RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17252
(1076 letters)
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum
[TaxId: 144185]}
Length = 258
Score = 33.2 bits (75), Expect = 0.14
Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Query: 887 RLDYKIANAVWWYYFSKLLEFCDTFFFILRKKDAQLTFLHVYHHSTMFFLWWIGIKWVPS 946
R+D NA + F F + + + FL + + G+ +
Sbjct: 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTA 142
Query: 947 GSTFLPAMVNSFIHVLMYSYYALAALGPHIAKYL 980
+ + N + + + + L + A
Sbjct: 143 SVGGIRGIGNQSGY--AAAKHGVVGLTRNSAVEY 174
>d1m6ba3 g.3.9.1 (A:166-310) Receptor protein-tyrosine kinase Erbb-3
Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 145
Score = 32.0 bits (71), Expect = 0.15
Identities = 24/150 (16%), Positives = 31/150 (20%), Gaps = 7/150 (4%)
Query: 421 CTPICLTECTPTCLTECTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPICLTECTLV 480
C +C C +C + T C P C C +C
Sbjct: 2 CHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFA 61
Query: 481 CLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTE 540
C P + F P F C+
Sbjct: 62 CRHFNDSGACVPRCP-QPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRA 120
Query: 541 CTPVCLTECTPVCFTKCTPVCLTECTPVCP 570
C P E C P C +CP
Sbjct: 121 C-PPDKMEVDKNGLKMCEP-----CGGLCP 144
Score = 30.9 bits (68), Expect = 0.42
Identities = 21/132 (15%), Positives = 28/132 (21%), Gaps = 3/132 (2%)
Query: 453 CTPVCFTKCTPVCLTECTPICLTECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPI 512
C VC +C +C + T C C C +C
Sbjct: 2 CHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFA 61
Query: 513 CLTECTPVCLTECTPVCFTKCTPVCLTECTPVCLTECTPVCFTKCTPVCLT---ECTPVC 569
C P E P + VC C + C C
Sbjct: 62 CRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRAC 121
Query: 570 PSECTPVCLTEC 581
P + V
Sbjct: 122 PPDKMEVDKNGL 133
Score = 30.5 bits (67), Expect = 0.53
Identities = 18/121 (14%), Positives = 23/121 (19%), Gaps = 1/121 (0%)
Query: 493 CTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPVCLTECTPV 552
C VC +C C + T C P C C +C
Sbjct: 2 CHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFA 61
Query: 553 CFTKCTPVCLTECTPVCPSECTPVCLTECTPVCFTKCTPICLTECTPVCFTKCTPICLTE 612
C P P + P F C+
Sbjct: 62 CRHFNDSGACVPRCP-QPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRA 120
Query: 613 C 613
C
Sbjct: 121 C 121
Score = 29.7 bits (65), Expect = 0.85
Identities = 23/141 (16%), Positives = 28/141 (19%), Gaps = 2/141 (1%)
Query: 349 CTPICLTECTPICLTECTPICLTECTPICLTECTPICLTECTPVCLTECTPIYLTECTPI 408
C +C C +C + T C P C C +C
Sbjct: 2 CHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFA 61
Query: 409 CLTECTPIYLTECTPICLTECTPTCLTECTPICLTECTPVCLTECTPVCFTKCTPVCLTE 468
C P L T P F C+
Sbjct: 62 CRHFNDSGACVPRCPQPLVYNKLTF-QLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRA 120
Query: 469 CTPICLTECTLVCLTKCTPVC 489
C P E L C P
Sbjct: 121 C-PPDKMEVDKNGLKMCEPCG 140
Score = 29.0 bits (63), Expect = 1.5
Identities = 16/110 (14%), Positives = 24/110 (21%)
Query: 509 CTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPVCLTECTPVCFTKCTPVCLTECTPV 568
C +C C +C + T C P C C +C
Sbjct: 2 CHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFA 61
Query: 569 CPSECTPVCLTECTPVCFTKCTPICLTECTPVCFTKCTPICLTECTPICL 618
C P E P + +C+ C +
Sbjct: 62 CRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFV 111
Score = 29.0 bits (63), Expect = 2.0
Identities = 19/132 (14%), Positives = 27/132 (20%), Gaps = 3/132 (2%)
Query: 469 CTPICLTECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPV 528
C +C C C + T C P C C +C
Sbjct: 2 CHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFA 61
Query: 529 CFTKCTPVCLTECTPVCLTECTPVCFTKCTPVCLTECTPVCPSECTPVCLT---ECTPVC 585
C P L + P + VC + C + C C
Sbjct: 62 CRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRAC 121
Query: 586 FTKCTPICLTEC 597
+
Sbjct: 122 PPDKMEVDKNGL 133
Score = 28.2 bits (61), Expect = 3.0
Identities = 21/132 (15%), Positives = 27/132 (20%), Gaps = 3/132 (2%)
Query: 485 CTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPV 544
C VC +C C + T C P C C +C
Sbjct: 2 CHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFA 61
Query: 545 CLTECTPVCFTKCTPVCLTECTPVCPSECTPVCLTECTPVCFTKCTPICLT---ECTPVC 601
C P L E P + VC C + C C
Sbjct: 62 CRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRAC 121
Query: 602 FTKCTPICLTEC 613
+
Sbjct: 122 PPDKMEVDKNGL 133
Score = 28.2 bits (61), Expect = 3.2
Identities = 17/137 (12%), Positives = 25/137 (18%), Gaps = 4/137 (2%)
Query: 340 SCTPICLTECTPICLTECTPICLTECTPICLTECTPICLTECTPICLTECTPVCLTECTP 399
C C + C T IC +C C C + + C
Sbjct: 5 VCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFACRH 64
Query: 400 IYLT---ECTPICLTECTPIYLTECTPICLTECTPTCLTECTPICLTECTPVCLTECTPV 456
+ + P C+ C P
Sbjct: 65 FNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRAC-PP 123
Query: 457 CFTKCTPVCLTECTPIC 473
+ L C P
Sbjct: 124 DKMEVDKNGLKMCEPCG 140
Score = 27.0 bits (58), Expect = 6.7
Identities = 21/141 (14%), Positives = 26/141 (18%), Gaps = 2/141 (1%)
Query: 397 CTPIYLTECTPICLTECTPIYLTECTPICLTECTPTCLTECTPICLTECTPVCLTECTPV 456
C + C +C + T C P C C +C
Sbjct: 2 CHEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFA 61
Query: 457 CFTKCTPVCLTECTPICLTECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPICLTE 516
C P L L P F C+
Sbjct: 62 CRHFNDSGACVPRCPQPLVYNKLTF-QLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRA 120
Query: 517 CTPVCLTECTPVCFTKCTPVC 537
C P E C P
Sbjct: 121 C-PPDKMEVDKNGLKMCEPCG 140
>d1n8yc3 g.3.9.1 (C:166-322) Protooncoprotein Her2 extracellular
domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 157
Score = 32.1 bits (71), Expect = 0.16
Identities = 26/154 (16%), Positives = 37/154 (24%), Gaps = 2/154 (1%)
Query: 444 ECTPVCLTECTPVCFTKCTPVCLTECTPICLTECTLVCLTKCTPVCFTKCTPVCFTKCTP 503
C P C+ + C IC + C C + C + T
Sbjct: 5 ACPPCAPACKDNHCWGESPEDCQILTGTICTSGCAR-CKGRLPTDCCHEQCAAGCTGPKH 63
Query: 504 VCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPVCLTECTPVCFTKCTPVCLT 563
C + + + E C C +
Sbjct: 64 SDCLACLHFNHSGICELHCPALVTYNTDTFESMHNPEGRYTFGASCVTTCPYNYLSTEVG 123
Query: 564 ECTPVCPSECTPVCLTECTPVCFTKCTPICLTEC 597
CT VCP V + T C KC+ C C
Sbjct: 124 SCTLVCPPNNQEVTAEDGTQRC-EKCSKPCARVC 156
Score = 30.6 bits (67), Expect = 0.50
Identities = 20/143 (13%), Positives = 27/143 (18%)
Query: 473 CLTECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTK 532
C C +P T T C + C E T
Sbjct: 9 CAPACKDNHCWGESPEDCQILTGTICTSGCARCKGRLPTDCCHEQCAAGCTGPKHSDCLA 68
Query: 533 CTPVCLTECTPVCLTECTPVCFTKCTPVCLTECTPVCPSECTPVCLTECTPVCFTKCTPI 592
C + + + E + C C CT +
Sbjct: 69 CLHFNHSGICELHCPALVTYNTDTFESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTLV 128
Query: 593 CLTECTPVCFTKCTPICLTECTP 615
C V T C P
Sbjct: 129 CPPNNQEVTAEDGTQRCEKCSKP 151
Score = 29.4 bits (64), Expect = 1.5
Identities = 23/144 (15%), Positives = 31/144 (21%), Gaps = 4/144 (2%)
Query: 460 KCTPVCLTE-CTPICLTECTLVCLTKCTPV---CFTKCTPVCFTKCTPVCFTKCTPICLT 515
C P C C +C ++ T CT C + C + T
Sbjct: 8 PCAPACKDNHCWGESPEDCQILTGTICTSGCARCKGRLPTDCCHEQCAAGCTGPKHSDCL 67
Query: 516 ECTPVCLTECTPVCFTKCTPVCLTECTPVCLTECTPVCFTKCTPVCLTECTPVCPSECTP 575
C + + + E C C CT
Sbjct: 68 ACLHFNHSGICELHCPALVTYNTDTFESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTL 127
Query: 576 VCLTECTPVCFTKCTPICLTECTP 599
VC V T C P
Sbjct: 128 VCPPNNQEVTAEDGTQRCEKCSKP 151
Score = 28.3 bits (61), Expect = 2.9
Identities = 19/143 (13%), Positives = 26/143 (18%)
Query: 441 CLTECTPVCLTECTPVCFTKCTPVCLTECTPICLTECTLVCLTKCTPVCFTKCTPVCFTK 500
C C +P T T C C + T
Sbjct: 9 CAPACKDNHCWGESPEDCQILTGTICTSGCARCKGRLPTDCCHEQCAAGCTGPKHSDCLA 68
Query: 501 CTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPVCLTECTPVCFTKCTPV 560
C + + + + C C CT V
Sbjct: 69 CLHFNHSGICELHCPALVTYNTDTFESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTLV 128
Query: 561 CLTECTPVCPSECTPVCLTECTP 583
C V + T C P
Sbjct: 129 CPPNNQEVTAEDGTQRCEKCSKP 151
Score = 28.3 bits (61), Expect = 3.1
Identities = 21/143 (14%), Positives = 29/143 (20%)
Query: 409 CLTECTPIYLTECTPICLTECTPTCLTECTPICLTECTPVCLTECTPVCFTKCTPVCLTE 468
C C + +P T T T C C E T
Sbjct: 9 CAPACKDNHCWGESPEDCQILTGTICTSGCARCKGRLPTDCCHEQCAAGCTGPKHSDCLA 68
Query: 469 CTPICLTECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPV 528
C + + + + C C + CT V
Sbjct: 69 CLHFNHSGICELHCPALVTYNTDTFESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTLV 128
Query: 529 CFTKCTPVCLTECTPVCLTECTP 551
C V + T C P
Sbjct: 129 CPPNNQEVTAEDGTQRCEKCSKP 151
Score = 28.3 bits (61), Expect = 3.8
Identities = 22/149 (14%), Positives = 31/149 (20%), Gaps = 1/149 (0%)
Query: 393 CLTECTPIYLTECTPICLTECTPIYLTECTPICLTECTPTCLTECTPICLTECTPVCLTE 452
C C + +P T T C C E T
Sbjct: 9 CAPACKDNHCWGESPEDCQILTGTICTSGCARCKGRLPTDCCHEQCAAGCTGPKHSDCLA 68
Query: 453 CTPVCFTKCTPVCLTECTPICLTECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPI 512
C + + + + C C CT +
Sbjct: 69 CLHFNHSGICELHCPALVTYNTDTFESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTLV 128
Query: 513 CLTECTPVCLTECTPVCFTKCTPVCLTEC 541
C V + T C KC+ C C
Sbjct: 129 CPPNNQEVTAEDGTQRC-EKCSKPCARVC 156
Score = 27.9 bits (60), Expect = 5.1
Identities = 19/138 (13%), Positives = 26/138 (18%)
Query: 481 CLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTE 540
C C +P T T C C E T
Sbjct: 9 CAPACKDNHCWGESPEDCQILTGTICTSGCARCKGRLPTDCCHEQCAAGCTGPKHSDCLA 68
Query: 541 CTPVCLTECTPVCFTKCTPVCLTECTPVCPSECTPVCLTECTPVCFTKCTPICLTECTPV 600
C + + + E C C + CT V
Sbjct: 69 CLHFNHSGICELHCPALVTYNTDTFESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTLV 128
Query: 601 CFTKCTPICLTECTPICL 618
C + + T C
Sbjct: 129 CPPNNQEVTAEDGTQRCE 146
Score = 27.5 bits (59), Expect = 6.7
Identities = 26/149 (17%), Positives = 33/149 (22%), Gaps = 6/149 (4%)
Query: 342 TPICLTECTPICLTECTPICLTECTPICLTECTPICLTECTPICLTECTPVCLTECTPIY 401
C E C IC + C C C E T C
Sbjct: 15 DNHCWGESPEDCQILTGTICTSGCAR-CKGRLPTDCCHEQCAAGCTGPKHSDCLACLHFN 73
Query: 402 LTECTPICLTECTPIYLTECTPICLTECTPTCLTECTPICLTECTPVCLTECTPVCFTKC 461
+ + + E T C C + CT VC
Sbjct: 74 HSGICELHCPALVTYNTDTFESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTLVCPPNN 133
Query: 462 TPVCLTECTPICLTECTLVCLTKCTPVCF 490
V + T C C C VC+
Sbjct: 134 QEVTAEDGTQRCEK-----CSKPCARVCY 157
>d2cvca1 a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 505
Score = 33.2 bits (73), Expect = 0.16
Identities = 16/178 (8%), Positives = 30/178 (16%), Gaps = 1/178 (0%)
Query: 430 TPTCLTECTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPICLTECTLVCLTKCTPVC 489
+ + + C+ C P VC
Sbjct: 291 DSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFD 350
Query: 490 FTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPVCLTEC 549
+ ++ L+ T K + +
Sbjct: 351 AKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPH 410
Query: 550 TPVCFTKCTPVCLTECTPVCPSECTPVCLTECTPVCFTKCTPICLTECTPVCFTKCTP 607
+ T + + E +C C TP C F
Sbjct: 411 RKIVKTLIAGIGEDKLAATFHIEKGTLCQG-CHHNSPASLTPPKCASCHGKPFDADRG 467
Score = 31.7 bits (69), Expect = 0.50
Identities = 15/187 (8%), Positives = 32/187 (17%), Gaps = 2/187 (1%)
Query: 425 CLTECTPTCLTECTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPICLTECTLVCLTK 484
C TC T + + + C+ C
Sbjct: 272 CHHVRIDTCTACHTVNGTADSK--FVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGF 329
Query: 485 CTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPV 544
P VC + L ++ + T
Sbjct: 330 IKPTKSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLND 389
Query: 545 CLTECTPVCFTKCTPVCLTECTPVCPSECTPVCLTECTPVCFTKCTPICLTECTPVCFTK 604
+ K + + + + + +C +
Sbjct: 390 IPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASL 449
Query: 605 CTPICLT 611
P C +
Sbjct: 450 TPPKCAS 456
Score = 29.7 bits (64), Expect = 2.3
Identities = 19/214 (8%), Positives = 35/214 (16%), Gaps = 9/214 (4%)
Query: 361 CLTECTPICLTECTPICLTECTPICLTECTPVCLTECTPIYLTECTPICLTECTPIYLTE 420
+ + + C+ C P +C +
Sbjct: 294 FVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQ 353
Query: 421 CTPICLTECTPTCLTECTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPICLTECTLV 480
L ++ L+ T K + + +
Sbjct: 354 VEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKI 413
Query: 481 CLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTE 540
T + K F C TP C F
Sbjct: 414 VKTLIAGIGEDKLAA-TFHIEKGTLCQGCHHNSPASLTPPKCASCHGKPFDADRGDRPGL 472
Query: 541 CTPVCLTECTPVCFTKCTPVCLTECTPVCPSECT 574
+C C + + C
Sbjct: 473 KAA-YHQQCMG-CHDRMK------IEKPANTACV 498
Score = 28.6 bits (61), Expect = 5.2
Identities = 16/173 (9%), Positives = 28/173 (16%), Gaps = 5/173 (2%)
Query: 405 CTPICLTECTPIYLTECTPICLTECTPTCLTECTPICLTECTPVCLTECTPVCFTKCTPV 464
P + C + T C + C +
Sbjct: 302 HQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFDAKQV-EAGALL 360
Query: 465 CLTECTPICLTECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTE 524
L + L + P + + + + T
Sbjct: 361 NLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFP---HRKIVKTL 417
Query: 525 CTPVCFTKCTPVCLTECTPVCLTECTPVCFTKCTPVCLTECTPVCPSECTPVC 577
+ K E +C C TP C
Sbjct: 418 IAGIGEDKLAATFHIEKGTLCQG-CHHNSPASLTPPKCASCHGKPFDADRGDR 469
>d1vqoe2 d.141.1.1 (E:80-172) Ribosomal protein L6 {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 93
Score = 28.9 bits (65), Expect = 0.85
Identities = 6/31 (19%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 1028 VLFGNFYAKAYIHKVFKIHKEKEAKKSKDEI 1058
V+ NF + + IH + + + +E+
Sbjct: 23 VVIENFLGEKAPRRT-TIHGDTDVEIDGEEL 52
>d1igra3 g.3.9.1 (A:150-299) Type 1 insulin-like growth factor
receptor Cys-rich domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 150
Score = 28.1 bits (61), Expect = 3.2
Identities = 15/99 (15%), Positives = 20/99 (20%)
Query: 499 TKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPVCLTECTPVCFTKCT 558
+C +C + C TE C EC C C T
Sbjct: 30 NRCQKMCPSTCGKRACTENNECCHPECLGSCSAPDNDTACVACRHYYYAGVCVPACPPNT 89
Query: 559 PVCLTECTPVCPSECTPVCLTECTPVCFTKCTPICLTEC 597
+ F C+ EC
Sbjct: 90 YRFEGWRCVDRDFCANILSAESSDSEGFVIHDGECMQEC 128
>d1moxa3 g.3.9.1 (A:163-311) EGF receptor Cys-rich domains {Human
(Homo sapiens) [TaxId: 9606]}
Length = 149
Score = 28.2 bits (61), Expect = 3.7
Identities = 21/146 (14%), Positives = 32/146 (21%), Gaps = 3/146 (2%)
Query: 429 CTPTCLTE-CTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPICLTECTLVCLTKCTP 487
C P+C C C + C C +C ++C
Sbjct: 4 CDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCL 63
Query: 488 VCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPVCLT 547
VC P + P C KC + C+
Sbjct: 64 VCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVR 123
Query: 548 ECTPVCFTKCTPVCLTECTPVCPSEC 573
C + + +C C C
Sbjct: 124 ACGADSYE-MEEDGVRKCKK-CEGPC 147
>d1vfia1 g.84.1.1 (A:4-95) Vanadium-binding protein 2, vanabin 2
{Vanadium-rich ascidian (Ascidia sydneiensis samea)
[TaxId: 79730]}
Length = 92
Score = 26.6 bits (58), Expect = 4.8
Identities = 20/102 (19%), Positives = 23/102 (22%), Gaps = 15/102 (14%)
Query: 448 VCLTECTPVCFTKCTPVCLTECTPICLTECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFT 507
C +CT C + C +C C T C C C C
Sbjct: 5 DCKGQCTTPC--EPLTACKEKCAESCETSA---DKKTCRRNCKKADCEPQDKVCDA-CRM 58
Query: 508 KCTPICLTECTPVCLTECTPVCFTKCTPVCLTECTPVCLTEC 549
KC C C C C T C
Sbjct: 59 KCHKACRAAN-------CASECPKHEH--KSDTCRACMKTNC 91
Score = 26.3 bits (57), Expect = 6.6
Identities = 16/79 (20%), Positives = 17/79 (21%), Gaps = 5/79 (6%)
Query: 425 CLTECTPTCLTECTP-ICLTECTPVCLTECTPVCFTKCTPVCLTECTPICLTE-CTLVCL 482
LT C C C C C C C +C C C C
Sbjct: 16 PLTACKEKCAESCETSADKKTCRRNCKKADCEPQDKVCDA-CRMKCHKACRAANCASECP 74
Query: 483 TKCTPVCFTKCTPVCFTKC 501
C T C
Sbjct: 75 KHEH--KSDTCRACMKTNC 91
>d1nqla4 g.3.9.1 (A:481-614) EGF receptor Cys-rich domains {Human
(Homo sapiens) [TaxId: 9606]}
Length = 134
Score = 27.2 bits (59), Expect = 6.1
Identities = 25/119 (21%), Positives = 33/119 (27%), Gaps = 5/119 (4%)
Query: 393 CLTECTPIYLTECTPICLTECTPIYLTECTPICLTECTPTCLTECTPICLTECTPVCLTE 452
C++ EC C C+ +C P CL + I T P +
Sbjct: 19 CVSCRNVSRGRECVDKCKLLEGEPREFVENSECI-QCHPECLPQAMNITCTGRGPDNCIQ 77
Query: 453 CTPVCFTKCTPVCLTECTP-ICLTECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFTKCT 510
C P C+ C + TLV C P C CT C
Sbjct: 78 CAHYID---GPHCVKTCPAGVMGENNTLVWKYADAGHVCHLCHPNCTYGCTGPGLEGCP 133
>d2dtge6 g.3.9.1 (E:157-311) Insulin receptor {Human (Homo sapiens)
[TaxId: 9606]}
Length = 155
Score = 26.9 bits (58), Expect = 8.6
Identities = 21/139 (15%), Positives = 28/139 (20%)
Query: 475 TECTLVCLTKCTPVCFTKCTPVCFTKCTPVCFTKCTPICLTECTPVCLTECTPVCFTKCT 534
+ + C VC T C T C +EC C P C
Sbjct: 14 PATVINGQFVERCWTHSHCQKVCPTICKSHGCTAEGLCCHSECLGNCSQPDDPTKCVACR 73
Query: 535 PVCLTECTPVCLTECTPVCFTKCTPVCLTECTPVCPSECTPVCLTECTPVCFTKCTPICL 594
L + + + KC P C
Sbjct: 74 NFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECP 133
Query: 595 TECTPVCFTKCTPICLTEC 613
+ T CL C
Sbjct: 134 SGYTMNSSNLLCTPCLGPC 152
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.329 0.140 0.461
Gapped
Lambda K H
0.267 0.0442 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,710,104
Number of extensions: 207701
Number of successful extensions: 1891
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1146
Number of HSP's successfully gapped: 241
Length of query: 1076
Length of database: 2,407,596
Length adjustment: 95
Effective length of query: 981
Effective length of database: 1,103,246
Effective search space: 1082284326
Effective search space used: 1082284326
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.8 bits)