100.0 3.6E-30 7.9E-35 216.7 11.8 142 30-195 187-328 (393)
8 COG5190 FCP1 TFIIF-interacting 99.9 3.3E-27 7.2E-32 203.2 8.3 160 28-196 208-367 (390)
9 KOG0323|consensus 99.8 2.9E-20 6.3E-25 168.3 10.2 142 32-178 146-298 (635)
10 TIGR01685 MDP-1 magnesium-depe 99.2 1.2E-10 2.6E-15 91.4 8.5 156 33-196 3-173 (174)
11 PLN03243 haloacid dehalogenase 99.1 2.1E-10 4.6E-15 95.4 5.3 100 78-178 107-210 (260)
12 TIGR01681 HAD-SF-IIIC HAD-supe 99.0 1.9E-10 4.1E-15 85.8 2.9 110 33-163 1-121 (128)
13 PLN02575 haloacid dehalogenase 99.0 6E-10 1.3E-14 97.1 5.7 99 79-178 215-317 (381)
14 PRK13225 phosphoglycolate phos 98.9 1.5E-09 3.2E-14 91.0 5.9 96 79-175 141-237 (273)
15 PRK13288 pyrophosphatase PpaX; 98.9 1.2E-09 2.7E-14 87.6 4.8 97 78-175 80-180 (214)
16 PRK11587 putative phosphatase; 98.9 2.9E-09 6.3E-14 85.9 6.7 99 78-178 81-183 (218)
17 TIGR01662 HAD-SF-IIIA HAD-supe 98.9 2.2E-09 4.7E-14 79.8 4.6 115 33-173 1-127 (132)
18 COG4996 Predicted phosphatase 98.9 1.1E-08 2.4E-13 75.9 7.9 147 34-189 2-158 (164)
19 PRK10725 fructose-1-P/6-phosph 98.8 2.6E-09 5.5E-14 83.8 4.1 95 79-175 87-184 (188)
20 PRK13226 phosphoglycolate phos 98.8 3.2E-09 6.9E-14 86.4 4.5 96 78-174 93-192 (229)
21 TIGR01684 viral_ppase viral ph 98.8 1.2E-08 2.6E-13 85.7 7.6 125 26-181 120-280 (301)
22 COG0637 Predicted phosphatase/ 98.8 2.5E-09 5.5E-14 86.8 3.2 100 78-178 84-187 (221)
23 PRK10826 2-deoxyglucose-6-phos 98.8 8E-09 1.7E-13 83.4 5.7 100 79-179 91-194 (222)
24 PHA03398 viral phosphatase sup 98.8 3.8E-08 8.3E-13 82.8 9.0 124 28-182 124-283 (303)
25 TIGR00213 GmhB_yaeD D,D-heptos 98.7 1.8E-08 3.8E-13 78.9 5.5 115 33-173 2-146 (176)
26 PLN02940 riboflavin kinase 98.7 1.6E-08 3.5E-13 88.5 3.9 97 79-176 92-193 (382)
27 PRK13223 phosphoglycolate phos 98.7 2.1E-08 4.5E-13 83.9 4.4 94 79-173 100-197 (272)
28 TIGR03351 PhnX-like phosphonat 98.7 3E-08 6.6E-13 79.7 5.1 95 79-173 86-186 (220)
29 cd01427 HAD_like Haloacid deha 98.7 3.1E-08 6.6E-13 72.1 4.7 107 34-164 1-127 (139)
30 TIGR01261 hisB_Nterm histidino 98.7 4.6E-08 1E-12 75.8 5.6 124 33-179 2-149 (161)
31 TIGR01656 Histidinol-ppas hist 98.6 2E-08 4.4E-13 76.3 3.5 117 33-173 1-141 (147)
32 PF12689 Acid_PPase: Acid Phos 98.6 6.2E-08 1.3E-12 75.7 5.6 123 32-163 3-137 (169)
33 PRK10563 6-phosphogluconate ph 98.6 2.5E-08 5.5E-13 80.3 3.5 96 78-176 86-185 (221)
34 TIGR01668 YqeG_hyp_ppase HAD s 98.6 3.7E-08 8E-13 76.9 4.2 129 12-177 5-136 (170)
35 TIGR01686 FkbH FkbH-like domai 98.6 6.6E-08 1.4E-12 82.7 5.9 110 31-163 2-116 (320)
36 PHA02597 30.2 hypothetical pro 98.6 2.6E-08 5.7E-13 78.9 2.6 99 78-178 72-175 (197)
37 PRK08942 D,D-heptose 1,7-bisph 98.5 2.6E-07 5.6E-12 72.5 7.1 117 32-173 3-143 (181)
38 PHA02530 pseT polynucleotide k 98.5 6.4E-08 1.4E-12 81.5 3.2 128 30-176 156-295 (300)
39 TIGR01664 DNA-3'-Pase DNA 3'-p 98.5 9E-07 1.9E-11 68.9 9.1 108 31-160 12-137 (166)
40 TIGR00338 serB phosphoserine p 98.5 1.4E-07 3.1E-12 75.7 4.8 98 79-178 84-195 (219)
41 TIGR01672 AphA HAD superfamily 98.4 2.5E-07 5.5E-12 76.0 3.3 144 27-176 58-210 (237)
42 PRK06769 hypothetical protein; 98.3 3.8E-07 8.2E-12 71.4 3.5 97 79-176 27-136 (173)
43 COG5190 FCP1 TFIIF-interacting 98.3 4.1E-07 9E-12 79.2 4.0 145 28-175 22-172 (390)
44 PF13419 HAD_2: Haloacid dehal 98.3 4.1E-07 8.9E-12 69.2 3.4 95 77-172 74-172 (176)
45 PLN02770 haloacid dehalogenase 98.3 9.6E-07 2.1E-11 72.8 4.6 99 78-177 106-208 (248)
46 PRK14988 GMP/IMP nucleotidase; 98.2 1.3E-06 2.8E-11 71.0 4.5 93 79-172 92-188 (224)
47 COG0546 Gph Predicted phosphat 98.2 1.5E-06 3.3E-11 70.3 4.8 95 79-174 88-186 (220)
48 PF05152 DUF705: Protein of un 98.2 5.6E-06 1.2E-10 69.1 8.0 125 27-181 117-276 (297)
49 KOG3109|consensus 98.2 1.6E-06 3.4E-11 69.8 4.4 89 79-169 99-197 (244)
50 TIGR02253 CTE7 HAD superfamily 98.2 1.8E-06 4E-11 69.2 4.8 98 78-176 92-194 (221)
51 TIGR01489 DKMTPPase-SF 2,3-dik 98.2 4.6E-07 9.9E-12 70.6 1.1 88 79-167 71-179 (188)
52 TIGR01454 AHBA_synth_RP 3-amin 98.2 2E-06 4.4E-11 68.4 4.8 98 78-176 73-174 (205)
53 TIGR01509 HAD-SF-IA-v3 haloaci 98.2 1.5E-06 3.2E-11 67.3 3.7 92 79-172 84-179 (183)
54 PRK09456 ?-D-glucose-1-phospha 98.2 1.5E-06 3.3E-11 69.0 3.7 104 78-181 82-189 (199)
55 PRK09552 mtnX 2-hydroxy-3-keto 98.2 4E-06 8.6E-11 67.7 5.9 95 78-173 72-183 (219)
56 TIGR01428 HAD_type_II 2-haloal 98.1 1.8E-06 4E-11 68.2 3.2 96 79-175 91-190 (198)
57 TIGR01449 PGP_bact 2-phosphogl 98.1 2.5E-06 5.4E-11 67.9 3.9 99 78-177 83-185 (213)
58 TIGR01993 Pyr-5-nucltdase pyri 98.1 1.4E-06 3E-11 68.2 1.8 92 79-173 83-181 (184)
59 PRK05446 imidazole glycerol-ph 98.1 1.8E-05 3.9E-10 68.7 8.7 124 31-177 1-148 (354)
60 TIGR02254 YjjG/YfnB HAD superf 98.1 3.6E-06 7.8E-11 67.4 3.9 96 79-175 96-196 (224)
61 TIGR01670 YrbI-phosphatas 3-de 98.1 4.5E-06 9.7E-11 64.0 4.1 111 33-171 2-113 (154)
62 PRK09449 dUMP phosphatase; Pro 98.0 4.9E-06 1.1E-10 67.0 4.2 94 79-173 94-192 (224)
63 TIGR01663 PNK-3'Pase polynucle 98.0 2E-05 4.4E-10 71.7 7.7 111 30-162 166-296 (526)
64 TIGR02009 PGMB-YQAB-SF beta-ph 98.0 3.5E-06 7.6E-11 65.5 2.2 92 79-173 87-182 (185)
65 PRK11009 aphA acid phosphatase 98.0 2.3E-05 5E-10 64.5 6.6 137 29-173 60-207 (237)
66 TIGR01422 phosphonatase phosph 97.9 8.5E-06 1.9E-10 67.0 4.0 98 79-177 98-201 (253)
67 PRK13582 thrH phosphoserine ph 97.9 8.3E-06 1.8E-10 64.7 3.3 86 78-164 66-158 (205)
68 PLN02954 phosphoserine phospha 97.9 3.2E-05 6.9E-10 62.2 6.2 91 79-171 83-190 (224)
69 TIGR02247 HAD-1A3-hyp Epoxide 97.9 4.8E-06 1E-10 66.5 1.4 100 78-178 92-197 (211)
70 TIGR01691 enolase-ppase 2,3-di 97.8 2.3E-05 5.1E-10 63.7 3.9 100 77-177 92-196 (220)
71 COG1011 Predicted hydrolase (H 97.8 3.9E-05 8.4E-10 61.6 5.1 94 78-172 97-194 (229)
72 PRK13222 phosphoglycolate phos 97.7 2.5E-05 5.3E-10 62.7 3.5 94 78-172 91-188 (226)
73 PRK13478 phosphonoacetaldehyde 97.7 4E-05 8.7E-10 63.7 4.8 99 79-177 100-203 (267)
74 COG2179 Predicted hydrolase of 97.7 3.9E-05 8.5E-10 59.4 4.3 124 18-178 14-142 (175)
75 PRK11133 serB phosphoserine ph 97.7 5.5E-05 1.2E-09 65.0 5.6 96 78-174 179-288 (322)
76 TIGR02252 DREG-2 REG-2-like, H 97.7 3.2E-05 7E-10 61.2 3.7 91 79-171 104-199 (203)
77 PLN02779 haloacid dehalogenase 97.7 4.2E-05 9E-10 64.5 4.4 98 79-177 143-246 (286)
78 PRK08238 hypothetical protein; 97.7 0.0001 2.2E-09 66.5 7.0 90 79-174 71-165 (479)
79 TIGR01548 HAD-SF-IA-hyp1 haloa 97.7 0.00011 2.3E-09 58.2 5.9 81 80-162 106-190 (197)
80 TIGR01990 bPGM beta-phosphoglu 97.7 2.8E-05 6.1E-10 60.4 2.5 93 79-174 86-182 (185)
81 PLN02811 hydrolase 97.6 6.1E-05 1.3E-09 60.7 3.9 98 79-177 77-184 (220)
82 TIGR01689 EcbF-BcbF capsule bi 97.6 0.00026 5.6E-09 52.8 6.7 73 33-130 2-87 (126)
83 PLN02919 haloacid dehalogenase 97.6 9.8E-05 2.1E-09 72.5 5.2 98 81-178 162-263 (1057)
84 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.5 0.00014 2.9E-09 59.7 5.0 96 31-160 7-105 (242)
85 PRK09484 3-deoxy-D-manno-octul 97.5 0.00029 6.2E-09 55.5 6.2 113 30-171 19-133 (183)
86 TIGR01549 HAD-SF-IA-v1 haloaci 97.5 0.00028 6.1E-09 53.3 6.0 81 78-162 62-146 (154)
87 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.4 0.00019 4.2E-09 56.3 4.5 94 79-173 79-186 (201)
88 PTZ00445 p36-lilke protein; Pr 97.4 0.00015 3.3E-09 58.4 3.3 136 27-179 38-207 (219)
89 TIGR02137 HSK-PSP phosphoserin 97.4 0.00023 5E-09 57.1 4.3 81 79-163 67-157 (203)
90 TIGR01493 HAD-SF-IA-v2 Haloaci 97.4 4.8E-05 1E-09 58.8 0.2 77 79-162 89-168 (175)
91 TIGR01533 lipo_e_P4 5'-nucleot 97.3 0.00084 1.8E-08 56.2 6.8 96 30-131 73-173 (266)
92 PRK06698 bifunctional 5'-methy 97.3 0.00023 4.9E-09 63.8 3.5 93 79-174 329-424 (459)
93 COG3882 FkbH Predicted enzyme 97.2 0.00025 5.5E-09 63.2 3.4 134 29-179 219-357 (574)
94 KOG2914|consensus 97.2 0.00043 9.3E-09 56.4 4.5 100 76-175 88-197 (222)
95 PF08645 PNK3P: Polynucleotide 97.2 0.00081 1.8E-08 52.0 5.5 107 33-162 1-130 (159)
96 PF13344 Hydrolase_6: Haloacid 97.1 0.0014 3E-08 46.7 5.4 50 35-116 1-51 (101)
97 COG0560 SerB Phosphoserine pho 97.1 0.0014 3.1E-08 52.9 6.0 84 79-163 76-173 (212)
98 PF09419 PGP_phosphatase: Mito 97.0 0.0021 4.6E-08 50.2 6.5 105 19-161 26-147 (168)
99 TIGR02726 phenyl_P_delta pheny 96.9 0.0016 3.5E-08 50.8 5.0 106 31-163 6-111 (169)
100 PRK00192 mannosyl-3-phosphogly 96.9 0.0024 5.2E-08 53.2 6.2 58 31-119 3-61 (273)
101 PRK10748 flavin mononucleotide 96.9 0.00082 1.8E-08 54.9 3.0 90 79-174 112-205 (238)
102 COG0561 Cof Predicted hydrolas 96.8 0.0035 7.6E-08 51.7 6.4 59 31-120 2-61 (264)
103 TIGR01487 SPP-like sucrose-pho 96.7 0.0046 1E-07 49.5 5.9 56 33-119 2-58 (215)
104 PF08282 Hydrolase_3: haloacid 96.5 0.0031 6.7E-08 50.5 4.1 54 35-119 1-55 (254)
105 TIGR01544 HAD-SF-IE haloacid d 96.5 0.0091 2E-07 50.3 6.8 104 78-182 119-247 (277)
106 PRK01158 phosphoglycolate phos 96.5 0.0082 1.8E-07 48.2 6.4 57 32-119 3-60 (230)
107 PRK03669 mannosyl-3-phosphogly 96.4 0.0067 1.4E-07 50.4 5.7 59 30-119 5-64 (271)
108 TIGR00099 Cof-subfamily Cof su 96.4 0.0073 1.6E-07 49.6 5.6 55 34-119 1-56 (256)
109 TIGR03333 salvage_mtnX 2-hydro 96.4 0.0054 1.2E-07 49.2 4.7 87 78-164 68-170 (214)
110 PRK10530 pyridoxal phosphate ( 96.4 0.011 2.3E-07 48.7 6.6 57 32-119 3-60 (272)
111 PF06888 Put_Phosphatase: Puta 96.4 0.012 2.5E-07 48.5 6.6 52 78-130 69-123 (234)
112 PRK10513 sugar phosphate phosp 96.4 0.0075 1.6E-07 49.8 5.6 57 32-119 3-60 (270)
113 PRK10444 UMP phosphatase; Prov 96.3 0.0088 1.9E-07 49.4 5.8 53 33-117 2-55 (248)
114 COG0241 HisB Histidinol phosph 96.3 0.017 3.7E-07 45.6 6.9 111 31-163 4-135 (181)
115 TIGR02463 MPGP_rel mannosyl-3- 96.3 0.0066 1.4E-07 48.7 4.7 54 35-119 2-56 (221)
116 TIGR02461 osmo_MPG_phos mannos 96.2 0.011 2.4E-07 48.1 5.8 54 34-119 1-55 (225)
117 PLN02645 phosphoglycolate phos 96.2 0.009 1.9E-07 50.9 5.5 54 31-116 27-81 (311)
118 PRK10976 putative hydrolase; P 96.2 0.012 2.7E-07 48.4 6.0 56 33-119 3-59 (266)
119 PRK15126 thiamin pyrimidine py 96.2 0.012 2.6E-07 48.8 5.9 56 33-119 3-59 (272)
120 smart00775 LNS2 LNS2 domain. T 96.1 0.012 2.5E-07 45.4 5.0 63 34-116 1-67 (157)
121 PRK12702 mannosyl-3-phosphogly 96.1 0.017 3.8E-07 49.0 6.3 57 32-119 1-58 (302)
122 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.0 0.015 3.2E-07 48.2 5.4 56 33-116 2-58 (257)
123 TIGR01482 SPP-subfamily Sucros 95.8 0.023 5.1E-07 45.3 5.7 53 35-118 1-54 (225)
124 PRK10187 trehalose-6-phosphate 95.7 0.025 5.4E-07 47.2 5.7 61 31-117 13-75 (266)
125 TIGR01484 HAD-SF-IIB HAD-super 95.7 0.019 4.1E-07 45.3 4.7 54 34-117 1-55 (204)
126 TIGR01452 PGP_euk phosphoglyco 95.6 0.029 6.4E-07 46.9 6.0 43 33-107 3-46 (279)
127 TIGR01486 HAD-SF-IIB-MPGP mann 95.6 0.027 5.8E-07 46.3 5.7 54 35-119 2-56 (256)
128 TIGR01488 HAD-SF-IB Haloacid D 95.5 0.035 7.5E-07 42.5 5.6 50 78-128 71-121 (177)
129 PTZ00174 phosphomannomutase; P 95.5 0.027 5.8E-07 46.3 5.1 53 31-114 4-57 (247)
130 TIGR01456 CECR5 HAD-superfamil 95.5 0.022 4.7E-07 48.8 4.6 53 33-117 1-62 (321)
131 TIGR01457 HAD-SF-IIA-hyp2 HAD- 95.4 0.036 7.9E-07 45.7 5.5 50 33-114 2-52 (249)
132 TIGR01490 HAD-SF-IB-hyp1 HAD-s 95.0 0.043 9.4E-07 43.1 4.8 85 79-164 86-185 (202)
133 COG0647 NagD Predicted sugar p 94.9 0.051 1.1E-06 45.6 5.1 55 31-117 7-62 (269)
134 KOG3120|consensus 94.9 0.04 8.6E-07 44.9 4.2 56 79-135 83-140 (256)
135 PLN02887 hydrolase family prot 94.9 0.049 1.1E-06 50.5 5.3 58 30-118 306-364 (580)
136 TIGR01485 SPP_plant-cyano sucr 94.8 0.056 1.2E-06 44.3 5.0 60 32-119 1-61 (249)
137 TIGR01675 plant-AP plant acid 94.3 0.11 2.4E-06 42.6 5.5 96 29-130 74-172 (229)
138 TIGR01460 HAD-SF-IIA Haloacid 94.3 0.064 1.4E-06 43.8 4.2 48 35-114 1-53 (236)
139 PRK14502 bifunctional mannosyl 94.2 0.13 2.7E-06 48.5 6.4 59 30-119 414-473 (694)
140 PF11019 DUF2608: Protein of u 94.2 0.11 2.4E-06 43.1 5.5 101 78-178 79-210 (252)
141 PF00702 Hydrolase: haloacid d 94.0 0.11 2.3E-06 40.8 5.0 81 76-160 123-205 (215)
142 COG4359 Uncharacterized conser 94.0 0.17 3.7E-06 40.2 5.8 41 79-119 72-113 (220)
143 PLN02423 phosphomannomutase 93.8 0.12 2.7E-06 42.4 5.1 43 32-105 7-49 (245)
144 TIGR01511 ATPase-IB1_Cu copper 93.6 0.2 4.4E-06 46.2 6.6 84 77-171 402-487 (562)
145 KOG3085|consensus 93.4 0.053 1.1E-06 44.6 2.1 95 77-174 111-213 (237)
146 TIGR01548 HAD-SF-IA-hyp1 haloa 93.3 0.042 9.1E-07 43.3 1.4 15 34-48 2-16 (197)
147 COG1877 OtsB Trehalose-6-phosp 93.3 0.16 3.6E-06 42.5 5.0 60 29-114 15-76 (266)
148 PLN02151 trehalose-phosphatase 93.3 0.16 3.5E-06 44.2 5.1 59 30-114 96-154 (354)
149 PLN02580 trehalose-phosphatase 92.8 0.21 4.5E-06 44.0 5.2 61 29-115 116-176 (384)
150 PLN03017 trehalose-phosphatase 92.6 0.24 5.2E-06 43.3 5.3 60 30-115 109-168 (366)
151 TIGR00685 T6PP trehalose-phosp 92.4 0.13 2.8E-06 42.1 3.2 17 31-47 2-18 (244)
152 TIGR02244 HAD-IG-Ncltidse HAD 92.3 0.91 2E-05 39.5 8.4 53 76-128 180-240 (343)
153 TIGR02252 DREG-2 REG-2-like, H 92.1 0.088 1.9E-06 41.4 1.8 16 33-48 1-16 (203)
154 PF03767 Acid_phosphat_B: HAD 92.0 0.19 4.1E-06 41.1 3.7 82 30-117 70-153 (229)
155 TIGR01993 Pyr-5-nucltdase pyri 92.0 0.074 1.6E-06 41.3 1.2 14 34-47 2-15 (184)
156 COG2503 Predicted secreted aci 91.8 0.15 3.3E-06 42.0 2.9 79 28-116 75-160 (274)
157 PRK13478 phosphonoacetaldehyde 91.8 0.09 1.9E-06 43.5 1.6 16 32-47 4-19 (267)
158 TIGR02009 PGMB-YQAB-SF beta-ph 91.7 0.08 1.7E-06 40.8 1.1 16 33-48 2-17 (185)
159 TIGR01422 phosphonatase phosph 91.6 0.11 2.3E-06 42.6 1.8 15 33-47 3-17 (253)
160 TIGR02253 CTE7 HAD superfamily 91.5 0.094 2E-06 41.7 1.4 16 33-48 3-18 (221)
161 PLN02770 haloacid dehalogenase 91.4 0.087 1.9E-06 43.2 1.1 17 32-48 22-38 (248)
162 PRK14988 GMP/IMP nucleotidase; 91.4 0.1 2.2E-06 42.2 1.5 18 30-47 8-25 (224)
163 PRK10748 flavin mononucleotide 91.2 0.11 2.3E-06 42.4 1.4 16 32-47 10-25 (238)
164 PLN02779 haloacid dehalogenase 91.1 0.13 2.7E-06 43.4 1.8 17 31-47 39-55 (286)
165 COG4502 5'(3')-deoxyribonucleo 91.0 0.85 1.8E-05 34.7 5.9 85 79-178 67-155 (180)
166 PRK11590 hypothetical protein; 91.0 0.14 2.9E-06 41.0 1.8 39 79-117 94-134 (211)
167 TIGR01525 ATPase-IB_hvy heavy 90.8 0.45 9.6E-06 43.8 5.2 86 77-171 381-468 (556)
168 TIGR01454 AHBA_synth_RP 3-amin 90.6 0.088 1.9E-06 41.6 0.4 14 35-48 1-14 (205)
169 PRK14501 putative bifunctional 90.5 0.42 9.1E-06 45.5 4.9 62 29-116 489-552 (726)
170 TIGR01549 HAD-SF-IA-v1 haloaci 90.4 0.11 2.4E-06 38.9 0.7 14 34-47 1-14 (154)
171 TIGR01449 PGP_bact 2-phosphogl 89.9 0.11 2.4E-06 41.0 0.4 14 35-48 1-14 (213)
172 TIGR01990 bPGM beta-phosphoglu 89.7 0.13 2.9E-06 39.5 0.7 15 34-48 1-15 (185)
173 TIGR01493 HAD-SF-IA-v2 Haloaci 89.6 0.15 3.3E-06 39.0 1.0 14 35-48 2-15 (175)
174 TIGR02254 YjjG/YfnB HAD superf 89.5 0.17 3.7E-06 40.1 1.2 16 33-48 2-17 (224)
175 TIGR01428 HAD_type_II 2-haloal 89.5 0.16 3.5E-06 39.8 1.1 16 33-48 2-17 (198)
176 TIGR02247 HAD-1A3-hyp Epoxide 89.4 0.21 4.5E-06 39.6 1.6 15 33-47 3-17 (211)
177 TIGR01491 HAD-SF-IB-PSPlk HAD- 89.0 0.21 4.6E-06 38.9 1.4 16 32-47 4-19 (201)
178 PLN02382 probable sucrose-phos 89.0 0.86 1.9E-05 40.5 5.4 21 26-46 3-23 (413)
179 PRK09449 dUMP phosphatase; Pro 88.6 0.2 4.4E-06 39.9 1.1 15 32-46 3-17 (224)
180 PRK13222 phosphoglycolate phos 88.4 0.22 4.8E-06 39.5 1.2 17 31-47 5-21 (226)
181 TIGR01680 Veg_Stor_Prot vegeta 88.3 0.38 8.2E-06 40.4 2.5 93 31-130 100-197 (275)
182 PF06941 NT5C: 5' nucleotidase 87.8 0.99 2.1E-05 35.4 4.5 82 79-176 72-161 (191)
183 PRK11590 hypothetical protein; 87.4 0.97 2.1E-05 36.0 4.3 17 31-47 5-21 (211)
184 KOG1615|consensus 87.2 1.6 3.4E-05 35.1 5.3 85 79-164 87-187 (227)
185 TIGR01512 ATPase-IB2_Cd heavy 87.0 0.55 1.2E-05 43.1 3.0 87 76-171 358-446 (536)
186 TIGR01509 HAD-SF-IA-v3 haloaci 86.8 0.3 6.4E-06 37.3 1.0 15 34-48 1-15 (183)
187 PLN02177 glycerol-3-phosphate 86.5 0.53 1.1E-05 42.9 2.6 34 14-47 4-37 (497)
188 PRK06698 bifunctional 5'-methy 85.8 0.31 6.8E-06 43.7 0.8 16 33-48 242-257 (459)
189 COG4229 Predicted enolase-phos 85.8 0.65 1.4E-05 36.9 2.4 96 77-174 100-201 (229)
190 PF13419 HAD_2: Haloacid dehal 85.8 0.34 7.4E-06 36.1 0.9 14 35-48 1-14 (176)
191 TIGR01545 YfhB_g-proteo haloac 85.6 2.2 4.8E-05 34.2 5.6 38 79-116 93-132 (210)
192 TIGR02471 sucr_syn_bact_C sucr 85.3 0.61 1.3E-05 37.7 2.2 14 34-47 1-14 (236)
193 KOG4549|consensus 84.9 7.7 0.00017 29.0 7.5 79 31-118 4-84 (144)
194 COG3769 Predicted hydrolase (H 84.8 3 6.5E-05 34.3 5.8 57 31-119 6-63 (274)
195 PLN02205 alpha,alpha-trehalose 84.4 1.7 3.6E-05 42.3 5.0 60 29-116 593-654 (854)
196 PF08235 LNS2: LNS2 (Lipin/Ned 84.4 2.6 5.6E-05 32.5 5.1 62 35-116 2-64 (157)
197 PF02358 Trehalose_PPase: Treh 83.2 1.6 3.5E-05 35.3 3.8 51 36-112 1-53 (235)
198 PF12710 HAD: haloacid dehalog 81.8 2.2 4.8E-05 32.7 4.0 47 81-127 86-138 (192)
199 PF05116 S6PP: Sucrose-6F-phos 80.1 1.5 3.2E-05 36.1 2.5 55 32-117 2-57 (247)
200 TIGR01545 YfhB_g-proteo haloac 79.6 0.99 2.2E-05 36.2 1.3 18 31-48 4-21 (210)
201 PRK09456 ?-D-glucose-1-phospha 79.0 1 2.2E-05 35.3 1.3 14 34-47 2-15 (199)
202 COG1011 Predicted hydrolase (H 78.1 1.3 2.8E-05 35.1 1.6 18 31-48 3-20 (229)
203 PLN03063 alpha,alpha-trehalose 77.3 4.3 9.3E-05 39.3 5.1 65 29-116 504-570 (797)
204 PLN03064 alpha,alpha-trehalose 75.7 5.8 0.00013 39.0 5.5 71 29-116 588-660 (934)
205 PF05822 UMPH-1: Pyrimidine 5' 74.6 4.2 9.2E-05 33.7 3.7 99 79-177 89-211 (246)
206 TIGR01488 HAD-SF-IB Haloacid D 72.7 1.7 3.7E-05 33.0 1.0 13 35-47 2-14 (177)
207 PF12710 HAD: haloacid dehalog 71.1 1.7 3.7E-05 33.3 0.7 13 35-47 1-13 (192)
208 TIGR01490 HAD-SF-IB-hyp1 HAD-s 69.6 2.1 4.5E-05 33.4 0.8 13 35-47 2-14 (202)
209 cd06537 CIDE_N_B CIDE_N domain 69.4 10 0.00022 26.0 4.0 16 32-47 39-54 (81)
210 PLN02919 haloacid dehalogenase 69.2 3.1 6.7E-05 41.5 2.1 18 31-48 74-91 (1057)
211 cd06539 CIDE_N_A CIDE_N domain 67.6 11 0.00023 25.7 3.8 17 31-47 39-55 (78)
212 PRK10671 copA copper exporting 64.9 7.7 0.00017 37.6 3.8 85 78-171 648-733 (834)
213 PF08484 Methyltransf_14: C-me 64.5 20 0.00043 27.6 5.3 45 81-127 53-98 (160)
214 KOG2134|consensus 63.9 16 0.00035 32.3 5.2 56 31-105 74-130 (422)
215 smart00266 CAD Domains present 63.8 15 0.00032 24.7 3.9 16 32-47 38-53 (74)
216 cd06538 CIDE_N_FSP27 CIDE_N do 62.0 12 0.00026 25.5 3.2 16 32-47 39-54 (79)
217 cd01615 CIDE_N CIDE_N domain, 60.9 16 0.00035 24.8 3.7 17 31-47 39-55 (78)
218 cd06536 CIDE_N_ICAD CIDE_N dom 60.3 15 0.00033 25.0 3.5 17 31-47 41-57 (80)
219 PF00702 Hydrolase: haloacid d 59.1 5.9 0.00013 30.7 1.6 15 33-47 2-16 (215)
220 PF02017 CIDE-N: CIDE-N domain 58.3 7.3 0.00016 26.5 1.7 17 31-47 39-55 (78)
221 TIGR01459 HAD-SF-IIA-hyp4 HAD- 57.9 0.79 1.7E-05 37.3 -3.7 88 82-171 140-235 (242)
222 PF05761 5_nucleotid: 5' nucle 56.5 31 0.00067 31.2 5.9 53 76-128 179-240 (448)
223 PLN02499 glycerol-3-phosphate 55.4 8 0.00017 35.3 2.0 23 97-119 110-133 (498)
224 PF06941 NT5C: 5' nucleotidase 51.9 8.4 0.00018 30.1 1.4 16 32-47 2-17 (191)
225 cd02514 GT13_GLCNAC-TI GT13_GL 50.5 19 0.00041 31.3 3.4 40 77-116 6-52 (334)
226 PRK01122 potassium-transportin 50.4 13 0.00029 35.3 2.7 40 80-119 445-485 (679)
227 COG1778 Low specificity phosph 48.6 28 0.00061 27.1 3.7 106 30-163 6-112 (170)
228 TIGR01458 HAD-SF-IIA-hyp3 HAD- 47.8 1.1 2.4E-05 37.0 -4.5 90 83-173 123-220 (257)
229 KOG3189|consensus 47.8 30 0.00064 28.1 3.8 43 31-104 10-52 (252)
230 COG3700 AphA Acid phosphatase 46.9 23 0.00051 28.2 3.1 105 26-160 57-170 (237)
231 PF13701 DDE_Tnp_1_4: Transpos 46.2 28 0.00062 31.3 4.0 88 31-119 138-240 (448)
232 PF04312 DUF460: Protein of un 42.2 1.5E+02 0.0032 22.4 6.7 53 35-118 46-101 (138)
233 PRK11033 zntA zinc/cadmium/mer 42.0 1E+02 0.0023 29.6 7.3 76 75-162 563-640 (741)
234 cd06535 CIDE_N_CAD CIDE_N doma 34.7 69 0.0015 21.7 3.5 13 32-44 40-52 (77)
235 COG5083 SMP2 Uncharacterized p 33.0 29 0.00064 31.4 1.9 19 29-47 372-390 (580)
236 COG4271 Predicted nucleotide-b 32.5 2E+02 0.0043 23.3 6.3 100 94-195 105-224 (233)
237 COG4030 Uncharacterized protei 30.0 69 0.0015 26.7 3.4 41 78-118 81-121 (315)
238 KOG2630|consensus 29.4 30 0.00064 28.6 1.2 81 82-164 125-211 (254)
239 KOG3040|consensus 29.1 1.8E+02 0.0038 24.0 5.5 55 32-118 7-62 (262)
240 TIGR01658 EYA-cons_domain eyes 28.5 26 0.00055 29.3 0.7 25 139-163 219-243 (274)
241 PF08030 NAD_binding_6: Ferric 27.0 1.4E+02 0.003 21.8 4.6 38 78-115 114-154 (156)
242 PF04989 CmcI: Cephalosporin h 25.9 1.2E+02 0.0026 24.5 4.1 79 85-163 24-123 (206)
243 cd02974 AhpF_NTD_N Alkyl hydro 25.8 76 0.0017 22.0 2.7 34 82-116 7-40 (94)
244 TIGR01497 kdpB K+-transporting 25.6 99 0.0021 29.5 4.2 41 79-119 445-486 (675)
245 PLN02588 glycerol-3-phosphate 25.5 58 0.0013 30.0 2.5 18 31-48 49-66 (525)
246 PF03071 GNT-I: GNT-I family; 25.3 1.4E+02 0.0031 26.9 4.9 105 75-179 97-234 (434)
247 TIGR01522 ATPase-IIA2_Ca golgi 24.3 1E+02 0.0022 30.2 4.2 40 80-119 528-568 (884)
248 cd08568 GDPD_TmGDE_like Glycer 23.5 1.4E+02 0.003 23.8 4.2 30 86-115 184-214 (226)
249 PF14824 Sirohm_synth_M: Siroh 23.3 1.4E+02 0.003 16.4 2.8 22 96-117 5-27 (30)
250 KOG2882|consensus 22.3 2.2E+02 0.0048 24.4 5.2 48 33-112 23-75 (306)
251 KOG3128|consensus 21.7 1E+02 0.0022 26.0 3.0 89 76-164 134-242 (298)
252 PF00034 Cytochrom_C: Cytochro 21.5 63 0.0014 20.6 1.6 18 179-196 74-91 (91)
253 PRK15423 hypoxanthine phosphor 21.4 3.2E+02 0.007 21.2 5.8 60 102-162 42-104 (178)
254 COG1117 PstB ABC-type phosphat 21.1 1.2E+02 0.0027 25.0 3.4 25 85-109 188-212 (253)
255 KOG1618|consensus 20.9 83 0.0018 27.4 2.4 17 31-47 34-50 (389)
256 PHA03050 glutaredoxin; Provisi 20.4 1.6E+02 0.0035 20.9 3.6 34 86-119 3-36 (108)
No 1
>KOG1605|consensus
Probab=100.00 E-value=5.3e-47 Score=311.63 Aligned_cols=183 Identities=55% Similarity=0.893 Sum_probs=168.3
Q ss_pred hccccceec-CCCCcccccccCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHH
Q psy17244 8 QHQAVKYEI-FPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVD 86 (196)
Q Consensus 8 ~~~~~~~~~-~~~~p~~~~~~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~ 86 (196)
+++..++.. .+..|..+.++...+|++|||||||||+||+.. .++....+|.+++.+++....+||.+|||++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~kk~lVLDLDeTLvHss~~------~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vd 137 (262)
T KOG1605|consen 64 KYQPVKYASQTPLSPVLPLRLATVGRKTLVLDLDETLVHSSLN------LKPIVNADFTVPVEIDGHIHQVYVRKRPHVD 137 (262)
T ss_pred hcccccccccccccccCCcccccCCCceEEEeCCCcccccccc------cCCCCCcceeeeeeeCCcceEEEEEcCCCHH
Confidence 345555554 367777777888899999999999999999842 3456788999999999888999999999999
Q ss_pred HHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCC
Q psy17244 87 FFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGF 166 (196)
Q Consensus 87 eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~ 166 (196)
+||..++++||++||||+...||.+|++.||+.+++|++|+||++|....|.|+|||..+|+++++||||||+|.++.+|
T Consensus 138 eFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~ 217 (262)
T KOG1605|consen 138 EFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQ 217 (262)
T ss_pred HHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccC
Confidence 99999999999999999999999999999999879999999999999999999999999999999999999999999999
Q ss_pred CCceEeeceecCCCCChHHHhhHHHHhhcC
Q psy17244 167 PDNAIPIKSWFSDPSDTALLALLPVLDALR 196 (196)
Q Consensus 167 ~~N~I~v~~f~~~~~D~~L~~l~~~L~~Lr 196 (196)
|+|||+|++|++++.|+||++|+|||++|+
T Consensus 218 p~NgIpI~sw~~d~~D~eLL~LlpfLe~L~ 247 (262)
T KOG1605|consen 218 PENGIPIKSWFDDPTDTELLKLLPFLEALA 247 (262)
T ss_pred ccCCCcccccccCCChHHHHHHHHHHHHhc
Confidence 999999999999999999999999999986
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=2.4e-43 Score=273.99 Aligned_cols=158 Identities=54% Similarity=0.894 Sum_probs=146.9
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHHH
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAA 111 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~ 111 (196)
|++|||||||||||+...+ +....++.+.+..++....++|++|||+.+||++|++.||++|||++++.||++
T Consensus 1 k~~lvlDLDeTLi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~ 73 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKM-------PKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADP 73 (162)
T ss_pred CcEEEEcCCCCcCCCCCCC-------CCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHH
Confidence 6899999999999997542 122678888888877788999999999999999999999999999999999999
Q ss_pred HHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHhhHHH
Q psy17244 112 VADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALLPV 191 (196)
Q Consensus 112 vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~l~~~ 191 (196)
+++.++|.+.+|+++++|++|...++.+.|+|+.+|++++++|+|||++..|..+++|||+|.+|.|+.+|++|.+|+++
T Consensus 74 il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~ 153 (162)
T TIGR02251 74 VLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPF 153 (162)
T ss_pred HHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHH
Confidence 99999998779999999999998888899999999999999999999999999999999999999999999999999999
Q ss_pred HhhcC
Q psy17244 192 LDALR 196 (196)
Q Consensus 192 L~~Lr 196 (196)
|+.|+
T Consensus 154 L~~l~ 158 (162)
T TIGR02251 154 LEGLR 158 (162)
T ss_pred HHHHh
Confidence 99885
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=3.3e-39 Score=249.11 Aligned_cols=151 Identities=44% Similarity=0.751 Sum_probs=121.3
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAV 112 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~v 112 (196)
|+|||||||||||+...+.. ..++... +....+++++|||+++||+++++.||++|||++++.||++|
T Consensus 1 k~LVlDLD~TLv~~~~~~~~--------~~~~~~~----~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v 68 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPL--------PYDFKII----DQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPV 68 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCT--------T-SEEEE----TEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCC--------Cccccee----ccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHH
Confidence 69999999999999965321 2222221 24567899999999999999999999999999999999999
Q ss_pred HHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCC-CCChHHHhhHHH
Q psy17244 113 ADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSD-PSDTALLALLPV 191 (196)
Q Consensus 113 l~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~-~~D~~L~~l~~~ 191 (196)
++.|+|.+.+|+++++|++|....+.+.|||+++|+++++||+|||++.+|..+++|+|+|++|.++ ++|++|.+|+++
T Consensus 69 ~~~ldp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~ 148 (159)
T PF03031_consen 69 LDALDPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPF 148 (159)
T ss_dssp HHHHTTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHH
T ss_pred HHhhhhhccccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHH
Confidence 9999997789999999999998877778999999999999999999999999999999999999999 899999999999
Q ss_pred Hhhc
Q psy17244 192 LDAL 195 (196)
Q Consensus 192 L~~L 195 (196)
|++|
T Consensus 149 L~~l 152 (159)
T PF03031_consen 149 LEEL 152 (159)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9986
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=4.9e-37 Score=244.02 Aligned_cols=142 Identities=20% Similarity=0.261 Sum_probs=119.1
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhH
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYG 109 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya 109 (196)
.+|++|||||||||+|+..... ..++.+|||+++||++++++|||+||||+++.||
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~------------------------~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya 74 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAE------------------------TGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWI 74 (195)
T ss_pred CCCcEEEEeCCCceEcccccCC------------------------CceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHH
Confidence 4899999999999999753210 2358999999999999999999999999999999
Q ss_pred HHHHHHhcCCC-ceeeEEEEecCCCC------CCCC-ccccccccCC------CCCcEEEEECCCccccCCCCceEeece
Q psy17244 110 AAVADKLDARR-HILRRRYYRQHCTP------ELGS-YTKDLSAISP------DLSSIFILDNSPGAYRGFPDNAIPIKS 175 (196)
Q Consensus 110 ~~vl~~ldp~~-~~f~~~l~r~~c~~------~~~~-~~KdL~~l~~------~~~~~iiIDD~~~~~~~~~~N~I~v~~ 175 (196)
+.+++.+++.. .-+...++.++|.. ..|. +.|||+.+|+ ++++||||||+|.++..||+|||+|++
T Consensus 75 ~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~ 154 (195)
T TIGR02245 75 EIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRP 154 (195)
T ss_pred HHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCC
Confidence 99999997532 22444556677742 2343 5999998843 789999999999999999999999999
Q ss_pred ecC----CCCChHHHhhHHHHhhc
Q psy17244 176 WFS----DPSDTALLALLPVLDAL 195 (196)
Q Consensus 176 f~~----~~~D~~L~~l~~~L~~L 195 (196)
|.+ +.+|++|++|++||+.|
T Consensus 155 f~~~~~~~~~D~eL~~L~~yL~~l 178 (195)
T TIGR02245 155 FKKAHANRGTDQELLKLTQYLKTI 178 (195)
T ss_pred ccccCCCCcccHHHHHHHHHHHHH
Confidence 995 46899999999999987
No 5
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=1.5e-33 Score=217.58 Aligned_cols=145 Identities=27% Similarity=0.358 Sum_probs=116.9
Q ss_pred CCCCeEEEEeCCCceeeeecCCCCCCCC--CCCCC----CCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEc
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGITRPTV--KPGTP----PDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFT 102 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~--~~~~~----~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T 102 (196)
..+|++||||||+|||||...+..+... .+... ..-...+.+. ...+++++|||+.+||+++++.|+++|||
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~--~~~~~v~~rPgv~efL~~l~~~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLG--TMWYLTKLRPFLHEFLKEASKLYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcC--CeEEEEEECCCHHHHHHHHHhhcEEEEEe
Confidence 4699999999999999998764322110 01100 0011222222 46789999999999999999999999999
Q ss_pred CCchhhHHHHHHHhcCCCceee-EEEEecCCCCCCCCccccccc-cCCCCCcEEEEECCCccccCCCCceEeeceecC
Q psy17244 103 ASMEIYGAAVADKLDARRHILR-RRYYRQHCTPELGSYTKDLSA-ISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 103 ~~~~~ya~~vl~~ldp~~~~f~-~~l~r~~c~~~~~~~~KdL~~-l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~ 178 (196)
++.+.||+++++.+||.+.+|+ .+++|++|. +.+.|||+. ++++++++|||||++.+|..||+|+|+|++|..
T Consensus 81 ~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~~ 155 (156)
T TIGR02250 81 MGTRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYNY 155 (156)
T ss_pred CCcHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCccc
Confidence 9999999999999999977995 457899996 677999955 588999999999999999999999999999963
No 6
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.97 E-value=1.2e-30 Score=199.69 Aligned_cols=148 Identities=49% Similarity=0.814 Sum_probs=133.3
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGA 110 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~ 110 (196)
+|++|||||||||+|+...+. .+....++.+.+.++.....+.+.+|||+.+||++|++.|+++|||++.+.|++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~ 75 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSF-----KEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYAD 75 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcC-----CCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHH
Confidence 588999999999999975321 234566777887887888899999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCCh
Q psy17244 111 AVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDT 183 (196)
Q Consensus 111 ~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~ 183 (196)
.+++.+++...+|..++++++|...++.+.|+++++|.+++++|+|||++..|..+++|||.|++|.++.+|.
T Consensus 76 ~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 76 PVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred HHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 9999999965567999999999988878999999999999999999999999999999999999999998874
No 7
>KOG2832|consensus
Probab=99.97 E-value=3.6e-30 Score=216.67 Aligned_cols=142 Identities=29% Similarity=0.550 Sum_probs=135.4
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhH
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYG 109 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya 109 (196)
+.+.||||+|.++|||..|+-. .++.+++|||++.||..|+++|||+|||+.+..||
T Consensus 187 Qp~yTLVleledvLVhpdws~~-----------------------tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~ 243 (393)
T KOG2832|consen 187 QPPYTLVLELEDVLVHPDWSYK-----------------------TGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTV 243 (393)
T ss_pred CCCceEEEEeeeeEeccchhhh-----------------------cCceeccCchHHHHHHhhcccceEEEEecCCccch
Confidence 4889999999999999998631 35779999999999999999999999999999999
Q ss_pred HHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHhhH
Q psy17244 110 AAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLALL 189 (196)
Q Consensus 110 ~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~l~ 189 (196)
.++++.+||. ++++++++|++|.+..|..+|||+.|+||+.+||+||-++.+..+||+|.|.+++|.|+++|+.|.+|+
T Consensus 244 ~pl~d~lDP~-g~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~ 322 (393)
T KOG2832|consen 244 FPLLDALDPK-GYISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLL 322 (393)
T ss_pred hhhHhhcCCc-ceEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHH
Confidence 9999999999 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy17244 190 PVLDAL 195 (196)
Q Consensus 190 ~~L~~L 195 (196)
++|+.|
T Consensus 323 ~FL~~i 328 (393)
T KOG2832|consen 323 AFLEYI 328 (393)
T ss_pred HHHHHH
Confidence 999975
No 8
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.94 E-value=3.3e-27 Score=203.21 Aligned_cols=160 Identities=46% Similarity=0.728 Sum_probs=146.1
Q ss_pred CCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchh
Q psy17244 28 SIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEI 107 (196)
Q Consensus 28 ~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ 107 (196)
....+++|++|||+||+||.... ....+|.+.+........++|..||++++|+..++++|++++||++...
T Consensus 208 ~~~~~k~L~l~lde~l~~S~~~~--------~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~ 279 (390)
T COG5190 208 STSPKKTLVLDLDETLVHSSFRY--------ITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKR 279 (390)
T ss_pred CCCCccccccCCCccceeecccc--------ccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhh
Confidence 35688999999999999998532 2344577766666666789999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeeceecCCCCChHHHh
Q psy17244 108 YGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFSDPSDTALLA 187 (196)
Q Consensus 108 ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D~~L~~ 187 (196)
||++|++.|++.+ .|++++||++|....|.|+|||..+++++..|||||++|.+|.++|+|+|++++|.+++.|.+|+.
T Consensus 280 y~~~v~d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ 358 (390)
T COG5190 280 YADPVLDILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLN 358 (390)
T ss_pred hcchHHHhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhh
Confidence 9999999999995 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhcC
Q psy17244 188 LLPVLDALR 196 (196)
Q Consensus 188 l~~~L~~Lr 196 (196)
|+++|+.|.
T Consensus 359 ll~~le~L~ 367 (390)
T COG5190 359 LLPFLEDLP 367 (390)
T ss_pred hcccccccc
Confidence 999998873
No 9
>KOG0323|consensus
Probab=99.82 E-value=2.9e-20 Score=168.29 Aligned_cols=142 Identities=25% Similarity=0.303 Sum_probs=110.9
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCC-----C----CCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEc
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVK-----P----GTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFT 102 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~-----~----~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T 102 (196)
++.||+|||.||+|+.......++.. . .+..-+.+ ........++|++||++.+||+++++.||++|||
T Consensus 146 ~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~--~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT 223 (635)
T KOG0323|consen 146 KLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRF--NPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT 223 (635)
T ss_pred cceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceee--cccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence 36999999999999986544332111 1 11111211 1113446799999999999999999999999999
Q ss_pred CCchhhHHHHHHHhcCCCceeeEE-EEecCCCCCCCCccccccccC-CCCCcEEEEECCCccccCCCCceEeeceecC
Q psy17244 103 ASMEIYGAAVADKLDARRHILRRR-YYRQHCTPELGSYTKDLSAIS-PDLSSIFILDNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 103 ~~~~~ya~~vl~~ldp~~~~f~~~-l~r~~c~~~~~~~~KdL~~l~-~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~ 178 (196)
.|++.||..|++.|||.+.+|+.| ++|+. ....-.+||..++ ++.+++|||||+..+|..++.|.|.|.+|..
T Consensus 224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~y 298 (635)
T KOG0323|consen 224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYPY 298 (635)
T ss_pred ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeeec
Confidence 999999999999999999999866 56776 2233367888775 5778899999999999999999999999873
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.17 E-value=1.2e-10 Score=91.38 Aligned_cols=156 Identities=13% Similarity=0.070 Sum_probs=101.1
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-chhhHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS-MEIYGA 110 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~-~~~ya~ 110 (196)
..+|||||+||+.....+-..+...+.....-.+. ......+.++||+.++|++|. +.+.+.|.|++ ...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~ 77 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIII-----DKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAY 77 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEE-----eCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHH
Confidence 47999999999987654322211111110000010 112345788999999999997 78999999998 999999
Q ss_pred HHHHHhcCCC--------ceeeEEEEecCCCCCCC--Ccccccccc---CCCCCcEEEEECCCccccCCCCceEeeceec
Q psy17244 111 AVADKLDARR--------HILRRRYYRQHCTPELG--SYTKDLSAI---SPDLSSIFILDNSPGAYRGFPDNAIPIKSWF 177 (196)
Q Consensus 111 ~vl~~ldp~~--------~~f~~~l~r~~c~~~~~--~~~KdL~~l---~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~ 177 (196)
.+++.++... .+|+.+++.+.....+. ...+.+... |.+++++++|||++........+|+.+....
T Consensus 78 ~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~ 157 (174)
T TIGR01685 78 EILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCP 157 (174)
T ss_pred HHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcC
Confidence 9999988641 47887777654321111 111222222 4789999999999999888889999887775
Q ss_pred CCCCChHHHhhHHHHhhcC
Q psy17244 178 SDPSDTALLALLPVLDALR 196 (196)
Q Consensus 178 ~~~~D~~L~~l~~~L~~Lr 196 (196)
... .+......||..|
T Consensus 158 ~g~---~~~~~~~~~~~~~ 173 (174)
T TIGR01685 158 SGM---DKGTFKKILEMWR 173 (174)
T ss_pred CCc---cHHHHHHHHHHhc
Confidence 432 2333444444443
No 11
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.05 E-value=2.1e-10 Score=95.44 Aligned_cols=100 Identities=8% Similarity=0.037 Sum_probs=84.9
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
.+...||+.++|++|. +.+.++|.|+++..+++.+++.++.. .+|+.+++.+.+...++ .+.+-++++|.+++++
T Consensus 107 ~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~ 185 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME-GFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC 185 (260)
T ss_pred CcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH-hhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe
Confidence 3567999999999998 67999999999999999999999876 58999998887765443 6788889999999999
Q ss_pred EEEECCCccccCCCCceEeeceecC
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f~~ 178 (196)
++|+|+..-......+|+.+..+.+
T Consensus 186 l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 186 IVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEec
Confidence 9999999877777777776665554
No 12
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.00 E-value=1.9e-10 Score=85.80 Aligned_cols=110 Identities=15% Similarity=0.139 Sum_probs=77.8
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-chhhHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS-MEIYGA 110 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~-~~~ya~ 110 (196)
+.+|+||||||+....... + .+-.+ +. . ...||+.++|++|+ +.+.++|.|++ .+.++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~--------~-~~~~~----~~---~---~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~ 61 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV--------G-EDPII----DL---E---VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAY 61 (128)
T ss_pred CEEEEeCCCCCCCCCcccc--------c-CCcch----hh---H---HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHH
Confidence 4789999999997732100 0 00000 00 0 57899999999997 68999999999 899999
Q ss_pred HHHHHhc-------CCCceeeEEEEecCCCCCCCCccccccccC--CCCCcEEEEECCCccc
Q psy17244 111 AVADKLD-------ARRHILRRRYYRQHCTPELGSYTKDLSAIS--PDLSSIFILDNSPGAY 163 (196)
Q Consensus 111 ~vl~~ld-------p~~~~f~~~l~r~~c~~~~~~~~KdL~~l~--~~~~~~iiIDD~~~~~ 163 (196)
.+++..+ .. .+|..+...+.. .....+.+-++++| .+++++++|||++...
T Consensus 62 ~~l~~~~~~~~i~~l~-~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 62 ELLKIFEDFGIIFPLA-EYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDNN 121 (128)
T ss_pred HHHHhccccccchhhH-hhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence 9999876 22 456555544322 22336677888889 9999999999998653
No 13
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.99 E-value=6e-10 Score=97.11 Aligned_cols=99 Identities=7% Similarity=-0.015 Sum_probs=84.2
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i 154 (196)
+...||+.+||+.|. +.+.++|-|++...+++.+++.++.. .+|+.++..+++...++ .|..-++++|.+++++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~-~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR-GFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH-HHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 567899999999997 68999999999999999999999987 68999999888765444 67888899999999999
Q ss_pred EEECCCccccCCCCceEeeceecC
Q psy17244 155 ILDNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~v~~f~~ 178 (196)
+|+|+..-......+|+.+....+
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV~~ 317 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAVAS 317 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEECC
Confidence 999999877666666776665543
No 14
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.93 E-value=1.5e-09 Score=91.00 Aligned_cols=96 Identities=6% Similarity=-0.003 Sum_probs=74.9
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILD 157 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiID 157 (196)
+..-||+.++|++|. +.+.++|.|++...++..+++.++.. .+|+.+.+.+........+.+-+++++.+++++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~-~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR-SLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh-hheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 566899999999998 67999999999999999999999886 5888776554432222344556677788999999999
Q ss_pred CCCccccCCCCceEeece
Q psy17244 158 NSPGAYRGFPDNAIPIKS 175 (196)
Q Consensus 158 D~~~~~~~~~~N~I~v~~ 175 (196)
|++.-......+|+.+..
T Consensus 220 Ds~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 220 DETRDVEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHCCCeEEE
Confidence 999766655566666543
No 15
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.92 E-value=1.2e-09 Score=87.58 Aligned_cols=97 Identities=10% Similarity=0.005 Sum_probs=81.4
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~ 153 (196)
.+...||+.++|+.|. +.+.++|.|++...++..+++.++.. .+|+.++..+.+...+ ..+.+-+++++.+++++
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~-~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 158 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD-EFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEA 158 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh-hceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence 4678899999999998 58999999999999999999999887 6899988877765443 36677888889999999
Q ss_pred EEEECCCccccCCCCceEeece
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKS 175 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~ 175 (196)
++|+|++.-......+|+.+..
T Consensus 159 ~~iGDs~~Di~aa~~aG~~~i~ 180 (214)
T PRK13288 159 LMVGDNHHDILAGKNAGTKTAG 180 (214)
T ss_pred EEECCCHHHHHHHHHCCCeEEE
Confidence 9999999877766677776544
No 16
>PRK11587 putative phosphatase; Provisional
Probab=98.91 E-value=2.9e-09 Score=85.87 Aligned_cols=99 Identities=6% Similarity=-0.045 Sum_probs=78.8
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
.+...||+.++|+.|. +.+.++|-|+++..++...++..+.. .+..+++.+++...++ .+.+-++++|.+++++
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~ 158 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQEC 158 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccE
Confidence 4678999999999997 78999999999999888888777653 3566677666544333 6778888999999999
Q ss_pred EEEECCCccccCCCCceEeeceecC
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f~~ 178 (196)
|+|+|++.-.......|+.+..+.+
T Consensus 159 l~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 159 VVVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred EEEecchhhhHHHHHCCCEEEEECC
Confidence 9999999877777777777666653
No 17
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.88 E-value=2.2e-09 Score=79.84 Aligned_cols=115 Identities=20% Similarity=0.183 Sum_probs=80.5
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc------
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM------ 105 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~------ 105 (196)
+.++||+||||++..... .+ .......||+.++|++|. +.+.++|.|++.
T Consensus 1 k~~~~D~dgtL~~~~~~~------~~-----------------~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~ 57 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYV------DD-----------------EDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGK 57 (132)
T ss_pred CEEEEeCCCceecCCCCC------CC-----------------HHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccH
Confidence 479999999999642110 00 012567899999999997 679999999999
Q ss_pred --hhhHHHHHHHhcCCCceeeEEEEecCC-CCCCCCcccccccc-CCCCCcEEEEEC-CCccccCCCCceEee
Q psy17244 106 --EIYGAAVADKLDARRHILRRRYYRQHC-TPELGSYTKDLSAI-SPDLSSIFILDN-SPGAYRGFPDNAIPI 173 (196)
Q Consensus 106 --~~ya~~vl~~ldp~~~~f~~~l~r~~c-~~~~~~~~KdL~~l-~~~~~~~iiIDD-~~~~~~~~~~N~I~v 173 (196)
..++..+++.++.. +...++...+ ......+.+-++++ +.+++++++|+| +..-......+|+..
T Consensus 58 ~~~~~~~~~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 58 FSSGRVARRLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred HHHHHHHHHHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 88899999998765 2223333222 22233567778888 599999999999 576655555555543
No 18
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.87 E-value=1.1e-08 Score=75.87 Aligned_cols=147 Identities=19% Similarity=0.169 Sum_probs=103.9
Q ss_pred EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHH
Q psy17244 34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAV 112 (196)
Q Consensus 34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~v 112 (196)
.+|||+|+||++....+...+.+..-+ .-.++ +..+.-|.++|++.+||.++. .+|-+..+|.+.+.-|-++
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs--~n~i~-----Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~a 74 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVS--SNTIE-----DSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKA 74 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecC--cccee-----cCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHH
Confidence 589999999998865433322111111 01111 224567999999999999998 6899999999999999999
Q ss_pred HHHhcCCCceeeEEEEecCCCCCCCCcccccccc------CCCCCcEEEEECCCcccc---CCCCceEeeceecCCCCCh
Q psy17244 113 ADKLDARRHILRRRYYRQHCTPELGSYTKDLSAI------SPDLSSIFILDNSPGAYR---GFPDNAIPIKSWFSDPSDT 183 (196)
Q Consensus 113 l~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l------~~~~~~~iiIDD~~~~~~---~~~~N~I~v~~f~~~~~D~ 183 (196)
+..++.. ++|.+.....+-.. ..+..+-|+.+ ...|.++|.+||+...+. .+-+|.=+++.|.+-+.-.
T Consensus 75 Lral~~~-~yFhy~ViePhP~K-~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~~ 152 (164)
T COG4996 75 LRALDLL-QYFHYIVIEPHPYK-FLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCYS 152 (164)
T ss_pred HHHhchh-hhEEEEEecCCChh-HHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHHH
Confidence 9999998 69987776554332 22334445444 347899999999997653 5667888888888875555
Q ss_pred HHHhhH
Q psy17244 184 ALLALL 189 (196)
Q Consensus 184 ~L~~l~ 189 (196)
+...|+
T Consensus 153 ei~slL 158 (164)
T COG4996 153 EIFSLL 158 (164)
T ss_pred HHHHHH
Confidence 554444
No 19
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.84 E-value=2.6e-09 Score=83.75 Aligned_cols=95 Identities=8% Similarity=0.023 Sum_probs=78.4
Q ss_pred EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244 79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI 155 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii 155 (196)
+..-|+ .+.|..+.+.+.++|-|++...+++.+++.++-. .+|+.+++.+++...++ .+..-++++|.+++++|+
T Consensus 87 ~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~-~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLR-RYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcH-hHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 445676 4899999877899999999999999999999876 68999998887765444 567788889999999999
Q ss_pred EECCCccccCCCCceEeece
Q psy17244 156 LDNSPGAYRGFPDNAIPIKS 175 (196)
Q Consensus 156 IDD~~~~~~~~~~N~I~v~~ 175 (196)
|+|++.-+.....+|+.+..
T Consensus 165 igDs~~di~aA~~aG~~~i~ 184 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAVD 184 (188)
T ss_pred EeccHhhHHHHHHCCCEEEe
Confidence 99999887777777776544
No 20
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.84 E-value=3.2e-09 Score=86.43 Aligned_cols=96 Identities=7% Similarity=-0.077 Sum_probs=78.1
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
.+...||+.++|+.|+ +.+.++|-|++...++..+++.++.. .+|..+.+.+.+...++ .+.+-++++|.+++++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~ 171 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE-QRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC 171 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch-hcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence 4678999999999997 57999999999999999999998876 57877777776544333 5778888999999999
Q ss_pred EEEECCCccccCCCCceEeec
Q psy17244 154 FILDNSPGAYRGFPDNAIPIK 174 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~ 174 (196)
++|+|++.-.......|+.+.
T Consensus 172 l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 172 VYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred EEeCCCHHHHHHHHHCCCcEE
Confidence 999999976665556666554
No 21
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.82 E-value=1.2e-08 Score=85.70 Aligned_cols=125 Identities=17% Similarity=0.112 Sum_probs=89.8
Q ss_pred ccCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeC-ccHHHHHHHhh-hCceEEEEcC
Q psy17244 26 RLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKR-PHVDFFLDIVS-QWYELVVFTA 103 (196)
Q Consensus 26 ~~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~R-P~l~eFL~~l~-~~yei~I~T~ 103 (196)
......++.+||||||||+.... -|..| ||+.+.|++|. +++.++|||+
T Consensus 120 ~~~~~~~kvIvFDLDgTLi~~~~-----------------------------~v~irdPgV~EaL~~LkekGikLaIaTS 170 (301)
T TIGR01684 120 SKVFEPPHVVVFDLDSTLITDEE-----------------------------PVRIRDPRIYDSLTELKKRGCILVLWSY 170 (301)
T ss_pred ccccccceEEEEecCCCCcCCCC-----------------------------ccccCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 34556778999999999998752 16789 99999999998 4799999999
Q ss_pred CchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC----------------Cccccc-----------------cccCCC-
Q psy17244 104 SMEIYGAAVADKLDARRHILRRRYYRQHCTPELG----------------SYTKDL-----------------SAISPD- 149 (196)
Q Consensus 104 ~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~----------------~~~KdL-----------------~~l~~~- 149 (196)
+.+.++..+++.++.. .+|..+++.++....++ .+..|. ++.|.+
T Consensus 171 ~~Re~v~~~L~~lGLd-~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~ 249 (301)
T TIGR01684 171 GDRDHVVESMRKVKLD-RYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNY 249 (301)
T ss_pred CCHHHHHHHHHHcCCC-cccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCce
Confidence 9999999999999998 58877776555444321 122333 222332
Q ss_pred CCcEEEEECCCccccCCCCceEeeceecCCCC
Q psy17244 150 LSSIFILDNSPGAYRGFPDNAIPIKSWFSDPS 181 (196)
Q Consensus 150 ~~~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~ 181 (196)
.+.+-+|||-+.. ..+-+|-+.|...-...+
T Consensus 250 ~KtitLVDDl~~N-n~~YD~fv~v~rcp~P~~ 280 (301)
T TIGR01684 250 FKSITLVDDLADN-NFNYDYFVNVSRCPVPVN 280 (301)
T ss_pred eeeEEEeccCccc-CccceeEEEeeeCCCCch
Confidence 2456899998864 344477777776654433
No 22
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.81 E-value=2.5e-09 Score=86.85 Aligned_cols=100 Identities=12% Similarity=0.068 Sum_probs=86.5
Q ss_pred EEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
.+...||+.+||++|.+ ..-+++-|++++..+..+++.++.. .+|..+++.++....++ .|.+-+++||.+++++
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~-~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~C 162 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLL-DYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEEC 162 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccCh-hhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHe
Confidence 37899999999999985 4999999999999999999999987 68998888877766644 7899999999999999
Q ss_pred EEEECCCccccCCCCceEeeceecC
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f~~ 178 (196)
|+|||++.-.......|+.+..+.+
T Consensus 163 vviEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 163 VVVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEEecchhHHHHHHHCCCEEEEecC
Confidence 9999999877666667777777765
No 23
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.80 E-value=8e-09 Score=83.39 Aligned_cols=100 Identities=14% Similarity=-0.019 Sum_probs=83.5
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i 154 (196)
..+.||+.++|+.++ +.+.++|.|++....++.+++.++.. .+|+.++..+.....++ .+..-++.+|.++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR-DYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch-hcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 567899999999997 68999999999999999999999877 68988888776554433 56778888899999999
Q ss_pred EEECCCccccCCCCceEeeceecCC
Q psy17244 155 ILDNSPGAYRGFPDNAIPIKSWFSD 179 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~v~~f~~~ 179 (196)
+|+|++.-.......|+.+.-+.+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCC
Confidence 9999998877777777776666543
No 24
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.77 E-value=3.8e-08 Score=82.76 Aligned_cols=124 Identities=19% Similarity=0.150 Sum_probs=91.5
Q ss_pred CCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeC-ccHHHHHHHhh-hCceEEEEcCCc
Q psy17244 28 SIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKR-PHVDFFLDIVS-QWYELVVFTASM 105 (196)
Q Consensus 28 ~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~R-P~l~eFL~~l~-~~yei~I~T~~~ 105 (196)
....++.+||||||||+.+... |..| |++.+.|++|+ +++.++|||++.
T Consensus 124 ~~~~~~~i~~D~D~TL~~~~~~-----------------------------v~irdp~V~EtL~eLkekGikLaIvTNg~ 174 (303)
T PHA03398 124 VWEIPHVIVFDLDSTLITDEEP-----------------------------VRIRDPFVYDSLDELKERGCVLVLWSYGN 174 (303)
T ss_pred EeeeccEEEEecCCCccCCCCc-----------------------------cccCChhHHHHHHHHHHCCCEEEEEcCCC
Confidence 3456789999999999988421 7789 99999999999 589999999999
Q ss_pred hhhHHHHHHHhcCCCceeeEEEEecCCCCCC----------------CCcccccc---cc--------------CCC-CC
Q psy17244 106 EIYGAAVADKLDARRHILRRRYYRQHCTPEL----------------GSYTKDLS---AI--------------SPD-LS 151 (196)
Q Consensus 106 ~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~----------------~~~~KdL~---~l--------------~~~-~~ 151 (196)
++++..+++.++.. .+|..+++.++..... ..+..|.. .| |.+ .+
T Consensus 175 Re~v~~~Le~lgL~-~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~K 253 (303)
T PHA03398 175 REHVVHSLKETKLE-GYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFK 253 (303)
T ss_pred hHHHHHHHHHcCCC-ccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceec
Confidence 99999999999987 6887777766554432 12233333 22 322 23
Q ss_pred cEEEEECCCccccCCCCceEeeceecCCCCC
Q psy17244 152 SIFILDNSPGAYRGFPDNAIPIKSWFSDPSD 182 (196)
Q Consensus 152 ~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~D 182 (196)
.+-+|||-+.. ..+-+|-+.|...-...+|
T Consensus 254 tiTLVDDl~~N-n~~YD~fv~v~rcp~P~~D 283 (303)
T PHA03398 254 TITLVDDLKSN-NYSYDYFVNVKRCPEPVND 283 (303)
T ss_pred cEEEeccCccc-CccceeEEEeeeCCCCcHH
Confidence 56899998866 4566788888877654443
No 25
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.73 E-value=1.8e-08 Score=78.91 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=77.1
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch-----
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME----- 106 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~----- 106 (196)
+.+.||.||||+...... ... --+.+-||+.++|++|. +.|.++|.||++.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~--------~~~---------------~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~ 58 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV--------HEI---------------DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGY 58 (176)
T ss_pred CEEEEeCCCCEeCCCCCC--------CCH---------------HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCc
Confidence 678999999999422110 000 01567799999999998 6799999999985
Q ss_pred ----------hhHHHHHHHhcCCCceeeEEEEec-----------CCCCCC---CCccccccccCCCCCcEEEEECCCcc
Q psy17244 107 ----------IYGAAVADKLDARRHILRRRYYRQ-----------HCTPEL---GSYTKDLSAISPDLSSIFILDNSPGA 162 (196)
Q Consensus 107 ----------~ya~~vl~~ldp~~~~f~~~l~r~-----------~c~~~~---~~~~KdL~~l~~~~~~~iiIDD~~~~ 162 (196)
.+...++..+... |..+++.. .|...+ ..+..-++++|.+++++++|+|++.-
T Consensus 59 ~~~~~~~~~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~D 135 (176)
T TIGR00213 59 FTEAQFEQLTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLED 135 (176)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHH
Confidence 2333444443322 44444432 232222 26677788899999999999999987
Q ss_pred ccCCCCceEee
Q psy17244 163 YRGFPDNAIPI 173 (196)
Q Consensus 163 ~~~~~~N~I~v 173 (196)
......+|+.+
T Consensus 136 i~aA~~aG~~~ 146 (176)
T TIGR00213 136 MQAGVAAKVKT 146 (176)
T ss_pred HHHHHHCCCcE
Confidence 76666677643
No 26
>PLN02940 riboflavin kinase
Probab=98.67 E-value=1.6e-08 Score=88.52 Aligned_cols=97 Identities=5% Similarity=-0.001 Sum_probs=79.4
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHH-HhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVAD-KLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~-~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
+...||+.++|++|. +.+.++|-|++...+++.+++ ..+-. .+|+.+++.+++...+. .+..-++.+|.+++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 567899999999997 679999999999999999887 55654 68999999888765443 6778888899999999
Q ss_pred EEEECCCccccCCCCceEeecee
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSW 176 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f 176 (196)
++|+|++.-.......|+.+...
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v 193 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAV 193 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEE
Confidence 99999998776666666665444
No 27
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.67 E-value=2.1e-08 Score=83.89 Aligned_cols=94 Identities=13% Similarity=0.043 Sum_probs=76.1
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i 154 (196)
+..+||+.++|+.|. +.+.++|.|+++..+++.+++.++.. .+|..+++.+.+...+. .+.+-++++|.++++++
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~-~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIG-RYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcH-hhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 567899999999997 68999999999999999999998776 57887777665544333 45677788899999999
Q ss_pred EEECCCccccCCCCceEee
Q psy17244 155 ILDNSPGAYRGFPDNAIPI 173 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~v 173 (196)
+|+|+..-......+|+.+
T Consensus 179 ~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EECCCHHHHHHHHHCCCeE
Confidence 9999998766666667643
No 28
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.66 E-value=3e-08 Score=79.68 Aligned_cols=95 Identities=6% Similarity=-0.018 Sum_probs=76.0
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEEEecCCCCCC---CCccccccccCCC-CCc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRYYRQHCTPEL---GSYTKDLSAISPD-LSS 152 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~-~~~ 152 (196)
..+.||+.++|++|+ +.+.++|-|++...++..+++.++... .+|..+++.+.-...+ ..+.+-+++++.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 578999999999997 789999999999999999999988641 5788887766543322 2566777888886 799
Q ss_pred EEEEECCCccccCCCCceEee
Q psy17244 153 IFILDNSPGAYRGFPDNAIPI 173 (196)
Q Consensus 153 ~iiIDD~~~~~~~~~~N~I~v 173 (196)
+++|+|++.-.......|+.+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999997766666666665
No 29
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.66 E-value=3.1e-08 Score=72.08 Aligned_cols=107 Identities=14% Similarity=0.083 Sum_probs=75.6
Q ss_pred EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHH
Q psy17244 34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAV 112 (196)
Q Consensus 34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~v 112 (196)
++|||+||||+........ ......+|++.++|+.+.+ .+.++|.|++.+.++..+
T Consensus 1 ~~vfD~D~tl~~~~~~~~~-----------------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~ 57 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE-----------------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLEL 57 (139)
T ss_pred CeEEccCCceEccCccccc-----------------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHH
Confidence 4799999999887632110 1236889999999999995 599999999999999999
Q ss_pred HHHhcCCCceeeEEEEecCCCCC----------------C---CCccccccccCCCCCcEEEEECCCcccc
Q psy17244 113 ADKLDARRHILRRRYYRQHCTPE----------------L---GSYTKDLSAISPDLSSIFILDNSPGAYR 164 (196)
Q Consensus 113 l~~ldp~~~~f~~~l~r~~c~~~----------------~---~~~~KdL~~l~~~~~~~iiIDD~~~~~~ 164 (196)
++.++.. ..+..++..+..... + ..+..-++.++.+++.++.|+|+..-..
T Consensus 58 ~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~ 127 (139)
T cd01427 58 LEELGLD-DYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIE 127 (139)
T ss_pred HHHcCCc-hhhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHH
Confidence 9998764 345555543322211 1 1223344555667899999999986543
No 30
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.65 E-value=4.6e-08 Score=75.84 Aligned_cols=124 Identities=14% Similarity=0.054 Sum_probs=90.3
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-------
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS------- 104 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~------- 104 (196)
+.++||.||||++..... |... ..-.+..-||+.++|++|. +.|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~~-------------~~~~-------~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~ 61 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSD-------------FQVD-------ALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPS 61 (161)
T ss_pred CEEEEeCCCCccccCCCc-------------cccC-------CHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCc
Confidence 579999999999853210 0000 0113778999999999998 57999999996
Q ss_pred --------chhhHHHHHHHhcCCCceeeEEEEe-----cCCCCCCC---CccccccccCCCCCcEEEEECCCccccCCCC
Q psy17244 105 --------MEIYGAAVADKLDARRHILRRRYYR-----QHCTPELG---SYTKDLSAISPDLSSIFILDNSPGAYRGFPD 168 (196)
Q Consensus 105 --------~~~ya~~vl~~ldp~~~~f~~~l~r-----~~c~~~~~---~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~ 168 (196)
...++..+++.++.. |..+++. +++...++ .+..-++.++.+++++++|.|+..-......
T Consensus 62 ~~~~~~~~~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~ 138 (161)
T TIGR01261 62 FPQADFDGPHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAEN 138 (161)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHH
Confidence 356888888888875 6656543 45444333 4455667778899999999999876677778
Q ss_pred ceEeeceecCC
Q psy17244 169 NAIPIKSWFSD 179 (196)
Q Consensus 169 N~I~v~~f~~~ 179 (196)
+|+.+..+...
T Consensus 139 aGi~~i~~~~~ 149 (161)
T TIGR01261 139 LGIRGIQYDEE 149 (161)
T ss_pred CCCeEEEEChh
Confidence 88888877754
No 31
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.65 E-value=2e-08 Score=76.35 Aligned_cols=117 Identities=15% Similarity=0.145 Sum_probs=78.5
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch-----
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME----- 106 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~----- 106 (196)
++++||+||||+......- . .. ...+...||+.++|+.|. +.|.++|.|++..
T Consensus 1 ~~~~~d~dgtl~~~~~~~~-~----~~----------------~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~ 59 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDY-P----RS----------------LDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGY 59 (147)
T ss_pred CeEEEeCCCceeccCCccc-C----CC----------------HHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCc
Confidence 4789999999998863210 0 00 011467899999999997 7899999999874
Q ss_pred ----------hhHHHHHHHhcCCCceeeEEEEe-----cCCC---CCCCCccccccccCCCCCcEEEEECCCccccCCCC
Q psy17244 107 ----------IYGAAVADKLDARRHILRRRYYR-----QHCT---PELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPD 168 (196)
Q Consensus 107 ----------~ya~~vl~~ldp~~~~f~~~l~r-----~~c~---~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~ 168 (196)
..+..+++.++.. +...++. +... .....+.+-+++++.+++++++|.|++.-......
T Consensus 60 ~~~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~ 136 (147)
T TIGR01656 60 FSAEAFRAPNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARN 136 (147)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHH
Confidence 5667777777654 1122222 1111 12235667778889999999999999876655555
Q ss_pred ceEee
Q psy17244 169 NAIPI 173 (196)
Q Consensus 169 N~I~v 173 (196)
.|+..
T Consensus 137 ~Gi~~ 141 (147)
T TIGR01656 137 AGLAA 141 (147)
T ss_pred CCCCE
Confidence 55543
No 32
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.62 E-value=6.2e-08 Score=75.68 Aligned_cols=123 Identities=15% Similarity=0.120 Sum_probs=67.7
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcC-CchhhH
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTA-SMEIYG 109 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~-~~~~ya 109 (196)
++.+|||||.||+.........+.+.+..... .+ . +..+.-+.+-|++.+.|++|. +..+|++.|. ..++.|
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~-~v---~--D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A 76 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGN-VV---V--DSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWA 76 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS---E---E--ETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCC-EE---E--eCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHH
Confidence 56899999999998876554332222222211 11 1 124556899999999999999 6899999996 468899
Q ss_pred HHHHHHhcCC---------CceeeEEEEecCCCCCC-CCccccccccCCCCCcEEEEECCCccc
Q psy17244 110 AAVADKLDAR---------RHILRRRYYRQHCTPEL-GSYTKDLSAISPDLSSIFILDNSPGAY 163 (196)
Q Consensus 110 ~~vl~~ldp~---------~~~f~~~l~r~~c~~~~-~~~~KdL~~l~~~~~~~iiIDD~~~~~ 163 (196)
+++++.++.. ..+|++.=.-.. .+ ..+.+-.+..|.+.+.++++||.....
T Consensus 77 ~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 77 RELLKLLEIDDADGDGVPLIEYFDYLEIYPG---SKTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHHHHHTT-C----------CCECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HHHHHhcCCCccccccccchhhcchhheecC---chHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 9999998875 124443211111 11 133344446689999999999998654
No 33
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.62 E-value=2.5e-08 Score=80.27 Aligned_cols=96 Identities=7% Similarity=0.039 Sum_probs=77.3
Q ss_pred EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceee-EEEEecCCCCCC---CCccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILR-RRYYRQHCTPEL---GSYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~-~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~ 153 (196)
.+...||+.++|+.|. +.++|.|++.+.+++.+++..+.. .+|. .+++.++....+ ..|..-++++|.+++++
T Consensus 86 ~~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~-~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~ 162 (221)
T PRK10563 86 ELEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGML-HYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC 162 (221)
T ss_pred cCCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChH-HhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 3677899999999994 899999999999999999988876 5775 566665554433 36778888899999999
Q ss_pred EEEECCCccccCCCCceEeecee
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSW 176 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f 176 (196)
++|+|++.-.......|+.+.-+
T Consensus 163 l~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 163 ILVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EEEeCcHhhHHHHHHCCCEEEEE
Confidence 99999998777666777766544
No 34
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=98.62 E-value=3.7e-08 Score=76.87 Aligned_cols=129 Identities=16% Similarity=0.118 Sum_probs=92.6
Q ss_pred cceecCCCCcccccccCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHH
Q psy17244 12 VKYEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDI 91 (196)
Q Consensus 12 ~~~~~~~~~p~~~~~~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~ 91 (196)
+.+.+.++..+....+...+-+.+|+|+||||..... ...-||+.++|++
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~v~~vv~D~Dgtl~~~~~------------------------------~~~~pgv~e~L~~ 54 (170)
T TIGR01668 5 PHAIVKTLNDLTIDLLKKVGIKGVVLDKDNTLVYPDH------------------------------NEAYPALRDWIEE 54 (170)
T ss_pred cccccCchhhCCHHHHHHCCCCEEEEecCCccccCCC------------------------------CCcChhHHHHHHH
Confidence 3444556667777777777889999999999985531 2446999999999
Q ss_pred hh-hCceEEEEcCCc-hhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCc-cccCCCC
Q psy17244 92 VS-QWYELVVFTASM-EIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPG-AYRGFPD 168 (196)
Q Consensus 92 l~-~~yei~I~T~~~-~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~-~~~~~~~ 168 (196)
|. +.+.++|.|+++ ...+..+++.++.. .+ . .........+..-++.++.+++++++|+|+.. -......
T Consensus 55 Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~-~~-----~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~ 127 (170)
T TIGR01668 55 LKAAGRKLLIVSNNAGEQRAKAVEKALGIP-VL-----P-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNR 127 (170)
T ss_pred HHHcCCEEEEEeCCchHHHHHHHHHHcCCE-EE-----c-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHH
Confidence 98 569999999998 67787777776643 11 1 12233334667778888999999999999983 5555555
Q ss_pred ceEeeceec
Q psy17244 169 NAIPIKSWF 177 (196)
Q Consensus 169 N~I~v~~f~ 177 (196)
+|+...-+.
T Consensus 128 aGi~~i~v~ 136 (170)
T TIGR01668 128 NGSYTILVE 136 (170)
T ss_pred cCCeEEEEc
Confidence 666555444
No 35
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.61 E-value=6.6e-08 Score=82.69 Aligned_cols=110 Identities=20% Similarity=0.135 Sum_probs=78.8
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG 109 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya 109 (196)
.+|+||+|||+||+.-.--.. ....+ ......|++.++|+.|+ +++.++|.|++....|
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~----------g~~~i----------~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a 61 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGED----------GIDNL----------NLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDA 61 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccC----------Ccccc----------ccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHH
Confidence 478999999999996642110 00000 01224789999999998 7899999999999999
Q ss_pred HHHHHH----hcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccc
Q psy17244 110 AAVADK----LDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAY 163 (196)
Q Consensus 110 ~~vl~~----ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~ 163 (196)
..+++. +... .+|...... .........+-++.+|.+++.+|+|||++.-.
T Consensus 62 ~~~l~~~~~~~~~~-~~f~~~~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 62 KKVFERRKDFILQA-EDFDARSIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred HHHHHhCccccCcH-HHeeEEEEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence 999998 6655 456554322 12222355677788899999999999999744
No 36
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.58 E-value=2.6e-08 Score=78.87 Aligned_cols=99 Identities=9% Similarity=0.108 Sum_probs=72.7
Q ss_pred EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCC---ceeeEEEEecCCCCCCCCccccccccCCCCCcEE
Q psy17244 78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARR---HILRRRYYRQHCTPELGSYTKDLSAISPDLSSIF 154 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~---~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~i 154 (196)
.+...||+.++|+.|.+.+.+++-|++.......+.+.+...+ .+|+.+++.+........+.+-++++| ++.+|
T Consensus 72 ~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v 149 (197)
T PHA02597 72 YLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVC 149 (197)
T ss_pred hccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEE
Confidence 3668999999999999777787777776655555666554331 256777777766544445666777788 78899
Q ss_pred EEECCCccccCCCCc--eEeeceecC
Q psy17244 155 ILDNSPGAYRGFPDN--AIPIKSWFS 178 (196)
Q Consensus 155 iIDD~~~~~~~~~~N--~I~v~~f~~ 178 (196)
+|||+.........+ ||.+..+..
T Consensus 150 ~vgDs~~di~aA~~a~~Gi~~i~~~~ 175 (197)
T PHA02597 150 FVDDLAHNLDAAHEALSQLPVIHMLR 175 (197)
T ss_pred EeCCCHHHHHHHHHHHcCCcEEEecc
Confidence 999999988777788 888777753
No 37
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.54 E-value=2.6e-07 Score=72.50 Aligned_cols=117 Identities=15% Similarity=0.006 Sum_probs=77.5
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch----
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME---- 106 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~---- 106 (196)
.|.++||+||||+.....- .. ..-.+...||+.++|++|+ +.+.++|.|+++.
T Consensus 3 ~~~~~~d~~~t~~~~~~~~--------~~--------------~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~ 60 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGY--------VK--------------SPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARG 60 (181)
T ss_pred ccEEEEECCCCcccCCccc--------cC--------------CHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCC
Confidence 5789999999986553110 00 0012567899999999998 4799999999873
Q ss_pred -----------hhHHHHHHHhcCCCceeeEEEEecCC-----CCCC---CCccccccccCCCCCcEEEEECCCccccCCC
Q psy17244 107 -----------IYGAAVADKLDARRHILRRRYYRQHC-----TPEL---GSYTKDLSAISPDLSSIFILDNSPGAYRGFP 167 (196)
Q Consensus 107 -----------~ya~~vl~~ldp~~~~f~~~l~r~~c-----~~~~---~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~ 167 (196)
.+...+++.++. .|..+++...+ ...+ ..+.+-++.+|.+++++++|+|++.-.....
T Consensus 61 ~~~~~~~~~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~ 137 (181)
T PRK08942 61 LFTEAQLNALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAA 137 (181)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHH
Confidence 333344444432 35566654322 2222 2567788888999999999999997665555
Q ss_pred CceEee
Q psy17244 168 DNAIPI 173 (196)
Q Consensus 168 ~N~I~v 173 (196)
..|+.+
T Consensus 138 ~aG~~~ 143 (181)
T PRK08942 138 AAGVTP 143 (181)
T ss_pred HCCCeE
Confidence 555543
No 38
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.51 E-value=6.4e-08 Score=81.54 Aligned_cols=128 Identities=11% Similarity=0.032 Sum_probs=94.8
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY 108 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y 108 (196)
.+++.+++|+||||........ .++. ...-....|++.++|+.+. +.+.++|.|+.+...
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~----------~~~~---------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~ 216 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSP----------YDWT---------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVC 216 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCc----------cchh---------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhh
Confidence 3567999999999997753211 0110 0012466999999999997 579999999999999
Q ss_pred HHHHHHHhcCCCceeeEEEEecC-------CCCCCC---CccccccccCC-CCCcEEEEECCCccccCCCCceEeecee
Q psy17244 109 GAAVADKLDARRHILRRRYYRQH-------CTPELG---SYTKDLSAISP-DLSSIFILDNSPGAYRGFPDNAIPIKSW 176 (196)
Q Consensus 109 a~~vl~~ldp~~~~f~~~l~r~~-------c~~~~~---~~~KdL~~l~~-~~~~~iiIDD~~~~~~~~~~N~I~v~~f 176 (196)
++.+++.++..+.+|+.+...+. +...++ ...+.|..++. +++.++.|||++........+|+.+...
T Consensus 217 ~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 217 EEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred HHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 99999999987447877766652 222222 34556677777 6799999999999888888899887665
No 39
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.50 E-value=9e-07 Score=68.91 Aligned_cols=108 Identities=21% Similarity=0.250 Sum_probs=72.1
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh--
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI-- 107 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~-- 107 (196)
..+.++||+||||+....... -+.+.. -+..+-||+.+.|+.|. +.+.++|.|+++..
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~-----~~~~~~--------------~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~ 72 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV-----FPTSAS--------------DWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGR 72 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc-----ccCChH--------------HeEEecCCHHHHHHHHHHCCCEEEEEeCCccccc
Confidence 456899999999997642110 001111 12335699999999997 78999999998763
Q ss_pred ----------hHHHHHHHhcCCCceeeEEEEecCCCCC---CCCccccccccC--CCCCcEEEEECCC
Q psy17244 108 ----------YGAAVADKLDARRHILRRRYYRQHCTPE---LGSYTKDLSAIS--PDLSSIFILDNSP 160 (196)
Q Consensus 108 ----------ya~~vl~~ldp~~~~f~~~l~r~~c~~~---~~~~~KdL~~l~--~~~~~~iiIDD~~ 160 (196)
+++.+++.++.. . ...+..+..... .+.+..-++++| .+++++++|.|++
T Consensus 73 ~~~~~~~~~~~i~~~l~~~gl~--~-~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 73 GKLSAESFKNKIEAFLEKLKVP--I-QVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred CcccHHHHHHHHHHHHHHcCCC--E-EEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 577788888864 2 233333332222 224555667777 7899999999997
No 40
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.50 E-value=1.4e-07 Score=75.67 Aligned_cols=98 Identities=9% Similarity=0.129 Sum_probs=70.6
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEec-----------CCCC--CCCCcccccc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQ-----------HCTP--ELGSYTKDLS 144 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~-----------~c~~--~~~~~~KdL~ 144 (196)
+..+||+.++|+.+. +.+.++|.|++...++..+++.++.. .+|+..+..+ .+.. ....+.+-++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD-AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC-ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 568999999999998 57999999999999999999998876 3665433211 1111 1113445566
Q ss_pred ccCCCCCcEEEEECCCccccCCCCceEeeceecC
Q psy17244 145 AISPDLSSIFILDNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f~~ 178 (196)
+++.+++++++|+|+..-.......|+.+ .|.+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~~~ 195 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI-AFNA 195 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE-EeCC
Confidence 77889999999999987665555555655 3544
No 41
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.37 E-value=2.5e-07 Score=76.03 Aligned_cols=144 Identities=13% Similarity=0.063 Sum_probs=83.1
Q ss_pred cCCCCCeEEEEeCCCceeeeecCCCCC-CCCCCCCCCCcEEEEEECC---eeeEEEEeeCccHHHHHHHhh-hCceEEEE
Q psy17244 27 LSIVKRKVLVLDLDETLIHSHHDGITR-PTVKPGTPPDFVLKVTIDR---HPVRFFVHKRPHVDFFLDIVS-QWYELVVF 101 (196)
Q Consensus 27 ~~~~~k~~LVLDLD~TLv~s~~~~~~~-~~~~~~~~~d~~~~~~~~~---~~~~~~v~~RP~l~eFL~~l~-~~yei~I~ 101 (196)
+..+++..++|||||||++|...-... ....+. .-.+.+--.... ....-.....|++.+||+++. +.+.++|-
T Consensus 58 ~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~-~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iV 136 (237)
T TIGR01672 58 LEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPG-SEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFV 136 (237)
T ss_pred cCCCCCeEEEEeCCCccccCcHHHhCCcccCCHH-HhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEE
Confidence 444455599999999999998621000 000000 000000000000 001122344555999999997 68999999
Q ss_pred cCC----chhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEeecee
Q psy17244 102 TAS----MEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPIKSW 176 (196)
Q Consensus 102 T~~----~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f 176 (196)
|+. ...+++.+++.++.. .+|..++..+.....+. .+. ..+. ...-++.|-|+..-+.....+|+.....
T Consensus 137 Tnr~~~k~~~~a~~ll~~lGi~-~~f~~i~~~d~~~~~Kp--~~~-~~l~-~~~i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 137 TGRTPGKTDTVSKTLAKNFHIP-AMNPVIFAGDKPGQYQY--TKT-QWIQ-DKNIRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred eCCCCCcCHHHHHHHHHHhCCc-hheeEEECCCCCCCCCC--CHH-HHHH-hCCCeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 998 667999999999886 47776666554432221 121 1221 2233799999988776665666654443
No 42
>PRK06769 hypothetical protein; Validated
Probab=98.34 E-value=3.8e-07 Score=71.36 Aligned_cols=97 Identities=11% Similarity=0.016 Sum_probs=61.2
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhh-----HHHHHHHhcCCCceeeEEEEe----cCCCCCC---CCccccccc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIY-----GAAVADKLDARRHILRRRYYR----QHCTPEL---GSYTKDLSA 145 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y-----a~~vl~~ldp~~~~f~~~l~r----~~c~~~~---~~~~KdL~~ 145 (196)
+..-||+.++|++|. +.+.++|.|++.... .......+... ++.....+. +.+...+ ..+.+-+++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF-GFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC-CcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 566899999999997 589999999987421 11222223222 122222221 2222222 367788888
Q ss_pred cCCCCCcEEEEECCCccccCCCCceEeecee
Q psy17244 146 ISPDLSSIFILDNSPGAYRGFPDNAIPIKSW 176 (196)
Q Consensus 146 l~~~~~~~iiIDD~~~~~~~~~~N~I~v~~f 176 (196)
++.+++++++|+|++.-.......|+.+..+
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 9999999999999997665555555554433
No 43
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.34 E-value=4.1e-07 Score=79.21 Aligned_cols=145 Identities=23% Similarity=0.336 Sum_probs=99.6
Q ss_pred CCCCCeEEEEeCCCceeeeecCCCCCCCC--CCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCc
Q psy17244 28 SIVKRKVLVLDLDETLIHSHHDGITRPTV--KPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASM 105 (196)
Q Consensus 28 ~~~~k~~LVLDLD~TLv~s~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~ 105 (196)
....+..+|.|+|.|.+|+.......... .-.+.-.+..........+.++++.||++..|+...++.||+.++|.|+
T Consensus 22 ~q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~ 101 (390)
T COG5190 22 RQDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGT 101 (390)
T ss_pred hcCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeecc
Confidence 34577889999999999997543100000 0000001111111223457899999999999999999999999999999
Q ss_pred hhhHHHHHHHhcCCCceeeEEEE-ecCCCCCCCCcccccccc-CCCCCcEEEEECCCccccC--CCCceEeece
Q psy17244 106 EIYGAAVADKLDARRHILRRRYY-RQHCTPELGSYTKDLSAI-SPDLSSIFILDNSPGAYRG--FPDNAIPIKS 175 (196)
Q Consensus 106 ~~ya~~vl~~ldp~~~~f~~~l~-r~~c~~~~~~~~KdL~~l-~~~~~~~iiIDD~~~~~~~--~~~N~I~v~~ 175 (196)
..||+.++..+||.+..|..+.. ++. ..+...|-++++ ..+.+.++++||.+..|.. --.|.+...+
T Consensus 102 ~~~~~~~~~i~d~~g~~~~d~~~~~~~---~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v~~~~ 172 (390)
T COG5190 102 RAYAERIAKIIDPTGKLFNDRILSRDE---SGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFVAKSP 172 (390)
T ss_pred ccchhhhhhcccccccccccccccccc---cccchhhhhhhcCccccccccccccccccCCccchhhhhhcccc
Confidence 99999999999999888875543 322 122345677777 4577889999999999922 2245555555
No 44
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=98.33 E-value=4.1e-07 Score=69.19 Aligned_cols=95 Identities=14% Similarity=0.168 Sum_probs=79.7
Q ss_pred EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCc
Q psy17244 77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSS 152 (196)
Q Consensus 77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~ 152 (196)
......||+.++|+.++ +.+.++|.|+++...+..+++.++.. .+|+.+++.+++...++ .|..-++.+|.++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 45889999999999999 89999999999999999999999887 68999988877766544 567788888999999
Q ss_pred EEEEECCCccccCCCCceEe
Q psy17244 153 IFILDNSPGAYRGFPDNAIP 172 (196)
Q Consensus 153 ~iiIDD~~~~~~~~~~N~I~ 172 (196)
+++|||++.........|+.
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSE
T ss_pred EEEEeCCHHHHHHHHHcCCe
Confidence 99999999765544444443
No 45
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.27 E-value=9.6e-07 Score=72.75 Aligned_cols=99 Identities=9% Similarity=0.105 Sum_probs=83.8
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
.+...||+.++|++|. +.+.++|-|++...+++.+++.++.. .+|+.+++.+.+...++ .+.+-+++++.+++++
T Consensus 106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~-~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 184 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS-DFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHT 184 (248)
T ss_pred cCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh-hhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHE
Confidence 4677899999999996 68999999999999999999999987 68999988887755443 6788889999999999
Q ss_pred EEEECCCccccCCCCceEeeceec
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSWF 177 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f~ 177 (196)
++|+|++.-......+|+.+..+.
T Consensus 185 l~vgDs~~Di~aA~~aGi~~i~v~ 208 (248)
T PLN02770 185 FVFEDSVSGIKAGVAAGMPVVGLT 208 (248)
T ss_pred EEEcCCHHHHHHHHHCCCEEEEEe
Confidence 999999987766667777666553
No 46
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.24 E-value=1.3e-06 Score=71.02 Aligned_cols=93 Identities=10% Similarity=-0.023 Sum_probs=78.7
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i 154 (196)
+...||+.++|+.|. +.+.++|-|++.+.+++..++.++.. .+|+.+++.+.....++ .|.+-++++|.++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD-AHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH-HHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 677899999999998 57999999999999999999988775 58888887776654443 56777889999999999
Q ss_pred EEECCCccccCCCCceEe
Q psy17244 155 ILDNSPGAYRGFPDNAIP 172 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~ 172 (196)
+|+|++.-......+|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999877777777774
No 47
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.23 E-value=1.5e-06 Score=70.28 Aligned_cols=95 Identities=14% Similarity=0.068 Sum_probs=76.5
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i 154 (196)
...-||+.+.|..++ +.|.+.|.|+.....++.+++.++.. .+|+.+...+.+...++ ....-+..+|.+++++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~-~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLA-DYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCc-cccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 568899999999998 78999999999999999999999998 68988887444444443 34566677888878999
Q ss_pred EEECCCccccCCCCceEeec
Q psy17244 155 ILDNSPGAYRGFPDNAIPIK 174 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~v~ 174 (196)
+|=|+..-......+|+...
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred EECCCHHHHHHHHHcCCCEE
Confidence 99999987766666665433
No 48
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=98.22 E-value=5.6e-06 Score=69.06 Aligned_cols=125 Identities=18% Similarity=0.113 Sum_probs=84.5
Q ss_pred cCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-CceEEEEcCCc
Q psy17244 27 LSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-WYELVVFTASM 105 (196)
Q Consensus 27 ~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~ 105 (196)
.....+-.+|||||.|||.+.... -..=|.+-+-|.+|.+ +.-+++||.|.
T Consensus 117 ~~~~~phVIVfDlD~TLItd~~~v----------------------------~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~ 168 (297)
T PF05152_consen 117 LVWEPPHVIVFDLDSTLITDEGDV----------------------------RIRDPAVYDSLRELKEQGCVLVLWSYGN 168 (297)
T ss_pred ccCCCCcEEEEECCCcccccCCcc----------------------------ccCChHHHHHHHHHHHcCCEEEEecCCC
Confidence 334455589999999999876421 1223788899999984 66999999999
Q ss_pred hhhHHHHHHHhcCCCceeeEEEEecCCCCCC----------------CCccccccc-----------------cCCC-CC
Q psy17244 106 EIYGAAVADKLDARRHILRRRYYRQHCTPEL----------------GSYTKDLSA-----------------ISPD-LS 151 (196)
Q Consensus 106 ~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~----------------~~~~KdL~~-----------------l~~~-~~ 151 (196)
+++|...++.++.. ++|..++++.+-.... ..+..|... .|.+ .+
T Consensus 169 ~eHV~~sl~~~~L~-~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~K 247 (297)
T PF05152_consen 169 REHVRHSLKELKLE-GYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFK 247 (297)
T ss_pred HHHHHHHHHHhCCc-cccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceee
Confidence 99999999999988 6898888755332221 112223322 2332 23
Q ss_pred cEEEEECCCccccCCCCceEeeceecCCCC
Q psy17244 152 SIFILDNSPGAYRGFPDNAIPIKSWFSDPS 181 (196)
Q Consensus 152 ~~iiIDD~~~~~~~~~~N~I~v~~f~~~~~ 181 (196)
.+-+|||-+.. ..+-+|-+.|..--...+
T Consensus 248 tiTLVDDL~~N-n~~YD~FVnvkrcp~P~~ 276 (297)
T PF05152_consen 248 TITLVDDLKSN-NYSYDYFVNVKRCPVPVN 276 (297)
T ss_pred eEEEeccCccc-CccceeEEEeccCCCCch
Confidence 56789998864 234477777776654333
No 49
>KOG3109|consensus
Probab=98.21 E-value=1.6e-06 Score=69.79 Aligned_cols=89 Identities=12% Similarity=0.179 Sum_probs=72.1
Q ss_pred EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCC---------CCCCCccccccccCCC
Q psy17244 79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCT---------PELGSYTKDLSAISPD 149 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~---------~~~~~~~KdL~~l~~~ 149 (196)
++.-|-|+++|-.|.+.. .++||+|.+..|..++..|+.. .+|..+.+.+... .....|.+-.+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGie-DcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIE-DCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChH-HhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 677788999999998766 9999999999999999999998 6898888765333 3334667777777876
Q ss_pred -CCcEEEEECCCccccCCCCc
Q psy17244 150 -LSSIFILDNSPGAYRGFPDN 169 (196)
Q Consensus 150 -~~~~iiIDD~~~~~~~~~~N 169 (196)
+++|+++|||........+=
T Consensus 177 ~p~~t~FfDDS~~NI~~ak~v 197 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTAKEV 197 (244)
T ss_pred CcCceEEEcCchhhHHHHHhc
Confidence 99999999999877654433
No 50
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.20 E-value=1.8e-06 Score=69.17 Aligned_cols=98 Identities=11% Similarity=0.098 Sum_probs=79.0
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
++.+.||+.++|++|. +.+.++|.|++...++...++.++.. .+|+.+++.+.....++ .|.+-++++|.+++++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR-DFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH-HhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 4678999999999998 56999999999999999999999886 68988888877665443 6778889999999999
Q ss_pred EEEECCC-ccccCCCCceEeecee
Q psy17244 154 FILDNSP-GAYRGFPDNAIPIKSW 176 (196)
Q Consensus 154 iiIDD~~-~~~~~~~~N~I~v~~f 176 (196)
|+|+|++ .-.......|+.+.-+
T Consensus 171 ~~igDs~~~di~~A~~aG~~~i~~ 194 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKNLGMKTVWI 194 (221)
T ss_pred EEECCChHHHHHHHHHCCCEEEEE
Confidence 9999998 4554444555544433
No 51
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.20 E-value=4.6e-07 Score=70.57 Aligned_cols=88 Identities=9% Similarity=0.137 Sum_probs=62.8
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC-----------------CCCCcc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP-----------------ELGSYT 140 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~-----------------~~~~~~ 140 (196)
+.++||+.++|+.+. +.+.++|.|++...+++.+++.++.. .+|..+++.+.... ......
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK-DVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh-hheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 689999999999997 57999999999999999999998765 57777765432111 111112
Q ss_pred c--cccccCCC-CCcEEEEECCCccccCCC
Q psy17244 141 K--DLSAISPD-LSSIFILDNSPGAYRGFP 167 (196)
Q Consensus 141 K--dL~~l~~~-~~~~iiIDD~~~~~~~~~ 167 (196)
| -++.+... ++++|+|+|+..-.....
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~ 179 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAK 179 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHh
Confidence 3 33333334 788999999997665443
No 52
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.19 E-value=2e-06 Score=68.41 Aligned_cols=98 Identities=7% Similarity=-0.031 Sum_probs=81.1
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~ 153 (196)
.+...||+.++|++|. +.+.++|.|++...++..+++.++.. .+|+.+++.+++...+ ..+.+-++++|.+++++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL-PLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh-hheeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 4678999999999997 68999999999999999999999887 5888888877664433 25667788889999999
Q ss_pred EEEECCCccccCCCCceEeecee
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSW 176 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f 176 (196)
++|+|++.-......+|+.+...
T Consensus 152 l~igD~~~Di~aA~~~Gi~~i~~ 174 (205)
T TIGR01454 152 VMVGDAVTDLASARAAGTATVAA 174 (205)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEE
Confidence 99999997777777777765543
No 53
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.19 E-value=1.5e-06 Score=67.32 Aligned_cols=92 Identities=15% Similarity=0.211 Sum_probs=73.2
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~i 154 (196)
+...||+.++|+.++ +.+.++|.|++.... ..+...++.. .+|+.+++.+.+...+ ..|..-++++|.++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~-~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR-DLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH-HHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 678999999999998 589999999999998 6666667776 5788888776665544 256777888899999999
Q ss_pred EEECCCccccCCCCceEe
Q psy17244 155 ILDNSPGAYRGFPDNAIP 172 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~ 172 (196)
+|||++.........|+.
T Consensus 162 ~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999999766555555553
No 54
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=98.18 E-value=1.5e-06 Score=69.01 Aligned_cols=104 Identities=15% Similarity=0.110 Sum_probs=82.1
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
+....||+.++|+.+. +.+.++|-|++....+..++.....-..+|+.+++.+++...++ .|..-++++|.+++++
T Consensus 82 ~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 161 (199)
T PRK09456 82 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADA 161 (199)
T ss_pred HhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHe
Confidence 3567999999999997 67999999999988776655442211257888888887776544 6778889999999999
Q ss_pred EEEECCCccccCCCCceEeeceecCCCC
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSWFSDPS 181 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f~~~~~ 181 (196)
++|||++.........|+....+.+...
T Consensus 162 l~vgD~~~di~aA~~aG~~~i~~~~~~~ 189 (199)
T PRK09456 162 VFFDDNADNIEAANALGITSILVTDKQT 189 (199)
T ss_pred EEeCCCHHHHHHHHHcCCEEEEecCCcc
Confidence 9999999887777788998877766433
No 55
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.16 E-value=4e-06 Score=67.70 Aligned_cols=95 Identities=12% Similarity=0.101 Sum_probs=63.6
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC-CceeeEE--EEecCCCCCC------------C-Ccc
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR-RHILRRR--YYRQHCTPEL------------G-SYT 140 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~-~~~f~~~--l~r~~c~~~~------------~-~~~ 140 (196)
.+.++||+.+||+++. +.+.++|.|++...+++.+++.+ .. ..++... +..+.....+ + ...
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~ 150 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP 150 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence 3688999999999998 67999999999999999999987 32 1243222 2111111000 0 112
Q ss_pred ccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244 141 KDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI 173 (196)
Q Consensus 141 KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v 173 (196)
.-++.++...+++|.|.|+..-.......++.+
T Consensus 151 ~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~ 183 (219)
T PRK09552 151 SLIRKLSDTNDFHIVIGDSITDLEAAKQADKVF 183 (219)
T ss_pred HHHHHhccCCCCEEEEeCCHHHHHHHHHCCcce
Confidence 455566778889999999987665444455533
No 56
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=98.12 E-value=1.8e-06 Score=68.22 Aligned_cols=96 Identities=10% Similarity=0.096 Sum_probs=78.8
Q ss_pred EeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i 154 (196)
+...||+.++|++|++ .+.++|.|++...++..+++.++.. .+|+.+++.++....++ .|..-++++|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD-DPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh-hhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 5678999999999996 6999999999999999999998875 58998888876654433 56778888999999999
Q ss_pred EEECCCccccCCCCceEeece
Q psy17244 155 ILDNSPGAYRGFPDNAIPIKS 175 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~v~~ 175 (196)
+|+|++.-......+|+...-
T Consensus 170 ~vgD~~~Di~~A~~~G~~~i~ 190 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKTAW 190 (198)
T ss_pred EEeCCHHHHHHHHHCCCcEEE
Confidence 999999766555666665443
No 57
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.12 E-value=2.5e-06 Score=67.92 Aligned_cols=99 Identities=8% Similarity=-0.021 Sum_probs=80.7
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
.+...||+.++|+.|. +.+.++|.|++...+++.+++.++.. .+|..++..+.....++ .+.+-++++|.+++++
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 161 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA-KYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM 161 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH-hhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence 4678999999999997 67999999999999999999999886 57887777665443332 5677888899999999
Q ss_pred EEEECCCccccCCCCceEeeceec
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSWF 177 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f~ 177 (196)
++|+|++.-.......|+.+..+.
T Consensus 162 ~~igDs~~d~~aa~~aG~~~i~v~ 185 (213)
T TIGR01449 162 VYVGDSRVDIQAARAAGCPSVLLT 185 (213)
T ss_pred EEeCCCHHHHHHHHHCCCeEEEEc
Confidence 999999987766666777665543
No 58
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.09 E-value=1.4e-06 Score=68.24 Aligned_cols=92 Identities=13% Similarity=0.175 Sum_probs=75.0
Q ss_pred EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC-------CCCCccccccccCCCCC
Q psy17244 79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP-------ELGSYTKDLSAISPDLS 151 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~-------~~~~~~KdL~~l~~~~~ 151 (196)
+...||+.++|++|. +.++|.|+++...+..+++.++.. .+|+.++..+.... +...|..-++++|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIE-DCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcH-hhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 457899999999998 689999999999999999999876 68998888766543 23367788888999999
Q ss_pred cEEEEECCCccccCCCCceEee
Q psy17244 152 SIFILDNSPGAYRGFPDNAIPI 173 (196)
Q Consensus 152 ~~iiIDD~~~~~~~~~~N~I~v 173 (196)
++++|+|++........+|+.+
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCEE
Confidence 9999999997665555666543
No 59
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.08 E-value=1.8e-05 Score=68.73 Aligned_cols=124 Identities=16% Similarity=0.124 Sum_probs=82.6
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-----
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS----- 104 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~----- 104 (196)
+++.|+||-||||+...... |.. .....+...||+.++|++|. +.+.++|.|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~-------------y~~-------~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~ 60 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD-------------FQV-------DSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGT 60 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc-------------ccc-------cCcccceECcCHHHHHHHHHhCCCeEEEEECCccccC
Confidence 46799999999999875211 000 01123788999999999998 57999999995
Q ss_pred ----------chhhHHHHHHHhcCCCceeeEEEEe-----cCCCCCCC---CccccccccCCCCCcEEEEECCCccccCC
Q psy17244 105 ----------MEIYGAAVADKLDARRHILRRRYYR-----QHCTPELG---SYTKDLSAISPDLSSIFILDNSPGAYRGF 166 (196)
Q Consensus 105 ----------~~~ya~~vl~~ldp~~~~f~~~l~r-----~~c~~~~~---~~~KdL~~l~~~~~~~iiIDD~~~~~~~~ 166 (196)
...++..+++.++.. |..+++. +.|...++ .+..-++.++.+++++++|-|+..-....
T Consensus 61 ~~~~~~~l~~~~~~i~~iL~~~gl~---fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aA 137 (354)
T PRK05446 61 DSFPQEDFDPPHNLMMQIFESQGIK---FDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLA 137 (354)
T ss_pred ccccHHHHhhHHHHHHHHHHHcCCc---eeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH
Confidence 244555566665542 5555443 34433332 33344556688999999999998766666
Q ss_pred CCceEeeceec
Q psy17244 167 PDNAIPIKSWF 177 (196)
Q Consensus 167 ~~N~I~v~~f~ 177 (196)
..+|+...-..
T Consensus 138 k~aGi~~I~v~ 148 (354)
T PRK05446 138 ENMGIKGIRYA 148 (354)
T ss_pred HHCCCeEEEEE
Confidence 66666655443
No 60
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=98.07 E-value=3.6e-06 Score=67.36 Aligned_cols=96 Identities=8% Similarity=0.058 Sum_probs=78.4
Q ss_pred EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---Ccccccccc-CCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAI-SPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l-~~~~~~~i 154 (196)
+..+||+.++|+++.+.+.++|-|++....+..+++.++.. .+|+.+++.+.+...++ .+.+-++++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~-~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLF-PFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcH-hhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 67899999999999966999999999999999999998876 58999888777665443 577888899 99999999
Q ss_pred EEECCC-ccccCCCCceEeece
Q psy17244 155 ILDNSP-GAYRGFPDNAIPIKS 175 (196)
Q Consensus 155 iIDD~~-~~~~~~~~N~I~v~~ 175 (196)
+|+|++ .-......+|+...-
T Consensus 175 ~igD~~~~di~~A~~~G~~~i~ 196 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDTCW 196 (224)
T ss_pred EECCCcHHHHHHHHHCCCcEEE
Confidence 999997 455555555654433
No 61
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.06 E-value=4.5e-06 Score=64.04 Aligned_cols=111 Identities=12% Similarity=0.087 Sum_probs=74.8
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA 111 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~ 111 (196)
+.++||+||||+.....- ..++ +..-.+.++|+. -+++|. +.+.++|-|+.....+..
T Consensus 2 ~~~~~D~Dgtl~~~~~~~------------------~~~~-~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~ 60 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYY------------------TNNG-EEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVED 60 (154)
T ss_pred eEEEEeCceeEEcCeEEE------------------CCCC-cEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHH
Confidence 578999999999643100 0000 111224677776 788887 689999999999999999
Q ss_pred HHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceE
Q psy17244 112 VADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAI 171 (196)
Q Consensus 112 vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I 171 (196)
+++.++.. .+|.. .......+.+-++.+|.++++++.|-|+..-.......++
T Consensus 61 ~l~~~gi~-~~~~~------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 113 (154)
T TIGR01670 61 RCKTLGIT-HLYQG------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGL 113 (154)
T ss_pred HHHHcCCC-EEEec------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 99999876 45542 1112224445567778899999999999875544333333
No 62
>PRK09449 dUMP phosphatase; Provisional
Probab=98.04 E-value=4.9e-06 Score=66.98 Aligned_cols=94 Identities=10% Similarity=0.079 Sum_probs=76.4
Q ss_pred EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCC-CCCcEE
Q psy17244 79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISP-DLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~-~~~~~i 154 (196)
+...||+.++|+.|.+.+.++|-|++....++..++.++.. .+|+.+++.+++...++ .+.+-++++|. ++++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLR-DYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChH-HHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 56889999999999988999999999999999999998876 58999988887765543 67788888986 458999
Q ss_pred EEECCCc-cccCCCCceEee
Q psy17244 155 ILDNSPG-AYRGFPDNAIPI 173 (196)
Q Consensus 155 iIDD~~~-~~~~~~~N~I~v 173 (196)
+|+|++. -......+|+.+
T Consensus 173 ~vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 173 MVGDNLHSDILGGINAGIDT 192 (224)
T ss_pred EEcCCcHHHHHHHHHCCCcE
Confidence 9999984 555555555543
No 63
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.00 E-value=2e-05 Score=71.66 Aligned_cols=111 Identities=17% Similarity=0.192 Sum_probs=75.8
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch--
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME-- 106 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~-- 106 (196)
.+.+++.||+||||+....... -+....| +..+-||+.+.|+.|. +.|.|+|+|+...
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~-----~~~~~~d--------------~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~ 226 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKV-----FPKGPDD--------------WQIIFPEIPEKLKELEADGFKICIFTNQGGIA 226 (526)
T ss_pred ccCcEEEEECCCCccccCCCcc-----CCCCHHH--------------eeecccCHHHHHHHHHHCCCEEEEEECCcccc
Confidence 3568999999999997642110 0111111 2335699999999998 6899999999776
Q ss_pred ----------hhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCcccccccc----CCCCCcEEEEECCCcc
Q psy17244 107 ----------IYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAI----SPDLSSIFILDNSPGA 162 (196)
Q Consensus 107 ----------~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l----~~~~~~~iiIDD~~~~ 162 (196)
..+..+++.++.. |...+..+.|.+.+ +++..-++.+ +.+++++++|-|+..-
T Consensus 227 ~G~~~~~~~~~ki~~iL~~lgip---fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr 296 (526)
T TIGR01663 227 RGKINADDFKAKIEAIVAKLGVP---FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGR 296 (526)
T ss_pred cCcccHHHHHHHHHHHHHHcCCc---eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccc
Confidence 4688888888753 66555555555443 2443333444 4789999999999854
No 64
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.98 E-value=3.5e-06 Score=65.53 Aligned_cols=92 Identities=7% Similarity=0.049 Sum_probs=74.9
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i 154 (196)
+...||+.++|+.|. +.+.++|-|++ .+++.+++.++.. .+|+.++..+.+...++ .+.+-+++++.+++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~-~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT-DYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH-HHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 678999999999997 57999999988 7899999988876 57888888776654433 45677788899999999
Q ss_pred EEECCCccccCCCCceEee
Q psy17244 155 ILDNSPGAYRGFPDNAIPI 173 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~v 173 (196)
+|+|++.-......+|+.+
T Consensus 164 ~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMFA 182 (185)
T ss_pred EEeCcHhhHHHHHHCCCeE
Confidence 9999998776666666654
No 65
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.95 E-value=2.3e-05 Score=64.49 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=77.5
Q ss_pred CCCCeEEEEeCCCceeeeecCCCC-CCCCCCCCCCCcEEEE-EE-C--CeeeEEEEeeCccHHHHHHHhh-hCceEEEEc
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGIT-RPTVKPGTPPDFVLKV-TI-D--RHPVRFFVHKRPHVDFFLDIVS-QWYELVVFT 102 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~-~~~~~~~~~~d~~~~~-~~-~--~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T 102 (196)
.+++..++||+|||+++++..... ...+.++ ..+| +.- .. + ...........||+.+||+.+. +.++|++-|
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~-~~~y-~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVT 137 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPG-SEDY-LKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFIT 137 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCC-cccc-cChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEe
Confidence 344569999999999997532110 0111111 1111 000 00 0 0012334566777999999995 899999999
Q ss_pred CC----chhhHHHHHHHhcC-CCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244 103 AS----MEIYGAAVADKLDA-RRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAIPI 173 (196)
Q Consensus 103 ~~----~~~ya~~vl~~ldp-~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v 173 (196)
+. ....++.+++.++. ...+|..++..+.. ..... ..-++ ...-+|+|-|+..-+.....+|+..
T Consensus 138 nR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~-~K~~K-~~~l~----~~~i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 138 GRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP-GQYTK-TQWLK----KKNIRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-CCCCH-HHHHH----hcCCeEEEcCCHHHHHHHHHcCCcE
Confidence 94 46688888887766 12467655555432 11111 11111 2233899999987766555555544
No 66
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.95 E-value=8.5e-06 Score=67.00 Aligned_cols=98 Identities=6% Similarity=-0.090 Sum_probs=80.8
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCcee-eEEEEecCCCCCCC---CccccccccCCC-CCc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHIL-RRRYYRQHCTPELG---SYTKDLSAISPD-LSS 152 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f-~~~l~r~~c~~~~~---~~~KdL~~l~~~-~~~ 152 (196)
+...||+.++|++|. +.+.++|-|++...+++.+++.++.. .+| +.+++.+.....++ .+.+-++++|.. +++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~-~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 176 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ-GYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA 176 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc-CCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence 577899999999997 67999999999999999999999876 454 77787776554433 677888889974 899
Q ss_pred EEEEECCCccccCCCCceEeeceec
Q psy17244 153 IFILDNSPGAYRGFPDNAIPIKSWF 177 (196)
Q Consensus 153 ~iiIDD~~~~~~~~~~N~I~v~~f~ 177 (196)
+|+|.|++.-......+|+.+....
T Consensus 177 ~l~IGDs~~Di~aA~~aGi~~i~v~ 201 (253)
T TIGR01422 177 CVKVGDTVPDIEEGRNAGMWTVGLI 201 (253)
T ss_pred eEEECCcHHHHHHHHHCCCeEEEEe
Confidence 9999999987777777787766664
No 67
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.91 E-value=8.3e-06 Score=64.67 Aligned_cols=86 Identities=9% Similarity=0.107 Sum_probs=59.0
Q ss_pred EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEec-CC---CCC--CC-CccccccccCCCC
Q psy17244 78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQ-HC---TPE--LG-SYTKDLSAISPDL 150 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~-~c---~~~--~~-~~~KdL~~l~~~~ 150 (196)
.+...||+.++|+.+.+.+.++|-|++...+++.+++.++.. .+|...+.-+ .. ... .+ ....-++.++...
T Consensus 66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWP-TLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCc-hhhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 356789999999999855999999999999999999998875 4665443221 10 000 11 1112233344556
Q ss_pred CcEEEEECCCcccc
Q psy17244 151 SSIFILDNSPGAYR 164 (196)
Q Consensus 151 ~~~iiIDD~~~~~~ 164 (196)
++++.|-|+..-..
T Consensus 145 ~~~v~iGDs~~D~~ 158 (205)
T PRK13582 145 YRVIAAGDSYNDTT 158 (205)
T ss_pred CeEEEEeCCHHHHH
Confidence 88999999997543
No 68
>PLN02954 phosphoserine phosphatase
Probab=97.88 E-value=3.2e-05 Score=62.22 Aligned_cols=91 Identities=7% Similarity=0.051 Sum_probs=60.1
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEEEecC-------------CCC-CCC-Cccc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRYYRQH-------------CTP-ELG-SYTK 141 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l~r~~-------------c~~-~~~-~~~K 141 (196)
..++||+.++|+.+. +.+.++|-|++...+++.+++.++... .+|...+..+. |.. .+. ...+
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 457899999999997 679999999999999999999987642 36654332111 110 011 1112
Q ss_pred cccccCCCCCcEEEEECCCccccCCCCceE
Q psy17244 142 DLSAISPDLSSIFILDNSPGAYRGFPDNAI 171 (196)
Q Consensus 142 dL~~l~~~~~~~iiIDD~~~~~~~~~~N~I 171 (196)
-++.++ .+++|+|-|+..-......+++
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~ 190 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGA 190 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCC
Confidence 222233 4789999999987765444334
No 69
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=97.88 E-value=4.8e-06 Score=66.46 Aligned_cols=100 Identities=9% Similarity=-0.029 Sum_probs=75.1
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhh--HHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCC
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIY--GAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLS 151 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y--a~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~ 151 (196)
.+...||+.++|++|. +.+.++|.|++.... +...+...+.. .+|+.++..+.+...+ ..|..-++++|.+++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4668999999999998 579999999987655 33333333333 5788887766554433 367788899999999
Q ss_pred cEEEEECCCccccCCCCceEeeceecC
Q psy17244 152 SIFILDNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 152 ~~iiIDD~~~~~~~~~~N~I~v~~f~~ 178 (196)
++++|||++.........|+....+.+
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 999999999887777778887776654
No 70
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=97.78 E-value=2.3e-05 Score=63.73 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=74.1
Q ss_pred EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHh---cCCCceeeEEEEecCCCC-CCCCccccccccCCCCC
Q psy17244 77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKL---DARRHILRRRYYRQHCTP-ELGSYTKDLSAISPDLS 151 (196)
Q Consensus 77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~l---dp~~~~f~~~l~r~~c~~-~~~~~~KdL~~l~~~~~ 151 (196)
....+.||+.++|+++. +.+.++|+|+++....+.+++.. +.. .+|+..+....+.. +...|.+-++++|.+++
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~-~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~ 170 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT-PYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPR 170 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh-hhcceEEEeCcccCCCHHHHHHHHHHhCcChh
Confidence 34568999999999997 68999999999999999888875 322 35655443222221 22377888999999999
Q ss_pred cEEEEECCCccccCCCCceEeeceec
Q psy17244 152 SIFILDNSPGAYRGFPDNAIPIKSWF 177 (196)
Q Consensus 152 ~~iiIDD~~~~~~~~~~N~I~v~~f~ 177 (196)
++++|+|++.-.......|+.+.-..
T Consensus 171 e~lfVgDs~~Di~AA~~AG~~ti~v~ 196 (220)
T TIGR01691 171 EILFLSDIINELDAARKAGLHTGQLV 196 (220)
T ss_pred HEEEEeCCHHHHHHHHHcCCEEEEEE
Confidence 99999999987666666666654443
No 71
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.78 E-value=3.9e-05 Score=61.57 Aligned_cols=94 Identities=10% Similarity=0.057 Sum_probs=79.1
Q ss_pred EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244 78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF 154 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i 154 (196)
.+..-|++.++|+.+.+.|.++|.|+|...++...+..++.. .+|+.+++.+..+..++ .|..-++++|.++++++
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~-~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLL-DYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCCh-hhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 378889999999999866999999999999999999999965 79999999888876553 67888999999999999
Q ss_pred EEECCCccc-cCCCCceEe
Q psy17244 155 ILDNSPGAY-RGFPDNAIP 172 (196)
Q Consensus 155 iIDD~~~~~-~~~~~N~I~ 172 (196)
+|||+...- .....-|+.
T Consensus 176 ~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 176 FVGDSLENDILGARALGMK 194 (229)
T ss_pred EECCChhhhhHHHHhcCcE
Confidence 999999866 333344443
No 72
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.74 E-value=2.5e-05 Score=62.66 Aligned_cols=94 Identities=13% Similarity=0.070 Sum_probs=74.5
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
....+||+.++|+.+. +.+.++|.|++...++..+++.++.. .+|+..+..+.+...++ .+.+-+++++.+++++
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA-DYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM 169 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc-cCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence 4678999999999998 57999999999999999999999876 57877666655443322 4567778889999999
Q ss_pred EEEECCCccccCCCCceEe
Q psy17244 154 FILDNSPGAYRGFPDNAIP 172 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~ 172 (196)
++|+|++.-.......|+.
T Consensus 170 i~igD~~~Di~~a~~~g~~ 188 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCP 188 (226)
T ss_pred EEECCCHHHHHHHHHCCCc
Confidence 9999998766555555553
No 73
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.74 E-value=4e-05 Score=63.65 Aligned_cols=99 Identities=7% Similarity=-0.106 Sum_probs=78.6
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCC-CCcE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPD-LSSI 153 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~-~~~~ 153 (196)
+..-||+.++|+.|. +.+.++|-|++....+..+++.++..+..++.+++.++....+ ..+.+-++++|.. ++++
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 567899999999997 6899999999999999999998776532347777777655443 2677888889975 6999
Q ss_pred EEEECCCccccCCCCceEeeceec
Q psy17244 154 FILDNSPGAYRGFPDNAIPIKSWF 177 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I~v~~f~ 177 (196)
|+|+|++.-......+|+.+....
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v~ 203 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGVI 203 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEEc
Confidence 999999987777777777665554
No 74
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=97.74 E-value=3.9e-05 Score=59.35 Aligned_cols=124 Identities=18% Similarity=0.211 Sum_probs=89.2
Q ss_pred CCCcccccccCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCc
Q psy17244 18 PLSPLSRHRLSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWY 96 (196)
Q Consensus 18 ~~~p~~~~~~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~y 96 (196)
.+.-+.+..+...+-+.+|+|||+|||-=... ..-|-+.+-+.++. +..
T Consensus 14 tv~~i~~~~L~~~Gikgvi~DlDNTLv~wd~~------------------------------~~tpe~~~W~~e~k~~gi 63 (175)
T COG2179 14 TVFDITPDILKAHGIKGVILDLDNTLVPWDNP------------------------------DATPELRAWLAELKEAGI 63 (175)
T ss_pred hHhhCCHHHHHHcCCcEEEEeccCceecccCC------------------------------CCCHHHHHHHHHHHhcCC
Confidence 44445556777789999999999999954321 22588899999998 579
Q ss_pred eEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCc--cccCCC--CceEe
Q psy17244 97 ELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPG--AYRGFP--DNAIP 172 (196)
Q Consensus 97 ei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~--~~~~~~--~N~I~ 172 (196)
.++|.|++++.-+..++..+|.. ++. + .-......+.+-|...+-++++|++|=|.-. +...+. --.|.
T Consensus 64 ~v~vvSNn~e~RV~~~~~~l~v~--fi~----~-A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIl 136 (175)
T COG2179 64 KVVVVSNNKESRVARAAEKLGVP--FIY----R-AKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTIL 136 (175)
T ss_pred EEEEEeCCCHHHHHhhhhhcCCc--eee----c-ccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEE
Confidence 99999999999999999999976 221 1 1111223567888889999999999999874 222222 23566
Q ss_pred eceecC
Q psy17244 173 IKSWFS 178 (196)
Q Consensus 173 v~~f~~ 178 (196)
|+|-..
T Consensus 137 V~Pl~~ 142 (175)
T COG2179 137 VEPLVA 142 (175)
T ss_pred EEEecc
Confidence 666664
No 75
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.73 E-value=5.5e-05 Score=64.97 Aligned_cols=96 Identities=7% Similarity=0.073 Sum_probs=66.4
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE-------ec---CCCCC--CC-Cccccc
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYY-------RQ---HCTPE--LG-SYTKDL 143 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~-------r~---~c~~~--~~-~~~KdL 143 (196)
.+.++||+.++++.|. ..+.++|.|++...+++.+.+.++.. ..+...+- .. .+... +. .+..-+
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld-~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la 257 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD-AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLA 257 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC-eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHH
Confidence 3678999999999998 67999999999999999999988765 23332221 11 11111 11 223344
Q ss_pred cccCCCCCcEEEEECCCccccCCCCceEeec
Q psy17244 144 SAISPDLSSIFILDNSPGAYRGFPDNAIPIK 174 (196)
Q Consensus 144 ~~l~~~~~~~iiIDD~~~~~~~~~~N~I~v~ 174 (196)
+.+|.++++||.|-|+..-..+....|+.|.
T Consensus 258 ~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 258 QEYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HHcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 6678899999999999976655444455443
No 76
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=97.71 E-value=3.2e-05 Score=61.25 Aligned_cols=91 Identities=11% Similarity=0.009 Sum_probs=70.4
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~i 154 (196)
+..-||+.++|+.|+ +.+.++|.|++... +..+++.++.. .+|..++..+++...++ .+.+-++.+|.+++++|
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~-~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 181 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLL-EYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEAL 181 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcH-HhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 367899999999998 57999999998875 47788887765 58888888777665443 56778888999999999
Q ss_pred EEECCC-ccccCCCCceE
Q psy17244 155 ILDNSP-GAYRGFPDNAI 171 (196)
Q Consensus 155 iIDD~~-~~~~~~~~N~I 171 (196)
+|+|++ .-.......|+
T Consensus 182 ~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 182 HIGDSLRNDYQGARAAGW 199 (203)
T ss_pred EECCCchHHHHHHHHcCC
Confidence 999997 33443334444
No 77
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.71 E-value=4.2e-05 Score=64.51 Aligned_cols=98 Identities=13% Similarity=0.034 Sum_probs=74.4
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC--CceeeEEEEecCCCCCCC---CccccccccCCCCCc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR--RHILRRRYYRQHCTPELG---SYTKDLSAISPDLSS 152 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~--~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~ 152 (196)
+.+.||+.++|+.|. +.+.++|-|++...++..+++.+... ...|..+ ..+.+...++ .+.+-++.+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 578999999999998 68999999999999999999876321 1233333 5555544332 567788889999999
Q ss_pred EEEEECCCccccCCCCceEeeceec
Q psy17244 153 IFILDNSPGAYRGFPDNAIPIKSWF 177 (196)
Q Consensus 153 ~iiIDD~~~~~~~~~~N~I~v~~f~ 177 (196)
+|+|+|++.-+.....+|+.+....
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~ 246 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTK 246 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEc
Confidence 9999999987776667776665554
No 78
>PRK08238 hypothetical protein; Validated
Probab=97.69 E-value=0.0001 Score=66.48 Aligned_cols=90 Identities=21% Similarity=0.095 Sum_probs=59.6
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC--CccccccccCCCCCcEEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG--SYTKDLSAISPDLSSIFI 155 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~--~~~KdL~~l~~~~~~~ii 155 (196)
...+|++.++++++. ++..++|-|++.+.+++++++.++. |+.++..+.....++ .-..-.+.++ .++++.
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~y 144 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDY 144 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeE
Confidence 457899999999997 7899999999999999999999864 666776554332222 1111112223 355778
Q ss_pred EECCCcccc--CCCCceEeec
Q psy17244 156 LDNSPGAYR--GFPDNAIPIK 174 (196)
Q Consensus 156 IDD~~~~~~--~~~~N~I~v~ 174 (196)
+-|+..-.. ..-+|.+.|.
T Consensus 145 vGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 145 AGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred ecCCHHHHHHHHhCCCeEEEC
Confidence 888875332 2234555544
No 79
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.66 E-value=0.00011 Score=58.17 Aligned_cols=81 Identities=9% Similarity=0.051 Sum_probs=67.3
Q ss_pred eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244 80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI 155 (196)
Q Consensus 80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii 155 (196)
...|+..++|+.|. +.+.++|.|++...+++.+++.++.. .+|+.+++.+.... ++ .+.+-++.+|.+++++|+
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~-~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE-ILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch-hhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEE
Confidence 34556699999998 57999999999999999999999887 68988888776544 32 567778888999999999
Q ss_pred EECCCcc
Q psy17244 156 LDNSPGA 162 (196)
Q Consensus 156 IDD~~~~ 162 (196)
|+|++.-
T Consensus 184 vGD~~~D 190 (197)
T TIGR01548 184 VGDTVDD 190 (197)
T ss_pred EeCCHHH
Confidence 9999753
No 80
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.65 E-value=2.8e-05 Score=60.39 Aligned_cols=93 Identities=10% Similarity=0.068 Sum_probs=72.2
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC---CCccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL---GSYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~---~~~~KdL~~l~~~~~~~i 154 (196)
....||+.++|+.|. +.+.++|-|++. .+..+++.++.. .+|+.++..++-...+ ..+.+-+++++.+++++|
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~-~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLI-DYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcH-hhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 367899999999997 679999999864 467788888876 5788887765443332 256788888999999999
Q ss_pred EEECCCccccCCCCceEeec
Q psy17244 155 ILDNSPGAYRGFPDNAIPIK 174 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~v~ 174 (196)
+|+|++.-+.....+|+.+.
T Consensus 163 ~vgD~~~di~aA~~aG~~~i 182 (185)
T TIGR01990 163 GIEDAQAGIEAIKAAGMFAV 182 (185)
T ss_pred EEecCHHHHHHHHHcCCEEE
Confidence 99999977766666676543
No 81
>PLN02811 hydrolase
Probab=97.61 E-value=6.1e-05 Score=60.71 Aligned_cols=98 Identities=5% Similarity=0.041 Sum_probs=73.4
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHH-HHHhcCCCceeeEEEEec--CCCCCC---CCccccccccC---C
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAV-ADKLDARRHILRRRYYRQ--HCTPEL---GSYTKDLSAIS---P 148 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~v-l~~ldp~~~~f~~~l~r~--~c~~~~---~~~~KdL~~l~---~ 148 (196)
+.+.||+.++|+.|+ ..+.++|-|++.+.++... .+..... .+|..+++.+ ++...+ ..|.+-+++++ .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 567899999999998 5899999999988766543 3322333 4788888887 554433 36677777775 8
Q ss_pred CCCcEEEEECCCccccCCCCceEeeceec
Q psy17244 149 DLSSIFILDNSPGAYRGFPDNAIPIKSWF 177 (196)
Q Consensus 149 ~~~~~iiIDD~~~~~~~~~~N~I~v~~f~ 177 (196)
+++++|+|+|+..-......+|+.+....
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v~ 184 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMVP 184 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEEe
Confidence 89999999999987777777777766654
No 82
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.59 E-value=0.00026 Score=52.75 Aligned_cols=73 Identities=19% Similarity=0.112 Sum_probs=51.3
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH-
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA- 110 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~- 110 (196)
+.+++|+||||+...... +. .....+.+.+.|+++. +.++++++|+-+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~-------------y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~ 56 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGD-------------YA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEG 56 (126)
T ss_pred CEEEEeCCCCcccCCCCc-------------cc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhc
Confidence 589999999997542100 00 1346788899999984 79999999999888766
Q ss_pred -----------HHHHHhcCCCceeeEEEEec
Q psy17244 111 -----------AVADKLDARRHILRRRYYRQ 130 (196)
Q Consensus 111 -----------~vl~~ldp~~~~f~~~l~r~ 130 (196)
.+.+.|+.++-.+..++.+.
T Consensus 57 n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 57 NVGKINIHTLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred cccccchhhHHHHHHHHHHcCCCCceEEeCC
Confidence 66777766654455555543
No 83
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.56 E-value=9.8e-05 Score=72.48 Aligned_cols=98 Identities=5% Similarity=-0.049 Sum_probs=83.1
Q ss_pred eCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEEE
Q psy17244 81 KRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFIL 156 (196)
Q Consensus 81 ~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~iiI 156 (196)
.-||+.++|++|. +.+.++|.|++...+++.+++.++....+|+.+++.+++...++ .|..-+++++.+++++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 5799999999997 68999999999999999999998864357898888887765443 6788889999999999999
Q ss_pred ECCCccccCCCCceEeeceecC
Q psy17244 157 DNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 157 DD~~~~~~~~~~N~I~v~~f~~ 178 (196)
+|++.-+......|+.+..+..
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~~ 263 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVTT 263 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEECC
Confidence 9999877777777777666654
No 84
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.53 E-value=0.00014 Score=59.69 Aligned_cols=96 Identities=14% Similarity=0.071 Sum_probs=66.8
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG 109 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya 109 (196)
+-..++||+||||++.. ..-||+.++|++|. +.+.++|.|+++++.+
T Consensus 7 ~~~~~~~D~dG~l~~~~--------------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~ 54 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGN--------------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIF 54 (242)
T ss_pred cCCEEEEecccccccCC--------------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChH
Confidence 34578999999998653 23699999999998 6899999999998877
Q ss_pred H--HHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCC
Q psy17244 110 A--AVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSP 160 (196)
Q Consensus 110 ~--~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~ 160 (196)
. ..++.++.....|..+++....... ....-++.++.+++++++|-|+.
T Consensus 55 ~~~~~L~~~gl~~~~~~~Ii~s~~~~~~--~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 55 SLHKTLKSLGINADLPEMIISSGEIAVQ--MILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred HHHHHHHHCCCCccccceEEccHHHHHH--HHHhhhhhccCCCceEEEeCCcc
Confidence 6 6778887762267777765533211 11122234455566777777755
No 85
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.49 E-value=0.00029 Score=55.53 Aligned_cols=113 Identities=11% Similarity=0.107 Sum_probs=71.3
Q ss_pred CCCeEEEEeCCCceeeeec-CCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244 30 VKRKVLVLDLDETLIHSHH-DGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI 107 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ 107 (196)
.+.+.+++|+||||+.... ... . +.. ...+.. |.+ .=++.+. +.++++|-|+....
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~-------~---~~~---------~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~ 76 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGN-------N---GEE---------LKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSK 76 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcC-------C---CCE---------EEEEec-cch--HHHHHHHHCCCEEEEEeCCCcH
Confidence 3678999999999997631 100 0 000 111111 322 2344444 68999999999999
Q ss_pred hHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccccCCCCceE
Q psy17244 108 YGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNAI 171 (196)
Q Consensus 108 ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~I 171 (196)
.+..+++.++.. .+|. .+......+.+-++.+|.++++++.|-|+..-.......|+
T Consensus 77 ~v~~~l~~lgl~-~~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~ 133 (183)
T PRK09484 77 LVEDRMTTLGIT-HLYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGL 133 (183)
T ss_pred HHHHHHHHcCCc-eeec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 999999999865 3543 11111224456677789999999999999865443333333
No 86
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.49 E-value=0.00028 Score=53.28 Aligned_cols=81 Identities=5% Similarity=-0.091 Sum_probs=65.2
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSI 153 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ 153 (196)
.....||+.++|+.|. +.+.++|.|++.+..+..+++.+ .. .+|..++..+++. .++ .+.+-++++|.++ ++
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~-~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~ 137 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LG-DYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EV 137 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HH-hcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CE
Confidence 3455699999999996 68999999999999999999985 33 4677777777665 332 5677788888888 99
Q ss_pred EEEECCCcc
Q psy17244 154 FILDNSPGA 162 (196)
Q Consensus 154 iiIDD~~~~ 162 (196)
++|.|++.-
T Consensus 138 l~iGDs~~D 146 (154)
T TIGR01549 138 LHVGDNLND 146 (154)
T ss_pred EEEeCCHHH
Confidence 999999753
No 87
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.43 E-value=0.00019 Score=56.33 Aligned_cols=94 Identities=12% Similarity=0.127 Sum_probs=67.1
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC-------------Ccccccc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG-------------SYTKDLS 144 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~-------------~~~KdL~ 144 (196)
+..+||+.++|+.+. +.+.++|.|++...+++.+++.++.. .+|...+..+......+ .+.+-++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD-YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC-eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 568999999999997 68999999999999999999999876 46665544322111110 1122245
Q ss_pred ccCCCCCcEEEEECCCccccCCCCceEee
Q psy17244 145 AISPDLSSIFILDNSPGAYRGFPDNAIPI 173 (196)
Q Consensus 145 ~l~~~~~~~iiIDD~~~~~~~~~~N~I~v 173 (196)
.++.+++++++|.|+..-.......|+.+
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 56888999999999986555444445533
No 88
>PTZ00445 p36-lilke protein; Provisional
Probab=97.38 E-value=0.00015 Score=58.41 Aligned_cols=136 Identities=17% Similarity=0.221 Sum_probs=85.4
Q ss_pred cCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc
Q psy17244 27 LSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM 105 (196)
Q Consensus 27 ~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~ 105 (196)
+...+-+.+++|||.|||..-.... ..+.. +...+.-..+|.+.+++..|. ..+.|+|-|-+.
T Consensus 38 L~~~GIk~Va~D~DnTlI~~HsgG~----~~~~~------------~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd 101 (219)
T PTZ00445 38 LNECGIKVIASDFDLTMITKHSGGY----IDPDN------------DDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSD 101 (219)
T ss_pred HHHcCCeEEEecchhhhhhhhcccc----cCCCc------------chhhhhccCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 4456889999999999986321110 11110 011234567999999999998 589999999888
Q ss_pred hhh---------------HHHHHHHhcCCCceeeEEE-E-----ecC-----CCCC---CCC--c--cccccccCCCCCc
Q psy17244 106 EIY---------------GAAVADKLDARRHILRRRY-Y-----RQH-----CTPE---LGS--Y--TKDLSAISPDLSS 152 (196)
Q Consensus 106 ~~y---------------a~~vl~~ldp~~~~f~~~l-~-----r~~-----c~~~---~~~--~--~KdL~~l~~~~~~ 152 (196)
+.- ++..++.-.-+-. +..++ | .+. +... .+. | .+-+++.|.++++
T Consensus 102 ~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~-i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE 180 (219)
T PTZ00445 102 KELIPSENRPRYISGDRMVEAALKKSKCDFK-IKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDE 180 (219)
T ss_pred hhhccccCCcceechHHHHHHHHHhcCccce-eeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHH
Confidence 743 4444443222211 11221 1 111 1111 112 3 4556677999999
Q ss_pred EEEEECCCccccCCCCceEeeceecCC
Q psy17244 153 IFILDNSPGAYRGFPDNAIPIKSWFSD 179 (196)
Q Consensus 153 ~iiIDD~~~~~~~~~~N~I~v~~f~~~ 179 (196)
+++|||++..+.....-|+...-|.+.
T Consensus 181 ~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 181 ILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred eEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 999999999988777788887777653
No 89
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.37 E-value=0.00023 Score=57.12 Aligned_cols=81 Identities=7% Similarity=0.128 Sum_probs=56.0
Q ss_pred EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCC--------CC--CCCccccccccCC
Q psy17244 79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCT--------PE--LGSYTKDLSAISP 148 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~--------~~--~~~~~KdL~~l~~ 148 (196)
+.++||+.+|++++.+...++|-|++...+++++++.++.. .+|...+--+... .. +....+-++..+
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~-~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~- 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFP-TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY- 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCc-hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC-
Confidence 57899999999999977899999999999999999999876 4666544332210 00 111222232222
Q ss_pred CCCcEEEEECCCccc
Q psy17244 149 DLSSIFILDNSPGAY 163 (196)
Q Consensus 149 ~~~~~iiIDD~~~~~ 163 (196)
.+++.|-|+..-.
T Consensus 145 --~~~v~vGDs~nDl 157 (203)
T TIGR02137 145 --YRVIAAGDSYNDT 157 (203)
T ss_pred --CCEEEEeCCHHHH
Confidence 3788998888643
No 90
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=97.36 E-value=4.8e-05 Score=58.78 Aligned_cols=77 Identities=6% Similarity=0.043 Sum_probs=65.1
Q ss_pred EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244 79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI 155 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii 155 (196)
+...||+.++|+. ++|.|+++..++..+++.++.. .+|+.+++.+.....++ .|.+-++++|.+++++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~-~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLP-WYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCH-HHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 5689999999993 7899999999999999999876 68888888876555443 678888999999999999
Q ss_pred EECCCcc
Q psy17244 156 LDNSPGA 162 (196)
Q Consensus 156 IDD~~~~ 162 (196)
|+|++.-
T Consensus 162 vgD~~~D 168 (175)
T TIGR01493 162 VAAHQWD 168 (175)
T ss_pred EecChhh
Confidence 9999743
No 91
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=97.28 E-value=0.00084 Score=56.18 Aligned_cols=96 Identities=17% Similarity=0.072 Sum_probs=56.2
Q ss_pred CCCeEEEEeCCCceeeeecCCCC-CCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGIT-RPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI 107 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ 107 (196)
.+++.+|||+|||+++.+..... .....+.+..++.-- ...--...-||+.+||+.+. +...+++.|+....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~w------v~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~ 146 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKW------VQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEK 146 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHH------HHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 46789999999999987632100 000001100001000 00012456799999999996 78999999998876
Q ss_pred hHHHHHH---HhcCCCceeeEEEEecC
Q psy17244 108 YGAAVAD---KLDARRHILRRRYYRQH 131 (196)
Q Consensus 108 ya~~vl~---~ldp~~~~f~~~l~r~~ 131 (196)
..+...+ .++.....+++++.++.
T Consensus 147 ~~~~T~~~Lkk~Gi~~~~~d~lllr~~ 173 (266)
T TIGR01533 147 EKAATLKNLKRFGFPQADEEHLLLKKD 173 (266)
T ss_pred hHHHHHHHHHHcCcCCCCcceEEeCCC
Confidence 6664444 44443223457777753
No 92
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.26 E-value=0.00023 Score=63.82 Aligned_cols=93 Identities=10% Similarity=0.114 Sum_probs=72.8
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC--CCCCccccccccCCCCCcEEE
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP--ELGSYTKDLSAISPDLSSIFI 155 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~--~~~~~~KdL~~l~~~~~~~ii 155 (196)
+.+.||+.++|++|. +.+.++|.|++...++..+++.++-. .+|..+++.+.... ....+.+-++.+ +++++++
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~-~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD-QWVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH-hhcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence 567899999999997 68999999999999999999999886 58988888776532 222445555555 4689999
Q ss_pred EECCCccccCCCCceEeec
Q psy17244 156 LDNSPGAYRGFPDNAIPIK 174 (196)
Q Consensus 156 IDD~~~~~~~~~~N~I~v~ 174 (196)
|.|++.-.......|+.+.
T Consensus 406 VGDs~~Di~aAk~AG~~~I 424 (459)
T PRK06698 406 VGDRLSDINAAKDNGLIAI 424 (459)
T ss_pred EeCCHHHHHHHHHCCCeEE
Confidence 9999987666666666543
No 93
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.23 E-value=0.00025 Score=63.16 Aligned_cols=134 Identities=19% Similarity=0.153 Sum_probs=80.9
Q ss_pred CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI 107 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ 107 (196)
...+++||||||+||+--..-.. .--.++..-...+..+ =-+++|+..+. +++=++|.|.....
T Consensus 219 g~~kK~LVLDLDNTLWGGVIGed----------Gv~GI~Ls~~~~G~~f-----k~fQ~~Ik~l~kqGVlLav~SKN~~~ 283 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGVIGED----------GVDGIRLSNSAEGEAF-----KTFQNFIKGLKKQGVLLAVCSKNTEK 283 (574)
T ss_pred CcccceEEEecCCcccccccccc----------cccceeecCCCCchhH-----HHHHHHHHHHHhccEEEEEecCCchh
Confidence 45889999999999987653110 0011111100000000 12567777776 78999999999999
Q ss_pred hHHHHHHHhcCCCceeeEE-EEecCCCCCC--CCccccccccCCCCCcEEEEECCCccccCCCCce-EeeceecCC
Q psy17244 108 YGAAVADKLDARRHILRRR-YYRQHCTPEL--GSYTKDLSAISPDLSSIFILDNSPGAYRGFPDNA-IPIKSWFSD 179 (196)
Q Consensus 108 ya~~vl~~ldp~~~~f~~~-l~r~~c~~~~--~~~~KdL~~l~~~~~~~iiIDD~~~~~~~~~~N~-I~v~~f~~~ 179 (196)
-|+.+..+- |+ .+++-- +..-.|.... ....|..++|+-..+..++|||+|.-...-..++ +.|.+|-.+
T Consensus 284 da~evF~kh-p~-MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~D 357 (574)
T COG3882 284 DAKEVFRKH-PD-MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPED 357 (574)
T ss_pred hHHHHHhhC-CC-eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCCC
Confidence 998887653 32 222111 1122333332 2557888999999999999999997654333222 666666544
No 94
>KOG2914|consensus
Probab=97.23 E-value=0.00043 Score=56.41 Aligned_cols=100 Identities=8% Similarity=0.028 Sum_probs=73.8
Q ss_pred EEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE--ecCCCCC---CCCccccccccCCC
Q psy17244 76 RFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYY--RQHCTPE---LGSYTKDLSAISPD 149 (196)
Q Consensus 76 ~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~--r~~c~~~---~~~~~KdL~~l~~~ 149 (196)
.-.++.-||+..++..|. ..-.+.+||++.+..++..++.+.-.-..|++... -+.+... ...|.+-++++|.+
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~ 167 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVP 167 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCC
Confidence 345788899999999998 68999999999999888888877632245666554 2233222 23688999999998
Q ss_pred C-CcEEEEECCCccccCCC---CceEeece
Q psy17244 150 L-SSIFILDNSPGAYRGFP---DNAIPIKS 175 (196)
Q Consensus 150 ~-~~~iiIDD~~~~~~~~~---~N~I~v~~ 175 (196)
+ +.+++++|++.-..... -+.|.++.
T Consensus 168 ~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 168 PPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred CccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 8 99999999998665444 34444444
No 95
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.20 E-value=0.00081 Score=51.96 Aligned_cols=107 Identities=23% Similarity=0.343 Sum_probs=59.7
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc---h--
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM---E-- 106 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~---~-- 106 (196)
|.+.||+||||+....... -+....|+ ...-|++.+-|+++. +.|.|+|.|+-. .
T Consensus 1 Kia~fD~DgTLi~~~s~~~-----f~~~~~D~--------------~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~ 61 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK-----FPKDPDDW--------------KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGM 61 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT-----S-SSTCGG--------------EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTB
T ss_pred CEEEEeCCCCccCCCCCCc-----CcCCHHHh--------------hhcchhHHHHHHHHHhcCCeEEEEeCcccccccc
Confidence 4688999999999875321 11223333 556789999999998 699999999862 1
Q ss_pred ---------hhHHHHHHHhcCCCceeeEEEEe---cCCCCC-CCCccccccccC----CCCCcEEEEECCCcc
Q psy17244 107 ---------IYGAAVADKLDARRHILRRRYYR---QHCTPE-LGSYTKDLSAIS----PDLSSIFILDNSPGA 162 (196)
Q Consensus 107 ---------~ya~~vl~~ldp~~~~f~~~l~r---~~c~~~-~~~~~KdL~~l~----~~~~~~iiIDD~~~~ 162 (196)
...+.+++.++.. + .++.. +.|... .|++..-++.++ .+.++.++|=|+..-
T Consensus 62 ~~~~~~~~~~ki~~il~~l~ip---~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 62 GEKDLENFHEKIENILKELGIP---I-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp TCCHHHHHHHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ccchHHHHHHHHHHHHHHcCCc---e-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCC
Confidence 2334455555432 2 22221 223322 234433344443 488899999987654
No 96
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.07 E-value=0.0014 Score=46.75 Aligned_cols=50 Identities=24% Similarity=0.244 Sum_probs=38.1
Q ss_pred EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244 35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA 113 (196)
Q Consensus 35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl 113 (196)
++||+||||++.. ..=||+.+|++.|. +...+++.|+++..-...++
T Consensus 1 ~l~D~dGvl~~g~--------------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~ 48 (101)
T PF13344_consen 1 FLFDLDGVLYNGN--------------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYA 48 (101)
T ss_dssp EEEESTTTSEETT--------------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHH
T ss_pred CEEeCccEeEeCC--------------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHH
Confidence 5799999999743 23599999999998 57999999999866656665
Q ss_pred HHh
Q psy17244 114 DKL 116 (196)
Q Consensus 114 ~~l 116 (196)
+.|
T Consensus 49 ~~L 51 (101)
T PF13344_consen 49 KKL 51 (101)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
No 97
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.07 E-value=0.0014 Score=52.94 Aligned_cols=84 Identities=10% Similarity=0.165 Sum_probs=62.8
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecC-----------CCCCC-CCc-ccccc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQH-----------CTPEL-GSY-TKDLS 144 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~-----------c~~~~-~~~-~KdL~ 144 (196)
..++||+.+.++.+. ..+.++|.|+|...+++++.+.++.+ ..++..+-.+. |.... ..- ..-++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d-~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGID-YVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCc-hheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 889999999999998 67999999999999999999999987 45666665554 21110 011 12234
Q ss_pred ccCCCCCcEEEEECCCccc
Q psy17244 145 AISPDLSSIFILDNSPGAY 163 (196)
Q Consensus 145 ~l~~~~~~~iiIDD~~~~~ 163 (196)
.+|.++++++.+=|+..-.
T Consensus 155 ~~g~~~~~~~a~gDs~nDl 173 (212)
T COG0560 155 ELGIPLEETVAYGDSANDL 173 (212)
T ss_pred HcCCCHHHeEEEcCchhhH
Confidence 4578889999999988644
No 98
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=97.04 E-value=0.0021 Score=50.15 Aligned_cols=105 Identities=18% Similarity=0.240 Sum_probs=68.9
Q ss_pred CCcccccc--cCCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCc
Q psy17244 19 LSPLSRHR--LSIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWY 96 (196)
Q Consensus 19 ~~p~~~~~--~~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~y 96 (196)
+.-++-.. +...+-+.||||+|+||+.-.. -..-|.+.+.+++|.+.|
T Consensus 26 i~~I~~~~~~Lk~~Gik~li~DkDNTL~~~~~------------------------------~~i~~~~~~~~~~l~~~~ 75 (168)
T PF09419_consen 26 IRDIDFEANHLKKKGIKALIFDKDNTLTPPYE------------------------------DEIPPEYAEWLNELKKQF 75 (168)
T ss_pred hhhCCcchhhhhhcCceEEEEcCCCCCCCCCc------------------------------CcCCHHHHHHHHHHHHHC
Confidence 33344444 6677999999999999975432 234678889999998654
Q ss_pred -e--EEEEcCCc-------hhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccC-----CCCCcEEEEECCCc
Q psy17244 97 -E--LVVFTASM-------EIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAIS-----PDLSSIFILDNSPG 161 (196)
Q Consensus 97 -e--i~I~T~~~-------~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~-----~~~~~~iiIDD~~~ 161 (196)
. |+|.|++. ..-|+.+-+.++.. .+.+. +.. .+.+.+-++.++ ..++++++|-|...
T Consensus 76 ~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~h~-----~kK-P~~~~~i~~~~~~~~~~~~p~eiavIGDrl~ 147 (168)
T PF09419_consen 76 GKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLRHR-----AKK-PGCFREILKYFKCQKVVTSPSEIAVIGDRLF 147 (168)
T ss_pred CCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEEeC-----CCC-CccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence 3 99999984 66677788888743 33222 221 122223333332 35899999999863
No 99
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=96.92 E-value=0.0016 Score=50.83 Aligned_cols=106 Identities=8% Similarity=0.020 Sum_probs=70.7
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhHH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYGA 110 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~ 110 (196)
.-+.+|||.||+|-+-...-. ..+ .....+..|-|.--.+-. .+.+.++|.|+....+++
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~------------------~~g-~~~~~~~~~D~~~~~~L~-~~Gi~laIiT~k~~~~~~ 65 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVIN------------------DEG-IESRNFDIKDGMGVIVLQ-LCGIDVAIITSKKSGAVR 65 (169)
T ss_pred cCeEEEEeCceeeECCeEEEc------------------CCC-cEEEEEecchHHHHHHHH-HCCCEEEEEECCCcHHHH
Confidence 467899999999987642100 000 112234555555432221 368999999999999999
Q ss_pred HHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccc
Q psy17244 111 AVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAY 163 (196)
Q Consensus 111 ~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~ 163 (196)
.+++.++.. .+|... ......+..-+++++.++++++.|-|+..-.
T Consensus 66 ~~l~~lgi~-~~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 66 HRAEELKIK-RFHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred HHHHHCCCc-EEEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 999999886 466431 1122245566677788999999999998643
No 100
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.91 E-value=0.0024 Score=53.18 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=47.6
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG 109 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya 109 (196)
..+.+++||||||+.+.. ...|...+.|+.+. +...++|-|..+...+
T Consensus 3 ~~kli~~DlDGTLl~~~~-------------------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~ 51 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHT-------------------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEV 51 (273)
T ss_pred cceEEEEcCcccCcCCCC-------------------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 357899999999997531 12467889999998 5799999999999999
Q ss_pred HHHHHHhcCC
Q psy17244 110 AAVADKLDAR 119 (196)
Q Consensus 110 ~~vl~~ldp~ 119 (196)
..+++.++..
T Consensus 52 ~~~~~~l~l~ 61 (273)
T PRK00192 52 EVLRKELGLE 61 (273)
T ss_pred HHHHHHcCCC
Confidence 9999998754
No 101
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=96.86 E-value=0.00082 Score=54.93 Aligned_cols=90 Identities=8% Similarity=0.013 Sum_probs=66.3
Q ss_pred EeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC---CccccccccCCCCCcEEE
Q psy17244 79 VHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---SYTKDLSAISPDLSSIFI 155 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---~~~KdL~~l~~~~~~~ii 155 (196)
+..-||+.++|+.|++.+.++|-|++... ++..+.. .+|+.++..+.....++ .|.+-++++|.+++++++
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 45669999999999988999999998765 2455554 68888887765544333 567778889999999999
Q ss_pred EECCC-ccccCCCCceEeec
Q psy17244 156 LDNSP-GAYRGFPDNAIPIK 174 (196)
Q Consensus 156 IDD~~-~~~~~~~~N~I~v~ 174 (196)
|-|++ .-......+|+...
T Consensus 186 VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred EcCCcHHHHHHHHHCCCeEE
Confidence 99985 54444445555443
No 102
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=96.81 E-value=0.0035 Score=51.70 Aligned_cols=59 Identities=22% Similarity=0.198 Sum_probs=51.0
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG 109 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya 109 (196)
..+.+++||||||+.+.. ...|...+.|+.+. +...++|.|..+...+
T Consensus 2 ~~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~ 50 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNK-------------------------------TISPETKEALARLREKGVKVVLATGRPLPDV 50 (264)
T ss_pred CeeEEEEcCCCCccCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHH
Confidence 357899999999998863 15788899999885 8999999999999999
Q ss_pred HHHHHHhcCCC
Q psy17244 110 AAVADKLDARR 120 (196)
Q Consensus 110 ~~vl~~ldp~~ 120 (196)
.++++.|+...
T Consensus 51 ~~~~~~l~~~~ 61 (264)
T COG0561 51 LSILEELGLDG 61 (264)
T ss_pred HHHHHHcCCCc
Confidence 99999998763
No 103
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.66 E-value=0.0046 Score=49.45 Aligned_cols=56 Identities=14% Similarity=0.133 Sum_probs=46.1
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA 111 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~ 111 (196)
+.+++||||||+... -..-|...+-|+++. +...++|-|..+...+..
T Consensus 2 k~v~~DlDGTLl~~~-------------------------------~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~ 50 (215)
T TIGR01487 2 KLVAIDIDGTLTEPN-------------------------------RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARA 50 (215)
T ss_pred cEEEEecCCCcCCCC-------------------------------cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHH
Confidence 478999999999642 124567788889987 679999999999999999
Q ss_pred HHHHhcCC
Q psy17244 112 VADKLDAR 119 (196)
Q Consensus 112 vl~~ldp~ 119 (196)
+++.++..
T Consensus 51 ~~~~l~~~ 58 (215)
T TIGR01487 51 LAVLIGTS 58 (215)
T ss_pred HHHHhCCC
Confidence 99998775
No 104
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.53 E-value=0.0031 Score=50.47 Aligned_cols=54 Identities=22% Similarity=0.164 Sum_probs=45.1
Q ss_pred EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244 35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA 113 (196)
Q Consensus 35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl 113 (196)
|++||||||+++.. ..-|...+.|+++. ++..+++.|.-+...+..++
T Consensus 1 i~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~ 49 (254)
T PF08282_consen 1 IFSDLDGTLLNSDG-------------------------------KISPETIEALKELQEKGIKLVIATGRSYSSIKRLL 49 (254)
T ss_dssp EEEECCTTTCSTTS-------------------------------SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHH
T ss_pred cEEEECCceecCCC-------------------------------eeCHHHHHHHHhhcccceEEEEEccCccccccccc
Confidence 68999999998542 13477888999887 89999999999999999999
Q ss_pred HHhcCC
Q psy17244 114 DKLDAR 119 (196)
Q Consensus 114 ~~ldp~ 119 (196)
..+.-.
T Consensus 50 ~~~~~~ 55 (254)
T PF08282_consen 50 KELGID 55 (254)
T ss_dssp HHTTHC
T ss_pred ccccch
Confidence 987654
No 105
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.50 E-value=0.0091 Score=50.26 Aligned_cols=104 Identities=17% Similarity=0.231 Sum_probs=67.9
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcC---CCceeeEEEEecCCCCC---CC----Cccc-----
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDA---RRHILRRRYYRQHCTPE---LG----SYTK----- 141 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp---~~~~f~~~l~r~~c~~~---~~----~~~K----- 141 (196)
.+.+|||+.+|++.|. ....++|+|+|...+++.+++.++. ...+++.++--+..+.. .+ .+.|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 5889999999999997 6799999999999999999998654 22454555433211111 11 1122
Q ss_pred --cccccC--CCCCcEEEEECCCcccc-----CCCCceEeeceecCCCCC
Q psy17244 142 --DLSAIS--PDLSSIFILDNSPGAYR-----GFPDNAIPIKSWFSDPSD 182 (196)
Q Consensus 142 --dL~~l~--~~~~~~iiIDD~~~~~~-----~~~~N~I~v~~f~~~~~D 182 (196)
..+.++ .++++||+|-|+..-.. .+.+|.|.| .|-.+.-+
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e 247 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVD 247 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHH
Confidence 222345 68899999999997442 233566655 44443333
No 106
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=96.50 E-value=0.0082 Score=48.25 Aligned_cols=57 Identities=12% Similarity=0.138 Sum_probs=44.9
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA 110 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~ 110 (196)
.+.+++||||||+.+.. ...|...+-|.++. +...++|-|.-+...+.
T Consensus 3 ~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~ 51 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR-------------------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFAR 51 (230)
T ss_pred eeEEEEecCCCcCCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHH
Confidence 36899999999996531 23566777888887 57899999999988888
Q ss_pred HHHHHhcCC
Q psy17244 111 AVADKLDAR 119 (196)
Q Consensus 111 ~vl~~ldp~ 119 (196)
++++.++..
T Consensus 52 ~~~~~l~~~ 60 (230)
T PRK01158 52 AAAKLIGTS 60 (230)
T ss_pred HHHHHhCCC
Confidence 888888765
No 107
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.45 E-value=0.0067 Score=50.45 Aligned_cols=59 Identities=15% Similarity=0.170 Sum_probs=45.8
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY 108 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y 108 (196)
..++.+++||||||+++... .-|-..+-|+++. ++..++|.|.-+...
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~-------------------------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~ 53 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTY-------------------------------DWQPAAPWLTRLREAQVPVILCSSKTAAE 53 (271)
T ss_pred CCCeEEEEeCccCCcCCCCc-------------------------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHH
Confidence 46778999999999975310 1234567788887 679999999999999
Q ss_pred HHHHHHHhcCC
Q psy17244 109 GAAVADKLDAR 119 (196)
Q Consensus 109 a~~vl~~ldp~ 119 (196)
+..+++.++..
T Consensus 54 i~~~~~~l~~~ 64 (271)
T PRK03669 54 MLPLQQTLGLQ 64 (271)
T ss_pred HHHHHHHhCCC
Confidence 99999998753
No 108
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=96.38 E-value=0.0073 Score=49.56 Aligned_cols=55 Identities=20% Similarity=0.230 Sum_probs=42.7
Q ss_pred EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHH
Q psy17244 34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAV 112 (196)
Q Consensus 34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~v 112 (196)
.+++||||||++... ...|...+.|+++. ++..++|-|..+...+..+
T Consensus 1 li~~DlDGTLl~~~~-------------------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~ 49 (256)
T TIGR00099 1 LIFIDLDGTLLNDDH-------------------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNI 49 (256)
T ss_pred CEEEeCCCCCCCCCC-------------------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH
Confidence 378999999997531 13456677888887 5789999999998888888
Q ss_pred HHHhcCC
Q psy17244 113 ADKLDAR 119 (196)
Q Consensus 113 l~~ldp~ 119 (196)
++.++..
T Consensus 50 ~~~~~~~ 56 (256)
T TIGR00099 50 LKELGLD 56 (256)
T ss_pred HHHcCCC
Confidence 8887654
No 109
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=96.38 E-value=0.0054 Score=49.19 Aligned_cols=87 Identities=8% Similarity=0.085 Sum_probs=58.4
Q ss_pred EEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCceeeEEE--EecCCCCCCC---C----------ccc
Q psy17244 78 FVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRHILRRRY--YRQHCTPELG---S----------YTK 141 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l--~r~~c~~~~~---~----------~~K 141 (196)
.+.+|||+.+||+.+.+ ...++|.|++...+++.+++.+.....++.... ..+.....+. . -.+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 47899999999999984 799999999999999999999854433443221 1111000000 0 012
Q ss_pred cccccCCCCCcEEEEECCCcccc
Q psy17244 142 DLSAISPDLSSIFILDNSPGAYR 164 (196)
Q Consensus 142 dL~~l~~~~~~~iiIDD~~~~~~ 164 (196)
-++.++...++++.|-|+..-..
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~ 170 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVE 170 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHH
Confidence 34444556788999999987554
No 110
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=96.38 E-value=0.011 Score=48.71 Aligned_cols=57 Identities=21% Similarity=0.232 Sum_probs=35.7
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA 110 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~ 110 (196)
.+.+++||||||+.+... .-|...+-|+++. ++..++|-|.-....+.
T Consensus 3 ~kli~~DlDGTLl~~~~~-------------------------------i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~ 51 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKT-------------------------------ILPESLEALARAREAGYKVIIVTGRHHVAIH 51 (272)
T ss_pred ccEEEEeCCCceECCCCc-------------------------------cCHHHHHHHHHHHHCCCEEEEEcCCChHHHH
Confidence 468999999999976421 1233445555555 45666666666666666
Q ss_pred HHHHHhcCC
Q psy17244 111 AVADKLDAR 119 (196)
Q Consensus 111 ~vl~~ldp~ 119 (196)
.+++.++..
T Consensus 52 ~~~~~l~~~ 60 (272)
T PRK10530 52 PFYQALALD 60 (272)
T ss_pred HHHHhcCCC
Confidence 666666543
No 111
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.38 E-value=0.012 Score=48.46 Aligned_cols=52 Identities=8% Similarity=0.252 Sum_probs=43.6
Q ss_pred EEeeCccHHHHHHHhh---hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEec
Q psy17244 78 FVHKRPHVDFFLDIVS---QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQ 130 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~---~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~ 130 (196)
.+..-||..+|++.++ ..++++|-|.|..-|.+.|++.-+.. ..|+.+++..
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~-~~f~~I~TNp 123 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR-DCFSEIFTNP 123 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc-cccceEEeCC
Confidence 4788999999999994 48999999999999999999998876 4666555443
No 112
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=96.37 E-value=0.0075 Score=49.77 Aligned_cols=57 Identities=19% Similarity=0.192 Sum_probs=44.9
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA 110 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~ 110 (196)
.+.+++||||||+++.. ..-|...+-|+++. ++..++|-|.-+...+.
T Consensus 3 ~kli~~DlDGTLl~~~~-------------------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~ 51 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-------------------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVH 51 (270)
T ss_pred eEEEEEecCCcCcCCCC-------------------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHH
Confidence 46899999999997641 12355667888887 67999999999999999
Q ss_pred HHHHHhcCC
Q psy17244 111 AVADKLDAR 119 (196)
Q Consensus 111 ~vl~~ldp~ 119 (196)
.+++.++..
T Consensus 52 ~~~~~l~~~ 60 (270)
T PRK10513 52 RYLKELHME 60 (270)
T ss_pred HHHHHhCCC
Confidence 999888753
No 113
>PRK10444 UMP phosphatase; Provisional
Probab=96.35 E-value=0.0088 Score=49.44 Aligned_cols=53 Identities=25% Similarity=0.360 Sum_probs=43.9
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA 111 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~ 111 (196)
+.+++|+||||++.. ..=||+.++++.|. +...+++-|+++..-...
T Consensus 2 ~~v~~DlDGtL~~~~--------------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~ 49 (248)
T PRK10444 2 KNVICDIDGVLMHDN--------------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQD 49 (248)
T ss_pred cEEEEeCCCceEeCC--------------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHH
Confidence 478999999999874 12489999999998 689999999999887777
Q ss_pred HHHHhc
Q psy17244 112 VADKLD 117 (196)
Q Consensus 112 vl~~ld 117 (196)
+++.|.
T Consensus 50 ~~~~l~ 55 (248)
T PRK10444 50 LANRFA 55 (248)
T ss_pred HHHHHH
Confidence 777764
No 114
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=96.30 E-value=0.017 Score=45.61 Aligned_cols=111 Identities=23% Similarity=0.243 Sum_probs=74.5
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc----
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM---- 105 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~---- 105 (196)
..+.|+||.||||+--... +.- ..+ -..+.||+.+-|..+. ..|.++|+|+-+
T Consensus 4 ~~k~lflDRDGtin~d~~~--------------yv~--~~~------~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~r 61 (181)
T COG0241 4 DQKALFLDRDGTINIDKGD--------------YVD--SLD------DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGR 61 (181)
T ss_pred CCcEEEEcCCCceecCCCc--------------ccC--cHH------HhccCccHHHHHHHHHhCCCeEEEEECCCCccc
Confidence 3679999999999855421 000 000 1567899999999996 689999999943
Q ss_pred h--------hhHHHHHHHhcCCCceeeEEEEecC-----CCCCC---CCccccccccCCCCCcEEEEECCCccc
Q psy17244 106 E--------IYGAAVADKLDARRHILRRRYYRQH-----CTPEL---GSYTKDLSAISPDLSSIFILDNSPGAY 163 (196)
Q Consensus 106 ~--------~ya~~vl~~ldp~~~~f~~~l~r~~-----c~~~~---~~~~KdL~~l~~~~~~~iiIDD~~~~~ 163 (196)
. .+-+.++..|--.+.-|+.++++.| |...+ +++..-++..+.++++.++|=|+..-.
T Consensus 62 gyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dl 135 (181)
T COG0241 62 GYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDL 135 (181)
T ss_pred cCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHH
Confidence 1 2222344455444456788887653 44433 355666777788999999999996533
No 115
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.29 E-value=0.0066 Score=48.65 Aligned_cols=54 Identities=19% Similarity=0.169 Sum_probs=43.1
Q ss_pred EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244 35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA 113 (196)
Q Consensus 35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl 113 (196)
+++||||||+++... . -|-..+.|+.+. +...++|.|..+...+..++
T Consensus 2 i~~DlDGTLL~~~~~------------------------------~-~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~ 50 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY------------------------------D-WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQ 50 (221)
T ss_pred EEEeCCCCCcCCCCC------------------------------C-cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 789999999976410 1 122678899887 57999999999999999999
Q ss_pred HHhcCC
Q psy17244 114 DKLDAR 119 (196)
Q Consensus 114 ~~ldp~ 119 (196)
+.++..
T Consensus 51 ~~l~~~ 56 (221)
T TIGR02463 51 KALGLT 56 (221)
T ss_pred HHcCCC
Confidence 998753
No 116
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.24 E-value=0.011 Score=48.06 Aligned_cols=54 Identities=17% Similarity=0.154 Sum_probs=43.2
Q ss_pred EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHH
Q psy17244 34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAV 112 (196)
Q Consensus 34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~v 112 (196)
.+++||||||++... + -|...++|+++. +...+++.|.-+..-+..+
T Consensus 1 li~~DlDGTLl~~~~------------------------------~--~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~ 48 (225)
T TIGR02461 1 VIFTDLDGTLLPPGY------------------------------E--PGPAREALEELKDLGFPIVFVSSKTRAEQEYY 48 (225)
T ss_pred CEEEeCCCCCcCCCC------------------------------C--chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 378999999998321 1 245789999998 5799999999999988889
Q ss_pred HHHhcCC
Q psy17244 113 ADKLDAR 119 (196)
Q Consensus 113 l~~ldp~ 119 (196)
++.++..
T Consensus 49 ~~~lg~~ 55 (225)
T TIGR02461 49 REELGVE 55 (225)
T ss_pred HHHcCCC
Confidence 9888753
No 117
>PLN02645 phosphoglycolate phosphatase
Probab=96.23 E-value=0.009 Score=50.92 Aligned_cols=54 Identities=19% Similarity=0.181 Sum_probs=42.9
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG 109 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya 109 (196)
+-+.++||+||||++... + =||+.++|+.|. +...+++-|+.+..-.
T Consensus 27 ~~~~~~~D~DGtl~~~~~------------------------------~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~ 74 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDK------------------------------L--IEGVPETLDMLRSMGKKLVFVTNNSTKSR 74 (311)
T ss_pred hCCEEEEeCcCCeEeCCc------------------------------c--CcCHHHHHHHHHHCCCEEEEEeCCCCCCH
Confidence 456899999999987531 2 289999999997 7899999999986666
Q ss_pred HHHHHHh
Q psy17244 110 AAVADKL 116 (196)
Q Consensus 110 ~~vl~~l 116 (196)
..+++.|
T Consensus 75 ~~~~~~l 81 (311)
T PLN02645 75 AQYGKKF 81 (311)
T ss_pred HHHHHHH
Confidence 6666554
No 118
>PRK10976 putative hydrolase; Provisional
Probab=96.20 E-value=0.012 Score=48.40 Aligned_cols=56 Identities=23% Similarity=0.342 Sum_probs=38.4
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA 111 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~ 111 (196)
+.+++||||||+++.. ..-|...+-|+.+. ++..++|-|.-+...+..
T Consensus 3 kli~~DlDGTLl~~~~-------------------------------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~ 51 (266)
T PRK10976 3 QVVASDLDGTLLSPDH-------------------------------TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQ 51 (266)
T ss_pred eEEEEeCCCCCcCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHH
Confidence 6899999999997642 12344456666665 567777777777777777
Q ss_pred HHHHhcCC
Q psy17244 112 VADKLDAR 119 (196)
Q Consensus 112 vl~~ldp~ 119 (196)
+++.++..
T Consensus 52 ~~~~l~~~ 59 (266)
T PRK10976 52 IRDNLEIK 59 (266)
T ss_pred HHHhcCCC
Confidence 77776554
No 119
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.19 E-value=0.012 Score=48.76 Aligned_cols=56 Identities=18% Similarity=0.154 Sum_probs=39.9
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA 111 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~ 111 (196)
+.+++||||||+.+.. ..-|...+-|+++. ++..+++-|.-+...+..
T Consensus 3 kli~~DlDGTLl~~~~-------------------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~ 51 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-------------------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQH 51 (272)
T ss_pred cEEEEeCCCcCcCCCC-------------------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence 6899999999997531 12344566677776 567777777777777777
Q ss_pred HHHHhcCC
Q psy17244 112 VADKLDAR 119 (196)
Q Consensus 112 vl~~ldp~ 119 (196)
+++.++..
T Consensus 52 ~~~~l~~~ 59 (272)
T PRK15126 52 ILGALSLD 59 (272)
T ss_pred HHHHcCCC
Confidence 77777654
No 120
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.11 E-value=0.012 Score=45.36 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=42.7
Q ss_pred EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH--
Q psy17244 34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA-- 110 (196)
Q Consensus 34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~-- 110 (196)
.+++|+||||+.+....... +. +.. . ...|++.++++.+. +.+.+++.|+.....+.
T Consensus 1 iVisDIDGTL~~sd~~~~~~----~~----------~~~----~--~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t 60 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVV----PI----------IGK----D--WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRT 60 (157)
T ss_pred CEEEecCCCCcccccccccc----cc----------ccc----C--cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHH
Confidence 37899999999875221100 00 000 1 33799999999998 68999999888877664
Q ss_pred -HHHHHh
Q psy17244 111 -AVADKL 116 (196)
Q Consensus 111 -~vl~~l 116 (196)
..++.+
T Consensus 61 ~~~l~~~ 67 (157)
T smart00775 61 RSYLSQI 67 (157)
T ss_pred HHHHHHh
Confidence 566653
No 121
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.08 E-value=0.017 Score=48.97 Aligned_cols=57 Identities=12% Similarity=0.156 Sum_probs=45.1
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA 110 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~ 110 (196)
++.+++||||||+++... + -+-..+-|+.|. +...+++.|+-+..-+.
T Consensus 1 ~KLIftDLDGTLLd~~~~-----------------------------~--~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~ 49 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFN-----------------------------S--YGAARQALAALERRSIPLVLYSLRTRAQLE 49 (302)
T ss_pred CcEEEEeCCCCCcCCCCc-----------------------------C--CHHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence 367899999999986421 1 234677888887 67999999999999888
Q ss_pred HHHHHhcCC
Q psy17244 111 AVADKLDAR 119 (196)
Q Consensus 111 ~vl~~ldp~ 119 (196)
.+.+.+...
T Consensus 50 ~l~~~Lgl~ 58 (302)
T PRK12702 50 HLCRQLRLE 58 (302)
T ss_pred HHHHHhCCC
Confidence 999988765
No 122
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.97 E-value=0.015 Score=48.25 Aligned_cols=56 Identities=14% Similarity=0.103 Sum_probs=39.9
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA 111 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~ 111 (196)
+.++||+||||++..... -..=|+..++++.+. +...+++.|+.+..-...
T Consensus 2 k~i~~D~DGtl~~~~~~~----------------------------~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~ 53 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS----------------------------GVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQD 53 (257)
T ss_pred CEEEEeCCCeEEeCCCcc----------------------------cCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHH
Confidence 478999999999774210 013589999999998 679999999876654333
Q ss_pred HHHHh
Q psy17244 112 VADKL 116 (196)
Q Consensus 112 vl~~l 116 (196)
+.+.+
T Consensus 54 ~~~~l 58 (257)
T TIGR01458 54 LLERL 58 (257)
T ss_pred HHHHH
Confidence 33333
No 123
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=95.77 E-value=0.023 Score=45.34 Aligned_cols=53 Identities=15% Similarity=0.132 Sum_probs=40.0
Q ss_pred EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244 35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA 113 (196)
Q Consensus 35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl 113 (196)
+++||||||+++.. ...|-..+-|+.+. +...+++-|.-+...+..++
T Consensus 1 i~~DlDGTLl~~~~-------------------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~ 49 (225)
T TIGR01482 1 IASDIDGTLTDPNR-------------------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALA 49 (225)
T ss_pred CeEeccCccCCCCc-------------------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH
Confidence 57999999997641 12345566777776 56889999988888888888
Q ss_pred HHhcC
Q psy17244 114 DKLDA 118 (196)
Q Consensus 114 ~~ldp 118 (196)
+.++.
T Consensus 50 ~~l~~ 54 (225)
T TIGR01482 50 KLIGT 54 (225)
T ss_pred HHhCC
Confidence 88873
No 124
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=95.70 E-value=0.025 Score=47.17 Aligned_cols=61 Identities=16% Similarity=0.057 Sum_probs=44.0
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh--CceEEEEcCCchhh
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ--WYELVVFTASMEIY 108 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~T~~~~~y 108 (196)
.+..+++|+||||+.....+. . ...-|.+.+-|+.|++ ...++|-|.-+..-
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~--------~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~ 66 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPD--------Q------------------VVVPDNILQGLQLLATANDGALALISGRSMVE 66 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcc--------c------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHH
Confidence 467899999999997643211 0 2334778888888874 57888888888888
Q ss_pred HHHHHHHhc
Q psy17244 109 GAAVADKLD 117 (196)
Q Consensus 109 a~~vl~~ld 117 (196)
+..+++.++
T Consensus 67 ~~~~~~~~~ 75 (266)
T PRK10187 67 LDALAKPYR 75 (266)
T ss_pred HHHhcCccc
Confidence 877776553
No 125
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.65 E-value=0.019 Score=45.31 Aligned_cols=54 Identities=20% Similarity=0.199 Sum_probs=43.1
Q ss_pred EEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHH
Q psy17244 34 VLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAV 112 (196)
Q Consensus 34 ~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~v 112 (196)
.+++|+||||+.... ....|.+.+.|++|.+ ...++|-|..+...+..+
T Consensus 1 li~~D~DgTL~~~~~------------------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~ 50 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA------------------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKEL 50 (204)
T ss_pred CEEEeCcCCCcCCCC------------------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH
Confidence 378999999997421 1235788899999984 589999999999999999
Q ss_pred HHHhc
Q psy17244 113 ADKLD 117 (196)
Q Consensus 113 l~~ld 117 (196)
++.++
T Consensus 51 ~~~~~ 55 (204)
T TIGR01484 51 LKQLP 55 (204)
T ss_pred HHhCC
Confidence 98753
No 126
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.64 E-value=0.029 Score=46.89 Aligned_cols=43 Identities=16% Similarity=0.136 Sum_probs=34.5
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI 107 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ 107 (196)
+.+++|+||||++.. ..-||+.++|+++. +...+++-|+++..
T Consensus 3 ~~~~~D~DGtl~~~~--------------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns~~ 46 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE--------------------------------RVVPGAPELLDRLARAGKAALFVTNNSTK 46 (279)
T ss_pred cEEEEeCCCceEcCC--------------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 478999999998753 12478999999998 57899999986644
No 127
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=95.64 E-value=0.027 Score=46.31 Aligned_cols=54 Identities=17% Similarity=0.133 Sum_probs=43.0
Q ss_pred EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244 35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA 113 (196)
Q Consensus 35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl 113 (196)
+++||||||+++... .-+...+.++.+. +...+++-|.-+...+..++
T Consensus 2 i~~DlDGTll~~~~~-------------------------------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~ 50 (256)
T TIGR01486 2 IFTDLDGTLLDPHGY-------------------------------DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLR 50 (256)
T ss_pred EEEcCCCCCcCCCCc-------------------------------CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 789999999976420 1234688999998 57999999999999999999
Q ss_pred HHhcCC
Q psy17244 114 DKLDAR 119 (196)
Q Consensus 114 ~~ldp~ 119 (196)
+.++..
T Consensus 51 ~~~~~~ 56 (256)
T TIGR01486 51 KELGLE 56 (256)
T ss_pred HHcCCC
Confidence 988743
No 128
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=95.51 E-value=0.035 Score=42.50 Aligned_cols=50 Identities=18% Similarity=0.312 Sum_probs=42.4
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYY 128 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~ 128 (196)
.+..+||+.++++.+. +.+.++|.|++...+++.+++.++.. .+++..+.
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~-~~~~~~~~ 121 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID-DVFANRLE 121 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc-hheeeeEE
Confidence 3567999999999997 67999999999999999999998776 46665544
No 129
>PTZ00174 phosphomannomutase; Provisional
Probab=95.47 E-value=0.027 Score=46.27 Aligned_cols=53 Identities=17% Similarity=0.142 Sum_probs=36.8
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG 109 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya 109 (196)
..+.+++||||||+++.. ..-|...+-|+.+. ++..++|-|.-+..-+
T Consensus 4 ~~klia~DlDGTLL~~~~-------------------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i 52 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN-------------------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKI 52 (247)
T ss_pred CCeEEEEECcCCCcCCCC-------------------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 457899999999997752 12355667777776 5688888888766545
Q ss_pred HHHHH
Q psy17244 110 AAVAD 114 (196)
Q Consensus 110 ~~vl~ 114 (196)
...+.
T Consensus 53 ~~~l~ 57 (247)
T PTZ00174 53 KEQLG 57 (247)
T ss_pred HHHHh
Confidence 44443
No 130
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=95.47 E-value=0.022 Score=48.83 Aligned_cols=53 Identities=11% Similarity=0.102 Sum_probs=40.5
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-----CceEEEEcCCc--
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-----WYELVVFTASM-- 105 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-----~yei~I~T~~~-- 105 (196)
+.++||+||||+++.. .-|++.++++.+.. ...+.+.|++.
T Consensus 1 ~~~ifD~DGvL~~g~~--------------------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~ 48 (321)
T TIGR01456 1 FGFAFDIDGVLFRGKK--------------------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGF 48 (321)
T ss_pred CEEEEeCcCceECCcc--------------------------------ccHHHHHHHHHHhccccccCCCEEEEecCCCC
Confidence 3689999999998752 16899999999985 88999999885
Q ss_pred --hhhHHHHHHHhc
Q psy17244 106 --EIYGAAVADKLD 117 (196)
Q Consensus 106 --~~ya~~vl~~ld 117 (196)
+.+++.+.+.++
T Consensus 49 s~~~~~~~l~~~lG 62 (321)
T TIGR01456 49 SERARAEEISSLLG 62 (321)
T ss_pred CHHHHHHHHHHHcC
Confidence 445665545443
No 131
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=95.37 E-value=0.036 Score=45.65 Aligned_cols=50 Identities=20% Similarity=0.292 Sum_probs=36.1
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHH
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAA 111 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~ 111 (196)
+.+++|+||||+.... .=|+..++|+++. +...+++-|+++.+-...
T Consensus 2 ~~~~~D~DGtl~~~~~--------------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~ 49 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE--------------------------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPES 49 (249)
T ss_pred CEEEEeCCCceEcCCe--------------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHH
Confidence 3789999999997631 1268899999998 679999999755333333
Q ss_pred HHH
Q psy17244 112 VAD 114 (196)
Q Consensus 112 vl~ 114 (196)
+..
T Consensus 50 ~~~ 52 (249)
T TIGR01457 50 VAE 52 (249)
T ss_pred HHH
Confidence 333
No 132
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=95.00 E-value=0.043 Score=43.08 Aligned_cols=85 Identities=16% Similarity=0.163 Sum_probs=58.3
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEe-cC-----------CCCCCC--Cccccc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYR-QH-----------CTPELG--SYTKDL 143 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r-~~-----------c~~~~~--~~~KdL 143 (196)
...+|++.++++.+. +.+.++|-|++...+++.+++.++.. .+|...+.. ++ |..... ....-+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~-~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID-NAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc-ceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 457999999999997 57999999999999999999999876 466553322 11 110000 011112
Q ss_pred cccCCCCCcEEEEECCCcccc
Q psy17244 144 SAISPDLSSIFILDNSPGAYR 164 (196)
Q Consensus 144 ~~l~~~~~~~iiIDD~~~~~~ 164 (196)
+..+.++++++.+-|++.-..
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~~ 185 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDLP 185 (202)
T ss_pred HHcCCCHHHcEeeeCCcccHH
Confidence 334667788899999887543
No 133
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=94.89 E-value=0.051 Score=45.59 Aligned_cols=55 Identities=20% Similarity=0.203 Sum_probs=43.9
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG 109 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya 109 (196)
+..++++||||||++-. ..=||+.+||++|. +.-.+++-||++.+-.
T Consensus 7 ~y~~~l~DlDGvl~~G~--------------------------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~ 54 (269)
T COG0647 7 KYDGFLFDLDGVLYRGN--------------------------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSR 54 (269)
T ss_pred hcCEEEEcCcCceEeCC--------------------------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCH
Confidence 45578999999999664 22499999999998 5699999999987766
Q ss_pred HHHHHHhc
Q psy17244 110 AAVADKLD 117 (196)
Q Consensus 110 ~~vl~~ld 117 (196)
+.+.++|.
T Consensus 55 ~~~~~~L~ 62 (269)
T COG0647 55 EVVAARLS 62 (269)
T ss_pred HHHHHHHH
Confidence 66666554
No 134
>KOG3120|consensus
Probab=94.89 E-value=0.04 Score=44.86 Aligned_cols=56 Identities=7% Similarity=0.269 Sum_probs=45.0
Q ss_pred EeeCccHHHHHHHhhh--CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCC
Q psy17244 79 VHKRPHVDFFLDIVSQ--WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPE 135 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~--~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~ 135 (196)
+..-||+-+.++.+++ .||++|-|-+..-+.+.++++.+.. .+|+.+++...|...
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~-d~F~~IfTNPa~~da 140 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH-DLFSEIFTNPACVDA 140 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH-HHHHHHhcCCcccCC
Confidence 6678999999999984 4899999999999999999998875 566665555544443
No 135
>PLN02887 hydrolase family protein
Probab=94.86 E-value=0.049 Score=50.46 Aligned_cols=58 Identities=17% Similarity=0.096 Sum_probs=44.8
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY 108 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y 108 (196)
.+.+.+++||||||+++.. ..-|...+-|+.+. ++..++|.|.-...-
T Consensus 306 ~~iKLIa~DLDGTLLn~d~-------------------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~ 354 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKS-------------------------------QISETNAKALKEALSRGVKVVIATGKARPA 354 (580)
T ss_pred cCccEEEEeCCCCCCCCCC-------------------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHH
Confidence 4668999999999997632 12344567777776 689999999998888
Q ss_pred HHHHHHHhcC
Q psy17244 109 GAAVADKLDA 118 (196)
Q Consensus 109 a~~vl~~ldp 118 (196)
+..+++.++.
T Consensus 355 i~~~l~~L~l 364 (580)
T PLN02887 355 VIDILKMVDL 364 (580)
T ss_pred HHHHHHHhCc
Confidence 8888888764
No 136
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=94.77 E-value=0.056 Score=44.29 Aligned_cols=60 Identities=20% Similarity=0.089 Sum_probs=41.5
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-CceEEEEcCCchhhHH
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGA 110 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~ 110 (196)
|..|+.||||||+++.... -...|.+.+.++.+.+ .-.+++-|.-+..-+.
T Consensus 1 ~~li~tDlDGTLl~~~~~~----------------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~ 52 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGD----------------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYK 52 (249)
T ss_pred CeEEEEcCCCcCcCCCCCC----------------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHH
Confidence 4578899999999753110 2335778888888774 4477777777777777
Q ss_pred HHHHHhcCC
Q psy17244 111 AVADKLDAR 119 (196)
Q Consensus 111 ~vl~~ldp~ 119 (196)
.+++.+.+.
T Consensus 53 ~~~~~~~~~ 61 (249)
T TIGR01485 53 ELQKQKPLL 61 (249)
T ss_pred HHHhcCCCC
Confidence 787766543
No 137
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.28 E-value=0.11 Score=42.61 Aligned_cols=96 Identities=14% Similarity=0.038 Sum_probs=54.8
Q ss_pred CCCCeEEEEeCCCceeeeecCCCCC-CCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGITR-PTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME 106 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~ 106 (196)
..+|..+|||+|+|+++...-.... ....+.....+.--+ ..---..-|++.+|++.+. ++++|++.|.-+.
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv------~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e 147 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWL------GKGAAPALPEGLKLYQKIIELGIKIFLLSGRWE 147 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHH------HcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCh
Confidence 3588999999999999886411000 000000000000000 0001356799999999996 7899999999988
Q ss_pred hhHHHHHHHhcCCCc-eeeEEEEec
Q psy17244 107 IYGAAVADKLDARRH-ILRRRYYRQ 130 (196)
Q Consensus 107 ~ya~~vl~~ldp~~~-~f~~~l~r~ 130 (196)
.......+.|...+- -..+.+-|.
T Consensus 148 ~~r~~T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 148 ELRNATLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHHHHHHHcCCCCcCeeeecC
Confidence 775555555533310 124556664
No 138
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=94.26 E-value=0.064 Score=43.78 Aligned_cols=48 Identities=19% Similarity=0.277 Sum_probs=35.8
Q ss_pred EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh----hH
Q psy17244 35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI----YG 109 (196)
Q Consensus 35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~----ya 109 (196)
++||+||||++... .=|++.+++..+. +.+.+.+-|+++.+ ++
T Consensus 1 ~lfD~DGvL~~~~~--------------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~ 48 (236)
T TIGR01460 1 FLFDIDGVLWLGHK--------------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYA 48 (236)
T ss_pred CEEeCcCccCcCCc--------------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHH
Confidence 47999999998752 1368999999997 56999999977643 44
Q ss_pred HHHHH
Q psy17244 110 AAVAD 114 (196)
Q Consensus 110 ~~vl~ 114 (196)
+.+.+
T Consensus 49 ~~l~~ 53 (236)
T TIGR01460 49 EKLSS 53 (236)
T ss_pred HHHHH
Confidence 44444
No 139
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=94.21 E-value=0.13 Score=48.49 Aligned_cols=59 Identities=19% Similarity=0.112 Sum_probs=45.1
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhh
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIY 108 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~y 108 (196)
..++.+++||||||+++... +. +...+-|+.+. +...+++.|.-+...
T Consensus 414 ~~~KLIfsDLDGTLLd~d~~-----------------------------i~--~~t~eAL~~L~ekGI~~VIATGRs~~~ 462 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPLTY-----------------------------SY--STALDALRLLKDKELPLVFCSAKTMGE 462 (694)
T ss_pred ceeeEEEEECcCCCcCCCCc-----------------------------cC--HHHHHHHHHHHHcCCeEEEEeCCCHHH
Confidence 46677888999999986421 11 23456777787 679999999999999
Q ss_pred HHHHHHHhcCC
Q psy17244 109 GAAVADKLDAR 119 (196)
Q Consensus 109 a~~vl~~ldp~ 119 (196)
+..+++.++..
T Consensus 463 i~~l~~~Lgl~ 473 (694)
T PRK14502 463 QDLYRNELGIK 473 (694)
T ss_pred HHHHHHHcCCC
Confidence 99999988753
No 140
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=94.16 E-value=0.11 Score=43.08 Aligned_cols=101 Identities=10% Similarity=0.093 Sum_probs=65.8
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEE-----------EecCCCC-----------
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRY-----------YRQHCTP----------- 134 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l-----------~r~~c~~----------- 134 (196)
....=|.+.++++.++ +...++..|+..+.+...-++.|-.-+--|+... +...+..
T Consensus 79 ~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 79 MELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred eEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe
Confidence 4566789999999998 7899999999999998888777632211111111 1111111
Q ss_pred ---CCC-CccccccccCCCCCcEEEEECCCcccc----CCCCceEeeceecC
Q psy17244 135 ---ELG-SYTKDLSAISPDLSSIFILDNSPGAYR----GFPDNAIPIKSWFS 178 (196)
Q Consensus 135 ---~~~-~~~KdL~~l~~~~~~~iiIDD~~~~~~----~~~~N~I~v~~f~~ 178 (196)
++| ....=|..+|..++.+|+|||+..... .....+|..-.|..
T Consensus 159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 112 223456777999999999999997442 23346776666664
No 141
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=94.03 E-value=0.11 Score=40.75 Aligned_cols=81 Identities=14% Similarity=0.170 Sum_probs=61.0
Q ss_pred EEEEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHhcCCCc-eeeEEEEecCCCCCCCCccccccccCCCCCcE
Q psy17244 76 RFFVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKLDARRH-ILRRRYYRQHCTPELGSYTKDLSAISPDLSSI 153 (196)
Q Consensus 76 ~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~ldp~~~-~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~ 153 (196)
...-..||++.++|++|.+ .+.++|.|......|..+.+.++.... +|.... +......+.+-++.++.+++.|
T Consensus 123 ~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~----~kP~~k~~~~~i~~l~~~~~~v 198 (215)
T PF00702_consen 123 GLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI----GKPEPKIFLRIIKELQVKPGEV 198 (215)
T ss_dssp EEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE----TTTHHHHHHHHHHHHTCTGGGE
T ss_pred eecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc----ccccchhHHHHHHHHhcCCCEE
Confidence 4456789999999999985 699999999999999999999987421 232211 2222224456777788788899
Q ss_pred EEEECCC
Q psy17244 154 FILDNSP 160 (196)
Q Consensus 154 iiIDD~~ 160 (196)
++|=|..
T Consensus 199 ~~vGDg~ 205 (215)
T PF00702_consen 199 AMVGDGV 205 (215)
T ss_dssp EEEESSG
T ss_pred EEEccCH
Confidence 9999876
No 142
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=93.97 E-value=0.17 Score=40.16 Aligned_cols=41 Identities=10% Similarity=0.252 Sum_probs=37.7
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR 119 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~ 119 (196)
++.+||.++|.+++. +...++|-|+|+..|..++++.+..+
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgk 113 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGK 113 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccc
Confidence 789999999999998 67999999999999999999998643
No 143
>PLN02423 phosphomannomutase
Probab=93.80 E-value=0.12 Score=42.43 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=30.2
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCc
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASM 105 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~ 105 (196)
+..+++||||||+++.. ..-|...+.++++.+...+++.|..+
T Consensus 7 ~~i~~~D~DGTLl~~~~-------------------------------~i~~~~~~ai~~l~~~i~fviaTGR~ 49 (245)
T PLN02423 7 GVIALFDVDGTLTAPRK-------------------------------EATPEMLEFMKELRKVVTVGVVGGSD 49 (245)
T ss_pred ceEEEEeccCCCcCCCC-------------------------------cCCHHHHHHHHHHHhCCEEEEECCcC
Confidence 34555999999997642 12466678888888667777777653
No 144
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=93.57 E-value=0.2 Score=46.21 Aligned_cols=84 Identities=12% Similarity=0.172 Sum_probs=58.7
Q ss_pred EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC-CCCCccccccccCCCCCcEE
Q psy17244 77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP-ELGSYTKDLSAISPDLSSIF 154 (196)
Q Consensus 77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~-~~~~~~KdL~~l~~~~~~~i 154 (196)
+.-..||++.+++++|. ..++++|-|+..+.+++.+++.++.+ ++. .+.. ++... ++.+....++++
T Consensus 402 ~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~------~~~p~~K~~~---v~~l~~~~~~v~ 470 (562)
T TIGR01511 402 LEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRA------EVLPDDKAAL---IKELQEKGRVVA 470 (562)
T ss_pred ecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEc------cCChHHHHHH---HHHHHHcCCEEE
Confidence 34678999999999998 57999999999999999999999874 332 1211 12122 233334568899
Q ss_pred EEECCCccccCCCCceE
Q psy17244 155 ILDNSPGAYRGFPDNAI 171 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I 171 (196)
+|-|...-...-...++
T Consensus 471 ~VGDg~nD~~al~~A~v 487 (562)
T TIGR01511 471 MVGDGINDAPALAQADV 487 (562)
T ss_pred EEeCCCccHHHHhhCCE
Confidence 99999875543333334
No 145
>KOG3085|consensus
Probab=93.37 E-value=0.053 Score=44.63 Aligned_cols=95 Identities=9% Similarity=-0.050 Sum_probs=70.0
Q ss_pred EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCC---CCCccccccccCCCCCc
Q psy17244 77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPE---LGSYTKDLSAISPDLSS 152 (196)
Q Consensus 77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~---~~~~~KdL~~l~~~~~~ 152 (196)
.+....|-+ ++|+.+. +.+.|.|.|+...++= .++..++.. .+|++++..-..+.. ...|.+-|++++..|+.
T Consensus 111 ~~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee 187 (237)
T KOG3085|consen 111 AWKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEE 187 (237)
T ss_pred CceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHH
Confidence 344555555 9999998 7899999999998876 777777776 688887643223333 34788999999999999
Q ss_pred EEEEECCCcc-ccCCC---CceEeec
Q psy17244 153 IFILDNSPGA-YRGFP---DNAIPIK 174 (196)
Q Consensus 153 ~iiIDD~~~~-~~~~~---~N~I~v~ 174 (196)
+|.|||+... +.... -++|.|.
T Consensus 188 ~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 188 CVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred eEEecCccccccHhHHHcCCEEEEEc
Confidence 9999999987 54333 3455544
No 146
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=93.28 E-value=0.042 Score=43.25 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=13.4
Q ss_pred EEEEeCCCceeeeec
Q psy17244 34 VLVLDLDETLIHSHH 48 (196)
Q Consensus 34 ~LVLDLD~TLv~s~~ 48 (196)
.+|||+||||++|..
T Consensus 2 ~viFD~DGTLiDs~~ 16 (197)
T TIGR01548 2 ALVLDMDGVMADVSQ 16 (197)
T ss_pred ceEEecCceEEechH
Confidence 589999999999974
No 147
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=93.27 E-value=0.16 Score=42.49 Aligned_cols=60 Identities=12% Similarity=0.026 Sum_probs=47.8
Q ss_pred CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCce--EEEEcCCch
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYE--LVVFTASME 106 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~ye--i~I~T~~~~ 106 (196)
..++.+++||.||||......+. -...=+++.+.|..|+..+. ++|.|--+.
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~--------------------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~ 68 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPE--------------------------AAVPDDRLLSLLQDLASDPRNVVAIISGRSL 68 (266)
T ss_pred cccceEEEEeccccccccccCcc--------------------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCH
Confidence 45788999999999998875431 14556788999999998877 888888888
Q ss_pred hhHHHHHH
Q psy17244 107 IYGAAVAD 114 (196)
Q Consensus 107 ~ya~~vl~ 114 (196)
.-.+..+.
T Consensus 69 ~~l~~~~~ 76 (266)
T COG1877 69 AELERLFG 76 (266)
T ss_pred HHHHHhcC
Confidence 88888777
No 148
>PLN02151 trehalose-phosphatase
Probab=93.27 E-value=0.16 Score=44.24 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=45.3
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhH
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYG 109 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya 109 (196)
.++..|+||+||||+--...+ . .+..-|.+.+-|+.|++.+.++|-|--...-+
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~P--------~------------------~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l 149 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDDP--------D------------------RAFMSKKMRNTVRKLAKCFPTAIVSGRCREKV 149 (354)
T ss_pred CCceEEEEecCccCCCCCCCc--------c------------------cccCCHHHHHHHHHHhcCCCEEEEECCCHHHH
Confidence 366789999999999544221 1 14567889999999998889999998888877
Q ss_pred HHHHH
Q psy17244 110 AAVAD 114 (196)
Q Consensus 110 ~~vl~ 114 (196)
+.++.
T Consensus 150 ~~~~~ 154 (354)
T PLN02151 150 SSFVK 154 (354)
T ss_pred HHHcC
Confidence 77765
No 149
>PLN02580 trehalose-phosphatase
Probab=92.85 E-value=0.21 Score=44.03 Aligned_cols=61 Identities=15% Similarity=0.074 Sum_probs=48.7
Q ss_pred CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhh
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIY 108 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~y 108 (196)
..++..|+||.||||.--...+ . -+..-|++.+-|+.|++.+.++|-|--...-
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~P--------d------------------~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~ 169 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDP--------D------------------RALMSDAMRSAVKNVAKYFPTAIISGRSRDK 169 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCc--------c------------------cccCCHHHHHHHHHHhhCCCEEEEeCCCHHH
Confidence 3467789999999998654321 1 1566789999999999989999999999888
Q ss_pred HHHHHHH
Q psy17244 109 GAAVADK 115 (196)
Q Consensus 109 a~~vl~~ 115 (196)
++.++..
T Consensus 170 L~~~l~~ 176 (384)
T PLN02580 170 VYELVGL 176 (384)
T ss_pred HHHHhCC
Confidence 8888764
No 150
>PLN03017 trehalose-phosphatase
Probab=92.65 E-value=0.24 Score=43.34 Aligned_cols=60 Identities=15% Similarity=0.036 Sum_probs=44.4
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCCchhhH
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTASMEIYG 109 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya 109 (196)
.++..|+||+||||+--...+. ....-|.+.+-|++|++.+.++|-|--+..-+
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~--------------------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l 162 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPD--------------------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKV 162 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcc--------------------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHH
Confidence 3677889999999994432110 02445788889999998899999998888888
Q ss_pred HHHHHH
Q psy17244 110 AAVADK 115 (196)
Q Consensus 110 ~~vl~~ 115 (196)
..+++.
T Consensus 163 ~~~~~l 168 (366)
T PLN03017 163 YNFVKL 168 (366)
T ss_pred HHhhcc
Confidence 877543
No 151
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.38 E-value=0.13 Score=42.11 Aligned_cols=17 Identities=24% Similarity=0.436 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeeee
Q psy17244 31 KRKVLVLDLDETLIHSH 47 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~ 47 (196)
++..|+||+||||+...
T Consensus 2 ~~~~l~lD~DGTL~~~~ 18 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIV 18 (244)
T ss_pred CcEEEEEecCccccCCc
Confidence 56789999999999654
No 152
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=92.30 E-value=0.91 Score=39.46 Aligned_cols=53 Identities=19% Similarity=0.192 Sum_probs=44.7
Q ss_pred EEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHh-c-----C-CCceeeEEEE
Q psy17244 76 RFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKL-D-----A-RRHILRRRYY 128 (196)
Q Consensus 76 ~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~l-d-----p-~~~~f~~~l~ 128 (196)
.-|+.+-||+.++|+.+. +...+.|-|++...|++.+++.+ + + ...+|+.++.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 447888999999999997 67999999999999999999997 5 2 3468876653
No 153
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.13 E-value=0.088 Score=41.41 Aligned_cols=16 Identities=25% Similarity=0.355 Sum_probs=13.7
Q ss_pred eEEEEeCCCceeeeec
Q psy17244 33 KVLVLDLDETLIHSHH 48 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~ 48 (196)
+.|+|||||||+++..
T Consensus 1 k~viFDlDGTL~d~~~ 16 (203)
T TIGR02252 1 KLITFDAVGTLLALKE 16 (203)
T ss_pred CeEEEecCCceeeeCC
Confidence 3789999999999853
No 154
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=92.00 E-value=0.19 Score=41.07 Aligned_cols=82 Identities=17% Similarity=0.082 Sum_probs=46.3
Q ss_pred CCCeEEEEeCCCceeeeecCCC-CCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGI-TRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI 107 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ 107 (196)
.+++.+|||+|||+++...... ........+..++.--+ ..+ . -..=||+.+|++.+. .+++|++-|.-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv-~~~--~---~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWV-ASG--K---APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHH-HCT--G---GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHH-hcc--c---CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 5788999999999996543100 00000000000000000 000 0 133488999999998 68999999988777
Q ss_pred hHHHHHHHhc
Q psy17244 108 YGAAVADKLD 117 (196)
Q Consensus 108 ya~~vl~~ld 117 (196)
.-+.-++.|.
T Consensus 144 ~r~~T~~nL~ 153 (229)
T PF03767_consen 144 QREATEKNLK 153 (229)
T ss_dssp CHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 6555555554
No 155
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=91.96 E-value=0.074 Score=41.26 Aligned_cols=14 Identities=43% Similarity=0.558 Sum_probs=12.7
Q ss_pred EEEEeCCCceeeee
Q psy17244 34 VLVLDLDETLIHSH 47 (196)
Q Consensus 34 ~LVLDLD~TLv~s~ 47 (196)
.++|||||||+++.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 58999999999985
No 156
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=91.80 E-value=0.15 Score=42.02 Aligned_cols=79 Identities=19% Similarity=0.124 Sum_probs=46.8
Q ss_pred CCCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEE-----EEeeCccHHHHHHHhh-hCceEEEE
Q psy17244 28 SIVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRF-----FVHKRPHVDFFLDIVS-QWYELVVF 101 (196)
Q Consensus 28 ~~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----~v~~RP~l~eFL~~l~-~~yei~I~ 101 (196)
...+++.+|+|||||.++-+.-.... -.....|.- ..+.. --+.=||+.|||+++- ++-.|.--
T Consensus 75 ~k~K~~aVvlDlDETvLdNs~Yqgy~----v~nnk~f~p------e~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyi 144 (274)
T COG2503 75 KKGKKKAVVLDLDETVLDNSAYQGYQ----VLNNKGFTP------ETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYI 144 (274)
T ss_pred ccCCCceEEEecchHhhcCccccchh----hhcCCCCCc------cchHHHHhhcccccCccHHHHHHHHHhcCcEEEEE
Confidence 34567799999999999987533211 000111100 00111 1345699999999997 56677666
Q ss_pred cCCchhh-HHHHHHHh
Q psy17244 102 TASMEIY-GAAVADKL 116 (196)
Q Consensus 102 T~~~~~y-a~~vl~~l 116 (196)
|+-..+. ...-++.|
T Consensus 145 SNR~~~~~~~~T~~nL 160 (274)
T COG2503 145 SNRDQENEKDGTIENL 160 (274)
T ss_pred eccchhcccchhHHHH
Confidence 7766666 55555544
No 157
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=91.77 E-value=0.09 Score=43.52 Aligned_cols=16 Identities=13% Similarity=0.200 Sum_probs=14.1
Q ss_pred CeEEEEeCCCceeeee
Q psy17244 32 RKVLVLDLDETLIHSH 47 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~ 47 (196)
-++++||+||||+++.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 4689999999999984
No 158
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=91.67 E-value=0.08 Score=40.78 Aligned_cols=16 Identities=19% Similarity=0.574 Sum_probs=14.2
Q ss_pred eEEEEeCCCceeeeec
Q psy17244 33 KVLVLDLDETLIHSHH 48 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~ 48 (196)
+.++||+||||+++..
T Consensus 2 ~~iiFD~DGTL~ds~~ 17 (185)
T TIGR02009 2 KAVIFDMDGVIVDTAP 17 (185)
T ss_pred CeEEEcCCCcccCChH
Confidence 5799999999999964
No 159
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=91.58 E-value=0.11 Score=42.58 Aligned_cols=15 Identities=13% Similarity=0.259 Sum_probs=13.5
Q ss_pred eEEEEeCCCceeeee
Q psy17244 33 KVLVLDLDETLIHSH 47 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~ 47 (196)
++++||+||||+++.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 589999999999984
No 160
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=91.54 E-value=0.094 Score=41.70 Aligned_cols=16 Identities=44% Similarity=0.731 Sum_probs=14.1
Q ss_pred eEEEEeCCCceeeeec
Q psy17244 33 KVLVLDLDETLIHSHH 48 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~ 48 (196)
+.++||+||||+++..
T Consensus 3 ~~viFDlDGTL~ds~~ 18 (221)
T TIGR02253 3 KAIFFDLDDTLIDTSG 18 (221)
T ss_pred eEEEEeCCCCCcCCCC
Confidence 5799999999999864
No 161
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=91.45 E-value=0.087 Score=43.23 Aligned_cols=17 Identities=29% Similarity=0.440 Sum_probs=14.7
Q ss_pred CeEEEEeCCCceeeeec
Q psy17244 32 RKVLVLDLDETLIHSHH 48 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~ 48 (196)
-+.++||+||||++|..
T Consensus 22 ~k~viFDlDGTLiDs~~ 38 (248)
T PLN02770 22 LEAVLFDVDGTLCDSDP 38 (248)
T ss_pred cCEEEEcCCCccCcCHH
Confidence 36899999999999964
No 162
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=91.43 E-value=0.1 Score=42.20 Aligned_cols=18 Identities=28% Similarity=0.433 Sum_probs=15.2
Q ss_pred CCCeEEEEeCCCceeeee
Q psy17244 30 VKRKVLVLDLDETLIHSH 47 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~ 47 (196)
++.+.+||||||||+++.
T Consensus 8 ~~~k~vIFDlDGTL~d~~ 25 (224)
T PRK14988 8 QDVDTVLLDMDGTLLDLA 25 (224)
T ss_pred ccCCEEEEcCCCCccchh
Confidence 356789999999999964
No 163
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=91.18 E-value=0.11 Score=42.43 Aligned_cols=16 Identities=38% Similarity=0.576 Sum_probs=14.0
Q ss_pred CeEEEEeCCCceeeee
Q psy17244 32 RKVLVLDLDETLIHSH 47 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~ 47 (196)
-+.++|||||||+++.
T Consensus 10 ~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 10 ISALTFDLDDTLYDNR 25 (238)
T ss_pred ceeEEEcCcccccCCh
Confidence 3689999999999985
No 164
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=91.07 E-value=0.13 Score=43.37 Aligned_cols=17 Identities=24% Similarity=0.444 Sum_probs=15.2
Q ss_pred CCeEEEEeCCCceeeee
Q psy17244 31 KRKVLVLDLDETLIHSH 47 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~ 47 (196)
+-+.+|||+||||+++.
T Consensus 39 ~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 39 LPEALLFDCDGVLVETE 55 (286)
T ss_pred CCcEEEEeCceeEEccc
Confidence 44689999999999998
No 165
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=91.02 E-value=0.85 Score=34.75 Aligned_cols=85 Identities=16% Similarity=0.325 Sum_probs=52.2
Q ss_pred EeeCccHHHHHHHhhhCceEEEEcCCchhh--HHHHHHHhcCCCcee--eEEEEecCCCCCCCCccccccccCCCCCcEE
Q psy17244 79 VHKRPHVDFFLDIVSQWYELVVFTASMEIY--GAAVADKLDARRHIL--RRRYYRQHCTPELGSYTKDLSAISPDLSSIF 154 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~yei~I~T~~~~~y--a~~vl~~ldp~~~~f--~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~i 154 (196)
...-||+++-+++|.+.|+++|.|+++..+ ...-.+.|--.-.++ +++++ |+. |.+= +-=+
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vf---Cgn------Kniv------kaDi 131 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVF---CGN------KNIV------KADI 131 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEE---ecC------CCeE------EeeE
Confidence 456799999999999999999999995433 222222221100001 12222 332 2221 2337
Q ss_pred EEECCCccccCCCCceEeeceecC
Q psy17244 155 ILDNSPGAYRGFPDNAIPIKSWFS 178 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I~v~~f~~ 178 (196)
+|||.|.......+|-|.-..-..
T Consensus 132 lIDDnp~nLE~F~G~kIlFdA~HN 155 (180)
T COG4502 132 LIDDNPLNLENFKGNKILFDAHHN 155 (180)
T ss_pred EecCCchhhhhccCceEEEecccc
Confidence 999999988888888777655544
No 166
>PRK11590 hypothetical protein; Provisional
Probab=90.99 E-value=0.14 Score=41.03 Aligned_cols=39 Identities=18% Similarity=-0.028 Sum_probs=35.0
Q ss_pred EeeCccHHHHH-HHhh-hCceEEEEcCCchhhHHHHHHHhc
Q psy17244 79 VHKRPHVDFFL-DIVS-QWYELVVFTASMEIYGAAVADKLD 117 (196)
Q Consensus 79 v~~RP~l~eFL-~~l~-~~yei~I~T~~~~~ya~~vl~~ld 117 (196)
+..+||+.+.| +.+. +.+.++|-|++...+++++++.+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45699999999 5677 689999999999999999999877
No 167
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=90.80 E-value=0.45 Score=43.83 Aligned_cols=86 Identities=10% Similarity=0.099 Sum_probs=61.6
Q ss_pred EEEeeCccHHHHHHHhh-hC-ceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEE
Q psy17244 77 FFVHKRPHVDFFLDIVS-QW-YELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIF 154 (196)
Q Consensus 77 ~~v~~RP~l~eFL~~l~-~~-yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~i 154 (196)
.....|||+.+.|++|. +. ++++|-|+..+.+++.+++.++.. .+|... ...++ .+-++.++...++++
T Consensus 381 ~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~-~~f~~~-----~p~~K---~~~v~~l~~~~~~v~ 451 (556)
T TIGR01525 381 LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID-EVHAEL-----LPEDK---LAIVKELQEEGGVVA 451 (556)
T ss_pred ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-eeeccC-----CHHHH---HHHHHHHHHcCCEEE
Confidence 34678999999999997 57 999999999999999999999986 455432 11112 123444444667999
Q ss_pred EEECCCccccCCCCceE
Q psy17244 155 ILDNSPGAYRGFPDNAI 171 (196)
Q Consensus 155 iIDD~~~~~~~~~~N~I 171 (196)
+|-|...-...-...++
T Consensus 452 ~vGDg~nD~~al~~A~v 468 (556)
T TIGR01525 452 MVGDGINDAPALAAADV 468 (556)
T ss_pred EEECChhHHHHHhhCCE
Confidence 99999875543333334
No 168
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=90.59 E-value=0.088 Score=41.57 Aligned_cols=14 Identities=43% Similarity=0.681 Sum_probs=12.3
Q ss_pred EEEeCCCceeeeec
Q psy17244 35 LVLDLDETLIHSHH 48 (196)
Q Consensus 35 LVLDLD~TLv~s~~ 48 (196)
+||||||||++|..
T Consensus 1 iiFDlDGTL~Ds~~ 14 (205)
T TIGR01454 1 VVFDLDGVLVDSFA 14 (205)
T ss_pred CeecCcCccccCHH
Confidence 58999999999964
No 169
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=90.54 E-value=0.42 Score=45.48 Aligned_cols=62 Identities=16% Similarity=0.145 Sum_probs=45.7
Q ss_pred CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh--CceEEEEcCCch
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ--WYELVVFTASME 106 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~T~~~~ 106 (196)
..++..+++|+||||+.....+ . ....-|.+.+.|+.|++ ...++|-|.-+.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~--------~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~ 542 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDP--------E------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDR 542 (726)
T ss_pred hccceEEEEecCccccCCCCCc--------c------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence 3467899999999999653211 0 02335788889999986 788999999998
Q ss_pred hhHHHHHHHh
Q psy17244 107 IYGAAVADKL 116 (196)
Q Consensus 107 ~ya~~vl~~l 116 (196)
...+.++..+
T Consensus 543 ~~l~~~~~~~ 552 (726)
T PRK14501 543 DTLERWFGDL 552 (726)
T ss_pred HHHHHHhCCC
Confidence 8888777654
No 170
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=90.40 E-value=0.11 Score=38.91 Aligned_cols=14 Identities=36% Similarity=0.717 Sum_probs=12.6
Q ss_pred EEEEeCCCceeeee
Q psy17244 34 VLVLDLDETLIHSH 47 (196)
Q Consensus 34 ~LVLDLD~TLv~s~ 47 (196)
+++||+||||+++.
T Consensus 1 ~iifD~DGTL~d~~ 14 (154)
T TIGR01549 1 AILFDIDGTLVDSS 14 (154)
T ss_pred CeEecCCCcccccH
Confidence 47999999999995
No 171
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=89.88 E-value=0.11 Score=40.96 Aligned_cols=14 Identities=43% Similarity=0.679 Sum_probs=12.2
Q ss_pred EEEeCCCceeeeec
Q psy17244 35 LVLDLDETLIHSHH 48 (196)
Q Consensus 35 LVLDLD~TLv~s~~ 48 (196)
+|||+||||++|..
T Consensus 1 viFD~DGTL~Ds~~ 14 (213)
T TIGR01449 1 VLFDLDGTLVDSAP 14 (213)
T ss_pred CeecCCCccccCHH
Confidence 58999999999864
No 172
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=89.70 E-value=0.13 Score=39.51 Aligned_cols=15 Identities=20% Similarity=0.519 Sum_probs=13.1
Q ss_pred EEEEeCCCceeeeec
Q psy17244 34 VLVLDLDETLIHSHH 48 (196)
Q Consensus 34 ~LVLDLD~TLv~s~~ 48 (196)
.+|||+||||+++..
T Consensus 1 ~iiFD~DGTL~ds~~ 15 (185)
T TIGR01990 1 AVIFDLDGVITDTAE 15 (185)
T ss_pred CeEEcCCCccccChH
Confidence 379999999999974
No 173
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=89.65 E-value=0.15 Score=38.96 Aligned_cols=14 Identities=36% Similarity=0.589 Sum_probs=12.5
Q ss_pred EEEeCCCceeeeec
Q psy17244 35 LVLDLDETLIHSHH 48 (196)
Q Consensus 35 LVLDLD~TLv~s~~ 48 (196)
++||+||||+++..
T Consensus 2 viFD~DGTL~D~~~ 15 (175)
T TIGR01493 2 MVFDVYGTLVDVHG 15 (175)
T ss_pred eEEecCCcCcccHH
Confidence 79999999999863
No 174
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=89.53 E-value=0.17 Score=40.12 Aligned_cols=16 Identities=38% Similarity=0.692 Sum_probs=14.0
Q ss_pred eEEEEeCCCceeeeec
Q psy17244 33 KVLVLDLDETLIHSHH 48 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~ 48 (196)
+.++||+||||+++..
T Consensus 2 k~viFD~DGTL~d~~~ 17 (224)
T TIGR02254 2 KTLLFDLDDTILDFQA 17 (224)
T ss_pred CEEEEcCcCcccccch
Confidence 4799999999999864
No 175
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=89.47 E-value=0.16 Score=39.76 Aligned_cols=16 Identities=44% Similarity=0.590 Sum_probs=13.8
Q ss_pred eEEEEeCCCceeeeec
Q psy17244 33 KVLVLDLDETLIHSHH 48 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~ 48 (196)
+.++||+||||+++..
T Consensus 2 k~viFD~dgTLiD~~~ 17 (198)
T TIGR01428 2 KALVFDVYGTLFDVHS 17 (198)
T ss_pred cEEEEeCCCcCccHHH
Confidence 4799999999999863
No 176
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=89.36 E-value=0.21 Score=39.55 Aligned_cols=15 Identities=27% Similarity=0.512 Sum_probs=13.4
Q ss_pred eEEEEeCCCceeeee
Q psy17244 33 KVLVLDLDETLIHSH 47 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~ 47 (196)
+++||||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 489999999999974
No 177
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=89.03 E-value=0.21 Score=38.86 Aligned_cols=16 Identities=38% Similarity=0.565 Sum_probs=13.6
Q ss_pred CeEEEEeCCCceeeee
Q psy17244 32 RKVLVLDLDETLIHSH 47 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~ 47 (196)
.+++|||+||||+.+.
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 4589999999999853
No 178
>PLN02382 probable sucrose-phosphatase
Probab=89.01 E-value=0.86 Score=40.54 Aligned_cols=21 Identities=43% Similarity=0.564 Sum_probs=16.8
Q ss_pred ccCCCCCeEEEEeCCCceeee
Q psy17244 26 RLSIVKRKVLVLDLDETLIHS 46 (196)
Q Consensus 26 ~~~~~~k~~LVLDLD~TLv~s 46 (196)
++....+..|+.||||||+.+
T Consensus 3 ~~~~~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 3 RLSGSPRLMIVSDLDHTMVDH 23 (413)
T ss_pred cccCCCCEEEEEcCCCcCcCC
Confidence 344566889999999999976
No 179
>PRK09449 dUMP phosphatase; Provisional
Probab=88.64 E-value=0.2 Score=39.92 Aligned_cols=15 Identities=40% Similarity=0.561 Sum_probs=12.8
Q ss_pred CeEEEEeCCCceeee
Q psy17244 32 RKVLVLDLDETLIHS 46 (196)
Q Consensus 32 k~~LVLDLD~TLv~s 46 (196)
-++++|||||||++.
T Consensus 3 ~k~iiFDlDGTLid~ 17 (224)
T PRK09449 3 YDWILFDADETLFHF 17 (224)
T ss_pred ccEEEEcCCCchhcc
Confidence 358999999999974
No 180
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=88.38 E-value=0.22 Score=39.53 Aligned_cols=17 Identities=35% Similarity=0.565 Sum_probs=14.4
Q ss_pred CCeEEEEeCCCceeeee
Q psy17244 31 KRKVLVLDLDETLIHSH 47 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~ 47 (196)
.-+.++||+||||+++.
T Consensus 5 ~~~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 5 DIRAVAFDLDGTLVDSA 21 (226)
T ss_pred cCcEEEEcCCcccccCH
Confidence 34589999999999885
No 181
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=88.29 E-value=0.38 Score=40.45 Aligned_cols=93 Identities=6% Similarity=0.003 Sum_probs=52.6
Q ss_pred CCeEEEEeCCCceeeeecCCC-CCCCCCCCCCCCcE-EEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchh
Q psy17244 31 KRKVLVLDLDETLIHSHHDGI-TRPTVKPGTPPDFV-LKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEI 107 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~-~~~~~~~~~~~d~~-~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ 107 (196)
++-.+|||+|||+++...... .....++.....+. .-+. .---..=|++.+|.+.+. .++.|++.|.-...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~------~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVN------KGEAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHh------cccCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 678999999999996543110 00000000000010 0000 001334589999999997 78999999998876
Q ss_pred hHHHHHHHhcCCCce--eeEEEEec
Q psy17244 108 YGAAVADKLDARRHI--LRRRYYRQ 130 (196)
Q Consensus 108 ya~~vl~~ldp~~~~--f~~~l~r~ 130 (196)
.-+.=++.|... ++ .++.+-|+
T Consensus 174 ~r~aT~~NL~ka-Gy~~~~~LiLR~ 197 (275)
T TIGR01680 174 KQAVTEANLKKA-GYHTWEKLILKD 197 (275)
T ss_pred HHHHHHHHHHHc-CCCCcceeeecC
Confidence 666666666443 22 24455564
No 182
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=87.80 E-value=0.99 Score=35.41 Aligned_cols=82 Identities=16% Similarity=0.171 Sum_probs=45.0
Q ss_pred EeeCccHHHHHHHhhhC-ceEEEEcCCchh-------hHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCC
Q psy17244 79 VHKRPHVDFFLDIVSQW-YELVVFTASMEI-------YGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDL 150 (196)
Q Consensus 79 v~~RP~l~eFL~~l~~~-yei~I~T~~~~~-------ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~ 150 (196)
...=||+.|.|+.|.+. +++++-|+.... -..+.++..-|. -....+++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~---------K~--~v~~D- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD---------KT--LVGGD- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS---------GG--GC--S-
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC---------CC--eEecc-
Confidence 56679999999999965 577777776544 223444444332 12223333211 22 23333
Q ss_pred CcEEEEECCCccccCCCCceEeecee
Q psy17244 151 SSIFILDNSPGAYRGFPDNAIPIKSW 176 (196)
Q Consensus 151 ~~~iiIDD~~~~~~~~~~N~I~v~~f 176 (196)
++|||++.........|+++.=|
T Consensus 139 ---vlIDD~~~n~~~~~~~g~~~iLf 161 (191)
T PF06941_consen 139 ---VLIDDRPHNLEQFANAGIPVILF 161 (191)
T ss_dssp ---EEEESSSHHHSS-SSESSEEEEE
T ss_pred ---EEecCChHHHHhccCCCceEEEE
Confidence 89999999887666667554444
No 183
>PRK11590 hypothetical protein; Provisional
Probab=87.38 E-value=0.97 Score=36.04 Aligned_cols=17 Identities=41% Similarity=0.679 Sum_probs=14.2
Q ss_pred CCeEEEEeCCCceeeee
Q psy17244 31 KRKVLVLDLDETLIHSH 47 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~ 47 (196)
.++.++||+||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 56799999999999543
No 184
>KOG1615|consensus
Probab=87.25 E-value=1.6 Score=35.11 Aligned_cols=85 Identities=9% Similarity=0.167 Sum_probs=58.9
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEE-EecCCCC----------CCC---Ccccc
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRY-YRQHCTP----------ELG---SYTKD 142 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l-~r~~c~~----------~~~---~~~Kd 142 (196)
..+-||++|+...|. +...+++-|-|-...+..|.+.|+... .++...+ +-..-.+ +.+ ..+.-
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~ 166 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL 166 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence 467899999999998 789999999999999999999998752 2343333 2211111 111 22333
Q ss_pred ccccCCCCCcEEEEECCCcccc
Q psy17244 143 LSAISPDLSSIFILDNSPGAYR 164 (196)
Q Consensus 143 L~~l~~~~~~~iiIDD~~~~~~ 164 (196)
|++ +.+-+.+++|=|-..-..
T Consensus 167 lrk-~~~~~~~~mvGDGatDle 187 (227)
T KOG1615|consen 167 LRK-NYNYKTIVMVGDGATDLE 187 (227)
T ss_pred HHh-CCChheeEEecCCccccc
Confidence 444 778888899988776544
No 185
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=87.01 E-value=0.55 Score=43.08 Aligned_cols=87 Identities=8% Similarity=0.092 Sum_probs=63.0
Q ss_pred EEEEeeCccHHHHHHHhh-hCc-eEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcE
Q psy17244 76 RFFVHKRPHVDFFLDIVS-QWY-ELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSI 153 (196)
Q Consensus 76 ~~~v~~RP~l~eFL~~l~-~~y-ei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~ 153 (196)
...-..|||+.+.+++|. +.+ +++|-|+..+.+|+.+++.++.. .+|.... ..++ .+-++.++...+++
T Consensus 358 ~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~-~~f~~~~-----p~~K---~~~i~~l~~~~~~v 428 (536)
T TIGR01512 358 LLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID-EVHAELL-----PEDK---LEIVKELREKYGPV 428 (536)
T ss_pred EEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh-hhhhccC-----cHHH---HHHHHHHHhcCCEE
Confidence 445678999999999998 578 99999999999999999999886 3553211 1111 23455556666899
Q ss_pred EEEECCCccccCCCCceE
Q psy17244 154 FILDNSPGAYRGFPDNAI 171 (196)
Q Consensus 154 iiIDD~~~~~~~~~~N~I 171 (196)
++|-|...-...-...++
T Consensus 429 ~~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 429 AMVGDGINDAPALAAADV 446 (536)
T ss_pred EEEeCCHHHHHHHHhCCE
Confidence 999999875543333333
No 186
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=86.85 E-value=0.3 Score=37.29 Aligned_cols=15 Identities=27% Similarity=0.620 Sum_probs=12.9
Q ss_pred EEEEeCCCceeeeec
Q psy17244 34 VLVLDLDETLIHSHH 48 (196)
Q Consensus 34 ~LVLDLD~TLv~s~~ 48 (196)
.++|||||||+++..
T Consensus 1 ~vlFDlDgtLv~~~~ 15 (183)
T TIGR01509 1 AILFDLDGVLVDTSS 15 (183)
T ss_pred CeeeccCCceechHH
Confidence 379999999999953
No 187
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=86.47 E-value=0.53 Score=42.94 Aligned_cols=34 Identities=24% Similarity=0.225 Sum_probs=24.6
Q ss_pred eecCCCCcccccccCCCCCeEEEEeCCCceeeee
Q psy17244 14 YEIFPLSPLSRHRLSIVKRKVLVLDLDETLIHSH 47 (196)
Q Consensus 14 ~~~~~~~p~~~~~~~~~~k~~LVLDLD~TLv~s~ 47 (196)
|..-+.+|.++.........++++|+||||.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~FDfDGTLt~~~ 37 (497)
T PLN02177 4 GASRRFEPISKCSSEGRSNQTVAADLDGTLLISR 37 (497)
T ss_pred cccCCCCccccCCcccccccEEEEecCCcccCCC
Confidence 4445666666655555567789999999999954
No 188
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=85.84 E-value=0.31 Score=43.70 Aligned_cols=16 Identities=31% Similarity=0.694 Sum_probs=14.3
Q ss_pred eEEEEeCCCceeeeec
Q psy17244 33 KVLVLDLDETLIHSHH 48 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~ 48 (196)
+.++||+||||++|..
T Consensus 242 k~vIFDlDGTLiDs~~ 257 (459)
T PRK06698 242 QALIFDMDGTLFQTDK 257 (459)
T ss_pred hheeEccCCceecchh
Confidence 5799999999999964
No 189
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=85.80 E-value=0.65 Score=36.93 Aligned_cols=96 Identities=13% Similarity=0.124 Sum_probs=66.3
Q ss_pred EEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH----HHhcCCCceeeEEEEecCCCC-CCCCccccccccCCCC
Q psy17244 77 FFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA----DKLDARRHILRRRYYRQHCTP-ELGSYTKDLSAISPDL 150 (196)
Q Consensus 77 ~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl----~~ldp~~~~f~~~l~r~~c~~-~~~~~~KdL~~l~~~~ 150 (196)
+.-.+=|.+-+++++-. ....++|||+|+-. |+++. +..|.. .+|+..+....-.. ..+.|.|.+..+|-++
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~-~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLN-SLFSGYFDTTIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHH-hhhcceeeccccccccchhHHHHHHhcCCCc
Confidence 34556789999998886 68999999999854 33332 233444 57765554322222 1347899999999999
Q ss_pred CcEEEEECCCccccCCCCceEeec
Q psy17244 151 SSIFILDNSPGAYRGFPDNAIPIK 174 (196)
Q Consensus 151 ~~~iiIDD~~~~~~~~~~N~I~v~ 174 (196)
..++++-|++.-.....+-|+.+.
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~ 201 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATG 201 (229)
T ss_pred hheEEecCCHHHHHHHHhcchhee
Confidence 999999999987655555555443
No 190
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=85.79 E-value=0.34 Score=36.14 Aligned_cols=14 Identities=36% Similarity=0.745 Sum_probs=12.3
Q ss_pred EEEeCCCceeeeec
Q psy17244 35 LVLDLDETLIHSHH 48 (196)
Q Consensus 35 LVLDLD~TLv~s~~ 48 (196)
|+||+||||+++..
T Consensus 1 iifD~dgtL~d~~~ 14 (176)
T PF13419_consen 1 IIFDLDGTLVDTDP 14 (176)
T ss_dssp EEEESBTTTEEHHH
T ss_pred cEEECCCCcEeCHH
Confidence 68999999998864
No 191
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=85.65 E-value=2.2 Score=34.17 Aligned_cols=38 Identities=21% Similarity=0.009 Sum_probs=33.9
Q ss_pred EeeCccHHHHHH-Hhh-hCceEEEEcCCchhhHHHHHHHh
Q psy17244 79 VHKRPHVDFFLD-IVS-QWYELVVFTASMEIYGAAVADKL 116 (196)
Q Consensus 79 v~~RP~l~eFL~-~l~-~~yei~I~T~~~~~ya~~vl~~l 116 (196)
+..+||+.+.|+ .+. +...++|-|++...|++++++..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 367999999995 787 69999999999999999999773
No 192
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=85.34 E-value=0.61 Score=37.70 Aligned_cols=14 Identities=36% Similarity=0.703 Sum_probs=11.4
Q ss_pred EEEEeCCCceeeee
Q psy17244 34 VLVLDLDETLIHSH 47 (196)
Q Consensus 34 ~LVLDLD~TLv~s~ 47 (196)
.+++||||||+++.
T Consensus 1 li~~DlDgTLl~~~ 14 (236)
T TIGR02471 1 LIITDLDNTLLGDD 14 (236)
T ss_pred CeEEeccccccCCH
Confidence 37889999999753
No 193
>KOG4549|consensus
Probab=84.89 E-value=7.7 Score=29.04 Aligned_cols=79 Identities=13% Similarity=-0.032 Sum_probs=54.5
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCC-chhh
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTAS-MEIY 108 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~-~~~y 108 (196)
...+++||||-||+-.-...++.-.++|.... ....+.-...=|...--|..|+ +..++++.|.+ .+.+
T Consensus 4 ~p~~~~fdldytiwP~~vdthl~~pfkP~k~~---------~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~i 74 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWPRLVDTHLDYPFKPFKCE---------CGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQI 74 (144)
T ss_pred CCceeEEeccceeeeEEEEecccccccccccC---------cccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHH
Confidence 45688999999987775444333223332110 1123344566688889999998 68999999988 5789
Q ss_pred HHHHHHHhcC
Q psy17244 109 GAAVADKLDA 118 (196)
Q Consensus 109 a~~vl~~ldp 118 (196)
|.+.++.+..
T Consensus 75 A~q~L~~fkv 84 (144)
T KOG4549|consen 75 ASQGLETFKV 84 (144)
T ss_pred HHHHHHHhcc
Confidence 9999998864
No 194
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=84.83 E-value=3 Score=34.25 Aligned_cols=57 Identities=14% Similarity=0.121 Sum_probs=39.4
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhH
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYG 109 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya 109 (196)
-.+.+.+||||||+...... .| +...+.++. ..|+|+.-||-+..=.
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~------~p--------------------------A~pv~~el~d~G~~Vi~~SSKT~aE~ 53 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW------QP--------------------------AAPVLLELKDAGVPVILCSSKTRAEM 53 (274)
T ss_pred cceEEEEcccCcccCCCCCC------Cc--------------------------cchHHHHHHHcCCeEEEeccchHHHH
Confidence 34567779999999833211 01 224566666 7899999999888777
Q ss_pred HHHHHHhcCC
Q psy17244 110 AAVADKLDAR 119 (196)
Q Consensus 110 ~~vl~~ldp~ 119 (196)
...-+.|+..
T Consensus 54 ~~l~~~l~v~ 63 (274)
T COG3769 54 LYLQKSLGVQ 63 (274)
T ss_pred HHHHHhcCCC
Confidence 7777777765
No 195
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=84.44 E-value=1.7 Score=42.32 Aligned_cols=60 Identities=13% Similarity=0.046 Sum_probs=40.6
Q ss_pred CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh--hCceEEEEcCCch
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS--QWYELVVFTASME 106 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~--~~yei~I~T~~~~ 106 (196)
..++..++||+||||+...... ...-|++.+.|+.|+ +...++|-|.-+.
T Consensus 593 ~~~~rlI~LDyDGTLlp~~~~~----------------------------~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~ 644 (854)
T PLN02205 593 RTTTRAILLDYDGTLMPQASID----------------------------KSPSSKSIDILNTLCRDKNNMVFIVSARSR 644 (854)
T ss_pred hhcCeEEEEecCCcccCCcccc----------------------------CCCCHHHHHHHHHHHhcCCCEEEEEeCCCH
Confidence 3467889999999999543110 223367777788774 4577777777777
Q ss_pred hhHHHHHHHh
Q psy17244 107 IYGAAVADKL 116 (196)
Q Consensus 107 ~ya~~vl~~l 116 (196)
.-.+.++.-+
T Consensus 645 ~~L~~~f~~~ 654 (854)
T PLN02205 645 KTLADWFSPC 654 (854)
T ss_pred HHHHHHhCCC
Confidence 7777766544
No 196
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=84.37 E-value=2.6 Score=32.55 Aligned_cols=62 Identities=19% Similarity=0.236 Sum_probs=40.4
Q ss_pred EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHH
Q psy17244 35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVA 113 (196)
Q Consensus 35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl 113 (196)
+|.|+|||+-.|--... .+.+ +.. =+.+||+-++...++ +.|.++=-|+-.-..|...-
T Consensus 2 VvsDIDGTiT~SD~~G~-------------i~~~-~G~------d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr 61 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLGH-------------ILPI-LGK------DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTR 61 (157)
T ss_pred EEEeccCCcCccchhhh-------------hhhc-cCc------hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHH
Confidence 78899999998842111 0000 011 167999999999998 67888777777655555444
Q ss_pred HHh
Q psy17244 114 DKL 116 (196)
Q Consensus 114 ~~l 116 (196)
+.|
T Consensus 62 ~~L 64 (157)
T PF08235_consen 62 SWL 64 (157)
T ss_pred HHH
Confidence 443
No 197
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=83.24 E-value=1.6 Score=35.35 Aligned_cols=51 Identities=16% Similarity=0.032 Sum_probs=30.9
Q ss_pred EEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCce--EEEEcCCchhhHHHH
Q psy17244 36 VLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYE--LVVFTASMEIYGAAV 112 (196)
Q Consensus 36 VLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~ye--i~I~T~~~~~ya~~v 112 (196)
.||.||||......+. ....-|++.+.|+.|++... ++|-|.-+..-.+..
T Consensus 1 ~lDyDGTL~p~~~~p~--------------------------~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPD--------------------------AAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp EEE-TTTSS---S-GG--------------------------G----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred CcccCCccCCCCCCcc--------------------------ccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 4899999997764321 15667999999999997665 888888887774444
No 198
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=81.79 E-value=2.2 Score=32.68 Aligned_cols=47 Identities=11% Similarity=0.143 Sum_probs=36.9
Q ss_pred eCccHH----HHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCC-ceeeEEE
Q psy17244 81 KRPHVD----FFLDIVS-QWYELVVFTASMEIYGAAVADKLDARR-HILRRRY 127 (196)
Q Consensus 81 ~RP~l~----eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~-~~f~~~l 127 (196)
.+|++. ++++++. +.++++|-|++...+++.+++.++... .++...+
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 356666 9999985 899999999999999999999887552 2444444
No 199
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=80.11 E-value=1.5 Score=36.14 Aligned_cols=55 Identities=18% Similarity=0.135 Sum_probs=34.3
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHH-HhhhCceEEEEcCCchhhHH
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLD-IVSQWYELVVFTASMEIYGA 110 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~-~l~~~yei~I~T~~~~~ya~ 110 (196)
+..|+.||||||+... -.-+.-+.++++ ......-+++-|..+..-+.
T Consensus 2 ~~ll~sDlD~Tl~~~~-------------------------------~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~ 50 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD-------------------------------DEALARLEELLEQQARPEILFVYVTGRSLESVL 50 (247)
T ss_dssp SEEEEEETBTTTBHCH-------------------------------HHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHH
T ss_pred CEEEEEECCCCCcCCC-------------------------------HHHHHHHHHHHHHhhCCCceEEEECCCCHHHHH
Confidence 5689999999999111 011344555666 23356777777777888888
Q ss_pred HHHHHhc
Q psy17244 111 AVADKLD 117 (196)
Q Consensus 111 ~vl~~ld 117 (196)
.++....
T Consensus 51 ~~~~~~~ 57 (247)
T PF05116_consen 51 RLLREYN 57 (247)
T ss_dssp HHHHHCT
T ss_pred HHHHhCC
Confidence 8887653
No 200
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=79.55 E-value=0.99 Score=36.22 Aligned_cols=18 Identities=28% Similarity=0.563 Sum_probs=15.0
Q ss_pred CCeEEEEeCCCceeeeec
Q psy17244 31 KRKVLVLDLDETLIHSHH 48 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~ 48 (196)
-++..+||+||||.+.-.
T Consensus 4 ~~~la~FDfDgTLt~~ds 21 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQDM 21 (210)
T ss_pred cCcEEEEcCCCCCccCcc
Confidence 466899999999998853
No 201
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=79.04 E-value=1 Score=35.34 Aligned_cols=14 Identities=14% Similarity=0.513 Sum_probs=12.6
Q ss_pred EEEEeCCCceeeee
Q psy17244 34 VLVLDLDETLIHSH 47 (196)
Q Consensus 34 ~LVLDLD~TLv~s~ 47 (196)
++||||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999974
No 202
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=78.09 E-value=1.3 Score=35.07 Aligned_cols=18 Identities=33% Similarity=0.479 Sum_probs=14.9
Q ss_pred CCeEEEEeCCCceeeeec
Q psy17244 31 KRKVLVLDLDETLIHSHH 48 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~ 48 (196)
..+.++||+||||++...
T Consensus 3 ~~k~i~FD~d~TL~d~~~ 20 (229)
T COG1011 3 MIKAILFDLDGTLLDFDS 20 (229)
T ss_pred ceeEEEEecCCcccccch
Confidence 456899999999999753
No 203
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=77.27 E-value=4.3 Score=39.27 Aligned_cols=65 Identities=17% Similarity=0.135 Sum_probs=44.8
Q ss_pred CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh--CceEEEEcCCch
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ--WYELVVFTASME 106 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~T~~~~ 106 (196)
..++..++||.||||+....... .| .-+..-|++.+.|+.|++ .-.|+|-|.-+.
T Consensus 504 ~a~~rll~LDyDGTL~~~~~~~~-----~p------------------~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~ 560 (797)
T PLN03063 504 KSNNRLLILGFYGTLTEPRNSQI-----KE------------------MDLGLHPELKETLKALCSDPKTTVVVLSRSGK 560 (797)
T ss_pred hccCeEEEEecCccccCCCCCcc-----cc------------------ccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCH
Confidence 44677899999999994332110 00 114456888889999974 578888888888
Q ss_pred hhHHHHHHHh
Q psy17244 107 IYGAAVADKL 116 (196)
Q Consensus 107 ~ya~~vl~~l 116 (196)
.-.+.++..+
T Consensus 561 ~~L~~~~~~~ 570 (797)
T PLN03063 561 DILDKNFGEY 570 (797)
T ss_pred HHHHHHhCCC
Confidence 8777777653
No 204
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=75.74 E-value=5.8 Score=39.04 Aligned_cols=71 Identities=15% Similarity=0.162 Sum_probs=49.1
Q ss_pred CCCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh--CceEEEEcCCch
Q psy17244 29 IVKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ--WYELVVFTASME 106 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~T~~~~ 106 (196)
..++..++||.||||+.....+ ......+. ...+..-|.+.+.|+.|+. ...|+|-|.-+.
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P--------~~~~~~~~---------~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~ 650 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTP--------GRRGDQIK---------EMELRLHPELKEPLRALCSDPKTTIVVLSGSDR 650 (934)
T ss_pred hccceEEEEecCceeccCCCCc--------cccccccc---------ccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCH
Confidence 4467789999999999764321 11111110 0124455889999999985 588999999999
Q ss_pred hhHHHHHHHh
Q psy17244 107 IYGAAVADKL 116 (196)
Q Consensus 107 ~ya~~vl~~l 116 (196)
.-.+.++..+
T Consensus 651 ~~Le~~fg~~ 660 (934)
T PLN03064 651 SVLDENFGEF 660 (934)
T ss_pred HHHHHHhCCC
Confidence 9998888765
No 205
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=74.59 E-value=4.2 Score=33.70 Aligned_cols=99 Identities=16% Similarity=0.157 Sum_probs=57.6
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhc---CCCceeeEEEEecCCCCC---C----CCcccccccc-
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLD---ARRHILRRRYYRQHCTPE---L----GSYTKDLSAI- 146 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ld---p~~~~f~~~l~r~~c~~~---~----~~~~KdL~~l- 146 (196)
+.+|.|+.+|++.|. ...-+.|||||-..-...++++-. ++-.+++..+.-+..+.- + ..+.|+-..+
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~ 168 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALE 168 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHT
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccccc
Confidence 889999999999999 578999999999999999999863 233455555443322211 1 1334443333
Q ss_pred -------CCCCCcEEEEECCCccccC-----CCCceEeeceec
Q psy17244 147 -------SPDLSSIFILDNSPGAYRG-----FPDNAIPIKSWF 177 (196)
Q Consensus 147 -------~~~~~~~iiIDD~~~~~~~-----~~~N~I~v~~f~ 177 (196)
-...+|+|++=|+.+-..+ ..+|.|.|.=..
T Consensus 169 ~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn 211 (246)
T PF05822_consen 169 DSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLN 211 (246)
T ss_dssp THHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-
T ss_pred CchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecc
Confidence 1356789999999985532 335666654333
No 206
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=72.74 E-value=1.7 Score=32.95 Aligned_cols=13 Identities=31% Similarity=0.554 Sum_probs=11.4
Q ss_pred EEEeCCCceeeee
Q psy17244 35 LVLDLDETLIHSH 47 (196)
Q Consensus 35 LVLDLD~TLv~s~ 47 (196)
+|||+||||+...
T Consensus 2 ~~fD~DgTl~~~~ 14 (177)
T TIGR01488 2 AIFDFDGTLTRQD 14 (177)
T ss_pred EEecCccccccch
Confidence 6899999999765
No 207
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=71.14 E-value=1.7 Score=33.29 Aligned_cols=13 Identities=38% Similarity=0.677 Sum_probs=11.6
Q ss_pred EEEeCCCceeeee
Q psy17244 35 LVLDLDETLIHSH 47 (196)
Q Consensus 35 LVLDLD~TLv~s~ 47 (196)
++||+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999876
No 208
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=69.60 E-value=2.1 Score=33.39 Aligned_cols=13 Identities=31% Similarity=0.440 Sum_probs=11.4
Q ss_pred EEEeCCCceeeee
Q psy17244 35 LVLDLDETLIHSH 47 (196)
Q Consensus 35 LVLDLD~TLv~s~ 47 (196)
.+||+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999874
No 209
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=69.36 E-value=10 Score=25.97 Aligned_cols=16 Identities=38% Similarity=0.387 Sum_probs=14.1
Q ss_pred CeEEEEeCCCceeeee
Q psy17244 32 RKVLVLDLDETLIHSH 47 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~ 47 (196)
..+|||+=|||.|++.
T Consensus 39 ~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 39 VLTLVLEEDGTAVDSE 54 (81)
T ss_pred ceEEEEecCCCEEccH
Confidence 4799999999999875
No 210
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=69.22 E-value=3.1 Score=41.48 Aligned_cols=18 Identities=28% Similarity=0.473 Sum_probs=15.4
Q ss_pred CCeEEEEeCCCceeeeec
Q psy17244 31 KRKVLVLDLDETLIHSHH 48 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~ 48 (196)
.-+.++||+||||+++..
T Consensus 74 ~ikaVIFDlDGTLiDS~~ 91 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSEE 91 (1057)
T ss_pred CCCEEEECCCCCeEeChH
Confidence 456799999999999964
No 211
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=67.64 E-value=11 Score=25.67 Aligned_cols=17 Identities=29% Similarity=0.391 Sum_probs=14.4
Q ss_pred CCeEEEEeCCCceeeee
Q psy17244 31 KRKVLVLDLDETLIHSH 47 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~ 47 (196)
...+|||+=|||.|++.
T Consensus 39 ~~~~lvL~eDGT~Vd~E 55 (78)
T cd06539 39 GLVTLVLEEDGTVVDTE 55 (78)
T ss_pred CCcEEEEeCCCCEEccH
Confidence 35689999999999875
No 212
>PRK10671 copA copper exporting ATPase; Provisional
Probab=64.93 E-value=7.7 Score=37.62 Aligned_cols=85 Identities=9% Similarity=0.096 Sum_probs=60.7
Q ss_pred EEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEE
Q psy17244 78 FVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFIL 156 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiI 156 (196)
.-..||++.+.++++. +.+++++.|+..+..|+.+++.++.. .++.... ...+ .+-++.++...+++++|
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~-~~~~~~~-----p~~K---~~~i~~l~~~~~~v~~v 718 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID-EVIAGVL-----PDGK---AEAIKRLQSQGRQVAMV 718 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-EEEeCCC-----HHHH---HHHHHHHhhcCCEEEEE
Confidence 3467999999999997 68999999999999999999999876 3443211 0011 23444455567789999
Q ss_pred ECCCccccCCCCceE
Q psy17244 157 DNSPGAYRGFPDNAI 171 (196)
Q Consensus 157 DD~~~~~~~~~~N~I 171 (196)
-|...-...-...++
T Consensus 719 GDg~nD~~al~~Agv 733 (834)
T PRK10671 719 GDGINDAPALAQADV 733 (834)
T ss_pred eCCHHHHHHHHhCCe
Confidence 999875544334444
No 213
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=64.49 E-value=20 Score=27.60 Aligned_cols=45 Identities=7% Similarity=0.098 Sum_probs=22.2
Q ss_pred eCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEE
Q psy17244 81 KRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRY 127 (196)
Q Consensus 81 ~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l 127 (196)
.|-.+.++|+.+. +.-.|++|-++.+.-+ ++..++.....+.+++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~t--lln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGNT--LLNYFGLDNDLIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHHH--HHHHHT--TTTS--EE
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHHH--HHHHhCCCcceeEEEE
Confidence 3445667777776 5667888888877654 4555555434454433
No 214
>KOG2134|consensus
Probab=63.87 E-value=16 Score=32.34 Aligned_cols=56 Identities=21% Similarity=0.253 Sum_probs=33.4
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCc
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASM 105 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~ 105 (196)
+.+.+-||+|||||+...... -+....| +.+..++.. .=|.++. +.|-++|+|+..
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~v-----f~~~~~d-------------w~~l~~~vp-~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKV-----FPKGSMD-------------WRILFPEVP-SKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CcceEEEecCCceeecCCcce-----eeccCcc-------------ceeeccccc-hhhhhhccCCeEEEEEeccc
Confidence 557789999999999874221 1111111 122233333 4455665 789999999765
No 215
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=63.76 E-value=15 Score=24.73 Aligned_cols=16 Identities=31% Similarity=0.466 Sum_probs=14.0
Q ss_pred CeEEEEeCCCceeeee
Q psy17244 32 RKVLVLDLDETLIHSH 47 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~ 47 (196)
..+|||+=|||.|.+.
T Consensus 38 ~~~l~L~eDGT~VddE 53 (74)
T smart00266 38 PVTLVLEEDGTIVDDE 53 (74)
T ss_pred CcEEEEecCCcEEccH
Confidence 5689999999999875
No 216
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=61.96 E-value=12 Score=25.50 Aligned_cols=16 Identities=38% Similarity=0.364 Sum_probs=13.9
Q ss_pred CeEEEEeCCCceeeee
Q psy17244 32 RKVLVLDLDETLIHSH 47 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~ 47 (196)
..+|||+-|||.|.+.
T Consensus 39 ~~~lvL~eDGT~Vd~E 54 (79)
T cd06538 39 ISSLVLDEDGTGVDTE 54 (79)
T ss_pred ccEEEEecCCcEEccH
Confidence 3689999999999775
No 217
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=60.91 E-value=16 Score=24.79 Aligned_cols=17 Identities=29% Similarity=0.321 Sum_probs=14.4
Q ss_pred CCeEEEEeCCCceeeee
Q psy17244 31 KRKVLVLDLDETLIHSH 47 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~ 47 (196)
...+|||+-|||.|...
T Consensus 39 ~~~~lvL~eDGTeVddE 55 (78)
T cd01615 39 APVTLVLEEDGTEVDDE 55 (78)
T ss_pred CCeEEEEeCCCcEEccH
Confidence 45589999999999775
No 218
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=60.29 E-value=15 Score=25.02 Aligned_cols=17 Identities=29% Similarity=0.364 Sum_probs=14.4
Q ss_pred CCeEEEEeCCCceeeee
Q psy17244 31 KRKVLVLDLDETLIHSH 47 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~ 47 (196)
...+|||+-|||.|.+.
T Consensus 41 ~~~~lvL~eDGT~VddE 57 (80)
T cd06536 41 APITLVLAEDGTIVEDE 57 (80)
T ss_pred CceEEEEecCCcEEccH
Confidence 35689999999999875
No 219
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=59.08 E-value=5.9 Score=30.69 Aligned_cols=15 Identities=20% Similarity=0.341 Sum_probs=12.7
Q ss_pred eEEEEeCCCceeeee
Q psy17244 33 KVLVLDLDETLIHSH 47 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~ 47 (196)
.+++||.||||....
T Consensus 2 ~~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 2 DAICFDKTGTLTQGK 16 (215)
T ss_dssp SEEEEECCTTTBESH
T ss_pred eEEEEecCCCcccCe
Confidence 479999999997764
No 220
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=58.32 E-value=7.3 Score=26.48 Aligned_cols=17 Identities=29% Similarity=0.313 Sum_probs=14.1
Q ss_pred CCeEEEEeCCCceeeee
Q psy17244 31 KRKVLVLDLDETLIHSH 47 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~ 47 (196)
....|||+-|||.|...
T Consensus 39 ~~~~lvL~eDGT~VddE 55 (78)
T PF02017_consen 39 EPVRLVLEEDGTEVDDE 55 (78)
T ss_dssp STCEEEETTTTCBESSC
T ss_pred cCcEEEEeCCCcEEccH
Confidence 45589999999999864
No 221
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=57.87 E-value=0.79 Score=37.32 Aligned_cols=88 Identities=9% Similarity=-0.049 Sum_probs=55.2
Q ss_pred CccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEE--EEecCCCCCC---CCccccccccCC-CCCcEE
Q psy17244 82 RPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRR--YYRQHCTPEL---GSYTKDLSAISP-DLSSIF 154 (196)
Q Consensus 82 RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~--l~r~~c~~~~---~~~~KdL~~l~~-~~~~~i 154 (196)
-|++.+.|+.+. +...+ |-|+....|+...+..++.. .++... ...+.....+ ..+..-+++++. +.++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g-~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG-YYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc-HHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 489999999876 46666 66999999998776666654 344322 2232222222 245566677764 567999
Q ss_pred EEECCC-ccccCCCCceE
Q psy17244 155 ILDNSP-GAYRGFPDNAI 171 (196)
Q Consensus 155 iIDD~~-~~~~~~~~N~I 171 (196)
+|-|+. .-......+|+
T Consensus 218 ~vGD~~~~Di~~a~~~G~ 235 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGI 235 (242)
T ss_pred EECCCcHHHHHHHHHCCC
Confidence 999995 43444444444
No 222
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=56.46 E-value=31 Score=31.17 Aligned_cols=53 Identities=23% Similarity=0.267 Sum_probs=39.5
Q ss_pred EEEEeeCccHHHHHHHhhh-CceEEEEcCCchhhHHHHHHHh-cC-------CCceeeEEEE
Q psy17244 76 RFFVHKRPHVDFFLDIVSQ-WYELVVFTASMEIYGAAVADKL-DA-------RRHILRRRYY 128 (196)
Q Consensus 76 ~~~v~~RP~l~eFL~~l~~-~yei~I~T~~~~~ya~~vl~~l-dp-------~~~~f~~~l~ 128 (196)
.-||.+-|.+..+|+.+.+ +-.+.+-|++.-.|++.++..+ ++ .+.+|+-++.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 3467779999999999995 5599999999999999999986 55 4678876653
No 223
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=55.40 E-value=8 Score=35.32 Aligned_cols=23 Identities=26% Similarity=0.196 Sum_probs=20.4
Q ss_pred eEEEEcCCchhhHHHHHHH-hcCC
Q psy17244 97 ELVVFTASMEIYGAAVADK-LDAR 119 (196)
Q Consensus 97 ei~I~T~~~~~ya~~vl~~-ldp~ 119 (196)
+++|-|++.+.++++.++. ++.+
T Consensus 110 ~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 110 KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 9999999999999999998 6544
No 224
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=51.91 E-value=8.4 Score=30.07 Aligned_cols=16 Identities=19% Similarity=0.370 Sum_probs=12.0
Q ss_pred CeEEEEeCCCceeeee
Q psy17244 32 RKVLVLDLDETLIHSH 47 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~ 47 (196)
|..|.+|+||||.+..
T Consensus 2 ~i~I~iDiDgVLad~~ 17 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFN 17 (191)
T ss_dssp -EEEEEESBTTTB-HH
T ss_pred CcEEEEECCCCCcccH
Confidence 3459999999999875
No 225
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=50.55 E-value=19 Score=31.26 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=31.7
Q ss_pred EEEeeCc-cHHHHHHHhhh------CceEEEEcCCchhhHHHHHHHh
Q psy17244 77 FFVHKRP-HVDFFLDIVSQ------WYELVVFTASMEIYGAAVADKL 116 (196)
Q Consensus 77 ~~v~~RP-~l~eFL~~l~~------~yei~I~T~~~~~ya~~vl~~l 116 (196)
+.++.|| ++...|+.|.+ -++|+|+-.|...-+..++...
T Consensus 6 v~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~ 52 (334)
T cd02514 6 VIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSF 52 (334)
T ss_pred EEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhh
Confidence 4588999 79999999974 5899999999877666666554
No 226
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=50.41 E-value=13 Score=35.33 Aligned_cols=40 Identities=15% Similarity=0.122 Sum_probs=37.1
Q ss_pred eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC
Q psy17244 80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR 119 (196)
Q Consensus 80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~ 119 (196)
..||++.+.+++|. .+.++++-|-..+.-|..|.+.++..
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId 485 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 485 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc
Confidence 45999999999998 57999999999999999999999876
No 227
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=48.57 E-value=28 Score=27.07 Aligned_cols=106 Identities=12% Similarity=0.129 Sum_probs=63.9
Q ss_pred CCCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHh-hhCceEEEEcCCchhh
Q psy17244 30 VKRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIV-SQWYELVVFTASMEIY 108 (196)
Q Consensus 30 ~~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l-~~~yei~I~T~~~~~y 108 (196)
++-+.+++|.||||-+-...-. .+.+. .+ ....|-|.- ++.+ .-..+++|-|.-...-
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~--------~~Gee----------~K-aFnv~DG~G--ik~l~~~Gi~vAIITGr~s~i 64 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYD--------ENGEE----------IK-AFNVRDGHG--IKLLLKSGIKVAIITGRDSPI 64 (170)
T ss_pred hhceEEEEeccceeecCeEEEc--------CCCce----------ee-eeeccCcHH--HHHHHHcCCeEEEEeCCCCHH
Confidence 3557899999999987653100 00000 11 123344432 2222 3578999999999999
Q ss_pred HHHHHHHhcCCCceeeEEEEecCCCCCCCCccccccccCCCCCcEEEEECCCccc
Q psy17244 109 GAAVADKLDARRHILRRRYYRQHCTPELGSYTKDLSAISPDLSSIFILDNSPGAY 163 (196)
Q Consensus 109 a~~vl~~ldp~~~~f~~~l~r~~c~~~~~~~~KdL~~l~~~~~~~iiIDD~~~~~ 163 (196)
++.=++.|..+ .++..+.-.. ..+..-+.+++.++++|..|=|+---|
T Consensus 65 ve~Ra~~LGI~-~~~qG~~dK~------~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 65 VEKRAKDLGIK-HLYQGISDKL------AAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred HHHHHHHcCCc-eeeechHhHH------HHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 99999999887 3443222111 133455667788888887776665433
No 228
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=47.79 E-value=1.1 Score=37.04 Aligned_cols=90 Identities=11% Similarity=0.091 Sum_probs=54.8
Q ss_pred ccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEE---ecCC---CCCCCCccccccccCCCCCcEEE
Q psy17244 83 PHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYY---RQHC---TPELGSYTKDLSAISPDLSSIFI 155 (196)
Q Consensus 83 P~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~---r~~c---~~~~~~~~KdL~~l~~~~~~~ii 155 (196)
|++.+-++.|. ..+.++|-|+....++......++.. .+|..+.. ++.. ......+..-+++++.+++++++
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g-~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~ 201 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG-PFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVM 201 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch-HHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEE
Confidence 67788888887 56788999988887776555444443 33332211 1111 11122556677788999999999
Q ss_pred EECCC-ccccCCCCceEee
Q psy17244 156 LDNSP-GAYRGFPDNAIPI 173 (196)
Q Consensus 156 IDD~~-~~~~~~~~N~I~v 173 (196)
|.|+. .-......+|+..
T Consensus 202 vGD~~~~Di~~a~~~G~~~ 220 (257)
T TIGR01458 202 IGDDCRDDVGGAQDCGMRG 220 (257)
T ss_pred ECCCcHHHHHHHHHcCCeE
Confidence 99996 4343333444433
No 229
>KOG3189|consensus
Probab=47.78 E-value=30 Score=28.12 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=29.8
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhhCceEEEEcCC
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQWYELVVFTAS 104 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~T~~ 104 (196)
.+..+.+|.||||--.. -..-|-+.+||+.+.+...+.+---+
T Consensus 10 ~~~l~lfdvdgtLt~~r-------------------------------~~~~~e~~~~l~~lr~~v~ig~Vggs 52 (252)
T KOG3189|consen 10 EETLCLFDVDGTLTPPR-------------------------------QKVTPEMLEFLQKLRKKVTIGFVGGS 52 (252)
T ss_pred CceEEEEecCCcccccc-------------------------------ccCCHHHHHHHHHHhhheEEEEeecH
Confidence 44566779999997654 23457788888888877766554433
No 230
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=46.91 E-value=23 Score=28.22 Aligned_cols=105 Identities=12% Similarity=0.133 Sum_probs=58.1
Q ss_pred ccCCCCCeEEEEeCCCceeeeecC-CCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHH------HHHHhhhCceE
Q psy17244 26 RLSIVKRKVLVLDLDETLIHSHHD-GITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDF------FLDIVSQWYEL 98 (196)
Q Consensus 26 ~~~~~~k~~LVLDLD~TLv~s~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~e------FL~~l~~~yei 98 (196)
.+....+.++-||+|.|++.|+.- -... -+.-||-++ |++.+.+..+=
T Consensus 57 SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk-------------------------~~~sPgs~DyLknq~FW~~vn~g~D~ 111 (237)
T COG3700 57 SLEGRPPIAVSFDIDDTVLFSSPGFWRGK-------------------------KYFSPGSEDYLKNQVFWEKVNNGWDE 111 (237)
T ss_pred hhcCCCCeeEeeccCCeeEecccccccCc-------------------------cccCCChHHhhcCHHHHHHHhcCCcc
Confidence 344556778999999999998731 1111 123444444 55666654321
Q ss_pred EEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCC--CCccccccccCCCCCcEEEEECCC
Q psy17244 99 VVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPEL--GSYTKDLSAISPDLSSIFILDNSP 160 (196)
Q Consensus 99 ~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~--~~~~KdL~~l~~~~~~~iiIDD~~ 160 (196)
-+-.+++|.++++-....+.-+-++-.|.....+. ....|+... .++.-+++.-|.+
T Consensus 112 ---~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i--~~m~pv~f~Gdk~ 170 (237)
T COG3700 112 ---FSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI--TNMNPVIFAGDKP 170 (237)
T ss_pred ---ccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc--CCCcceeeccCCC
Confidence 13368999999998776543332333343322211 112233332 4556677777877
No 231
>PF13701 DDE_Tnp_1_4: Transposase DDE domain group 1
Probab=46.24 E-value=28 Score=31.31 Aligned_cols=88 Identities=17% Similarity=0.166 Sum_probs=46.1
Q ss_pred CCeEEEEeCCCceeeeecCCCCCCCCCCC-CCCCcE-EEEEECCeeeEEEEeeCcc-------HHHHHHHhhhC----c-
Q psy17244 31 KRKVLVLDLDETLIHSHHDGITRPTVKPG-TPPDFV-LKVTIDRHPVRFFVHKRPH-------VDFFLDIVSQW----Y- 96 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~~~~~~~~~~~~-~~~d~~-~~~~~~~~~~~~~v~~RP~-------l~eFL~~l~~~----y- 96 (196)
.+.-+|||+|.|.......+.... .... ....|. +-+-....+.-....+||| ..+||+.+-+. +
T Consensus 138 ~~~~i~LDiD~T~~~~~G~Qe~~~-~n~y~g~~gY~PL~~f~g~~G~~l~a~LRpGn~~sa~g~~~fL~~~l~~lr~~~~ 216 (448)
T PF13701_consen 138 PPKEIVLDIDSTVDDVHGEQEGAV-FNTYYGEDGYHPLVAFDGQTGYLLAAELRPGNVHSAKGAAEFLKRVLRRLRQRWP 216 (448)
T ss_pred ccceEEEecccccccchhhccccc-ccccCCCcccccceeccCCCCceEEEEccCCCCChHHHHHHHHHHHHHHHhhhCc
Confidence 346799999999876665433221 1110 111111 1111122445566789996 56677766422 2
Q ss_pred eE-EEEcCCchhhHHHHHHHhcCC
Q psy17244 97 EL-VVFTASMEIYGAAVADKLDAR 119 (196)
Q Consensus 97 ei-~I~T~~~~~ya~~vl~~ldp~ 119 (196)
+. +++=+-+--+...+++.+.-.
T Consensus 217 ~~~ILvR~DSgF~~~el~~~ce~~ 240 (448)
T PF13701_consen 217 DTRILVRGDSGFASPELMDWCEAE 240 (448)
T ss_pred cceEEEEecCccCcHHHHHHHHhC
Confidence 22 344444445666677777554
No 232
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=42.20 E-value=1.5e+02 Score=22.40 Aligned_cols=53 Identities=19% Similarity=0.155 Sum_probs=34.7
Q ss_pred EEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhhh-CceEEEEcCC--chhhHHH
Q psy17244 35 LVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVSQ-WYELVVFTAS--MEIYGAA 111 (196)
Q Consensus 35 LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~-~yei~I~T~~--~~~ya~~ 111 (196)
-+|||||.|++....+. ....+.++++.+ +--++|.|-- ++.+++.
T Consensus 46 AildL~G~~l~l~S~R~-------------------------------~~~~evi~~I~~~G~PviVAtDV~p~P~~V~K 94 (138)
T PF04312_consen 46 AILDLDGELLDLKSSRN-------------------------------MSRSEVIEWISEYGKPVIVATDVSPPPETVKK 94 (138)
T ss_pred EEEecCCcEEEEEeecC-------------------------------CCHHHHHHHHHHcCCEEEEEecCCCCcHHHHH
Confidence 36899999999875432 123456666664 4566666644 5677777
Q ss_pred HHHHhcC
Q psy17244 112 VADKLDA 118 (196)
Q Consensus 112 vl~~ldp 118 (196)
+...++-
T Consensus 95 ia~~f~A 101 (138)
T PF04312_consen 95 IARSFNA 101 (138)
T ss_pred HHHHhCC
Confidence 7777654
No 233
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=42.03 E-value=1e+02 Score=29.58 Aligned_cols=76 Identities=12% Similarity=0.069 Sum_probs=55.2
Q ss_pred eEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCC-CCCCccccccccCCCCCc
Q psy17244 75 VRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTP-ELGSYTKDLSAISPDLSS 152 (196)
Q Consensus 75 ~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~-~~~~~~KdL~~l~~~~~~ 152 (196)
..+.-..||++.+.+++|. ..+++++.|...+..|+.+++.++.. ..+ .+.. ++...++.|+ . .++
T Consensus 563 i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-~~~-------~~~p~~K~~~v~~l~---~-~~~ 630 (741)
T PRK11033 563 IALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-FRA-------GLLPEDKVKAVTELN---Q-HAP 630 (741)
T ss_pred EEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-eec-------CCCHHHHHHHHHHHh---c-CCC
Confidence 3455689999999999997 58999999999999999999999975 111 1211 2333444443 2 257
Q ss_pred EEEEECCCcc
Q psy17244 153 IFILDNSPGA 162 (196)
Q Consensus 153 ~iiIDD~~~~ 162 (196)
|++|-|...-
T Consensus 631 v~mvGDgiND 640 (741)
T PRK11033 631 LAMVGDGIND 640 (741)
T ss_pred EEEEECCHHh
Confidence 8899887653
No 234
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=34.65 E-value=69 Score=21.69 Aligned_cols=13 Identities=31% Similarity=0.161 Sum_probs=11.2
Q ss_pred CeEEEEeCCCcee
Q psy17244 32 RKVLVLDLDETLI 44 (196)
Q Consensus 32 k~~LVLDLD~TLv 44 (196)
..+|+|+-|||.|
T Consensus 40 ~~~l~L~eDGTeV 52 (77)
T cd06535 40 GSRLCLYEDGTEV 52 (77)
T ss_pred CcEEEEecCCcEe
Confidence 3479999999999
No 235
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=32.98 E-value=29 Score=31.40 Aligned_cols=19 Identities=32% Similarity=0.485 Sum_probs=16.2
Q ss_pred CCCCeEEEEeCCCceeeee
Q psy17244 29 IVKRKVLVLDLDETLIHSH 47 (196)
Q Consensus 29 ~~~k~~LVLDLD~TLv~s~ 47 (196)
...++.+|.|+|||+-.|-
T Consensus 372 r~n~kiVVsDiDGTITkSD 390 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSD 390 (580)
T ss_pred eCCCcEEEEecCCcEEehh
Confidence 4578899999999998874
No 236
>COG4271 Predicted nucleotide-binding protein containing TIR -like domain [Transcription]
Probab=32.50 E-value=2e+02 Score=23.35 Aligned_cols=100 Identities=13% Similarity=0.057 Sum_probs=59.6
Q ss_pred hCceEEEEcCCchhhHHHHHHHhcCC--CceeeEEE-EecCCCCC------------CCCccccc----cccCCCCCcEE
Q psy17244 94 QWYELVVFTASMEIYGAAVADKLDAR--RHILRRRY-YRQHCTPE------------LGSYTKDL----SAISPDLSSIF 154 (196)
Q Consensus 94 ~~yei~I~T~~~~~ya~~vl~~ldp~--~~~f~~~l-~r~~c~~~------------~~~~~KdL----~~l~~~~~~~i 154 (196)
.++-..||+-+-..-++.+++.|..+ .--|...+ .-|+-++. ....+-.| .+||| ++++
T Consensus 105 d~~l~~vi~d~~~~~g~~ile~lek~i~~v~FAi~latPDDkgy~~~~~~~k~~praRqNVifELGm~mgrLgR--krv~ 182 (233)
T COG4271 105 DWKLEPVILDGLFSEGQTILESLEKYIAEVKFAIVLATPDDKGYRAVHSREKAFPRARQNVIFELGMFMGRLGR--KRVM 182 (233)
T ss_pred ccccceEEecCcccccHHHHHHHHHHhhhceEEEEEecCcccccccccchhhccccccccchhhHhhHHhhccc--ceEE
Confidence 67788999999999999999888643 11233222 22222111 01111122 22344 7899
Q ss_pred EEECCCccccCCC-CceEeeceecCCCCChHHHhhHHHHhhc
Q psy17244 155 ILDNSPGAYRGFP-DNAIPIKSWFSDPSDTALLALLPVLDAL 195 (196)
Q Consensus 155 iIDD~~~~~~~~~-~N~I~v~~f~~~~~D~~L~~l~~~L~~L 195 (196)
|+.-++....... =+|+...+|.++.+-..=.+|-|-+..+
T Consensus 183 Il~k~~envelPSDi~Gv~yi~fK~D~~kd~~~~la~e~~~~ 224 (233)
T COG4271 183 ILMKRDENVELPSDIAGVTYISFKDDLQKDAGPDLAPEMTAQ 224 (233)
T ss_pred EEecccccccCccccCceEEEeecCCcchhccchhhHHHHhc
Confidence 9988888776655 5899999998765532224455554443
No 237
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=30.02 E-value=69 Score=26.66 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=36.4
Q ss_pred EEeeCccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHhcC
Q psy17244 78 FVHKRPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKLDA 118 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp 118 (196)
..++-||+++-+..+.+...-+|-|.+...|+..++..++-
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCC
Confidence 36788999999999999888888888999999999998874
No 238
>KOG2630|consensus
Probab=29.38 E-value=30 Score=28.63 Aligned_cols=81 Identities=15% Similarity=0.082 Sum_probs=48.4
Q ss_pred CccHHHHHHHhh-hCceEEEEcCCchhhHHHHHH-HhcCC--CceeeEEEEecCCCCC--CCCccccccccCCCCCcEEE
Q psy17244 82 RPHVDFFLDIVS-QWYELVVFTASMEIYGAAVAD-KLDAR--RHILRRRYYRQHCTPE--LGSYTKDLSAISPDLSSIFI 155 (196)
Q Consensus 82 RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~-~ldp~--~~~f~~~l~r~~c~~~--~~~~~KdL~~l~~~~~~~ii 155 (196)
=|.+-.+++.-+ ..-.++|||+++-. |++++- .-+.. +++++..+. ..-+.. ...|.|..+.+|.+++++++
T Consensus 125 ~aDv~~a~e~w~~~g~~vyIYSSgsv~-AqKllfg~s~~gdl~~y~~gyfD-t~iG~K~e~~sy~~I~~~Ig~s~~eiLf 202 (254)
T KOG2630|consen 125 YADVLPAIERWSGEGVRVYIYSSGSVA-AQKLLFGYSDAGDLRKYISGYFD-TTIGLKVESQSYKKIGHLIGKSPREILF 202 (254)
T ss_pred cchhHHHHHHHhhcCceEEEEcCCcHH-HHHHHHcccCcchHHHHhhhhhh-ccccceehhHHHHHHHHHhCCChhheEE
Confidence 355566666665 67799999999864 333222 11110 123322221 111111 23678888999999999999
Q ss_pred EECCCcccc
Q psy17244 156 LDNSPGAYR 164 (196)
Q Consensus 156 IDD~~~~~~ 164 (196)
+-|.+....
T Consensus 203 LTd~~~Ea~ 211 (254)
T KOG2630|consen 203 LTDVPREAA 211 (254)
T ss_pred eccChHHHH
Confidence 999987543
No 239
>KOG3040|consensus
Probab=29.07 E-value=1.8e+02 Score=23.98 Aligned_cols=55 Identities=20% Similarity=0.154 Sum_probs=43.3
Q ss_pred CeEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHH
Q psy17244 32 RKVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGA 110 (196)
Q Consensus 32 k~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~ 110 (196)
-+.+.+||-|||-.+. .-=||..|-|+.|. ++..+-.-|++++.--+
T Consensus 7 v~gvLlDlSGtLh~e~--------------------------------~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~ 54 (262)
T KOG3040|consen 7 VKGVLLDLSGTLHIED--------------------------------AAVPGAVEALKRLRDQHVKVKFVTNTTKESKR 54 (262)
T ss_pred cceEEEeccceEeccc--------------------------------ccCCCHHHHHHHHHhcCceEEEEecCcchhHH
Confidence 3567889999986553 13588999999998 88899999999888777
Q ss_pred HHHHHhcC
Q psy17244 111 AVADKLDA 118 (196)
Q Consensus 111 ~vl~~ldp 118 (196)
.+.++|..
T Consensus 55 ~l~~rL~r 62 (262)
T KOG3040|consen 55 NLHERLQR 62 (262)
T ss_pred HHHHHHHH
Confidence 77777753
No 240
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=28.54 E-value=26 Score=29.30 Aligned_cols=25 Identities=0% Similarity=-0.126 Sum_probs=14.8
Q ss_pred ccccccccCCCCCcEEEEECCCccc
Q psy17244 139 YTKDLSAISPDLSSIFILDNSPGAY 163 (196)
Q Consensus 139 ~~KdL~~l~~~~~~~iiIDD~~~~~ 163 (196)
|.+..++.|++--.-+.|=|-.+..
T Consensus 219 Fe~I~~Rfg~p~~~f~~IGDG~eEe 243 (274)
T TIGR01658 219 FKWIKERFGHPKVRFCAIGDGWEEC 243 (274)
T ss_pred HHHHHHHhCCCCceEEEeCCChhHH
Confidence 4555666666555556666666543
No 241
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=26.98 E-value=1.4e+02 Score=21.83 Aligned_cols=38 Identities=21% Similarity=0.167 Sum_probs=27.3
Q ss_pred EEeeCccHHHHHHHh---hhCceEEEEcCCchhhHHHHHHH
Q psy17244 78 FVHKRPHVDFFLDIV---SQWYELVVFTASMEIYGAAVADK 115 (196)
Q Consensus 78 ~v~~RP~l~eFL~~l---~~~yei~I~T~~~~~ya~~vl~~ 115 (196)
...-||.+++.+... ...-.+.|++.|.+...+.+-+.
T Consensus 114 ~~~gRP~~~~~~~~~~~~~~~~~~~V~~CGP~~m~~~vr~~ 154 (156)
T PF08030_consen 114 VHYGRPDLDEILSEVASQQSSGRVAVFVCGPPSMVDDVRNA 154 (156)
T ss_dssp EEES---HHHHHHHHHHHSTT-EEEEEEES-HHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHhCCCCcEEEEEcCcHHHHHHHHHH
Confidence 456699999999999 25679999999999999887654
No 242
>PF04989 CmcI: Cephalosporin hydroxylase; InterPro: IPR007072 This entry contains Rhamnosyl O-methyltransferase which catalyses the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) []. Members of this family are about 220 amino acids long. It also includes the CmcI protein O85726 from SWISSPROT, which is presumed to represent the cephalosporin-7--hydroxylase []. However this has not been experimentally verified.; GO: 0008168 methyltransferase activity, 0008610 lipid biosynthetic process; PDB: 2BR4_B 2BR3_E 2BR5_E 2BM8_J 2BM9_E.
Probab=25.95 E-value=1.2e+02 Score=24.48 Aligned_cols=79 Identities=8% Similarity=0.081 Sum_probs=38.0
Q ss_pred HHHHHHHhhh--CceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCC--------------CC-----Cccccc
Q psy17244 85 VDFFLDIVSQ--WYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPE--------------LG-----SYTKDL 143 (196)
Q Consensus 85 l~eFL~~l~~--~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~--------------~~-----~~~KdL 143 (196)
..+.|-++++ ..|+.++.-|+-.+-..+++.+.+.+++++--+.-..|... .| .....+
T Consensus 24 ~qeli~~~kPd~IIE~Gi~~GGSli~~A~ml~~~~~~~~VigiDIdir~~~~~a~e~hp~~~rI~~i~Gds~d~~~~~~v 103 (206)
T PF04989_consen 24 YQELIWELKPDLIIETGIAHGGSLIFWASMLELLGGKGKVIGIDIDIRPHNRKAIESHPMSPRITFIQGDSIDPEIVDQV 103 (206)
T ss_dssp HHHHHHHH--SEEEEE--TTSHHHHHHHHHHHHTT---EEEEEES-GTT--S-GGGG----TTEEEEES-SSSTHHHHTS
T ss_pred HHHHHHHhCCCeEEEEecCCCchHHHHHHHHHHhCCCceEEEEeCCcchhchHHHhhccccCceEEEECCCCCHHHHHHH
Confidence 3466666764 58999999999999999999997665444322211111110 01 111223
Q ss_pred cccCCCCCcEEEEECCCccc
Q psy17244 144 SAISPDLSSIFILDNSPGAY 163 (196)
Q Consensus 144 ~~l~~~~~~~iiIDD~~~~~ 163 (196)
+.+-...+.+++|||+...+
T Consensus 104 ~~~~~~~~~vlVilDs~H~~ 123 (206)
T PF04989_consen 104 RELASPPHPVLVILDSSHTH 123 (206)
T ss_dssp GSS----SSEEEEESS----
T ss_pred HHhhccCCceEEEECCCccH
Confidence 33344678999999998443
No 243
>cd02974 AhpF_NTD_N Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) family, N-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which in turn catalyzes the reduction of hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD forming two contiguous TRX-fold subdomain similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The N-terminal TRX-fold subdomain of AhpF NTD is redox inactive, but is proposed to contain an important residue that aids in the catalytic function of the redox-active CXXC motif contained in the C-terminal TRX-
Probab=25.77 E-value=76 Score=22.05 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=27.3
Q ss_pred CccHHHHHHHhhhCceEEEEcCCchhhHHHHHHHh
Q psy17244 82 RPHVDFFLDIVSQWYELVVFTASMEIYGAAVADKL 116 (196)
Q Consensus 82 RP~l~eFL~~l~~~yei~I~T~~~~~ya~~vl~~l 116 (196)
|-.+++.++.|.+-.++.+++... +|+..+.+.+
T Consensus 7 ~~qL~~~f~~l~~pV~l~~f~~~~-~~~~e~~~ll 40 (94)
T cd02974 7 KQQLKAYLERLENPVELVASLDDS-EKSAELLELL 40 (94)
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCC-cchHHHHHHH
Confidence 556788888888889999999876 7877776666
No 244
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=25.57 E-value=99 Score=29.55 Aligned_cols=41 Identities=10% Similarity=0.032 Sum_probs=38.0
Q ss_pred EeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC
Q psy17244 79 VHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR 119 (196)
Q Consensus 79 v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~ 119 (196)
=..||++.+.+++|. ...++++-|...+.-|..+.+.++-.
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~ 486 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD 486 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 378999999999998 57999999999999999999999875
No 245
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=25.47 E-value=58 Score=30.01 Aligned_cols=18 Identities=17% Similarity=0.505 Sum_probs=15.0
Q ss_pred CCeEEEEeCCCceeeeec
Q psy17244 31 KRKVLVLDLDETLIHSHH 48 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~~ 48 (196)
...++|.|+||||+.|..
T Consensus 49 ~~~t~v~d~~g~Ll~s~s 66 (525)
T PLN02588 49 SNHTLIFNVEGALLKSNS 66 (525)
T ss_pred ccceEEEecccceeccCC
Confidence 466899999999998753
No 246
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=25.33 E-value=1.4e+02 Score=26.94 Aligned_cols=105 Identities=18% Similarity=0.208 Sum_probs=55.6
Q ss_pred eEEEEeeCcc-HHHHHHHhh------hCceEEEEcCCchhhHHHHHHHhcCCCceeeEEEEecCCCCCCC----------
Q psy17244 75 VRFFVHKRPH-VDFFLDIVS------QWYELVVFTASMEIYGAAVADKLDARRHILRRRYYRQHCTPELG---------- 137 (196)
Q Consensus 75 ~~~~v~~RP~-l~eFL~~l~------~~yei~I~T~~~~~ya~~vl~~ldp~~~~f~~~l~r~~c~~~~~---------- 137 (196)
.-+..+.||. +...|+.|. +.|.|+|.-.|...-+..++......-.++.+.-..+.......
T Consensus 97 VlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~~~y~~IA 176 (434)
T PF03071_consen 97 VLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEKKFKGYYKIA 176 (434)
T ss_dssp EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-GGGHHHHHHH
T ss_pred EEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHHhhhhheeeecCCcCCceeCcccccccchHHHH
Confidence 4567889999 888888884 35889999999888888888877433233332211111111110
Q ss_pred -CccccccccC--CCCCcEEEEECCCcccc-------------CCCCceEeeceecCC
Q psy17244 138 -SYTKDLSAIS--PDLSSIFILDNSPGAYR-------------GFPDNAIPIKSWFSD 179 (196)
Q Consensus 138 -~~~KdL~~l~--~~~~~~iiIDD~~~~~~-------------~~~~N~I~v~~f~~~ 179 (196)
.|.--|+.+. .+-+.+||++|+-..-. .+-++..+|..|.++
T Consensus 177 ~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSawNdn 234 (434)
T PF03071_consen 177 RHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAWNDN 234 (434)
T ss_dssp HHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES--TT
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEccccC
Confidence 1122233332 35678999999875321 234678889999864
No 247
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=24.27 E-value=1e+02 Score=30.24 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=37.0
Q ss_pred eeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHhcCC
Q psy17244 80 HKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKLDAR 119 (196)
Q Consensus 80 ~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ldp~ 119 (196)
..||++.+.++.|. .+..+++-|...+.-|..+++.++..
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 56999999999998 68999999999999999999999764
No 248
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=23.49 E-value=1.4e+02 Score=23.80 Aligned_cols=30 Identities=10% Similarity=0.045 Sum_probs=25.3
Q ss_pred HHHHHHhh-hCceEEEEcCCchhhHHHHHHH
Q psy17244 86 DFFLDIVS-QWYELVVFTASMEIYGAAVADK 115 (196)
Q Consensus 86 ~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~ 115 (196)
.+|.+.+. .+.++++||-..++.++.+.+.
T Consensus 184 ~~~v~~~~~~G~~v~~WTvn~~~~~~~l~~~ 214 (226)
T cd08568 184 VELLRLLRKLGLKIVLWTVNDPELVPKLKGL 214 (226)
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 68888887 6899999999999888877653
No 249
>PF14824 Sirohm_synth_M: Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=23.31 E-value=1.4e+02 Score=16.40 Aligned_cols=22 Identities=5% Similarity=0.178 Sum_probs=15.9
Q ss_pred ceEEEEcCC-chhhHHHHHHHhc
Q psy17244 96 YELVVFTAS-MEIYGAAVADKLD 117 (196)
Q Consensus 96 yei~I~T~~-~~~ya~~vl~~ld 117 (196)
-.|+|-|+| ++.+|..+-+.|+
T Consensus 5 LqI~ISTnG~sP~la~~iR~~ie 27 (30)
T PF14824_consen 5 LQIAISTNGKSPRLARLIRKEIE 27 (30)
T ss_dssp EEEEEEESSS-HHHHHHHHHHHH
T ss_pred eEEEEECCCCChHHHHHHHHHHH
Confidence 468899998 5778877776664
No 250
>KOG2882|consensus
Probab=22.28 E-value=2.2e+02 Score=24.45 Aligned_cols=48 Identities=15% Similarity=0.182 Sum_probs=34.0
Q ss_pred eEEEEeCCCceeeeecCCCCCCCCCCCCCCCcEEEEEECCeeeEEEEeeCccHHHHHHHhh-hCceEEEEcCCch----h
Q psy17244 33 KVLVLDLDETLIHSHHDGITRPTVKPGTPPDFVLKVTIDRHPVRFFVHKRPHVDFFLDIVS-QWYELVVFTASME----I 107 (196)
Q Consensus 33 ~~LVLDLD~TLv~s~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~----~ 107 (196)
=|++||.||.|+.-. ..=||+-|-++.|. ..-.+.+-|+.+- .
T Consensus 23 DtfifDcDGVlW~g~--------------------------------~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~ 70 (306)
T KOG2882|consen 23 DTFIFDCDGVLWLGE--------------------------------KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQ 70 (306)
T ss_pred CEEEEcCCcceeecC--------------------------------CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHH
Confidence 379999999999732 22488889999987 4566777777653 4
Q ss_pred hHHHH
Q psy17244 108 YGAAV 112 (196)
Q Consensus 108 ya~~v 112 (196)
|+++.
T Consensus 71 y~kK~ 75 (306)
T KOG2882|consen 71 YMKKF 75 (306)
T ss_pred HHHHH
Confidence 55443
No 251
>KOG3128|consensus
Probab=21.74 E-value=1e+02 Score=25.98 Aligned_cols=89 Identities=13% Similarity=0.224 Sum_probs=54.5
Q ss_pred EEEEeeCccHHHHHHHhh-hCceEEEEcCCchhhHHHHHHHh---cCCCceeeEE-EEecC---CCCCCC---Ccccccc
Q psy17244 76 RFFVHKRPHVDFFLDIVS-QWYELVVFTASMEIYGAAVADKL---DARRHILRRR-YYRQH---CTPELG---SYTKDLS 144 (196)
Q Consensus 76 ~~~v~~RP~l~eFL~~l~-~~yei~I~T~~~~~ya~~vl~~l---dp~~~~f~~~-l~r~~---c~~~~~---~~~KdL~ 144 (196)
..-+.+|-|+.+|++.|. ....+.|||||--.-.+.++.+- -|..+..+.- -|++. |...+. .+.|+-+
T Consensus 134 ~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~ 213 (298)
T KOG3128|consen 134 ESNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSS 213 (298)
T ss_pred HhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchH
Confidence 345789999999999998 67899999999888777776653 2322222211 12211 222211 2233333
Q ss_pred cc---------CCCCCcEEEEECCCcccc
Q psy17244 145 AI---------SPDLSSIFILDNSPGAYR 164 (196)
Q Consensus 145 ~l---------~~~~~~~iiIDD~~~~~~ 164 (196)
.+ ..+-.++|+.=|+.....
T Consensus 214 v~~~~s~yf~~~~~~~nVillGdsigdl~ 242 (298)
T KOG3128|consen 214 VLQNESEYFHQLAGRVNVILLGDSIGDLH 242 (298)
T ss_pred HHHhhhHHHhhccCCceEEEeccccccch
Confidence 33 236678999999887654
No 252
>PF00034 Cytochrom_C: Cytochrome c; InterPro: IPR003088 Cytochromes c (cytC) can be defined as electron-transfer proteins having one or several haem c groups, bound to the protein by one or, more generally, two thioether bonds involving sulphydryl groups of cysteine residues. The fifth haem iron ligand is always provided by a histidine residue. CytC possess a wide range of properties and function in a large number of different redox processes. Ambler [] recognised four classes of cytC. Class I includes the low-spin soluble cytC of mitochondria and bacteria, with the haem-attachment site towards the N terminus, and the sixth ligand provided by a methionine residue about 40 residues further on towards the C terminus. On the basis of sequence similarity, class I cytC were further subdivided into five classes, IA to IE. Class IB includes the eukaryotic mitochondrial cytC and prokaryotic 'short' cyt c2 exemplified by Rhodopila globiformis cyt c2; class IA includes 'long' cyt c2, such as Rhodospirillum rubrum cyt c2 and Aquaspirillum itersonii cyt c-550, which have several extra loops by comparison with class IB cytC.; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0020037 heme binding; PDB: 1YNR_B 2AI5_A 1AYG_A 3O5C_C 1YEA_A 3CXH_W 1YTC_A 1YEB_A 2YBB_Y 2B4Z_A ....
Probab=21.49 E-value=63 Score=20.64 Aligned_cols=18 Identities=28% Similarity=0.289 Sum_probs=14.9
Q ss_pred CCCChHHHhhHHHHhhcC
Q psy17244 179 DPSDTALLALLPVLDALR 196 (196)
Q Consensus 179 ~~~D~~L~~l~~~L~~Lr 196 (196)
.-+|.++.+|+.||++|+
T Consensus 74 ~ls~~e~~~l~ayl~slk 91 (91)
T PF00034_consen 74 ILSDEEIADLAAYLRSLK 91 (91)
T ss_dssp TSSHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 356888999999999886
No 253
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=21.42 E-value=3.2e+02 Score=21.21 Aligned_cols=60 Identities=10% Similarity=0.158 Sum_probs=32.9
Q ss_pred cCCchhhHHHHHHHhcCCCc--eeeEEEEecCCCCCCC-CccccccccCCCCCcEEEEECCCcc
Q psy17244 102 TASMEIYGAAVADKLDARRH--ILRRRYYRQHCTPELG-SYTKDLSAISPDLSSIFILDNSPGA 162 (196)
Q Consensus 102 T~~~~~ya~~vl~~ldp~~~--~f~~~l~r~~c~~~~~-~~~KdL~~l~~~~~~~iiIDD~~~~ 162 (196)
-.|.-..|..+++.|+-... ++...-|++....... ....++.. ...-++++||||-.+.
T Consensus 42 ~~Gg~~fa~~L~~~L~~~~~v~~l~~ssY~~~~~~~~~v~i~~~~~~-~v~gk~VLlVDDIiDT 104 (178)
T PRK15423 42 LRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDE-DIRGKDVLIVEDIIDS 104 (178)
T ss_pred ecCChHHHHHHHHHhCCCcceeEEEEEEecCCCcccCceEEecCCCC-CCCCCEEEEEeeecCc
Confidence 34566788889998876422 3444445543332221 11222221 2344789999997753
No 254
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=21.12 E-value=1.2e+02 Score=25.02 Aligned_cols=25 Identities=16% Similarity=0.348 Sum_probs=22.1
Q ss_pred HHHHHHHhhhCceEEEEcCCchhhH
Q psy17244 85 VDFFLDIVSQWYELVVFTASMEIYG 109 (196)
Q Consensus 85 l~eFL~~l~~~yei~I~T~~~~~ya 109 (196)
.+|++.+|++.|.|+|-|.++..=|
T Consensus 188 IEeLi~eLk~~yTIviVTHnmqQAa 212 (253)
T COG1117 188 IEELITELKKKYTIVIVTHNMQQAA 212 (253)
T ss_pred HHHHHHHHHhccEEEEEeCCHHHHH
Confidence 6899999999999999999987644
No 255
>KOG1618|consensus
Probab=20.92 E-value=83 Score=27.43 Aligned_cols=17 Identities=24% Similarity=0.395 Sum_probs=14.7
Q ss_pred CCeEEEEeCCCceeeee
Q psy17244 31 KRKVLVLDLDETLIHSH 47 (196)
Q Consensus 31 ~k~~LVLDLD~TLv~s~ 47 (196)
.+...+||+||.|+.-.
T Consensus 34 ~~fgfafDIDGVL~RG~ 50 (389)
T KOG1618|consen 34 PTFGFAFDIDGVLFRGH 50 (389)
T ss_pred CceeEEEecccEEEecC
Confidence 67899999999999764
No 256
>PHA03050 glutaredoxin; Provisional
Probab=20.45 E-value=1.6e+02 Score=20.85 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=29.1
Q ss_pred HHHHHHhhhCceEEEEcCCchhhHHHHHHHhcCC
Q psy17244 86 DFFLDIVSQWYELVVFTASMEIYGAAVADKLDAR 119 (196)
Q Consensus 86 ~eFL~~l~~~yei~I~T~~~~~ya~~vl~~ldp~ 119 (196)
.+|++.+-+.-.|.|||...=.|+..+.+.|+-.
T Consensus 3 ~~~v~~~i~~~~V~vys~~~CPyC~~ak~~L~~~ 36 (108)
T PHA03050 3 EEFVQQRLANNKVTIFVKFTCPFCRNALDILNKF 36 (108)
T ss_pred HHHHHHHhccCCEEEEECCCChHHHHHHHHHHHc
Confidence 5788888877889999999999999888888755
Done!