Diaphorina citri psyllid: psy1724


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470---
MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE
ccccccccccccEEEEEEEccccccccccccccEEECcHHHHHHHHHccccccEEEEEEccccccCEEEEEEEEECccccEECcHHHHHccccccccccccccCEEEEEccccccccccccccccEEEEEccccccccCEEEEEEECccccEEcccccccccccHHHccccccccccccCEEEECcccccccccccccccccccccccccccEEEEEEEEEcccccccccccccEEEccHHHHHHHHHccccccEEEEEEccccccCEEEEEEEEEccccCEEccHHHHHccccccccEEEEEEECccccEEEEEECccccccccccccEEEcccccccEEEccccEEEEEEccEEEEEEEEEECcccCEEEEcccCEEECccccccccccccccccccccccccccccccccccCEEEEEEEccccccccccccccccccccccccccccccccccEEEEcccccccccccc
*****PRPFNRSYKCFSVSMF*********RGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQFGFNMFPDIPRPFNRSYKCFSVSMFPG********GGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGY************************************************************GIPHYDYEPNTLVFLRNI********
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MFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLELDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKEFQFGFNMFPDIPRPFNRSYKCFSVSMFPGNEREDVERGGKIIMPPSALEQLTRLNICYPMLFKLTNQKMGRITHSGVLEFVADEGKVYLPYWMMRNLLLDEGELVNIESVSLPVATFSKFQPQTCDFLDITNPKAVLENCLRNFACLTSGDMIAINYNSKIYELCVLETKPGNAVTIIECDMNVDFAPPVGYTEPEKVKEKEEDNMIDPVDLMPEPSGFVAFHGTGNRLDGKRKKKDTVETGGTPTKREYQRGIPHYDYEPNTLVFLRNIKPASAHKE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ubiquitin fusion degradation protein 1 homolog Essential component of the ubiquitin-dependent proteolytic pathway which degrades ubiquitin fusion proteins. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. It may be involved in the development of some ectoderm-derived structures.confidentQ9ES53
Ubiquitin fusion degradation protein 1 homolog Essential component of the ubiquitin-dependent proteolytic pathway which degrades ubiquitin fusion proteins. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. It may be involved in the development of some ectoderm-derived structures.confidentQ92890
Ubiquitin fusion degradation protein 1 homolog Essential component of the ubiquitin-dependent proteolytic pathway which degrades ubiquitin fusion proteins. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope (By similarity). It may be involved in the development of some ectoderm-derived structures.confidentP70362

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0006511 [BP]ubiquitin-dependent protein catabolic processprobableGO:0051603, GO:1901575, GO:0044265, GO:0044260, GO:0044267, GO:0019538, GO:0009056, GO:0009987, GO:0019941, GO:0044237, GO:0043170, GO:0044248, GO:0071704, GO:0008150, GO:0030163, GO:0008152, GO:0044257, GO:0006508, GO:0043632, GO:0044238, GO:0009057
GO:0042221 [BP]response to chemical stimulusprobableGO:0050896, GO:0008150
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0032403 [MF]protein complex bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0005102 [MF]receptor bindingprobableGO:0003674, GO:0005488, GO:0005515

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YUJ, chain A
Confidence level:very confident
Coverage over the Query: 198-383
View the alignment between query and template
View the model in PyMOL
Template: 2YUJ, chain A
Confidence level:very confident
Coverage over the Query: 1-146
View the alignment between query and template
View the model in PyMOL