BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17256
(768 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340384014|ref|XP_003390510.1| PREDICTED: hypothetical protein LOC100638826 [Amphimedon
queenslandica]
Length = 1577
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 181/464 (39%), Positives = 269/464 (57%), Gaps = 2/464 (0%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGDEKKNYVKEKV 190
P +GY+PEP+K L++ L+ A LLF D V IV + +FLGGVIGN + +++ K
Sbjct: 1108 PLFGYFPEPSKCHLIVSESNLDNARLLFRDTGVNIVKDGKFLGGVIGNKVARDSFISSKS 1167
Query: 191 NQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVP 250
+W +++LS PQ+A+ V++K+LQ EW +LQR+++ C + + I + +P
Sbjct: 1168 EKWSGYIRQLSSLCVSEPQSAYIVLSKALQYEWIYLQRIMSDCGGLFNDVTHDIAHSFLP 1227
Query: 251 SIFEHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQLNLQ 310
S+F +S SE F LP R GGL I DP T+ ++A + + LV+++ +
Sbjct: 1228 SLFGCGVSESERLFFSLPIRMGGLNIKDPTVTSSFSYAASRDATSYLVNAIKNNLDFESE 1287
Query: 311 EHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSD 370
HN CV + + ++ ++ E I++ P +R L + + S+ WL+V P + D
Sbjct: 1288 AHNDCVHASRLSAYNASTSQSEQLYENIMTDASPMLKRTLQKARDCLSA-WLSVPPIAKD 1346
Query: 371 NFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDEC 430
NFDLS +FRD LALRY L LP CDGCG E SVTHAL+C+KGGLV H+ +RD
Sbjct: 1347 NFDLSANEFRDGLALRYGKPLLQLPPTCDGCGSEFSVTHALDCRKGGLVVQRHNEIRDMI 1406
Query: 431 IMMASYAWNGIVKEPIMRDSS-STSPALIADFKINGVWEAGGTAFFDNRIVNADAPSYSS 489
+AS W +VKEP++ DSS S + L+AD I GVW+ TA FD R+V+ DA SY
Sbjct: 1407 CSLASIVWGQVVKEPVVSDSSASDTGGLVADIAIRGVWQRQATALFDVRVVDTDAKSYLR 1466
Query: 490 QTWNTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWK 549
Q+ ++ +EK KY+ A SFTPL S DG + E +FL R+ L+ KW+
Sbjct: 1467 QSPQSVLATAEREKKRKYSAACTARHVSFTPLCFSVDGLMGSETKTFLDRLGDHLASKWE 1526
Query: 550 KMYGHVLSWLRVRTEFSILKAVSLRLRGTRQIVKPYGFDDGAGL 593
+ Y V+ WLRV+ ++L+A L LRGTR ++P +D A +
Sbjct: 1527 RPYSVVVHWLRVKMSMALLRATDLCLRGTRSKLRPMLIEDDAPI 1570
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 98/179 (54%), Gaps = 15/179 (8%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGDEKKNYVKEKV 190
P YGYYPE K LV+ P L+ A+ LF V++ T +R LG V
Sbjct: 388 PSYGYYPESQKCVLVVSPDRLKVANELFASYGVKVTTSQRLLGCV--------------- 432
Query: 191 NQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVP 250
+WI ++KL A+ PQ ++S ++S+Q W +LQRVV C + P+ II L+P
Sbjct: 433 TEWITIIEKLVLIAETQPQLSYSAYSRSIQSHWTYLQRVVPECGSFFEPVENIITEQLLP 492
Query: 251 SIFEHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQLNL 309
+ F EISSSE LF LPTR GGL I +PV+TA H ++ + + + +SL Q ++
Sbjct: 493 TPFGSEISSSEQRLFSLPTRMGGLSILNPVDTATHNYSTSRKLTAPITNSLRCNTQFDM 551
>gi|340383257|ref|XP_003390134.1| PREDICTED: hypothetical protein LOC100637810, partial [Amphimedon
queenslandica]
Length = 938
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 236/421 (56%), Gaps = 11/421 (2%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGDEKKNYVKEKV 190
P +GY+PEP+KS L++K L A F V IV R+LGGVIGN +++V +V
Sbjct: 523 PLFGYFPEPSKSSLIVKDTTLPSAEQSFDGSGVSIVQCGRYLGGVIGNRAGIESFVSSRV 582
Query: 191 NQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVP 250
+ W + V LS A PQAA+ +TK LQ EW FLQRV C D + L + + + +P
Sbjct: 583 SAWSNYVSLLSSIAVDQPQAAYIALTKLLQSEWIFLQRVTPDCGDLFSDLEQALCTHFLP 642
Query: 251 SIFEHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQLNLQ 310
S+ H S + L+ LP R GGL I DP +TA A++ + ++L++S++KQ +
Sbjct: 643 SLTSHACGSHDRFLYSLPIRMGGLNIKDPTKTADQAYSASRNAVRLLMESIIKQSPFSTT 702
Query: 311 EHNQCVKNA----INTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIP 366
+H CV + I T+ R ET ++E LS QR + R + SHWL +P
Sbjct: 703 DHYLCVTQSRLDHIATQNERNETYFKEA----LSLFDARHQRAILRSRDSL-SHWLCALP 757
Query: 367 KSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYL 426
DNF+LS +FRDA+ +RY L LP CDGCG S HAL+C+KGGLV H+ +
Sbjct: 758 VQKDNFNLSSQEFRDAICMRYLKPLVSLPPLCDGCGAPFSTVHALDCRKGGLVSLRHNEI 817
Query: 427 RDECIMMASYAWNGIVKEPIMRDSSST--SPALIADFKINGVWEAGGTAFFDNRIVNADA 484
RD ++S W+ +V+EPI+++ + T S L+AD GVW+ TA FD +V++D+
Sbjct: 818 RDLLCDLSSILWSNVVREPIIQEPNMTTNSEGLVADMAARGVWQRQCTAMFDVPVVDSDS 877
Query: 485 PSYSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHLEFHSFLKRIALVL 544
PSY+++T + +K KY A E SFTPL + DG + E SF+ R A L
Sbjct: 878 PSYANRTPQAVLATAENDKKRKYVAACESNHCSFTPLCLTVDGVMGSEMRSFIDRQADRL 937
Query: 545 S 545
S
Sbjct: 938 S 938
>gi|91078266|ref|XP_971202.1| PREDICTED: similar to GA10520-PA [Tribolium castaneum]
Length = 343
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/153 (88%), Positives = 144/153 (94%), Gaps = 1/153 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
+SFGAKCS C RGI+SSDWVRKARDHVYHLACFAC AC RQLSTGEEFALHEDRVLCK+H
Sbjct: 138 KSFGAKCSVCSRGISSSDWVRKARDHVYHLACFACAACHRQLSTGEEFALHEDRVLCKAH 197
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE +DGGTTSSDDG D+E H K+KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI
Sbjct: 198 YLETLDGGTTSSDDGCDAEGYH-KNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 256
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
AQITGLSKRVTQVWFQNSRARQKKH+HTGK+K+
Sbjct: 257 AQITGLSKRVTQVWFQNSRARQKKHMHTGKIKT 289
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/97 (78%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
DG S D D+E H K+KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG
Sbjct: 203 DGGTTSSDDGCDAEGYH-KNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 261
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKYGY 135
LSKRVTQVWFQNSRARQKKH+HTGK+K +Q+R G+
Sbjct: 262 LSKRVTQVWFQNSRARQKKHMHTGKIK-TQSREDNGF 297
>gi|270004863|gb|EFA01311.1| arrowhead [Tribolium castaneum]
Length = 349
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/153 (88%), Positives = 144/153 (94%), Gaps = 1/153 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
+SFGAKCS C RGI+SSDWVRKARDHVYHLACFAC AC RQLSTGEEFALHEDRVLCK+H
Sbjct: 124 KSFGAKCSVCSRGISSSDWVRKARDHVYHLACFACAACHRQLSTGEEFALHEDRVLCKAH 183
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE +DGGTTSSDDG D+E H K+KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI
Sbjct: 184 YLETLDGGTTSSDDGCDAEGYH-KNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 242
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
AQITGLSKRVTQVWFQNSRARQKKH+HTGK+K+
Sbjct: 243 AQITGLSKRVTQVWFQNSRARQKKHMHTGKIKT 275
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/88 (82%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
DG S D D+E H K+KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG
Sbjct: 189 DGGTTSSDDGCDAEGYH-KNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 247
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKS 126
LSKRVTQVWFQNSRARQKKH+HTGK+K+
Sbjct: 248 LSKRVTQVWFQNSRARQKKHMHTGKIKT 275
>gi|379698940|ref|NP_001243941.1| arrowhead PA [Bombyx mori]
gi|346223348|dbj|BAK78925.1| arrowhead PA [Bombyx mori]
Length = 274
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/155 (86%), Positives = 143/155 (92%), Gaps = 1/155 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
+SFGAKCSKCCRGI+SSDWVRKAR+ VYHLACFAC+AC RQLSTGE+FALHEDRVLCK H
Sbjct: 63 KSFGAKCSKCCRGISSSDWVRKAREQVYHLACFACDACGRQLSTGEQFALHEDRVLCKPH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE +DGG+ SSDDG DSE H KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI
Sbjct: 123 YLETLDGGSISSDDGCDSEGYH-KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQ 767
AQ+TGLSKRVTQVWFQNSRARQKKH HTGK K +Q
Sbjct: 182 AQVTGLSKRVTQVWFQNSRARQKKHQHTGKGKQNQ 216
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 79/96 (82%), Gaps = 1/96 (1%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
DG S D DSE H KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ+TG
Sbjct: 128 DGGSISSDDGCDSEGYH-KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQVTG 186
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKYG 134
LSKRVTQVWFQNSRARQKKH HTGK K +Q + G
Sbjct: 187 LSKRVTQVWFQNSRARQKKHQHTGKGKQNQLMSREG 222
>gi|357605400|gb|EHJ64588.1| hypothetical protein KGM_21596 [Danaus plexippus]
Length = 406
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 143/158 (90%), Gaps = 4/158 (2%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
+SFGAKCSKCCRGI+SSDWVRKAR+ VYHLACFAC+AC RQLSTGE+FALHEDRVLCK H
Sbjct: 193 KSFGAKCSKCCRGISSSDWVRKAREQVYHLACFACDACGRQLSTGEQFALHEDRVLCKPH 252
Query: 673 YLELVDGGTTSSD---DGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
YLE +DGG+ SSD +G DSE H KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL
Sbjct: 253 YLETLDGGSISSDGKCNGCDSEGYH-KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 311
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQ 767
ERIAQ+TGLSKRVTQVWFQNSRARQKKH HTGK K +Q
Sbjct: 312 ERIAQVTGLSKRVTQVWFQNSRARQKKHQHTGKGKQNQ 349
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/79 (89%), Positives = 73/79 (92%), Gaps = 1/79 (1%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DSE H KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ+TGLSKRVTQVWFQ
Sbjct: 272 DSEGYH-KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQVTGLSKRVTQVWFQ 330
Query: 110 NSRARQKKHLHTGKMKSSQ 128
NSRARQKKH HTGK K +Q
Sbjct: 331 NSRARQKKHQHTGKGKQNQ 349
>gi|195125467|ref|XP_002007199.1| GI12512 [Drosophila mojavensis]
gi|193918808|gb|EDW17675.1| GI12512 [Drosophila mojavensis]
Length = 239
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/152 (80%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+ARD V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 27 KNFGAKCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 86
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSDDG D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 87 YLETVEGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 145
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 146 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 177
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G S D D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TG
Sbjct: 92 EGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTG 150
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMK 125
LSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 151 LSKRVTQVWFQNSRARQKKHIHAGKNK 177
>gi|195375542|ref|XP_002046559.1| GJ12418 [Drosophila virilis]
gi|194153717|gb|EDW68901.1| GJ12418 [Drosophila virilis]
Length = 239
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/152 (80%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+ARD V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 27 KNFGAKCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 86
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSDDG D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 87 YLETVEGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 145
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 146 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 177
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G S D D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TG
Sbjct: 92 EGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTG 150
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMK 125
LSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 151 LSKRVTQVWFQNSRARQKKHIHAGKNK 177
>gi|195441498|ref|XP_002068546.1| GK20529 [Drosophila willistoni]
gi|194164631|gb|EDW79532.1| GK20529 [Drosophila willistoni]
Length = 275
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/171 (75%), Positives = 145/171 (84%), Gaps = 7/171 (4%)
Query: 595 YIRVR-ILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
YIR R + K S ++FGAKCSKCCRGI++SDWVR+ARD V+HLACFAC+ C RQ
Sbjct: 49 YIRERQVYCKADYS-----KNFGAKCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQ 103
Query: 654 LSTGEEFALHEDRVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQV 713
LSTGE+FAL +DRVLCK+HYLE V+GGTTSSDDG D + H KSK KRVRTTFTEEQLQV
Sbjct: 104 LSTGEQFALMDDRVLCKAHYLETVEGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQV 162
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
LQANFQ+DSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 163 LQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G S D D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TG
Sbjct: 128 EGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTG 186
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMK 125
LSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 187 LSKRVTQVWFQNSRARQKKHIHAGKNK 213
>gi|195016322|ref|XP_001984389.1| GH16430 [Drosophila grimshawi]
gi|193897871|gb|EDV96737.1| GH16430 [Drosophila grimshawi]
Length = 239
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/152 (80%), Positives = 137/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
+SFGAKCSKCCR I++SDWVR+ARD V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 27 KSFGAKCSKCCRSISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 86
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSDDG D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 87 YLETVEGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 145
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 146 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 177
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G S D D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TG
Sbjct: 92 EGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTG 150
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMK 125
LSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 151 LSKRVTQVWFQNSRARQKKHIHAGKNK 177
>gi|194749355|ref|XP_001957104.1| GF24228 [Drosophila ananassae]
gi|190624386|gb|EDV39910.1| GF24228 [Drosophila ananassae]
Length = 275
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/152 (80%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+ARD V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSDDG D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 123 YLETVEGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G S D D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TG
Sbjct: 128 EGGTTSSDDGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTG 186
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMK 125
LSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 187 LSKRVTQVWFQNSRARQKKHIHAGKNK 213
>gi|328708271|ref|XP_001949712.2| PREDICTED: LIM/homeobox protein Awh-like [Acyrthosiphon pisum]
Length = 346
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/154 (85%), Positives = 143/154 (92%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
RSFG CSKC +GI++S WVRKARDHVYHLACF C+AC RQL+TGEEFALHE RVLCK H
Sbjct: 116 RSFGTVCSKCSKGISASHWVRKARDHVYHLACFRCDACDRQLNTGEEFALHEGRVLCKPH 175
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YL++VDGGTTSS +G DSES HSK+KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI
Sbjct: 176 YLDIVDGGTTSSSEGGDSESYHSKNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 235
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
AQITGLSKRVTQVWFQNSRARQKKHLHTGK+K++
Sbjct: 236 AQITGLSKRVTQVWFQNSRARQKKHLHTGKVKNT 269
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/73 (94%), Positives = 73/73 (100%)
Query: 55 HSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 114
HSK+KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR
Sbjct: 197 HSKNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 256
Query: 115 QKKHLHTGKMKSS 127
QKKHLHTGK+K++
Sbjct: 257 QKKHLHTGKVKNT 269
>gi|195161060|ref|XP_002021388.1| GL25299 [Drosophila persimilis]
gi|198465223|ref|XP_001353549.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
gi|194118501|gb|EDW40544.1| GL25299 [Drosophila persimilis]
gi|198150064|gb|EAL31062.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
Length = 275
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 122/152 (80%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+ARD V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKCCRGISASDWVRRARDLVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSD+G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 123 YLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S+D + KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TGLSK
Sbjct: 130 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSK 189
Query: 102 RVTQVWFQNSRARQKKHLHTGKMK 125
RVTQVWFQNSRARQKKH+H GK K
Sbjct: 190 RVTQVWFQNSRARQKKHIHAGKNK 213
>gi|156367311|ref|XP_001627361.1| predicted protein [Nematostella vectensis]
gi|156214269|gb|EDO35261.1| predicted protein [Nematostella vectensis]
Length = 754
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 235/462 (50%), Gaps = 20/462 (4%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKR-FLGGVIGNGDEKKNYVKEK 189
P GY+P K +LV KP+ E A +F + I TE R LG +G+ + YV K
Sbjct: 276 PDLGYFPNAVKCWLVTKPEKEESARKIFEGTGINITTEGRKHLGAALGSRPHLEQYVDSK 335
Query: 190 VNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLV 249
V++W+ V KL+E A PQA+++ T L+ W + + +D +PL I TL+
Sbjct: 336 VDEWVGQVTKLAEFAVSQPQASYAAYTFGLKHRWTYFLITLPDIEDLLLPLERAISDTLI 395
Query: 250 PSIFEHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQLNL 309
PS+ E + +E +L LP RFGGLGI +P + A F +++ C L EQ+
Sbjct: 396 PSLTERTCTQAERDLLALPVRFGGLGITNPADEASLEFTASTKVCGPLA------EQIKQ 449
Query: 310 QEHNQCVKNAI---NTELVRKETEY-QEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVI 365
Q H +A+ E R++ EY + + + SSLP R + + +S WL V+
Sbjct: 450 QTHELPCDDAVQEAQQEARREKNEYLKSRCAEVKSSLPVNMLRAVDLATQKGTSSWLTVL 509
Query: 366 PKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDY 425
P +FDL+ +FRDAL LRY+ + P+ C CG HA+ CK+GG V H+
Sbjct: 510 PLREMSFDLNKREFRDALGLRYDWEIPETPSIC-VCGDTFDADHAMICKRGGFVIQRHNE 568
Query: 426 LRDECIMMASYAWNGIVKEPIMRD--------SSSTSPALIADFKINGVWEAGGTAFFDN 477
LRD + S + EP+++D ++T+ D G WE AFFD
Sbjct: 569 LRDLEAELLSLVCKDVQTEPVLQDITGEELNRGANTARDARLDIVARGFWERQRQAFFDV 628
Query: 478 RIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHLEFHSFL 537
R+ +A+A SY + I ++H EK E +ASFTPLV + G + E F
Sbjct: 629 RVCHANAESYRDMNIDQIFRQHETEKRQYATRVLEVEQASFTPLVFGSTGGMASECQQFH 688
Query: 538 KRIALVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTR 579
R+A +++EK ++Y +SW+R + F+IL++ L LRG+R
Sbjct: 689 SRLAELIAEKKGELYSTTVSWIRAKVSFAILRSALLCLRGSR 730
>gi|442630036|ref|NP_001261379.1| arrowhead, isoform C [Drosophila melanogaster]
gi|440215263|gb|AGB94074.1| arrowhead, isoform C [Drosophila melanogaster]
Length = 287
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+AR+ V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSD+G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 123 YLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S+D + KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TGLSK
Sbjct: 130 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSK 189
Query: 102 RVTQVWFQNSRARQKKHLHTGKMK 125
RVTQVWFQNSRARQKKH+H GK K
Sbjct: 190 RVTQVWFQNSRARQKKHIHAGKNK 213
>gi|24656992|ref|NP_728906.1| arrowhead, isoform B [Drosophila melanogaster]
gi|194866170|ref|XP_001971791.1| GG15164 [Drosophila erecta]
gi|195491511|ref|XP_002093592.1| GE21383 [Drosophila yakuba]
gi|62510367|sp|Q8IRC7.1|AWH_DROME RecName: Full=LIM/homeobox protein Awh; AltName: Full=Protein
arrowhead
gi|23092944|gb|AAN11572.1| arrowhead, isoform B [Drosophila melanogaster]
gi|94400621|gb|ABF17921.1| FI01007p [Drosophila melanogaster]
gi|190653574|gb|EDV50817.1| GG15164 [Drosophila erecta]
gi|194179693|gb|EDW93304.1| GE21383 [Drosophila yakuba]
Length = 275
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+AR+ V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSD+G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 123 YLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S+D + KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TGLSK
Sbjct: 130 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSK 189
Query: 102 RVTQVWFQNSRARQKKHLHTGKMK 125
RVTQVWFQNSRARQKKH+H GK K
Sbjct: 190 RVTQVWFQNSRARQKKHIHAGKNK 213
>gi|195337236|ref|XP_002035235.1| GM14592 [Drosophila sechellia]
gi|194128328|gb|EDW50371.1| GM14592 [Drosophila sechellia]
Length = 275
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+AR+ V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSD+G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 123 YLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S+D + KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TGLSK
Sbjct: 130 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSK 189
Query: 102 RVTQVWFQNSRARQKKHLHTGKMK 125
RVTQVWFQNSRARQKKH+H GK K
Sbjct: 190 RVTQVWFQNSRARQKKHIHAGKNK 213
>gi|24656997|ref|NP_523907.2| arrowhead, isoform A [Drosophila melanogaster]
gi|23092945|gb|AAF47800.2| arrowhead, isoform A [Drosophila melanogaster]
Length = 214
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 138/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+AR+ V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSD+G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 123 YLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S+D + KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TGLSK
Sbjct: 130 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSK 189
Query: 102 RVTQVWFQNSRARQKKHLHTGKMK 125
RVTQVWFQNSRARQKKH+H GK K
Sbjct: 190 RVTQVWFQNSRARQKKHIHAGKNK 213
>gi|17945534|gb|AAL48819.1| RE24382p [Drosophila melanogaster]
Length = 275
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/152 (78%), Positives = 137/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+AR+ V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSD+G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPD QDLERI
Sbjct: 123 YLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDDQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/84 (76%), Positives = 69/84 (82%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S+D + KSK KRVRTTFTEEQLQVLQANFQ+DSNPD QDLERIA +TGLSK
Sbjct: 130 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDDQDLERIASVTGLSK 189
Query: 102 RVTQVWFQNSRARQKKHLHTGKMK 125
RVTQVWFQNSRARQKKH+H GK K
Sbjct: 190 RVTQVWFQNSRARQKKHIHAGKNK 213
>gi|307182931|gb|EFN69941.1| LIM/homeobox protein Awh [Camponotus floridanus]
Length = 258
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/156 (76%), Positives = 138/156 (88%), Gaps = 2/156 (1%)
Query: 610 ICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLC 669
+C R+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LC
Sbjct: 22 VC-RAFGAKCAKCRRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALVDARLLC 80
Query: 670 KSHYLELVDGGTTSSDDGADSESSH-SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
K+HYL++V+G TSSD+G DSES H +KAKRVRTTFTEEQL VLQANFQLDSNPDGQD
Sbjct: 81 KAHYLDVVEGNNTSSDEGGDSESGHKGGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQD 140
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
LERIA +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 141 LERIAHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 176
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 75/88 (85%), Gaps = 1/88 (1%)
Query: 39 DGFGADSTDHTDSESSH-SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
+G S + DSES H +KAKRVRTTFTEEQL VLQANFQLDSNPDGQDLERIA +T
Sbjct: 89 EGNNTSSDEGGDSESGHKGGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVT 148
Query: 98 GLSKRVTQVWFQNSRARQKKHLHTGKMK 125
GLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 149 GLSKRVTQVWFQNSRARQKKHLHTGKMK 176
>gi|340721611|ref|XP_003399211.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
gi|350404711|ref|XP_003487194.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 334
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/152 (78%), Positives = 136/152 (89%), Gaps = 1/152 (0%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 100 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 159
Query: 674 LELVDGGTTSSDDGADSESSH-SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
L++V+G TSSD+G DSES H S +KAKRVRTTFTEEQL VLQANFQLDSNPDGQDLERI
Sbjct: 160 LDVVEGNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERI 219
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 220 AHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 251
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 85/114 (74%), Gaps = 5/114 (4%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSH-SKSKAKRVRTTFTEEQ 71
R T EQ +L A ++ +G S + DSES H S +KAKRVRTTFTEEQ
Sbjct: 138 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQ 197
Query: 72 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 125
L VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 198 LSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 251
>gi|328781496|ref|XP_001121365.2| PREDICTED: LIM/homeobox protein Awh-like [Apis mellifera]
Length = 332
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/152 (78%), Positives = 136/152 (89%), Gaps = 1/152 (0%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 98 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 157
Query: 674 LELVDGGTTSSDDGADSESSH-SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
L++V+G TSSD+G DSES H S +KAKRVRTTFTEEQL VLQANFQLDSNPDGQDLERI
Sbjct: 158 LDVVEGNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERI 217
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 218 AHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 249
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 85/114 (74%), Gaps = 5/114 (4%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSH-SKSKAKRVRTTFTEEQ 71
R T EQ +L A ++ +G S + DSES H S +KAKRVRTTFTEEQ
Sbjct: 136 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQ 195
Query: 72 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 125
L VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 196 LSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 249
>gi|442630038|ref|NP_001261380.1| arrowhead, isoform D [Drosophila melanogaster]
gi|440215264|gb|AGB94075.1| arrowhead, isoform D [Drosophila melanogaster]
Length = 271
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/147 (80%), Positives = 135/147 (91%), Gaps = 1/147 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+AR+ V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSD+G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 123 YLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLH 759
A +TGLSKRVTQVWFQNSRARQKKH+H
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHIH 208
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/79 (78%), Positives = 67/79 (84%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S+D + KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TGLSK
Sbjct: 130 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSK 189
Query: 102 RVTQVWFQNSRARQKKHLH 120
RVTQVWFQNSRARQKKH+H
Sbjct: 190 RVTQVWFQNSRARQKKHIH 208
>gi|380013153|ref|XP_003690632.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 332
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/152 (78%), Positives = 136/152 (89%), Gaps = 1/152 (0%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 98 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 157
Query: 674 LELVDGGTTSSDDGADSESSH-SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
L++V+G TSSD+G DSES H S +KAKRVRTTFTEEQL VLQANFQLDSNPDGQDLERI
Sbjct: 158 LDVVEGNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERI 217
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 218 AHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 249
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 85/114 (74%), Gaps = 5/114 (4%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSH-SKSKAKRVRTTFTEEQ 71
R T EQ +L A ++ +G S + DSES H S +KAKRVRTTFTEEQ
Sbjct: 136 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQ 195
Query: 72 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 125
L VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 196 LSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 249
>gi|2435404|gb|AAB71337.1| arrowhead [Drosophila melanogaster]
Length = 214
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 119/152 (78%), Positives = 137/152 (90%), Gaps = 1/152 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSK CRGI++SDWVR+AR+ V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKSCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V+GGTTSSD+G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 123 YLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVT+VWFQNSRARQKKH+H GK K
Sbjct: 182 ASVTGLSKRVTEVWFQNSRARQKKHIHAGKNK 213
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/84 (76%), Positives = 70/84 (83%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S+D + KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TGLSK
Sbjct: 130 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSK 189
Query: 102 RVTQVWFQNSRARQKKHLHTGKMK 125
RVT+VWFQNSRARQKKH+H GK K
Sbjct: 190 RVTEVWFQNSRARQKKHIHAGKNK 213
>gi|322787264|gb|EFZ13400.1| hypothetical protein SINV_02203 [Solenopsis invicta]
Length = 333
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 118/152 (77%), Positives = 135/152 (88%), Gaps = 1/152 (0%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 100 AFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 159
Query: 674 LELVDGGTTSSDDGADSESSH-SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
L++V+G TSSD+G DSES H +KAKRVRTTFTEEQL VLQANFQLDSNPDGQDLERI
Sbjct: 160 LDVVEGNNTSSDEGGDSESGHKGGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERI 219
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 220 AHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 251
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 84/114 (73%), Gaps = 5/114 (4%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSH-SKSKAKRVRTTFTEEQ 71
R T EQ +L A ++ +G S + DSES H +KAKRVRTTFTEEQ
Sbjct: 138 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSDEGGDSESGHKGGNKAKRVRTTFTEEQ 197
Query: 72 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 125
L VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 198 LSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 251
>gi|383857877|ref|XP_003704430.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 371
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 118/152 (77%), Positives = 135/152 (88%), Gaps = 1/152 (0%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 138 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 197
Query: 674 LELVDGGTTSSDDGADSESSH-SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
L++V+G TSSD+G DSES H S +KAKRVRTTFTEEQL VLQANFQLDSNPDGQDLERI
Sbjct: 198 LDVVEGNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERI 257
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKHLHTGK K
Sbjct: 258 AHVTGLSKRVTQVWFQNSRARQKKHLHTGKTK 289
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 84/114 (73%), Gaps = 5/114 (4%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSH-SKSKAKRVRTTFTEEQ 71
R T EQ +L A ++ +G S + DSES H S +KAKRVRTTFTEEQ
Sbjct: 176 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSDEGGDSESGHKSGNKAKRVRTTFTEEQ 235
Query: 72 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 125
L VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKKHLHTGK K
Sbjct: 236 LSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKKHLHTGKTK 289
>gi|307195464|gb|EFN77350.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 291
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 118/152 (77%), Positives = 135/152 (88%), Gaps = 1/152 (0%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 59 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 118
Query: 674 LELVDGGTTSSDDGADSESSH-SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
L++V+G TSSD+G DSES H +KAKRVRTTFTEEQL VLQANFQLDSNPDGQDLERI
Sbjct: 119 LDVVEGNNTSSDEGGDSESGHKGGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERI 178
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 179 AHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 210
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 84/114 (73%), Gaps = 5/114 (4%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSH-SKSKAKRVRTTFTEEQ 71
R T EQ +L A ++ +G S + DSES H +KAKRVRTTFTEEQ
Sbjct: 97 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSDEGGDSESGHKGGNKAKRVRTTFTEEQ 156
Query: 72 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 125
L VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKKHLHTGKMK
Sbjct: 157 LSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKKHLHTGKMK 210
>gi|332029130|gb|EGI69141.1| LIM/homeobox protein Awh [Acromyrmex echinatior]
Length = 292
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 134/153 (87%), Gaps = 1/153 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+H
Sbjct: 58 RTFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAH 117
Query: 673 YLELVDGGTTSSDDGADSESSH-SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
YL++V+G SS +G DSES H +KAKRVRTTFTEEQL VLQANFQLDSNPDGQDLER
Sbjct: 118 YLDVVEGNNNSSAEGGDSESGHKGGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLER 177
Query: 732 IAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
IA +TGLSKR+TQVWFQNSRARQKKHLHTGKMK
Sbjct: 178 IAHVTGLSKRITQVWFQNSRARQKKHLHTGKMK 210
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 84/114 (73%), Gaps = 5/114 (4%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSH-SKSKAKRVRTTFTEEQ 71
R T EQ +L A ++ +G S + DSES H +KAKRVRTTFTEEQ
Sbjct: 97 RQLSTGEQFALLDARLLCKAHYLDVVEGNNNSSAEGGDSESGHKGGNKAKRVRTTFTEEQ 156
Query: 72 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 125
L VLQANFQLDSNPDGQDLERIA +TGLSKR+TQVWFQNSRARQKKHLHTGKMK
Sbjct: 157 LSVLQANFQLDSNPDGQDLERIAHVTGLSKRITQVWFQNSRARQKKHLHTGKMK 210
>gi|195587560|ref|XP_002083529.1| GD13784 [Drosophila simulans]
gi|194195538|gb|EDX09114.1| GD13784 [Drosophila simulans]
Length = 278
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/155 (75%), Positives = 136/155 (87%), Gaps = 4/155 (2%)
Query: 613 RSFGAK---CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLC 669
++FGA ++CCRGI++SDWVR+AR+ V+HLACFAC+ C RQLSTGE+FAL +DRVLC
Sbjct: 63 KNFGANDSIAARCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLC 122
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K+HYLE V+GGTTSSD+G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDL
Sbjct: 123 KAHYLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDL 181
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
ERIA +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 182 ERIASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 216
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 70/84 (83%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S+D + KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TGLSK
Sbjct: 133 GTTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSK 192
Query: 102 RVTQVWFQNSRARQKKHLHTGKMK 125
RVTQVWFQNSRARQKKH+H GK K
Sbjct: 193 RVTQVWFQNSRARQKKHIHAGKNK 216
>gi|443703132|gb|ELU00843.1| hypothetical protein CAPTEDRAFT_221751 [Capitella teleta]
Length = 241
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/151 (76%), Positives = 131/151 (86%), Gaps = 6/151 (3%)
Query: 610 ICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLC 669
C R FG KC+KCCR I ++DWVR+AR++VYHLACFAC+ACKRQLSTGEEFAL E+RVLC
Sbjct: 40 FCSREFGVKCAKCCRNIQATDWVRRARENVYHLACFACDACKRQLSTGEEFALQENRVLC 99
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K+HY+E ++GG G+D E+S+ K K KRVRTTFTEEQLQVLQANFQLDSNPDGQDL
Sbjct: 100 KTHYVEAIEGGP-----GSD-ENSNQKQKTKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 153
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKKHLHT 760
ERIAQITGLSKRVTQVWFQNSRARQKKH T
Sbjct: 154 ERIAQITGLSKRVTQVWFQNSRARQKKHQQT 184
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 78/102 (76%), Gaps = 7/102 (6%)
Query: 20 FTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANF 79
F ++ +VL +++ G G+D E+S+ K K KRVRTTFTEEQLQVLQANF
Sbjct: 90 FALQENRVLCKTHYVEAIEGGPGSD-------ENSNQKQKTKRVRTTFTEEQLQVLQANF 142
Query: 80 QLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
QLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH T
Sbjct: 143 QLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHQQT 184
>gi|158296015|ref|XP_316574.4| AGAP006536-PA [Anopheles gambiae str. PEST]
gi|157016309|gb|EAA11386.5| AGAP006536-PA [Anopheles gambiae str. PEST]
Length = 291
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 112/151 (74%), Positives = 133/151 (88%), Gaps = 1/151 (0%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
+ FGAKCSKCCR IA+SDWVRKARD V+HLACF+C+ C RQLSTGE+FAL +D+V+CK
Sbjct: 90 IKMFGAKCSKCCRTIAASDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKI 149
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
HY++ V+ G+ SSDDG S+ ++K+K+KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLER
Sbjct: 150 HYMDTVEDGSNSSDDGCSSDG-YNKNKSKRVRTTFTEEQLQVLQANFQIDSNPDGQDLER 208
Query: 732 IAQITGLSKRVTQVWFQNSRARQKKHLHTGK 762
IAQ+TGLSKRVTQVWFQNSRARQKKH H +
Sbjct: 209 IAQLTGLSKRVTQVWFQNSRARQKKHTHVPR 239
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/82 (76%), Positives = 73/82 (89%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G++S+D S ++K+K+KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIAQ+TGLSK
Sbjct: 158 GSNSSDDGCSSDGYNKNKSKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIAQLTGLSK 217
Query: 102 RVTQVWFQNSRARQKKHLHTGK 123
RVTQVWFQNSRARQKKH H +
Sbjct: 218 RVTQVWFQNSRARQKKHTHVPR 239
>gi|391339813|ref|XP_003744241.1| PREDICTED: sodium-coupled monocarboxylate transporter 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/141 (79%), Positives = 123/141 (87%), Gaps = 1/141 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG +CSKC RGI SSDWVR+ARD VYHLACFACE CKRQLSTGEEFALH+ RVLCK H
Sbjct: 510 RQFGVRCSKCTRGIQSSDWVRRARDQVYHLACFACEECKRQLSTGEEFALHDGRVLCKIH 569
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+ EL+D G+ S+DD AD + + ++K KRVRTTFTEEQLQVLQANF LDSNPDGQDLERI
Sbjct: 570 FCELIDPGSQSTDDNAD-QDHNPRAKTKRVRTTFTEEQLQVLQANFNLDSNPDGQDLERI 628
Query: 733 AQITGLSKRVTQVWFQNSRAR 753
AQITGLSKRVTQVWFQNSRAR
Sbjct: 629 AQITGLSKRVTQVWFQNSRAR 649
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 63/73 (86%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G+ STD + + ++K KRVRTTFTEEQLQVLQANF LDSNPDGQDLERIAQITGLSK
Sbjct: 577 GSQSTDDNADQDHNPRAKTKRVRTTFTEEQLQVLQANFNLDSNPDGQDLERIAQITGLSK 636
Query: 102 RVTQVWFQNSRAR 114
RVTQVWFQNSRAR
Sbjct: 637 RVTQVWFQNSRAR 649
>gi|405973461|gb|EKC38176.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 278
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/150 (78%), Positives = 131/150 (87%), Gaps = 6/150 (4%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC R I S+DWVR+AR++VYHLACFAC++CKRQLSTGEEFALH DRVLCKSH
Sbjct: 100 REFGTKCAKCYRTIQSTDWVRRARENVYHLACFACDSCKRQLSTGEEFALHGDRVLCKSH 159
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
Y+EL++GG++ DSE S KSKAKRVRTTFTE+QLQVLQANFQLDSNPDGQDLERI
Sbjct: 160 YMELLEGGSSK-----DSECSQ-KSKAKRVRTTFTEDQLQVLQANFQLDSNPDGQDLERI 213
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGK 762
AQITGLSKRVTQVWFQNSRARQKK G+
Sbjct: 214 AQITGLSKRVTQVWFQNSRARQKKQQQGGE 243
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/74 (87%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DSE S KSKAKRVRTTFTE+QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ
Sbjct: 171 DSECSQ-KSKAKRVRTTFTEDQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 229
Query: 110 NSRARQKKHLHTGK 123
NSRARQKK G+
Sbjct: 230 NSRARQKKQQQGGE 243
>gi|312385468|gb|EFR29960.1| hypothetical protein AND_00755 [Anopheles darlingi]
Length = 339
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/157 (68%), Positives = 133/157 (84%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
+ F C+KC R I+++DWVR+AR++V+HLACFAC++C RQLSTGE+FA+ EDRVLCK+
Sbjct: 128 IKKFKTSCAKCARSISATDWVRRAREYVFHLACFACDSCGRQLSTGEQFAICEDRVLCKT 187
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
HY+EL+D GTTSS+DG D++ S SK KR+RTTFTEEQ+Q+LQANFQ+DSNPDGQDLER
Sbjct: 188 HYMELIDDGTTSSEDGCDADGSGKGSKTKRIRTTFTEEQIQILQANFQIDSNPDGQDLER 247
Query: 732 IAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQN 768
IA TGLSKRVTQVWFQNSRARQKKH+H + + N
Sbjct: 248 IALATGLSKRVTQVWFQNSRARQKKHVHVPRAQDLFN 284
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 69/85 (81%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 104
S D D++ S SK KR+RTTFTEEQ+Q+LQANFQ+DSNPDGQDLERIA TGLSKRVT
Sbjct: 200 SEDGCDADGSGKGSKTKRIRTTFTEEQIQILQANFQIDSNPDGQDLERIALATGLSKRVT 259
Query: 105 QVWFQNSRARQKKHLHTGKMKSSQN 129
QVWFQNSRARQKKH+H + + N
Sbjct: 260 QVWFQNSRARQKKHVHVPRAQDLFN 284
>gi|312371799|gb|EFR19895.1| hypothetical protein AND_21633 [Anopheles darlingi]
Length = 284
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/151 (70%), Positives = 130/151 (86%), Gaps = 1/151 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R+FG KC++C R I+++DWVR+ARD ++HLACFAC++C RQLSTGE+FAL +D+VLCK+H
Sbjct: 45 RTFGTKCARCSRTISATDWVRRARDLIFHLACFACDSCGRQLSTGEQFALVDDKVLCKTH 104
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
Y E+ D GT SSDDG +++ SK KRVRTTFTEEQLQ+LQANF +DSNPDGQDLERI
Sbjct: 105 YSEMFDCGT-SSDDGCEADGYQKNSKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERI 163
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKM 763
A +TGLSKRVTQVWFQNSRARQKKH+ G+M
Sbjct: 164 ASVTGLSKRVTQVWFQNSRARQKKHVQDGEM 194
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 68/83 (81%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S D +++ SK KRVRTTFTEEQLQ+LQANF +DSNPDGQDLERIA +TGLSK
Sbjct: 112 GTSSDDGCEADGYQKNSKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSK 171
Query: 102 RVTQVWFQNSRARQKKHLHTGKM 124
RVTQVWFQNSRARQKKH+ G+M
Sbjct: 172 RVTQVWFQNSRARQKKHVQDGEM 194
>gi|312385469|gb|EFR29961.1| hypothetical protein AND_00756 [Anopheles darlingi]
Length = 344
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 113/149 (75%), Positives = 133/149 (89%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKCSKCCR IA+SDWVRKARD V+HLACF+C+ C RQLSTGE+FAL +D+V+C+SHY
Sbjct: 112 TFGAKCSKCCRTIAASDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCRSHY 171
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
++ VD G+ SSDDG S ++K+K+KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA
Sbjct: 172 MDTVDDGSNSSDDGCSSSDGYNKNKSKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIA 231
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGK 762
Q+TGLSKRVTQVWFQNSRARQKKH H +
Sbjct: 232 QLTGLSKRVTQVWFQNSRARQKKHTHVPR 260
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/69 (85%), Positives = 66/69 (95%)
Query: 55 HSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 114
++K+K+KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIAQ+TGLSKRVTQVWFQNSRAR
Sbjct: 192 YNKNKSKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRAR 251
Query: 115 QKKHLHTGK 123
QKKH H +
Sbjct: 252 QKKHTHVPR 260
>gi|157137277|ref|XP_001663968.1| arrowhead [Aedes aegypti]
gi|108869746|gb|EAT33971.1| AAEL013763-PA, partial [Aedes aegypti]
Length = 211
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/145 (74%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
+ F A C+KC R I+ SDWVR+ARD V+HLACFAC++C RQLSTGE+FA+ +DRVLCK+H
Sbjct: 68 KKFKASCAKCSRSISPSDWVRRARDFVFHLACFACDSCGRQLSTGEQFAIIDDRVLCKTH 127
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
Y+EL+D GTTSS+DG D+E +SK+K KR+RTTFTEEQ+Q+LQANFQ+DSNPDGQDLERI
Sbjct: 128 YMELIDDGTTSSEDGCDAE-GNSKNKTKRIRTTFTEEQIQILQANFQIDSNPDGQDLERI 186
Query: 733 AQITGLSKRVTQVWFQNSRARQKKH 757
A TGLSKRVTQVWFQNSRARQKKH
Sbjct: 187 ALATGLSKRVTQVWFQNSRARQKKH 211
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 104
S D D+E +SK+K KR+RTTFTEEQ+Q+LQANFQ+DSNPDGQDLERIA TGLSKRVT
Sbjct: 139 SEDGCDAEG-NSKNKTKRIRTTFTEEQIQILQANFQIDSNPDGQDLERIALATGLSKRVT 197
Query: 105 QVWFQNSRARQKKH 118
QVWFQNSRARQKKH
Sbjct: 198 QVWFQNSRARQKKH 211
>gi|322787267|gb|EFZ13403.1| hypothetical protein SINV_03010 [Solenopsis invicta]
Length = 334
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/152 (72%), Positives = 130/152 (85%), Gaps = 2/152 (1%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+A+D VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 115 TFGAKCAKCGRSVGAGDWVRRAKDRVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 174
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L++V+G TSS + DSE SK KRVRTTFTEEQL VLQANFQ+DSNPDGQDLERIA
Sbjct: 175 LDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLAVLQANFQMDSNPDGQDLERIA 234
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
Q+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 235 QVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 264
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQL 72
R T EQ +L A ++ +G S++ DSE SK KRVRTTFTEEQL
Sbjct: 153 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQL 212
Query: 73 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 126
VLQANFQ+DSNPDGQDLERIAQ+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 213 AVLQANFQMDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 264
>gi|307182932|gb|EFN69942.1| LIM/homeobox protein Awh [Camponotus floridanus]
Length = 458
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/152 (72%), Positives = 130/152 (85%), Gaps = 2/152 (1%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+A+D VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 240 TFGAKCAKCGRSMGAGDWVRRAKDRVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 299
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L++V+G TSS + DSE SK KRVRTTFTEEQL VLQANFQ+DSNPDGQDLERIA
Sbjct: 300 LDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLAVLQANFQMDSNPDGQDLERIA 359
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
Q+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 360 QVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 389
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 87/126 (69%), Gaps = 7/126 (5%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQL 72
R T EQ +L A ++ +G S++ DSE SK KRVRTTFTEEQL
Sbjct: 278 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQL 337
Query: 73 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNR-P 131
VLQANFQ+DSNPDGQDLERIAQ+TGLSKRVTQVWFQNSRARQKK H+GK+K+ + P
Sbjct: 338 AVLQANFQMDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRARQKK--HSGKIKTQMHHSP 395
Query: 132 KYGYYP 137
++P
Sbjct: 396 PMQHHP 401
>gi|345492348|ref|XP_001601137.2| PREDICTED: LIM/homeobox protein Awh-like [Nasonia vitripennis]
Length = 300
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/152 (73%), Positives = 129/152 (84%), Gaps = 2/152 (1%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGA+C+KC R I S DWVR+ARD VYHLACFAC+AC RQLSTGE+FAL + ++LCK+HY
Sbjct: 147 NFGARCAKCSRSIGSGDWVRRARDRVYHLACFACDACSRQLSTGEQFALIDAKLLCKAHY 206
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L+ V+G TSS + DSE S +K KRVRTTFTEEQL VLQANFQLDSNPDGQDLERIA
Sbjct: 207 LDAVEGNNTSSSEDCDSEHSCKGNKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIA 266
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 267 HVTGLSKRVTQVWFQNSRARQKK--HSGKIKA 296
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 83/115 (72%), Gaps = 8/115 (6%)
Query: 17 RTTFTEEQLQVLQANF-----QLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQ 71
R T EQ ++ A LD+ +G S++ DSE S +K KRVRTTFTEEQ
Sbjct: 185 RQLSTGEQFALIDAKLLCKAHYLDA-VEGNNTSSSEDCDSEHSCKGNKTKRVRTTFTEEQ 243
Query: 72 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 126
L VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 244 LSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK--HSGKIKA 296
>gi|321477982|gb|EFX88940.1| hypothetical protein DAPPUDRAFT_4176 [Daphnia pulex]
Length = 199
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 129/146 (88%), Gaps = 2/146 (1%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R+FGAKC++C R I+++DWVR+AR+HVYHLACFAC+AC+RQLSTGEEFALHE RVLCK+H
Sbjct: 56 RTFGAKCARCSRSISAADWVRRAREHVYHLACFACDACRRQLSTGEEFALHEGRVLCKTH 115
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YL+ +D G+TSSD+ D E +SK+KRVRTTFTEEQL VLQANF LDSNPDGQDLERI
Sbjct: 116 YLDGLDAGSTSSDE-TDPEGG-GRSKSKRVRTTFTEEQLHVLQANFLLDSNPDGQDLERI 173
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHL 758
A +TGLSKRVTQVWFQN RAR KKHL
Sbjct: 174 ANLTGLSKRVTQVWFQNMRARHKKHL 199
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 68/83 (81%), Gaps = 3/83 (3%)
Query: 39 DGF--GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
DG G+ S+D TD E +SK+KRVRTTFTEEQL VLQANF LDSNPDGQDLERIA +
Sbjct: 118 DGLDAGSTSSDETDPEGG-GRSKSKRVRTTFTEEQLHVLQANFLLDSNPDGQDLERIANL 176
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLSKRVTQVWFQN RAR KKHL
Sbjct: 177 TGLSKRVTQVWFQNMRARHKKHL 199
>gi|158296017|ref|XP_001237835.2| AGAP006537-PA [Anopheles gambiae str. PEST]
gi|157016310|gb|EAU76621.2| AGAP006537-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 131/148 (88%), Gaps = 1/148 (0%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
+ F C+KC R I+++DWVR+AR++V+HLACFAC++C RQLSTGE+FA+ EDRVLCK+
Sbjct: 62 IKKFKTSCAKCARSISATDWVRRAREYVFHLACFACDSCGRQLSTGEQFAICEDRVLCKT 121
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
HY+EL+D GTTSS+DG D++ + K+K KR+RTTFTEEQ+Q+LQANFQ+DSNPDGQDLER
Sbjct: 122 HYMELIDDGTTSSEDGLDAD-GNGKNKTKRIRTTFTEEQIQILQANFQVDSNPDGQDLER 180
Query: 732 IAQITGLSKRVTQVWFQNSRARQKKHLH 759
IA TGLSKRVTQVWFQNSRARQKKH+H
Sbjct: 181 IALATGLSKRVTQVWFQNSRARQKKHVH 208
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 9/85 (10%)
Query: 36 SNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 95
S+ DG AD + K+K KR+RTTFTEEQ+Q+LQANFQ+DSNPDGQDLERIA
Sbjct: 133 SSEDGLDADG---------NGKNKTKRIRTTFTEEQIQILQANFQVDSNPDGQDLERIAL 183
Query: 96 ITGLSKRVTQVWFQNSRARQKKHLH 120
TGLSKRVTQVWFQNSRARQKKH+H
Sbjct: 184 ATGLSKRVTQVWFQNSRARQKKHVH 208
>gi|328781528|ref|XP_001121397.2| PREDICTED: LIM/homeobox protein Awh [Apis mellifera]
Length = 352
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/152 (72%), Positives = 129/152 (84%), Gaps = 2/152 (1%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 133 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 192
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L++V+G TSS + DSE SK KRVRTTFTEEQL VLQANFQLDSNPDGQDLERIA
Sbjct: 193 LDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIA 252
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 253 HVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 282
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 86/126 (68%), Gaps = 7/126 (5%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQL 72
R T EQ +L A ++ +G S++ DSE SK KRVRTTFTEEQL
Sbjct: 171 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQL 230
Query: 73 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNR-P 131
VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKK H+GK+K+ + P
Sbjct: 231 SVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK--HSGKIKTQMHHSP 288
Query: 132 KYGYYP 137
++P
Sbjct: 289 PMQHHP 294
>gi|380013576|ref|XP_003690828.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 351
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/152 (72%), Positives = 129/152 (84%), Gaps = 2/152 (1%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 132 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 191
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L++V+G TSS + DSE SK KRVRTTFTEEQL VLQANFQLDSNPDGQDLERIA
Sbjct: 192 LDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIA 251
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 252 HVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 281
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 86/126 (68%), Gaps = 7/126 (5%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQL 72
R T EQ +L A ++ +G S++ DSE SK KRVRTTFTEEQL
Sbjct: 170 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQL 229
Query: 73 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNR-P 131
VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKK H+GK+K+ + P
Sbjct: 230 SVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK--HSGKIKTQMHHSP 287
Query: 132 KYGYYP 137
++P
Sbjct: 288 PMQHHP 293
>gi|383857875|ref|XP_003704429.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 358
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/152 (72%), Positives = 129/152 (84%), Gaps = 2/152 (1%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 139 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 198
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L++V+G TSS + DSE SK KRVRTTFTEEQL VLQANFQLDSNPDGQDLERIA
Sbjct: 199 LDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIA 258
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 259 HVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 288
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 86/126 (68%), Gaps = 7/126 (5%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQL 72
R T EQ +L A ++ +G S++ DSE SK KRVRTTFTEEQL
Sbjct: 177 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQL 236
Query: 73 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS-QNRP 131
VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKK H+GK+K+ + P
Sbjct: 237 SVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK--HSGKIKTQMHHSP 294
Query: 132 KYGYYP 137
++P
Sbjct: 295 PMQHHP 300
>gi|350404762|ref|XP_003487212.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 331
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/152 (72%), Positives = 129/152 (84%), Gaps = 2/152 (1%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 112 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 171
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L++V+G TSS + DSE SK KRVRTTFTEEQL VLQANFQLDSNPDGQDLERIA
Sbjct: 172 LDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIA 231
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 232 HVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 261
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 86/126 (68%), Gaps = 7/126 (5%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQL 72
R T EQ +L A ++ +G S++ DSE SK KRVRTTFTEEQL
Sbjct: 150 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQL 209
Query: 73 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNR-P 131
VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKK H+GK+K+ + P
Sbjct: 210 SVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK--HSGKIKTQMHHSP 267
Query: 132 KYGYYP 137
++P
Sbjct: 268 PMQHHP 273
>gi|340721085|ref|XP_003398956.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
Length = 329
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/152 (72%), Positives = 129/152 (84%), Gaps = 2/152 (1%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC+KC R + + DWVR+AR+ VYHLACFAC+AC RQLSTGE+FAL + R+LCK+HY
Sbjct: 110 TFGAKCAKCGRSVGAGDWVRRARERVYHLACFACDACSRQLSTGEQFALLDARLLCKAHY 169
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L++V+G TSS + DSE SK KRVRTTFTEEQL VLQANFQLDSNPDGQDLERIA
Sbjct: 170 LDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIA 229
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 230 HVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 259
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 86/126 (68%), Gaps = 7/126 (5%)
Query: 17 RTTFTEEQLQVLQANFQLDSN----PDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQL 72
R T EQ +L A ++ +G S++ DSE SK KRVRTTFTEEQL
Sbjct: 148 RQLSTGEQFALLDARLLCKAHYLDVVEGNNTSSSEDCDSEHGGKGSKTKRVRTTFTEEQL 207
Query: 73 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNR-P 131
VLQANFQLDSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKK H+GK+K+ + P
Sbjct: 208 SVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK--HSGKIKTQMHHSP 265
Query: 132 KYGYYP 137
++P
Sbjct: 266 PMQHHP 271
>gi|170034026|ref|XP_001844876.1| LIM/homeobox protein Awh [Culex quinquefasciatus]
gi|167875284|gb|EDS38667.1| LIM/homeobox protein Awh [Culex quinquefasciatus]
Length = 198
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/146 (73%), Positives = 124/146 (84%), Gaps = 1/146 (0%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKCSKC R IA SDWVRKARD V+HLACF+C+ C RQLSTGE+FAL +D+V+CK HY
Sbjct: 3 TFGAKCSKCSRSIAPSDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKIHY 62
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+ D + SSDDG S +K+K+KRVRTTFTEEQL +LQANFQ+DSNPDGQDLERIA
Sbjct: 63 QDTGDEASNSSDDGC-STDGFNKNKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIA 121
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLH 759
Q+TGLSKRVTQVWFQNSRARQKKH H
Sbjct: 122 QLTGLSKRVTQVWFQNSRARQKKHTH 147
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 69/79 (87%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
++S+D S +K+K+KRVRTTFTEEQL +LQANFQ+DSNPDGQDLERIAQ+TGLSK
Sbjct: 69 ASNSSDDGCSTDGFNKNKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSK 128
Query: 102 RVTQVWFQNSRARQKKHLH 120
RVTQVWFQNSRARQKKH H
Sbjct: 129 RVTQVWFQNSRARQKKHTH 147
>gi|170034024|ref|XP_001844875.1| arrowhead [Culex quinquefasciatus]
gi|167875283|gb|EDS38666.1| arrowhead [Culex quinquefasciatus]
Length = 257
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
+ + A C+KC R I+ SDWVR+ARD V+HLACF+C+ C RQLSTGE+FA+ +DRVLCK+
Sbjct: 62 IKKYKAACTKCSRSISPSDWVRRARDFVFHLACFSCDTCSRQLSTGEQFAIIDDRVLCKA 121
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
HY+EL+D GTTSS+DG D + + K+K KR+RTTFTEEQ+Q+LQANFQ+DSNPDGQDLER
Sbjct: 122 HYMELIDDGTTSSEDGCDVDGT-GKNKTKRIRTTFTEEQIQILQANFQIDSNPDGQDLER 180
Query: 732 IAQITGLSKRVTQVWFQNSRARQKKHLHTGK 762
IA TGLSKRVTQVWFQNSRARQKKH+ G+
Sbjct: 181 IALATGLSKRVTQVWFQNSRARQKKHVPRGQ 211
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 68/88 (77%), Gaps = 9/88 (10%)
Query: 36 SNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 95
S+ DG D T K+K KR+RTTFTEEQ+Q+LQANFQ+DSNPDGQDLERIA
Sbjct: 133 SSEDGCDVDGT---------GKNKTKRIRTTFTEEQIQILQANFQIDSNPDGQDLERIAL 183
Query: 96 ITGLSKRVTQVWFQNSRARQKKHLHTGK 123
TGLSKRVTQVWFQNSRARQKKH+ G+
Sbjct: 184 ATGLSKRVTQVWFQNSRARQKKHVPRGQ 211
>gi|157134682|ref|XP_001663345.1| arrowhead [Aedes aegypti]
gi|108870378|gb|EAT34603.1| AAEL013168-PA, partial [Aedes aegypti]
Length = 306
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/146 (71%), Positives = 128/146 (87%), Gaps = 1/146 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKC++CCR I++SDWVR+AR+ +HLACFAC++C RQLSTGE+FAL +D+VLCK+H
Sbjct: 63 KTFGAKCARCCRSISASDWVRRARELTFHLACFACDSCGRQLSTGEQFALVDDKVLCKTH 122
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
Y E+ D GT SSDDG +++ +K KRVRTTFTEEQLQ+LQANF +DSNPDGQDLERI
Sbjct: 123 YSEMFDCGT-SSDDGCEADGFQKSNKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHL 758
A +TGLSKRVTQVWFQNSRARQKKH+
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHV 207
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 85/136 (62%), Gaps = 15/136 (11%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S D +++ +K KRVRTTFTEEQLQ+LQANF +DSNPDGQDLERIA +TGLSK
Sbjct: 130 GTSSDDGCEADGFQKSNKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSK 189
Query: 102 RVTQVWFQNSRARQKKHLHTGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDL 161
RVTQVWFQNSRARQKKH+ P+ G ++ + +++S++ +
Sbjct: 190 RVTQVWFQNSRARQKKHVQV---------PRDGDMNPFSRHINLQLSYTFQQSSMMHSPI 240
Query: 162 HVQIVTEKRFLGGVIG 177
H+ V G V+G
Sbjct: 241 HMGAV------GSVVG 250
>gi|170034028|ref|XP_001844877.1| arrowhead [Culex quinquefasciatus]
gi|167875285|gb|EDS38668.1| arrowhead [Culex quinquefasciatus]
Length = 213
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/146 (73%), Positives = 124/146 (84%), Gaps = 1/146 (0%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKCSKC R IA SDWVRKARD V+HLACF+C+ C RQLSTGE+FAL +D+V+CK HY
Sbjct: 20 TFGAKCSKCSRSIAPSDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKIHY 79
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+ D + SSDDG S +K+K+KRVRTTFTEEQL +LQANFQ+DSNPDGQDLERIA
Sbjct: 80 QDTGDEASNSSDDGC-STDGFNKNKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIA 138
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLH 759
Q+TGLSKRVTQVWFQNSRARQKKH H
Sbjct: 139 QLTGLSKRVTQVWFQNSRARQKKHTH 164
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 69/79 (87%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
++S+D S +K+K+KRVRTTFTEEQL +LQANFQ+DSNPDGQDLERIAQ+TGLSK
Sbjct: 86 ASNSSDDGCSTDGFNKNKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSK 145
Query: 102 RVTQVWFQNSRARQKKHLH 120
RVTQVWFQNSRARQKKH H
Sbjct: 146 RVTQVWFQNSRARQKKHTH 164
>gi|157137279|ref|XP_001663969.1| arrowhead [Aedes aegypti]
gi|108869747|gb|EAT33972.1| AAEL013765-PA [Aedes aegypti]
Length = 201
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/148 (72%), Positives = 126/148 (85%), Gaps = 2/148 (1%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
++FGAKCSKC R IA SDWVRKARD V+HLACF+C+ C RQLSTGE+FAL +D+V+CK
Sbjct: 6 LQTFGAKCSKCSRTIAPSDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKI 65
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
HY++ D + SSDDG S +K+K+KRVRTTFTEEQL +LQANFQ+DSNPDGQDLER
Sbjct: 66 HYMDNADD-SNSSDDGC-STDGFNKNKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLER 123
Query: 732 IAQITGLSKRVTQVWFQNSRARQKKHLH 759
IAQ+TGLSKRVTQVWFQNSRARQKKH H
Sbjct: 124 IAQLTGLSKRVTQVWFQNSRARQKKHTH 151
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/78 (76%), Positives = 69/78 (88%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
++S+D S +K+K+KRVRTTFTEEQL +LQANFQ+DSNPDGQDLERIAQ+TGLSKR
Sbjct: 74 SNSSDDGCSTDGFNKNKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKR 133
Query: 103 VTQVWFQNSRARQKKHLH 120
VTQVWFQNSRARQKKH H
Sbjct: 134 VTQVWFQNSRARQKKHTH 151
>gi|260828933|ref|XP_002609417.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
gi|229294773|gb|EEN65427.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
Length = 292
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/152 (72%), Positives = 126/152 (82%), Gaps = 7/152 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+KCCR I S+DWVR+A+ HVYHLACFAC+ACKRQLSTGEEFALH+ +VLCKS
Sbjct: 105 IRQFGTKCAKCCRNIQSNDWVRRAKTHVYHLACFACDACKRQLSTGEEFALHDGKVLCKS 164
Query: 672 HYLELVDGGTTSSDDGADSESSHSKS------KAKRVRTTFTEEQLQVLQANFQLDSNPD 725
HYLE +D S +G+D +S +S + KRVRTTFTEEQL+VLQANF +DSNPD
Sbjct: 165 HYLEAMD-AAAGSGNGSDCDSLYSGESGSGGHRPKRVRTTFTEEQLRVLQANFNIDSNPD 223
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
GQDLERIAQITGLSKRVTQVWFQNSRARQKK+
Sbjct: 224 GQDLERIAQITGLSKRVTQVWFQNSRARQKKY 255
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 64/79 (81%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G+D ES + KRVRTTFTEEQL+VLQANF +DSNPDGQDLERIAQITGL
Sbjct: 177 GNGSDCDSLYSGESGSGGHRPKRVRTTFTEEQLRVLQANFNIDSNPDGQDLERIAQITGL 236
Query: 100 SKRVTQVWFQNSRARQKKH 118
SKRVTQVWFQNSRARQKK+
Sbjct: 237 SKRVTQVWFQNSRARQKKY 255
>gi|397581459|gb|EJK51937.1| hypothetical protein THAOC_28844 [Thalassiosira oceanica]
Length = 550
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/478 (30%), Positives = 226/478 (47%), Gaps = 34/478 (7%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHD--LHVQIVTEKRFLGGVIGNGDEKKNYVKE 188
P +GY+P K +L + + EE D L Q+ KR++GG IG+ D +++
Sbjct: 52 PDFGYFPAGAKCWLTVPKRMEEEVKQYLADNGLPWQVTQGKRYVGGFIGSEDALSEWIEP 111
Query: 189 KVNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTL 248
KV W +++L+ AA + PQ A++ +T+SLQCEW ++ RVV + PL + I
Sbjct: 112 KVEDWTFAIERLANAAVRYPQTAYTGLTRSLQCEWQYICRVVEGAERYLEPLEKAIREEF 171
Query: 249 VPSIF---EHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQE 305
+P++ + EI L + GGL I +PVE A + + E VLV++L
Sbjct: 172 LPALLGVDKAEIDDDLRNLIAHSVKNGGLAIPNPVEAAPLLYKSSVEASSVLVEALRSGG 231
Query: 306 QLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVI 365
LN + H +CV+ A + + + E + ++ L RI E + +L V
Sbjct: 232 SLNQKAHRECVRQASKSAKTARLATEKASLEEMKGRASRRDKKRLERIQE--TGAFLTVR 289
Query: 366 PKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDY 425
P D +L +FRDA+ LR K LP CDGCG +V HAL CK GGLV HD
Sbjct: 290 PSRRDGTELERDEFRDAVLLRMGLVPKNLPKTCDGCGATFTVEHALTCKTGGLVVMRHDD 349
Query: 426 LRDECIMMASYA-------------WNGIVKEPIMRDSSSTSPALI------------AD 460
RDE +AS A + G EP+ R ++ S D
Sbjct: 350 CRDEFGDIASKATTPSRVTTEPLIHYGG--NEPVTRQANGASNTSNNNNSSTRGGEERGD 407
Query: 461 FKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTP 520
I+G + TA D I + DAPSY Q + ++ A+ K KY A + R F P
Sbjct: 408 LAIHGFVQRSKTAILDFVITDTDAPSYGHQPSKKVLEKAAKRKKDKYLEACRERRRDFIP 467
Query: 521 LVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGT 578
+ S DG E + KR+ +L+ K + Y + +++ R SI++++S+ LRG+
Sbjct: 468 MAYSVDGLAGKEARAAEKRLTSLLASKCDRPYSEMTCFVKTRMSLSIMRSISMLLRGS 525
>gi|157128769|ref|XP_001661512.1| arrowhead [Aedes aegypti]
gi|108872464|gb|EAT36689.1| AAEL011247-PA [Aedes aegypti]
Length = 271
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/154 (70%), Positives = 129/154 (83%), Gaps = 2/154 (1%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKC R IA SDWVRKARD V+HLACF+C+ C RQLSTGE+FAL +D+V+CK H
Sbjct: 77 KTFGAKCSKCSRTIAPSDWVRKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKIH 136
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
Y++ D + SSDDG S +K+K+KRVRTTFTEEQL +LQANFQ+DSNPDGQDLERI
Sbjct: 137 YMDNADD-SNSSDDGC-STDGFNKNKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERI 194
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
AQ+TGLSKRVTQVWFQNSRARQKKH H + S+
Sbjct: 195 AQLTGLSKRVTQVWFQNSRARQKKHTHVPRDHSA 228
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 72/85 (84%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
++S+D S +K+K+KRVRTTFTEEQL +LQANFQ+DSNPDGQDLERIAQ+TGLSKR
Sbjct: 144 SNSSDDGCSTDGFNKNKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKR 203
Query: 103 VTQVWFQNSRARQKKHLHTGKMKSS 127
VTQVWFQNSRARQKKH H + S+
Sbjct: 204 VTQVWFQNSRARQKKHTHVPRDHSA 228
>gi|170034020|ref|XP_001844873.1| arrowhead [Culex quinquefasciatus]
gi|167875281|gb|EDS38664.1| arrowhead [Culex quinquefasciatus]
Length = 304
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/145 (71%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FGAKC++C R I++SDWVR+AR ++HLACFAC++C RQLSTGE+FAL +D+VLCK HY
Sbjct: 66 TFGAKCARCSRSISASDWVRRARKMIFHLACFACDSCGRQLSTGEQFALADDKVLCKKHY 125
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
E D GT SSDDG +++ +K+KRVRTTFTEEQLQ+LQANF +DSNPDGQDLERIA
Sbjct: 126 SEFFDCGT-SSDDGCEADGLQKSNKSKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIA 184
Query: 734 QITGLSKRVTQVWFQNSRARQKKHL 758
+TGLSKRVTQVWFQNSRARQKKH+
Sbjct: 185 SVTGLSKRVTQVWFQNSRARQKKHV 209
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 66/78 (84%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S D +++ +K+KRVRTTFTEEQLQ+LQANF +DSNPDGQDLERIA +TGLSK
Sbjct: 132 GTSSDDGCEADGLQKSNKSKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSK 191
Query: 102 RVTQVWFQNSRARQKKHL 119
RVTQVWFQNSRARQKKH+
Sbjct: 192 RVTQVWFQNSRARQKKHV 209
>gi|291240697|ref|XP_002740254.1| PREDICTED: LIM class homeodomain transcription factor, Lhx6/8
subclass-like [Saccoglossus kowalevskii]
Length = 283
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/149 (71%), Positives = 125/149 (83%), Gaps = 3/149 (2%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KCS+C R I S+DWVRKA++HVYHLACFAC+ CKRQLSTGEEFA+ E++VLCK+
Sbjct: 76 IRQFGTKCSRCMRNIQSNDWVRKAKNHVYHLACFACDNCKRQLSTGEEFAMQENKVLCKT 135
Query: 672 HYLELVDGGTTSSDDGADS-ESSHSK--SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
HYLEL++ + S+ ++ HS+ + KRVRTTFTEEQLQVLQANF +DSNPDGQD
Sbjct: 136 HYLELLENSSDCSETKEGMLQNGHSRHNPRTKRVRTTFTEEQLQVLQANFNVDSNPDGQD 195
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKKH 757
LERIAQITGLSKRVTQVWFQNSRARQKKH
Sbjct: 196 LERIAQITGLSKRVTQVWFQNSRARQKKH 224
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 63/69 (91%), Gaps = 2/69 (2%)
Query: 52 ESSHSK--SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
++ HS+ + KRVRTTFTEEQLQVLQANF +DSNPDGQDLERIAQITGLSKRVTQVWFQ
Sbjct: 156 QNGHSRHNPRTKRVRTTFTEEQLQVLQANFNVDSNPDGQDLERIAQITGLSKRVTQVWFQ 215
Query: 110 NSRARQKKH 118
NSRARQKKH
Sbjct: 216 NSRARQKKH 224
>gi|158296021|ref|XP_316578.4| AGAP006540-PA [Anopheles gambiae str. PEST]
gi|157016312|gb|EAA11207.4| AGAP006540-PA [Anopheles gambiae str. PEST]
Length = 334
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/146 (69%), Positives = 126/146 (86%), Gaps = 1/146 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
+ FG KC++C R I+++DWVR+ARD ++HLACFAC++C RQLSTGE+FAL +D+VLCK+H
Sbjct: 78 KRFGTKCARCSRTISATDWVRRARDLIFHLACFACDSCGRQLSTGEQFALVDDKVLCKTH 137
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
Y E+ D GT SSDDG +++ +K KRVRTTFTEEQLQ+LQANF +DSNPDGQDLERI
Sbjct: 138 YSEMFDCGT-SSDDGCEADGYQKNNKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERI 196
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHL 758
A +TGLSKRVTQVWFQNSRARQKKH+
Sbjct: 197 ASVTGLSKRVTQVWFQNSRARQKKHV 222
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 65/78 (83%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S D +++ +K KRVRTTFTEEQLQ+LQANF +DSNPDGQDLERIA +TGLSK
Sbjct: 145 GTSSDDGCEADGYQKNNKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSK 204
Query: 102 RVTQVWFQNSRARQKKHL 119
RVTQVWFQNSRARQKKH+
Sbjct: 205 RVTQVWFQNSRARQKKHV 222
>gi|390356846|ref|XP_785118.3| PREDICTED: LIM/homeobox protein Awh-like [Strongylocentrotus
purpuratus]
Length = 335
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/160 (68%), Positives = 128/160 (80%), Gaps = 7/160 (4%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C R I +SDWVR+AR+++YHLACFAC+ CKRQLSTGEEFA+ E+RVLCKSH
Sbjct: 93 REFGTKCARCLRNIDASDWVRRARENIYHLACFACDNCKRQLSTGEEFAMIENRVLCKSH 152
Query: 673 YLELVDGGTTSSDD-------GADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
YLELV+ S+ D G S S + K KR+RTTFTEEQL+VLQANF +DSNPD
Sbjct: 153 YLELVEATCRSNGDGSGSEYGGEGSGSERPQQKTKRIRTTFTEEQLEVLQANFNVDSNPD 212
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
GQDLERIAQITGLSKRVTQVWFQNSRARQKKH + M++
Sbjct: 213 GQDLERIAQITGLSKRVTQVWFQNSRARQKKHSNPHGMET 252
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/68 (82%), Positives = 62/68 (91%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
K KR+RTTFTEEQL+VLQANF +DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH
Sbjct: 185 KTKRIRTTFTEEQLEVLQANFNVDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 244
Query: 119 LHTGKMKS 126
+ M++
Sbjct: 245 SNPHGMET 252
>gi|340386000|ref|XP_003391496.1| PREDICTED: hypothetical protein LOC100639384, partial [Amphimedon
queenslandica]
Length = 894
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 167/302 (55%), Gaps = 1/302 (0%)
Query: 127 SQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGDEKKNYV 186
S P +GY+PEP KS+L++K + A+ LF D V +VT +RFLGGVIG+ E+ +V
Sbjct: 586 STTGPLFGYHPEPRKSYLIVKEATFDHATALFEDYGVNVVTSRRFLGGVIGSTTERDLFV 645
Query: 187 KEKVNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHS 246
KV +W V+ L+ A PQAA+ +TKSLQCEW FLQRV+ C + + + S
Sbjct: 646 SHKVEEWSHTVELLASIAIHQPQAAYVALTKSLQCEWTFLQRVIPPCSHLFQAIENSLSS 705
Query: 247 TLVPSIFEHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQ 306
+ +P++ HE S + ++ LPT+ GGL I P + A+ + +L D++
Sbjct: 706 SFIPNLLGHECSKLDRLVYSLPTKLGGLNIPLPTLSTTLAYESSLAATSILSDAIKGSIT 765
Query: 307 LNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIP 366
+L +H V + + K + + I+ P +R + R + S WLN +P
Sbjct: 766 FSLSDHEGQVLQSRSDFSKLKLSAHDNTLSHIIDMADPIYKRAILRNCKSLPS-WLNALP 824
Query: 367 KSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYL 426
++FDLS +FRDAL LRY L PT CDGC + +HAL+C++GGLV H+ +
Sbjct: 825 IQQEHFDLSANEFRDALCLRYLKPLLNTPTNCDGCNAPFTTSHALDCRRGGLVVQRHNEI 884
Query: 427 RD 428
RD
Sbjct: 885 RD 886
>gi|156405016|ref|XP_001640528.1| predicted protein [Nematostella vectensis]
gi|156227663|gb|EDO48465.1| predicted protein [Nematostella vectensis]
Length = 884
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 226/463 (48%), Gaps = 32/463 (6%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKR-FLGGVIGNGDEKKNYVKEK 189
P GY+P K +LV KP+ E A +F + I TE R LG +G+ + YV K
Sbjct: 417 PDLGYFPNAVKCWLVTKPEKEESARKIFEGTGINITTEGRKHLGAALGSRPHLEQYVDSK 476
Query: 190 VNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLV 249
V++W+ V KL+ A PQA+++ T L+ W + R + +D +PL I TL+
Sbjct: 477 VDEWVGQVTKLALFAVSQPQASYAAYTFGLKHRWTYFLRTLPDIEDLLLPLERAISDTLI 536
Query: 250 PSIFEHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQLNL 309
PS+ + +E +L L P + A F +++ C L EQ+
Sbjct: 537 PSLTGRTCTQAERDLLAL-----------PADEASLEFTASTKVCGPLA------EQIKQ 579
Query: 310 QEHNQCVKNAI---NTELVRKETEY-QEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVI 365
Q H +A+ E R++ EY + + + SSL R + + +S WL V+
Sbjct: 580 QTHELPCDDAVQEAQQEARREKNEYLKSRCAEVKSSLHVNMLRAVDLATQKGASSWLTVL 639
Query: 366 PKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDY 425
P +FD+ +F+DAL LRY+ + P+ C CG HA+ CK+GG V H+
Sbjct: 640 PLREMSFDIKKREFKDALGLRYDWEIPETPSIC-VCGDTFDADHAMICKRGGFVIQHHNE 698
Query: 426 LRDECIMMASYAWNGIVKEPIMRD--------SSSTSPALIADFKINGVWEAGGTAFFDN 477
LRD + S + +P+++D + + D G WE AFFD
Sbjct: 699 LRDLEAKLLSLVCKDMQTDPVLQDITGEELNRGAKAARDARLDIVAIGFWERQRQAFFDV 758
Query: 478 RIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDL-RASFTPLVCSTDGALHLEFHSF 536
R+ +A+A S+ + I ++H EK +Y T ++ RA+FTPLV + G + E F
Sbjct: 759 RVCHANAESFRDMNIDQIFRQHETEKKRQYATRVLEVDRATFTPLVFGSAGGMASECQQF 818
Query: 537 LKRIALVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTR 579
R+A +++EK +++Y +SW+R + F+IL++ L LRG+R
Sbjct: 819 HSRLAELIAEKKEELYSTTVSWIRAKVSFAILRSALLCLRGSR 861
>gi|339236177|ref|XP_003379643.1| LIM/homeobox protein Awh [Trichinella spiralis]
gi|316977684|gb|EFV60755.1| LIM/homeobox protein Awh [Trichinella spiralis]
Length = 902
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/148 (68%), Positives = 119/148 (80%), Gaps = 10/148 (6%)
Query: 610 ICF-RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL 668
+C+ R F KC +C + I S+ WVR+AR +VYHLACFAC++C+RQLSTGEEFAL + RVL
Sbjct: 674 MCYQRQFSVKCDRCNQVIQSNHWVRRARQYVYHLACFACDSCQRQLSTGEEFALQDSRVL 733
Query: 669 CKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
CK HY+EL++G D+ H K K KRVRTTFTEEQLQ+LQANFQ+DSNPDGQD
Sbjct: 734 CKQHYMELLEG---------DNGKVHHKQKTKRVRTTFTEEQLQILQANFQIDSNPDGQD 784
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
LERIAQ TGLSKRVTQVWFQNSRARQKK
Sbjct: 785 LERIAQGTGLSKRVTQVWFQNSRARQKK 812
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 68/82 (82%), Gaps = 1/82 (1%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
D+ H K K KRVRTTFTEEQLQ+LQANFQ+DSNPDGQDLERIAQ TGLSKRVTQVWFQ
Sbjct: 745 DNGKVHHKQKTKRVRTTFTEEQLQILQANFQIDSNPDGQDLERIAQGTGLSKRVTQVWFQ 804
Query: 110 NSRARQKKHLHTGKMKSSQNRP 131
NSRARQKK K+KS+ + P
Sbjct: 805 NSRARQKK-CQGVKVKSNSSHP 825
>gi|402590254|gb|EJW84185.1| LIM/homeobox protein Awh [Wuchereria bancrofti]
Length = 200
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/156 (66%), Positives = 121/156 (77%), Gaps = 11/156 (7%)
Query: 611 CFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
CFR FG KCS C R I ++DWVR+AR+ VYHLACFAC+ CKRQLSTGEEFAL + R+LCK
Sbjct: 3 CFRRFGTKCSSCQRLIHATDWVRRARNFVYHLACFACDQCKRQLSTGEEFALQDCRLLCK 62
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
HY+EL++G E K+KAKRVRTTF EEQL VLQ +FQ+DSNPDG DLE
Sbjct: 63 QHYMELIEG-----------ECGQQKAKAKRVRTTFAEEQLAVLQTHFQIDSNPDGADLE 111
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
RIA +TGLSKRVTQVWFQNSRARQKK+ + K ++S
Sbjct: 112 RIATMTGLSKRVTQVWFQNSRARQKKYQGSKKNRTS 147
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 64/78 (82%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
+ E K+KAKRVRTTF EEQL VLQ +FQ+DSNPDG DLERIA +TGLSKRVTQVWFQ
Sbjct: 70 EGECGQQKAKAKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQVWFQ 129
Query: 110 NSRARQKKHLHTGKMKSS 127
NSRARQKK+ + K ++S
Sbjct: 130 NSRARQKKYQGSKKNRTS 147
>gi|397563340|gb|EJK43760.1| hypothetical protein THAOC_37765, partial [Thalassiosira oceanica]
Length = 1194
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 208/448 (46%), Gaps = 34/448 (7%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHD--LHVQIVTEKRFLGGVIGNGDEKKNYVKE 188
P +GY+P K +L + + EE D L Q+ KR++GG IG+ D +++
Sbjct: 750 PDFGYFPAGAKCWLTVPKRMEEEVKQYLADNGLPWQVTQGKRYVGGFIGSEDALSEWIEP 809
Query: 189 KVNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTL 248
KV W +++L+ AA + PQ A++ +T+SLQCEW ++ RVV + PL + I
Sbjct: 810 KVEDWTFAIERLANAAVRYPQTAYTGLTRSLQCEWQYICRVVEGAERYLEPLEKAIREEF 869
Query: 249 VPSIF---EHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQE 305
+P++ + EI L + GGL I +PVE A + + E VLV++L
Sbjct: 870 LPALLGVDKAEIDDDLRNLIAHSVKNGGLAIPNPVEAAPLLYKSSVEASSVLVEALRSGG 929
Query: 306 QLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVI 365
LN + H +CV+ A + + + E + ++ L RI E + +L V
Sbjct: 930 SLNQKAHRECVRQASKSAKTARLATEKASLEEMKGRASRRDKKRLERIQE--TGAFLTVR 987
Query: 366 PKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDY 425
P D +L +FRDA+ LR K LP CDGCG +V HAL CK GGLV HD
Sbjct: 988 PSRRDGTELERDEFRDAVLLRMGLVPKNLPKTCDGCGATFTVEHALTCKTGGLVVMRHDD 1047
Query: 426 LRDECIMMASYA-------------WNGIVKEPIMRDSSSTSPALI------------AD 460
RDE +AS A + G EP+ R ++ S D
Sbjct: 1048 CRDEFGDIASKATTPSRVTTEPLIHYGG--NEPVTRQANGASNTSNNNNSSTRGGEERGD 1105
Query: 461 FKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTP 520
I+G + TA D I + DAPSY Q + ++ A+ K KY A + R F P
Sbjct: 1106 LAIHGFVQRSKTAILDFVITDTDAPSYGHQPSKKVLEKAAKRKKDKYLEACRERRRDFIP 1165
Query: 521 LVCSTDGALHLEFHSFLKRIALVLSEKW 548
+ S DG E + KR+ +L+ KW
Sbjct: 1166 MAYSVDGLAGKEARAAEKRLTSLLASKW 1193
>gi|156364672|ref|XP_001626470.1| predicted protein [Nematostella vectensis]
gi|156213347|gb|EDO34370.1| predicted protein [Nematostella vectensis]
Length = 304
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/156 (66%), Positives = 121/156 (77%), Gaps = 11/156 (7%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C R I ++DWVR+A++ VYHLACFAC+ CKRQLSTGEEFAL + VLCK H
Sbjct: 83 RQFGTKCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKLH 142
Query: 673 YLELVDGGTTSSD---------DGADSESS--HSKSKAKRVRTTFTEEQLQVLQANFQLD 721
YLE +D D DG DS +S + KAKRVRTTFTE+QLQ+LQANF +D
Sbjct: 143 YLEALDTSPAERDYQEVFSPDVDGDDSPNSLKSGRHKAKRVRTTFTEDQLQILQANFNID 202
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
SNPDGQDLERIAQ+TGLSKRVTQVWFQNSRARQKK+
Sbjct: 203 SNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKKY 238
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 71/88 (80%), Gaps = 4/88 (4%)
Query: 31 NFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 90
++Q +PD G DS + S + KAKRVRTTFTE+QLQ+LQANF +DSNPDGQDL
Sbjct: 155 DYQEVFSPDVDGDDSPNSLKS----GRHKAKRVRTTFTEDQLQILQANFNIDSNPDGQDL 210
Query: 91 ERIAQITGLSKRVTQVWFQNSRARQKKH 118
ERIAQ+TGLSKRVTQVWFQNSRARQKK+
Sbjct: 211 ERIAQLTGLSKRVTQVWFQNSRARQKKY 238
>gi|170577993|ref|XP_001894217.1| Homeobox domain containing protein [Brugia malayi]
gi|158599257|gb|EDP36927.1| Homeobox domain containing protein [Brugia malayi]
Length = 452
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/154 (64%), Positives = 117/154 (75%), Gaps = 11/154 (7%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KCS C R I ++DWVR+AR+ VYHLACFAC+ CKRQLSTGEEFAL + R+LCK HY+
Sbjct: 258 FGTKCSSCQRLIHATDWVRRARNFVYHLACFACDQCKRQLSTGEEFALQDCRLLCKQHYM 317
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
EL++G E K+K KRVRTTF EEQL VLQ +FQ+DSNPDG DLERIA
Sbjct: 318 ELIEG-----------ECGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIAT 366
Query: 735 ITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQN 768
+TGLSKRVTQVWFQNSRARQKK+ + K + S N
Sbjct: 367 MTGLSKRVTQVWFQNSRARQKKYQGSKKNRISHN 400
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 63/80 (78%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
+ E K+K KRVRTTF EEQL VLQ +FQ+DSNPDG DLERIA +TGLSKRVTQVWFQ
Sbjct: 321 EGECGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQVWFQ 380
Query: 110 NSRARQKKHLHTGKMKSSQN 129
NSRARQKK+ + K + S N
Sbjct: 381 NSRARQKKYQGSKKNRISHN 400
>gi|324511084|gb|ADY44626.1| LIM/homeobox protein Awh [Ascaris suum]
Length = 384
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/153 (66%), Positives = 116/153 (75%), Gaps = 12/153 (7%)
Query: 611 CF-RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLC 669
C+ R FG KCS C R I +DWVR+AR VYHLACFAC+ CKRQLSTGEEFAL + R+LC
Sbjct: 171 CYNRQFGTKCSSCRRLIQPTDWVRRARSFVYHLACFACDQCKRQLSTGEEFALQDCRLLC 230
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K HY+ELV+G E+ K+K KRVRTTF EEQL VLQ +FQ+DSNPDG DL
Sbjct: 231 KQHYVELVEG-----------ETGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADL 279
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 762
ERIA +TGLSKRVTQVWFQNSRARQKK+ T K
Sbjct: 280 ERIATMTGLSKRVTQVWFQNSRARQKKYQGTKK 312
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 61/74 (82%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
+ E+ K+K KRVRTTF EEQL VLQ +FQ+DSNPDG DLERIA +TGLSKRVTQVWFQ
Sbjct: 239 EGETGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQVWFQ 298
Query: 110 NSRARQKKHLHTGK 123
NSRARQKK+ T K
Sbjct: 299 NSRARQKKYQGTKK 312
>gi|393905176|gb|EFO23802.2| hypothetical protein LOAG_04687 [Loa loa]
Length = 205
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 116/154 (75%), Gaps = 11/154 (7%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KCS C R I ++DWVR+AR+ VYHLACFAC+ CKRQLSTGEEFAL + R+LCK HY+
Sbjct: 11 FGTKCSSCQRLIHATDWVRRARNFVYHLACFACDQCKRQLSTGEEFALQDCRLLCKQHYM 70
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
EL++G E K+K KRVRTTF EEQL VLQ +FQ+DSNPDG DLERIA
Sbjct: 71 ELIEG-----------ECGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIAT 119
Query: 735 ITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQN 768
+TGLSKRVTQVWFQNSRARQKK+ K ++ N
Sbjct: 120 MTGLSKRVTQVWFQNSRARQKKYQGNKKNRTGHN 153
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
+ E K+K KRVRTTF EEQL VLQ +FQ+DSNPDG DLERIA +TGLSKRVTQVWFQ
Sbjct: 74 EGECGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQVWFQ 133
Query: 110 NSRARQKKHLHTGKMKSSQN 129
NSRARQKK+ K ++ N
Sbjct: 134 NSRARQKKYQGNKKNRTGHN 153
>gi|225709660|gb|ACO10676.1| LIM/homeobox protein Awh [Caligus rogercresseyi]
Length = 274
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/157 (66%), Positives = 126/157 (80%), Gaps = 3/157 (1%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R+FG+KC KC R I+ SDWVRKAR+ +YHLACF+C+ CKRQLSTGEEF + EDRVLCK H
Sbjct: 80 RAFGSKCFKCSRNISPSDWVRKAREQIYHLACFSCDGCKRQLSTGEEFGIFEDRVLCKCH 139
Query: 673 YLELVDG---GTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
+LEL DG + S + +++ SK K+KR+RTTFTE+Q+Q+LQANF +DSNPDGQDL
Sbjct: 140 FLELRDGILSSSDESGESSETGGGGSKKKSKRMRTTFTEDQIQILQANFHIDSNPDGQDL 199
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
ERIA ITGLSKRVTQVWFQN RARQKK + +KSS
Sbjct: 200 ERIAGITGLSKRVTQVWFQNCRARQKKFVGKRSIKSS 236
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R+RTTFTE+Q+Q+LQANF +DSNPDGQDLERIA ITGLSKRVTQVWFQN RARQKK +
Sbjct: 171 RMRTTFTEDQIQILQANFHIDSNPDGQDLERIAGITGLSKRVTQVWFQNCRARQKKFVGK 230
Query: 122 GKMKSSQNRPK--------YGYYPEPNKS 142
+KSS + P Y Y P+ S
Sbjct: 231 RSIKSSLDEPPQMDLQLNMYPSYRSPSDS 259
>gi|308512521|ref|XP_003118443.1| CRE-LIM-4 protein [Caenorhabditis remanei]
gi|308239089|gb|EFO83041.1| CRE-LIM-4 protein [Caenorhabditis remanei]
Length = 355
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 110/144 (76%), Gaps = 9/144 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+ C R I S+DWVR+AR++VYHLACFAC CKRQLSTGEE+AL E +LCK H
Sbjct: 162 REFGPKCASCERLIQSTDWVRRARNYVYHLACFACNQCKRQLSTGEEYALQEGNLLCKQH 221
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+LELV+G DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+I
Sbjct: 222 FLELVEG---------DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 272
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
A +TGLSKRVTQVWFQNSRARQKK
Sbjct: 273 ATMTGLSKRVTQVWFQNSRARQKK 296
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 55/68 (80%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+IA +TGLSKRVTQVWFQ
Sbjct: 229 DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIATMTGLSKRVTQVWFQ 288
Query: 110 NSRARQKK 117
NSRARQKK
Sbjct: 289 NSRARQKK 296
>gi|258504160|gb|ACV72774.1| LIM-4 [Caenorhabditis remanei]
gi|258504162|gb|ACV72775.1| LIM-4 [Caenorhabditis remanei]
gi|258504164|gb|ACV72776.1| LIM-4 [Caenorhabditis remanei]
gi|258504184|gb|ACV72786.1| LIM-4 [Caenorhabditis remanei]
gi|258504186|gb|ACV72787.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 110/144 (76%), Gaps = 9/144 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+ C R I S+DWVR+AR++VYHLACFAC CKRQLSTGEE+AL E +LCK H
Sbjct: 132 REFGPKCASCERLIQSTDWVRRARNYVYHLACFACNQCKRQLSTGEEYALQEGNLLCKQH 191
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+LELV+G DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+I
Sbjct: 192 FLELVEG---------DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 242
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
A +TGLSKRVTQVWFQNSRARQKK
Sbjct: 243 ATMTGLSKRVTQVWFQNSRARQKK 266
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 55/68 (80%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+IA +TGLSKRVTQVWFQ
Sbjct: 199 DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIATMTGLSKRVTQVWFQ 258
Query: 110 NSRARQKK 117
NSRARQKK
Sbjct: 259 NSRARQKK 266
>gi|258504166|gb|ACV72777.1| LIM-4 [Caenorhabditis remanei]
gi|258504168|gb|ACV72778.1| LIM-4 [Caenorhabditis remanei]
gi|258504170|gb|ACV72779.1| LIM-4 [Caenorhabditis remanei]
gi|258504174|gb|ACV72781.1| LIM-4 [Caenorhabditis remanei]
gi|258504176|gb|ACV72782.1| LIM-4 [Caenorhabditis remanei]
gi|258504178|gb|ACV72783.1| LIM-4 [Caenorhabditis remanei]
gi|258504180|gb|ACV72784.1| LIM-4 [Caenorhabditis remanei]
gi|258504182|gb|ACV72785.1| LIM-4 [Caenorhabditis remanei]
gi|258504188|gb|ACV72788.1| LIM-4 [Caenorhabditis remanei]
gi|258504190|gb|ACV72789.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 110/144 (76%), Gaps = 9/144 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+ C R I S+DWVR+AR++VYHLACFAC CKRQLSTGEE+AL E +LCK H
Sbjct: 132 REFGPKCASCERLIQSTDWVRRARNYVYHLACFACNQCKRQLSTGEEYALQEGNLLCKQH 191
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+LELV+G DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+I
Sbjct: 192 FLELVEG---------DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 242
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
A +TGLSKRVTQVWFQNSRARQKK
Sbjct: 243 ATMTGLSKRVTQVWFQNSRARQKK 266
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 55/68 (80%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+IA +TGLSKRVTQVWFQ
Sbjct: 199 DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIATMTGLSKRVTQVWFQ 258
Query: 110 NSRARQKK 117
NSRARQKK
Sbjct: 259 NSRARQKK 266
>gi|17568917|ref|NP_508669.1| Protein LIM-4 [Caenorhabditis elegans]
gi|1621631|gb|AAB17273.1| putative transcription factor LIM-4 [Caenorhabditis elegans]
gi|351063300|emb|CCD71434.1| Protein LIM-4 [Caenorhabditis elegans]
Length = 355
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 109/144 (75%), Gaps = 9/144 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R G KC+ C R I ++DWVR+AR++VYHLACF+C CKRQLSTGEE+AL E +LCK H
Sbjct: 162 RELGPKCASCDRTIQATDWVRRARNYVYHLACFSCNQCKRQLSTGEEYALQEGNLLCKQH 221
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+LELV+G DS S K+K KRVRTTF E+QL VLQ F DSNPDG DLE+I
Sbjct: 222 FLELVEG---------DSGVSSQKAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKI 272
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
A +TGLSKRVTQVWFQNSRARQKK
Sbjct: 273 ASMTGLSKRVTQVWFQNSRARQKK 296
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 55/68 (80%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DS S K+K KRVRTTF E+QL VLQ F DSNPDG DLE+IA +TGLSKRVTQVWFQ
Sbjct: 229 DSGVSSQKAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQVWFQ 288
Query: 110 NSRARQKK 117
NSRARQKK
Sbjct: 289 NSRARQKK 296
>gi|258504172|gb|ACV72780.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 195 bits (496), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 109/144 (75%), Gaps = 9/144 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+ C R I S+DWVR+AR +VYHLACFAC CKRQLSTGEE+AL E +LCK H
Sbjct: 132 REFGPKCASCERLIQSTDWVRRARSYVYHLACFACNQCKRQLSTGEEYALQEGNLLCKQH 191
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+LELV+G DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+I
Sbjct: 192 FLELVEG---------DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 242
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
A +TGLSKRVTQVWFQNSRARQKK
Sbjct: 243 ATMTGLSKRVTQVWFQNSRARQKK 266
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 55/68 (80%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+IA +TGLSKRVTQVWFQ
Sbjct: 199 DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIATMTGLSKRVTQVWFQ 258
Query: 110 NSRARQKK 117
NSRARQKK
Sbjct: 259 NSRARQKK 266
>gi|405976917|gb|EKC41395.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 280
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 115/143 (80%), Gaps = 6/143 (4%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KCSKC R I ++DWVR+AR++VYHLACFAC++C+RQLSTGEEFAL D++LC HY
Sbjct: 109 FGTKCSKCYRKIQATDWVRRARENVYHLACFACDSCQRQLSTGEEFALSGDQLLCLRHYT 168
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
LV+G D DSE S SK KAKRVR++FTEEQLQ+LQANF+++SNPD Q+L RIA
Sbjct: 169 SLVEG-----DTDKDSELS-SKPKAKRVRSSFTEEQLQILQANFRIESNPDSQELNRIAI 222
Query: 735 ITGLSKRVTQVWFQNSRARQKKH 757
G+S+RV QVWFQN+RARQKK
Sbjct: 223 TAGVSRRVAQVWFQNARARQKKQ 245
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DSE S SK KAKRVR++FTEEQLQ+LQANF+++SNPD Q+L RIA G+S+RV QVWFQ
Sbjct: 178 DSELS-SKPKAKRVRSSFTEEQLQILQANFRIESNPDSQELNRIAITAGVSRRVAQVWFQ 236
Query: 110 NSRARQKKH 118
N+RARQKK
Sbjct: 237 NARARQKKQ 245
>gi|268578911|ref|XP_002644438.1| C. briggsae CBR-LIM-4 protein [Caenorhabditis briggsae]
Length = 346
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 107/141 (75%), Gaps = 9/141 (6%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLE 675
G C+ C R I ++DWVR+AR+ VYHLACFAC CKRQLSTGEE++L E+ +LCK HYLE
Sbjct: 157 GPDCASCGRKIGAADWVRRARNFVYHLACFACNQCKRQLSTGEEYSLQEEHLLCKQHYLE 216
Query: 676 LVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
LV+G DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+IA +
Sbjct: 217 LVEG---------DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIANM 267
Query: 736 TGLSKRVTQVWFQNSRARQKK 756
TGLSKRVTQVWFQNSRARQKK
Sbjct: 268 TGLSKRVTQVWFQNSRARQKK 288
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 55/68 (80%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DS S K+K KRVRTTF ++QL VLQ F DSNPDG DLE+IA +TGLSKRVTQVWFQ
Sbjct: 221 DSGVSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKIANMTGLSKRVTQVWFQ 280
Query: 110 NSRARQKK 117
NSRARQKK
Sbjct: 281 NSRARQKK 288
>gi|410978997|ref|XP_003995873.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Felis catus]
Length = 404
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 276 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 308
>gi|395824117|ref|XP_003785317.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Otolemur garnettii]
Length = 377
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|334191689|ref|NP_001229262.1| LIM/homeobox protein Lhx6 isoform 3 [Homo sapiens]
gi|221041678|dbj|BAH12516.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 276 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 308
>gi|134284361|ref|NP_954629.2| LIM/homeobox protein Lhx6 isoform 2 [Homo sapiens]
gi|297685272|ref|XP_002820219.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pongo abelii]
Length = 377
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|297270224|ref|XP_001088818.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Macaca mulatta]
Length = 377
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|395824119|ref|XP_003785318.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Otolemur garnettii]
Length = 366
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 276 LSRRVIQVWFQNCRARHKKH 295
>gi|297270226|ref|XP_002800034.1| PREDICTED: LIM/homeobox protein Lhx6 [Macaca mulatta]
Length = 366
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 276 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 308
>gi|390458309|ref|XP_003732088.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Callithrix jacchus]
Length = 348
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|5738960|dbj|BAA83423.1| LIM-homeodomain (LHX) protein 6.1b [Homo sapiens]
Length = 348
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|297685274|ref|XP_002820220.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Pongo abelii]
Length = 366
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 276 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 308
>gi|74355622|gb|AAI03937.1| LIM homeobox 6 [Homo sapiens]
gi|119607921|gb|EAW87515.1| LIM homeobox 6, isoform CRA_a [Homo sapiens]
Length = 348
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|344271985|ref|XP_003407817.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Loxodonta africana]
Length = 366
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 276 LSRRVIQVWFQNCRARHKKH 295
>gi|133893073|ref|NP_001076594.1| LIM/homeobox protein Lhx6 isoform 2 [Mus musculus]
Length = 377
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|410043125|ref|XP_003951564.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan troglodytes]
Length = 366
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 276 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 308
>gi|148676721|gb|EDL08668.1| LIM homeobox protein 6, isoform CRA_b [Mus musculus]
Length = 380
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 156 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 215
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 216 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 275
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 276 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 309
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 230 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 289
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 290 LSRRVIQVWFQNCRARHKKH 309
>gi|410043123|ref|XP_003312314.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Pan troglodytes]
Length = 348
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|354500653|ref|XP_003512413.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Cricetulus griseus]
Length = 377
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|344271983|ref|XP_003407816.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Loxodonta africana]
Length = 377
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 287 LSRRVIQVWFQNCRARHKKH 306
>gi|133892051|ref|NP_001076596.1| LIM/homeobox protein Lhx6 isoform 4 [Mus musculus]
gi|148676720|gb|EDL08667.1| LIM homeobox protein 6, isoform CRA_a [Mus musculus]
Length = 348
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 258 LSRRVIQVWFQNCRARHKKH 277
>gi|390458313|ref|XP_003732090.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 4 [Callithrix jacchus]
Length = 366
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 276 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 308
>gi|363740595|ref|XP_001235421.2| PREDICTED: LIM/homeobox protein Lhx6 [Gallus gallus]
Length = 562
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 108/153 (70%), Gaps = 8/153 (5%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+ H
Sbjct: 324 RRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIH 383
Query: 673 YLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 724
Y +++ ++++G SE AKR RT+FT EQLQV+QA F D+NP
Sbjct: 384 YDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNP 443
Query: 725 DGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
D Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 444 DAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 476
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 397 NGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 456
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 457 LSRRVIQVWFQNCRARHKKH 476
>gi|354500655|ref|XP_003512414.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Cricetulus griseus]
Length = 366
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 276 LSRRVIQVWFQNCRARHKKH 295
>gi|403266045|ref|XP_003925208.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 276 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 308
>gi|410904301|ref|XP_003965630.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 373
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 109/160 (68%), Gaps = 10/160 (6%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 149 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRI 208
Query: 672 HYLELVD--------GGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +V+ G + + +E AKR RT+FT EQLQ++QA F D+N
Sbjct: 209 HYDTMVENLKRAAESGNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNN 268
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL--HTG 761
PD Q L+++A +TGLS+RV QVWFQN RAR KKH H+G
Sbjct: 269 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHSG 308
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G +E AKR RT+FT EQLQ++QA F D+NPD Q L+++A +TGL
Sbjct: 224 GNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDAQTLQKLADMTGL 283
Query: 100 SKRVTQVWFQNSRARQKKHL--HTG 122
S+RV QVWFQN RAR KKH H+G
Sbjct: 284 SRRVIQVWFQNCRARHKKHTPQHSG 308
>gi|149038911|gb|EDL93131.1| LIM homeobox protein 6 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 373
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 149 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 208
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 209 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 268
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 269 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 302
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 223 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 282
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 283 LSRRVIQVWFQNCRARHKKH 302
>gi|148676722|gb|EDL08669.1| LIM homeobox protein 6, isoform CRA_c [Mus musculus]
Length = 395
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 156 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 215
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 216 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 275
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 276 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 309
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 230 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 289
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 290 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 322
>gi|296482369|tpg|DAA24484.1| TPA: LIM homeobox 6 isoform 2 [Bos taurus]
Length = 377
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 57/93 (61%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S +P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAQP 319
>gi|402896489|ref|XP_003911330.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6 [Papio
anubis]
Length = 390
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 287 LSRRVIQVWFQNCRARHKKH 306
>gi|5738958|dbj|BAA83422.1| LIM-homeodomain (LHX) protein 6.1a [Homo sapiens]
Length = 363
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 258 LSRRVIQVWFQNCRARHKKH 277
>gi|449478466|ref|XP_002188127.2| PREDICTED: LIM/homeobox protein Lhx6 [Taeniopygia guttata]
Length = 421
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 182 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 241
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 242 HYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 301
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 302 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 335
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 256 NGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 315
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 316 LSRRVIQVWFQNCRARHKKH 335
>gi|167773589|gb|ABZ92229.1| LIM homeobox 6 [synthetic construct]
Length = 363
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|345806125|ref|XP_003435390.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Canis lupus
familiaris]
Length = 392
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|133891794|ref|NP_032526.2| LIM/homeobox protein Lhx6 isoform 1 [Mus musculus]
Length = 392
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|334191691|ref|NP_001229263.1| LIM/homeobox protein Lhx6 isoform 4 [Homo sapiens]
gi|90185239|sp|Q9UPM6.2|LHX6_HUMAN RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|7018428|emb|CAB66505.1| hypothetical protein [Homo sapiens]
gi|74353529|gb|AAI03938.1| LIM homeobox 6 [Homo sapiens]
gi|117646920|emb|CAL37575.1| hypothetical protein [synthetic construct]
gi|119607922|gb|EAW87516.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|119607923|gb|EAW87517.1| LIM homeobox 6, isoform CRA_b [Homo sapiens]
gi|158260677|dbj|BAF82516.1| unnamed protein product [Homo sapiens]
gi|189054037|dbj|BAG36544.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|395824115|ref|XP_003785316.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Otolemur garnettii]
Length = 392
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|354500651|ref|XP_003512412.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Cricetulus griseus]
Length = 392
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|410978995|ref|XP_003995872.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Felis catus]
Length = 363
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 258 LSRRVIQVWFQNCRARHKKH 277
>gi|390458307|ref|XP_002806566.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Callithrix jacchus]
Length = 363
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|431900754|gb|ELK08195.1| LIM/homeobox protein Lhx6 [Pteropus alecto]
Length = 272
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 107/151 (70%), Gaps = 8/151 (5%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+ HY
Sbjct: 19 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 78
Query: 675 ELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 726
+++ ++++G SE AKR RT+FT EQLQV+QA F D+NPD
Sbjct: 79 TMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 138
Query: 727 QDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 139 QTLQKLADMTGLSRRVIQVWFQNCRARHKKH 169
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 90 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 149
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 150 LSRRVIQVWFQNCRARHKKH 169
>gi|297270222|ref|XP_001089041.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Macaca mulatta]
Length = 392
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|134284359|ref|NP_055183.2| LIM/homeobox protein Lhx6 isoform 1 [Homo sapiens]
gi|297685270|ref|XP_002820218.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pongo abelii]
gi|221042862|dbj|BAH13108.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|51571915|ref|NP_001004015.1| LIM/homeobox protein Lhx6 [Danio rerio]
gi|50953777|gb|AAT90495.1| Lhx6 [Danio rerio]
gi|190336767|gb|AAI62225.1| LIM homeobox 6 [Danio rerio]
Length = 375
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 151 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 210
Query: 672 HYLELVDGGTTSSDDGA--------DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +V+ +++ G+ SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 211 HYDTMVENLKRAAESGSGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 270
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 271 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 304
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 52/79 (65%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TGL
Sbjct: 226 GSGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGL 285
Query: 100 SKRVTQVWFQNSRARQKKH 118
S+RV QVWFQN RAR KKH
Sbjct: 286 SRRVIQVWFQNCRARHKKH 304
>gi|344271981|ref|XP_003407815.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Loxodonta africana]
Length = 392
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 287 LSRRVIQVWFQNCRARHKKH 306
>gi|344241263|gb|EGV97366.1| LIM/homeobox protein Lhx6 [Cricetulus griseus]
Length = 363
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 258 LSRRVIQVWFQNCRARHKKH 277
>gi|348570158|ref|XP_003470864.1| PREDICTED: LIM/homeobox protein Lhx6-like [Cavia porcellus]
Length = 363
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|345806127|ref|XP_548475.3| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Canis lupus
familiaris]
Length = 363
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|332832786|ref|XP_001135172.2| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Pan troglodytes]
Length = 392
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 319
>gi|444724034|gb|ELW64656.1| LIM/homeobox protein Lhx6 [Tupaia chinensis]
Length = 336
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 102 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 161
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 162 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 221
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 222 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 255
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 176 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 235
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 236 LSRRVIQVWFQNCRARHKKH 255
>gi|444727546|gb|ELW68032.1| LIM/homeobox protein Lhx8 [Tupaia chinensis]
Length = 348
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 121 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 180
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA D + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 181 HYDCMLDNLKREVENGNGISVEGALLTDQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 239
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 240 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 276
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + TD + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 195 NGNGISVEGALLTDQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 253
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 254 TGLSRRVIQVWFQNCRARHKKHV 276
>gi|300797193|ref|NP_001179777.1| LIM/homeobox protein Lhx6 [Bos taurus]
gi|296482368|tpg|DAA24483.1| TPA: LIM homeobox 6 isoform 1 [Bos taurus]
Length = 392
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 57/93 (61%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S +P
Sbjct: 287 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAQP 319
>gi|148676723|gb|EDL08670.1| LIM homeobox protein 6, isoform CRA_d [Mus musculus]
Length = 388
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 149 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 208
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 209 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 268
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 269 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 302
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 223 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 282
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 283 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 315
>gi|157821727|ref|NP_001101307.1| LIM/homeobox protein Lhx6 [Rattus norvegicus]
gi|149038910|gb|EDL93130.1| LIM homeobox protein 6 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 388
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 149 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 208
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 209 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 268
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 269 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 302
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 223 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 282
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 283 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 315
>gi|397526998|ref|XP_003833397.1| PREDICTED: LIM/homeobox protein Lhx6 [Pan paniscus]
Length = 377
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 138 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 197
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 198 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 257
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 258 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 291
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 212 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 271
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 272 LSRRVIQVWFQNCRARHKKH 291
>gi|403266043|ref|XP_003925207.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 381
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 276 LSRRVIQVWFQNCRARHKKH 295
>gi|133892446|ref|NP_001076595.1| LIM/homeobox protein Lhx6 isoform 3 [Mus musculus]
gi|341940899|sp|Q9R1R0.2|LHX6_MOUSE RecName: Full=LIM/homeobox protein Lhx6; Short=LIM homeobox protein
6; AltName: Full=LIM/homeobox protein Lhx6.1
gi|40787713|gb|AAH65077.1| Lhx6 protein [Mus musculus]
Length = 363
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|281337700|gb|EFB13284.1| hypothetical protein PANDA_004030 [Ailuropoda melanoleuca]
Length = 360
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 126 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 185
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 186 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 245
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 246 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 279
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 200 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 259
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 260 LSRRVIQVWFQNCRARHKKH 279
>gi|395536948|ref|XP_003770470.1| PREDICTED: LIM/homeobox protein Lhx8-like [Sarcophilus harrisii]
Length = 362
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 135 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 194
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 195 HYDCMMDNLKREVENGNGISVEGALLSEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 253
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 254 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 290
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + ++ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 209 NGNGISVEGALLSEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 267
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 268 TGLSRRVIQVWFQNCRARHKKHV 290
>gi|390458311|ref|XP_003732089.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Callithrix jacchus]
Length = 381
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 275
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 276 LSRRVIQVWFQNCRARHKKH 295
>gi|440906624|gb|ELR56864.1| LIM/homeobox protein Lhx6, partial [Bos grunniens mutus]
Length = 360
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 126 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 185
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 186 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 245
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 246 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 279
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 200 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 259
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 260 LSRRVIQVWFQNCRARHKKH 279
>gi|301760410|ref|XP_002916006.1| PREDICTED: LIM/homeobox protein Lhx6-like [Ailuropoda melanoleuca]
Length = 390
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 151 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 210
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 211 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 270
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 271 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 304
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 225 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 284
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 285 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 317
>gi|47221465|emb|CAG08127.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 109/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R + +SDWVR+AR VYHLACFAC +CKRQLSTGEEF L E RVLC+S
Sbjct: 73 FSRFGTKCAQCGRQVYASDWVRRARGSVYHLACFACFSCKRQLSTGEEFGLVEGRVLCRS 132
Query: 672 HYLELVD-------GGTTSSDDGA-DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++D GT + +GA S+ AKR RT+FT EQLQV+Q+ F D+N
Sbjct: 133 HYDIMLDNLRRAAENGTGLTLEGALPSDQDCQPKPAKRARTSFTAEQLQVMQSQFAQDNN 192
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A++TGLS+RV QVWFQN RAR KK
Sbjct: 193 PDAQTLQKLAEMTGLSRRVIQVWFQNCRARHKKQ 226
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G S+ AKR RT+FT EQLQV+Q+ F D+NPD Q L+++A++TG
Sbjct: 147 NGTGLTLEGALPSDQDCQPKPAKRARTSFTAEQLQVMQSQFAQDNNPDAQTLQKLAEMTG 206
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KK SQ RP
Sbjct: 207 LSRRVIQVWFQNCRARHKKQPPQSSF--SQRRP 237
>gi|301623765|ref|XP_002941184.1| PREDICTED: LIM/homeobox protein Lhx6-like [Xenopus (Silurana)
tropicalis]
Length = 389
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 150 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRI 209
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 210 HYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 269
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 270 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 303
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 224 NGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 283
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 284 LSRRVIQVWFQNCRARHKKH 303
>gi|5738954|dbj|BAA83420.1| LIM-homeodomain (LHX) protein 6.1b [Mus musculus]
Length = 348
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 107/154 (69%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKKAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TG S+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGFSRRVIQVWFQNCRARHKKH 277
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKH 118
S+RV QVWFQN RAR KKH
Sbjct: 258 FSRRVIQVWFQNCRARHKKH 277
>gi|334311482|ref|XP_001364897.2| PREDICTED: LIM/homeobox protein Lhx6 [Monodelphis domestica]
Length = 391
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 152 FSRFGTKCARCGRQIFASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 211
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 212 HYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 271
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 272 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 305
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 226 NGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 285
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 286 LSRRVIQVWFQNCRARHKKH 305
>gi|348513701|ref|XP_003444380.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 375
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 109/160 (68%), Gaps = 10/160 (6%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 151 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRI 210
Query: 672 HYLELVD--------GGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +V+ G + + +E AKR RT+FT EQLQ++QA F D+N
Sbjct: 211 HYDTMVENLKRAAESGNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNN 270
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL--HTG 761
PD Q L+++A +TGLS+RV QVWFQN RAR KKH H+G
Sbjct: 271 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHSG 310
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G +E AKR RT+FT EQLQ++QA F D+NPD Q L+++A +TGL
Sbjct: 226 GNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDAQTLQKLADMTGL 285
Query: 100 SKRVTQVWFQNSRARQKKHL--HTG 122
S+RV QVWFQN RAR KKH H+G
Sbjct: 286 SRRVIQVWFQNCRARHKKHTPQHSG 310
>gi|345329744|ref|XP_001512364.2| PREDICTED: LIM/homeobox protein Lhx6 [Ornithorhynchus anatinus]
Length = 364
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 125 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 184
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 185 HYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 244
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 245 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 278
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 199 NGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 258
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 259 LSRRVIQVWFQNCRARHKKH 278
>gi|395505631|ref|XP_003757143.1| PREDICTED: LIM/homeobox protein Lhx6 [Sarcophilus harrisii]
Length = 363
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 108/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIFASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 258 LSRRVIQVWFQNCRARHKKH 277
>gi|5738956|dbj|BAA83421.1| LIM-homeodomain (LHX) protein 6.1a [Mus musculus]
Length = 363
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 107/154 (69%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKKAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TG S+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGFSRRVIQVWFQNCRARHKKH 277
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 55/93 (59%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
S+RV QVWFQN RAR KKH + S P
Sbjct: 258 FSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|301763072|ref|XP_002916962.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx8-like
[Ailuropoda melanoleuca]
Length = 574
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 357 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 416
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 417 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 475
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 476 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 512
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 431 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 489
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 490 TGLSRRVIQVWFQNCRARHKKHV 512
>gi|261490776|ref|NP_001159787.1| LIM/homeobox protein Lhx8 [Sus scrofa]
gi|238683613|gb|ACR54090.1| LIM homeobox 8 [Sus scrofa]
Length = 295
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 68 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 127
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 128 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 186
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 187 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 223
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 142 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 200
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 201 TGLSRRVIQVWFQNCRARHKKHV 223
>gi|410927794|ref|XP_003977325.1| PREDICTED: LIM/homeobox protein Lhx6-like, partial [Takifugu
rubripes]
Length = 223
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 10/157 (6%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+ HY
Sbjct: 2 FGTKCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRIHYD 61
Query: 675 ELVD--------GGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 726
+V+ G + + +E AKR RT+FT EQLQ++QA F D+NPD
Sbjct: 62 TMVENLKRAAESGNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDA 121
Query: 727 QDLERIAQITGLSKRVTQVWFQNSRARQKKHL--HTG 761
Q L+++A +TGLS+RV QVWFQN RAR KKH H+G
Sbjct: 122 QTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHSG 158
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G +E AKR RT+FT EQLQ++QA F D+NPD Q L+++A +TGL
Sbjct: 74 GNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDAQTLQKLADMTGL 133
Query: 100 SKRVTQVWFQNSRARQKKHL--HTG 122
S+RV QVWFQN RAR KKH H+G
Sbjct: 134 SRRVIQVWFQNCRARHKKHTPQHSG 158
>gi|117645548|emb|CAL38240.1| hypothetical protein [synthetic construct]
Length = 363
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 107/154 (69%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACF C +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFTCFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 258 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|432887976|ref|XP_004075005.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 366
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 10/157 (6%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+ HY
Sbjct: 145 FGTKCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRIHYD 204
Query: 675 ELVD--------GGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 726
+V+ G + + +E AKR RT+FT EQLQ++QA F D+NPD
Sbjct: 205 TMVENLKRAAESGNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDA 264
Query: 727 QDLERIAQITGLSKRVTQVWFQNSRARQKKHL--HTG 761
Q L+++A +TGLS+RV QVWFQN RAR KKH H+G
Sbjct: 265 QTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHSG 301
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G +E AKR RT+FT EQLQ++QA F D+NPD Q L+++A +TGL
Sbjct: 217 GNGITLEGAVPTEQDSQPKPAKRARTSFTAEQLQIMQAQFAQDNNPDAQTLQKLADMTGL 276
Query: 100 SKRVTQVWFQNSRARQKKHL--HTG 122
S+RV QVWFQN RAR KKH H+G
Sbjct: 277 SRRVIQVWFQNCRARHKKHTPQHSG 301
>gi|351696280|gb|EHA99198.1| LIM/homeobox protein Lhx8 [Heterocephalus glaber]
Length = 348
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 121 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 180
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 181 HYDFMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 239
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 240 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 276
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 7/104 (6%)
Query: 22 EEQLQVLQANFQLDS------NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVL 75
E+ L + +F LD+ N +G + T+ + +H K AKR RT+FT +QLQV+
Sbjct: 174 EKVLCRVHYDFMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVM 232
Query: 76 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 233 QAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 276
>gi|403257739|ref|XP_003921454.1| PREDICTED: LIM/homeobox protein Lhx8 [Saimiri boliviensis
boliviensis]
Length = 346
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 179 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 237
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 238 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 274
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 193 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 252 TGLSRRVIQVWFQNCRARHKKHV 274
>gi|440907910|gb|ELR57994.1| LIM/homeobox protein Lhx8 [Bos grunniens mutus]
Length = 375
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 148 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 207
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 208 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 266
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 267 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 303
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 222 NGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 280
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 281 TGLSRRVIQVWFQNCRARHKKHV 303
>gi|395821904|ref|XP_003784270.1| PREDICTED: LIM/homeobox protein Lhx8 [Otolemur garnettii]
Length = 346
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 179 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 237
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 238 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 274
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 193 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 252 TGLSRRVIQVWFQNCRARHKKHV 274
>gi|426218775|ref|XP_004003612.1| PREDICTED: LIM/homeobox protein Lhx8 [Ovis aries]
Length = 442
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 215 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 274
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 275 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 333
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 334 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 370
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 289 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 347
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 348 TGLSRRVIQVWFQNCRARHKKHV 370
>gi|332222205|ref|XP_003260257.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Nomascus
leucogenys]
Length = 356
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 129 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 188
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 189 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 247
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 248 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 284
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 203 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 261
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 262 TGLSRRVIQVWFQNCRARHKKHV 284
>gi|51494804|gb|AAH40321.1| LIM homeobox 8 [Homo sapiens]
gi|312150920|gb|ADQ31972.1| LIM homeobox 8 [synthetic construct]
Length = 356
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 129 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 188
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 189 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 247
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 248 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 284
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 203 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 261
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 262 TGLSRRVIQVWFQNCRARHKKHV 284
>gi|297278964|ref|XP_001097664.2| PREDICTED: LIM/homeobox protein Lhx8-like [Macaca mulatta]
gi|402854981|ref|XP_003892128.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Papio anubis]
Length = 356
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 129 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 188
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 189 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 247
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 248 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 284
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 203 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 261
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 262 TGLSRRVIQVWFQNCRARHKKHV 284
>gi|224058535|ref|XP_002189228.1| PREDICTED: LIM/homeobox protein Lhx8 [Taeniopygia guttata]
Length = 347
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 120 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 179
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 180 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 238
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 239 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 275
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 194 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 252
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 253 TGLSRRVIQVWFQNCRARHKKHV 275
>gi|297473064|ref|XP_002686347.1| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
gi|296489244|tpg|DAA31357.1| TPA: LIM domain family member (lim-4)-like [Bos taurus]
Length = 346
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 179 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 237
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 238 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 274
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 193 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 252 TGLSRRVIQVWFQNCRARHKKHV 274
>gi|410967547|ref|XP_003990280.1| PREDICTED: LIM/homeobox protein Lhx8 [Felis catus]
Length = 346
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 179 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 237
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 238 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 274
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 193 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 252 TGLSRRVIQVWFQNCRARHKKHV 274
>gi|345321288|ref|XP_001521123.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Ornithorhynchus
anatinus]
Length = 347
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 120 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 179
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 180 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 238
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 239 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 275
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 194 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 252
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 253 TGLSRRVIQVWFQNCRARHKKHV 275
>gi|50083287|ref|NP_001001933.1| LIM/homeobox protein Lhx8 isoform 1 [Homo sapiens]
gi|114557210|ref|XP_524738.2| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pan troglodytes]
gi|297664648|ref|XP_002810744.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pongo abelii]
gi|397521070|ref|XP_003830626.1| PREDICTED: LIM/homeobox protein Lhx8 [Pan paniscus]
gi|426330048|ref|XP_004026038.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Gorilla gorilla
gorilla]
gi|296434566|sp|Q68G74.2|LHX8_HUMAN RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8
Length = 356
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 129 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 188
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 189 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 247
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 248 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 284
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 203 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 261
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 262 TGLSRRVIQVWFQNCRARHKKHV 284
>gi|368711326|ref|NP_001243043.1| LIM/homeobox protein Lhx8 isoform 2 [Homo sapiens]
gi|395730366|ref|XP_003775714.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Pongo abelii]
gi|410033125|ref|XP_003949492.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 1 [Pan troglodytes]
gi|426330050|ref|XP_004026039.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Gorilla gorilla
gorilla]
gi|441637563|ref|XP_004090066.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Nomascus
leucogenys]
Length = 346
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 179 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 237
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 238 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 274
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 193 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 252 TGLSRRVIQVWFQNCRARHKKHV 274
>gi|281354377|gb|EFB29961.1| hypothetical protein PANDA_005098 [Ailuropoda melanoleuca]
Length = 351
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 124 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 183
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 184 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 242
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 243 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 279
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 198 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 256
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 257 TGLSRRVIQVWFQNCRARHKKHV 279
>gi|355745377|gb|EHH50002.1| hypothetical protein EGM_00758, partial [Macaca fascicularis]
Length = 320
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 93 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 152
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 153 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 211
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 212 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 248
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 167 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 225
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 226 TGLSRRVIQVWFQNCRARHKKHV 248
>gi|402854983|ref|XP_003892129.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Papio anubis]
Length = 346
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 179 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 237
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 238 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 274
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 193 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 252 TGLSRRVIQVWFQNCRARHKKHV 274
>gi|410923575|ref|XP_003975257.1| PREDICTED: LIM/homeobox protein Lhx6-like [Takifugu rubripes]
Length = 310
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 109/154 (70%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R + +SDWVR+AR VYHLACFAC +CKRQLSTGEEF L E RVLC+S
Sbjct: 86 FSRFGTKCAQCGRQVYASDWVRRARGSVYHLACFACFSCKRQLSTGEEFGLVEGRVLCRS 145
Query: 672 HYLELVD-------GGTTSSDDGA-DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++D GT + +GA S+ AKR RT+FT EQLQV+Q+ F D+N
Sbjct: 146 HYDIMLDNLRRAAENGTGLTLEGALPSDQDCQPKPAKRARTSFTAEQLQVMQSQFAQDNN 205
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A++TGLS+RV QVWFQN RAR KK
Sbjct: 206 PDAQTLQKLAEMTGLSRRVIQVWFQNCRARHKKQ 239
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G S+ AKR RT+FT EQLQV+Q+ F D+NPD Q L+++A++TG
Sbjct: 160 NGTGLTLEGALPSDQDCQPKPAKRARTSFTAEQLQVMQSQFAQDNNPDAQTLQKLAEMTG 219
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KK
Sbjct: 220 LSRRVIQVWFQNCRARHKKQ 239
>gi|410924249|ref|XP_003975594.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 338
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 108/158 (68%), Gaps = 11/158 (6%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +C++C R I SSDWVR+ R +HLACF+C +CKRQLSTGEE L E+RV C+
Sbjct: 112 FRRYGTRCTRCGRNINSSDWVRRVRGSTFHLACFSCSSCKRQLSTGEECGLLENRVFCRP 171
Query: 672 HYLELVD-------GGTTSSDDGAD----SESSHSKSKAKRVRTTFTEEQLQVLQANFQL 720
HY +V+ G S+DG D E+S + AKR RT+FT +QLQV+Q F
Sbjct: 172 HYEMVVENIKRAKKNGEPDSNDGEDMGDKEEASTTARPAKRARTSFTVDQLQVMQTQFAK 231
Query: 721 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
DSNPD Q L+R++ TGLS+RV QVWFQN RARQKKH+
Sbjct: 232 DSNPDAQTLQRLSDRTGLSRRVIQVWFQNCRARQKKHI 269
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 23 EQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSK-AKRVRTTFTEEQLQVLQANFQL 81
E ++ + N + DSN D D D E + + ++ AKR RT+FT +QLQV+Q F
Sbjct: 178 ENIKRAKKNGEPDSN------DGEDMGDKEEASTTARPAKRARTSFTVDQLQVMQTQFAK 231
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
DSNPD Q L+R++ TGLS+RV QVWFQN RARQKKH+
Sbjct: 232 DSNPDAQTLQRLSDRTGLSRRVIQVWFQNCRARQKKHI 269
>gi|327276679|ref|XP_003223095.1| PREDICTED: LIM/homeobox protein Lhx8-like [Anolis carolinensis]
Length = 379
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 152 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 211
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 212 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 270
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 271 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 307
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 226 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 284
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 285 TGLSRRVIQVWFQNCRARHKKHV 307
>gi|344278994|ref|XP_003411276.1| PREDICTED: LIM/homeobox protein Lhx8 [Loxodonta africana]
Length = 346
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 179 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 237
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 238 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 274
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 193 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 252 TGLSRRVIQVWFQNCRARHKKHV 274
>gi|345321290|ref|XP_003430404.1| PREDICTED: LIM/homeobox protein Lhx8 isoform 2 [Ornithorhynchus
anatinus]
Length = 347
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 120 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 179
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 180 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 238
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 239 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 275
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 194 NGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 252
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 253 TGLSRRVIQVWFQNCRARHKKHV 275
>gi|390466088|ref|XP_002751019.2| PREDICTED: LIM/homeobox protein Lhx8 [Callithrix jacchus]
Length = 346
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 179 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 237
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 238 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 274
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 193 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 252 TGLSRRVIQVWFQNCRARHKKHV 274
>gi|358411510|ref|XP_589896.5| PREDICTED: LIM/homeobox protein Lhx8 [Bos taurus]
Length = 443
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 226 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 285
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 286 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 344
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 345 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 381
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 300 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 358
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 359 TGLSRRVIQVWFQNCRARHKKHV 381
>gi|348533440|ref|XP_003454213.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 392
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 108/153 (70%), Gaps = 8/153 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R + +SDWVR+AR VYHLACFAC +CKRQLSTGEEF L E RVLC+S
Sbjct: 168 FSRFGTKCAQCGRQVYASDWVRRARGSVYHLACFACFSCKRQLSTGEEFGLVEGRVLCRS 227
Query: 672 HYLELVD-------GGTTSSDDGA-DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++D GT + +GA S+ AKR RT+FT EQLQV+Q F D+N
Sbjct: 228 HYDIMLDNLRRAAENGTGLTLEGALPSDQDCQPKPAKRARTSFTAEQLQVMQTQFAQDNN 287
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
PD Q L+++A++TGLS+RV QVWFQN RAR KK
Sbjct: 288 PDAQTLQKLAEMTGLSRRVIQVWFQNCRARHKK 320
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G S+ AKR RT+FT EQLQV+Q F D+NPD Q L+++A++TG
Sbjct: 242 NGTGLTLEGALPSDQDCQPKPAKRARTSFTAEQLQVMQTQFAQDNNPDAQTLQKLAEMTG 301
Query: 99 LSKRVTQVWFQNSRARQKK 117
LS+RV QVWFQN RAR KK
Sbjct: 302 LSRRVIQVWFQNCRARHKK 320
>gi|345802215|ref|XP_547330.3| PREDICTED: LIM/homeobox protein Lhx8 [Canis lupus familiaris]
Length = 462
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 245 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 304
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 305 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 363
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 364 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 400
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 319 NGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 377
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 378 TGLSRRVIQVWFQNCRARHKKHV 400
>gi|291398678|ref|XP_002715959.1| PREDICTED: LIM homeobox 8 [Oryctolagus cuniculus]
Length = 371
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 150 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 209
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 210 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 268
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 269 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 305
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 224 NGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 283 TGLSRRVIQVWFQNCRARHKKHV 305
>gi|348586764|ref|XP_003479138.1| PREDICTED: LIM/homeobox protein Lhx8-like [Cavia porcellus]
Length = 485
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 269 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 328
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 329 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 387
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 388 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 424
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 343 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 401
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 402 TGLSRRVIQVWFQNCRARHKKHV 424
>gi|432872837|ref|XP_004072149.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 346
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 108/153 (70%), Gaps = 8/153 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R + +SDWVR+AR VYHLACFAC +CKRQLSTGEEF L E RVLC+S
Sbjct: 122 FSRFGTKCAQCGRQVYASDWVRRARGSVYHLACFACFSCKRQLSTGEEFGLVEGRVLCRS 181
Query: 672 HYLELVDG-------GTTSSDDGA-DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++D GT + +GA S+ AKR RT+FT EQLQV+Q F D+N
Sbjct: 182 HYDIMLDNLRRAAESGTGLTLEGALPSDQDCQPKPAKRARTSFTSEQLQVMQTQFAQDNN 241
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
PD Q L+++A++TGLS+RV QVWFQN RAR KK
Sbjct: 242 PDAQTLQKLAEMTGLSRRVIQVWFQNCRARHKK 274
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 47/58 (81%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
AKR RT+FT EQLQV+Q F D+NPD Q L+++A++TGLS+RV QVWFQN RAR KK
Sbjct: 217 AKRARTSFTSEQLQVMQTQFAQDNNPDAQTLQKLAEMTGLSRRVIQVWFQNCRARHKK 274
>gi|148679946|gb|EDL11893.1| LIM homeobox protein 8, isoform CRA_a [Mus musculus]
Length = 291
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 79 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 138
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
H+ ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 139 HFDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 197
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 198 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 234
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 153 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 211
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 212 TGLSRRVIQVWFQNCRARHKKHV 234
>gi|94957756|ref|NP_001035556.1| LIM/homeobox protein Lhx8 [Gallus gallus]
gi|71800649|gb|AAZ41374.1| LIM homeodomain protein [Gallus gallus]
Length = 347
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 114/157 (72%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 120 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 179
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+ A F D
Sbjct: 180 HYDCMLDNLKREVENGNGVSMEGALLTEQDVNHPK-PAKRARTSFTADQLQVMXAQFAQD 238
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 239 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 275
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+ A F D+NPD Q L+++A+
Sbjct: 194 NGNGVSMEGALLTEQDVNHPK-PAKRARTSFTADQLQVMXAQFAQDNNPDAQTLQKLAER 252
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 253 TGLSRRVIQVWFQNCRARHKKHV 275
>gi|62859451|ref|NP_001015899.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
gi|89268071|emb|CAJ83129.1| LIM homeobox 7/8 [Xenopus (Silurana) tropicalis]
gi|110645724|gb|AAI18740.1| LIM homeobox 8 [Xenopus (Silurana) tropicalis]
Length = 374
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 112/156 (71%), Gaps = 9/156 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I ++DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 147 FRRYGTRCSRCGRHIHATDWVRRAKGNVYHLACFACYSCKRQLSTGEEFALVEEKVLCRV 206
Query: 672 HYLELVD-------GGTTSSDDGA--DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
HY ++D G S +GA + + AKR RT+FT +QLQV+QA F D+
Sbjct: 207 HYDCMLDNLKRAVENGNRVSVEGALLTEQDINQPKPAKRARTSFTADQLQVMQAQFAQDN 266
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
NPD Q L+++++ TGLS+RV QVWFQN RAR KKH+
Sbjct: 267 NPDAQTLQKLSERTGLSRRVIQVWFQNCRARHKKHV 302
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
AKR RT+FT +QLQV+QA F D+NPD Q L+++++ TGLS+RV QVWFQN RAR KKH+
Sbjct: 243 AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLSERTGLSRRVIQVWFQNCRARHKKHV 302
>gi|113195680|ref|NP_034843.2| LIM/homeobox protein Lhx8 [Mus musculus]
gi|341941136|sp|O35652.4|LHX8_MOUSE RecName: Full=LIM/homeobox protein Lhx8; Short=LIM homeobox protein
8; AltName: Full=L3; AltName: Full=LIM/homeobox protein
Lhx7; Short=LIM homeobox protein 7
gi|3172042|dbj|BAA28628.1| LIM-homeodomain protein [Mus musculus]
gi|74227158|dbj|BAE38359.1| unnamed protein product [Mus musculus]
gi|116138618|gb|AAI25284.1| LIM homeobox protein 8 [Mus musculus]
gi|116138795|gb|AAI25282.1| LIM homeobox protein 8 [Mus musculus]
gi|148679947|gb|EDL11894.1| LIM homeobox protein 8, isoform CRA_b [Mus musculus]
gi|219519204|gb|AAI44769.1| LIM homeobox protein 8 [Mus musculus]
gi|1587483|prf||2206477A LIM homeo domain transcription factor
Length = 367
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 150 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 209
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
H+ ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 210 HFDCMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 268
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 269 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 305
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 224 NGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 283 TGLSRRVIQVWFQNCRARHKKHV 305
>gi|149026292|gb|EDL82535.1| rCG29002 [Rattus norvegicus]
Length = 367
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 150 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 209
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
H+ ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 210 HFDCMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 268
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 269 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 305
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 224 NGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 283 TGLSRRVIQVWFQNCRARHKKHV 305
>gi|58866006|ref|NP_001012219.1| LIM/homeobox protein Lhx8 [Rattus norvegicus]
gi|58476609|gb|AAH90011.1| LIM homeobox 8 [Rattus norvegicus]
Length = 336
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
H+ ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 179 HFDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 237
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 238 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 274
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 193 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 251
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 252 TGLSRRVIQVWFQNCRARHKKHV 274
>gi|3319763|emb|CAA04012.1| Lhx7 protein [Mus musculus]
Length = 365
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 149 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 208
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
H+ ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 209 HFDCMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 267
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 268 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 304
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 223 NGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 281
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 282 TGLSRRVIQVWFQNCRARHKKHV 304
>gi|71361857|gb|AAZ30032.1| LIM homeodomain protein, partial [Gallus gallus]
Length = 235
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/152 (54%), Positives = 107/152 (70%), Gaps = 8/152 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 84 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 143
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 144 HYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 203
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
PD Q L+++A +TGLS+RV QVWFQN RARQK
Sbjct: 204 PDAQTLQKLADMTGLSRRVIQVWFQNCRARQK 235
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 52/78 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 158 NGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 217
Query: 99 LSKRVTQVWFQNSRARQK 116
LS+RV QVWFQN RARQK
Sbjct: 218 LSRRVIQVWFQNCRARQK 235
>gi|2285798|dbj|BAA21649.1| LIM-homeodomain protein [Mus musculus]
Length = 426
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 115/157 (73%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 209 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 268
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
H+ ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 269 HFDCMLDNLKREVENGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQD 327
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 328 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 364
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 283 NGNGISVEGALLTEQDVNHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 341
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 342 TGLSRRVIQVWFQNCRARHKKHV 364
>gi|354468096|ref|XP_003496503.1| PREDICTED: LIM/homeobox protein Lhx8-like [Cricetulus griseus]
Length = 344
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 114/157 (72%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 127 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 186
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
H++ ++D G S +GA + + SH K AKR RT+FT +QLQV+QA F D
Sbjct: 187 HFICMLDNLKREVENGNGISVEGALLTEQDVSHPK-PAKRARTSFTADQLQVMQAQFAQD 245
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN R KKH+
Sbjct: 246 NNPDAQTLQKLAERTGLSRRVIQVWFQNCSPRHKKHV 282
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + SH K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 201 NGNGISVEGALLTEQDVSHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 259
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN R KKH+
Sbjct: 260 TGLSRRVIQVWFQNCSPRHKKHV 282
>gi|51571947|ref|NP_001003980.1| LIM/homeobox protein Lhx8 [Danio rerio]
gi|50953779|gb|AAT90496.1| Lhx7 [Danio rerio]
gi|108742021|gb|AAI17602.1| LIM homeobox 8 [Danio rerio]
Length = 332
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 112/156 (71%), Gaps = 9/156 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +C+ C R I S+DWVR+A+ + YHLACFAC +CKRQLSTGEEFAL ++RVLC+
Sbjct: 105 FRKYGTRCAHCGRNIHSNDWVRRAKGNTYHLACFACFSCKRQLSTGEEFALVDERVLCRV 164
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY ++D + ++G SE ++ K AKR RT+FT +QLQV+QA F D+
Sbjct: 165 HYDCMLDNLKRAMENGKGVNVEGAVPSEQEVNQPKPAKRARTSFTADQLQVMQAQFAQDN 224
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 225 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 260
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 39 DGFGADSTDHTDSESSHSKSK-AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
+G G + SE ++ K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+ T
Sbjct: 179 NGKGVNVEGAVPSEQEVNQPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERT 238
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GLS+RV QVWFQN RAR KKH+
Sbjct: 239 GLSRRVIQVWFQNCRARHKKHV 260
>gi|74213688|dbj|BAE35644.1| unnamed protein product [Mus musculus]
Length = 367
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 114/157 (72%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 150 FRRYGTRCSRCGRHIHSIDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 209
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
H+ ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 210 HFDCMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 268
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 269 NNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 305
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 224 NGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN RAR KKH+
Sbjct: 283 TGLSRRVIQVWFQNCRARHKKHV 305
>gi|340383577|ref|XP_003390293.1| PREDICTED: hypothetical protein LOC100639583 [Amphimedon
queenslandica]
Length = 1768
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 243/519 (46%), Gaps = 35/519 (6%)
Query: 77 ANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN--SRARQKKHLHTGKMKSSQNRPKYG 134
A F L + P + LE +++ VTQ+W+ + S A +L T K SQ ++G
Sbjct: 278 AMFALATVPLIKSLEEVSE-------VTQLWYADDASAAGSLSNLKTWWEKLSQLGKEFG 330
Query: 135 YYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEK-RFLGGVIGNGDEKKNYVKEKVNQW 193
Y+P K+ L++ + + A LF D V++VT+ LG IG+ K ++ KV +W
Sbjct: 331 YFPNAGKTSLLVSNENYKRACALFQDTGVKVVTDGVTVLGSPIGSPAFVKEHINAKVKEW 390
Query: 194 IDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVPSIF 253
++ +K L++ A PQAA+ ++ L W + R V D L E I + L+P+I
Sbjct: 391 VNEIKVLADIAVSHPQAAYCGLSHGLYGHWTYFCRSVLVSDDVVDSLEECIRNVLIPAIT 450
Query: 254 -EHEISSSEHELFHLPTRFGGLGINDP-VETAQH---AFAVTSEKCKVLVDSLLKQEQLN 308
+ ++ +E + LPTRFGG+GI +P ++Q + AVT +VL L QL
Sbjct: 451 GKDAVNDTERQWLSLPTRFGGMGIINPKTHSSQQYHDSLAVTDPMVQVL---LQGDGQLP 507
Query: 309 LQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKS 368
+ + VK ++E+ ++ E + S LP R+ E +S WL +P
Sbjct: 508 VDTLIETVKVKKQLLKKKEES-HKVMCELVKSELPNEHVRLFEIGNEKGASVWLTALPLR 566
Query: 369 SDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRD 428
FDL FRDA+ +RY LP+ C CG SV HAL+C GG H+ +RD
Sbjct: 567 EHGFDLHKGAFRDAVCIRYGWRPPDLPSSC-VCGHAFSVDHALSCTYGGFHTLRHNNVRD 625
Query: 429 ECIMMASYAWNGIVKEP---------IMRDSSSTSPALIADFKINGVW-EAGGTAFFDNR 478
+ + + +EP + S+ T D + W G +FFD R
Sbjct: 626 LLVSLLKDVCPNVCREPSLQPLSGERLFHRSACTEDGARLDIAVEEFWGYQGRRSFFDVR 685
Query: 479 IVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLR-ASFTPLVCSTDGALHLEFHSFL 537
+ N P+Y Q+ + KR+ ++K KY+ ++ F PLV S ++L
Sbjct: 686 VFNPLTPTYRGQSLASCYKRNEEDKKRKYDERVREVEHGCFAPLVFSAAVKINLNNKEMS 745
Query: 538 KRIAL----VLSEKWKKMYGHVLSWLRVRTEFSILKAVS 572
+R + + ++K K+ ++ ++ + ++S K V+
Sbjct: 746 ERTRIFQRKINNDKKKETPVQAIAKMKPKKDYSYDKEVA 784
>gi|449672599|ref|XP_004207748.1| PREDICTED: uncharacterized protein LOC101240436 [Hydra
magnipapillata]
Length = 497
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 185/357 (51%), Gaps = 19/357 (5%)
Query: 239 PLREIIHSTLVPSIFEHEISSSEH--ELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKV 296
P+ EI L+P++F + +H +LF L R GGLGI VE A H F + + K
Sbjct: 120 PVDEIFSHLLLPTLFGKDTPFEDHIRKLFTLTPRDGGLGIPILVEEAPHQFLSSVKLTKN 179
Query: 297 LVDSLLKQEQLNLQEHNQCVKNAI-NTELVRKETEYQEKQERIL---SSLPPAKQRVLTR 352
LV ++ Q+ + L+ N C N + + E + + ++E+I+ S P + R + +
Sbjct: 180 LVQQIIDQDTI-LKTKN-CSGNILEDLEKILTTDRLKHRKEKIIAVDSMQPDSMLRNIQQ 237
Query: 353 IVEGQSSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALN 412
+S WLN +P + F L+ +FRDAL L YN LK +P C+ C +VTHAL+
Sbjct: 238 TRSECASTWLNALPLENQGFVLNKEEFRDALCLCYNFDLKNIPRICE-CREPFNVTHALS 296
Query: 413 CKKGGLVKHGHDYLRDECIMMASYAWNGIVKEP--IMRD-------SSSTSPALIADFKI 463
CKKGG + HD +R+ + + EP I D +++ S D K
Sbjct: 297 CKKGGFISSRHDNIRNLFTTLLKRVCINVQSEPHLIPLDNENFYFYTANKSNQARLDIKA 356
Query: 464 NGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLR-ASFTPLV 522
NG W G TAFFD ++ + ++ S + I ++H +EK +Y+ ++ S TP V
Sbjct: 357 NGFWRNGQTAFFDVKVTHVNSMSNKNLDIAAIFRKHEKEKKREYDERVREVEHGSLTPPV 416
Query: 523 CSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTR 579
T+G + E H F++R+A L+EK + Y V++WLR + F IL++ L LRG+R
Sbjct: 417 FGTNGGMGKECHRFVRRLAEKLAEKQNEKYSVVMTWLRTKLSFEILRSTILCLRGSR 473
>gi|432915645|ref|XP_004079190.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oryzias latipes]
Length = 314
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 108/159 (67%), Gaps = 8/159 (5%)
Query: 609 LICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL 668
+ FR +G +C++C R I S+DWVR+A+ +HLACF+C +CKRQLSTGEE L E+RV
Sbjct: 86 FVFFRRYGTRCARCGRNIHSTDWVRRAKGSTFHLACFSCASCKRQLSTGEECGLFENRVF 145
Query: 669 CKSHYLELVDGGTTS--------SDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQL 720
C+ HY ++ S D A+ ESS AKR RT+FT +QLQV+Q F
Sbjct: 146 CRPHYDVAMENLKRSKENEQPQPEDRSANKESSTVGRPAKRARTSFTVDQLQVMQTQFAK 205
Query: 721 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 759
D+NPD Q L+++A+ TGLS+RV QVWFQN RARQKKH++
Sbjct: 206 DNNPDAQTLQKLAEKTGLSRRVIQVWFQNCRARQKKHIN 244
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
+ ESS AKR RT+FT +QLQV+Q F D+NPD Q L+++A+ TGLS+RV QVWFQ
Sbjct: 174 NKESSTVGRPAKRARTSFTVDQLQVMQTQFAKDNNPDAQTLQKLAEKTGLSRRVIQVWFQ 233
Query: 110 NSRARQKKHLH 120
N RARQKKH++
Sbjct: 234 NCRARQKKHIN 244
>gi|348505012|ref|XP_003440055.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 338
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 113/164 (68%), Gaps = 9/164 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G C+ C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E +VLC+
Sbjct: 109 FRRYGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEGKVLCRV 168
Query: 672 HYLELVD--------GGTTSSDDGADSESSHSKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY ++D G + + + +E ++ K +KR RT+FT +QLQV+QA F D+
Sbjct: 169 HYDCMLDNLKRAVEKGNSVNMEGAVPTEQEINQPKPSKRARTSFTADQLQVMQAQFAQDN 228
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ S+
Sbjct: 229 NPDAQTLQKLAEQTGLSRRVIQVWFQNCRARHKKHVSPNHTSST 272
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 8/111 (7%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
+KR RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 205 SKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAEQTGLSRRVIQVWFQNCRARHKKHV 264
Query: 120 ---HTGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLL-----FHDLH 162
HT + +P + P P L E S+L F D+H
Sbjct: 265 SPNHTSSTPMTSLQPSHLSQPTPTPEELQYTAYGGPEGSMLSALHSFIDIH 315
>gi|344237493|gb|EGV93596.1| LIM/homeobox protein Lhx8 [Cricetulus griseus]
Length = 230
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 112/154 (72%), Gaps = 11/154 (7%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
+G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+ H++
Sbjct: 29 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFI 88
Query: 675 ELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 724
++D G S +GA + + SH K AKR RT+FT +QLQV+QA F D+NP
Sbjct: 89 CMLDNLKREVENGNGISVEGALLTEQDVSHPK-PAKRARTSFTADQLQVMQAQFAQDNNP 147
Query: 725 DGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
D Q L+++A+ TGLS+RV QVWFQN R KKH+
Sbjct: 148 DAQTLQKLAERTGLSRRVIQVWFQNCSPRHKKHV 181
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + SH K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 100 NGNGISVEGALLTEQDVSHPK-PAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 158
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
TGLS+RV QVWFQN R KKH+
Sbjct: 159 TGLSRRVIQVWFQNCSPRHKKHV 181
>gi|348531406|ref|XP_003453200.1| PREDICTED: LIM/homeobox protein Lhx8-like [Oreochromis niloticus]
Length = 386
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 113/164 (68%), Gaps = 9/164 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +C++C R I SSDWVR+AR +HLACF+C +CKRQLSTGEE L E+RV C+
Sbjct: 160 FRRYGTRCARCGRNIHSSDWVRRARGSTFHLACFSCTSCKRQLSTGEECGLLENRVFCRP 219
Query: 672 HYLELVDGGTTSSD-----DGADSESSHSK----SKAKRVRTTFTEEQLQVLQANFQLDS 722
HY +++ + + +G S+ ++SK AKR RT+FT +QLQV+Q F D+
Sbjct: 220 HYDIMIENLKRAKENSECMNGQGSDLNYSKLILPKPAKRARTSFTVDQLQVMQTQFAKDN 279
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A TGLS+RV QVWFQN RARQKKH++ +S+
Sbjct: 280 NPDAQTLQKLADRTGLSRRVIQVWFQNCRARQKKHINPNPAQST 323
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 52/68 (76%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
AKR RT+FT +QLQV+Q F D+NPD Q L+++A TGLS+RV QVWFQN RARQKKH+
Sbjct: 256 AKRARTSFTVDQLQVMQTQFAKDNNPDAQTLQKLADRTGLSRRVIQVWFQNCRARQKKHI 315
Query: 120 HTGKMKSS 127
+ +S+
Sbjct: 316 NPNPAQST 323
>gi|47215186|emb|CAG01452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 112/156 (71%), Gaps = 9/156 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G C+ C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 66 FRRYGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 125
Query: 672 HYLELVD--------GGTTSSDDGADSESSHSKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY ++D G + + + +E ++ K +KR RT+FT +QLQV+QA F D+
Sbjct: 126 HYDCMLDNLKRAVEKGNSVNMEGAVPTEQEINQPKPSKRARTSFTADQLQVMQAQFAQDN 185
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 186 NPDAQTLQKLAEQTGLSRRVIQVWFQNCRARHKKHV 221
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 16/109 (14%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH- 118
+KR RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH
Sbjct: 162 SKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAEQTGLSRRVIQVWFQNCRARHKKHV 221
Query: 119 ------------LHTGKMKSSQNRP---KYGYYPEPNKSFLVIKPQFLE 152
L G++ P +Y Y P S L F++
Sbjct: 222 SPNHSSSAPMTSLQPGRLSQQPPTPEELQYTLYGGPEGSMLSALHSFID 270
>gi|74355157|gb|AAI03939.1| LIM homeobox 6 [Homo sapiens]
Length = 362
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 107/154 (69%), Gaps = 9/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLA FAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLA-FACFSCKRQLSTGEEFGLVEEKVLCRI 182
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 183 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 242
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 243 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 276
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 56/93 (60%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 197 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 256
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
LS+RV QVWFQN RAR KKH + S P
Sbjct: 257 LSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPP 289
>gi|3319761|emb|CAA04011.1| Lhx6 protein [Mus musculus]
Length = 361
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 105/154 (68%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC+ C R I +SDWVR+AR + YHLACFAC +CKR +STGEEF L E++V C+
Sbjct: 142 FSRFGTKCALCGRQIYASDWVRRARGNAYHLACFACFSCKRHVSTGEEFVLVEEKVFCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 202 HYDTMIENLKRAAENGNVLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 261
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 262 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 295
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 50/68 (73%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN
Sbjct: 228 SEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQN 287
Query: 111 SRARQKKH 118
RAR KKH
Sbjct: 288 CRARHKKH 295
>gi|410921222|ref|XP_003974082.1| PREDICTED: LIM/homeobox protein Lhx8-like [Takifugu rubripes]
Length = 324
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 112/156 (71%), Gaps = 9/156 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G C+ C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 109 FRRYGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 168
Query: 672 HYLELVD--------GGTTSSDDGADSESSHSKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY ++D G + + + +E ++ K +KR RT+FT +QLQV+QA F D+
Sbjct: 169 HYDCMLDNLKRAVEKGNSVNMEGAVPTEQEINQPKPSKRARTSFTADQLQVMQAQFAQDN 228
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 229 NPDAQTLQKLAEQTGLSRRVIQVWFQNCRARHKKHV 264
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 65/116 (56%), Gaps = 16/116 (13%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
+KR RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 205 SKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAEQTGLSRRVIQVWFQNCRARHKKHV 264
Query: 120 ---HTGKMKSSQNRP-------------KYGYYPEPNKSFLVIKPQFLEEASLLFH 159
HT + +P +Y Y P S L F++ FH
Sbjct: 265 SPNHTSSAPMTSLQPSRLSQQPPTPEELQYTVYGGPEGSMLSALHSFIDSEPQPFH 320
>gi|432853477|ref|XP_004067726.1| PREDICTED: LIM/homeobox protein Lhx8 [Oryzias latipes]
Length = 338
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 115/164 (70%), Gaps = 9/164 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G C+ C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E +VLC+
Sbjct: 109 FRRYGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEGKVLCRI 168
Query: 672 HYLELVDG-------GTTSSDDGA-DSESSHSKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY ++D GT + +GA +E ++ K +KR RT+FT +QLQV+QA F D+
Sbjct: 169 HYDCMLDNLKRAVEKGTGVNMEGAVPTEQEINQPKPSKRARTSFTADQLQVMQAQFAQDN 228
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ SS
Sbjct: 229 NPDAQTLQKLAEETGLSRRVIQVWFQNCRARHKKHVSPNHSSSS 272
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + T+ E + K +KR RT+FT +QLQV+QA F D+NPD Q L+++A+ TGL
Sbjct: 186 GVNMEGAVPTEQEINQPK-PSKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAEETGL 244
Query: 100 SKRVTQVWFQNSRARQKKHLHTGKMKSS 127
S+RV QVWFQN RAR KKH+ SS
Sbjct: 245 SRRVIQVWFQNCRARHKKHVSPNHSSSS 272
>gi|221104339|ref|XP_002156835.1| PREDICTED: LIM/homeobox protein Awh-like [Hydra magnipapillata]
Length = 203
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 104/154 (67%), Gaps = 15/154 (9%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---L 674
KCS C R I +DW+R+A+ +VYHLACF+C+ CKRQLSTGEEFA ED +LCK HY L
Sbjct: 18 KCSSCSRPIQLTDWIRRAKQNVYHLACFSCDICKRQLSTGEEFAFIEDSILCKLHYVEHL 77
Query: 675 ELVDGGTTSSDDGADSESSHS------------KSKAKRVRTTFTEEQLQVLQANFQLDS 722
EL + + E+S ++K KRVRT+FT+EQ+ +LQANF LD+
Sbjct: 78 ELPASCPVLLTNSSVMENSPELIVDEDQMWIKHENKNKRVRTSFTDEQVLILQANFDLDA 137
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
NPD +LERIA L KRVTQVWFQNSRARQKK
Sbjct: 138 NPDSNELERIAADVSLPKRVTQVWFQNSRARQKK 171
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 12/87 (13%)
Query: 57 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
++K KRVRT+FT+EQ+ +LQANF LD+NPD +LERIA L KRVTQVWFQNSRARQK
Sbjct: 111 ENKNKRVRTSFTDEQVLILQANFDLDANPDSNELERIAADVSLPKRVTQVWFQNSRARQK 170
Query: 117 KHLHTGKMKSSQNRPKYG------YYP 137
K + + R YG YYP
Sbjct: 171 KQ------QQHKTRNHYGHCGTCNYYP 191
>gi|380806555|gb|AFE75153.1| LIM/homeobox protein Lhx6 isoform 4, partial [Macaca mulatta]
Length = 188
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 100/142 (70%), Gaps = 8/142 (5%)
Query: 624 RGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVDGGTTS 683
R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+ HY +++ +
Sbjct: 1 RQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRA 60
Query: 684 SDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
+++G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +
Sbjct: 61 AENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADM 120
Query: 736 TGLSKRVTQVWFQNSRARQKKH 757
TGLS+RV QVWFQN RAR KKH
Sbjct: 121 TGLSRRVIQVWFQNCRARHKKH 142
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 63 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 122
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 123 LSRRVIQVWFQNCRARHKKH 142
>gi|326925561|ref|XP_003208981.1| PREDICTED: LIM/homeobox protein Lhx8-like [Meleagris gallopavo]
Length = 290
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 108/157 (68%), Gaps = 11/157 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 63 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 122
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 123 HYDCMLDNLKREVENGNGVSVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 181
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+NPD Q L+++A+ QVWFQN RAR KKH+
Sbjct: 182 NNPDAQTLQKLAEXXXXXXXFFQVWFQNCRARHKKHV 218
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 137 NGNGVSVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAEX 195
Query: 97 TGLSKRVTQVWFQNSRARQKKHL 119
QVWFQN RAR KKH+
Sbjct: 196 XXXXXXFFQVWFQNCRARHKKHV 218
>gi|156365876|ref|XP_001626868.1| predicted protein [Nematostella vectensis]
gi|156213760|gb|EDO34768.1| predicted protein [Nematostella vectensis]
Length = 560
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 182/388 (46%), Gaps = 37/388 (9%)
Query: 197 VKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVPSIF--E 254
++ L+E ++ P AAF T + ++ + R + +D P ++I+ + +P++F
Sbjct: 1 MESLTEISRSQPHAAFVAFTNGYKSKFTYYLRTIESFEDYVDPTGDLINDSFLPTLFGRA 60
Query: 255 HEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQ-LNLQEHN 313
+ EL L GG+GI D A F +S+ + VDS++ Q + E
Sbjct: 61 EPLPEELKELATLSPAQGGIGIPDLKREAPEQFKASSDITAIHVDSIVAQSSSMPANEQL 120
Query: 314 QCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFD 373
+ +K INT+ + + +++RI L P
Sbjct: 121 EELKRDINTQ---RRASAKSRRDRIDELLSPDLLHAY--------------------GLA 157
Query: 374 LSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMM 433
L+ +F D+L LRYN L LP++C CG +V+HAL+CKKGG V +D +RD
Sbjct: 158 LNKEEFGDSLCLRYNLPLSNLPSFC-ACGERFTVSHALSCKKGGFVAQRNDTIRDLLTAH 216
Query: 434 ASYAWNGIVKEPIMR---------DSSSTSPALIADFKINGVWEAGGTAFFDNRIVNADA 484
S + EP+++ S+ TS D K G W G TAF D R+ + ++
Sbjct: 217 ISKVCKNVETEPLLQPLDNEVFNLQSTVTSKEARLDMKAGGFWTPGVTAFCDVRVTHVNS 276
Query: 485 PSYSSQTWNTIAKRHAQEKHLKYNTAAEDLR-ASFTPLVCSTDGALHLEFHSFLKRIALV 543
S ++ TI + EK KYN ++ +FTPLV T+G + ++ +FLK +A
Sbjct: 277 QSNQNKPTETIFREQENEKKRKYNQRIINVEIGTFTPLVFGTNGGMGVDCKNFLKYLAEK 336
Query: 544 LSEKWKKMYGHVLSWLRVRTEFSILKAV 571
LS K + Y V+SW+R+ F+IL+ V
Sbjct: 337 LSIKNGEAYASVISWIRIELSFAILRTV 364
>gi|156375231|ref|XP_001629985.1| predicted protein [Nematostella vectensis]
gi|156216997|gb|EDO37922.1| predicted protein [Nematostella vectensis]
Length = 957
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 181/407 (44%), Gaps = 36/407 (8%)
Query: 105 QVWFQNSRARQKKHLHTGKMKSSQNR--PKYGYYPEPNKSFLVIKPQFLEEASLLFHDLH 162
Q WF + L K + N P +GY+P K +++ K A +F
Sbjct: 573 QCWFADDACGAGSILEIKKWWDNINTLGPSFGYFPNAKKCWIISKADKEASAREVFSGTA 632
Query: 163 VQIVTE-KRFLGGVIGNGDEKKNYVKEKVNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQC 221
V + + ++ LG IG+ D + YV EK A + T L+
Sbjct: 633 VNVTVQGQKHLGAFIGSRDYLEEYVNEK--------------------ACNAAYTFGLKH 672
Query: 222 EWAFLQRVVNHCQDEYIPLREIIHSTLVPSIFEHEISSSEHELFHLPTRFGGLGINDPVE 281
+ + R ++ QD PL I + L+P+I +H S E ++ LP R GGL + +P
Sbjct: 673 RYTYFLRTLSDIQDLLEPLENAISNVLIPAITDHRCSPLERDVLALPVRLGGLSMTNPCL 732
Query: 282 TAQHAFAVTSEKCKVLVDSLLKQE-QLNLQEHNQCVKNAINTELVRKETEYQEKQERILS 340
A + + + LV ++ Q QL + ++ A+ +E R E +E+ + I
Sbjct: 733 EADIELSSSVKATAPLVQQIVVQSHQLPDDSVVKSLQQAVKSE--RAEV-LKERADGIRD 789
Query: 341 SLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDG 400
P R L E SS WL V+P ++L+ +FRDA+ LRY+ + +PT C
Sbjct: 790 EAPRNIHRALALAAEKGSSVWLTVLPLREMGYNLNKGEFRDAIKLRYDWPINDIPTTC-M 848
Query: 401 CGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMASYAWNGIVKEPIMRD--------SSS 452
CG + +V HA+ CK+GG + H+ LRD + N + EP+++D S+
Sbjct: 849 CGDKFTVNHAMICKRGGFISQRHNELRDLEADLLDMVCNDVKIEPVLQDITGERLGRGSN 908
Query: 453 TSPALIADFKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRH 499
T+P D G WE AFFD R+ + +A SY + I + H
Sbjct: 909 TAPDARLDIHARGFWEPQRAAFFDVRVCHPNAGSYRDLELHQIYRNH 955
>gi|326668246|ref|XP_685757.4| PREDICTED: LIM/homeobox protein Lhx6 [Danio rerio]
Length = 270
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 103/150 (68%), Gaps = 8/150 (5%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FG KC++C ++++DW+R+A + +YHLACFAC CKRQLSTGEEF L E++VLC+ HY
Sbjct: 89 TFGIKCARCGHQVSANDWIRRAGNDIYHLACFACFFCKRQLSTGEEFGLMENQVLCRVHY 148
Query: 674 -------LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 726
+L D G DGA K+ +KR RT+FT EQ+Q++Q +F D NPD
Sbjct: 149 DITLLNLQQLSDNGNLIHLDGALPIQYLPKA-SKRPRTSFTSEQIQIMQTHFIRDKNPDA 207
Query: 727 QDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+R+A TGLS+RV QVWFQN RARQK+
Sbjct: 208 ATLQRLADTTGLSRRVIQVWFQNCRARQKR 237
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+KR RT+FT EQ+Q++Q +F D NPD L+R+A TGLS+RV QVWFQN RARQK+
Sbjct: 180 SKRPRTSFTSEQIQIMQTHFIRDKNPDAATLQRLADTTGLSRRVIQVWFQNCRARQKR 237
>gi|125823566|ref|XP_001339831.1| PREDICTED: LIM/homeobox protein Lhx8-like [Danio rerio]
Length = 356
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 105/157 (66%), Gaps = 8/157 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR F CS C + SSDWV +A+ +VYHLACF+C +CKRQLSTGEEFAL +++LC+
Sbjct: 140 FRRFQTWCSCCRETLHSSDWVHRAKGNVYHLACFSCFSCKRQLSTGEEFALVGEKLLCRI 199
Query: 672 HYLELVD--------GGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++D G + S + + + +KR RT+FT +QLQV+QA F D+N
Sbjct: 200 HYSSMLDKLNRPAEKGKSVSPEKALAAGCEIKQKPSKRARTSFTADQLQVMQAQFVQDNN 259
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 760
PD Q L+ +A+ TGLS+RV QVWFQN RAR KKH+ T
Sbjct: 260 PDAQMLQSLAEQTGLSRRVIQVWFQNCRARHKKHVST 296
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 49/62 (79%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
+KR RT+FT +QLQV+QA F D+NPD Q L+ +A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 235 SKRARTSFTADQLQVMQAQFVQDNNPDAQMLQSLAEQTGLSRRVIQVWFQNCRARHKKHV 294
Query: 120 HT 121
T
Sbjct: 295 ST 296
>gi|395541258|ref|XP_003772563.1| PREDICTED: LIM/homeobox protein Lhx8-like [Sarcophilus harrisii]
Length = 365
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 101/153 (66%), Gaps = 8/153 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG C C R + SSDWV+KAR +VYHLACF C +CKRQLSTG+EFAL E++VLC+
Sbjct: 139 LRKFGTCCCGCGRYVCSSDWVQKARGYVYHLACFVCFSCKRQLSTGDEFALVEEKVLCRI 198
Query: 672 HYLELVD--------GGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY L D G S +D E AKR RT FT +QLQ++Q ++ ++N
Sbjct: 199 HYDGLEDSLKREAENGNRISMEDALLLEDMKDLKPAKRARTNFTVDQLQIMQGHYTQENN 258
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P+ Q L+++++ TGLS++ Q+WFQN RARQKK
Sbjct: 259 PNAQALQKLSERTGLSRKTVQIWFQNCRARQKK 291
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 46/58 (79%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
AKR RT FT +QLQ++Q ++ ++NP+ Q L+++++ TGLS++ Q+WFQN RARQKK
Sbjct: 234 AKRARTNFTVDQLQIMQGHYTQENNPNAQALQKLSERTGLSRKTVQIWFQNCRARQKK 291
>gi|46276323|gb|AAS86420.1| lhx7 [Oryzias latipes]
Length = 191
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 107/151 (70%), Gaps = 9/151 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G C+ C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E +VLC+
Sbjct: 41 FRRYGTWCACCGRNIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEGKVLCRI 100
Query: 672 HYLELVDG-------GTTSSDDGA-DSESSHSKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY ++D GT + +GA +E ++ K +KR RT+F +QLQV+QA F D+
Sbjct: 101 HYDCMLDNLKRAVEKGTGVNMEGAVPTEREINQPKPSKRARTSFPADQLQVMQAQFAQDN 160
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
NPD Q L+++A+ TGLS+RV QVWFQN AR
Sbjct: 161 NPDAQTLQKLAEETGLSRRVIQVWFQNCSAR 191
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + T+ E + K +KR RT+F +QLQV+QA F D+NPD Q L+++A+ TGL
Sbjct: 118 GVNMEGAVPTEREINQPKP-SKRARTSFPADQLQVMQAQFAQDNNPDAQTLQKLAEETGL 176
Query: 100 SKRVTQVWFQNSRAR 114
S+RV QVWFQN AR
Sbjct: 177 SRRVIQVWFQNCSAR 191
>gi|340385485|ref|XP_003391240.1| PREDICTED: hypothetical protein LOC100633831 [Amphimedon
queenslandica]
Length = 914
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 202/473 (42%), Gaps = 76/473 (16%)
Query: 133 YGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEK-RFLGGVIGNGDEKKNYVKEKVN 191
YGY+P +KS L++K + E AS +F + + T+ R LG IG+ ++K+ V+
Sbjct: 495 YGYFPNASKSVLLVKEESYERASKVFEGSGIVVRTDGVRLLGSPIGSKSFVDGFIKDTVD 554
Query: 192 QWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVPS 251
+W+ +K L A+ PQAA++ T L W + R + D I L E+I
Sbjct: 555 KWLLDLKVLCTFAESQPQAAYAAFTHGLFSRWTYFFRSCDVPPDHLIALDEMI------- 607
Query: 252 IFEHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQLNLQE 311
L +P G IND +E A + +++ S+ + Q
Sbjct: 608 -----------RLRFIPALSGKQAIND-LERDWLALPIRHGGMGLIIPSVFAKAQ----- 650
Query: 312 HNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDN 371
+ C + A S WL+ +P +
Sbjct: 651 YVACERGA---------------------------------------SAWLSALPLADHG 671
Query: 372 FDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECI 431
FDL FRD++ +RY L+ LP+ C C +V HAL+C G H+ LRD
Sbjct: 672 FDLHKGSFRDSVCIRYGWQLQNLPSSCV-CDSPFTVDHALSCPMGRFPTLRHNELRDLTA 730
Query: 432 MMASYAWNGIVKEPIMRD--------SSSTSPALIADFKINGVWEAG-GTAFFDNRIVNA 482
+ + + +EP ++ S+ D ++G WE AFFD +VN
Sbjct: 731 SLLDDVCSNVSREPPLQPLLGESITASTVDGDEACVDIAVDGFWEISHQRAFFDVSVVNP 790
Query: 483 DAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLR-ASFTPLVCSTDGALHLEFHSFLKRIA 541
+ SY T + K+ K KY+ +++ F+PLV S +G L + +RIA
Sbjct: 791 FSKSYKGLTLPAVYKKVENRKKRKYDDRIRNVKHGCFSPLVFSINGGLAPVSDTVFRRIA 850
Query: 542 LVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTRQ-IVKPYGFDDGAGL 593
L+ SEK K Y +++++R + FSIL+ +RGTR+ + +P +D L
Sbjct: 851 LITSEKQNKPYSPLINFIRCKLSFSILRLTIRCIRGTRKSLYRPSVYDPDVAL 903
>gi|156388984|ref|XP_001634772.1| predicted protein [Nematostella vectensis]
gi|156221859|gb|EDO42709.1| predicted protein [Nematostella vectensis]
Length = 769
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 162/333 (48%), Gaps = 25/333 (7%)
Query: 271 FGGLGINDPVETAQHAFAVTSEKCKV--LVDSLLKQ----------EQLNLQEHNQCVKN 318
F G GIN E +H A + + VDS + + EQ+ Q H +
Sbjct: 414 FEGTGINITTEGRKHLGAALGSRPHLEQYVDSKVDEWVGQVCGPLAEQIKQQTHELPCDD 473
Query: 319 AINT---ELVRKETEY-QEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFDL 374
A+ E R++ EY + + + SSLP R + + +S WL V+P +FDL
Sbjct: 474 AVQEAQQEARREKNEYLKSRYAEVKSSLPVNMLRAVDLATQEGASSWLTVLPLRLMSFDL 533
Query: 375 SPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMA 434
+ +FRDAL LRY+ + P+ C CG HA+ CK+GG V H+ LRD +
Sbjct: 534 NKREFRDALGLRYDWEIPETPSIC-VCGDTFDADHAMICKRGGFVIQRHNELRDLEAELL 592
Query: 435 SYAWNGIVKEPIMRD--------SSSTSPALIADFKINGVWEAGGTAFFDNRIVNADAPS 486
S + EP+++D + T+ D G WE AFFD R+ +A+A S
Sbjct: 593 SLVCKDVQTEPVLQDITGEELNRGAHTARDARLDIVARGFWERQRQAFFDVRVCHANAES 652
Query: 487 YSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHLEFHSFLKRIALVLSE 546
Y + I ++H EK +Y E +A+FTPLV + G + E F ++A +++E
Sbjct: 653 YRDMNIDQIFRQHETEKKRQYARVLEVEQATFTPLVFGSTGGMASECQQFHSKLAELIAE 712
Query: 547 KWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTR 579
K ++Y +SW+R + F+IL++ L LRG+R
Sbjct: 713 KKGELYSTTVSWIRAKVSFAILRSALLCLRGSR 745
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKR-FLGGVIGNGDEKKNYVKEK 189
P GY+P K +LV KP+ E A +F + I TE R LG +G+ + YV K
Sbjct: 387 PDLGYFPNAVKCWLVTKPEKEESARKIFEGTGINITTEGRKHLGAALGSRPHLEQYVDSK 446
Query: 190 VNQWI 194
V++W+
Sbjct: 447 VDEWV 451
>gi|90193535|gb|ABD92360.1| LIM/homeobox protein 6 [Astyanax mexicanus]
Length = 136
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 95/134 (70%), Gaps = 8/134 (5%)
Query: 628 SSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVDGGTTSSDDG 687
+SDWVR+AR + Y LACFAC +CKRQLSTGEEF L E++VLC+ HY +V+ +++ G
Sbjct: 3 ASDWVRRARGNAYRLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMVENLKRAAESG 62
Query: 688 AD--------SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLS 739
+ SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS
Sbjct: 63 SGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLS 122
Query: 740 KRVTQVWFQNSRAR 753
+RV QVWFQN+RAR
Sbjct: 123 RRVIQVWFQNTRAR 136
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 50/75 (66%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TGL
Sbjct: 62 GSGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGL 121
Query: 100 SKRVTQVWFQNSRAR 114
S+RV QVWFQN+RAR
Sbjct: 122 SRRVIQVWFQNTRAR 136
>gi|350579610|ref|XP_003480648.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6-like [Sus
scrofa]
Length = 332
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 97/142 (68%), Gaps = 8/142 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV+QA F +N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQVNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQV 745
PD Q L+++A +TGLS+RV QV
Sbjct: 273 PDAQTLQKLADMTGLSRRVLQV 294
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F +NPD Q L+++A +TG
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQVNNPDAQTLQKLADMTG 286
Query: 99 LSKRVTQV 106
LS+RV QV
Sbjct: 287 LSRRVLQV 294
>gi|431897001|gb|ELK06265.1| LIM/homeobox protein Lhx8 [Pteropus alecto]
Length = 306
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 104/144 (72%), Gaps = 11/144 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 150 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 209
Query: 672 HYLELVD-------GGTTSSDDGA---DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
HY ++D G S +GA + + +H K AKR RT+FT +QLQV+QA F D
Sbjct: 210 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQD 268
Query: 722 SNPDGQDLERIAQITGLSKRVTQV 745
+NPD Q L+++A+ TGLS+RV Q+
Sbjct: 269 NNPDAQTLQKLAERTGLSRRVIQI 292
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
N +G + T+ + +H K AKR RT+FT +QLQV+QA F D+NPD Q L+++A+
Sbjct: 224 NGNGISVEGALLTEQDVNHPKP-AKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAER 282
Query: 97 TGLSKRVTQV 106
TGLS+RV Q+
Sbjct: 283 TGLSRRVIQI 292
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 13 AKRVRTTFTEEQLQVLQANFQLDSNPDG 40
AKR RT+FT +QLQV+QA F D+NPD
Sbjct: 246 AKRARTSFTADQLQVMQAQFAQDNNPDA 273
>gi|110748616|gb|ABG89861.1| Lhx6, partial [Astyanax mexicanus]
Length = 303
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 96/139 (69%), Gaps = 8/139 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 164 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 223
Query: 672 HYLELVDGGTTSSDDGAD--------SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +V+ +++ G+ SE AKR RT+FT EQLQV+QA F D+N
Sbjct: 224 HYDTMVENLKRAAESGSGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 283
Query: 724 PDGQDLERIAQITGLSKRV 742
PD Q L+++A +TGLS+RV
Sbjct: 284 PDAQTLQKLADMTGLSRRV 302
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TGL
Sbjct: 239 GSGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGL 298
Query: 100 SKRV 103
S+RV
Sbjct: 299 SRRV 302
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 40
SE AKR RT+FT EQLQV+QA F D+NPD
Sbjct: 250 SEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 286
>gi|242003798|ref|XP_002422864.1| LIM/homeobox protein Awh, putative [Pediculus humanus corporis]
gi|212505746|gb|EEB10126.1| LIM/homeobox protein Awh, putative [Pediculus humanus corporis]
Length = 227
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 99/163 (60%), Gaps = 21/163 (12%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFA----------------L 662
C C I + ++ + +H C C C+ L F+ L
Sbjct: 10 CVACGDAI-TDKYLLQVNGRSWHSHCLRCSVCQLALDRHPSFSAPNVQSAVVEFQHPIGL 68
Query: 663 HEDRVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
+ + C + LV D G DSE H K+KAKRVRTTFTEEQLQVLQANFQLDS
Sbjct: 69 EKLEITC---IIWLVLLAILVKDKGGDSEGYH-KNKAKRVRTTFTEEQLQVLQANFQLDS 124
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK+K+
Sbjct: 125 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKLKT 167
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/77 (92%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DSE H K+KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ
Sbjct: 92 DSEGYH-KNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 150
Query: 110 NSRARQKKHLHTGKMKS 126
NSRARQKKHLHTGK+K+
Sbjct: 151 NSRARQKKHLHTGKLKT 167
>gi|449677580|ref|XP_004208880.1| PREDICTED: uncharacterized protein LOC101237989 [Hydra
magnipapillata]
Length = 286
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 140/266 (52%), Gaps = 12/266 (4%)
Query: 358 SSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGG 417
+S WLN + + F L+ +FRDAL RYN LK +P C+ CG +VTHAL+CKKGG
Sbjct: 18 ASTWLNALSVENQGFVLNKEEFRDALCFRYNFDLKNVPRICE-CGEPFNVTHALSCKKGG 76
Query: 418 LVKHGHDYLRDECIMMASYAWNGIVKEP---------IMRDSSSTSPALIADFKINGVWE 468
+ HD +R+ + + EP +++ S D K NG W
Sbjct: 77 FISSCHDNIRNLFTTLLKGVCINVQSEPHLIPLDNENFYFHTANKSIQARLDIKANGFWR 136
Query: 469 AGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLR-ASFTPLVCSTDG 527
G TAFFD R+ + ++ S + I ++H +EK +Y+ ++ S TPLV T+G
Sbjct: 137 NGQTAFFDVRVTHVNSMSNKNLDIAAIFRKHKKEKKGEYSERFREVEHGSLTPLVFGTNG 196
Query: 528 ALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTRQ-IVKPYG 586
+ E H F++R+A L+EK + Y V++WLR + F IL++ L LRG+R K
Sbjct: 197 GMGKECHRFVRRLAEKLAEKQNEKYSIVMTWLRTKLSFKILRSTILCLRGSRTPWTKKND 256
Query: 587 FDDGAGLMYIRVRILLKGRLSVLICF 612
F+DG L+ + +K L++++ +
Sbjct: 257 FEDGVDLISRFISNQIKYILNIVVIY 282
>gi|449677197|ref|XP_002158865.2| PREDICTED: uncharacterized protein LOC100197191 [Hydra
magnipapillata]
Length = 397
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 158/327 (48%), Gaps = 23/327 (7%)
Query: 285 HAFAVTSEKCKVLVDS--------LLKQEQLNLQEHNQ-CVKNAINTELVRK---ETEYQ 332
H + V KC ++V S L+ +N+ H + + + + +E +K E +
Sbjct: 61 HGYYVNQSKCWLIVKSDNQAEEAKLIFGNSINITTHRKRHLGDVLGSEAYKKVYCEDLVK 120
Query: 333 EKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLK 392
E+ +I + LP + ++ + + S+WLN +P + DL+ +F+DAL LRYN L
Sbjct: 121 EEVRKIHAGLPENLKLLVEQACDKGVSNWLNTLPIKEQHLDLNKEEFKDALRLRYNMPLA 180
Query: 393 GLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMASYAWNGIVKEPIM----- 447
LP+YC CG + HA++CKKGG + + HD +RD + + + EP +
Sbjct: 181 NLPSYC-ACGEKFDELHAMSCKKGGFICNRHDNIRDLLTVCLNKVCTDVQAEPHLIPLTN 239
Query: 448 ----RDSSSTSPALIADFKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEK 503
+++T+ D K G W G TAFFD R+ + ++ S Q I +RH K
Sbjct: 240 EKFNFKTANTNDEARLDIKAKGFWRKGETAFFDVRVTHVNSKSSKKQPTKHIFRRHEDAK 299
Query: 504 HLKY-NTAAEDLRASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVR 562
+Y E +FTPL+ T+G E F +A LS K + YG V++WLR R
Sbjct: 300 KREYLERVLEVEHGTFTPLIFGTNGWFGDECKRFTALLAQKLSLKMGERYGAVINWLRTR 359
Query: 563 TEFSILKAVSLRLRGTRQIVKPYGFDD 589
I +A L LRG++ + Y DD
Sbjct: 360 LSMEITRASLLCLRGSQTPFRHYNTDD 386
>gi|449681419|ref|XP_002168628.2| PREDICTED: uncharacterized protein LOC100214213 [Hydra
magnipapillata]
Length = 267
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 126/232 (54%), Gaps = 11/232 (4%)
Query: 358 SSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGG 417
+S WLN +P + F L+ +FRDAL LRYN LK +P C+ CG +VTHAL+CKKGG
Sbjct: 13 ASTWLNALPLENQGFVLNKEEFRDALCLRYNFDLKNIPRICE-CGEPFNVTHALSCKKGG 71
Query: 418 LVKHGHDYLRDECIMMASYAWNGIVKEP--IMRD-------SSSTSPALIADFKINGVWE 468
+ HD +R+ + + EP I D +++ S D K NG W
Sbjct: 72 FISSRHDNIRNLFTTLLKRVCINVQSEPHLIPLDNENFYFYTANKSNQARLDIKANGFWR 131
Query: 469 AGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLR-ASFTPLVCSTDG 527
G T+FFD R+ + ++ + + I ++H +EK +Y ++ S TPLV T+G
Sbjct: 132 NGQTSFFDVRVTHVNSMNNKNLDIAAIFRKHEKEKKREYGERVREVEHGSLTPLVFGTNG 191
Query: 528 ALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTR 579
+ E H F++R+A L+EK + Y V++WLR + F I ++ L LRG+R
Sbjct: 192 GMGKECHRFVRRLAEKLAEKQNEKYSVVMTWLRTKLSFEIRRSTILCLRGSR 243
>gi|156405759|ref|XP_001640899.1| predicted protein [Nematostella vectensis]
gi|156228035|gb|EDO48836.1| predicted protein [Nematostella vectensis]
Length = 754
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 164/335 (48%), Gaps = 23/335 (6%)
Query: 271 FGGLGINDPVETAQHAFAVTS------EKCKVLVDS--LLKQEQLNLQEHNQCVKNAINT 322
F G +N V+ +H AV E VD +++ QL + ++ A+ +
Sbjct: 404 FSGTAVNVTVQGQKHLVAVIGSRDYLEEYVNEKVDKWIVVQSHQLPDDSVVKSLQQAVKS 463
Query: 323 ELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFDLSPVQFRDA 382
E R E +++ + + P R L E SS WL V+P ++L+ +FRDA
Sbjct: 464 E--RAEV-LKDRADGVRDEAPRNIHRALDLAAEKGSSVWLKVLPLREMGYNLNKGEFRDA 520
Query: 383 LALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMASYAWNGIV 442
+ LRY+ + +PT C CG + +V HA+ CK+GG + H+ LRD + N +
Sbjct: 521 IKLRYDWPINDIPTTC-VCGDKFTVDHAMICKRGGFISQRHNELRDLEADLLDMVCNDVK 579
Query: 443 KEPIMRD--------SSSTSPALIADFKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNT 494
EP+++D S+T+P D G WE AFFD R+ + +A SY+ +
Sbjct: 580 TEPVLQDITGEQLGRGSNTAPDARLDIHARGFWEPQRAAFFDVRVCHPNAGSYTDLELHQ 639
Query: 495 IAKRHAQEKHLKYNTAAEDL-RASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYG 553
I + EK Y+ + + +FTPLV ++ G + E F R+A +L+ + + Y
Sbjct: 640 IYRNRENEKKRLYSRRVLGVEQGTFTPLVFTSTGGMGKECLRFHSRLAELLAVRKGERYS 699
Query: 554 HVLSWLRVRTEFSILKAVSLRLRGTRQIVKPYGFD 588
+SW+R R F++L++ + LRG+R + YGFD
Sbjct: 700 DTISWIRARVSFALLRSALVCLRGSR--ARNYGFD 732
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 105 QVWFQNSRARQKKHLHTGKMKSSQNR--PKYGYYPEPNKSFLVIKPQFLEEASLLFHDLH 162
Q WF + L K + N P +GY+P K +++ K A +F
Sbjct: 349 QCWFADDACGAGSILEIKKWWDNINTLGPSFGYFPNAKKCWIISKADKEASAREVFSGTA 408
Query: 163 VQIVTE-KRFLGGVIGNGDEKKNYVKEKVNQWI 194
V + + ++ L VIG+ D + YV EKV++WI
Sbjct: 409 VNVTVQGQKHLVAVIGSRDYLEEYVNEKVDKWI 441
>gi|449268603|gb|EMC79459.1| LIM/homeobox protein Lhx6, partial [Columba livia]
Length = 263
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 95/154 (61%), Gaps = 22/154 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SD FAC CKRQLSTGEEF L E++VLC+
Sbjct: 43 FSRFGTKCARCGRQIYASD--------------FACFTCKRQLSTGEEFGLVEEKVLCRI 88
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RTTFT EQLQV+QA F D+N
Sbjct: 89 HYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTTFTAEQLQVMQAQFAQDNN 148
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 149 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 182
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RTTFT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 103 NGNGITLEGAVPSEQDSQPKPAKRARTTFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 162
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 163 LSRRVIQVWFQNCRARHKKH 182
>gi|332229917|ref|XP_003264133.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Nomascus
leucogenys]
Length = 376
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 94/158 (59%), Gaps = 17/158 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDS 722
HY +++ ++++G SE AKR RT+FT EQLQV LQ
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQTAI---- 268
Query: 723 NPDGQDLERIAQITG---LSKRVTQVWFQNSRARQKKH 757
P G R+ + L + QVWFQN RAR KKH
Sbjct: 269 -PPGVSRRRVRLFSARLRLPRLSFQVWFQNCRARHKKH 305
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDSNPDGQDLERIAQIT 97
+G G SE AKR RT+FT EQLQV LQ P G R+ +
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQTAI-----PPGVSRRRVRLFS 281
Query: 98 G---LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
L + QVWFQN RAR KKH + S P
Sbjct: 282 ARLRLPRLSFQVWFQNCRARHKKHTPQHPVPPSGAPP 318
>gi|332229915|ref|XP_003264132.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Nomascus
leucogenys]
Length = 365
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 94/158 (59%), Gaps = 17/158 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 142 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 201
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDS 722
HY +++ ++++G SE AKR RT+FT EQLQV LQ
Sbjct: 202 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQTAI---- 257
Query: 723 NPDGQDLERIAQITG---LSKRVTQVWFQNSRARQKKH 757
P G R+ + L + QVWFQN RAR KKH
Sbjct: 258 -PPGVSRRRVRLFSARLRLPRLSFQVWFQNCRARHKKH 294
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDSNPDGQDLERIAQIT 97
+G G SE AKR RT+FT EQLQV LQ P G R+ +
Sbjct: 216 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQTAI-----PPGVSRRRVRLFS 270
Query: 98 G---LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
L + QVWFQN RAR KKH + S P
Sbjct: 271 ARLRLPRLSFQVWFQNCRARHKKHTPQHPVPPSGAPP 307
>gi|332229919|ref|XP_003264134.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 3 [Nomascus
leucogenys]
Length = 391
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 94/158 (59%), Gaps = 17/158 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDS 722
HY +++ ++++G SE AKR RT+FT EQLQV LQ
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQTAI---- 268
Query: 723 NPDGQDLERIAQITG---LSKRVTQVWFQNSRARQKKH 757
P G R+ + L + QVWFQN RAR KKH
Sbjct: 269 -PPGVSRRRVRLFSARLRLPRLSFQVWFQNCRARHKKH 305
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDSNPDGQDLERIAQIT 97
+G G SE AKR RT+FT EQLQV LQ P G R+ +
Sbjct: 227 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQTAI-----PPGVSRRRVRLFS 281
Query: 98 G---LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
L + QVWFQN RAR KKH + S P
Sbjct: 282 ARLRLPRLSFQVWFQNCRARHKKHTPQHPVPPSGAPP 318
>gi|426362929|ref|XP_004048602.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 2 [Gorilla gorilla
gorilla]
Length = 369
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 95/158 (60%), Gaps = 17/158 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 146 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 205
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDS 722
HY +++ ++++G SE AKR RT+FT EQLQV LQA
Sbjct: 206 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQAAV---- 261
Query: 723 NPDGQDLERI---AQITGLSKRVTQVWFQNSRARQKKH 757
P G R+ + L + QVWFQN RAR KKH
Sbjct: 262 -PPGVSRRRVRLFSSRLRLLRLSFQVWFQNCRARHKKH 298
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDSNPDGQDLERIAQIT 97
+G G SE AKR RT+FT EQLQV LQA P G R+ +
Sbjct: 220 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQAAV-----PPGVSRRRVRLFS 274
Query: 98 GLSKRVT---QVWFQNSRARQKKHLHTGKMKSSQNRP 131
+ + QVWFQN RAR KKH + S P
Sbjct: 275 SRLRLLRLSFQVWFQNCRARHKKHTPQHPVPPSGAPP 311
>gi|426362927|ref|XP_004048601.1| PREDICTED: LIM/homeobox protein Lhx6 isoform 1 [Gorilla gorilla
gorilla]
Length = 384
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 95/158 (60%), Gaps = 17/158 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 146 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 205
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDS 722
HY +++ ++++G SE AKR RT+FT EQLQV LQA
Sbjct: 206 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQAAV---- 261
Query: 723 NPDGQDLERI---AQITGLSKRVTQVWFQNSRARQKKH 757
P G R+ + L + QVWFQN RAR KKH
Sbjct: 262 -PPGVSRRRVRLFSSRLRLLRLSFQVWFQNCRARHKKH 298
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDSNPDGQDLERIAQIT 97
+G G SE AKR RT+FT EQLQV LQA P G R+ +
Sbjct: 220 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPLQAAV-----PPGVSRRRVRLFS 274
Query: 98 GLSKRVT---QVWFQNSRARQKKHLHTGKMKSSQNRP 131
+ + QVWFQN RAR KKH + S P
Sbjct: 275 SRLRLLRLSFQVWFQNCRARHKKHTPQHPVPPSGAPP 311
>gi|355567465|gb|EHH23806.1| hypothetical protein EGK_07356 [Macaca mulatta]
Length = 363
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 89/154 (57%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQLQV
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPXXXXXXXXX 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
+ + L + QVWFQN RAR KKH
Sbjct: 244 XXXXXVRLFSARLRLPRLSFQVWFQNCRARHKKH 277
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 37/93 (39%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV + +
Sbjct: 198 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVPXXXXXXXXXXXXXXVRLFSARLR 257
Query: 99 LSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRP 131
L + QVWFQN RAR KKH + S P
Sbjct: 258 LPRLSFQVWFQNCRARHKKHTPQHPVPPSGAPP 290
>gi|397609703|gb|EJK60485.1| hypothetical protein THAOC_19156 [Thalassiosira oceanica]
Length = 468
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 146/314 (46%), Gaps = 29/314 (9%)
Query: 292 EKCKVLVDSLLKQEQLNLQEHNQCVKNAINT-ELVRKETEYQEKQERILSSLPPAKQRVL 350
E VLV++L LN + H +CV+ A + + R TE +E + K+R L
Sbjct: 100 EASSVLVEALCSGGSLNQKAHRECVRQASKSAKTARLATEKASLEEMKGRATRRDKKR-L 158
Query: 351 TRIVEGQSSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHA 410
RI E + +L V P D +L +FRDA+ LR K LP CDGCG +V HA
Sbjct: 159 ERISE--TGAFLTVRPSRRDGTELQRDKFRDAVLLRMGLVPKNLPKTCDGCGATFTVEHA 216
Query: 411 LNCKKGGLVKHGHDYLRDECIMMASYAWNGIVK------------EPIMRDSSSTSPALI 458
L CK G LV HD RDE +AS A + EP+ R ++ S
Sbjct: 217 LTCKNGRLVVMRHDDCRDEFEDIASKASTTPSRVTTEPLIHYGGNEPVTRQANGASSTSN 276
Query: 459 ------------ADFKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLK 506
+ I+G + TA D I + DAPSY Q + ++ A+ K K
Sbjct: 277 NNNSSTRGGEERGNLAIHGFIQRQKTAILDFVITDTDAPSYGHQPSKKVLEKAAKCKKDK 336
Query: 507 YNTAA-EDLRASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEF 565
Y A E R F P+ S DG E + KR+A +L+ KW + Y + +++ R
Sbjct: 337 YLEACRERRRRDFIPMAYSVDGLAGKEARAAEKRLASLLASKWDRPYSEMACFVKTRMSL 396
Query: 566 SILKAVSLRLRGTR 579
SI++++S+ LRG+R
Sbjct: 397 SIVRSISMLLRGSR 410
>gi|156368935|ref|XP_001627946.1| predicted protein [Nematostella vectensis]
gi|156214910|gb|EDO35883.1| predicted protein [Nematostella vectensis]
Length = 802
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 120/241 (49%), Gaps = 11/241 (4%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKR-FLGGVIGNGDEKKNYVKEK 189
P GY+P K +LV KP+ E A +F + I TE R LG +G+ + YV K
Sbjct: 559 PDLGYFPNAVKCWLVTKPEKEESARKIFEGTGINITTEGRKHLGAALGSRPHLEQYVDSK 618
Query: 190 VNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLV 249
V++W+ V KL+E + PQA+++ T L+ W + R + +D +PL I TL+
Sbjct: 619 VDEWVGQVTKLAEFSVSQPQASYAAYTFGLKHRWTYFLRTLPDIEDLLLPLERAISDTLI 678
Query: 250 PSIFEHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQLNL 309
PS+ + +E +L LP RFGGLGI +P A F +++ C L EQ+
Sbjct: 679 PSLTGRTCTQTERDLLALPVRFGGLGITNPAGEASLEFTASTKVCGPLA------EQIKQ 732
Query: 310 QEHNQCVKNAI---NTELVRKETEY-QEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVI 365
Q H +A+ E R++ EY + + + SSLP R + + +S WL V+
Sbjct: 733 QTHELPCDDAVQEAQQEARREKNEYLKSRCAEVKSSLPVNMLRAVDLATQKGASSWLTVL 792
Query: 366 P 366
P
Sbjct: 793 P 793
>gi|47223723|emb|CAF99332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 381
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 107/217 (49%), Gaps = 67/217 (30%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 100 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACYSCKRQLSTGEEFGLVEEKVLCRI 159
Query: 672 HYLELVD--------------GGTTSSD------------DGADSESSHSKSKAKRVR-- 703
HY +V+ GGT D DS+++ S+ + R
Sbjct: 160 HYDTMVENLKRAAESGERRLRGGTAVPDLLLMDLLVSPSVCPCDSQATGSRWREPSRRNK 219
Query: 704 ------------------------------TTFTEEQLQVLQANFQL-------DSNPDG 726
T + Q+ N Q+ D+NPD
Sbjct: 220 TASPNRPSGLGRPSRRSSYRSGRGFFLQFPTAERPDPSQISAQNMQIMQAQFAQDNNPDA 279
Query: 727 QDLERIAQITGLSKRVTQVWFQNSRARQKKHL--HTG 761
Q L+++A +TGLS+RV QVWFQN RAR KKH H+G
Sbjct: 280 QTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHSG 316
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 65 TTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL--HTG 122
+ + + +Q++QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR KKH H+G
Sbjct: 257 SQISAQNMQIMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHSG 316
>gi|156392672|ref|XP_001636172.1| predicted protein [Nematostella vectensis]
gi|156223272|gb|EDO44109.1| predicted protein [Nematostella vectensis]
Length = 691
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 172/397 (43%), Gaps = 51/397 (12%)
Query: 148 PQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGDEKKNYVKEKVNQWIDCVKKLSEAAKKS 207
PQFLE + H + Q V EKKN+++ K ++K
Sbjct: 316 PQFLEIHGTI-HQFNCQTV--------------EKKNHMQNKT---------FHRGSQKG 351
Query: 208 PQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVPSIFEHEISSSEHELFHL 267
+ + V K + + R + QD PL I + L+P+I +H S E ++ L
Sbjct: 352 GKNSNYTVQKH---RYTYFLRTLPDIQDLLEPLENAISNVLIPAITDHRCSPLERDVLAL 408
Query: 268 PTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQE-QLNLQEHNQCVKNAINTELV- 325
P GGL + +P A + + + LV ++ Q QL + ++ A+ +E
Sbjct: 409 PVHLGGLSMTNPCLEADIELSSSVKATAPLVQQIVVQSHQLPDDSVVKSLQQAVKSERAG 468
Query: 326 ----RKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFDLSPVQFRD 381
R + E Q I +L A E SS WL V+P ++L+ FRD
Sbjct: 469 VLKERADGIRDEAQRNIHCALDLA--------AEKGSSVWLTVLPLREMGYNLNKGGFRD 520
Query: 382 ALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMASYAWNGI 441
A+ LRY+ + +PT C CG + +V HA+ CK+ G + H+ LRD + N +
Sbjct: 521 AIKLRYDWPINDIPTTC-VCGDKFTVDHAMICKRRGFISQRHNELRDLEADLLDMVCNDV 579
Query: 442 VKEPIMRD--------SSSTSPALIADFKINGVWEAGGTAFFDNRIVNADAPSYSSQTWN 493
EP+++D S+T+P D G WE AFFD R+ + +A SY +
Sbjct: 580 KIEPVLQDITGEQLGRGSNTAPDARLDIHARGFWEPQRAAFFDVRVCHPNAGSYRDLELH 639
Query: 494 TIAKRHAQEKHLKYNTAAEDL-RASFTPLVCSTDGAL 529
I H EK Y+ ++ + +F PLV ++ G +
Sbjct: 640 PIYCNHENEKKRLYSRRVLEVEQGTFMPLVFTSTGGI 676
>gi|353230379|emb|CCD76550.1| putative lim/homeobox protein Awh (Protein arrowhead) [Schistosoma
mansoni]
Length = 430
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 90/143 (62%), Gaps = 6/143 (4%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVD 678
C +C + V K +H CF C C RQL G++ + + VLC HY+ D
Sbjct: 18 CGRCRLQVPEDMKVHKLNRVPFHTTCFTCFQCGRQLHQGDKCGIFNNDVLCYEHYIN-GD 76
Query: 679 GGTTSSDDGADSESSHSK-----SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
T +++G +SS S SK+KR+RT+FT +QL +LQANF +++NPDGQ+LERIA
Sbjct: 77 ISMTLTENGHSIDSSTSSNCSIHSKSKRIRTSFTPDQLAILQANFDIEANPDGQELERIA 136
Query: 734 QITGLSKRVTQVWFQNSRARQKK 756
+ L+KRVTQVWFQN+RAR+KK
Sbjct: 137 GMAKLNKRVTQVWFQNARARKKK 159
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 104
S D + S + SK+KR+RT+FT +QL +LQANF +++NPDGQ+LERIA + L+KRVT
Sbjct: 87 SIDSSTSSNCSIHSKSKRIRTSFTPDQLAILQANFDIEANPDGQELERIAGMAKLNKRVT 146
Query: 105 QVWFQNSRARQKK 117
QVWFQN+RAR+KK
Sbjct: 147 QVWFQNARARKKK 159
>gi|256078209|ref|XP_002575389.1| arrowhead [Schistosoma mansoni]
Length = 421
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 90/143 (62%), Gaps = 6/143 (4%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVD 678
C +C + V K +H CF C C RQL G++ + + VLC HY+ D
Sbjct: 9 CGRCRLQVPEDMKVHKLNRVPFHTTCFTCFQCGRQLHQGDKCGIFNNDVLCYEHYIN-GD 67
Query: 679 GGTTSSDDGADSESSHSK-----SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
T +++G +SS S SK+KR+RT+FT +QL +LQANF +++NPDGQ+LERIA
Sbjct: 68 ISMTLTENGHSIDSSTSSNCSIHSKSKRIRTSFTPDQLAILQANFDIEANPDGQELERIA 127
Query: 734 QITGLSKRVTQVWFQNSRARQKK 756
+ L+KRVTQVWFQN+RAR+KK
Sbjct: 128 GMAKLNKRVTQVWFQNARARKKK 150
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 59/73 (80%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 104
S D + S + SK+KR+RT+FT +QL +LQANF +++NPDGQ+LERIA + L+KRVT
Sbjct: 78 SIDSSTSSNCSIHSKSKRIRTSFTPDQLAILQANFDIEANPDGQELERIAGMAKLNKRVT 137
Query: 105 QVWFQNSRARQKK 117
QVWFQN+RAR+KK
Sbjct: 138 QVWFQNARARKKK 150
>gi|157115167|ref|XP_001652548.1| lim homeobox protein [Aedes aegypti]
gi|108876992|gb|EAT41217.1| AAEL007120-PA [Aedes aegypti]
Length = 459
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ +G KC+ C GI + VR+A+D+VYHL CF C C RQL+TG+EF L ED +++CK
Sbjct: 115 FKRYGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEFYLIEDGKLICK 174
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y G SD D ESS+ KR RTT T +QL+ L++ + P E
Sbjct: 175 PDYEAAKAKGLYLSDGSLDGESSN-----KRPRTTITAKQLETLKSAYNSSPKPARHVRE 229
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 230 QLSQDTGLDMRVVQVWFQNRRAKEKR 255
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 57 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
+S KR RTT T +QL+ L++ + P E+++Q TGL RV QVWFQN RA++K
Sbjct: 195 ESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEK 254
Query: 117 K 117
+
Sbjct: 255 R 255
>gi|157127146|ref|XP_001661055.1| lim homeobox protein [Aedes aegypti]
gi|108873020|gb|EAT37245.1| AAEL010744-PA [Aedes aegypti]
Length = 459
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ +G KC+ C GI + VR+A+D+VYHL CF C C RQL+TG+EF L ED +++CK
Sbjct: 115 FKRYGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEFYLIEDGKLICK 174
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y G SD D ESS+ KR RTT T +QL+ L++ + P E
Sbjct: 175 PDYEAAKAKGLYLSDGSLDGESSN-----KRPRTTITAKQLETLKSAYNSSPKPARHVRE 229
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 230 QLSQDTGLDMRVVQVWFQNRRAKEKR 255
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 57 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
+S KR RTT T +QL+ L++ + P E+++Q TGL RV QVWFQN RA++K
Sbjct: 195 ESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEK 254
Query: 117 K 117
+
Sbjct: 255 R 255
>gi|170055943|ref|XP_001863808.1| lim homeobox protein [Culex quinquefasciatus]
gi|167875776|gb|EDS39159.1| lim homeobox protein [Culex quinquefasciatus]
Length = 456
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ +G KC+ C GI + VR+A+D+VYHL CF C C RQL+TG+EF L ED +++CK
Sbjct: 118 FKRYGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEFYLMEDGKLVCK 177
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y G SD D ESS+ KR RTT T +QL+ L++ + P E
Sbjct: 178 PDYEAAKAKGLYLSDGSLDGESSN-----KRPRTTITAKQLETLKSAYNSSPKPARHVRE 232
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 233 QLSQDTGLDMRVVQVWFQNRRAKEKR 258
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 57 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
+S KR RTT T +QL+ L++ + P E+++Q TGL RV QVWFQN RA++K
Sbjct: 198 ESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEK 257
Query: 117 K 117
+
Sbjct: 258 R 258
>gi|158299816|ref|XP_319836.3| AGAP009088-PA [Anopheles gambiae str. PEST]
gi|157013700|gb|EAA14726.3| AGAP009088-PA [Anopheles gambiae str. PEST]
Length = 389
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ +G KC+ C GI + VR+A+D+VYHL CF C C RQL+TG+EF L ED +++CK
Sbjct: 93 FKRYGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEFYLMEDCKLICK 152
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y G SD D ESS+ KR RTT T +QL+ L++ + P E
Sbjct: 153 PDYEAAKAKGLYLSDGSLDGESSN-----KRPRTTITAKQLETLKSAYNSSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
D ESS+ KR RTT T +QL+ L++ + P E+++Q TGL RV QVWFQ
Sbjct: 171 DGESSN-----KRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQ 225
Query: 110 NSRARQKK 117
N RA++K+
Sbjct: 226 NRRAKEKR 233
>gi|312374311|gb|EFR21889.1| hypothetical protein AND_16082 [Anopheles darlingi]
Length = 568
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ +G KC+ C GI + VR+A+D+VYHL CF C C RQL+TG+E+ L ED +++CK
Sbjct: 227 FKRYGTKCAACDLGIPPTQVVRRAQDNVYHLQCFMCSMCSRQLNTGDEYYLMEDCKLICK 286
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y G SD D ESS+ KR RTT T +QL+ L++ + P E
Sbjct: 287 PDYEAAKAKGLYLSDGSLDGESSN-----KRPRTTITAKQLETLKSAYNSSPKPARHVRE 341
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 342 QLSQDTGLDMRVVQVWFQNRRAKEKR 367
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
D ESS+ KR RTT T +QL+ L++ + P E+++Q TGL RV QVWFQ
Sbjct: 305 DGESSN-----KRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQ 359
Query: 110 NSRARQKK 117
N RA++K+
Sbjct: 360 NRRAKEKR 367
>gi|307195463|gb|EFN77349.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 142
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/69 (88%), Positives = 65/69 (94%), Gaps = 2/69 (2%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
SK KRVRTTFTEEQL VLQANFQLDSNPDGQDLERIAQ+TGLSKRVTQVWFQNSRARQKK
Sbjct: 6 SKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRARQKK 65
Query: 118 HLHTGKMKS 126
H+GK+K+
Sbjct: 66 --HSGKIKT 72
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/69 (88%), Positives = 65/69 (94%), Gaps = 2/69 (2%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
SK KRVRTTFTEEQL VLQANFQLDSNPDGQDLERIAQ+TGLSKRVTQVWFQNSRARQKK
Sbjct: 6 SKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRARQKK 65
Query: 757 HLHTGKMKS 765
H+GK+K+
Sbjct: 66 --HSGKIKT 72
>gi|383858395|ref|XP_003704687.1| PREDICTED: LIM/homeobox protein Lhx3-like [Megachile rotundata]
Length = 463
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 17/151 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C +G+A S VR+A++ VYHL CF+C C RQL TG+EF L EDR ++CK
Sbjct: 143 FKRFGTKCAGCGQGLAPSQVVRRAQELVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCK 202
Query: 671 SHY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 203 PDYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNTSPKPA 251
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 252 RHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 282
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 87
L + +L PD A + + D S KR RTT T +QL+ L+ + P
Sbjct: 193 LMEDRKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 252
Query: 88 QDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 253 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 282
>gi|332018435|gb|EGI59029.1| LIM/homeobox protein Lhx3 [Acromyrmex echinatior]
Length = 467
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 17/151 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C +G+A S VR+A++ VYHL CF+C C RQL TG+EF L EDR ++CK
Sbjct: 139 FKRFGTKCAGCGQGLAPSQVVRRAQEFVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCK 198
Query: 671 SHY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 199 PDYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNTSPKPA 247
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 248 RHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 278
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 87
L + +L PD A + + D S KR RTT T +QL+ L+ + P
Sbjct: 189 LMEDRKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 248
Query: 88 QDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 249 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 278
>gi|328782955|ref|XP_394135.3| PREDICTED: LIM/homeobox protein Lhx3 [Apis mellifera]
Length = 442
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 17/151 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C +G+A S VR+A++ +YHL CF+C C RQL TG+EF L EDR ++CK
Sbjct: 143 FKRFGTKCAGCGQGLAPSQVVRRAQELIYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCK 202
Query: 671 SHY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 203 PDYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNTSPKPA 251
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 252 RHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 282
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 87
L + +L PD A + + D S KR RTT T +QL+ L+ + P
Sbjct: 193 LMEDRKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 252
Query: 88 QDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 253 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 282
>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
Length = 402
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 13/146 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C +GI + VR+A+D +YHL CFAC CKRQL+TG+EF L ED +++CK
Sbjct: 93 FRRFGTKCAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCK 152
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
S Y + A + KR RTT T +QL+ L+ +Q P E
Sbjct: 153 SDY------------EAAKQREMELEGTQKRPRTTITAKQLETLKQAYQNSPKPARHVRE 200
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 201 QLSQETGLDMRVVQVWFQNRRAKEKR 226
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
KR RTT T +QL+ L+ +Q P E+++Q TGL RV QVWFQN RA++K
Sbjct: 170 KRPRTTITAKQLETLKQAYQNSPKPARHVREQLSQETGLDMRVVQVWFQNRRAKEK---- 225
Query: 121 TGKMKSSQNRPKYGYY 136
++K R ++G Y
Sbjct: 226 --RLKKDAGRARWGQY 239
>gi|380012090|ref|XP_003690122.1| PREDICTED: LIM/homeobox protein Lhx3-like [Apis florea]
Length = 465
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 17/151 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C +G+A S VR+A++ +YHL CF+C C RQL TG+EF L EDR ++CK
Sbjct: 145 FKRFGTKCAGCGQGLAPSQVVRRAQELIYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCK 204
Query: 671 SHY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 205 PDYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNTSPKPA 253
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 254 RHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 284
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 87
L + +L PD A + + D S KR RTT T +QL+ L+ + P
Sbjct: 195 LMEDRKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 254
Query: 88 QDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 255 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 284
>gi|350418514|ref|XP_003491882.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus impatiens]
Length = 463
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 17/151 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C +G+A S VR+A++ +YHL CF+C C RQL TG+EF L EDR ++CK
Sbjct: 143 FKRFGTKCAGCGQGLAPSQVVRRAQELIYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCK 202
Query: 671 SHY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 203 PDYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNTSPKPA 251
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 252 RHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 282
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 87
L + +L PD A + + D S KR RTT T +QL+ L+ + P
Sbjct: 193 LMEDRKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 252
Query: 88 QDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 253 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 282
>gi|340722532|ref|XP_003399658.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus terrestris]
Length = 486
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 87/150 (58%), Gaps = 17/150 (11%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCKS 671
R FG KC+ C +G+A S VR+A++ +YHL CF+C C RQL TG+EF L EDR ++CK
Sbjct: 167 RRFGTKCAGCGQGLAPSQVVRRAQELIYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCKP 226
Query: 672 HY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 726
Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 227 DYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNTSPKPAR 275
Query: 727 QDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 276 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 305
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 87
L + +L PD A + + D S KR RTT T +QL+ L+ + P
Sbjct: 216 LMEDRKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 275
Query: 88 QDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 276 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 305
>gi|307174398|gb|EFN64917.1| LIM/homeobox protein Lhx3 [Camponotus floridanus]
Length = 467
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 17/151 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C +G+A S VR+A++ VYHL CF+C C RQL TG+EF L EDR ++CK
Sbjct: 139 FKRFGTKCAGCGQGLAPSQVVRRAQELVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCK 198
Query: 671 SHY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 199 PDYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNTSPKPA 247
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 248 RHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 278
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 87
L + +L PD A + + D S KR RTT T +QL+ L+ + P
Sbjct: 189 LMEDRKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 248
Query: 88 QDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 249 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 278
>gi|260793678|ref|XP_002591838.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277049|gb|EEN47849.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 402
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 13/146 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C +GI + VR+A+D +YHL CFAC CKRQL+TG+EF L ED +++CK
Sbjct: 93 FRRFGTKCAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCK 152
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
S Y + A + KR RTT T +QL+ L+ +Q P E
Sbjct: 153 SDY------------EAAKQREMELEGTQKRPRTTITAKQLETLKQAYQNSPKPARHVRE 200
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 201 QLSQETGLDMRVVQVWFQNRRAKEKR 226
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
KR RTT T +QL+ L+ +Q P E+++Q TGL RV QVWFQN RA++K
Sbjct: 170 KRPRTTITAKQLETLKQAYQNSPKPARHVREQLSQETGLDMRVVQVWFQNRRAKEK---- 225
Query: 121 TGKMKSSQNRPKYGYY 136
++K R ++G Y
Sbjct: 226 --RLKKDAGRARWGQY 239
>gi|322793254|gb|EFZ16911.1| hypothetical protein SINV_14186 [Solenopsis invicta]
Length = 392
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 17/151 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C +G+A S VR+A++ VYHL CF+C C RQL TG+EF L EDR ++CK
Sbjct: 58 FKRFGTKCAGCGQGLAPSQVVRRAQEFVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCK 117
Query: 671 SHY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 118 PDYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNTSPKPA 166
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 167 RHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 197
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 87
L + +L PD A + + D S KR RTT T +QL+ L+ + P
Sbjct: 108 LMEDRKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 167
Query: 88 QDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 168 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 197
>gi|307200797|gb|EFN80850.1| LIM/homeobox protein Lhx3 [Harpegnathos saltator]
Length = 421
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 17/151 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C +G++ S VR+A++ VYHL CF+C C RQL TG+EF L EDR ++CK
Sbjct: 140 FKRFGTKCAGCSQGLSPSQVVRRAQELVYHLTCFSCALCSRQLDTGDEFYLMEDRKLVCK 199
Query: 671 SHY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 200 PDYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNTSPKPA 248
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 249 RHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 279
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 87
L + +L PD A + + D S KR RTT T +QL+ L+ + P
Sbjct: 190 LMEDRKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYNTSPKPAR 249
Query: 88 QDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 250 HVREQLSQDTGLDMRVVQVWFQNRRAKEKR 279
>gi|357611533|gb|EHJ67530.1| lim homeobox protein [Danaus plexippus]
Length = 481
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 97/173 (56%), Gaps = 18/173 (10%)
Query: 593 LMYIRVRILLKG----RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLAC 644
L + R +L G R + L C F+ +G KC+ C +GI + VR+A+ HVYHL C
Sbjct: 161 LRCVECRAMLSGKCFARNNQLYCTEDFFKRYGTKCAGCGQGIPPTQVVRRAQAHVYHLRC 220
Query: 645 FACEACKRQLSTGEEFALHED-RVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVR 703
FAC AC R L+TG+EF L ED +++CK Y G S D A S KR R
Sbjct: 221 FACAACARTLNTGDEFYLMEDGKLVCKPDYEAARAKGEGSLDGDAAS---------KRPR 271
Query: 704 TTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
TT T +QL+ L++ + P E++AQ TGL RV QVWFQN RA++K+
Sbjct: 272 TTITAKQLETLKSAYSSSPKPARHVREQLAQDTGLDMRVVQVWFQNRRAKEKR 324
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ +KR RTT T +QL+ L++ + P E++AQ TGL RV QVWFQN RA++K+
Sbjct: 265 AASKRPRTTITAKQLETLKSAYSSSPKPARHVREQLAQDTGLDMRVVQVWFQNRRAKEKR 324
>gi|241716001|ref|XP_002412129.1| arrowhead, putative [Ixodes scapularis]
gi|215505217|gb|EEC14711.1| arrowhead, putative [Ixodes scapularis]
Length = 114
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/72 (81%), Positives = 64/72 (88%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 115
+K+K KRVRTTFTEEQLQVLQANF LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ
Sbjct: 28 AKAKTKRVRTTFTEEQLQVLQANFNLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 87
Query: 116 KKHLHTGKMKSS 127
KK+ + K +
Sbjct: 88 KKYFNNQAKKGT 99
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/72 (81%), Positives = 64/72 (88%)
Query: 695 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
+K+K KRVRTTFTEEQLQVLQANF LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ
Sbjct: 28 AKAKTKRVRTTFTEEQLQVLQANFNLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 87
Query: 755 KKHLHTGKMKSS 766
KK+ + K +
Sbjct: 88 KKYFNNQAKKGT 99
>gi|260793680|ref|XP_002591839.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277050|gb|EEN47850.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 278
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 13/146 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C +GI + VR+A+D +YHL CFAC CKRQL+TG+EF L ED +++CK
Sbjct: 93 FRRFGTKCAGCGQGIPPTQVVRRAQDKIYHLQCFACIMCKRQLATGDEFYLMEDAKLVCK 152
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
S Y + A + KR RTT T +QL+ L+ +Q P E
Sbjct: 153 SDY------------EAAKQREMELEGTQKRPRTTITAKQLETLKQAYQNSPKPARHVRE 200
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 201 QLSQETGLDMRVVQVWFQNRRAKEKR 226
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
KR RTT T +QL+ L+ +Q P E+++Q TGL RV QVWFQN RA++K
Sbjct: 170 KRPRTTITAKQLETLKQAYQNSPKPARHVREQLSQETGLDMRVVQVWFQNRRAKEK---- 225
Query: 121 TGKMKSSQNRPKYGYY 136
++K R ++G Y
Sbjct: 226 --RLKKDAGRARWGQY 239
>gi|351694308|gb|EHA97226.1| LIM/homeobox protein Lhx6 [Heterocephalus glaber]
Length = 294
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 83/154 (53%), Gaps = 40/154 (25%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 102 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 161
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE AKR RT+FT EQL
Sbjct: 162 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQL------------ 209
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
QVWFQN RAR KKH
Sbjct: 210 --------------------QVWFQNCRARHKKH 223
>gi|189238568|ref|XP_969484.2| PREDICTED: similar to LIM homeobox 1b [Tribolium castaneum]
Length = 497
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 12/148 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR +G KC C +GI+ SD VRKARD V+HL CF C C++QLSTGEE + L +++ +CK
Sbjct: 206 FRRYGTKCGGCGQGISPSDLVRKARDKVFHLNCFTCLVCRKQLSTGEELYVLDDNKFICK 265
Query: 671 SHYLELVDGGTT--SSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
YL +G T S DD S + SK + RTT +QL++L+ F P
Sbjct: 266 DDYL---NGNKTNKSPDD------SSAGSKRRGPRTTIKAKQLEILKTAFSQTPKPTRHI 316
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A+ TGL RV QVWFQN R+++++
Sbjct: 317 REQLAKETGLPMRVIQVWFQNKRSKERR 344
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 21 TEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQ 80
T E+L VL N + D + T+ + +SS + SK + RTT +QL++L+ F
Sbjct: 250 TGEELYVLDDN-KFICKDDYLNGNKTNKSPDDSS-AGSKRRGPRTTIKAKQLEILKTAFS 307
Query: 81 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++A+ TGL RV QVWFQN R+++++
Sbjct: 308 QTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR 344
>gi|340386466|ref|XP_003391729.1| PREDICTED: hypothetical protein LOC100641404 [Amphimedon
queenslandica]
Length = 278
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 11/263 (4%)
Query: 337 RILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPT 396
R+ L K+R++ E +S WL+ +P + FDL FRD++ +RY L+ LP+
Sbjct: 2 RVRECLDTDKKRLIDVACERGASAWLSALPLADHGFDLHKGSFRDSVCIRYGWQLQDLPS 61
Query: 397 YCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMASYAWNGIVKEPIMRDSS--STS 454
C C +V HAL+C GG H+ LRD + + + +EP ++ S S +
Sbjct: 62 SC-VCDSPFTVDHALSCPMGGFPTLRHNELRDLTASLLDDVCSNVSREPPLQPLSGESIT 120
Query: 455 PALI------ADFKINGVWEAG-GTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKY 507
+ + AD ++G W AFFD +VN + SY T + K+ K KY
Sbjct: 121 ASTVDGDEARADITVDGFWRISHQRAFFDVSVVNPFSESYKGLTLPAVYKKVENRKKRKY 180
Query: 508 NTAAEDLR-ASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEFS 566
+ ++ F+PL+ ST+G L + KRIA + SEK K Y +++ +R + FS
Sbjct: 181 DARIRNVEHDCFSPLIFSTNGGLAPVSDTVFKRIASITSEKLNKPYSPLINLIRCKLSFS 240
Query: 567 ILKAVSLRLRGTRQIVKPYGFDD 589
IL++ +RGTR+ + F D
Sbjct: 241 ILRSTIRCIRGTRKSLYRPKFGD 263
>gi|242011465|ref|XP_002426470.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
gi|212510582|gb|EEB13732.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
Length = 394
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 94/155 (60%), Gaps = 10/155 (6%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR +G KC C +GI+ SD VRKARD V+HL CF C C++QLSTGEE + L +++ +CK
Sbjct: 85 FRRYGTKCGGCLQGISPSDLVRKARDKVFHLNCFTCMVCRKQLSTGEELYVLDDNKFICK 144
Query: 671 SHYLE------LVDGGTTSSDDGADSES---SHSKSKAKRVRTTFTEEQLQVLQANFQLD 721
YL +DG + D +++S +S SK + RTT +QL++L+ F
Sbjct: 145 EDYLTGKTSSGSLDGDPETRDSQTENKSPDDGNSGSKRRGPRTTIKAKQLEILKNAFSQT 204
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P E++A+ TGL RV QVWFQN R+++++
Sbjct: 205 PKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR 239
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 22 EEQLQVLQANFQLDSNPDGFGADS-TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQ 80
E+ L ++ LD +P+ DS T++ + +S SK + RTT +QL++L+ F
Sbjct: 145 EDYLTGKTSSGSLDGDPET--RDSQTENKSPDDGNSGSKRRGPRTTIKAKQLEILKNAFS 202
Query: 81 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++A+ TGL RV QVWFQN R+++++
Sbjct: 203 QTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR 239
>gi|449478428|ref|XP_002187534.2| PREDICTED: LIM/homeobox protein Lhx3 [Taeniopygia guttata]
Length = 665
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 80 FKRFGTKCAACHQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCK 139
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ ++S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 656 TGEEFALHED-RVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVL 714
TG+EF L ED R++CK Y ++ ++S AKR RTT T +QL+ L
Sbjct: 394 TGDEFYLMEDSRLVCKGDY--------------ETAKQREAESTAKRPRTTITAKQLETL 439
Query: 715 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 440 KNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 481
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 140 ADYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 199
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 200 VWFQNRRAKEK------RLKKDAGRQRWGQY 224
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV QV
Sbjct: 411 DYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQV 470
Query: 107 WFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
WFQN RA++K ++K R ++G Y
Sbjct: 471 WFQNRRAKEK------RLKKDAGRQRWGQY 494
>gi|114627512|ref|XP_001171089.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan troglodytes]
Length = 402
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FRRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|114627514|ref|XP_001171072.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan troglodytes]
Length = 397
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 83 FRRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 143 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 143 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 202
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 203 VWFQNRRAKEK------RLKKDAGRQRWGQY 227
>gi|332833327|ref|XP_003312450.1| PREDICTED: LIM/homeobox protein Lhx3 [Pan troglodytes]
Length = 396
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 82 FRRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 142 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 187
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 188 QLSSETGLDMRVVQVWFQNRRAKEKR 213
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 142 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 201
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 202 VWFQNRRAKEK------RLKKDAGRQRWGQY 226
>gi|196000228|ref|XP_002109982.1| hypothetical protein TRIADDRAFT_14836 [Trichoplax adhaerens]
gi|190588106|gb|EDV28148.1| hypothetical protein TRIADDRAFT_14836, partial [Trichoplax
adhaerens]
Length = 215
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 97/159 (61%), Gaps = 12/159 (7%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
F FG+ KC C GI+ + V KAR++ YH +CF C C R L TGEEFA+ ++ CK
Sbjct: 57 FNRFGSIKCPTCNSGISPKEHVMKAREYAYHCSCFICHTCNRLLKTGEEFAMRGCKLYCK 116
Query: 671 SHYLELVDGG-----TTSSDDGADSESSHSK------SKAKRVRTTFTEEQLQVLQANFQ 719
H+ + + + G + +SS+S ++KR+RT+F + QL+ ++ F
Sbjct: 117 EHFQSITSDHRHSHHSNKDNSGENHDSSNSNDITDEHGRSKRIRTSFKQPQLRTMKTYFA 176
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
L+ NPD +DL++++ TGL+KRV QVWFQN+RA+ ++ +
Sbjct: 177 LNHNPDSKDLKQLSIKTGLNKRVLQVWFQNARAKYRRSI 215
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
Query: 13 AKRVRTTFTEEQLQVLQANFQLD--SNPDGFGA--DSTDHTDSESSHSKSKAKRVRTTFT 68
A R + +E Q + ++ + SN D G DS++ D H +SK R+RT+F
Sbjct: 107 AMRGCKLYCKEHFQSITSDHRHSHHSNKDNSGENHDSSNSNDITDEHGRSK--RIRTSFK 164
Query: 69 EEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
+ QL+ ++ F L+ NPD +DL++++ TGL+KRV QVWFQN+RA+ ++ +
Sbjct: 165 QPQLRTMKTYFALNHNPDSKDLKQLSIKTGLNKRVLQVWFQNARAKYRRSI 215
>gi|391342697|ref|XP_003745652.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 363
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
++ FG KC+ C +GI+ +D VR+AR V+HL CF C C++QLSTGEE + L E+R +CK
Sbjct: 58 YKRFGTKCAGCAQGISPTDLVRRARSKVFHLKCFTCLVCRKQLSTGEELYVLDENRFICK 117
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
YL G+ ++ + K + RTT +QL+ L+A F P E
Sbjct: 118 EDYLNQRQQGSGPESQMNVADDGNGSQKRRGPRTTIKAKQLETLKAAFAATPKPTRHIRE 177
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 QLAQETGLNMRVIQVWFQNRRSKERR 203
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 21 TEEQLQVLQANF------QLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQV 74
T E+L VL N L+ G G +S + + + S+ K + RTT +QL+
Sbjct: 102 TGEELYVLDENRFICKEDYLNQRQQGSGPESQMNVADDGNGSQ-KRRGPRTTIKAKQLET 160
Query: 75 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKYG 134
L+A F P E++AQ TGL+ RV QVWFQN R+++++ + P+
Sbjct: 161 LKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSTLG-----PRRH 215
Query: 135 YYPEPNKSFLVIKP 148
++ P + ++P
Sbjct: 216 FFRSPRRVMRSLRP 229
>gi|344308350|ref|XP_003422840.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Loxodonta africana]
Length = 401
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FRRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNNSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 146 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNNSPKPARHVREQLSSETGLDMRVVQ 205
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 206 VWFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|351701911|gb|EHB04830.1| LIM/homeobox protein Lhx3 [Heterocephalus glaber]
Length = 448
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 134 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 193
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 194 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNASPKPARHVRE 239
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 240 QLSSETGLDMRVVQVWFQNRRAKEKR 265
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 194 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNASPKPARHVREQLSSETGLDMRVVQ 253
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 254 VWFQNRRAKEK------RLKKDAGRQRWGQY 278
>gi|344308352|ref|XP_003422841.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Loxodonta africana]
Length = 403
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FRRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNNSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNNSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|156390719|ref|XP_001635417.1| predicted protein [Nematostella vectensis]
gi|156222511|gb|EDO43354.1| predicted protein [Nematostella vectensis]
Length = 253
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 35/184 (19%)
Query: 608 VLIC----FRSFGAK-CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFAL 662
V++C +R F K CS C + I+S + V +ARD VYH+ CFAC+ CKR L+TGE F +
Sbjct: 55 VILCREDYYRRFSVKKCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGM 114
Query: 663 HEDRVLCKSHYLEL---------------------------VDGGTTSSDDGADSE---S 692
R+ CK Y EL ++ T D +D +
Sbjct: 115 RGIRIYCKEDYEELLREESRNPTKINSLSKGRPRKRRIATAIESITNLGYDLSDRPGELT 174
Query: 693 SHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 752
+ + + KRVRT+F QL+ ++ F ++ NPD +DL++++Q TGL+KRV QVWFQN+RA
Sbjct: 175 TGADGRPKRVRTSFKHHQLRAMKTYFAMNHNPDAKDLKQLSQKTGLTKRVLQVWFQNARA 234
Query: 753 RQKK 756
+ ++
Sbjct: 235 KFRR 238
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%)
Query: 41 FGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLS 100
G D +D ++ + + KRVRT+F QL+ ++ F ++ NPD +DL++++Q TGL+
Sbjct: 162 LGYDLSDRPGELTTGADGRPKRVRTSFKHHQLRAMKTYFAMNHNPDAKDLKQLSQKTGLT 221
Query: 101 KRVTQVWFQNSRARQKK 117
KRV QVWFQN+RA+ ++
Sbjct: 222 KRVLQVWFQNARAKFRR 238
>gi|109109777|ref|XP_001096075.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Macaca mulatta]
Length = 397
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 143 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 143 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 202
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 203 VWFQNRRAKEK------RLKKDAGRQRWGQY 227
>gi|109109779|ref|XP_001096188.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Macaca mulatta]
Length = 402
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|171916111|ref|NP_001116445.1| LIM/homeobox protein Lhx4 [Danio rerio]
Length = 391
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 90/146 (61%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 85 FKRFGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLMEDGRLVCK 144
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L++ ++ P E
Sbjct: 145 EDYE------TAKQND--DSETG-----AKRPRTTITAKQLETLKSAYKNSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L++ ++ P E+++ TGL RV QVWF
Sbjct: 149 TAKQNDDSETGAKRPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWF 208
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 209 QNRRAKEK------RLKKDAGRHRWGQF 230
>gi|410912158|ref|XP_003969557.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Takifugu
rubripes]
Length = 359
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARDHVYH+ CF C C RQL G+EF+L E+ +LC++
Sbjct: 83 RLFGIKCAKCNLGFSSSDLVMRARDHVYHIECFRCSVCSRQLLPGDEFSLREEELLCRAD 142
Query: 673 YLELVDGGTTSS----------------DDGADSESSH------SKSKAKRVRTTFTEEQ 710
+ L++ + S D + +++H K RVRT E+Q
Sbjct: 143 HSILLEKSSAGSPISPGHLHSNRALHLTDPVSMRQATHRNHVHKQSEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|194226030|ref|XP_001918019.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Equus
caballus]
Length = 401
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 146 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 205
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 206 VWFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|403301480|ref|XP_003941417.1| PREDICTED: LIM/homeobox protein Lhx3 [Saimiri boliviensis
boliviensis]
Length = 397
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 143 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 143 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 202
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 203 VWFQNRRAKEK------RLKKDAGRQRWGQY 227
>gi|321464128|gb|EFX75138.1| hypothetical protein DAPPUDRAFT_323670 [Daphnia pulex]
Length = 278
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 90/151 (59%), Gaps = 18/151 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
FR FG KC+ C +GIA S VR+A+ HVYHL CF C C RQL TG+EF L EDR ++CK
Sbjct: 93 FRRFGTKCACCDQGIAPSQIVRRAQHHVYHLECFQCVLCGRQLDTGDEFYLMEDRKLVCK 152
Query: 671 SHYLELVDGGTTSSDDGADSESSH-----SKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
+ Y + A ++ SH ++ KR RTT T +QL+ L++ + P
Sbjct: 153 ADY------------ESAKTKGSHFLELEGENPPKRPRTTITAKQLETLKSAYNASPKPA 200
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 201 RHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 231
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L++ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 175 KRPRTTITAKQLETLKSAYNASPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 231
>gi|148676345|gb|EDL08292.1| mCG18748, isoform CRA_b [Mus musculus]
Length = 402
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|326205258|dbj|BAJ84011.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 386
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 72 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 131
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 132 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 177
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 178 QLSSETGLDMRVVQVWFQNRRAKEKR 203
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 132 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 191
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 192 VWFQNRRAKEK------RLKKDAGRQRWGQY 216
>gi|296191169|ref|XP_002743508.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Callithrix jacchus]
Length = 397
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 143 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 143 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 202
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 203 VWFQNRRAKEK------RLKKDAGRQRWGQY 227
>gi|89001116|ref|NP_001034742.1| LIM/homeobox protein Lhx3 [Mus musculus]
gi|598327|gb|AAB64178.1| homeodomain protein [Mus musculus]
gi|124375774|gb|AAI32557.1| LIM homeobox protein 3 [Mus musculus]
gi|124376794|gb|AAI32555.1| LIM homeobox protein 3 [Mus musculus]
Length = 402
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|402896085|ref|XP_003911138.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Papio anubis]
Length = 397
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 143 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 143 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 202
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 203 VWFQNRRAKEK------RLKKDAGRQRWGQY 227
>gi|30023847|ref|NP_835258.1| LIM/homeobox protein Lhx3 isoform a [Homo sapiens]
gi|12643415|sp|Q9UBR4.2|LHX3_HUMAN RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3
gi|7110143|gb|AAF36808.1|AF156888_1 LIM homeobox protein 3 isoform a [Homo sapiens]
gi|16565927|gb|AAL26314.1| LIM homeobox protein 3 [Homo sapiens]
gi|119608612|gb|EAW88206.1| LIM homeobox 3, isoform CRA_b [Homo sapiens]
gi|326205254|dbj|BAJ84009.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205256|dbj|BAJ84010.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205264|dbj|BAJ84014.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 397
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 143 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 143 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 202
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 203 VWFQNRRAKEK------RLKKDAGRQRWGQY 227
>gi|296191171|ref|XP_002743509.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Callithrix jacchus]
Length = 373
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 59 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 118
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 119 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 164
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 165 QLSSETGLDMRVVQVWFQNRRAKEKR 190
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 119 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 178
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 179 VWFQNRRAKEK------RLKKDAGRQRWGQY 203
>gi|1708829|sp|P50481.1|LHX3_MOUSE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; AltName:
Full=Homeobox protein P-LIM
gi|575517|gb|AAA62369.1| LIM-homeoprotein [Mus musculus]
gi|187956241|gb|AAI50690.1| Lhx3 protein [Mus musculus]
Length = 400
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 146 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 205
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 206 VWFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|308235933|ref|NP_001184116.1| LIM/homeobox protein Lhx3 [Canis lupus familiaris]
gi|300837161|gb|ADK38612.1| LIM homeodomain protein 3 isoform LHX3b [Canis lupus familiaris]
Length = 403
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGPY 232
>gi|348574776|ref|XP_003473166.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Cavia porcellus]
Length = 403
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------EAAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYEAAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|354497582|ref|XP_003510898.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Cricetulus griseus]
gi|344256661|gb|EGW12765.1| LIM/homeobox protein Lhx3 [Cricetulus griseus]
Length = 403
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|296191167|ref|XP_002743507.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Callithrix jacchus]
Length = 402
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|6572499|gb|AAF17291.1| LHX3 protein [Homo sapiens]
gi|6572501|gb|AAF17292.1| LHX3 protein [Homo sapiens]
Length = 370
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 56 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 115
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 116 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 161
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 162 QLSSETGLDMRVVQVWFQNRRAKEKR 187
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 116 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 175
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 176 VWFQNRRAKEK------RLKKDAGRQRWGQY 200
>gi|148676344|gb|EDL08291.1| mCG18748, isoform CRA_a [Mus musculus]
Length = 400
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 146 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 205
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 206 VWFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|395844276|ref|XP_003794888.1| PREDICTED: LIM/homeobox protein Lhx3 [Otolemur garnettii]
Length = 402
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|293345787|ref|XP_001078243.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus norvegicus]
gi|293357700|ref|XP_001059910.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus norvegicus]
gi|149039302|gb|EDL93522.1| rCG45383, isoform CRA_b [Rattus norvegicus]
Length = 402
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|402896087|ref|XP_003911139.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Papio anubis]
Length = 402
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|426222898|ref|XP_004005617.1| PREDICTED: LIM/homeobox protein Lhx3 [Ovis aries]
Length = 401
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV QV
Sbjct: 147 DYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 206
Query: 107 WFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
WFQN RA++K ++K R ++G Y
Sbjct: 207 WFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|402896089|ref|XP_003911140.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Papio anubis]
Length = 373
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 59 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 118
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 119 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 164
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 165 QLSSETGLDMRVVQVWFQNRRAKEKR 190
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 119 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 178
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 179 VWFQNRRAKEK------RLKKDAGRQRWGQY 203
>gi|7657303|ref|NP_055379.1| LIM/homeobox protein Lhx3 isoform b [Homo sapiens]
gi|7110145|gb|AAF36809.1|AF156889_1 LIM homeobox protein 3 isoform b [Homo sapiens]
gi|119608611|gb|EAW88205.1| LIM homeobox 3, isoform CRA_a [Homo sapiens]
gi|157169604|gb|AAI52819.1| LIM homeobox 3 [synthetic construct]
gi|162318656|gb|AAI56736.1| LIM homeobox 3 [synthetic construct]
gi|307685965|dbj|BAJ20913.1| LIM homeobox 3 [synthetic construct]
gi|326205262|dbj|BAJ84013.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 402
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|293345789|ref|XP_002726117.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus norvegicus]
gi|293357702|ref|XP_002729190.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus norvegicus]
gi|149039301|gb|EDL93521.1| rCG45383, isoform CRA_a [Rattus norvegicus]
Length = 400
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 146 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 205
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 206 VWFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|84490413|ref|NP_001033709.1| LIM/homeobox protein Lhx3 [Bos taurus]
gi|62952823|gb|AAY23167.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|62952825|gb|AAY23168.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|296482071|tpg|DAA24186.1| TPA: LIM homeobox protein 3 [Bos taurus]
Length = 403
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|297685716|ref|XP_002820429.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pongo abelii]
Length = 402
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|354497584|ref|XP_003510899.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Cricetulus griseus]
Length = 401
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 146 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 205
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 206 VWFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|25453086|sp|O97581.1|LHX3_PIG RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; AltName:
Full=Homeobox protein P-LIM
gi|4091889|gb|AAC99331.1| LIM homeodomain transcription factor [Sus scrofa]
Length = 383
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 68 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 127
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 128 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 173
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 174 QLSSETGLDMRVVQVWFQNRRAKEKR 199
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 128 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 187
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 188 VWFQNRRAKEK------RLKKDAGRQRWGQY 212
>gi|326923371|ref|XP_003207910.1| PREDICTED: LIM/homeobox protein Lhx3-like [Meleagris gallopavo]
Length = 399
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 84 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCK 143
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ ++S AKR RTT T +QL+ L+ + P E
Sbjct: 144 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 189
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 190 QLSSETGLDMRVVQVWFQNRRAKEKR 215
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 144 ADYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 203
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 204 VWFQNRRAKEK------RLKKDAGRQRWGQY 228
>gi|156398319|ref|XP_001638136.1| predicted protein [Nematostella vectensis]
gi|156225254|gb|EDO46073.1| predicted protein [Nematostella vectensis]
Length = 329
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 23/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC + +D+V +AR+ +YH+ CF C AC RQL G+EFAL ED + CK+
Sbjct: 73 RLFGTKCAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFCKAD 132
Query: 673 YLELVD---------------------GGTTSSDDGADSESSHSKS-KAKRVRTTFTEEQ 710
+ E+V+ GG T+ DS S K+ + RVRT E+Q
Sbjct: 133 H-EIVEKATATAQATHVRNNGQRSSQSGGQTNGQTTPDSTPSKRKTDRPTRVRTVLNEKQ 191
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 192 LHTLRTCYNANPRPDAMMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 237
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 42 GADSTDHTDSESSHSKSKAKR---VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
G + T +S+ SK K R VRT E+QL L+ + + PD E++ ++TG
Sbjct: 159 GGQTNGQTTPDSTPSKRKTDRPTRVRTVLNEKQLHTLRTCYNANPRPDAMMKEQLVEMTG 218
Query: 99 LSKRVTQVWFQNSRARQKK 117
LS RV +VWFQN R + KK
Sbjct: 219 LSPRVIRVWFQNKRCKDKK 237
>gi|432861700|ref|XP_004069695.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oryzias
latipes]
Length = 358
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 21/165 (12%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G SSD V +AR+ VYH+ CF C C R L G+EF+L ED +LC+++
Sbjct: 83 RLFGIKCAKCNTGFCSSDLVMRAREKVYHMECFRCSVCSRHLLPGDEFSLREDELLCRAN 142
Query: 673 Y--LELVDGGTTSSDDGADSESSH-------------------SKSKAKRVRTTFTEEQL 711
+ LE G+ S D + H K RVRT E+QL
Sbjct: 143 HDLLERASAGSPLSPDNLHKRTLHISDPISVRHPSHHRNHVHKQSEKTTRVRTVLNEKQL 202
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 247
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 189 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 247
>gi|395506420|ref|XP_003757530.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Sarcophilus
harrisii]
Length = 403
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CF+C CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ ++S AKR RTT T +QL+ L+ + P E
Sbjct: 148 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV QV
Sbjct: 149 DYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQV 208
Query: 107 WFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
WFQN RA++K ++K R ++G Y
Sbjct: 209 WFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|126302627|ref|XP_001366305.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Monodelphis
domestica]
Length = 403
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CF+C CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ ++S AKR RTT T +QL+ L+ + P E
Sbjct: 148 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 148 ADYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 207
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 208 VWFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|126302625|ref|XP_001366249.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Monodelphis
domestica]
Length = 401
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CF+C CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ ++S AKR RTT T +QL+ L+ + P E
Sbjct: 146 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 146 ADYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 205
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 206 VWFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|397602405|gb|EJK58171.1| hypothetical protein THAOC_21725 [Thalassiosira oceanica]
Length = 330
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 141/309 (45%), Gaps = 30/309 (9%)
Query: 296 VLVDSLLKQEQLNLQEHNQCVKNAINTELVRKETEYQEKQERI--LSSLPPAKQRVLTRI 353
+LV+S+++ E+L++ H + +K E +E +++ I L P+ + L R
Sbjct: 1 MLVESIVRGEKLDMLAHERQMKETRKCE---REVRAMDEESFIFQLGQRKPSLKNRLARA 57
Query: 354 VEGQSSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNC 413
S WL+ IP LS V+FRD + LRY L CDGCG V H L+C
Sbjct: 58 --SNSGTWLSAIPNHLCGNILSAVEFRDNIRLRYGLVPLNLERICDGCGKRADVQHYLSC 115
Query: 414 KKGGLVKHGHDYLRDECIMMASYAWNG--IVKEPIM---------RDSSS-----TSPAL 457
GGL HD L +A A + + +EP R+S++ TSP
Sbjct: 116 PVGGLGILRHDELGRTFATLAKDALSKAYVYREPRTIPSGEQRQDRNSNAAGANATSPQT 175
Query: 458 -------IADFKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTA 510
D + G W G FD R+ + A SY + + + +EK KY
Sbjct: 176 QRREDRTRGDVSVYGFWARGTDCMFDVRVTDTSAKSYRKKDPRKVLETQEKEKKDKYLRK 235
Query: 511 AEDLRASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEFSILKA 570
+ R FTPLV S DG E +K +A +L+EKW++ +G V +++ S+ ++
Sbjct: 236 CLERRKHFTPLVFSVDGMAGREAKKAMKHLASMLAEKWERPHGQVAHFVKTSMAISLCRS 295
Query: 571 VSLRLRGTR 579
V+L LRG R
Sbjct: 296 VTLMLRGGR 304
>gi|780314|gb|AAA73902.1| PLim [Mus musculus]
Length = 400
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV Q
Sbjct: 146 ADYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 205
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 206 VWFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|72535130|ref|NP_001025506.1| LIM/homeobox protein Lhx3 [Gallus gallus]
gi|1708828|sp|P53412.1|LHX3_CHICK RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3
gi|531185|gb|AAA62174.1| amino acid feature: LIM1, bp 82 .. 225; amino acid feature: LIM2,
bp 259 .. 414; amino acid feature: homeodomain, bp 457
.. 636 [Gallus gallus]
Length = 395
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCK 139
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ ++S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 140 ADYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 199
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 200 VWFQNRRAKEK------RLKKDAGRQRWGQY 224
>gi|1708558|sp|P50212.1|ISL2B_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2B; Short=Islet-2B
gi|64209|emb|CAA46102.1| isl-1 [Oncorhynchus tshawytscha]
gi|1094403|prf||2106150A LIM domain homeobox protein
Length = 340
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 87/165 (52%), Gaps = 21/165 (12%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G SSD V +ARD+VYH+ CF C C RQL G+EF+L ++ +LC++
Sbjct: 65 RLFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRQLVPGDEFSLRDEELLCRAD 124
Query: 673 Y---LELVDGGTTSSDDGADSESSH------------------SKSKAKRVRTTFTEEQL 711
+ LE G+ S S S H K RVRT E+QL
Sbjct: 125 HGLLLERASAGSPISPGNILSRSFHIADPVSVRQPPHRNHVHKQSEKTTRVRTVLNEKQL 184
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 185 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 229
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 171 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 229
>gi|395506422|ref|XP_003757531.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Sarcophilus
harrisii]
Length = 401
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CF+C CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ ++S AKR RTT T +QL+ L+ + P E
Sbjct: 146 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV QV
Sbjct: 147 DYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQV 206
Query: 107 WFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
WFQN RA++K ++K R ++G Y
Sbjct: 207 WFQNRRAKEK------RLKKDAGRQRWGQY 230
>gi|170586684|ref|XP_001898109.1| Homeobox protein ceh-14 [Brugia malayi]
gi|158594504|gb|EDP33088.1| Homeobox protein ceh-14, putative [Brugia malayi]
Length = 319
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 85/148 (57%), Gaps = 14/148 (9%)
Query: 611 CFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFAL--HEDRVL 668
C R FG KCS C GI VR+A +HVYH++CF C CKR+L TGEEF L + R++
Sbjct: 69 CLRRFGTKCSMCDEGICPDMVVRRANEHVYHVSCFQCIICKRELRTGEEFYLIPTDGRLV 128
Query: 669 CKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
CKS Y + A S+ + S KR RTT + + L+ L+ +Q S P
Sbjct: 129 CKSDY------------EMAKSKETDIDSNTKRPRTTISAKSLETLKQAYQASSKPARHV 176
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 177 REQLAADTGLDMRVVQVWFQNRRAKEKR 204
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 49 TDSESSHSK-----SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRV 103
+D E + SK S KR RTT + + L+ L+ +Q S P E++A TGL RV
Sbjct: 131 SDYEMAKSKETDIDSNTKRPRTTISAKSLETLKQAYQASSKPARHVREQLAADTGLDMRV 190
Query: 104 TQVWFQNSRARQKK 117
QVWFQN RA++K+
Sbjct: 191 VQVWFQNRRAKEKR 204
>gi|335295820|ref|XP_003357609.1| PREDICTED: LIM/homeobox protein Lhx4-like [Sus scrofa]
Length = 390
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLPCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|149691761|ref|XP_001490268.1| PREDICTED: insulin gene enhancer protein ISL-2 [Equus caballus]
Length = 359
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 92/166 (55%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D GA ++S H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPDPGAGRQASLRPHVHKQTEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|390335971|ref|XP_780701.3| PREDICTED: LIM/homeobox protein Lhx3-like [Strongylocentrotus
purpuratus]
Length = 545
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 13/146 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KCS C +GIA ++ VR+A D+VYHL CF C C RQLSTG+EF L D +++CK
Sbjct: 199 FKRFGTKCSSCEKGIAPTEIVRRALDNVYHLHCFCCIICTRQLSTGDEFFLMTDNKLVCK 258
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y + A + + KR RTT T +QL+ L+ + P E
Sbjct: 259 QDY------------EAAKARELEMDNSNKRPRTTITAKQLETLKTAYSNSPKPARHVRE 306
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++AQ TGL RV QVWFQN RA++K+
Sbjct: 307 QLAQETGLDMRVVQVWFQNRRAKEKR 332
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 22/113 (19%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
KR RTT T +QL+ L+ + P E++AQ TGL RV QVWFQN RA++K
Sbjct: 276 KRPRTTITAKQLETLKTAYSNSPKPARHVREQLAQETGLDMRVVQVWFQNRRAKEK---- 331
Query: 121 TGKMKSSQNRPKYGYY----------------PEPNKSFLVIKPQFLEEASLL 157
++K NR ++G+Y PEP S + ++P L++ ++
Sbjct: 332 --RLKKDANRQRWGHYFRNIKRVNEASSPASGPEPLASPVKLEPSDLDDTTVF 382
>gi|327270281|ref|XP_003219918.1| PREDICTED: LIM/homeobox protein Lhx4-like [Anolis carolinensis]
Length = 449
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 141 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 200
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 201 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 247
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 248 QLSSETGLDMRVVQVWFQNRRAKEKR 273
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 205 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 264
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 265 QNRRAKEK------RLKKDAGRHRWGQF 286
>gi|291397314|ref|XP_002715058.1| PREDICTED: LIM homeobox protein 4 [Oryctolagus cuniculus]
Length = 390
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|432856246|ref|XP_004068425.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oryzias latipes]
Length = 389
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 90/146 (61%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
VD T +D DSE+ KR RTT T +QL+ L++ ++ P E
Sbjct: 143 ------VDYETAKQND--DSEAG-----TKRPRTTITAKQLETLKSAYKNSPKPARHVRE 189
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 190 QLSSETGLDMRVVQVWFQNRRAKEKR 215
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ KR RTT T +QL+ L++ ++ P E+++ TGL RV QVWF
Sbjct: 147 TAKQNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWF 206
Query: 109 QNSRARQKK 117
QN RA++K+
Sbjct: 207 QNRRAKEKR 215
>gi|348504454|ref|XP_003439776.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oreochromis niloticus]
Length = 387
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y A ++ S++ KR RTT T +QL+ L++ ++ P E
Sbjct: 143 VDYE-------------AAKQNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHVRE 189
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 190 QLSSETGLDMRVVQVWFQNRRAKEKR 215
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 52 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 111
++ S++ KR RTT T +QL+ L++ ++ P E+++ TGL RV QVWFQN
Sbjct: 150 QNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNR 209
Query: 112 RARQKK 117
RA++K+
Sbjct: 210 RAKEKR 215
>gi|157820803|ref|NP_001101818.1| LIM/homeobox protein Lhx4 [Rattus norvegicus]
gi|149058350|gb|EDM09507.1| LIM homeobox protein 4 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 329
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 21 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 80
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 81 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 127
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 128 QLSSETGLDMRVVQVWFQNRRAKEKR 153
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 85 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 144
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 145 QNRRAKEK------RLKKDAGRHRWGQF 166
>gi|120537751|gb|AAI29375.1| Lhx4 protein [Danio rerio]
Length = 244
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 90/146 (61%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLMEDGRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L++ ++ P E
Sbjct: 143 EDY------ETAKQND--DSETG-----AKRPRTTITAKQLETLKSAYKNSPKPARHVRE 189
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 190 QLSSETGLDMRVVQVWFQNRRAKEKR 215
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L++ ++ P E+++ TGL RV QVWF
Sbjct: 147 TAKQNDDSETGAKRPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWF 206
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 207 QNRRAKEK------RLKKDAGRHRWGQF 228
>gi|259013380|ref|NP_001158395.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
gi|90659991|gb|ABD97272.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
Length = 390
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 8/146 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KCS C +GI + VR+A+D+VYHL CFAC C RQL+TG+EF L D +++CK
Sbjct: 87 FKRFGTKCSACDQGIPPTQVVRRAQDNVYHLQCFACVMCNRQLATGDEFYLMNDNKLVCK 146
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y G T SD D+ + KR RTT + +QL+ L+ + P E
Sbjct: 147 GDYEAAKVRGGTDSDLEMDASN-------KRPRTTISAKQLETLKTAYANSPKPARHVRE 199
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 200 QLSSETGLDMRVVQVWFQNRRAKEKR 225
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
TDS+ S KR RTT + +QL+ L+ + P E+++ TGL RV QVWF
Sbjct: 158 TDSDLEMDASN-KRPRTTISAKQLETLKTAYANSPKPARHVREQLSSETGLDMRVVQVWF 216
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K NR ++ Y
Sbjct: 217 QNRRAKEK------RLKKDANRQRWSQY 238
>gi|148707455|gb|EDL39402.1| LIM homeobox protein 4, isoform CRA_a [Mus musculus]
Length = 329
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 21 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 80
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 81 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 127
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 128 QLSSETGLDMRVVQVWFQNRRAKEKR 153
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 85 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 144
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 145 QNRRAKEK------RLKKDAGRHRWGQF 166
>gi|395824959|ref|XP_003785717.1| PREDICTED: LIM/homeobox protein Lhx4 [Otolemur garnettii]
Length = 390
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACVICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|432852914|ref|XP_004067448.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oryzias
latipes]
Length = 284
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 89/169 (52%), Gaps = 23/169 (13%)
Query: 611 CFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
C R FG KC+KC G +SSD V +ARD+VYH+ CF C C RQL G+EF+L E +LC+
Sbjct: 27 CCRLFGIKCAKCNLGFSSSDLVMRARDNVYHIECFRCSMCSRQLLPGDEFSLQEGDLLCR 86
Query: 671 ---SHYLELVDGGT--------------TSSDDGADSESSH------SKSKAKRVRTTFT 707
S LE G+ ++D ++ H K RVRT
Sbjct: 87 ADHSMLLERTSAGSPISPGHIHSNRPLHMAADPVTVRQAPHRNHVHKQSEKTTRVRTVLN 146
Query: 708 EEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 147 EKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 195
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 137 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 195
>gi|348578364|ref|XP_003474953.1| PREDICTED: LIM/homeobox protein Lhx4 [Cavia porcellus]
Length = 390
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|229619792|dbj|BAH58094.1| LIM homeobox protein 3 [Hemicentrotus pulcherrimus]
Length = 485
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 13/146 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KCS C +GIA ++ VR+A D+VYHL CF C C RQLSTG+EF L D +++CK
Sbjct: 139 FKRFGTKCSSCEKGIAPTEIVRRALDNVYHLHCFCCIICTRQLSTGDEFFLMTDNKLVCK 198
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y + A + + KR RTT T +QL+ L+ + P E
Sbjct: 199 QDY------------EAAKARELEMDNSNKRPRTTITAKQLETLKTAYSNSPKPARHVRE 246
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++AQ TGL RV QVWFQN RA++K+
Sbjct: 247 QLAQETGLDMRVVQVWFQNRRAKEKR 272
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 22/113 (19%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
KR RTT T +QL+ L+ + P E++AQ TGL RV QVWFQN RA++K
Sbjct: 216 KRPRTTITAKQLETLKTAYSNSPKPARHVREQLAQETGLDMRVVQVWFQNRRAKEK---- 271
Query: 121 TGKMKSSQNRPKYGYY----------------PEPNKSFLVIKPQFLEEASLL 157
++K NR ++G+Y PEP S + ++P L++ ++
Sbjct: 272 --RLKKDANRQRWGHYFRNIKRVNEASSPASGPEPLASPVKLEPSDLDDTTVF 322
>gi|1708562|sp|P53410.1|ISL2_CHICK RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531181|gb|AAA62172.1| sequence encoding 37 predicted 5' amino acids has not been
determined, partial [Gallus gallus]
Length = 319
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C +SSD V +ARDHVYHL CF C AC RQL G++F L E +LC++
Sbjct: 46 RLFGIKCAQCRAAFSSSDLVMRARDHVYHLECFRCAACGRQLLPGDQFCLRERDLLCRAD 105
Query: 673 YLELVDGGTTSSDDGADSESSH------------------SKSKAKRVRTTFTEEQLQVL 714
+ DG +H + K RVRT E+QL L
Sbjct: 106 HGPPPDGAAARGPRSPAPPPAHLAEPVPGRPPGPRPQSHKAAEKTTRVRTVLNEKQLHTL 165
Query: 715 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 166 RTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 207
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 52 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 111
+S + K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN
Sbjct: 142 QSHKAAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNK 201
Query: 112 RARQKK 117
R + KK
Sbjct: 202 RCKDKK 207
>gi|351699208|gb|EHB02127.1| LIM/homeobox protein Lhx4 [Heterocephalus glaber]
Length = 390
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|47225812|emb|CAF98292.1| unnamed protein product [Tetraodon nigroviridis]
Length = 360
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 86/166 (51%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G SSD V +ARD+VYH+ CF C C R L G+EF+L ED +LC++
Sbjct: 83 RIFGIKCAKCNVGFCSSDLVMRARDNVYHMECFRCSVCCRHLLPGDEFSLREDELLCRAD 142
Query: 673 Y---LELVDGGTTSSDDGADSESSH-------------------SKSKAKRVRTTFTEEQ 710
+ +E G+ S S H K R+RT TE+Q
Sbjct: 143 HCLLMERASAGSPLSPGPIHSRPLHISDAVSVRHPPHHRNHVHKQSEKTTRIRTVLTEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYNANPRPDALMKEQLVEMTGLSPRVVRVWFQNKRCKDKK 248
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K R+RT TE+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRIRTVLTEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVVRVWFQNKRCKDKK 248
>gi|157412000|gb|ABV54626.1| Lim homeobox protein 3 splice variant [Salmo salar]
Length = 379
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 64 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 123
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 124 ADY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 169
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 170 QLSSETGLDMRVVQVWFQNRRAKEKR 195
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 124 ADYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 183
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 184 VWFQNRRAKEK------RLKKDAGRQRWGQY 208
>gi|297662584|ref|XP_002809779.1| PREDICTED: LIM/homeobox protein Lhx4 [Pongo abelii]
Length = 390
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|431915961|gb|ELK16215.1| LIM/homeobox protein Lhx4 [Pteropus alecto]
Length = 329
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 21 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCK 80
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 81 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 127
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 128 QLSSETGLDMRVVQVWFQNRRAKEKR 153
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 85 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 144
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 145 QNRRAKEK------RLKKDAGRHRWGQF 166
>gi|402857943|ref|XP_003893495.1| PREDICTED: LIM/homeobox protein Lhx4 [Papio anubis]
gi|355558975|gb|EHH15755.1| hypothetical protein EGK_01889 [Macaca mulatta]
Length = 390
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|354475897|ref|XP_003500163.1| PREDICTED: LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 390
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|426332930|ref|XP_004028045.1| PREDICTED: LIM/homeobox protein Lhx4 [Gorilla gorilla gorilla]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|18026224|gb|AAL07260.1| LIM homeodomain protein [Homo sapiens]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|73960401|ref|XP_547420.2| PREDICTED: LIM/homeobox protein Lhx4 isoform 1 [Canis lupus
familiaris]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|15375314|ref|NP_203129.1| LIM/homeobox protein Lhx4 [Homo sapiens]
gi|209572644|sp|Q969G2.2|LHX4_HUMAN RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox protein
4
gi|14599448|gb|AAK70923.1|AF179849_1 LIM homeobox protein 4 [Homo sapiens]
gi|22094433|gb|AAM91896.1|AF405430_1 LIM homeobox protein 4 [Homo sapiens]
gi|15079940|gb|AAH11759.1| LIM homeobox 4 [Homo sapiens]
gi|123988108|gb|ABM83830.1| LIM homeobox 4 [synthetic construct]
gi|123999145|gb|ABM87154.1| LIM homeobox 4 [synthetic construct]
gi|261861646|dbj|BAI47345.1| LIM homeobox 4 [synthetic construct]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|348535047|ref|XP_003455013.1| PREDICTED: LIM/homeobox protein Lhx3-like [Oreochromis niloticus]
Length = 400
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 139
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 140 ADYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 199
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 200 VWFQNRRAKEK------RLKKDAGRQRWGQY 224
>gi|410986072|ref|XP_003999336.1| PREDICTED: LIM/homeobox protein Lhx4 [Felis catus]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|397508667|ref|XP_003824769.1| PREDICTED: LIM/homeobox protein Lhx4 [Pan paniscus]
gi|410034179|ref|XP_524984.3| PREDICTED: LIM/homeobox protein Lhx4 [Pan troglodytes]
Length = 466
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 158 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 217
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 218 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 264
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 265 QLSSETGLDMRVVQVWFQNRRAKEKR 290
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 222 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 281
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 282 QNRRAKEK------RLKKDAGRHRWGQF 303
>gi|29437129|gb|AAH49834.1| Lhx4 protein [Mus musculus]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|344278250|ref|XP_003410909.1| PREDICTED: LIM/homeobox protein Lhx4-like [Loxodonta africana]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|194210370|ref|XP_001914860.1| PREDICTED: LIM/homeobox protein Lhx4-like [Equus caballus]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|119611484|gb|EAW91078.1| LIM homeobox 4 [Homo sapiens]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|432115998|gb|ELK37137.1| LIM/homeobox protein Lhx4 [Myotis davidii]
Length = 389
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 81 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 140
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 141 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 187
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 188 QLSSETGLDMRVVQVWFQNRRAKEKR 213
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 145 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 204
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 205 QNRRAKEK------RLKKDAGRHRWGQF 226
>gi|211971017|ref|NP_001130018.1| LIM/homeobox protein Lhx3 [Salmo salar]
gi|157412002|gb|ABV54627.1| Lim homeobox protein 3 [Salmo salar]
Length = 395
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 139
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 140 ADYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 199
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 200 VWFQNRRAKEK------RLKKDAGRQRWGQY 224
>gi|190336903|gb|AAI62627.1| LIM homeobox 3 [Danio rerio]
Length = 398
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 139
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSTETGLDMRVVQVWFQNRRAKEKR 211
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 140 ADYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQ 199
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 200 VWFQNRRAKEK------RLKKDAGRQRWGQY 224
>gi|190684642|ref|NP_034842.2| LIM/homeobox protein Lhx4 [Mus musculus]
gi|209572773|sp|P53776.4|LHX4_MOUSE RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox protein
4
gi|148707456|gb|EDL39403.1| LIM homeobox protein 4, isoform CRA_b [Mus musculus]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|426239972|ref|XP_004013890.1| PREDICTED: LIM/homeobox protein Lhx4 [Ovis aries]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|403266388|ref|XP_003925368.1| PREDICTED: LIM/homeobox protein Lhx4 [Saimiri boliviensis
boliviensis]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICTRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|327291516|ref|XP_003230467.1| PREDICTED: LIM/homeobox protein Lhx3-like, partial [Anolis
carolinensis]
Length = 314
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 15/143 (10%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCKSHY 673
FG KC+ C +GI + VR+A+D VYHL CF+C CKRQL+TG+EF L ED R++CK+ Y
Sbjct: 2 FGTKCAACQQGIPPTQVVRRAQDFVYHLHCFSCIVCKRQLATGDEFYLMEDSRLVCKADY 61
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
++ ++S AKR RTT T +QL+ L++ + P E+++
Sbjct: 62 --------------ETAKQREAESTAKRPRTTITAKQLETLKSAYNNSPKPARHVREQLS 107
Query: 734 QITGLSKRVTQVWFQNSRARQKK 756
TGL RV QVWFQN RA++K+
Sbjct: 108 SETGLDMRVVQVWFQNRRAKEKR 130
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D+ ++ ++S AKR RTT T +QL+ L++ + P E+++ TGL RV QV
Sbjct: 60 DYETAKQREAESTAKRPRTTITAKQLETLKSAYNNSPKPARHVREQLSSETGLDMRVVQV 119
Query: 107 WFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
WFQN RA++K ++K R ++G Y
Sbjct: 120 WFQNRRAKEK------RLKKDAGRQRWGQY 143
>gi|300795912|ref|NP_001179714.1| LIM/homeobox protein Lhx4 [Bos taurus]
gi|296479119|tpg|DAA21234.1| TPA: LIM homeobox 4 [Bos taurus]
gi|440901216|gb|ELR52198.1| LIM/homeobox protein Lhx4 [Bos grunniens mutus]
Length = 390
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|9971753|gb|AAG10399.1| lim-homeobox transcription factor LHX3 [Homo sapiens]
Length = 397
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG++F L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDDFYLMEDSRLVCK 147
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ +++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D+ ++ +++ AKR RTT T +QL+ L++ + P E+++ TGL RV QV
Sbjct: 149 DYETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQV 208
Query: 107 WFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
WFQN RA++K ++K R ++G Y
Sbjct: 209 WFQNRRAKEK------RLKKDAGRQRWGQY 232
>gi|18858975|ref|NP_571283.1| LIM/homeobox protein Lhx3 [Danio rerio]
gi|2497671|sp|Q90421.1|LHX3_DANRE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3
gi|1000342|gb|AAA76714.1| LIM homeobox protein [Danio rerio]
Length = 398
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 139
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSTETGLDMRVVQVWFQNRRAKEKR 211
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 140 ADYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQ 199
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 200 VWFQNRRAKEK------RLKKDAGRQRWGQY 224
>gi|296229653|ref|XP_002760359.1| PREDICTED: LIM/homeobox protein Lhx4 [Callithrix jacchus]
Length = 390
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICTRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|410903464|ref|XP_003965213.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 3 [Takifugu
rubripes]
Length = 390
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 71 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 130
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 131 TDY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 176
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 177 QLSSETGLDMRVVQVWFQNRRAKEKR 202
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
TD+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 131 TDYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 190
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 191 VWFQNRRAKEK------RLKKDAGRQRWGQY 215
>gi|410903462|ref|XP_003965212.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Takifugu
rubripes]
Length = 406
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 87 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 146
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 147 TDY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 192
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 193 QLSSETGLDMRVVQVWFQNRRAKEKR 218
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
TD+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 147 TDYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 206
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 207 VWFQNRRAKEK------RLKKDAGRQRWGQY 231
>gi|291407015|ref|XP_002719805.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 402
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARGKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKEAANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 48 HTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 107
+ ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV QVW
Sbjct: 168 NNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVW 227
Query: 108 FQNSRARQKK 117
FQN R+++++
Sbjct: 228 FQNRRSKERR 237
>gi|47218680|emb|CAG12404.1| unnamed protein product [Tetraodon nigroviridis]
Length = 444
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 57 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 116
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 117 TDY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 162
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 163 QLSSETGLDMRVVQVWFQNRRAKEKR 188
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
TD+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 117 TDYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 176
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 177 VWFQNRRAKEK------RLKKDAGRQRWGQY 201
>gi|410908008|ref|XP_003967483.1| PREDICTED: insulin gene enhancer protein ISL-2A-like [Takifugu
rubripes]
Length = 359
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G SSD V +ARD VYH+ CF C C R L G+EF+L ED +LC++
Sbjct: 83 RLFGIKCAKCNMGFCSSDLVMRARDSVYHMECFRCSVCCRHLLPGDEFSLREDELLCRAD 142
Query: 673 Y---LELVDGGTTSSDDGADSESSH-------------------SKSKAKRVRTTFTEEQ 710
+ +E G+ S S H K R+RT TE+Q
Sbjct: 143 HCLLMERASAGSPLSPGTIHSRPLHISDAVTVRHPPHHRNHGHKQSEKTTRIRTVLTEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYNANPRPDALMKEQLVEMTGLSPRVVRVWFQNKRCKDKK 248
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K R+RT TE+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRIRTVLTEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVVRVWFQNKRCKDKK 248
>gi|149058349|gb|EDM09506.1| LIM homeobox protein 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 376
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 68 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 127
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 128 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 174
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 175 QLSSETGLDMRVVQVWFQNRRAKEKR 200
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 132 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 191
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 192 QNRRAKEK------RLKKDAGRHRWGQF 213
>gi|410921498|ref|XP_003974220.1| PREDICTED: LIM/homeobox protein Lhx4-like [Takifugu rubripes]
Length = 389
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCASCQQGIPPMQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y A ++ S++ KR RTT T +QL+ L++ ++ P E
Sbjct: 143 VDY-------------EAAKQNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHVRE 189
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 190 QLSSETGLDMRVVQVWFQNRRAKEKR 215
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 52 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 111
++ S++ KR RTT T +QL+ L++ ++ P E+++ TGL RV QVWFQN
Sbjct: 150 QNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNR 209
Query: 112 RARQKK 117
RA++K+
Sbjct: 210 RAKEKR 215
>gi|195164562|ref|XP_002023115.1| GL21181 [Drosophila persimilis]
gi|194105200|gb|EDW27243.1| GL21181 [Drosophila persimilis]
Length = 436
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 11/146 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+DHVYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 100 FKRYGTKCSACDMGIPPTQVVRRAQDHVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 159
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D + KR RTT T +QL+ L+ + P E
Sbjct: 160 RDYEEAKAKGLYLDGDQPN----------KRPRTTITAKQLETLKTAYNNSPKPARHVRE 209
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 210 QLSQDTGLDMRVVQVWFQNRRAKEKR 235
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 179 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 235
>gi|410903460|ref|XP_003965211.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Takifugu
rubripes]
Length = 399
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 139
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 140 TDY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
TD+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 140 TDYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 199
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 200 VWFQNRRAKEK------RLKKDAGRQRWGQY 224
>gi|148232304|ref|NP_001081623.1| LIM/homeobox protein Lhx3 [Xenopus laevis]
gi|547856|sp|P36200.1|LHX3_XENLA RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; Short=xLIM-3
gi|407072|emb|CAA80402.1| Xlim-3 [Xenopus laevis]
gi|213623314|gb|AAI69580.1| Xlim-3 protein [Xenopus laevis]
Length = 395
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A++ VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCK 139
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ ++S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV QV
Sbjct: 141 DYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQV 200
Query: 107 WFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
WFQN RA++K ++K R ++G Y
Sbjct: 201 WFQNRRAKEK------RLKKDAGRQRWGQY 224
>gi|74187870|dbj|BAE24561.1| unnamed protein product [Mus musculus]
Length = 406
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL--------ELVDGGTTSS-------------DDGADSESSHSKSK----------- 698
YL ++ TT S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLNSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSVAKENSLNSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|215276334|gb|ACJ65031.1| LHX9 [Xenopus laevis]
Length = 399
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGAK-CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F K C++C GI++S+ V +AR+ VYHL+CF C C + LSTG++F + E+ V C+
Sbjct: 127 YRRFSVKRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDQFGMKENLVYCR 186
Query: 671 SHYLELVDG--------------------------------------------------- 679
H+ LV G
Sbjct: 187 IHFELLVQGDFHQQLNYTELSAKGGGIAALPYFSNGTGTVQKGRPRKRKSPALGVDIMNY 246
Query: 680 --GTTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G ++ D + ++ S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 247 SSGCNENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 306
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 307 GLTKRVLQVWFQNARAKFRRNL 328
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL
Sbjct: 249 GCNENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGL 308
Query: 100 SKRVTQVWFQNSRARQKKHL 119
+KRV QVWFQN+RA+ +++L
Sbjct: 309 TKRVLQVWFQNARAKFRRNL 328
>gi|4809173|gb|AAD30125.1|AF135415_1 LIM-homeobox protein [Mus musculus]
Length = 367
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 59 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 118
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 119 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 165
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 166 QLSSETGLDMRVVQVWFQNRRAKEKR 191
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 123 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 182
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 183 QNRRAKEK------RLKKDAGRHRWGQF 204
>gi|45382269|ref|NP_990744.1| LIM/homeobox protein Lhx1 [Gallus gallus]
gi|1708826|sp|P53411.1|LHX1_CHICK RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|531183|gb|AAA62173.1| amino acid feature: homeodomain, bp 674 .. 853; amino acid feature:
LIM2, bp 326 .. 481; amino acid feature: LIM1, bp 149
..292 [Gallus gallus]
Length = 406
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLNNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 142 SPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 201
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 202 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|14579221|gb|AAK69169.1|AF282899_1 LIM homeobox protein [Homo sapiens]
gi|15146348|dbj|BAB62817.1| LIM homeobox 4 [Homo sapiens]
Length = 367
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 59 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 118
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 119 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 165
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 166 QLSSETGLDMRVVQVWFQNRRAKEKR 191
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 123 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 182
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 183 QNRRAKEK------RLKKDAGRHRWGQF 204
>gi|195164566|ref|XP_002023117.1| GL21131 [Drosophila persimilis]
gi|194105202|gb|EDW27245.1| GL21131 [Drosophila persimilis]
Length = 490
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+DHVYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 150 FKRYGTKCSACDMGIPPTQVVRRAQDHVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 209
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 210 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 263
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 264 QLSQDTGLDMRVVQVWFQNRRAKEKR 289
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 233 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 289
>gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/homeobox protein Lhx5-like [Loxodonta africana]
Length = 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|156120769|ref|NP_001095531.1| LIM/homeobox protein Lhx5 [Bos taurus]
gi|151557071|gb|AAI50044.1| LHX5 protein [Bos taurus]
gi|296478515|tpg|DAA20630.1| TPA: LIM homeobox protein 5 [Bos taurus]
Length = 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|260829945|ref|XP_002609922.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
gi|229295284|gb|EEN65932.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
Length = 430
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 25/179 (13%)
Query: 603 KGRLSVLICF-RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFA 661
+G+ C+ R FG KC+KC G +D+V +AR+ +YH+ CF C AC RQL G+EFA
Sbjct: 71 EGKTYCKRCYVRLFGTKCAKCSLGFTKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFA 130
Query: 662 LHEDRVLCKSHYLEL------VDGGTTSSDDGADSE-----SSHSKS------------- 697
L ED + CK+ + L VD +S D E SH +S
Sbjct: 131 LREDGLFCKADHEVLERASNNVDSNGRASLGSTDLEMATRPESHGRSDQRRPQVHKQDGH 190
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
>gi|431920332|gb|ELK18367.1| Insulin protein enhancer protein ISL-2 [Pteropus alecto]
Length = 306
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 90/166 (54%), Gaps = 21/166 (12%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 86 VRLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRA 145
Query: 672 -HYLELVDGGTTS--------------SDDGADSES-----SHSKS-KAKRVRTTFTEEQ 710
H L L TS D GA + +H ++ K RVRT E+Q
Sbjct: 146 DHGLLLERAAATSPSSPGPLPARGLHLPDPGAGRQPAPRPHAHKQAEKTTRVRTVLNEKQ 205
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 206 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 251
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 193 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 251
>gi|6678690|ref|NP_032525.1| LIM/homeobox protein Lhx5 [Mus musculus]
gi|20514764|ref|NP_620605.1| LIM/homeobox protein Lhx5 [Rattus norvegicus]
gi|47606426|sp|P61376.1|LHX5_RAT RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-2
gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|531220|gb|AAA62162.1| amino acid feature: homeodomain, bp 895 .. 1074; amino acid
feature: LIM1, bp 373 .. 516; amino acid feature: LIM2,
bp 550 .. 705 [Rattus norvegicus]
gi|1388183|gb|AAC52842.1| LIM/homeodomain [Mus musculus]
gi|26329557|dbj|BAC28517.1| unnamed protein product [Mus musculus]
gi|26339568|dbj|BAC33455.1| unnamed protein product [Mus musculus]
gi|34784227|gb|AAH57585.1| LIM homeobox protein 5 [Mus musculus]
gi|74148661|dbj|BAE24281.1| unnamed protein product [Mus musculus]
gi|148687827|gb|EDL19774.1| LIM homeobox protein 5 [Mus musculus]
gi|149063463|gb|EDM13786.1| LIM homeobox protein 5 [Rattus norvegicus]
Length = 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|403281850|ref|XP_003932386.1| PREDICTED: LIM/homeobox protein Lhx5 [Saimiri boliviensis
boliviensis]
Length = 385
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|11641283|ref|NP_071758.1| LIM/homeobox protein Lhx5 [Homo sapiens]
gi|332840493|ref|XP_001153819.2| PREDICTED: LIM/homeobox protein Lhx5 [Pan troglodytes]
gi|397525022|ref|XP_003832477.1| PREDICTED: LIM/homeobox protein Lhx5 [Pan paniscus]
gi|426374256|ref|XP_004053995.1| PREDICTED: LIM/homeobox protein Lhx5 [Gorilla gorilla gorilla]
gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|11527289|gb|AAG36963.1|AF291181_1 LHX5 protein [Homo sapiens]
gi|80475867|gb|AAI09231.1| LIM homeobox 5 [Homo sapiens]
gi|119618466|gb|EAW98060.1| LIM homeobox 5 [Homo sapiens]
gi|261861188|dbj|BAI47116.1| LIM homeobox 5 [synthetic construct]
Length = 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|340386484|ref|XP_003391738.1| PREDICTED: hypothetical protein LOC100632391, partial [Amphimedon
queenslandica]
Length = 299
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 121/272 (44%), Gaps = 12/272 (4%)
Query: 327 KETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFDLSPVQFRDALALR 386
K + +E + +S +R+ E +S WL V+P S + L FRDAL LR
Sbjct: 16 KRSLIREAVSTVSASFSTQNKRLFEISSEKGASSWLTVLPISEHGYYLHKGSFRDALCLR 75
Query: 387 YNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMASYAWNGIVKEPI 446
Y LPT C C +V H+L+C GG H+ LRD + + EP+
Sbjct: 76 YGWQPPHLPTTCV-CHKSFTVEHSLSCPNGGYTIFRHNNLRDLTSQFLCEVCHDVSTEPL 134
Query: 447 MRDSSSTS---------PALIADFKINGVWEAGGT-AFFDNRIVNADAPSYSSQTWNTIA 496
++ S S D WE G +FFD R+ N AP+ + +
Sbjct: 135 LQPVSGESFPQRSINRDEGARLDIAATNFWERNGQRSFFDIRVFNPLAPTNLNVSLRQCY 194
Query: 497 KRHAQEKHLKYNTAAEDLR-ASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHV 555
H +EK Y+ D+ F+PLV +T G L KRIA ++SEK K Y V
Sbjct: 195 HSHEREKRRTYDQRVRDIEHGCFSPLVFNTLGGLGPTATVVYKRIAALISEKKKLPYNIV 254
Query: 556 LSWLRVRTEFSILKAVSLRLRGTRQIVKPYGF 587
+ W+R FS+L++ + LRG+RQ + F
Sbjct: 255 IRWVRCHVSFSLLRSTIMLLRGSRQRIPRIDF 286
>gi|334321803|ref|XP_001374523.2| PREDICTED: LIM/homeobox protein Lhx4-like [Monodelphis domestica]
Length = 391
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 143 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 189
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 190 QLSSETGLDMRVVQVWFQNRRAKEKR 215
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 147 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 206
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 207 QNRRAKEK------RLKKDAGRHRWGQF 228
>gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/homeobox protein Lhx5 [Otolemur garnettii]
Length = 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|351694748|gb|EHA97666.1| LIM/homeobox protein Lhx5 [Heterocephalus glaber]
Length = 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 EDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|311270693|ref|XP_003132949.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like [Sus
scrofa]
Length = 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/homeobox protein Lhx5-like [Macaca mulatta]
gi|296213013|ref|XP_002753087.1| PREDICTED: LIM/homeobox protein Lhx5 [Callithrix jacchus]
gi|297693055|ref|XP_002823842.1| PREDICTED: LIM/homeobox protein Lhx5 [Pongo abelii]
gi|402887767|ref|XP_003907254.1| PREDICTED: LIM/homeobox protein Lhx5 [Papio anubis]
Length = 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|363736513|ref|XP_001235592.2| PREDICTED: LIM/homeobox protein Lhx4 [Gallus gallus]
Length = 374
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 68 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCK 127
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 128 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 174
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 175 QLSSETGLDMRVVQVWFQNRRAKEKR 200
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 132 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 191
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 192 QNRRAKEK------RLKKDAGRHRWGQF 213
>gi|198473411|ref|XP_001356286.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
gi|198139444|gb|EAL33349.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+DHVYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 151 FKRYGTKCSACDMGIPPTQVVRRAQDHVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 210
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 211 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 264
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 265 QLSQDTGLDMRVVQVWFQNRRAKEKR 290
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 234 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 290
>gi|426248250|ref|XP_004017877.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-2
[Ovis aries]
Length = 366
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ + S H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPDPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|431914229|gb|ELK15487.1| LIM/homeobox protein Lhx5 [Pteropus alecto]
Length = 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|355746127|gb|EHH50752.1| hypothetical protein EGM_01626, partial [Macaca fascicularis]
Length = 364
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 56 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 115
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 116 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 162
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 163 QLSSETGLDMRVVQVWFQNRRAKEKR 188
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 120 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 179
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 180 QNRRAKEK------RLKKDAGRHRWGQF 201
>gi|301770851|ref|XP_002920842.1| PREDICTED: LIM/homeobox protein Lhx4-like [Ailuropoda melanoleuca]
Length = 390
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CF+C C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFSCVICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|345790894|ref|XP_543409.3| PREDICTED: LIM/homeobox protein Lhx5 [Canis lupus familiaris]
Length = 402
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|354497499|ref|XP_003510857.1| PREDICTED: LIM/homeobox protein Lhx5-like [Cricetulus griseus]
gi|344257745|gb|EGW13849.1| LIM/homeobox protein Lhx5 [Cricetulus griseus]
Length = 402
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|296475432|tpg|DAA17547.1| TPA: ISL LIM homeobox 2 [Bos taurus]
gi|440909295|gb|ELR59218.1| Insulin enhancer protein ISL-2 [Bos grunniens mutus]
Length = 359
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ + S H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPDPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|76573889|ref|NP_001029088.1| LIM/homeobox protein Lhx1 [Pan troglodytes]
gi|297700651|ref|XP_002827352.1| PREDICTED: LIM/homeobox protein Lhx1 [Pongo abelii]
gi|311267821|ref|XP_003131754.1| PREDICTED: LIM/homeobox protein Lhx1-like [Sus scrofa]
gi|348567695|ref|XP_003469634.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cavia porcellus]
gi|359320451|ref|XP_003639347.1| PREDICTED: LIM/homeobox protein Lhx1-like [Canis lupus familiaris]
gi|397494263|ref|XP_003818003.1| PREDICTED: LIM/homeobox protein Lhx1 [Pan paniscus]
gi|402899902|ref|XP_003912923.1| PREDICTED: LIM/homeobox protein Lhx1 [Papio anubis]
gi|403274736|ref|XP_003929119.1| PREDICTED: LIM/homeobox protein Lhx1 [Saimiri boliviensis
boliviensis]
gi|410980542|ref|XP_003996636.1| PREDICTED: LIM/homeobox protein Lhx1 [Felis catus]
gi|426348609|ref|XP_004041924.1| PREDICTED: LIM/homeobox protein Lhx1 [Gorilla gorilla gorilla]
gi|60389888|sp|Q5IS44.1|LHX1_PANTR RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|60389889|sp|Q5IS89.1|LHX1_SAIBB RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|56122252|gb|AAV74277.1| LIM homeobox protein 1 [Saimiri boliviensis]
gi|56122342|gb|AAV74322.1| LIM homeobox protein 1 [Pan troglodytes]
gi|355568607|gb|EHH24888.1| LIM/homeobox protein Lhx1 [Macaca mulatta]
gi|444720995|gb|ELW61755.1| LIM/homeobox protein Lhx1 [Tupaia chinensis]
Length = 406
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|30410785|ref|NP_005559.2| LIM/homeobox protein Lhx1 [Homo sapiens]
gi|60416412|sp|P48742.2|LHX1_HUMAN RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=hLim-1
gi|75517203|gb|AAI01675.1| LIM homeobox 1 [Homo sapiens]
gi|85565997|gb|AAI11937.1| LIM homeobox 1 [Homo sapiens]
gi|119577978|gb|EAW57574.1| LIM homeobox 1 [Homo sapiens]
gi|167773161|gb|ABZ92015.1| LIM homeobox 1 [synthetic construct]
gi|208966670|dbj|BAG73349.1| LIM homeobox 1 [synthetic construct]
Length = 406
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 142 SPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 201
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 202 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|296201935|ref|XP_002748333.1| PREDICTED: LIM/homeobox protein Lhx1 [Callithrix jacchus]
Length = 406
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 142 SPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 201
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 202 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|157428018|ref|NP_001098917.1| LIM/homeobox protein Lhx1 [Bos taurus]
gi|358417202|ref|XP_003583582.1| PREDICTED: LIM/homeobox protein Lhx1-like [Bos taurus]
gi|157279406|gb|AAI53213.1| LHX1 protein [Bos taurus]
gi|296477035|tpg|DAA19150.1| TPA: LIM homeobox protein 1 [Bos taurus]
gi|440905066|gb|ELR55504.1| LIM/homeobox protein Lhx1 [Bos grunniens mutus]
Length = 406
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|395531962|ref|XP_003768042.1| PREDICTED: LIM/homeobox protein Lhx1 [Sarcophilus harrisii]
Length = 406
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSAAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSAAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|326924792|ref|XP_003208609.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4-like
[Meleagris gallopavo]
Length = 384
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 79 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCK 138
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 139 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 143 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 202
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 203 QNRRAKEK------RLKKDAGRHRWGQF 224
>gi|431890885|gb|ELK01764.1| LIM/homeobox protein Lhx1 [Pteropus alecto]
Length = 406
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|6678688|ref|NP_032524.1| LIM/homeobox protein Lhx1 [Mus musculus]
gi|94400804|ref|NP_665887.3| LIM/homeobox protein Lhx1 [Rattus norvegicus]
gi|354477124|ref|XP_003500772.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cricetulus griseus]
gi|51702761|sp|P63007.1|LHX1_RAT RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=Rlim
gi|51702763|sp|P63006.1|LHX1_MOUSE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|51702764|sp|P63008.1|LHX1_MESAU RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein LMX-2; AltName:
Full=Homeobox protein Lim-1
gi|2144068|pir||I58187 homeotic protein lim-1 - rat
gi|425217|emb|CAA81797.1| lim1 [Mus musculus]
gi|559636|gb|AAC60696.1| transcription factor [Rattus sp.]
gi|587463|emb|CAA57164.1| lmx2 [Mesocricetus auratus]
gi|4104801|gb|AAD02169.1| homeobox protein Lim1 [Mus musculus]
gi|62201098|gb|AAH92374.1| Lhx1 protein [Mus musculus]
gi|148683791|gb|EDL15738.1| LIM homeobox protein 1 [Mus musculus]
gi|149053699|gb|EDM05516.1| LIM homeobox protein 1 [Rattus norvegicus]
Length = 406
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|109019176|ref|XP_001115086.1| PREDICTED: LIM/homeobox protein Lhx4-like isoform 2 [Macaca
mulatta]
Length = 390
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 88/145 (60%), Gaps = 14/145 (9%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCKS 671
R FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 83 RRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKE 142
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E+
Sbjct: 143 DYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 189
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
++ TGL RV QVWFQN RA++K+
Sbjct: 190 LSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 146 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 205
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 206 QNRRAKEK------RLKKDAGRHRWGQF 227
>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b; Short=Islet-2B;
AltName: Full=Insulin gene enhancer protein isl-3;
Short=Islet-3
gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
Length = 358
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 88/166 (53%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF++ ++ +LC++
Sbjct: 83 RLFGIKCAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRAD 142
Query: 673 Y---LELVDGGTTSSDDGADSESSHSKS-------------------KAKRVRTTFTEEQ 710
+ LE GG+ S + H + K RVRT E+Q
Sbjct: 143 HGLALERGPGGSPLSPGNIHTRGLHMAADPVSVRQTPHRNHVHKQSEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|55846812|gb|AAV67410.1| LIM homeobox protein 1 [Macaca fascicularis]
Length = 403
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 53 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 112
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 113 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 172
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 173 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 232
Query: 755 KK 756
++
Sbjct: 233 RR 234
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 139 SPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 198
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 199 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 234
>gi|301776020|ref|XP_002923422.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1-like
[Ailuropoda melanoleuca]
Length = 405
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|301611522|ref|XP_002935283.1| PREDICTED: LIM/homeobox protein Lhx3-like [Xenopus (Silurana)
tropicalis]
Length = 362
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 93/164 (56%), Gaps = 22/164 (13%)
Query: 601 LLKGRLSVLICFRS-------FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+L +S L+ F S FG KC+ C +GI + VR+A++ VYHL CFAC CKRQ
Sbjct: 29 ILPTYISPLMPFCSTNMDVWRFGTKCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQ 88
Query: 654 LSTGEEFALHED-RVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQ 712
L+TG+EF L ED R++CK Y ++ ++S AKR RTT T +QL+
Sbjct: 89 LATGDEFYLMEDSRLVCKGDY--------------ETAKQREAESTAKRPRTTITAKQLE 134
Query: 713 VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 135 TLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 178
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV QV
Sbjct: 108 DYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQV 167
Query: 107 WFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
WFQN RA++K ++K R ++G Y
Sbjct: 168 WFQNRRAKEK------RLKKDAGRQRWGQY 191
>gi|344285733|ref|XP_003414614.1| PREDICTED: LIM/homeobox protein Lhx1-like [Loxodonta africana]
Length = 406
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSLAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSLAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|432094974|gb|ELK26382.1| LIM/homeobox protein Lhx5 [Myotis davidii]
Length = 315
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 61 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 120
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 121 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 180
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 181 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 240
Query: 756 K 756
+
Sbjct: 241 R 241
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 170 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 229
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 230 VWFQNRRSKERR 241
>gi|440898273|gb|ELR49802.1| LIM/homeobox protein Lhx5, partial [Bos grunniens mutus]
Length = 376
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 87/146 (59%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 57 FKRFGTKCASCQKGIPPMQVVRKAQDFVYHLHCFACIMCSRQLATGDEFYLMEDGRLVCK 116
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y A ++ S++ KR RTT T +QL+ L++ ++ P E
Sbjct: 117 VDYE-------------AAKQNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHVRE 163
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 164 QLSSETGLDMRVVQVWFQNRRAKEKR 189
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 52 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 111
++ S++ KR RTT T +QL+ L++ ++ P E+++ TGL RV QVWFQN
Sbjct: 124 QNDDSEAGTKRPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNR 183
Query: 112 RARQKK 117
RA++K+
Sbjct: 184 RAKEKR 189
>gi|18308156|gb|AAL67847.1|AF461699_1 LIM homeobox protein [Gallus gallus]
Length = 214
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCK 139
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ ++S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D+ ++ ++S AKR RTT T +QL+ L+ + P E+++ TGL RV QV
Sbjct: 141 DYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQV 200
Query: 107 WFQNSRARQKK 117
WFQN RA++K+
Sbjct: 201 WFQNRRAKEKR 211
>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
Length = 363
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD+VYH+ CF C C RQL G+EF+L ++ +LC++
Sbjct: 83 RLFGIKCAKCNLGFSSSDLVMRARDNVYHIECFRCSVCSRQLLPGDEFSLRDEELLCRAD 142
Query: 673 Y---LELVDGGTTSSDDGADSESS------------------HSKS-KAKRVRTTFTEEQ 710
+ +E G+ S S S H +S K RVRT E+Q
Sbjct: 143 HSLLMERTSAGSPISPGHIHSNRSLHLAAEPVTVRAPHRNHVHKQSEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYNANPRPDALMREQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 31 NFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 90
+ L + P A +H +S K RVRT E+QL L+ + + PD
Sbjct: 166 SLHLAAEPVTVRAPHRNHVHKQSE----KTTRVRTVLNEKQLHTLRTCYNANPRPDALMR 221
Query: 91 ERIAQITGLSKRVTQVWFQNSRARQKK 117
E++ ++TGLS RV +VWFQN R + KK
Sbjct: 222 EQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|300795417|ref|NP_001178166.1| insulin gene enhancer protein ISL-2 [Bos taurus]
Length = 359
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ + S H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPDPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E + ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEHLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E + ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEHLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|395822580|ref|XP_003784594.1| PREDICTED: insulin gene enhancer protein ISL-2 [Otolemur garnettii]
Length = 359
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ + S H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGQLPGARGLHLPDPGSARQPSLRPHVHKQTEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|8248965|gb|AAC60669.2| lateral and intermediate mesoderm differentiation and neurogenesis
protein [Mus sp.]
Length = 407
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 93/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
+
Sbjct: 236 AR 237
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 142 SPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 201
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++ +
Sbjct: 202 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKEAR 237
>gi|301615074|ref|XP_002937009.1| PREDICTED: LIM/homeobox protein Lhx4-like [Xenopus (Silurana)
tropicalis]
Length = 385
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 88/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CF+C C RQL+TG+EF L ED R++CK
Sbjct: 91 FKCFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFSCIICSRQLATGDEFYLMEDGRLVCK 150
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE AKR RTT T +QL+ L+ ++ P E
Sbjct: 151 EDY------ETAKQND--DSEGG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 197
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 198 QLSSETGLDMRVVQVWFQNRRAKEKR 223
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S+ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 155 TAKQNDDSEGGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 214
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 215 QNRRAKEK------RLKKDAGRQRWGQF 236
>gi|291405647|ref|XP_002719296.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 406
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 142 SPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 201
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 202 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|148225925|ref|NP_001084128.1| LIM/homeobox protein Lhx1 [Xenopus laevis]
gi|267419|sp|P29674.1|LHX1_XENLA RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=Xlim1;
Short=x-Lhx1; Short=xLIM-1
gi|64830|emb|CAA45353.1| homeobox protein [Xenopus laevis]
gi|213623130|gb|AAI69338.1| Homeobox protein [Xenopus laevis]
gi|213623134|gb|AAI69340.1| Homeobox protein [Xenopus laevis]
Length = 403
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 95/181 (52%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLELVDGGTTSS--------------------DDGADSESSHSKSK------------ 698
YL + +S DD DSES++ K
Sbjct: 116 EDYLNNNNAAKENSFISVTGSDPSLSPESQDPLQDDAKDSESANVSDKEAGINENDDQNL 175
Query: 699 -AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 176 GAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 235
Query: 756 K 756
+
Sbjct: 236 R 236
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 177 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 236
>gi|281343471|gb|EFB19055.1| hypothetical protein PANDA_014809 [Ailuropoda melanoleuca]
Length = 354
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|149058475|gb|EDM09632.1| LIM homeobox 9, isoform CRA_a [Rattus norvegicus]
gi|149058478|gb|EDM09635.1| LIM homeobox 9, isoform CRA_a [Rattus norvegicus]
Length = 349
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 54/195 (27%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C++H+ L+
Sbjct: 84 RCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFETLL 143
Query: 678 DG------------------------GTTSSDDG---------------------ADSES 692
G GT + G ++E+
Sbjct: 144 QGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNSGCNENEA 203
Query: 693 SH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV
Sbjct: 204 DHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVL 263
Query: 744 QVWFQNSRARQKKHL 758
QVWFQN+RA+ +++L
Sbjct: 264 QVWFQNARAKFRRNL 278
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 197 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 256
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 257 GLTKRVLQVWFQNARAKFRRNL 278
>gi|338727662|ref|XP_001915147.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Equus caballus]
Length = 403
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|149041730|gb|EDL95571.1| insulin related protein 2 (islet 2) [Rattus norvegicus]
Length = 359
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ +SS H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPDAGSGRQSSLRTHVHKQAEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|345493999|ref|XP_001603795.2| PREDICTED: LIM/homeobox protein Lhx3-like [Nasonia vitripennis]
Length = 450
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 86/152 (56%), Gaps = 18/152 (11%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFAL--HEDRVLC 669
F+ +G KC+ C +G+A S VR+A+D YHL CF+C C RQL TG+EF L + +++C
Sbjct: 108 FKRYGTKCAGCGQGLAPSQVVRRAQDFTYHLTCFSCAMCSRQLDTGDEFYLMVEDAKLVC 167
Query: 670 KSHY-----LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 724
K Y EL DGG+ D KR RTT T +QL+ L+ + P
Sbjct: 168 KPDYEQAKAKELADGGSIDGD-----------QPNKRPRTTITAKQLETLKLAYNNSPKP 216
Query: 725 DGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++Q TGL RV QVWFQN RA++K+
Sbjct: 217 ARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 248
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 21 TEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQ 80
T ++ ++ + +L PD A + + D S KR RTT T +QL+ L+ +
Sbjct: 152 TGDEFYLMVEDAKLVCKPDYEQAKAKELADGGSIDGDQPNKRPRTTITAKQLETLKLAYN 211
Query: 81 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 212 NSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 248
>gi|348505840|ref|XP_003440468.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oreochromis
niloticus]
Length = 359
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G SSD V +ARD+VYH+ CF C C R L G+EF+L +D +LC++
Sbjct: 83 RLFGIKCAKCNMGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDDELLCRAD 142
Query: 673 Y---LELVDGGTTSSDDGADSESSH-------------------SKSKAKRVRTTFTEEQ 710
+ +E G+ S + H K RVRT E+Q
Sbjct: 143 HGLMMERASAGSPLSPGNIHNRPLHISDPVSVRHPPHHRNHVHKPSEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|348500124|ref|XP_003437623.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oreochromis
niloticus]
Length = 360
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 91/167 (54%), Gaps = 23/167 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD+VYH+ CF C C RQL G+EF+L E+ +LC++
Sbjct: 83 RLFGIKCAKCNLGFSSSDLVMRARDNVYHIECFRCSVCSRQLLPGDEFSLREEELLCRAD 142
Query: 673 Y---LELVDGGTTSSDD----------GADSES---------SHSKS-KAKRVRTTFTEE 709
+ LE G+ S AD + H +S K RVRT E+
Sbjct: 143 HSLLLERSSAGSPVSPGHIHSNRPLHLAADPVTVRQAPHRNHVHKQSEKTTRVRTVLNEK 202
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 QLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
>gi|402874959|ref|XP_003901290.1| PREDICTED: insulin gene enhancer protein ISL-2 [Papio anubis]
Length = 350
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 74 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 133
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ + + H ++ K RVRT E+Q
Sbjct: 134 HGLLLERAAAGSPRSPGPLPGSRGLHLPDAGSGRQPALRPHVHKQTEKTTRVRTVLNEKQ 193
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 194 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 239
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 181 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 239
>gi|301767830|ref|XP_002919335.1| PREDICTED: LIM/homeobox protein Lhx9-like [Ailuropoda melanoleuca]
Length = 447
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|395501088|ref|XP_003754930.1| PREDICTED: insulin gene enhancer protein ISL-2 [Sarcophilus
harrisii]
Length = 335
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 89/168 (52%), Gaps = 23/168 (13%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+KC G +SSD V +AR++VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 57 IRLFGIKCAKCKVGFSSSDLVMRARENVYHIECFRCSVCSRQLLPGDEFSLREHELLCRA 116
Query: 672 HYLELVDGGTTSSDDG----ADSESSHSKS-------------------KAKRVRTTFTE 708
+ L+D + S A S S H + K RVRT E
Sbjct: 117 DHSLLLDRASAESPRSPGHLASSRSLHLSAEPGSGRQPSLRPHVHKQTEKTTRVRTVLNE 176
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 177 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 224
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 166 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 224
>gi|281354363|gb|EFB29947.1| hypothetical protein PANDA_009642 [Ailuropoda melanoleuca]
Length = 365
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CF+C C RQL+TG+EF L ED R++CK
Sbjct: 57 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFSCVICNRQLATGDEFYLMEDGRLVCK 116
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 117 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 163
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 164 QLSSETGLDMRVVQVWFQNRRAKEKR 189
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 121 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 180
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 181 QNRRAKEK------RLKKDAGRHRWGQF 202
>gi|403304937|ref|XP_003943035.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 359
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ + + H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPDPGSGRQPALRPHVHKQTEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|291410745|ref|XP_002721643.1| PREDICTED: ISL LIM homeobox 2 [Oryctolagus cuniculus]
Length = 359
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 89/166 (53%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFGSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G + + H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPDPGPGRQPTLRPHVHKQAEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|449509307|ref|XP_002191188.2| PREDICTED: LIM/homeobox protein Lhx4-like, partial [Taeniopygia
guttata]
Length = 412
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 99 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCK 158
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 159 EDY------ETAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 205
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 206 QLSSETGLDMRVVQVWFQNRRAKEKR 231
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 85/147 (57%), Gaps = 15/147 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 278 FLRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCK 337
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 338 EDY------ETAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 384
Query: 731 RIAQITGLSKRVTQVW-FQNSRARQKK 756
+++ TGL RV QVW Q R ++K+
Sbjct: 385 QLSSETGLDMRVVQVWRLQKQREKKKR 411
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 163 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 222
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 223 QNRRAKEK------RLKKDAGRHRWGQF 244
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW- 107
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVW
Sbjct: 342 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWR 401
Query: 108 FQNSRARQKK 117
Q R ++K+
Sbjct: 402 LQKQREKKKR 411
>gi|62241033|ref|NP_001014434.1| LIM/homeobox protein Lhx9 isoform 2 [Homo sapiens]
gi|114571650|ref|XP_525011.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 6 [Pan troglodytes]
gi|297281170|ref|XP_001110674.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Macaca mulatta]
gi|395729258|ref|XP_002809704.2| PREDICTED: LIM/homeobox protein Lhx9 [Pongo abelii]
gi|397505118|ref|XP_003823120.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan paniscus]
gi|402857736|ref|XP_003893401.1| PREDICTED: LIM/homeobox protein Lhx9 [Papio anubis]
gi|426333155|ref|XP_004028150.1| PREDICTED: LIM/homeobox protein Lhx9 [Gorilla gorilla gorilla]
gi|9367761|emb|CAB97493.1| LIM-homeobox 9 [Homo sapiens]
gi|119611697|gb|EAW91291.1| LIM homeobox 9, isoform CRA_e [Homo sapiens]
Length = 388
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|344276912|ref|XP_003410249.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Loxodonta africana]
Length = 388
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDMVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|270007707|gb|EFA04155.1| hypothetical protein TcasGA2_TC014400 [Tribolium castaneum]
Length = 415
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 10/146 (6%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C GI + VR+A+D+VYHL CF+C C RQL+TG+EF L EDR ++CK
Sbjct: 120 FKRFGTKCAGCDLGIPPTQVVRRAQDNVYHLQCFSCVMCARQLNTGDEFYLMEDRKLVCK 179
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y + + + + D + + KR RTT T +QL+ L+ + P E
Sbjct: 180 PDY----EAAKSKAAECLDGDQPN-----KRPRTTITAKQLETLKNAYNNSPKPARHVRE 230
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 231 QLSQDTGLDMRVVQVWFQNRRAKEKR 256
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 200 KRPRTTITAKQLETLKNAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 256
>gi|117306370|gb|AAI26705.1| LHX9 protein [Bos taurus]
Length = 388
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|410986202|ref|XP_003999401.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Felis catus]
Length = 388
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYTPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|363740116|ref|XP_001234553.2| PREDICTED: LIM/homeobox protein Lhx5 [Gallus gallus]
Length = 402
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR+ V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + ++E+ S
Sbjct: 117 EDYLNSPSLKEGSLNSVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TTNNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|296230329|ref|XP_002760660.1| PREDICTED: LIM/homeobox protein Lhx9 [Callithrix jacchus]
Length = 388
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|291402696|ref|XP_002717724.1| PREDICTED: LIM homeobox protein 9-like isoform 2 [Oryctolagus
cuniculus]
Length = 388
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|403307414|ref|XP_003944190.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 388
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|403304939|ref|XP_003943036.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 91/167 (54%), Gaps = 23/167 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS--------------DDGADSESS-----HSKS-KAKRVRTTFTEE 709
+ LE G+ S D G+ + + H ++ K RVRT E+
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPADPGSGRQPALRPHVHKQTEKTTRVRTVLNEK 202
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
>gi|6980082|gb|AAF34717.1|AF226616_1 LIM-homeodomain transcription factor islet [Branchiostoma floridae]
Length = 419
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 25/179 (13%)
Query: 603 KGRLSVLICF-RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFA 661
+G+ C+ R FG KC+KC G +D+V +A++ +YH+ CF C AC RQL G+EFA
Sbjct: 60 EGKTYCKRCYVRLFGTKCAKCSLGFTKNDFVMRAKNKIYHIDCFRCVACSRQLIPGDEFA 119
Query: 662 LHEDRVLCKSHYLEL------VDGGTTSSDDGADSE-----SSHSKS------------- 697
L ED + CK+ + L VD +S D E SH +S
Sbjct: 120 LREDGLFCKADHEVLERASNNVDSNGRASLGSTDLEMATRPESHGRSDQRRPQVHKQDGH 179
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|348578262|ref|XP_003474902.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cavia
porcellus]
Length = 388
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGSLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|189237525|ref|XP_973330.2| PREDICTED: similar to lim homeobox protein [Tribolium castaneum]
Length = 448
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 10/146 (6%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ FG KC+ C GI + VR+A+D+VYHL CF+C C RQL+TG+EF L EDR ++CK
Sbjct: 153 FKRFGTKCAGCDLGIPPTQVVRRAQDNVYHLQCFSCVMCARQLNTGDEFYLMEDRKLVCK 212
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y + + + + D + + KR RTT T +QL+ L+ + P E
Sbjct: 213 PDY----EAAKSKAAECLDGDQPN-----KRPRTTITAKQLETLKNAYNNSPKPARHVRE 263
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 264 QLSQDTGLDMRVVQVWFQNRRAKEKR 289
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 233 KRPRTTITAKQLETLKNAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 289
>gi|149743835|ref|XP_001492921.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Equus caballus]
Length = 388
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|355564712|gb|EHH21212.1| hypothetical protein EGK_04224, partial [Macaca mulatta]
Length = 293
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|355786560|gb|EHH66743.1| hypothetical protein EGM_03791, partial [Macaca fascicularis]
Length = 306
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|31077136|ref|NP_852032.1| LIM/homeobox protein Lhx9 [Rattus norvegicus]
gi|81895227|sp|Q80W90.1|LHX9_RAT RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|30525882|gb|AAP32472.1| LIM-homeodomain type transcription factor Lhx9 [Rattus norvegicus]
Length = 388
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|119611694|gb|EAW91288.1| LIM homeobox 9, isoform CRA_b [Homo sapiens]
Length = 378
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 166 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
>gi|21956641|ref|NP_665804.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
gi|114658283|ref|XP_001147206.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Pan
troglodytes]
gi|297697192|ref|XP_002825752.1| PREDICTED: insulin gene enhancer protein ISL-2 [Pongo abelii]
gi|426379888|ref|XP_004056619.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Gorilla
gorilla gorilla]
gi|20978495|sp|Q96A47.1|ISL2_HUMAN RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|15080438|gb|AAH11967.1| ISL LIM homeobox 2 [Homo sapiens]
gi|15082435|gb|AAH12136.1| ISL LIM homeobox 2 [Homo sapiens]
gi|119619626|gb|EAW99220.1| ISL2 transcription factor, LIM/homeodomain, (islet-2) [Homo
sapiens]
gi|167773881|gb|ABZ92375.1| ISL LIM homeobox 2 [synthetic construct]
gi|193785483|dbj|BAG50849.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ + + H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPDAGSGRQPALRPHVHKQTEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|66792874|ref|NP_001019715.1| LIM/homeobox protein Lhx9 [Bos taurus]
gi|61555226|gb|AAX46681.1| LIM homeobox 9 [Bos taurus]
gi|296478851|tpg|DAA20966.1| TPA: LIM/homeobox protein Lhx9 [Bos taurus]
Length = 378
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 166 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
>gi|149551088|ref|XP_001517055.1| PREDICTED: LIM/homeobox protein Lhx5-like, partial [Ornithorhynchus
anatinus]
Length = 231
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 36/180 (20%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKS 671
R FG KC+ C +GI+ SD VRKAR+ V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 9 RRFGTKCAGCAQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKE 68
Query: 672 HYL---------------------------------ELVDGGTTSSDDGADSESSHSKSK 698
YL + D T+S + A++E+ S
Sbjct: 69 DYLNSPSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDHSTSSDKEAANNENEEQNSG 128
Query: 699 AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 129 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 188
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 48 HTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 107
+ ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV QVW
Sbjct: 119 NNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVW 178
Query: 108 FQNSRARQKK 117
FQN R+++++
Sbjct: 179 FQNRRSKERR 188
>gi|109081997|ref|XP_001105068.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Macaca
mulatta]
Length = 359
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ + + H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGSRGLHLPDAGSGRQPALRPHVHKQTEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|335296201|ref|XP_003357709.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sus scrofa]
Length = 388
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|110611159|ref|NP_001036042.1| LIM/homeobox protein Lhx9 isoform c [Mus musculus]
gi|224471884|sp|Q9WUH2.3|LHX9_MOUSE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|289541370|gb|ADD09808.1| LIM-homeodomain transcription factor islet protein [Branchiostoma
belcheri]
Length = 250
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 89/168 (52%), Gaps = 24/168 (14%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +D+V +AR+ +YH+ CF C AC RQL G+EFAL ED + CK+
Sbjct: 33 RLFGTKCAKCSLGFTKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFALREDGLFCKTD 92
Query: 673 YLEL------VDGGTTSSDDGADSE-----SSHSKS-------------KAKRVRTTFTE 708
+ L VD +S D E SH +S K RVRT E
Sbjct: 93 HEVLERASNNVDSNGRASLGSTDLEMATRPESHGRSDQRRPQVHKQDGHKPTRVRTVLNE 152
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 153 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 200
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 142 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 200
>gi|301605176|ref|XP_002932201.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 398
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + LSTG+ F + E+ V C+
Sbjct: 126 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYCR 185
Query: 671 SHYLELVDG--------------------------------------------------- 679
H+ LV G
Sbjct: 186 IHFELLVQGDFHQQLNYTELSAKGGGIATLPYFSNGTGTVQKGRPRKRKSPALGVDIINY 245
Query: 680 --GTTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G ++ D + ++ S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 246 SSGCNENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 305
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 306 GLTKRVLQVWFQNARAKFRRNL 327
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 55/80 (68%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL
Sbjct: 248 GCNENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGL 307
Query: 100 SKRVTQVWFQNSRARQKKHL 119
+KRV QVWFQN+RA+ +++L
Sbjct: 308 TKRVLQVWFQNARAKFRRNL 327
>gi|348578260|ref|XP_003474901.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cavia
porcellus]
Length = 397
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGSLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|291402694|ref|XP_002717723.1| PREDICTED: LIM homeobox protein 9-like isoform 1 [Oryctolagus
cuniculus]
Length = 397
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|2149584|gb|AAC53336.1| LIM-homeobox protein [Mus musculus]
Length = 190
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 53 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 112
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 113 EDY------ETAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 159
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 160 QLSSETGLDMRVVQVWFQNRRAKEKR 185
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 117 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 176
Query: 109 QNSRARQKK 117
QN RA++K+
Sbjct: 177 QNRRAKEKR 185
>gi|351708127|gb|EHB11046.1| LIM/homeobox protein Lhx9 [Heterocephalus glaber]
Length = 397
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|33569216|ref|NP_064589.2| LIM/homeobox protein Lhx9 isoform 1 [Homo sapiens]
gi|73960328|ref|XP_848787.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Canis lupus
familiaris]
gi|332230752|ref|XP_003264559.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Nomascus
leucogenys]
gi|224471883|sp|Q9NQ69.3|LHX9_HUMAN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|33416232|gb|AAP32471.2| LIM-homeobox 9 protein [Homo sapiens]
gi|119611696|gb|EAW91290.1| LIM homeobox 9, isoform CRA_d [Homo sapiens]
gi|124297089|gb|AAI31623.1| LIM homeobox 9 [Homo sapiens]
gi|355558916|gb|EHH15696.1| hypothetical protein EGK_01820 [Macaca mulatta]
gi|355746065|gb|EHH50690.1| hypothetical protein EGM_01558 [Macaca fascicularis]
Length = 397
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|341877265|gb|EGT33200.1| CBN-CEH-14 protein [Caenorhabditis brenneri]
Length = 358
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 84/147 (57%), Gaps = 7/147 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
F++FG KC+ C GI VRKA H+YH+ CF C CKR L TGEEF L D R++C
Sbjct: 101 FKNFGTKCAACSEGIIPDHVVRKASGHIYHVECFTCFICKRVLETGEEFYLIADDARLVC 160
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K Y + D S + ADSE KR RTT + + L+ L+ +Q S P
Sbjct: 161 KDDYEQARD--KLSLPETADSEGDGGN---KRPRTTISAKSLETLKQAYQTSSKPARHVR 215
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 216 EQLAADTGLDMRVVQVWFQNRRAKEKR 242
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT + + L+ L+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 186 KRPRTTISAKSLETLKQAYQTSSKPARHVREQLAADTGLDMRVVQVWFQNRRAKEKR 242
>gi|6180221|emb|CAB59908.1| putative LIM homeodomain protein [Mus musculus]
Length = 366
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 94 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 153
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 154 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 213
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 214 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 273
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 274 GLTKRVLQVWFQNARAKFRRNL 295
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 214 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 273
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 274 GLTKRVLQVWFQNARAKFRRNL 295
>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 20/165 (12%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+KC +G +D+V +AR+ +YH+ CF C AC RQL G+EFAL ED + CK+
Sbjct: 106 LRLFGTKCAKCSQGFTKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFALREDGLFCKA 165
Query: 672 HYLELVDGG---------------TTSSDDGADSESS-----HSKSKAKRVRTTFTEEQL 711
+ + G T ++ + SS H + K RVRT E+QL
Sbjct: 166 DHEVMERPGDRDQVPNVNHRNYINATRAEPMPNRTSSGRSHVHKQEKPTRVRTVLNEKQL 225
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 226 HTLRTCYAANPRPDALMKEQLVEMTQLSPRVIRVWFQNKRCKDKK 270
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 55 HSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 114
H + K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R +
Sbjct: 208 HKQEKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTQLSPRVIRVWFQNKRCK 267
Query: 115 QKK 117
KK
Sbjct: 268 DKK 270
>gi|354485102|ref|XP_003504723.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cricetulus
griseus]
Length = 397
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|224471838|sp|A0JNI8.2|LHX9_BOVIN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|110665672|gb|ABG81482.1| LIM homeobox 9 [Bos taurus]
Length = 397
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|395838925|ref|XP_003792355.1| PREDICTED: LIM/homeobox protein Lhx9 [Otolemur garnettii]
Length = 397
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|296236843|ref|XP_002763501.1| PREDICTED: insulin gene enhancer protein ISL-2 [Callithrix jacchus]
Length = 359
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 YLELVD----------------GGTTSSDDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ L++ G SD G+ + + H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAADSPRSPGPLPGARGLHLSDPGSGRQPTLRPHVHKQTEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|440904877|gb|ELR55334.1| LIM/homeobox protein Lhx9 [Bos grunniens mutus]
Length = 397
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|209737368|gb|ACI69553.1| Insulin gene enhancer protein isl-1 [Salmo salar]
Length = 356
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 24/167 (14%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 73 RLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 132
Query: 673 YLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTEE 709
+ ++V+ T S D AD S+ + K RVRT E+
Sbjct: 133 H-DVVERATMGSGDPLSPLHPARPLQMAADPISARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 192 QLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|281354175|gb|EFB29759.1| hypothetical protein PANDA_007956 [Ailuropoda melanoleuca]
Length = 382
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|332844416|ref|XP_003314842.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Pan
troglodytes]
gi|426379890|ref|XP_004056620.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 360
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 91/167 (54%), Gaps = 23/167 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS--------------DDGADSESS-----HSKS-KAKRVRTTFTEE 709
+ LE G+ S D G+ + + H ++ K RVRT E+
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPADAGSGRQPALRPHVHKQTEKTTRVRTVLNEK 202
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
>gi|46394864|gb|AAS91588.1| Lim1 [Oryctolagus cuniculus]
Length = 348
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 92/179 (51%), Gaps = 37/179 (20%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKSHY 673
FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK Y
Sbjct: 1 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 60
Query: 674 LE---------------------LVDGGTTSSDDGADSESSHSKSK-------------A 699
L D S DD DSES++ K A
Sbjct: 61 LSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGA 120
Query: 700 KR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 121 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 179
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 84 SPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 143
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 144 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 179
>gi|410976694|ref|XP_003994749.1| PREDICTED: LIM/homeobox protein Lhx5 [Felis catus]
Length = 332
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCGQGISPSDLVRKARGKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|260794979|ref|XP_002592484.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277704|gb|EEN48495.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 330
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 45/191 (23%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C +C GI + + V +ARD VYHLACF C C + L+TG+EF + + C+
Sbjct: 69 YRRFAVQRCGRCHLGITAREMVMRARDSVYHLACFTCVTCDKALTTGDEFGMQGSAIYCR 128
Query: 671 SHYLELVDG--------------------------------------------GTTSSDD 686
HY + G++ +++
Sbjct: 129 YHYETFMRSEGRYGAAMGSKPLPHSPYYHSPGGVSYRGRPRKRGDSDSYCSVPGSSDNEN 188
Query: 687 GADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 746
D +K KR+RT+F QL+ L++ F ++ NPD +DL+++AQ TGL+KRV QVW
Sbjct: 189 DLDLNGHGGATKTKRIRTSFKHHQLRTLKSYFAINHNPDSKDLQQLAQKTGLTKRVLQVW 248
Query: 747 FQNSRARQKKH 757
FQN+RA+ +++
Sbjct: 249 FQNARAKHRRN 259
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
+D+ + D +K KR+RT+F QL+ L++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 184 SDNENDLDLNGHGGATKTKRIRTSFKHHQLRTLKSYFAINHNPDSKDLQQLAQKTGLTKR 243
Query: 103 VTQVWFQNSRARQKKH 118
V QVWFQN+RA+ +++
Sbjct: 244 VLQVWFQNARAKHRRN 259
>gi|154146254|ref|NP_081673.2| insulin gene enhancer protein ISL-2 [Mus musculus]
gi|408360153|sp|Q9CXV0.2|ISL2_MOUSE RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|148693907|gb|EDL25854.1| insulin related protein 2 (islet 2) [Mus musculus]
gi|183396835|gb|AAI65972.1| Insulin related protein 2 (islet 2) [synthetic construct]
Length = 359
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S D G+ + S H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGARGLHLPDAGSGRQPSLRTHVHKQAEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|449478514|ref|XP_002188995.2| PREDICTED: LIM/homeobox protein LMX-1.2-like [Taeniopygia guttata]
Length = 352
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 91/179 (50%), Gaps = 35/179 (19%)
Query: 607 SVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR 666
S FR F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E +
Sbjct: 55 STYFTFRLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQ 114
Query: 667 VLCKSHY--------------------------LELVDGGTT---SSDDGADSESSHSKS 697
+LCKS Y ++ G T SDDG D
Sbjct: 115 LLCKSDYEKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPR------ 168
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 169 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 227
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV Q
Sbjct: 156 TQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 215
Query: 106 VWFQNSRARQKK 117
VWFQN RA+ KK
Sbjct: 216 VWFQNQRAKMKK 227
>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
Length = 236
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 89/146 (60%), Gaps = 14/146 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 57 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCK 116
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 117 EDY------ETAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 163
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 164 QLSSETGLDMRVVQVWFQNRRAKEKR 189
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 49 TDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
T ++ S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWF
Sbjct: 121 TAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF 180
Query: 109 QNSRARQKKHLHTGKMKSSQNRPKYGYY 136
QN RA++K ++K R ++G +
Sbjct: 181 QNRRAKEK------RLKKDAGRHRWGQF 202
>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
Length = 432
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 86/144 (59%), Gaps = 12/144 (8%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCKSHY 673
+G KC+ C +GI ++ VR+A+D+VYHL CFAC C RQL+TG+EF L EDR ++CK+ Y
Sbjct: 137 YGTKCAGCEKGIPPTEVVRRAQDNVYHLECFACLMCSRQLNTGDEFYLMEDRKLVCKADY 196
Query: 674 LELVDGGTTSSD-DGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
G D D A+ KR RTT T +QL+ L+ + P E++
Sbjct: 197 ESAKARGINEYDIDAAN----------KRPRTTITAKQLEALKRAYNESPKPARHVREQL 246
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
+ TGL RV QVWFQN RA++K+
Sbjct: 247 SAETGLDMRVVQVWFQNRRAKEKR 270
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 214 KRPRTTITAKQLEALKRAYNESPKPARHVREQLSAETGLDMRVVQVWFQNRRAKEKR 270
>gi|449268141|gb|EMC79011.1| LIM/homeobox protein Lhx9 [Columba livia]
Length = 378
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 165
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 166 AHFESLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
>gi|126306413|ref|XP_001367734.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Monodelphis
domestica]
gi|395531043|ref|XP_003767592.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sarcophilus
harrisii]
Length = 388
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 296 GLTKRVLQVWFQNARAKFRRNL 317
>gi|195050066|ref|XP_001992820.1| GH13485 [Drosophila grimshawi]
gi|193899879|gb|EDV98745.1| GH13485 [Drosophila grimshawi]
Length = 451
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 94 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 153
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 154 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|242011200|ref|XP_002426343.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
gi|212510420|gb|EEB13605.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
Length = 366
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 87/146 (59%), Gaps = 10/146 (6%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+++VYHL CFAC C RQL+TG+EF L ED +++CK
Sbjct: 76 FKRFGTKCAGCEQGIPPTQVVRRAQENVYHLQCFACAMCARQLNTGDEFYLMEDKKLVCK 135
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y + DG + KR RTT T +QL+ L++ + P E
Sbjct: 136 PDYE------AAKTKDGVCLDGDQPN---KRPRTTITAKQLETLKSAYNNSPKPARHVRE 186
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 187 QLSQDTGLDMRVVQVWFQNRRAKEKR 212
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
KR RTT T +QL+ L++ + P E+++Q TGL RV QVWFQN RA++K
Sbjct: 156 KRPRTTITAKQLETLKSAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEK---- 211
Query: 121 TGKMKSSQNRPKYGYY 136
++K R K+ Y
Sbjct: 212 --RLKKDAGRTKWSQY 225
>gi|29570244|gb|AAO85392.1| LIM-homeobox protein 9 [Sus scrofa]
Length = 369
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|195398039|ref|XP_002057632.1| GJ17996 [Drosophila virilis]
gi|194141286|gb|EDW57705.1| GJ17996 [Drosophila virilis]
Length = 545
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 178 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 237
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 238 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 291
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 292 QLSQDTGLDMRVVQVWFQNRRAKEKR 317
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 261 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 317
>gi|326924940|ref|XP_003208680.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Meleagris
gallopavo]
Length = 338
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 66 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 125
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 126 AHFESLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 185
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 186 GCNENEADHMDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 245
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 246 GLTKRVLQVWFQNARAKFRRNL 267
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 186 GCNENEADHMDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 245
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 246 GLTKRVLQVWFQNARAKFRRNL 267
>gi|432113616|gb|ELK35898.1| LIM/homeobox protein Lhx1 [Myotis davidii]
Length = 272
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 142 SPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 201
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKYGYYPEPNK 141
P E++AQ TGL+ RV QVWFQN R+++++ K S+ ++ ++ P+
Sbjct: 202 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----KQLSALGARRHAFFRSPSP 257
Query: 142 S 142
S
Sbjct: 258 S 258
>gi|27923333|gb|AAO27570.1| LIM-homeodomain type transcription factor Lhx9 [Rattus norvegicus]
Length = 325
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 94 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 153
Query: 671 SHYLELVDG------------------------GTTSSDDGA------------------ 688
+H+ L+ G GT + G
Sbjct: 154 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 213
Query: 689 ---DSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 214 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 273
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 274 GLTKRVLQVWFQNARAKFRRNL 295
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 214 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 273
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 274 GLTKRVLQVWFQNARAKFRRNL 295
>gi|124246799|gb|ABE65382.2| putative LIM homeodomain protein [Trachemys scripta]
Length = 235
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 54/195 (27%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C++H+ L+
Sbjct: 4 RCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCRAHFETLL 63
Query: 678 DG------------------------GTTSSDDG---------------------ADSES 692
G GT + G ++E+
Sbjct: 64 QGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVSYNSGCNENEA 123
Query: 693 SH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV
Sbjct: 124 DHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVL 183
Query: 744 QVWFQNSRARQKKHL 758
QVWFQN+RA+ +++L
Sbjct: 184 QVWFQNARAKFRRNL 198
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 117 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 176
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 177 GLTKRVLQVWFQNARAKFRRNL 198
>gi|327282632|ref|XP_003226046.1| PREDICTED: LIM/homeobox protein Lhx5-like [Anolis carolinensis]
Length = 400
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 93/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARGKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + ++E+ S
Sbjct: 117 EDYLSSASLKEGSLNSVSSCTDRSLSPDLQDPMQDDPKETDNSTSSDKETTNNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TTNNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|154147696|ref|NP_001093698.1| LIM homeobox 1 [Xenopus (Silurana) tropicalis]
gi|138519843|gb|AAI35732.1| lhx1 protein [Xenopus (Silurana) tropicalis]
Length = 409
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 95/185 (51%), Gaps = 40/185 (21%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLEL---------------VDGGTTS---------SDDGADSESSHSKSK-------- 698
YL V G S DD DSES++ K
Sbjct: 116 EDYLNNNNNNNNAAKENSFISVTGSDPSLSPESQDPLQDDAKDSESANISDKEAGVNEND 175
Query: 699 -----AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 751
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R
Sbjct: 176 DQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRR 235
Query: 752 ARQKK 756
+++++
Sbjct: 236 SKERR 240
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 181 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 240
>gi|24585132|ref|NP_724161.1| Lim3, isoform B [Drosophila melanogaster]
gi|386769865|ref|NP_001246085.1| Lim3, isoform C [Drosophila melanogaster]
gi|386769867|ref|NP_001246086.1| Lim3, isoform D [Drosophila melanogaster]
gi|386769871|ref|NP_001246088.1| Lim3, isoform F [Drosophila melanogaster]
gi|22946804|gb|AAF53758.2| Lim3, isoform B [Drosophila melanogaster]
gi|124248338|gb|ABM92789.1| FI01025p [Drosophila melanogaster]
gi|383291570|gb|AFH03759.1| Lim3, isoform C [Drosophila melanogaster]
gi|383291571|gb|AFH03760.1| Lim3, isoform D [Drosophila melanogaster]
gi|383291573|gb|AFH03762.1| Lim3, isoform F [Drosophila melanogaster]
Length = 520
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 174 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 233
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 234 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 287
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 288 QLSQDTGLDMRVVQVWFQNRRAKEKR 313
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 257 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 313
>gi|195345019|ref|XP_002039073.1| GM17030 [Drosophila sechellia]
gi|194134203|gb|EDW55719.1| GM17030 [Drosophila sechellia]
Length = 523
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 179 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 238
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 239 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 292
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 293 QLSQDTGLDMRVVQVWFQNRRAKEKR 318
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 262 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 318
>gi|190361014|gb|ACE76893.1| Lim1, partial [Emys orbicularis]
Length = 261
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ S+ VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 22 FRCFGTKCAGCAQGISPSNLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 81
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 82 EDYLNNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGNNENDDQN 141
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 142 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 201
Query: 755 KK 756
++
Sbjct: 202 RR 203
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 38 PDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQLD 82
PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 109 PDSQDPSQDDAKDSESANVSDKEAGNNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAAT 168
Query: 83 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 169 PKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 203
>gi|195438224|ref|XP_002067037.1| GK24239 [Drosophila willistoni]
gi|194163122|gb|EDW78023.1| GK24239 [Drosophila willistoni]
Length = 448
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 94 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 153
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 154 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|432854590|ref|XP_004067976.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Oryzias latipes]
Length = 378
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 56/203 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SHYLELVDG-------------------------GTTSSDDGA----------------- 688
H+ LV G GT ++ G
Sbjct: 166 LHFETLVQGPDYHPQLNFAELAAKGGGLALPYFNGTGTTQKGRPRKRKSPAMGIDIPSYN 225
Query: 689 -------------DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 226 TGCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQK 285
Query: 736 TGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ ++++
Sbjct: 286 TGLTKRVLQVWFQNARAKFRRNV 308
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTD--SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + TDH D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 227 GCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 286
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ ++++
Sbjct: 287 GLTKRVLQVWFQNARAKFRRNV 308
>gi|442628307|ref|NP_001260559.1| Lim3, isoform G [Drosophila melanogaster]
gi|440213916|gb|AGB93094.1| Lim3, isoform G [Drosophila melanogaster]
Length = 555
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 174 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 233
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 234 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 287
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 288 QLSQDTGLDMRVVQVWFQNRRAKEKR 313
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 257 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 313
>gi|348536381|ref|XP_003455675.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Oreochromis
niloticus]
Length = 399
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 56/203 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 127 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCR 186
Query: 671 SHYLELVDG-------------------------GTTSSDDGA----------------- 688
H+ LV G GT ++ G
Sbjct: 187 LHFETLVQGPDYHPQLNFAELAAKGGGLTLPYFNGTGTAQKGRPRKRKSPAMGIDIPSYN 246
Query: 689 -------------DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 247 TGCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQK 306
Query: 736 TGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ ++++
Sbjct: 307 TGLTKRVLQVWFQNARAKFRRNV 329
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTD--SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + TDH D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 248 GCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 307
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ ++++
Sbjct: 308 GLTKRVLQVWFQNARAKFRRNV 329
>gi|225581041|gb|ACN94618.1| GA10505 [Drosophila miranda]
Length = 499
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 150 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 209
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 210 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 263
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 264 QLSQDTGLDMRVVQVWFQNRRAKEKR 289
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 233 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 289
>gi|4530371|gb|AAD22008.1| LIM homeobox protein 9 [Mus musculus]
Length = 378
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCFTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 166 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
>gi|397639097|gb|EJK73382.1| hypothetical protein THAOC_04995 [Thalassiosira oceanica]
Length = 1332
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 7/197 (3%)
Query: 131 PKYGYYPEPNKSFLVI--KPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGDEKKNYVKE 188
PKYGYYP+P KSF V + + + L L +Q V R+LGG +G+ + K+ YV
Sbjct: 506 PKYGYYPKPEKSFHVCMEADEAVAKQEFLSRGLELQFVRGHRYLGGHVGSKESKEQYVNS 565
Query: 189 KVNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTL 248
KV W ++ L+E AK PQ+A + T LQ +W ++ RV+ PL +I
Sbjct: 566 KVEGWCTSLRALAEIAKTHPQSAHAAFTFCLQHKWMYMCRVIPGIAQLLEPLERVIREVW 625
Query: 249 VPSIF-----EHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLK 303
+P++ E ++ EL R GGLGI +P++TA+ A + LV+S+++
Sbjct: 626 IPALLGSPPEELHRANVSRELLANAVRNGGLGIRNPIDTAERQHATSVSVTLTLVESIVR 685
Query: 304 QEQLNLQEHNQCVKNAI 320
E+L++ H + +K +
Sbjct: 686 GEKLDMLAHERQMKETL 702
>gi|195484367|ref|XP_002090664.1| GE12672 [Drosophila yakuba]
gi|194176765|gb|EDW90376.1| GE12672 [Drosophila yakuba]
Length = 442
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 94 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 153
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 154 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|4106560|gb|AAD02889.1| LIM homeodomain transcription factor [Drosophila melanogaster]
Length = 440
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 94 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 153
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 154 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|17136270|ref|NP_476606.1| Lim3, isoform A [Drosophila melanogaster]
gi|7298537|gb|AAF53756.1| Lim3, isoform A [Drosophila melanogaster]
Length = 440
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 94 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 153
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 154 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|195580083|ref|XP_002079885.1| GD21780 [Drosophila simulans]
gi|194191894|gb|EDX05470.1| GD21780 [Drosophila simulans]
Length = 438
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 94 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 153
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 154 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|194879752|ref|XP_001974294.1| GG21652 [Drosophila erecta]
gi|190657481|gb|EDV54694.1| GG21652 [Drosophila erecta]
Length = 442
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 94 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 153
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 154 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|432092293|gb|ELK24915.1| LIM/homeobox protein Lhx9, partial [Myotis davidii]
Length = 420
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 66 YRRFSVQRCARCHLGISASEMVMRARDAVYHLSCFTCSTCSKTLATGDHFGMKDGLVYCR 125
Query: 671 SHYLELVDG------------------------GTTSSDDGA------------------ 688
+H+ L+ G GT + G
Sbjct: 126 AHFESLLHGEFPAPLSYTELAAKGGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYSS 185
Query: 689 ------------DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 186 GCNENEADPLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 245
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 246 GLTKRVLQVWFQNARAKFRRNL 267
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 192 ADPLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 250
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 251 VLQVWFQNARAKFRRNL 267
>gi|62020648|gb|AAH20470.1| LHX1 protein, partial [Homo sapiens]
Length = 260
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 142 SPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 201
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 202 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|194759358|ref|XP_001961916.1| GF15212 [Drosophila ananassae]
gi|190615613|gb|EDV31137.1| GF15212 [Drosophila ananassae]
Length = 444
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 94 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 153
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 154 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|126272190|ref|XP_001362509.1| PREDICTED: insulin gene enhancer protein ISL-2 [Monodelphis
domestica]
Length = 359
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 22/167 (13%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+KC G +SSD V +AR++VYH+ CF C C RQL G+EF+L + +LC++
Sbjct: 82 IRLFGIKCAKCKVGFSSSDLVMRARENVYHIECFRCSVCSRQLLPGDEFSLRDHELLCRA 141
Query: 672 HYLELVD----------------GGTTSSDDGADSESS-----HSKS-KAKRVRTTFTEE 709
+ L+D G S+ G+ + S H ++ K RVRT E+
Sbjct: 142 DHSLLLDRASGESPRSPGHLPSSRGLHLSEPGSGRQPSLRAHVHKQAEKTTRVRTVLNEK 201
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 202 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|195115252|ref|XP_002002178.1| GI17237 [Drosophila mojavensis]
gi|193912753|gb|EDW11620.1| GI17237 [Drosophila mojavensis]
Length = 449
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 94 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 153
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 154 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 207
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 208 QLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|2641222|gb|AAB86860.1| homeobox protein LIM-3 [Danio rerio]
Length = 374
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 15/146 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL C AC CKRQL+TG+E+ L ED R++CK
Sbjct: 56 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCNACIVCKRQLATGDEYYLMEDSRLVCK 115
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ AD S AKR RTT T +QL+ L+ + P E
Sbjct: 116 ADY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 161
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 162 QLSTETGLDMRVVQVWFQNRRAKEKR 187
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
D+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 116 ADYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQ 175
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
VWFQN RA++K ++K R ++G Y
Sbjct: 176 VWFQNRRAKEK------RLKKDAGRQRWGQY 200
>gi|344236825|gb|EGV92928.1| LIM homeobox transcription factor 1-alpha [Cricetulus griseus]
Length = 333
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 87/165 (52%), Gaps = 21/165 (12%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK
Sbjct: 39 RLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGD 98
Query: 673 Y------LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQL 711
Y L LV + S D E S+H K KR RT T +Q
Sbjct: 99 YEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQR 158
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 159 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 203
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 137 SEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 196
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 197 QRAKMKK 203
>gi|410921836|ref|XP_003974389.1| PREDICTED: LIM/homeobox protein Lhx9-like [Takifugu rubripes]
Length = 506
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 56/203 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 234 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCR 293
Query: 671 SHYLELVDG-------------------------GTTSSDDGA----------------- 688
H+ LV G GT ++ G
Sbjct: 294 LHFETLVQGPDYHAQLNFAELAAKGGGLSLPYFNGTGTAQKGRPRKRKSPAMGIDISSYN 353
Query: 689 -------------DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 354 TGCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQK 413
Query: 736 TGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ ++++
Sbjct: 414 TGLTKRVLQVWFQNARAKFRRNI 436
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTD--SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + TDH D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 355 GCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 414
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ ++++
Sbjct: 415 GLTKRVLQVWFQNARAKFRRNI 436
>gi|18858907|ref|NP_571045.1| insulin gene enhancer protein isl-2a [Danio rerio]
gi|1708561|sp|P53406.1|ISL2A_DANRE RecName: Full=Insulin gene enhancer protein isl-2a; Short=Islet-2A;
AltName: Full=Insulin gene enhancer protein isl-2;
Short=Islet-2
gi|871001|emb|CAA61283.1| Islet-2 protein [Danio rerio]
gi|1037166|dbj|BAA07484.1| zfIsl-2 [Danio rerio]
gi|190336908|gb|AAI62631.1| Islet2a [Danio rerio]
gi|190339440|gb|AAI62833.1| Islet2a [Danio rerio]
Length = 359
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G SSD V +ARD+VYH+ CF C C R L G+EF+L ++ +LC++
Sbjct: 83 RLFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRAD 142
Query: 673 Y---LELVDGGTTSSDDGADSESS------------------HSKS-KAKRVRTTFTEEQ 710
+ +E G+ S S H +S K RVRT E+Q
Sbjct: 143 HGLLMERASAGSPISPGNIHSSRPLHIPEPVPVRQPPHRNHVHKQSEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|393912072|gb|EFO23845.2| hypothetical protein LOAG_04639 [Loa loa]
Length = 319
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 14/147 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFAL--HEDRVLC 669
++ FG KCS C GI VR+A +HVYH++CF C CKR+L TGEEF L + R++C
Sbjct: 63 YKRFGTKCSMCDEGICPDMVVRRANEHVYHVSCFQCIICKRELRTGEEFYLIPTDGRLVC 122
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
KS Y + A ++ + S KR RTT + + L++L+ +Q S P
Sbjct: 123 KSDY------------EMAKTKETDIDSNTKRPRTTISAKSLEILKQAYQASSKPARHIR 170
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 171 EQLAADTGLDMRVVQVWFQNRRAKEKR 197
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
S KR RTT + + L++L+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 138 SNTKRPRTTISAKSLEILKQAYQASSKPARHIREQLAADTGLDMRVVQVWFQNRRAKEKR 197
>gi|334327218|ref|XP_001378455.2| PREDICTED: LIM/homeobox protein Lhx5-like [Monodelphis domestica]
Length = 303
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 93/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + ++E+ S
Sbjct: 117 EDYLNSPSVKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETTNNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TTNNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|82621617|gb|ABB86480.1| LHX6/8-LIM class homeobox protein, partial [Nematostella vectensis]
gi|110339153|gb|ABG67840.1| LHX67, partial [Nematostella vectensis]
Length = 60
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 58/59 (98%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
AKRVRTTFTE+QLQ+LQANF +DSNPDGQDLERIAQ+TGLSKRVTQVWFQNSRARQKK+
Sbjct: 1 AKRVRTTFTEDQLQILQANFNIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKKY 59
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 58/59 (98%)
Query: 699 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
AKRVRTTFTE+QLQ+LQANF +DSNPDGQDLERIAQ+TGLSKRVTQVWFQNSRARQKK+
Sbjct: 1 AKRVRTTFTEDQLQILQANFNIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKKY 59
>gi|391327822|ref|XP_003738394.1| PREDICTED: LIM/homeobox protein Lhx3-like [Metaseiulus
occidentalis]
Length = 408
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 91/147 (61%), Gaps = 19/147 (12%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ +G KC+ C +GI + VR+A+++VYHLACF+C CKRQL+TG+EF L ED +++CK
Sbjct: 106 FKRYGTKCAGCEQGIPPTQVVRRAQENVYHLACFSCILCKRQLNTGDEFYLMEDNKLVCK 165
Query: 671 SHYLELVDGGTTSSDDGADSESSHSK-SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
AD E++ ++ KR RTT T +QL+ L++ + P
Sbjct: 166 -----------------ADYEAAKAREGSTKRPRTTITAKQLETLKSAYNQSPKPARHVR 208
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK 756
E++++ TGL RV QVWFQN RA++K+
Sbjct: 209 EQLSRDTGLDMRVVQVWFQNRRAKEKR 235
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L++ + P E++++ TGL RV QVWFQN RA++K+
Sbjct: 179 KRPRTTITAKQLETLKSAYNQSPKPARHVREQLSRDTGLDMRVVQVWFQNRRAKEKR 235
>gi|308512223|ref|XP_003118294.1| CRE-CEH-14 protein [Caenorhabditis remanei]
gi|308238940|gb|EFO82892.1| CRE-CEH-14 protein [Caenorhabditis remanei]
Length = 409
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 13/148 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
++ FG KC+ C GI VRKA H+YH+ CF C CKR L TGEEF L D R++C
Sbjct: 157 YKKFGTKCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVC 216
Query: 670 KSHYLELVDGGTTSSD-DGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
K Y + D T S+ DG++ KR RTT + + L L+ +Q S P
Sbjct: 217 KDDYEQARDKHTAESEGDGSN----------KRPRTTISAKSLDTLKQAYQASSKPARHV 266
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 267 REQLAAETGLDMRVVQVWFQNRRAKEKR 294
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 17 RTTFTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQ 76
RT T E+ ++ + +L D A +SE S KR RTT + + L L+
Sbjct: 197 RTLETGEEFYLIADDARLVCKDDYEQARDKHTAESEGDGSN---KRPRTTISAKSLDTLK 253
Query: 77 ANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 254 QAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRAKEKR 294
>gi|440910599|gb|ELR60379.1| LIM homeobox transcription factor 1-alpha, partial [Bos grunniens
mutus]
Length = 303
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 87/165 (52%), Gaps = 21/165 (12%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK
Sbjct: 9 RLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGD 68
Query: 673 Y------LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQL 711
Y L LV + S D E S+H K KR RT T +Q
Sbjct: 69 YEKERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDSKDHKRPKRPRTILTTQQR 128
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 129 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 173
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE S + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 107 SEDSKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 166
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 167 QRAKMKK 173
>gi|147902022|ref|NP_001084038.1| LIM/homeobox protein Lhx5 [Xenopus laevis]
gi|1708831|sp|P37137.2|LHX5_XENLA RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-5; Short=xLIM-5;
AltName: Full=xLIM-2A
gi|840658|gb|AAA99464.1| LIM class homeodomain protein [Xenopus laevis]
gi|54311470|gb|AAH84744.1| Lim5/Lhx5 protein [Xenopus laevis]
Length = 402
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 93/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C GI+ SD VRKAR+ V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCK 116
Query: 671 SHYLEL---------------------------------VDGGTTSSDDGADSESSHSKS 697
Y+ D T+S + A++E+ S
Sbjct: 117 EDYISASSLKESSLNSVSSCTDRSLSPDIQDPIQDESKETDHSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|312075006|ref|XP_003140224.1| hypothetical protein LOAG_04639 [Loa loa]
Length = 325
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 14/147 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFAL--HEDRVLC 669
++ FG KCS C GI VR+A +HVYH++CF C CKR+L TGEEF L + R++C
Sbjct: 69 YKRFGTKCSMCDEGICPDMVVRRANEHVYHVSCFQCIICKRELRTGEEFYLIPTDGRLVC 128
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
KS Y + A ++ + S KR RTT + + L++L+ +Q S P
Sbjct: 129 KSDY------------EMAKTKETDIDSNTKRPRTTISAKSLEILKQAYQASSKPARHIR 176
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 177 EQLAADTGLDMRVVQVWFQNRRAKEKR 203
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
S KR RTT + + L++L+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 144 SNTKRPRTTISAKSLEILKQAYQASSKPARHIREQLAADTGLDMRVVQVWFQNRRAKEKR 203
>gi|9994171|ref|NP_065204.1| insulin gene enhancer protein ISL-2 [Rattus norvegicus]
gi|1708563|sp|P50480.1|ISL2_RAT RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531218|gb|AAA62161.1| amino acid feature: homeodomain, bp 647 .. 826; amino acid feature:
LIM1, bp 155 .. 307; amino acid feature: LIM2, bp 341 ..
493 [Rattus norvegicus]
Length = 360
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 91/167 (54%), Gaps = 23/167 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSS--------------DDGADSESS-----HSKS-KAKRVRTTFTEE 709
+ LE G+ S D G+ + S H ++ K RVRT E+
Sbjct: 143 HGLLLERAAAGSPRSPGPLPGTPPGLHLPDAGSGQQVSLRTHVHKQAEKTTRVRTVLNEK 202
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
>gi|386769869|ref|NP_001246087.1| Lim3, isoform E [Drosophila melanogaster]
gi|383291572|gb|AFH03761.1| Lim3, isoform E [Drosophila melanogaster]
Length = 405
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
F+ +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 59 FKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICK 118
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y E G D D + + KR RTT T +QL+ L+ + P E
Sbjct: 119 RDYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVRE 172
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++Q TGL RV QVWFQN RA++K+
Sbjct: 173 QLSQDTGLDMRVVQVWFQNRRAKEKR 198
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 142 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 198
>gi|12851555|dbj|BAB29088.1| unnamed protein product [Mus musculus]
Length = 359
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 YLELVDGGTTSS----------------DDGADSESS------HSKSKAKRVRTTFTEEQ 710
+ L++ S D G+ + S K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRTPGPLPGARGLHLPDAGSGRQPSLRTHVDKQAEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 48 HTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 107
H D ++ K RVRT E+QL L+ + + PD E++ ++TGLS RV +VW
Sbjct: 183 HVDKQAE----KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVW 238
Query: 108 FQNSRARQKK 117
FQN R + KK
Sbjct: 239 FQNKRCKDKK 248
>gi|47217395|emb|CAG00755.1| unnamed protein product [Tetraodon nigroviridis]
Length = 343
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 56/203 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 66 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCR 125
Query: 671 SHYLELVDG-------------------------GTTSSDDGA----------------- 688
H+ LV G GT ++ G
Sbjct: 126 LHFESLVQGPDYHAQLNFAELAAKGGGLPLPYFNGTGTAQKGRPRKRKSPAMGIDISGYS 185
Query: 689 -------------DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 186 TGCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQK 245
Query: 736 TGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++
Sbjct: 246 TGLTKRVLQVWFQNARAKFRRNF 268
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTD--SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + TDH D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 187 GCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 246
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++
Sbjct: 247 GLTKRVLQVWFQNARAKFRRNF 268
>gi|1708557|sp|P53408.1|ISL2A_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2A; Short=Islet-2A
Length = 358
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 21/165 (12%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+ C G SSD V +ARD+VYH+ CF C C R L G+EF+L ++ +LC++
Sbjct: 83 RLFGIKCANCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRAD 142
Query: 673 Y---LELVDGGTTSSDDGADSESSH------------------SKSKAKRVRTTFTEEQL 711
+ +E G+ S S S H K RVRT E+QL
Sbjct: 143 HGLLMEQASAGSPLSPGIIHSRSLHIADPVSVRQPPHRNHVHKQSEKTTRVRTVLNEKQL 202
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 HTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 247
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 189 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 247
>gi|328708425|ref|XP_001944208.2| PREDICTED: LIM/homeobox protein Lhx3-like [Acyrthosiphon pisum]
Length = 375
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 88/160 (55%), Gaps = 18/160 (11%)
Query: 604 GRLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE 659
R +L C F+ +G KC+ C GI + VR+A+D VYHL CFAC C R L+TG+E
Sbjct: 85 ARNGMLFCKDDFFKRYGTKCAGCDLGIPPTQIVRRAQDLVYHLQCFACVMCGRTLNTGDE 144
Query: 660 FALHEDR-VLCKSHY--LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQA 716
F L EDR ++CK Y + +GG D KR RTT T +QL+ L+
Sbjct: 145 FYLMEDRKLVCKPDYEAAKTKEGGCLDGD-----------QPNKRPRTTITAKQLETLKM 193
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 194 AYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 177 KRPRTTITAKQLETLKMAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 233
>gi|431921900|gb|ELK19103.1| LIM/homeobox protein Lhx9 [Pteropus alecto]
Length = 479
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 207 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 266
Query: 671 SHY-------------------------LELVDGGTT----------SSDDGAD------ 689
+H+ L +G T S G D
Sbjct: 267 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGAGTVQKGRPRKRKSPALGVDIVNYSS 326
Query: 690 ----SESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
+E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 327 GCNENEAEHLDRDQPPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 386
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 387 GLTKRVLQVWFQNARAKFRRNL 408
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 348 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 407
Query: 119 L 119
L
Sbjct: 408 L 408
>gi|432885359|ref|XP_004074682.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oryzias latipes]
Length = 396
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 97/181 (53%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ +D VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL-----------------------ELVD---------GGTTSSD---DGADSESSHS 695
YL +L D +TSSD + ++E +S
Sbjct: 117 EDYLSPGSIKEVSLNSVSSCTDRSLSPDLPDPTQDDIKETDNSTSSDKETNNIENEEQNS 176
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GAKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T++ ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TNNIENEEQNSGAKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|28316900|gb|AAO39472.1| RE70568p [Drosophila melanogaster]
Length = 523
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 84/145 (57%), Gaps = 7/145 (4%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCKS 671
R +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 178 RRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKR 237
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y E G D D + + KR RTT T +QL+ L+ + P E+
Sbjct: 238 DYEEAKAKGLY-LDGSLDGDQPN-----KRPRTTITAKQLETLKTAYNNSPKPARHVREQ 291
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
++Q TGL RV QVWFQN RA++K+
Sbjct: 292 LSQDTGLDMRVVQVWFQNRRAKEKR 316
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 260 KRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 316
>gi|344284256|ref|XP_003413884.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2-like [Loxodonta africana]
Length = 356
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 22/161 (13%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---L 674
KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++ + L
Sbjct: 85 KCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADHGLLL 144
Query: 675 ELVDGGTTSS-------------DDGADSESS-----HSKS-KAKRVRTTFTEEQLQVLQ 715
E G+ S D GA + S H ++ K RVRT E+QL L+
Sbjct: 145 ERAAAGSPRSPGPLPGARGLHLPDPGAGRQPSLRPHVHKQTEKTTRVRTVLNEKQLHTLR 204
Query: 716 ANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 205 TCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 245
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 187 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 245
>gi|62859483|ref|NP_001016082.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|89269010|emb|CAJ81605.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|189441838|gb|AAI67665.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624072|gb|AAI70608.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624092|gb|AAI70634.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
Length = 402
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 92/181 (50%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C GI+ SD VRKAR+ V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCK 116
Query: 671 SHYLEL---------------------------------VDGGTTSSDDGADSESSHSKS 697
Y D T+S + A++E+ S
Sbjct: 117 EDYASASSLKESSLNSVSSCTDRSLSPDLQDPIQDESKETDHSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TANNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|17551226|ref|NP_509273.1| Protein CEH-14 [Caenorhabditis elegans]
gi|21264444|sp|P20271.3|HM14_CAEEL RecName: Full=Homeobox protein ceh-14
gi|8572736|gb|AAF77181.1|AF244368_1 LIM homeobox protein CEH-14 [Caenorhabditis elegans]
gi|351063218|emb|CCD71294.1| Protein CEH-14 [Caenorhabditis elegans]
Length = 351
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 13/148 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
++ FG KCS C GI VRKA +HVYH+ CF C CKR L TGEEF L D R++C
Sbjct: 100 YKKFGTKCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADDARLVC 159
Query: 670 KSHYLELVDGGTTSSD-DGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
K Y + D + DG++ KR RTT + + L+ L+ +Q S P
Sbjct: 160 KDDYEQARDKHCNELEGDGSN----------KRPRTTISAKSLETLKQAYQTSSKPARHV 209
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 210 REQLASETGLDMRVVQVWFQNRRAKEKR 237
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT + + L+ L+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 181 KRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKEKR 237
>gi|52354701|gb|AAH82847.1| Unknown (protein for MGC:81549) [Xenopus laevis]
Length = 402
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 96/192 (50%), Gaps = 40/192 (20%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR FG KC+ C GI+ SD VRKAR+ V+HL CF C C +QLSTGEE
Sbjct: 46 RDSKLYCKTDFFRRFGTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 660 FALHEDRVLCKSHYLEL---------------------------------VDGGTTSSDD 686
+ + E++ +CK Y + D T+S +
Sbjct: 106 YIIDENKFVCKEDYTSVSSLKESSLNSVSSCTDRSLSPDLQDPIKDESKETDHSTSSDKE 165
Query: 687 GADSESSHSKSKAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
++E+ S KR RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TTNNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 745 VWFQNSRARQKK 756
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TTNNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|7511466|pir||T34266 LIM homeobox protein ceh-14 - Caenorhabditis elegans
Length = 348
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 13/148 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
++ FG KCS C GI VRKA +HVYH+ CF C CKR L TGEEF L D R++C
Sbjct: 97 YKKFGTKCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADDARLVC 156
Query: 670 KSHYLELVDGGTTSSD-DGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
K Y + D + DG++ KR RTT + + L+ L+ +Q S P
Sbjct: 157 KDDYEQARDKHCNELEGDGSN----------KRPRTTISAKSLETLKQAYQTSSKPARHV 206
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 207 REQLASETGLDMRVVQVWFQNRRAKEKR 234
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT + + L+ L+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 178 KRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKEKR 234
>gi|18858905|ref|NP_571037.1| insulin gene enhancer protein isl-1 [Danio rerio]
gi|1708559|sp|P53405.1|ISL1_DANRE RecName: Full=Insulin gene enhancer protein isl-1; Short=Islet-1
gi|497898|dbj|BAA04670.1| insulin gene enhancer binding protein [Danio rerio]
gi|38173895|gb|AAH60892.1| Isl1 protein [Danio rerio]
Length = 349
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ T + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERATMGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|549846|gb|AAA21644.1| LIM domain transcription factor LIM-1 [Homo sapiens]
Length = 404
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 93/182 (51%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCRQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR TT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPGTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ TT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 180 RRGPGTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|395845905|ref|XP_003795658.1| PREDICTED: LIM/homeobox protein Lhx1 [Otolemur garnettii]
Length = 407
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 95/183 (51%), Gaps = 38/183 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQ-VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
AKR RTT +QL+ +L+A F P E++AQ TGL+ RV QVWFQN R++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 235
Query: 754 QKK 756
+++
Sbjct: 236 ERR 238
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 16/97 (16%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQ-VLQANFQ 80
+PD D DSES++ K AKR RTT +QL+ +L+A F
Sbjct: 142 SPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLLKAAFA 201
Query: 81 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 202 ATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 238
>gi|444717046|gb|ELW57882.1| LIM/homeobox protein Lhx9 [Tupaia chinensis]
Length = 378
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SHY-------------------------LELVDGGTT----------SSDDGAD------ 689
+H+ L +G T S G D
Sbjct: 166 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGAGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 690 ----SESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
+E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
>gi|348535371|ref|XP_003455174.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oreochromis niloticus]
Length = 396
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 97/181 (53%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ +D VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL-----------------------ELVD---------GGTTSSD---DGADSESSHS 695
YL +L D +TSSD + ++E +S
Sbjct: 117 DDYLSSGAIKEVNLNSVSSCTDRSLSPDLQDPIQDDIKETDNSTSSDKETNNIENEEQNS 176
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GAKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T++ ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TNNIENEEQNSGAKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|324516282|gb|ADY46481.1| Homeobox protein ceh-14 [Ascaris suum]
Length = 324
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 14/147 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFAL--HEDRVLC 669
++ FG KCS C GI VR+A DHVYH+ACF C CKR+L TGE+F L + R++C
Sbjct: 71 YKRFGTKCSVCEEGICPDSVVRRANDHVYHVACFQCVICKRELRTGEQFYLIPTDGRLVC 130
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K+ Y E+ T D KR RTT + + L+ L+ +Q S P
Sbjct: 131 KTDY-EMAKNKETDVD-----------CNNKRPRTTISAKSLETLKQAYQASSKPARHVR 178
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 179 EQLAADTGLDMRVVQVWFQNRRAKEKR 205
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT + + L+ L+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 149 KRPRTTISAKSLETLKQAYQASSKPARHVREQLAADTGLDMRVVQVWFQNRRAKEKR 205
>gi|224493106|sp|A2PZF9.1|LHX9_RANRU RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|124377598|dbj|BAF46216.1| LIM homeobox gene 9 alpha protein [Glandirana rugosa]
Length = 379
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + LSTG+ F + E+ V +
Sbjct: 107 YRRFSVQRCARCHLGISASEIVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYRR 166
Query: 671 SHYLELVDG--------------------------------------------------- 679
+H+ LV G
Sbjct: 167 AHFELLVQGDFHSQLNYTELSAKGGGLSALPYFTNGTGAVQKGRPRKRKSPALGVDIINY 226
Query: 680 --GTTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G +D D + S+ S K KR+RT+F QL+ ++ F ++ NPD +DL+++AQ T
Sbjct: 227 TSGCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKT 286
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 287 GLTKRVLQVWFQNARAKFRRNL 308
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD +S K KR+RT+F QL+ ++ F ++ NPD +DL+++AQ TGL
Sbjct: 229 GCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTGL 288
Query: 100 SKRVTQVWFQNSRARQKKHL 119
+KRV QVWFQN+RA+ +++L
Sbjct: 289 TKRVLQVWFQNARAKFRRNL 308
>gi|268580151|ref|XP_002645058.1| C. briggsae CBR-CEH-14 protein [Caenorhabditis briggsae]
Length = 351
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 13/148 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
F+ FG KC+ C GI VRKA H+YH+ CF C CKR L TGEEF L D R++C
Sbjct: 100 FKKFGTKCASCEDGIVPDHVVRKASGHIYHVECFNCFICKRLLETGEEFYLIPDDARLVC 159
Query: 670 KSHYLELVDGGTTSSD-DGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
K Y + D + S+ DG + KR RTT + + L+ L+ +Q S P
Sbjct: 160 KDDYEQARDKQSAESEGDGGN----------KRPRTTISAKSLETLKQAYQTSSKPARHI 209
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 210 REQLASETGLDMRVVQVWFQNRRAKEKR 237
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 50 DSESSHSKSKA--KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 107
D +S+ S+ KR RTT + + L+ L+ +Q S P E++A TGL RV QVW
Sbjct: 168 DKQSAESEGDGGNKRPRTTISAKSLETLKQAYQTSSKPARHIREQLASETGLDMRVVQVW 227
Query: 108 FQNSRARQKK 117
FQN RA++K+
Sbjct: 228 FQNRRAKEKR 237
>gi|301609265|ref|XP_002934210.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Xenopus
(Silurana) tropicalis]
Length = 380
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C I S++V +A+ +VYHL CF C C RQL G+EF L + ++LCKS Y
Sbjct: 90 FAVKCGTCLDTITPSEFVMRAQKNVYHLGCFCCCVCDRQLQKGDEFVLKDGQLLCKSDYE 149
Query: 674 -----LELVDGGTTSS------------DDGADSESSHSKSKAKRVRTTFTEEQLQVLQA 716
L LV + S DD E + + KR RT T +Q + +A
Sbjct: 150 RERDLLSLVSPAASDSGKSEDEDDAGKFDDSKGPEDGKDQKRPKRPRTILTTQQRRAFKA 209
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 SFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 249
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D E + + KR RT T +Q + +A+F++ S P + E +A TGLS RV QV
Sbjct: 179 DSKGPEDGKDQKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQV 238
Query: 107 WFQNSRARQKK 117
WFQN RA+ KK
Sbjct: 239 WFQNQRAKMKK 249
>gi|258504711|gb|ACV72975.1| CEH-14 [Caenorhabditis remanei]
Length = 300
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 83/148 (56%), Gaps = 13/148 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
++ FG KC+ C GI VRKA H+YH+ CF C CKR L TGEEF L D R++C
Sbjct: 85 YKKFGTKCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVC 144
Query: 670 KSHYLELVDGGTTSSD-DGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
K Y + D T S+ DG++ KR RTT + + L L+ +Q S P
Sbjct: 145 KDDYEQARDKHTAESEGDGSN----------KRPRTTISAKSLDTLKQAYQASSKPARHV 194
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 195 REQLAAETGLDMRVVQVWFQNRRAKEKR 222
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 17 RTTFTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQ 76
RT T E+ ++ + +L D A +SE S KR RTT + + L L+
Sbjct: 125 RTLETGEEFYLIADDARLVCKDDYEQARDKHTAESEGDGSN---KRPRTTISAKSLDTLK 181
Query: 77 ANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 182 QAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRAKEKR 222
>gi|395505736|ref|XP_003757195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Sarcophilus harrisii]
Length = 404
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 23/165 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 170
Query: 675 ELVDGGTTSSDDGADSESSHSKS-----------------------KAKRVRTTFTEEQL 711
+ D ++ S D +DS S + + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQR 230
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 275
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 209 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 268
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 269 QRAKMKK 275
>gi|410922098|ref|XP_003974520.1| PREDICTED: insulin gene enhancer protein isl-1-like [Takifugu
rubripes]
Length = 331
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 92/168 (54%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL +D + C++
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALRDDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + +S D A+ S+ + + K RVRT E
Sbjct: 132 DH-DVVERASLASGDPLSPLHPARPLQMAAEPVSARTPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|327290473|ref|XP_003229947.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like, partial
[Anolis carolinensis]
Length = 293
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 86/162 (53%), Gaps = 20/162 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C I+ S +V +A+ +VYH+ACF C C++QL G+EF L E ++LC S Y
Sbjct: 2 FAVKCSNCFEAISPSQFVMRAQKNVYHVACFCCGVCEKQLQKGDEFVLKEGQLLCNSDYE 61
Query: 674 -----LELVDGGTTSSDDGAD--------------SESSHSKSKAKRVRTTFTEEQLQVL 714
L LV + +D SE + + KR RT T +Q +
Sbjct: 62 KECELLSLVSPAASDPGKSSDVENLCKMEEKTRKVSEDTKDHKRPKRPRTILTTQQRRAF 121
Query: 715 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 122 KASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKIKK 163
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE + + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 97 SEDTKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 156
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 157 QRAKIKK 163
>gi|334311511|ref|XP_003339631.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Monodelphis domestica]
Length = 401
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 23/165 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 170
Query: 675 ELVDGGTTSSDDGADSESSHSKS-----------------------KAKRVRTTFTEEQL 711
+ D ++ S D +DS S + + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQR 230
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 275
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 209 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 268
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 269 QRAKMKK 275
>gi|224493175|sp|Q90881.2|LHX9_CHICK RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFESLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+ T+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHMDRDQQPYPPSQKTKRMATSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+ T+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHMDRDQQPYPPSQKTKRMATSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNL 326
>gi|44194074|gb|AAS46773.1| insulin enhancer binding protein [Rattus norvegicus]
Length = 326
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTRYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTRYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|410903918|ref|XP_003965440.1| PREDICTED: LIM/homeobox protein Lhx5-like [Takifugu rubripes]
Length = 396
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 97/181 (53%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCLQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL-----------------------ELVD---------GGTTSSD---DGADSESSHS 695
+L +L D +TSSD + ++E +S
Sbjct: 117 EDFLSSGATKEANLNSVSSCTDRSLSPDLQDPTQDDIKETDNSTSSDKETNNIENEEQNS 176
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T++ ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 166 TNNIENEEQNSGTKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 225
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 226 VWFQNRRSKERR 237
>gi|395505734|ref|XP_003757194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Sarcophilus harrisii]
Length = 394
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 23/165 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 170
Query: 675 ELVDGGTTSSDDGADSESSHSKS-----------------------KAKRVRTTFTEEQL 711
+ D ++ S D +DS S + + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQR 230
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 275
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 209 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 268
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 269 QRAKMKK 275
>gi|395505738|ref|XP_003757196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Sarcophilus harrisii]
Length = 401
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 23/165 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 170
Query: 675 ELVDGGTTSSDDGADSESSHSKS-----------------------KAKRVRTTFTEEQL 711
+ D ++ S D +DS S + + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQR 230
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 275
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 209 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 268
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 269 QRAKMKK 275
>gi|258504705|gb|ACV72972.1| CEH-14 [Caenorhabditis remanei]
gi|258504707|gb|ACV72973.1| CEH-14 [Caenorhabditis remanei]
gi|258504709|gb|ACV72974.1| CEH-14 [Caenorhabditis remanei]
gi|258504713|gb|ACV72976.1| CEH-14 [Caenorhabditis remanei]
gi|258504717|gb|ACV72978.1| CEH-14 [Caenorhabditis remanei]
gi|258504719|gb|ACV72979.1| CEH-14 [Caenorhabditis remanei]
gi|258504721|gb|ACV72980.1| CEH-14 [Caenorhabditis remanei]
gi|258504723|gb|ACV72981.1| CEH-14 [Caenorhabditis remanei]
gi|258504727|gb|ACV72983.1| CEH-14 [Caenorhabditis remanei]
gi|258504729|gb|ACV72984.1| CEH-14 [Caenorhabditis remanei]
gi|258504731|gb|ACV72985.1| CEH-14 [Caenorhabditis remanei]
gi|258504733|gb|ACV72986.1| CEH-14 [Caenorhabditis remanei]
Length = 304
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
++ FG KC+ C GI VRKA H+YH+ CF C CKR L TGEEF L D R++C
Sbjct: 85 YKKFGTKCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVC 144
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K Y + D D A+SE S KR RTT + + L L+ +Q S P
Sbjct: 145 KDDYEQARD--KLGLPDTAESEGDGSN---KRPRTTISAKSLDTLKQAYQASSKPARHVR 199
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 200 EQLAAETGLDMRVVQVWFQNRRAKEKR 226
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 17 RTTFTEEQLQVLQANFQLDSNPDGFGA-DSTDHTDSESSHSKSKAKRVRTTFTEEQLQVL 75
RT T E+ ++ + +L D A D D+ S KR RTT + + L L
Sbjct: 125 RTLETGEEFYLIADDARLVCKDDYEQARDKLGLPDTAESEGDGSNKRPRTTISAKSLDTL 184
Query: 76 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 185 KQAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRAKEKR 226
>gi|334311509|ref|XP_001366137.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Monodelphis domestica]
Length = 394
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 23/165 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 170
Query: 675 ELVDGGTTSSDDGADSESSHSKS-----------------------KAKRVRTTFTEEQL 711
+ D ++ S D +DS S + + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSDEEDGDVKPAKGQGGQGKGSDDGKDPRRPKRPRTILTTQQR 230
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 275
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 209 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 268
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 269 QRAKMKK 275
>gi|258504715|gb|ACV72977.1| CEH-14 [Caenorhabditis remanei]
gi|258504725|gb|ACV72982.1| CEH-14 [Caenorhabditis remanei]
Length = 304
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
++ FG KC+ C GI VRKA H+YH+ CF C CKR L TGEEF L D R++C
Sbjct: 85 YKKFGTKCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVC 144
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K Y + D D A+SE S KR RTT + + L L+ +Q S P
Sbjct: 145 KDDYEQARD--KLGLPDTAESEGDGSN---KRPRTTISAKSLDTLKQAYQASSKPARHVR 199
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 200 EQLAAETGLDMRVVQVWFQNRRAKEKR 226
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 17 RTTFTEEQLQVLQANFQLDSNPDGFGA-DSTDHTDSESSHSKSKAKRVRTTFTEEQLQVL 75
RT T E+ ++ + +L D A D D+ S KR RTT + + L L
Sbjct: 125 RTLETGEEFYLIADDARLVCKDDYEQARDKLGLPDTAESEGDGSNKRPRTTISAKSLDTL 184
Query: 76 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 185 KQAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRAKEKR 226
>gi|45382197|ref|NP_990757.1| LIM/homeobox protein Lhx9 [Gallus gallus]
gi|556038|gb|AAA50258.1| homeobox protein [Gallus gallus]
Length = 378
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 165
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 166 AHFESLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+ T+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHMDRDQQPYPPSQKTKRMATSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+ T+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHMDRDQQPYPPSQKTKRMATSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
>gi|258504735|gb|ACV72987.1| CEH-14 [Caenorhabditis remanei]
Length = 304
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
++ FG KC+ C GI VRKA H+YH+ CF C CKR L TGEEF L D R++C
Sbjct: 85 YKKFGTKCASCTEGIVPDHVVRKASGHIYHVECFTCFICKRTLETGEEFYLIADDARLVC 144
Query: 670 KSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K Y + D D A+SE S KR RTT + + L L+ +Q S P
Sbjct: 145 KDDYEQARD--KLGLPDTAESEGDGSN---KRPRTTISAKSLDTLKQAYQASSKPARHVR 199
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK 756
E++A TGL RV QVWFQN RA++K+
Sbjct: 200 EQLAAETGLDMRVVQVWFQNRRAKEKR 226
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 17 RTTFTEEQLQVLQANFQLDSNPDGFGA-DSTDHTDSESSHSKSKAKRVRTTFTEEQLQVL 75
RT T E+ ++ + +L D A D D+ S KR RTT + + L L
Sbjct: 125 RTLETGEEFYLIADDARLVCKDDYEQARDKLGLPDTAESEGDGSNKRPRTTISAKSLDTL 184
Query: 76 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTG--KMKSSQNR 130
+ +Q S P E++A TGL RV QVWFQN RA++K+ + K+S NR
Sbjct: 185 KQAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRAKEKRLKKDAGRRWKTSSNR 241
>gi|241999336|ref|XP_002434311.1| lhx3, putative [Ixodes scapularis]
gi|215496070|gb|EEC05711.1| lhx3, putative [Ixodes scapularis]
Length = 252
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 87/144 (60%), Gaps = 19/144 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCKSHY 673
+G KC+ C GI + VR+A+D+VYHL CFAC CKRQL+TG+EF L ED +++CK
Sbjct: 24 YGTKCAGCELGIPPTQVVRRAQDNVYHLHCFACILCKRQLNTGDEFYLMEDNKLVCK--- 80
Query: 674 LELVDGGTTSSDDGADSESSHSK-SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
AD E++ ++ KR RTT T +QL+ L++ + P E++
Sbjct: 81 --------------ADYEAAKAREGSTKRPRTTITAKQLETLKSAYNNSPKPARHVREQL 126
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
+Q TGL RV QVWFQN RA++K+
Sbjct: 127 SQDTGLDMRVVQVWFQNRRAKEKR 150
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L++ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 94 KRPRTTITAKQLETLKSAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 150
>gi|306020805|gb|ADM79456.1| islet [Cupiennius salei]
Length = 249
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 91/182 (50%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR FG KC++C ++ SD+V +AR +YH+ CF C AC RQL G+EFAL ED + CKS
Sbjct: 12 FRLFGIKCARCNVSLSKSDFVMRARSQIYHIDCFRCIACARQLLPGDEFALKEDGLCCKS 71
Query: 672 HYLELV------DGGTTS---------------SDDGADSESSH---------------- 694
+ L +G T + + A++ES
Sbjct: 72 EHCTLAITDKKPNGHPTPNGHNGTTTNGTTLQMAGNPANAESMQTGRNRDSVRPQVHKQG 131
Query: 695 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R +
Sbjct: 132 SDHKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKD 191
Query: 755 KK 756
KK
Sbjct: 192 KK 193
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 115
S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R +
Sbjct: 132 SDHKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKD 191
Query: 116 KK 117
KK
Sbjct: 192 KK 193
>gi|397505116|ref|XP_003823119.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Pan paniscus]
gi|441624364|ref|XP_004088986.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Nomascus
leucogenys]
Length = 399
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 57/204 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SH--------------YLELV-------------------------------------DG 679
+H Y EL +
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 680 GTTSSDDGAD-----SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
G + +++ AD + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 245 GLSCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQ 304
Query: 735 ITGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 305 KTGLTKRVLQVWFQNARAKFRRNL 328
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 253 ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 311
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 312 VLQVWFQNARAKFRRNL 328
>gi|194223906|ref|XP_001916580.1| PREDICTED: insulin gene enhancer protein ISL-1 [Equus caballus]
Length = 349
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 EH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|403307412|ref|XP_003944189.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 399
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 57/204 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SH--------------YLELV-------------------------------------DG 679
+H Y EL +
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 680 GTTSSDDGAD-----SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
G + +++ AD + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 245 GLSCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQ 304
Query: 735 ITGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 305 KTGLTKRVLQVWFQNARAKFRRNL 328
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 253 ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 311
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 312 VLQVWFQNARAKFRRNL 328
>gi|344254045|gb|EGW10149.1| LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 397
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 90/160 (56%), Gaps = 15/160 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 62 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 121
Query: 671 SHYLELVDGGT---------TSSDDGADS-----ESSHSKSKAKRVRTTFTEEQLQVLQA 716
Y G S A+S S++ AKR RTT T +QL+ L+
Sbjct: 122 EDYETAKQNGCLGWGRRQRKPSCFSWANSIKVVFTVDDSEAGAKRPRTTITAKQLETLKN 181
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
++ P E+++ TGL RV QVWFQN RA++K+
Sbjct: 182 AYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 221
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 115
S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWFQN RA++
Sbjct: 160 SEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKE 219
Query: 116 KKHLHTGKMKSSQNRPKYGYY 136
K ++K R ++G +
Sbjct: 220 K------RLKKDAGRHRWGQF 234
>gi|46276325|gb|AAS86421.1| lhx9 [Oryzias latipes]
Length = 237
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 55/191 (28%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+ H+ LV
Sbjct: 47 RCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFETLV 106
Query: 678 DG-------------------------GTTSSDDGA------------------------ 688
G GT ++ G
Sbjct: 107 QGPDYHPQLNFAELAAKGGGLALPYFNGTGTTQKGRPRKRKSPAMGIDIPSYNTGCNEND 166
Query: 689 ------DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRV 742
D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV
Sbjct: 167 TDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRV 226
Query: 743 TQVWFQNSRAR 753
QVWFQN+RA+
Sbjct: 227 LQVWFQNARAK 237
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 40 GFGADSTDHTD--SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + TDH D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 161 GCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 220
Query: 98 GLSKRVTQVWFQNSRAR 114
GL+KRV QVWFQN+RA+
Sbjct: 221 GLTKRVLQVWFQNARAK 237
>gi|311253923|ref|XP_003125689.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Sus
scrofa]
Length = 382
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAPEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 52 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 111
E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 187 EDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQ 246
Query: 112 RARQKK 117
RA+ KK
Sbjct: 247 RAKMKK 252
>gi|410986204|ref|XP_003999402.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Felis catus]
Length = 380
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 57/204 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SH--------------YLELVD----------GGTTSSDDG------------------- 687
+H Y EL GT + G
Sbjct: 166 AHFETLLQGEYTPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 688 ----ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 226 ALSCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQ 285
Query: 735 ITGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 286 KTGLTKRVLQVWFQNARAKFRRNL 309
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 234 ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 292
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 293 VLQVWFQNARAKFRRNL 309
>gi|345803062|ref|XP_857156.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 4 [Canis lupus
familiaris]
Length = 380
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 57/204 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SH--------------YLELVD----------GGTTSSDDG------------------- 687
+H Y EL GT + G
Sbjct: 166 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 688 ----ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 226 ALGCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQ 285
Query: 735 ITGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 286 KTGLTKRVLQVWFQNARAKFRRNL 309
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 228 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 287
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 288 GLTKRVLQVWFQNARAKFRRNL 309
>gi|18858979|ref|NP_571282.1| LIM homeobox 1b [Danio rerio]
gi|2155289|gb|AAB58796.1| LIM class homeodomain protein [Danio rerio]
gi|190336839|gb|AAI62280.1| LIM homeobox 1b [Danio rerio]
gi|190340149|gb|AAI62303.1| LIM homeobox 1b [Danio rerio]
Length = 402
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 91/180 (50%), Gaps = 35/180 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR +G KC C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + L E + +CK
Sbjct: 56 FRRYGTKCGGCAQGISPSDLVRKARSKVFHLNCFTCIMCNKQLSTGEELYILDEYKFVCK 115
Query: 671 SHYLELVDGGTTS-------------------SDDGADSESSHSKSK------------- 698
YL +G T+ DD DSES K
Sbjct: 116 EDYLNNSNGKDTNLLSITTCSDPSLSPESQDPQDDYKDSESGPMSDKETCNNENDEQNLG 175
Query: 699 AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 176 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 235
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 177 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 235
>gi|440908077|gb|ELR58138.1| Insulin enhancer protein ISL-1, partial [Bos grunniens mutus]
Length = 359
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 82 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 141
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 142 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 200
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 201 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|426217051|ref|XP_004002767.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Ovis aries]
Length = 382
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 85/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGAD---------------SESSHSKSKAKRVRTTFTEEQLQV 713
L LV + S D SE S + KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDSKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE S + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 SEDSKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|354486854|ref|XP_003505592.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Cricetulus griseus]
Length = 382
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 SEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|158187529|ref|NP_001099437.2| LIM homeobox transcription factor 1 alpha [Rattus norvegicus]
Length = 382
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 SEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|17298670|ref|NP_387501.1| LIM homeobox transcription factor 1-alpha [Mus musculus]
gi|27923804|sp|Q9JKU8.1|LMX1A_MOUSE RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|7230571|gb|AAF43012.1|AF226662_1 lim homeodomain-containing transcription factor [Mus musculus]
gi|26336939|dbj|BAC32153.1| unnamed protein product [Mus musculus]
gi|80477081|gb|AAI09168.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
gi|80478204|gb|AAI09169.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 382
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 SEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|311213854|ref|NP_001185656.1| LIM homeobox 9 [Taeniopygia guttata]
Length = 378
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 165
Query: 671 SHY-------------------------LELVDGGTT-------------------SSDD 686
+H+ L +G T S +
Sbjct: 166 AHFESLLQGEYPPQLSYTELAAKSGGLALPYFNGAGTVQKGRPRKRKSPALGVDIVSYNS 225
Query: 687 GAD-SESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G + +E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ +++L
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNL 307
>gi|358333778|dbj|GAA52242.1| LIM homeobox protein 3/4, partial [Clonorchis sinensis]
Length = 405
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 13/146 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCK 670
FR FG KC+ C RGI ++ VR A+D+VYH+ CFAC C R L+TG+EF L DR ++CK
Sbjct: 40 FRRFGTKCAGCERGIPPTEVVRTAQDNVYHMDCFACVICDRLLNTGDEFYLLRDRKLMCK 99
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ + A + S S KR RTT T +QL+ L+ + P E
Sbjct: 100 YDF------------ETAKARESELDSANKRPRTTITAKQLEALKRAYNESPKPVRHVRE 147
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 148 QLSAETGLDMRVVQVWFQNRRAKEKR 173
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
S KR RTT T +QL+ L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 114 SANKRPRTTITAKQLEALKRAYNESPKPVRHVREQLSAETGLDMRVVQVWFQNRRAKEKR 173
>gi|547859|sp|Q04650.1|LMX1A_MESAU RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein LMX1A; Short=LIM/homeobox
protein 1; Short=LMX-1
gi|587461|emb|CAA57163.1| lmx1.1 [Mesocricetus auratus]
Length = 382
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTSEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 SEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|114571656|ref|XP_001139158.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan troglodytes]
Length = 399
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 57/204 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SH--------------YLELVD----------GGTTSSDDG------------------- 687
+H Y EL GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 ----ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 245 ALCCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQ 304
Query: 735 ITGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 305 KTGLTKRVLQVWFQNARAKFRRNL 328
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 253 ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 311
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 312 VLQVWFQNARAKFRRNL 328
>gi|358414621|ref|XP_003582878.1| PREDICTED: LIM homeobox transcription factor 1-beta [Bos taurus]
Length = 315
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 24 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 83
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 84 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 143
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 144 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 189
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 114 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 173
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 174 RVVQVWFQNQRAKMKK 189
>gi|344276910|ref|XP_003410248.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Loxodonta africana]
Length = 380
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 57/204 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SH--------------YLELVD----------GGTTSSDDG------------------- 687
+H Y EL GT + G
Sbjct: 166 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDMVNYNS 225
Query: 688 ----ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 226 ALCCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQ 285
Query: 735 ITGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 286 KTGLTKRVLQVWFQNARAKFRRNL 309
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 234 ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 292
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 293 VLQVWFQNARAKFRRNL 309
>gi|340376997|ref|XP_003387017.1| PREDICTED: hypothetical protein LOC100634814 [Amphimedon
queenslandica]
Length = 263
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 29/250 (11%)
Query: 346 KQRVLTRIVEGQSSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEM 405
KQR+L E ++S WL+ +P S FDL+ FRD++ +RY L+ LP+ C C
Sbjct: 10 KQRLLDVACEREASVWLSALPLSDHGFDLNKGSFRDSICIRYGWQLQDLPSSC-VCDSSF 68
Query: 406 SVTHALNCKKGGLVKHGHDYLRDECIMMASYAWNGIVKEPIMRDSSSTSPALI------- 458
+V HAL+C GG H+ LRD + S + + +EP ++ S S +
Sbjct: 69 TVDHALSCPMGGFPTLRHNDLRDLTASLMSEVCSNVSREPALQPISGESITVSTVDGDGA 128
Query: 459 -ADFKINGVWEAGGT----AFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAED 513
AD + W GT AFFD +VN + SY + ++ K KY+ +
Sbjct: 129 RADVAADDFW---GTSHQRAFFDVAVVNPFSDSYKGLDLPAVYRKVEARKKRKYDVRIRE 185
Query: 514 LR-ASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEFSILKAVS 572
+ F+PLV ST+G L +S+K K Y V++++R + FSIL++
Sbjct: 186 VEHGCFSPLVFSTNGGLA------------PVSDKLNKPYSSVINFIRCKLSFSILRSTI 233
Query: 573 LRLRGTRQIV 582
+RGTR+++
Sbjct: 234 RCVRGTRRLI 243
>gi|395825137|ref|XP_003785798.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Otolemur
garnettii]
Length = 382
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAAEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 AEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|395510266|ref|XP_003759400.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2
[Sarcophilus harrisii]
Length = 354
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|300797454|ref|NP_001178254.1| LIM homeobox transcription factor 1-alpha [Bos taurus]
gi|296489924|tpg|DAA32037.1| TPA: LIM homeobox transcription factor 1 alpha-like [Bos taurus]
Length = 382
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 85/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGAD---------------SESSHSKSKAKRVRTTFTEEQLQV 713
L LV + S D SE S + KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDSKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE S + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 SEDSKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|344287033|ref|XP_003415260.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Loxodonta
africana]
Length = 382
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEENLCKSAHGAGKGAAEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 AEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|28893581|ref|NP_796372.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|291327513|ref|NP_001167540.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|109019319|ref|XP_001084612.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Macaca mulatta]
gi|109019321|ref|XP_001084727.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3
[Macaca mulatta]
gi|114561083|ref|XP_001174539.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
troglodytes]
gi|114561085|ref|XP_001174542.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3 [Pan
troglodytes]
gi|296229940|ref|XP_002760489.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Callithrix
jacchus]
gi|397508364|ref|XP_003824628.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1 [Pan
paniscus]
gi|397508366|ref|XP_003824629.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
paniscus]
gi|402858034|ref|XP_003893535.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Papio anubis]
gi|402858036|ref|XP_003893536.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Papio anubis]
gi|426332555|ref|XP_004027869.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Gorilla gorilla gorilla]
gi|426332557|ref|XP_004027870.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Gorilla gorilla gorilla]
gi|27923801|sp|Q8TE12.1|LMX1A_HUMAN RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|19879681|gb|AAL82892.1| LIM homeobox transcription factor 1 alpha [Homo sapiens]
gi|119611150|gb|EAW90744.1| LIM homeobox transcription factor 1, alpha, isoform CRA_b [Homo
sapiens]
gi|182887815|gb|AAI60062.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|193785405|dbj|BAG54558.1| unnamed protein product [Homo sapiens]
gi|208966672|dbj|BAG73350.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|355558990|gb|EHH15770.1| hypothetical protein EGK_01906 [Macaca mulatta]
gi|355746154|gb|EHH50779.1| hypothetical protein EGM_01656 [Macaca fascicularis]
Length = 382
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 AEEGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|123907024|sp|Q1LWV4.1|LHX9_DANRE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|94732381|emb|CAK04966.1| novel protein similar to vertebrate LIM homeobox 9 (LHX9) [Danio
rerio]
gi|190339118|gb|AAI63023.1| Lhx9 protein [Danio rerio]
gi|190339147|gb|AAI63060.1| Lhx9 protein [Danio rerio]
gi|190339149|gb|AAI63073.1| Lhx9 protein [Danio rerio]
Length = 396
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 184
Query: 671 SH--------------YLEL--------------------------------VDGGTTSS 684
H Y EL +D G+ SS
Sbjct: 185 VHFETLIQGEYHPQLNYAELAAKGGGLALPYFNGTGTVQKGRPRKRKSPAMGIDIGSYSS 244
Query: 685 ----DDG----ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
+D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENDADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ ++++
Sbjct: 305 GLTKRVLQVWFQNARAKFRRNV 326
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 32 FQLDSNPDGFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 89
+ S G + DH D + K KR+RT+F QL+ +++ F ++ NPD +D
Sbjct: 237 IDIGSYSSGCNENDADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKD 296
Query: 90 LERIAQITGLSKRVTQVWFQNSRARQKKHL 119
L+++AQ TGL+KRV QVWFQN+RA+ ++++
Sbjct: 297 LKQLAQKTGLTKRVLQVWFQNARAKFRRNV 326
>gi|444721284|gb|ELW62028.1| LIM homeobox transcription factor 1-beta [Tupaia chinensis]
Length = 471
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 89/168 (52%), Gaps = 24/168 (14%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK
Sbjct: 5 RLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGD 64
Query: 673 YLELVDGGTTSSDDGADSESSHSKS------------------------KAKRVRTTFTE 708
Y + D ++ S D +DS S + + KR RT T
Sbjct: 65 YEKEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQNKGSGDDGKDPRRPKRPRTILTT 124
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 125 QQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 172
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 97 GQGSQNKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 156
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 157 RVVQVWFQNQRAKMKK 172
>gi|431908581|gb|ELK12174.1| Insulin protein enhancer protein ISL-1 [Pteropus alecto]
Length = 383
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 106 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 165
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 166 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 224
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 225 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 272
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 214 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 272
>gi|308097158|gb|ADO14133.1| ISL1 transcription factor [Notophthalmus viridescens]
Length = 349
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 91/168 (54%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF+C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFSCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAADPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|403272543|ref|XP_003928115.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Saimiri boliviensis boliviensis]
gi|403272545|ref|XP_003928116.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 382
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 AEEGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|237512911|dbj|BAA07578.2| LIM homeodomain protein Hr-Lhx3 a-form [Halocynthia roretzi]
Length = 690
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 17/157 (10%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEF 660
R +++ C F+ FG KC+ C GI ++ +R+A+D+VYHL CF C C ++ TG++F
Sbjct: 323 RGNLVFCKDDFFKRFGTKCTACGHGIPPTEVIRRAQDNVYHLECFCCFLCHEKMGTGDQF 382
Query: 661 ALHED-RVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQ 719
L ED R++CK Y + A S + ++ KR RTT T +QL+ L++ +
Sbjct: 383 YLLEDNRLVCKKDY------------EQAKSRDADIENGVKRPRTTITAKQLETLKSAYN 430
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P E+++ TGL RV QVWFQN RA++K+
Sbjct: 431 QSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 467
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
KR RTT T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K
Sbjct: 410 VKRPRTTITAKQLETLKSAYNQSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEK--- 466
Query: 120 HTGKMKSSQNRPKYGYY 136
++K R ++G++
Sbjct: 467 ---RIKRDTGRQRWGHF 480
>gi|345797790|ref|XP_851352.2| PREDICTED: LIM homeobox transcription factor 1-alpha [Canis lupus
familiaris]
Length = 382
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAAEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 AEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|301768533|ref|XP_002919684.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Ailuropoda
melanoleuca]
Length = 349
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGTGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|149755774|ref|XP_001493379.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Equus
caballus]
Length = 382
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGTGKGAAEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
A T +E + KR RT T +Q + +A+F++ S P + E +A TGLS R
Sbjct: 178 AHGTGKGAAEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVR 237
Query: 103 VTQVWFQNSRARQKK 117
V QVWFQN RA+ KK
Sbjct: 238 VVQVWFQNQRAKMKK 252
>gi|426246540|ref|XP_004017051.1| PREDICTED: insulin gene enhancer protein ISL-1 [Ovis aries]
Length = 349
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLNPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|291397514|ref|XP_002715925.1| PREDICTED: LIM homeobox transcription factor 1 alpha-like
[Oryctolagus cuniculus]
Length = 382
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGTGKGAAEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
A T +E + KR RT T +Q + +A+F++ S P + E +A TGLS R
Sbjct: 178 AHGTGKGAAEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVR 237
Query: 103 VTQVWFQNSRARQKK 117
V QVWFQN RA+ KK
Sbjct: 238 VVQVWFQNQRAKMKK 252
>gi|533419|gb|AAA81946.1| ISL-1 [Homo sapiens]
Length = 346
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 69 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 128
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 129 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 187
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 188 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 235
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 177 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 235
>gi|444725137|gb|ELW65716.1| Insulin enhancer protein ISL-1 [Tupaia chinensis]
Length = 308
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 24/165 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
+G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++ +
Sbjct: 31 YGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH- 89
Query: 675 ELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTEEQL 711
++V+ + + D A+ S+ + K RVRT E+QL
Sbjct: 90 DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQL 149
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 150 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 194
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 136 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 194
>gi|126315044|ref|XP_001365199.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Monodelphis
domestica]
gi|395510264|ref|XP_003759399.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1
[Sarcophilus harrisii]
Length = 349
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|332258740|ref|XP_003278453.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1 [Nomascus
leucogenys]
Length = 374
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 88/175 (50%), Gaps = 37/175 (21%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQN 230
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDH----TDSESSHSKSK 59
S SS +K + TT ++ L + D D A+ +D +++ + +K
Sbjct: 120 SNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAK 179
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+ RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN
Sbjct: 180 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQN 230
>gi|123981310|gb|ABM82484.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
Length = 349
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|345304657|ref|XP_001508080.2| PREDICTED: insulin gene enhancer protein ISL-1-like
[Ornithorhynchus anatinus]
Length = 382
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 105 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 164
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 165 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 223
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 224 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 271
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 213 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 271
>gi|94400881|ref|NP_059035.3| insulin gene enhancer protein ISL-1 [Rattus norvegicus]
gi|115387114|ref|NP_002193.2| insulin gene enhancer protein ISL-1 [Homo sapiens]
gi|149642655|ref|NP_001092600.1| insulin gene enhancer protein ISL-1 [Bos taurus]
gi|162287065|ref|NP_067434.3| insulin gene enhancer protein ISL-1 [Mus musculus]
gi|291395329|ref|XP_002714072.1| PREDICTED: islet-1 [Oryctolagus cuniculus]
gi|311273676|ref|XP_003133982.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Sus scrofa]
gi|332254884|ref|XP_003276562.1| PREDICTED: insulin gene enhancer protein ISL-1 [Nomascus
leucogenys]
gi|332821395|ref|XP_001150633.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2 [Pan
troglodytes]
gi|344272509|ref|XP_003408074.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Loxodonta
africana]
gi|345799577|ref|XP_853721.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1 [Canis
lupus familiaris]
gi|348568904|ref|XP_003470238.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cavia
porcellus]
gi|354472426|ref|XP_003498440.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cricetulus
griseus]
gi|395818859|ref|XP_003782831.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Otolemur
garnettii]
gi|397514229|ref|XP_003827396.1| PREDICTED: insulin gene enhancer protein ISL-1 [Pan paniscus]
gi|402871509|ref|XP_003899703.1| PREDICTED: insulin gene enhancer protein ISL-1 [Papio anubis]
gi|403267625|ref|XP_003925922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Saimiri boliviensis
boliviensis]
gi|410949527|ref|XP_003981473.1| PREDICTED: insulin gene enhancer protein ISL-1 [Felis catus]
gi|47606422|sp|P61374.1|ISL1_RAT RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606423|sp|P61371.1|ISL1_HUMAN RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606424|sp|P61372.1|ISL1_MOUSE RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606425|sp|P61373.1|ISL1_MESAU RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|2137056|pir||I67418 transcription factor isl-1 - hamster
gi|4261764|gb|AAD14064.1|S70721_1 homeobox [Homo sapiens]
gi|545787|gb|AAB30128.1| homeobox [Rattus sp.]
gi|4469284|emb|CAB38446.1| Lim-homeodomain protein Islet1 [Mus musculus]
gi|22658390|gb|AAH31213.1| ISL LIM homeobox 1 [Homo sapiens]
gi|30065750|gb|AAP20776.1| Isl-1 [Cricetulus sp.]
gi|119575256|gb|EAW54861.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [Homo
sapiens]
gi|123996141|gb|ABM85672.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
gi|124298178|gb|AAI32264.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|124375804|gb|AAI32610.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|148686421|gb|EDL18368.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_b [Mus
musculus]
gi|148877422|gb|AAI46164.1| ISL1 protein [Bos taurus]
gi|149059388|gb|EDM10395.1| ISL1 transcription factor, LIM/homeodomain 1 [Rattus norvegicus]
gi|157928248|gb|ABW03420.1| ISL LIM homeobox 1 [synthetic construct]
gi|261861196|dbj|BAI47120.1| ISL LIM homeobox 1 [synthetic construct]
gi|296475787|tpg|DAA17902.1| TPA: islet-1 [Bos taurus]
gi|351712707|gb|EHB15626.1| Insulin gene enhancer protein ISL-1 [Heterocephalus glaber]
gi|355691298|gb|EHH26483.1| Insulin gene enhancer protein ISL-1 [Macaca mulatta]
gi|226841|prf||1608207A insulin gene enhancer binding protein Isl-1
Length = 349
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|355567904|gb|EHH24245.1| LIM/homeobox protein LMX1B [Macaca mulatta]
Length = 367
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 76 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 135
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 136 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 195
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 196 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 241
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 166 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 225
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 226 RVVQVWFQNQRAKMKK 241
>gi|312075111|ref|XP_003140272.1| hypothetical protein LOAG_04687 [Loa loa]
Length = 136
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 67/95 (70%), Gaps = 11/95 (11%)
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+EL++G E K+K KRVRTTF EEQL VLQ +FQ+DSNPDG DLERIA
Sbjct: 1 MELIEG-----------ECGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIA 49
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQN 768
+TGLSKRVTQVWFQNSRARQKK+ K ++ N
Sbjct: 50 TMTGLSKRVTQVWFQNSRARQKKYQGNKKNRTGHN 84
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
+ E K+K KRVRTTF EEQL VLQ +FQ+DSNPDG DLERIA +TGLSKRVTQVWFQ
Sbjct: 5 EGECGQQKAKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQVWFQ 64
Query: 110 NSRARQKKHLHTGKMKSSQN 129
NSRARQKK+ K ++ N
Sbjct: 65 NSRARQKKYQGNKKNRTGHN 84
>gi|355763645|gb|EHH62200.1| LIM/homeobox protein LMX1B [Macaca fascicularis]
Length = 379
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 92 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 151
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 152 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 211
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 212 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 257
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 182 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 241
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 242 RVVQVWFQNQRAKMKK 257
>gi|332220030|ref|XP_003259160.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Nomascus leucogenys]
Length = 368
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGTAEEGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 AEEGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|301608740|ref|XP_002933954.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Xenopus
(Silurana) tropicalis]
Length = 533
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 15/157 (9%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC+ C + + S+ + + +VYH+ACF C C+R+L G+EF L E ++LC+S Y
Sbjct: 241 FATKCNSCLKTVLPSELIMRVLSNVYHVACFFCCECERRLERGDEFVLKEGQLLCRSDYE 300
Query: 674 --------LELVDGGTTSS--DDGAD----SESSHSKSKAKRVRTTFTEEQLQVLQANFQ 719
L L G+ S +DGA S+ ++KR RT T +Q + +A+F+
Sbjct: 301 REKEMLSALSLTPSGSVKSEDEDGASLQGKSDEGKDPKRSKRPRTILTTQQRRAFKASFE 360
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ S P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 361 VSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 397
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ ++KR RT T +Q + +A+F++ S P + E +A TGL+ RV QVWFQN
Sbjct: 331 SDEGKDPKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQN 390
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 391 QRAKMKK 397
>gi|281342386|gb|EFB17970.1| hypothetical protein PANDA_008333 [Ailuropoda melanoleuca]
Length = 340
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 63 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 122
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 123 DH-DVVERASLGTGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 181
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 182 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 229
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 171 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 229
>gi|28569978|dbj|BAC57891.1| transcription factor islet-1 isoform beta [Mus musculus]
gi|148686420|gb|EDL18367.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_a [Mus
musculus]
Length = 326
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|158254920|dbj|BAF83431.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|345805844|ref|XP_003435360.1| PREDICTED: LIM homeobox transcription factor 1-beta [Canis lupus
familiaris]
Length = 487
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 196 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 255
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 256 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 315
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 316 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 361
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 303 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 361
>gi|348555669|ref|XP_003463646.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Cavia
porcellus]
Length = 371
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD V+H+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVFHVECFRCAVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y---LELVDGGTTSSDDGADSESS------------------HSKS-KAKRVRTTFTEEQ 710
+ LE G+ S + H ++ K RVRT E+Q
Sbjct: 143 HGLLLERAAAGSPRSPGPIPGARALHLPEPVPGQQPALRPHVHKQAEKTTRVRTVLNEKQ 202
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 203 LHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
>gi|61200414|gb|AAX39779.1| ISL1 transcription factor, partial [Ovis aries]
Length = 243
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 30 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 89
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 90 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 148
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 149 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 196
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 138 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 196
>gi|49659006|emb|CAD37944.1| homeobox protein LHX [Suberites domuncula]
Length = 342
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 19/146 (13%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCKS 671
R FG +C+ C + I + VR+A+++VYHL CFAC C RQLSTG+EF L +D +++CK
Sbjct: 172 RRFGTRCAGCNQPIPPTQVVRRAQENVYHLQCFACFICSRQLSTGDEFYLMDDKKLVCK- 230
Query: 672 HYLELVDGGTTSSDDGADSESSHSK-SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
AD E++ +K KR RTT T +QL L+A + + S P E
Sbjct: 231 ----------------ADYEAARAKDGNQKRPRTTITSKQLDTLKAAYTVSSKPSRAVRE 274
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++A TGL RV QVWFQN RA+ K+
Sbjct: 275 QLANETGLEVRVVQVWFQNRRAKDKR 300
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 50 DSESSHSK-SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
D E++ +K KR RTT T +QL L+A + + S P E++A TGL RV QVWF
Sbjct: 232 DYEAARAKDGNQKRPRTTITSKQLDTLKAAYTVSSKPSRAVREQLANETGLEVRVVQVWF 291
Query: 109 QNSRARQKK 117
QN RA+ K+
Sbjct: 292 QNRRAKDKR 300
>gi|335296199|ref|XP_003130643.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sus scrofa]
Length = 399
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 57/204 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SH--------------YLELVD----------GGTTSSDDG------------------- 687
+H Y EL GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 ----ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 245 ALCCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQ 304
Query: 735 ITGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 305 KTGLTKRVLQVWFQNARAKFRRNL 328
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 253 ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 311
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 312 VLQVWFQNARAKFRRNL 328
>gi|219520075|gb|AAI43802.1| LMX1B protein [Homo sapiens]
Length = 383
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 148 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 207
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 178 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 237
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 238 RVVQVWFQNQRAKMKK 253
>gi|57613|emb|CAA37349.1| insulin gene enhancer binding protein [Rattus rattus]
Length = 313
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 69 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 128
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 129 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 187
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 188 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 235
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 177 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 235
>gi|440898169|gb|ELR49722.1| LIM homeobox transcription factor 1-beta [Bos grunniens mutus]
Length = 392
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 101 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 160
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 161 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 220
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 221 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 266
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 191 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 250
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 251 RVVQVWFQNQRAKMKK 266
>gi|348569787|ref|XP_003470679.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Cavia
porcellus]
Length = 402
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPTKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 201 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 260
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 261 RVVQVWFQNQRAKMKK 276
>gi|292494913|ref|NP_001167617.1| LIM homeobox transcription factor 1-beta isoform 3 [Homo sapiens]
Length = 406
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 201 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 260
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 261 RVVQVWFQNQRAKMKK 276
>gi|432889048|ref|XP_004075119.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 357
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 20/165 (12%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F F AKCS C IA++D V +A + VYHL+CF C C+ QL G+EF L E ++ CK
Sbjct: 118 FGLFSAKCSGCLERIAATDLVIRALERVYHLSCFCCCICEHQLCKGDEFVLKEGQLFCKK 177
Query: 672 HY-----LELVDGGTTSSD---DGADSESSHSKS------------KAKRVRTTFTEEQL 711
Y L G + SD D ++ES H + + KR RT T +Q
Sbjct: 178 DYDKERNLSSTGGDNSDSDKSRDDFEAESEHFVTAVKGSDDNKDPFRPKRPRTILTTQQR 237
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 238 RTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 282
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 31 NFQLDSNPDGFGADS----TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 86
N D + D F A+S T S+ + + KR RT T +Q + +A+F++ S P
Sbjct: 192 NSDSDKSRDDFEAESEHFVTAVKGSDDNKDPFRPKRPRTILTTQQRRTFKASFEVSSKPC 251
Query: 87 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ E +A TGLS RV QVWFQN RA+ KK
Sbjct: 252 RKVRETLAAETGLSVRVVQVWFQNQRAKMKK 282
>gi|45382271|ref|NP_990745.1| insulin gene enhancer protein ISL-1 [Gallus gallus]
gi|1708560|sp|P50211.1|ISL1_CHICK RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|531179|gb|AAA62171.1| amino acid feature: LIM1, bp 331 .. 483; amino acid feature: LIM2,
bp 517 .. 669; amino acid feature: homeodomain, bp 820
.. 999 [Gallus gallus]
Length = 349
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|326910973|ref|XP_003201838.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Meleagris gallopavo]
Length = 299
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 16/160 (10%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F KCS C + IA S+ + + ++VYH+ CF C C+R+L G+EF L E ++LC+S
Sbjct: 13 RLFQTKCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSD 72
Query: 673 Y------LELVDGGTTSSDDGADSESSHSKSK----------AKRVRTTFTEEQLQVLQA 716
Y L + T S D + SHS K +KR RT T +Q + +A
Sbjct: 73 YEKEKEMLSAISPTPTESVKSEDEDGSHSHGKGSEDSKDHKRSKRPRTILTTQQRRAFKA 132
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+F++ S P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 133 SFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 172
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE S ++KR RT T +Q + +A+F++ S P + E +A TGL+ RV QVWFQN
Sbjct: 106 SEDSKDHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQN 165
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 166 QRAKMKK 172
>gi|297685372|ref|XP_002820264.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Pongo abelii]
Length = 383
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 148 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 207
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 178 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 237
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 238 RVVQVWFQNQRAKMKK 253
>gi|410979116|ref|XP_003995932.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Felis catus]
Length = 406
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 201 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 260
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 261 RVVQVWFQNQRAKMKK 276
>gi|297271296|ref|XP_002800229.1| PREDICTED: LIM homeobox transcription factor 1-beta [Macaca
mulatta]
Length = 385
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 148 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 207
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 178 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 237
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 238 RVVQVWFQNQRAKMKK 253
>gi|292494915|ref|NP_001167618.1| LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
gi|301761896|ref|XP_002916366.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 1
[Ailuropoda melanoleuca]
gi|344271902|ref|XP_003407776.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Loxodonta africana]
gi|410979112|ref|XP_003995930.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Felis catus]
gi|281340079|gb|EFB15663.1| hypothetical protein PANDA_004429 [Ailuropoda melanoleuca]
Length = 402
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 201 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 260
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 261 RVVQVWFQNQRAKMKK 276
>gi|255759880|ref|NP_034855.2| LIM homeobox transcription factor 1-beta [Mus musculus]
gi|109112190|ref|XP_001097412.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Macaca mulatta]
gi|297685370|ref|XP_002820263.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Pongo abelii]
gi|395824199|ref|XP_003785358.1| PREDICTED: LIM homeobox transcription factor 1-beta [Otolemur
garnettii]
gi|403299811|ref|XP_003940668.1| PREDICTED: LIM homeobox transcription factor 1-beta [Saimiri
boliviensis boliviensis]
gi|410979114|ref|XP_003995931.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Felis catus]
gi|341940912|sp|O88609.2|LMX1B_MOUSE RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3132909|gb|AAC39738.1| LIM homeodomain protein LMX1B [Homo sapiens]
gi|47479658|gb|AAH69601.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|85567565|gb|AAI12121.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|109731283|gb|AAI13492.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|111600533|gb|AAI19170.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|116138517|gb|AAI25470.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|119608048|gb|EAW87642.1| LIM homeobox transcription factor 1, beta, isoform CRA_b [Homo
sapiens]
gi|148676655|gb|EDL08602.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|312150934|gb|ADQ31979.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|313882992|gb|ADR82982.1| LIM homeobox transcription factor 1, beta (LMX1B) [synthetic
construct]
Length = 372
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 148 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 207
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 178 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 237
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 238 RVVQVWFQNQRAKMKK 253
>gi|8247930|sp|O60663.2|LMX1B_HUMAN RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3335524|gb|AAC27294.1| LIM homeodomain protein [Homo sapiens]
gi|119608047|gb|EAW87641.1| LIM homeobox transcription factor 1, beta, isoform CRA_a [Homo
sapiens]
Length = 379
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 148 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 207
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 178 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 237
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 238 RVVQVWFQNQRAKMKK 253
>gi|395531047|ref|XP_003767594.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Sarcophilus
harrisii]
Length = 380
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 57/204 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 165
Query: 671 SH--------------YLELV-------------------------------------DG 679
+H Y EL +
Sbjct: 166 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 680 GTTSSDDGAD-----SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
G + +++ AD + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 226 GLSCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQ 285
Query: 735 ITGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 286 KTGLTKRVLQVWFQNARAKFRRNL 309
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 234 ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 292
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 293 VLQVWFQNARAKFRRNL 309
>gi|351696220|gb|EHA99138.1| LIM homeobox transcription factor 1-alpha [Heterocephalus glaber]
Length = 382
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDG-ADSESSHSKS----------------KAKRVRTTFTEEQL 711
L LV +SD G +D E S KS + KR RT T +Q
Sbjct: 150 KERELLSLVS--PAASDSGKSDDEESLCKSAQGTGKGATEDGKDHKRPKRPRTILTTQQR 207
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
A T +E + KR RT T +Q + +A+F++ S P + E +A TGLS R
Sbjct: 178 AQGTGKGATEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVR 237
Query: 103 VTQVWFQNSRARQKK 117
V QVWFQN RA+ KK
Sbjct: 238 VVQVWFQNQRAKMKK 252
>gi|410979118|ref|XP_003995933.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 4
[Felis catus]
Length = 382
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 148 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 207
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 178 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 237
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 238 RVVQVWFQNQRAKMKK 253
>gi|292494911|ref|NP_002307.2| LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
gi|301761898|ref|XP_002916367.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 2
[Ailuropoda melanoleuca]
gi|344271898|ref|XP_003407774.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Loxodonta africana]
gi|306921455|dbj|BAJ17807.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|387541732|gb|AFJ71493.1| LIM homeobox transcription factor 1-beta isoform 1 [Macaca mulatta]
Length = 395
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 201 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 260
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 261 RVVQVWFQNQRAKMKK 276
>gi|397473155|ref|XP_003808084.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Pan paniscus]
Length = 402
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 201 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 260
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 261 RVVQVWFQNQRAKMKK 276
>gi|385862228|ref|NP_001245353.1| LIM homeobox transcription factor 1-beta [Sus scrofa]
Length = 379
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 148 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 207
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 195 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
>gi|47480835|gb|AAH69588.1| LMX1B protein [Homo sapiens]
Length = 377
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 86 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 145
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 146 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 205
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 206 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 251
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 176 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 235
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 236 RVVQVWFQNQRAKMKK 251
>gi|301756737|ref|XP_002914217.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Ailuropoda melanoleuca]
Length = 382
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C +A +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAVAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGATEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 TEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|3348118|gb|AAC27793.1| LIM homeodomain protein [Mus musculus]
Length = 372
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 148 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 207
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 178 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 237
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 238 RVVQVWFQNQRAKMKK 253
>gi|348565813|ref|XP_003468697.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Cavia
porcellus]
Length = 382
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDG-ADSESSHSKS----------------KAKRVRTTFTEEQL 711
L LV +SD G +D E S KS + KR RT T +Q
Sbjct: 150 KERELLSLV--SPAASDSGKSDDEESLCKSSQGAGKGTPEDGKDHKRPKRPRTILTTQQR 207
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 52 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 111
E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 187 EDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQ 246
Query: 112 RARQKK 117
RA+ KK
Sbjct: 247 RAKMKK 252
>gi|29500723|gb|AAO74860.1| LMX1B [Canis lupus familiaris]
Length = 309
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 29 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 88
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 89 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 148
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 149 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 194
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 119 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 178
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 179 RVVQVWFQNQRAKMKK 194
>gi|339236721|ref|XP_003379915.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
gi|316977365|gb|EFV60475.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
Length = 262
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KCS C GI VRKA DHVYHL CF C C+R++ TG+EF YL
Sbjct: 5 FGTKCSGCKEGILPQAVVRKAHDHVYHLQCFKCAVCEREMKTGDEF------------YL 52
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
DG D +++ + KR RTT + +QL+ L+ +QL P ER+A
Sbjct: 53 MPSDGKIVCKGDFDITKNKDFDNSNKRPRTTISAKQLETLKHAYQLSPKPARHVRERLAL 112
Query: 735 ITGLSKRVTQVWFQNSRARQKK 756
TGL RV QVWFQN RA++K+
Sbjct: 113 DTGLDMRVVQVWFQNRRAKEKR 134
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
KR RTT + +QL+ L+ +QL P ER+A TGL RV QVWFQN RA++K
Sbjct: 78 KRPRTTISAKQLETLKHAYQLSPKPARHVRERLALDTGLDMRVVQVWFQNRRAKEK---- 133
Query: 121 TGKMKSSQNR-PKYGY 135
+MK NR K+G+
Sbjct: 134 --RMKKDNNRGSKWGH 147
>gi|301761900|ref|XP_002916368.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 3
[Ailuropoda melanoleuca]
Length = 406
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 201 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 260
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 261 RVVQVWFQNQRAKMKK 276
>gi|344271900|ref|XP_003407775.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Loxodonta africana]
Length = 406
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 201 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 260
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 261 RVVQVWFQNQRAKMKK 276
>gi|281348858|gb|EFB24442.1| hypothetical protein PANDA_002084 [Ailuropoda melanoleuca]
Length = 368
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 86/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C +A +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 76 FAVKCGGCFEAVAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 135
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 136 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGATEDGKDHKRPKRPRTILTTQQRRA 195
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 196 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 172 TEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 231
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 232 QRAKMKK 238
>gi|126306417|ref|XP_001367814.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 3 [Monodelphis
domestica]
Length = 380
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 57/204 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 165
Query: 671 SH--------------YLELVD----------GGTTSSDDG------------------- 687
+H Y EL GT + G
Sbjct: 166 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 688 ----ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 226 ELSCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQ 285
Query: 735 ITGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 286 KTGLTKRVLQVWFQNARAKFRRNL 309
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 25 LQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 84
+ ++ N +L N + AD D D + K KR+RT+F QL+ +++ F ++ N
Sbjct: 218 VDIVNYNSELSCNENE--ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHN 274
Query: 85 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
PD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 275 PDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 309
>gi|26355418|dbj|BAC41153.1| unnamed protein product [Mus musculus]
Length = 349
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTWYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTWYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|410986575|ref|XP_003999585.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Felis catus]
Length = 382
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDG-ADSESSHSKS----------------KAKRVRTTFTEEQL 711
L LV +SD G +D E S KS + KR RT T +Q
Sbjct: 150 KERELLSLVS--PAASDSGKSDDEESLCKSVHGAGKGAAEDGKDHKRPKRPRTILTTQQR 207
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 AEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 246 QRAKMKK 252
>gi|426238599|ref|XP_004013238.1| PREDICTED: LIM/homeobox protein Lhx1 [Ovis aries]
Length = 388
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 92/182 (50%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG S C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGLCVSGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 755 KK 756
++
Sbjct: 236 RR 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 37 NPDGFGADSTDHTDSESSHSKSK-------------AKR--VRTTFTEEQLQVLQANFQL 81
+PD D DSES++ K AKR RTT +QL+ L+A F
Sbjct: 142 SPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAA 201
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 202 TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|417410318|gb|JAA51634.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 391
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 107 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 166
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 167 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 226
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 227 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 272
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 197 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 256
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 257 RVVQVWFQNQRAKMKK 272
>gi|82524343|ref|NP_001032320.1| LIM/homeobox protein Lhx9 isoform 2 [Danio rerio]
gi|76667071|dbj|BAE45355.1| LIM homeodomain type transcription factor Lhx9 [Danio rerio]
Length = 395
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 54/201 (26%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C+ C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 125 YRRFSVQRCAHCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 184
Query: 671 SH--------------YLEL-------------------------------VDGGTTSS- 684
H Y EL +D G+ SS
Sbjct: 185 VHFETLIQGEYHPQLNYAELAAKAGGLALPYFNGTGTRKGRPRKRKSPAMGIDIGSYSSG 244
Query: 685 ---DDG----ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 737
+D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TG
Sbjct: 245 CNENDADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTG 304
Query: 738 LSKRVTQVWFQNSRARQKKHL 758
L+KRV QVWFQN+RA+ ++++
Sbjct: 305 LTKRVLQVWFQNARAKFRRNV 325
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 32 FQLDSNPDGFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 89
+ S G + DH D + K KR+RT+F QL+ +++ F ++ NPD +D
Sbjct: 236 IDIGSYSSGCNENDADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKD 295
Query: 90 LERIAQITGLSKRVTQVWFQNSRARQKKHL 119
L+++AQ TGL+KRV QVWFQN+RA+ ++++
Sbjct: 296 LKQLAQKTGLTKRVLQVWFQNARAKFRRNV 325
>gi|417410392|gb|JAA51670.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 398
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 107 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 166
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 167 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 226
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 227 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 272
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 197 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 256
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 257 RVVQVWFQNQRAKMKK 272
>gi|34733869|gb|AAQ81867.1| islet 2 [Ambystoma mexicanum]
Length = 361
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 88/169 (52%), Gaps = 24/169 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC++C G +SSD V +AR+ VYH+ CF C C RQL G+EF L E +LC++
Sbjct: 82 IRLFGVKCAQCGLGFSSSDLVMRARERVYHMECFRCSLCNRQLLPGDEFCLREHELLCRA 141
Query: 672 HYLEL----------------VDGG-------TTSSDDGADSESSHSKS-KAKRVRTTFT 707
+ L + GG + S + +H ++ K RVRT
Sbjct: 142 EHSHLDREAAGSPPSPTSPGPLQGGRPLHLADSVSGRQTSLRPHAHKQAEKTTRVRTVLN 201
Query: 708 EEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 202 EKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 250
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 192 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 250
>gi|224493113|sp|A2I8Z7.1|LHX9_ASTFA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|121531644|gb|ABM55505.1| LIM/homeobox protein 9 [Astyanax mexicanus]
Length = 377
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 55/202 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C +C + L+TG+ F + E+ V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTSCNKTLTTGDHFGMRENLVYCR 165
Query: 671 SH--------------YLELVDGG-------------------------------TTSSD 685
+H Y EL G T +
Sbjct: 166 AHFESLVQGEYHAPLNYAELAAKGGGLALPYFNGASAVQKGRPRKRKSPAMGIDINTYNS 225
Query: 686 DGADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++++ H K K +RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENDADHLDRDQQPYPPSQKTKXMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 737 GLSKRVTQVWFQNSRARQKKHL 758
GL+KRV QVWFQN+RA+ ++++
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNV 307
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K K +RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENDADHLDRDQQPYPPSQKTKXMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 98 GLSKRVTQVWFQNSRARQKKHL 119
GL+KRV QVWFQN+RA+ ++++
Sbjct: 286 GLTKRVLQVWFQNARAKFRRNV 307
>gi|301616967|ref|XP_002937918.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 400
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 23/165 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 170
Query: 675 ELVD-----------------------GGTTSSDDGADSESSHSKSKAKRVRTTFTEEQL 711
+ D G + G S+ + KR RT T +Q
Sbjct: 171 KEKDLLSSGSPDDSDSVKSDDEEGDVKPGKCHVNQGKGSDDGKDPRRPKRPRTILTTQQR 230
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 275
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 209 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 268
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 269 QRAKMKK 275
>gi|224058880|ref|XP_002190501.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Taeniopygia
guttata]
Length = 379
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 86/162 (53%), Gaps = 20/162 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC+ C IA S+ V +A+ VYHL CF C C+R+L G+EF L E ++LCK Y
Sbjct: 88 FAVKCAGCLEPIAPSELVMRAQKSVYHLHCFCCCVCERRLQKGDEFVLKEGQLLCKGDYE 147
Query: 674 -----LELV-----DGGTTSSDD---------GADSESSHSKSKAKRVRTTFTEEQLQVL 714
L LV D G + +D G +E + KR RT T +Q +
Sbjct: 148 KERELLSLVSPALSDSGKSDDEDSICKLGQASGKGAEDGKDHKRPKRPRTILTTQQRRAF 207
Query: 715 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 KASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 249
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 183 AEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 242
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 243 QRAKMKK 249
>gi|74096249|ref|NP_001027767.1| LIM homeodomain protein [Ciona intestinalis]
gi|3150146|emb|CAA06919.1| LIM homeodomain protein [Ciona intestinalis]
Length = 381
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS- 671
R FG KC+KC + +D+V +ARD +YH+ CF C AC RQL G+EFAL +D + CK+
Sbjct: 75 RLFGTKCNKCGLCFSKNDFVMRARDKIYHIQCFKCVACSRQLIPGDEFALRDDGLFCKAD 134
Query: 672 -----------HYLELVDG--------GTTSSDDGADSESSH------------SKSKAK 700
H ++ G G S G + SH +K
Sbjct: 135 HEVATSGDMMVHDGHMIPGIPQTPNPQGVISPQMGGERVISHRSGGHSGGQRRSKDAKTT 194
Query: 701 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 195 RVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVIRVWFQNKRCKDKK 250
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 104
S H+ + +K RVRT E+QL L+ + + PD E++ ++TGLS RV
Sbjct: 178 SGGHSGGQRRSKDAKTTRVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVI 237
Query: 105 QVWFQNSRARQKK 117
+VWFQN R + KK
Sbjct: 238 RVWFQNKRCKDKK 250
>gi|301616969|ref|XP_002937919.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 393
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 23/165 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 170
Query: 675 ELVD-----------------------GGTTSSDDGADSESSHSKSKAKRVRTTFTEEQL 711
+ D G + G S+ + KR RT T +Q
Sbjct: 171 KEKDLLSSGSPDDSDSVKSDDEEGDVKPGKCHVNQGKGSDDGKDPRRPKRPRTILTTQQR 230
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 275
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 209 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 268
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 269 QRAKMKK 275
>gi|183985542|gb|AAI66037.1| isl1 protein [Xenopus (Silurana) tropicalis]
Length = 335
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGASDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|50253600|gb|AAT72002.1| isl1, partial [Xenopus (Silurana) tropicalis]
Length = 268
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGASDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|371573882|gb|AEX38311.1| islet [Mnemiopsis leidyi]
Length = 321
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 7/148 (4%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FGAKC +C +G +S+D+V + R++++HL+CF C C RQL GEEFAL + ++C +
Sbjct: 65 FVRFGAKCHRCDQGFSSNDFVMRVRENIFHLSCFRCNMCSRQLVPGEEFALLPEGLICGT 124
Query: 672 HYLE-------LVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 724
H + L + S + + S + K RVRT + QL++L+ + + P
Sbjct: 125 HIKQQHHQQAPLPNEPLPESKPRSTNTGSSGEQKTTRVRTVLNDRQLRILRTCYNNNPRP 184
Query: 725 DGQDLERIAQITGLSKRVTQVWFQNSRA 752
D E++ ++TGLS RV +VWFQN R
Sbjct: 185 DALMKEQMTKLTGLSARVIRVWFQNKRC 212
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 54 SHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 113
S + K RVRT + QL++L+ + + PD E++ ++TGLS RV +VWFQN R
Sbjct: 153 SSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDALMKEQMTKLTGLSARVIRVWFQNKRC 212
>gi|327262855|ref|XP_003216239.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Anolis
carolinensis]
Length = 349
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGPGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|309243111|ref|NP_001020338.2| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|48375211|gb|AAT42258.1| LIM homeodomain protein Lmx1b.1 [Danio rerio]
gi|190337176|gb|AAI62952.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|190338183|gb|AAI62932.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
Length = 375
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F KCS C IA +++V +A + VYHL CF C C RQL G+EF L + ++LCKS Y
Sbjct: 88 FATKCSGCLEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKDGQLLCKSDYE 147
Query: 675 ELVDGGTTSSDDGADSESSHSKS----------------------KAKRVRTTFTEEQLQ 712
D + S D +DSE S + + KR RT T +Q +
Sbjct: 148 REKDLLGSVSPDDSDSEKSEDEELDIKPEKGSGGTGKGDDGKDPRRPKRPRTILTTQQRR 207
Query: 713 VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 251
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 39 DGFGADSTDHTDSESSHSKS----------------------KAKRVRTTFTEEQLQVLQ 76
D G+ S D +DSE S + + KR RT T +Q + +
Sbjct: 151 DLLGSVSPDDSDSEKSEDEELDIKPEKGSGGTGKGDDGKDPRRPKRPRTILTTQQRRAFK 210
Query: 77 ANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 211 ASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 251
>gi|224090443|ref|XP_002197098.1| PREDICTED: insulin gene enhancer protein ISL-1 [Taeniopygia
guttata]
Length = 349
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGGGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|70570020|dbj|BAE06522.1| transcription factor protein [Ciona intestinalis]
Length = 402
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS- 671
R FG KC+KC + +D+V +ARD +YH+ CF C AC RQL G+EFAL +D + CK+
Sbjct: 96 RLFGTKCNKCGLCFSKNDFVMRARDKIYHIQCFKCVACSRQLIPGDEFALRDDGLFCKAD 155
Query: 672 -----------HYLELVDG--------GTTSSDDGADSESSH------------SKSKAK 700
H ++ G G S G + SH +K
Sbjct: 156 HEVATSGDMMVHDGHMIPGIPQTPNPQGVISPQMGGERVISHRSGGHSGGQRRSKDAKTT 215
Query: 701 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 216 RVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVIRVWFQNKRCKDKK 271
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 104
S H+ + +K RVRT E+QL L+ + + PD E++ ++TGLS RV
Sbjct: 199 SGGHSGGQRRSKDAKTTRVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVI 258
Query: 105 QVWFQNSRARQKK 117
+VWFQN R + KK
Sbjct: 259 RVWFQNKRCKDKK 271
>gi|348539204|ref|XP_003457079.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Oreochromis niloticus]
Length = 349
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGPGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|148237976|ref|NP_001079958.1| LIM homeobox 8 [Xenopus laevis]
gi|34784686|gb|AAH57730.1| MGC68912 protein [Xenopus laevis]
Length = 282
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 9/111 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I ++DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 147 FRRYGTRCSRCGRHIHATDWVRRAKGNVYHLACFACYSCKRQLSTGEEFALVEEKVLCRV 206
Query: 672 HYLELVD-------GGTTSSDDGA--DSESSHSKSKAKRVRTTFTEEQLQV 713
HY ++D G S +GA + + AKR RT+FT +QLQV
Sbjct: 207 HYDCMLDNLKRAVENGNRVSVEGALLTEQDINQPKPAKRARTSFTADQLQV 257
>gi|62461837|gb|AAX83055.1| LIM homeodomain protein [Danio rerio]
Length = 375
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 22/164 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F KCS C IA +++V +A + VYHL CF C C RQL G+EF L + ++LCKS Y
Sbjct: 88 FATKCSGCLEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKDGQLLCKSDYE 147
Query: 675 ELVDGGTTSSDDGADSESSHSKS----------------------KAKRVRTTFTEEQLQ 712
D + S D +DSE S + + KR RT T +Q +
Sbjct: 148 REKDLLGSVSPDDSDSEKSEDEELDIKPEKGSGGTGKGDDGKDPRRPKRPRTILTTQQRR 207
Query: 713 VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 251
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 39 DGFGADSTDHTDSESSHSKS----------------------KAKRVRTTFTEEQLQVLQ 76
D G+ S D +DSE S + + KR RT T +Q + +
Sbjct: 151 DLLGSVSPDDSDSEKSEDEELDIKPEKGSGGTGKGDDGKDPRRPKRPRTILTTQQRRAFK 210
Query: 77 ANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 211 ASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 251
>gi|359070468|ref|XP_002691651.2| PREDICTED: uncharacterized protein LOC100337389 [Bos taurus]
Length = 779
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 488 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 547
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 548 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 607
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 608 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 653
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 578 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 637
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 638 RVVQVWFQNQRAKMKK 653
>gi|355749907|gb|EHH54245.1| Insulin gene enhancer protein ISL-1 [Macaca fascicularis]
Length = 349
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HY----------------------LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEE 709
+ L++ S K RVRT E+
Sbjct: 132 DHDVVERASLGAGDPLSPLHPARPLQMAGTPLPGSXXXLRPHVHKQPEKTTRVRTVLNEK 191
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|56185681|gb|AAV84105.1| apterous [Euprymna scolopes]
Length = 423
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 50/189 (26%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---- 673
+C++C GI S+D V +AR+HVYHL CF C C + L G+ F L E V C+ HY
Sbjct: 153 RCARCNMGIQSTDLVMRARNHVYHLTCFTCFTCNKALQAGDTFGLREHLVYCQVHYENSY 212
Query: 674 ---------------LELVDGGTT--------------SSDD-------GADS------- 690
+ +G T SSD+ GADS
Sbjct: 213 HAEYIALSPDMNAGQMPYYNGVGTLQKGRPRKRRSPNISSDEFAHNIGLGADSLDRAGDM 272
Query: 691 ---ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
++ + + KR+RT+F QL+ L++ F ++ NP +DL+ +AQ TGL+KRV QVWF
Sbjct: 273 IDRDTYQNAPRQKRMRTSFKHHQLRTLKSYFAVNHNPGAKDLKHLAQKTGLTKRVLQVWF 332
Query: 748 QNSRARQKK 756
QN+RA+ ++
Sbjct: 333 QNARAKFRR 341
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 40 GFGADSTDHT----DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 95
G GADS D D ++ + + KR+RT+F QL+ L++ F ++ NP +DL+ +AQ
Sbjct: 260 GLGADSLDRAGDMIDRDTYQNAPRQKRMRTSFKHHQLRTLKSYFAVNHNPGAKDLKHLAQ 319
Query: 96 ITGLSKRVTQVWFQNSRARQKK 117
TGL+KRV QVWFQN+RA+ ++
Sbjct: 320 KTGLTKRVLQVWFQNARAKFRR 341
>gi|348539206|ref|XP_003457080.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Oreochromis niloticus]
Length = 357
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 24/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + D A+ S+ + K RVRT E
Sbjct: 132 DH-DVVERASLGPGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 190
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|227430299|ref|NP_001153058.1| LIM homeobox 2a [Danio rerio]
gi|226434001|gb|ACO56117.1| LIM homeodomain protein 2a [Danio rerio]
Length = 320
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 45/190 (23%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F + +C++C GI++++ V +ARD VYHL+CF+C C + L TG+ + + E V C+
Sbjct: 67 YRRFSSQRCARCHLGISATEIVMRARDLVYHLSCFSCATCHKVLLTGDHYGMKETSVYCR 126
Query: 671 SH----------YLELVDGGTTS----------------------------------SDD 686
+H Y ++ T S SD
Sbjct: 127 AHIQRECHADLYYSDMSSRETNSESHTYDEESPVHRARVRRRKNNSTADHIAYSSDVSDL 186
Query: 687 GADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 746
G D S K+KR+RT+F QL+ +Q+ F + NPD +DL+ +AQ TGL+KRV QVW
Sbjct: 187 GVDLSERVSCQKSKRMRTSFKHHQLRTMQSFFTHNHNPDAKDLKELAQKTGLTKRVLQVW 246
Query: 747 FQNSRARQKK 756
FQN+RA+ ++
Sbjct: 247 FQNARAKFRR 256
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K+KR+RT+F QL+ +Q+ F + NPD +DL+ +AQ TGL+KRV QVWFQN+RA+ ++
Sbjct: 198 KSKRMRTSFKHHQLRTMQSFFTHNHNPDAKDLKELAQKTGLTKRVLQVWFQNARAKFRR 256
>gi|2497672|sp|Q60564.1|LMX1B_MESAU RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|1432087|gb|AAB62320.1| LIM-homeodomain protein [Mesocricetus auratus]
Length = 369
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 88/166 (53%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 78 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 137
Query: 675 ELVDGGTTSSDDGADSESSHSKS------------------------KAKRVRTTFTEEQ 710
+ D ++ S D +DS S + + KR RT T +Q
Sbjct: 138 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGGGDDGKDPRRPKRPRTILTTQQ 197
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 198 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 243
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 185 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 243
>gi|47228451|emb|CAG05271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ +D VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 216 FRRFGTKCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 275
Query: 671 SHYL-----------------------ELVD---------GGTTSSD---DGADSESSHS 695
+L +L D +TSSD + ++E +S
Sbjct: 276 EDFLSSGAIKEANLNSVSSCTDRSLSPDLQDPTQDDIKETDNSTSSDKETNNIENEEQNS 335
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 336 GTKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 395
Query: 756 K 756
+
Sbjct: 396 R 396
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T++ ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 325 TNNIENEEQNSGTKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQ 384
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 385 VWFQNRRSKERR 396
>gi|390458375|ref|XP_002743346.2| PREDICTED: LIM homeobox transcription factor 1-beta [Callithrix
jacchus]
Length = 638
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 347 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 406
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 407 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 466
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 467 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 512
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 437 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 496
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 497 RVVQVWFQNQRAKMKK 512
>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
Length = 506
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 23/151 (15%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C +GI + VR+A+D+VYHL CFAC C +QL+TG+EF L +D +++CK
Sbjct: 196 FRRFGTKCAGCEQGIPPTQVVRRAQDNVYHLECFACSMCSQQLNTGDEFYLMDDKKLVCK 255
Query: 671 SHYLELVDGGTTSSDDGADSESSHSK-----SKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y ES+ +K + KR RTT T +QL+ L+ + P
Sbjct: 256 GDY-----------------ESNKAKEFDLDNANKRPRTTITAKQLEALKRAYNESPKPA 298
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+++ TGL RV QVWFQN RA++K+
Sbjct: 299 RHVREQLSAETGLDMRVVQVWFQNRRAKEKR 329
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 273 KRPRTTITAKQLEALKRAYNESPKPARHVREQLSAETGLDMRVVQVWFQNRRAKEKR 329
>gi|18858977|ref|NP_571293.1| LIM/homeobox protein Lhx5 [Danio rerio]
gi|1708830|sp|P52889.1|LHX5_DANRE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-5
gi|840664|gb|AAA99465.1| LIM class homeodomain protein [Danio rerio]
gi|68534671|gb|AAH98523.1| LIM homeobox 5 [Danio rerio]
Length = 399
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 92/181 (50%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCLQGISPSDLVRRARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYLEL---------------------------------VDGGTTSSDDGADSESSHSKS 697
YL D T+S D ++E+ S
Sbjct: 117 EDYLSASAIKEVNLNSVSSCTDRSLSPDLPDQIQDDTKETDNSTSSDKDTNNNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 CTKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 K 756
+
Sbjct: 237 R 237
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 44 DSTDHTDSESSHSK-------------SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 90
D T TD+ +S K +K + RTT +QL+ L+A F P
Sbjct: 151 DDTKETDNSTSSDKDTNNNENEEQNSCTKRRGPRTTIKAKQLETLKAAFVATPKPTRHIR 210
Query: 91 ERIAQITGLSKRVTQVWFQNSRARQKK 117
E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 211 EQLAQETGLNMRVIQVWFQNRRSKERR 237
>gi|18858973|ref|NP_571291.1| LIM/homeobox protein Lhx1 [Danio rerio]
gi|2497670|sp|Q90476.1|LHX1_DANRE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|577525|gb|AAA92157.1| homeodomain protein [Danio rerio]
gi|190336961|gb|AAI62664.1| LIM homeobox 1a [Danio rerio]
gi|190339482|gb|AAI62396.1| LIM homeobox 1a [Danio rerio]
Length = 405
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ +D VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCAGCAQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLELVDGGTTS--------------------SDDGADSESSHSKSK------------ 698
YL +G ++ DD D+E ++ K
Sbjct: 116 DDYLSNTNGKDSNLLSVTACSDPSLSPDSQDQLQDDVKDAEIANLSDKETGNNENDDQNL 175
Query: 699 -AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 176 GGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 235
Query: 756 K 756
+
Sbjct: 236 R 236
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + +++ + K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 165 TGNNENDDQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 224
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 225 VWFQNRRSKERR 236
>gi|114626799|ref|XP_001141606.1| PREDICTED: LIM homeobox transcription factor 1-beta [Pan
troglodytes]
Length = 623
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 332 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 391
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 392 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 451
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 452 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 497
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 422 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 481
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 482 RVVQVWFQNQRAKMKK 497
>gi|149038965|gb|EDL93185.1| LIM homeobox transcription factor 1 beta [Rattus norvegicus]
Length = 372
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 88/166 (53%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 147
Query: 675 ELVDGGTTSSDDGADSESSHSKS------------------------KAKRVRTTFTEEQ 710
+ D ++ S D +DS S + + KR RT T +Q
Sbjct: 148 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQNKGSGDDGKDPRRPKRPRTILTTQQ 207
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 178 GQGSQNKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 237
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 238 RVVQVWFQNQRAKMKK 253
>gi|296482212|tpg|DAA24327.1| TPA: LIM homeobox transcription factor 1, beta-like [Bos taurus]
Length = 1019
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 728 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 787
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 788 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 847
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 848 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 893
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 818 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 877
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 878 RVVQVWFQNQRAKMKK 893
>gi|395530698|ref|XP_003767425.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Sarcophilus
harrisii]
Length = 382
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDG-ADSESSHSKS----------------KAKRVRTTFTEEQL 711
L LV +SD G +D E S K+ + KR RT T +Q
Sbjct: 150 KERELLSLVS--PVASDSGKSDDEDSLCKAGHGTGKGVAEDGKDHKRPKRPRTILTTQQR 207
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G D DH + KR RT T +Q + +A+F++ S P + E +A TGL
Sbjct: 184 GVAEDGKDH---------KRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGL 234
Query: 100 SKRVTQVWFQNSRARQKK 117
S RV QVWFQN RA+ KK
Sbjct: 235 SVRVVQVWFQNQRAKMKK 252
>gi|293345851|ref|XP_001078699.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Rattus norvegicus]
gi|293357761|ref|XP_001069713.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Rattus norvegicus]
Length = 395
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 88/166 (53%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADSESSHSKS------------------------KAKRVRTTFTEEQ 710
+ D ++ S D +DS S + + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQNKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 201 GQGSQNKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 260
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 261 RVVQVWFQNQRAKMKK 276
>gi|354507888|ref|XP_003515986.1| PREDICTED: LIM homeobox transcription factor 1-beta-like, partial
[Cricetulus griseus]
Length = 243
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 44 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 103
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 104 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 163
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 164 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 209
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 134 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 193
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 194 RVVQVWFQNQRAKMKK 209
>gi|449268581|gb|EMC79437.1| LIM/homeobox protein LMX-1.2, partial [Columba livia]
Length = 291
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 87/165 (52%), Gaps = 23/165 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 2 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 61
Query: 675 ELVD-------------------GGTTSS----DDGADSESSHSKSKAKRVRTTFTEEQL 711
+ D G + + G S+ + KR RT T +Q
Sbjct: 62 KEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVNQGKGSDDGKDPRRPKRPRTILTTQQR 121
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 122 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 166
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 100 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 159
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 160 QRAKMKK 166
>gi|45382493|ref|NP_990689.1| LIM/homeobox protein LMX-1.2 [Gallus gallus]
gi|1708855|sp|P53413.1|LMX1B_CHICK RecName: Full=LIM/homeobox protein LMX-1.2; Short=Homeobox protein
LMX-1; Short=LIM/homeobox protein 1; Short=LMX
gi|1050198|gb|AAA96240.1| LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain bp
655-831 [Gallus gallus]
Length = 377
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 88/171 (51%), Gaps = 35/171 (20%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 147
Query: 674 -------------------------LELVDGGTT---SSDDGADSESSHSKSKAKRVRTT 705
++ G T SDDG D + KR RT
Sbjct: 148 KEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPR------RPKRPRTI 201
Query: 706 FTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 202 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV Q
Sbjct: 181 TQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
Query: 106 VWFQNSRARQKK 117
VWFQN RA+ KK
Sbjct: 241 VWFQNQRAKMKK 252
>gi|426223096|ref|XP_004023228.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6-like
[Ovis aries]
Length = 370
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 12/114 (10%)
Query: 612 FRSFGAKCSKCCRG----IASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRV 667
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++V
Sbjct: 142 FSRFGTKCARCGRQSTPEIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKV 201
Query: 668 LCKSHYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQV 713
LC+ HY +++ ++++G SE AKR RT+FT EQLQV
Sbjct: 202 LCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQV 255
>gi|1145814|gb|AAA84995.1| LIM homeodomain protein [Gallus gallus]
Length = 377
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 88/171 (51%), Gaps = 35/171 (20%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 147
Query: 674 -------------------------LELVDGGTT---SSDDGADSESSHSKSKAKRVRTT 705
++ G T SDDG D + KR RT
Sbjct: 148 KEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPR------RPKRPRTI 201
Query: 706 FTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 202 LTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV Q
Sbjct: 181 TQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQ 240
Query: 106 VWFQNSRARQKK 117
VWFQN RA+ KK
Sbjct: 241 VWFQNQRAKMKK 252
>gi|143347423|gb|ABO93221.1| Islet [Platynereis dumerilii]
Length = 414
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 89/179 (49%), Gaps = 35/179 (19%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C + +D+V +AR+ +YH+ CF C AC RQL G+EFAL +D + CKS
Sbjct: 78 RLFGTKCARCTESFSKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFALRDDGLFCKSD 137
Query: 673 Y--LELVDGGTTSSDD-------------------------------GADSESSHSKS-- 697
+ LE G T + + G+ +S KS
Sbjct: 138 HEVLERAQNGATPTPENNNNNVNALNNNEKEIKTEKTGSIKSGQAEHGSRRGNSGHKSEH 197
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV VWFQN R + KK
Sbjct: 198 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTGLSPRVIGVWFQNKRCKDKK 256
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 115
S+ K RVRT E+QL L+ + + PD E++ ++TGLS RV VWFQN R +
Sbjct: 195 SEHKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTGLSPRVIGVWFQNKRCKD 254
Query: 116 KK 117
KK
Sbjct: 255 KK 256
>gi|449690910|ref|XP_004212499.1| PREDICTED: uncharacterized protein LOC100201346 [Hydra
magnipapillata]
Length = 375
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 105/226 (46%), Gaps = 11/226 (4%)
Query: 374 LSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMM 433
L+ +F+DAL LRYN L LP+YC CG + + A +CKKG V + HD +RD +
Sbjct: 140 LNKEEFKDALILRYNVPLANLPSYC-ACGEKFNELLATSCKKGAFVCNRHDNIRDLLTVC 198
Query: 434 ASYAWNGIVKEPIM---------RDSSSTSPALIADFKINGVWEAGGTAFFDNRIVNADA 484
+ + EP + +++T+ D K G W G TA FD R+ + ++
Sbjct: 199 LNNVCTDVQAEPHLIPLTNEKFNFKTANTNDEARLDIKAKGFWRKGETALFDVRVTHVNS 258
Query: 485 PSYSSQTWNTIAKRHAQEKHLKY-NTAAEDLRASFTPLVCSTDGALHLEFHSFLKRIALV 543
Q I +RH K +Y E +FTPL+ T+G E F A
Sbjct: 259 KPSKKQPTKHIFRRHEDAKKREYLKRVLEVEHGTFTPLIFGTNGGFGDECKRFTALFAQK 318
Query: 544 LSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTRQIVKPYGFDD 589
LS K + YG V++WLR R I +A L +R + + Y DD
Sbjct: 319 LSLKMGERYGAVINWLRTRFSMEITRASLFCLIASRTLFRHYNSDD 364
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 152 EEASLLFHDLHVQIVTE-KRFLGGVIGNGDEKKNYVKEKVNQWIDCVKKLSEAAKKSPQA 210
EEA L+F + + I T+ KR LG V+G+ KK Y ++ V++W + L E PQA
Sbjct: 12 EEAKLIFGN-SINITTQGKRHLGAVLGSEAYKKVYCEDLVSKWSKELNNLCEITTTQPQA 70
Query: 211 AFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVPSIF--EHEISSSEHELFHLP 268
A+S K ++ + R + ++ P+ +I+ L+P +F + I +L L
Sbjct: 71 AYSAFIKGYSSKFTYFLRTIEAFENFVTPVEKILSEKLLPVLFGTDCSIIKENRDLRALN 130
Query: 269 TRFGGLGI 276
GGLGI
Sbjct: 131 PSEGGLGI 138
>gi|148227168|ref|NP_001083902.1| LIM homeobox transcription factor 1-beta.1 [Xenopus laevis]
gi|82216057|sp|Q8UVR3.1|LMX1B_XENLA RecName: Full=LIM homeobox transcription factor 1-beta.1; AltName:
Full=LIM homeobox protein 1b; Short=Xlmx1b
gi|16974694|gb|AAL32444.1|AF414086_1 LIM homeobox protein 1b [Xenopus laevis]
Length = 400
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 23/165 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 170
Query: 675 ELVD-----------------------GGTTSSDDGADSESSHSKSKAKRVRTTFTEEQL 711
+ D G + G S+ + KR RT T +Q
Sbjct: 171 KEKDLLSSGSPDDSDSVKSDDEEGDVKPGKGRVNQGKGSDDGKDPRRPKRPRTILTTQQR 230
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 RAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKIKK 275
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 209 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 268
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 269 QRAKIKK 275
>gi|410915338|ref|XP_003971144.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 397
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 90/179 (50%), Gaps = 34/179 (18%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC C +GI SD VR+A+ V+HL CF C C +QLSTGEE + L E + +CK
Sbjct: 56 FRRFGTKCDGCAQGILPSDLVRRAKSKVFHLNCFTCMMCNKQLSTGEELYVLDEFKFVCK 115
Query: 671 SHY----------LELVDGGTTS--------SDDGADSESSH---------------SKS 697
Y L + S DDG DSE+ H +
Sbjct: 116 EDYHNSSGKDTILLSVTSCSDPSMSPDSQDPQDDGKDSETGHLSDKDACGNENDEQGAVG 175
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K + RTT +QL+ L+A F P E+++Q TGL+ RV QVWFQN R+++++
Sbjct: 176 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSQETGLNMRVIQVWFQNRRSKERR 234
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K + RTT +QL+ L+A F P E+++Q TGL+ RV QVWFQN R+++++
Sbjct: 176 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSQETGLNMRVIQVWFQNRRSKERR 234
>gi|391342699|ref|XP_003745653.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 405
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 36/181 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
++ FG KC+ C +GI+ +D VR+AR V+HL CF C C++QLSTGEE + L E+R +CK
Sbjct: 58 YKRFGTKCAGCGQGISPTDLVRRARSKVFHLKCFTCLVCRKQLSTGEELYVLDENRFICK 117
Query: 671 SHY---------------------------------LELVDGGTTSSDDG-ADSESSHSK 696
Y L+ D G + + G A++ S
Sbjct: 118 EDYLNQRQQEKNSLNIISRCNDAGLPPNIEDPALPGLKRPDSGGSGPESGQANAPDDGSG 177
Query: 697 SKAKR-VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
+ +R RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 178 GQKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 237
Query: 756 K 756
+
Sbjct: 238 R 238
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 38 PD--GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 95
PD G G +S + K + RTT +QL+ L+A F P E++AQ
Sbjct: 157 PDSGGSGPESGQANAPDDGSGGQKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQ 216
Query: 96 ITGLSKRVTQVWFQNSRARQKK 117
TGL+ RV QVWFQN R+++++
Sbjct: 217 ETGLNMRVIQVWFQNRRSKERR 238
>gi|383792181|ref|NP_001244317.1| LIM homeobox transcription factor 1-alpha [Gallus gallus]
Length = 380
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 87/164 (53%), Gaps = 24/164 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC+ C IA S+ V +A+ VYHL CF C C+R+L G+EF L E ++LCK Y
Sbjct: 90 FAVKCAGCLESIAPSELVMRAQQSVYHLHCFCCCVCERRLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELV-----DGGTTSSDD-----------GADSESSHSKSKAKRVRTTFTEEQLQ 712
L LV D G + +D GA+ H + KR RT T +Q +
Sbjct: 150 KERELLSLVSPALSDSGKSDDEDSVCKMGPASAKGAEEGKDH--KRPKRPRTILTTQQRR 207
Query: 713 VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 251
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 185 AEEGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 244
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 245 QRAKMKK 251
>gi|326924822|ref|XP_003208624.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha-like [Meleagris gallopavo]
Length = 367
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 87/164 (53%), Gaps = 24/164 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC+ C IA S+ V +A+ VYHL CF C C+R+L G+EF L E ++LCK Y
Sbjct: 77 FAVKCAGCLESIAPSELVMRAQQSVYHLHCFCCCVCERRLQKGDEFVLKEGQLLCKGDYE 136
Query: 674 -----LELV-----DGGTTSSDD-----------GADSESSHSKSKAKRVRTTFTEEQLQ 712
L LV D G + +D GA+ H + KR RT T +Q +
Sbjct: 137 KERELLSLVSPALSDSGKSDDEDSVCKMGPASAKGAEEGKDH--KRPKRPRTILTTQQRR 194
Query: 713 VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 195 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 238
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 172 AEEGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 231
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 232 QRAKMKK 238
>gi|410930167|ref|XP_003978470.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 408
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 38/183 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC C +GI+ +D VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCGGCFQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLELVDGG-------TTSSDDG-----------------------ADSESSHSKS--- 697
YL +G TT SD +D E+ ++++
Sbjct: 116 EDYLSNSNGKDTNLLSVTTCSDPSLSPDSQDQLQDDVVLKDTEIAALSDKETVNNENDDQ 175
Query: 698 ----KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++
Sbjct: 176 NLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 235
Query: 754 QKK 756
+++
Sbjct: 236 ERR 238
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + +++ + K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 167 TVNNENDDQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 226
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 227 VWFQNRRSKERR 238
>gi|160420135|ref|NP_001104188.1| ISL LIM homeobox 1 [Xenopus laevis]
gi|115528275|gb|AAI24895.1| LOC100126604 protein [Xenopus laevis]
gi|144952770|gb|ABP04039.1| islet-1 [Xenopus laevis]
gi|213626865|gb|AAI70282.1| Islet-1 [Xenopus laevis]
Length = 354
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 131
Query: 672 HY----------------------LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEE 709
+ L++ + K RVRT E+
Sbjct: 132 DHDVVERASLGGSDPLSPLHPGRPLQMAAEPICARQPALRPHVHKQPEKTTRVRTVLNEK 191
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 192 QLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
>gi|148707230|gb|EDL39177.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 352
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 21/160 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+A+F++ S P + E +A TGLS RV QVWFQN RA+
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAK 249
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 SEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRAR 114
RA+
Sbjct: 246 QRAK 249
>gi|431916082|gb|ELK16336.1| LIM homeobox transcription factor 1-alpha [Pteropus alecto]
Length = 374
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 85/163 (52%), Gaps = 21/163 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL CF C C+RQL G+EF L + ++LC+ Y
Sbjct: 82 FAVKCGGCFEAIAPNEFVMRAQKTVYHLGCFCCCVCERQLQKGDEFVLKDGQLLCRGDYE 141
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 142 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGAAEDGKDHKRPKRPRTILTTQQRRA 201
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 202 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 244
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+E + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 178 AEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 237
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 238 QRAKMKK 244
>gi|397492168|ref|XP_003817000.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan paniscus]
Length = 390
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 72 FRRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 131
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ G + + T +QL+ L++ + P E
Sbjct: 132 ADY-------ETAKQRG---QPRGRRPXXXXXXXXITAKQLETLKSAYNTSPKPARHVRE 181
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 182 QLSSETGLDMRVVQVWFQNRRAKEKR 207
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 67 FTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 126
T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K ++K
Sbjct: 157 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEK------RLKK 210
Query: 127 SQNRPKYGYY 136
R ++G Y
Sbjct: 211 DAGRQRWGQY 220
>gi|47219374|emb|CAG01537.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 90/179 (50%), Gaps = 34/179 (18%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC C +GI SD VR+A+ V+HL CF C C +QLSTGEE + L E + +CK
Sbjct: 49 FRRFGTKCDGCAQGILPSDLVRRAKSKVFHLNCFTCMICNKQLSTGEELYILDEFKFVCK 108
Query: 671 SHY----------LELVDGGTTS--------SDDGADSESSH---------------SKS 697
Y L + S DDG DSE+ H +
Sbjct: 109 EDYHNCNGKDTILLSVTSCSDPSMSPDSQDPQDDGKDSETGHLSDKDACGNENDEQGAVG 168
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K + RTT +QL+ L+A F P E+++Q TGL+ RV QVWFQN R+++++
Sbjct: 169 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSQETGLNMRVIQVWFQNRRSKERR 227
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K + RTT +QL+ L+A F P E+++Q TGL+ RV QVWFQN R+++++
Sbjct: 169 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSQETGLNMRVIQVWFQNRRSKERR 227
>gi|397492166|ref|XP_003816999.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan paniscus]
Length = 401
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 83 FRRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 142
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ G + + T +QL+ L++ + P E
Sbjct: 143 ADY-------ETAKQRG---QPRGRRPXXXXXXXXITAKQLETLKSAYNTSPKPARHVRE 192
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 193 QLSSETGLDMRVVQVWFQNRRAKEKR 218
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 67 FTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 126
T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K ++K
Sbjct: 168 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEK------RLKK 221
Query: 127 SQNRPKYGYY 136
R ++G Y
Sbjct: 222 DAGRQRWGQY 231
>gi|397492170|ref|XP_003817001.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Pan paniscus]
Length = 377
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 59 FRRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 118
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y T+ G + + T +QL+ L++ + P E
Sbjct: 119 ADY-------ETAKQRG---QPRGRRPXXXXXXXXITAKQLETLKSAYNTSPKPARHVRE 168
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 169 QLSSETGLDMRVVQVWFQNRRAKEKR 194
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 67 FTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 126
T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K ++K
Sbjct: 144 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEK------RLKK 197
Query: 127 SQNRPKYGYY 136
R ++G Y
Sbjct: 198 DAGRQRWGQY 207
>gi|449268911|gb|EMC79740.1| LIM homeobox transcription factor 1-alpha [Columba livia]
Length = 343
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 16/158 (10%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C + IA S+ + + ++VYH+ CF C C+R+L G+EF L E ++LC+S Y
Sbjct: 60 FQTKCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSDYE 119
Query: 674 -----LELVDGGTTSSDDGADSESSHSKSK----------AKRVRTTFTEEQLQVLQANF 718
L + T S D + HS K +KR RT T +Q + +A+F
Sbjct: 120 KEKEMLSAISPAPTESVKSEDEDGGHSHGKGGEETKDHKRSKRPRTILTTQQRRAFKASF 179
Query: 719 QLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
++ S P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 180 EVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 217
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 52 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 111
E + ++KR RT T +Q + +A+F++ S P + E +A TGL+ RV QVWFQN
Sbjct: 152 EETKDHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQ 211
Query: 112 RARQKK 117
RA+ KK
Sbjct: 212 RAKMKK 217
>gi|68448499|ref|NP_001020339.1| LIM homeobox transcription factor 1, beta a [Danio rerio]
gi|62461839|gb|AAX83056.1| LIM homeodomain protein [Danio rerio]
gi|190337362|gb|AAI63321.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
gi|190339774|gb|AAI63333.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
Length = 373
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 87/162 (53%), Gaps = 20/162 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C I+ ++ V +A + VYHL+CF C C+R+L G+EF L E ++LCK+ Y
Sbjct: 86 FATKCSGCLEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKEGQLLCKTDYE 145
Query: 674 -------LELVDGGTTSSDD------------GADSESSHSKSKAKRVRTTFTEEQLQVL 714
+L D + +D G S+ S + KR RT T +Q +
Sbjct: 146 REKDLASPDLSDSDKSEDEDLDVKPEKGAGGQGKGSDDSKDPRRPKRPRTILTTQQRRAF 205
Query: 715 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 206 KASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 247
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ S + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 181 SDDSKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 240
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 241 QRAKMKK 247
>gi|348525932|ref|XP_003450475.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 399
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 89/179 (49%), Gaps = 34/179 (18%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI SD VR+A+ V+HL CF C C +QLSTGEE + L E + +CK
Sbjct: 56 FRKFGTKCAGCAQGILPSDLVRRAKSKVFHLNCFTCVMCNKQLSTGEELYILDEFKFVCK 115
Query: 671 SHY------------------LELVDGGTTSSDDGADSESSH---------------SKS 697
Y L DDG DSE+ H +
Sbjct: 116 EDYENNSGKDTILLSVTTCSDPSLSPDSQDPQDDGKDSENGHLSDKDTCSNENDEQSAVG 175
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K + RTT +QL+ L+A F P E++++ TGL+ RV QVWFQN R+++++
Sbjct: 176 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLNMRVIQVWFQNRRSKERR 234
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
++ D +S+ K + R TT +QL+ L+A F P E++++ TGL+ RV Q
Sbjct: 165 SNENDEQSAVGKRRGPR--TTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLNMRVIQ 222
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 223 VWFQNRRSKERR 234
>gi|432899669|ref|XP_004076609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oryzias latipes]
Length = 402
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 88/179 (49%), Gaps = 34/179 (18%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC C +GI SD VR+A+ V+HL CF C C +QLSTGEE + L E + +CK
Sbjct: 56 FRRFGTKCGGCSQGILPSDLVRRAKSKVFHLNCFTCVMCNKQLSTGEELYILDEFKFVCK 115
Query: 671 SHY------------------LELVDGGTTSSDDGADSESSH---------------SKS 697
Y L DDG DSES H +
Sbjct: 116 EDYQNSNGKDTILLSVTTCSEPSLSPDSQDPQDDGKDSESGHLSDKDACGNDNDEQSAVG 175
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K + RTT +QL+ L+A F P E++++ TGL+ RV QVWFQN R+++++
Sbjct: 176 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLNMRVIQVWFQNRRSKERR 234
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
D++ + K + RTT +QL+ L+A F P E++++ TGL+ RV QVWFQ
Sbjct: 167 DNDEQSAVGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLNMRVIQVWFQ 226
Query: 110 NSRARQKK 117
N R+++++
Sbjct: 227 NRRSKERR 234
>gi|327277087|ref|XP_003223297.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Anolis
carolinensis]
Length = 381
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 16/158 (10%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C + +A S+++ + ++VYH+ CF+C C+R+L G+EF L E ++LC+S Y
Sbjct: 96 FQTKCSGCLKAVAPSEFIMRVLENVYHVHCFSCCECERRLQRGDEFVLKEGQLLCRSDYE 155
Query: 674 -----LELVDGGTTSSDDGADSESSHSKSK----------AKRVRTTFTEEQLQVLQANF 718
L + T S D + +H K +KR RT T +Q + +A+F
Sbjct: 156 KEREMLSAISPAPTESVKSEDEDGNHPHGKTGEEGKDHKRSKRPRTILTTQQRRAFKASF 215
Query: 719 QLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
++ S P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 216 EVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 253
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 52 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 111
E ++KR RT T +Q + +A+F++ S P + E +A TGL+ RV QVWFQN
Sbjct: 188 EEGKDHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQ 247
Query: 112 RARQKK 117
RA+ KK
Sbjct: 248 RAKMKK 253
>gi|390345308|ref|XP_790548.3| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Strongylocentrotus purpuratus]
Length = 387
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KC+ C + I SS+ V +A +VYHL CF C C +QL G+EF L E+R+ CK Y
Sbjct: 88 FGTKCNACFQSIPSSELVMRALSNVYHLRCFTCVTCDQQLKKGDEFVLKENRLYCKEDYT 147
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
+ + + + S S + KR RT T Q + +A+F++ S P + E +A+
Sbjct: 148 K--EHTVDTQKVSSKSSSQDGRKGPKRPRTILTTSQRRAFKASFEVSSKPCRKVRETLAK 205
Query: 735 ITGLSKRVTQVWFQNSRARQKK 756
TGLS RV QVWFQN RA+ KK
Sbjct: 206 ETGLSVRVVQVWFQNQRAKMKK 227
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A+F++ S P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 171 KRPRTILTTSQRRAFKASFEVSSKPCRKVRETLAKETGLSVRVVQVWFQNQRAKMKK 227
>gi|348504222|ref|XP_003439661.1| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Oreochromis niloticus]
Length = 456
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 84/164 (51%), Gaps = 22/164 (13%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F +CS C IA +++V +A D VYHL+CF C C+ QL G+EF L E ++LCK+ Y
Sbjct: 87 FAVECSNCLGKIAPTEFVMRALDSVYHLSCFCCCVCQHQLCKGDEFVLKEGQLLCKTDYE 146
Query: 674 -----LELVDGGTTSSDDGAD----------------SESSHSKSKAKRVRTTFTEEQLQ 712
+ T SD D S+ S + KR RT T Q +
Sbjct: 147 RERTLFNTLSPDITDSDKSEDEDSDVKSEKILLVRKCSDDSKEPLRPKRPRTILTTPQQR 206
Query: 713 VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 207 AFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 250
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ S + KR RT T Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 184 SDDSKEPLRPKRPRTILTTPQQRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 243
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 244 QRAKMKK 250
>gi|48375213|gb|AAT42259.1| LIM homeodomain protein Lmx1b.2 [Danio rerio]
Length = 375
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 87/162 (53%), Gaps = 20/162 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C I+ ++ V +A + VYHL+CF C C+R+L G+EF L E ++LCK+ Y
Sbjct: 88 FATKCSGCLEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKEGQLLCKTDYE 147
Query: 674 -------LELVDGGTTSSDD------------GADSESSHSKSKAKRVRTTFTEEQLQVL 714
+L D + +D G S+ S + KR RT T +Q +
Sbjct: 148 REKDLASPDLSDSDKSEDEDLDVKPEKGAGGQGKGSDDSKDPRRPKRPRTILTTQQRRAF 207
Query: 715 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 208 KASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 249
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ S + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 183 SDDSKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 242
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 243 QRAKMKK 249
>gi|37789883|gb|AAP04274.1| ScLim1 [Scyliorhinus canicula]
Length = 237
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 94/180 (52%), Gaps = 36/180 (20%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKS 671
R FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 1 RRFGTKCAGCYQGISPSDLVRRARSKVFHLNCFTCMICNKQLSTGEELYIIDENKFVCKD 60
Query: 672 HYL---ELVDGGTTS-----------------SDDGADSESSHSKSK------------- 698
+L + G S DD DSES++ K
Sbjct: 61 DFLNSNNSRENGALSVTACSDQSLSPDSQDHLQDDTKDSESANISDKETASNENEEQNLG 120
Query: 699 AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 121 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 180
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 35 DSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 94
DS T ++E + +K + RTT +QL+ L+A F P E++A
Sbjct: 98 DSESANISDKETASNENEEQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 157
Query: 95 QITGLSKRVTQVWFQNSRARQKK 117
Q TGL+ RV QVWFQN R+++++
Sbjct: 158 QETGLNMRVIQVWFQNRRSKERR 180
>gi|327291350|ref|XP_003230384.1| PREDICTED: LIM homeobox transcription factor 1-beta-like, partial
[Anolis carolinensis]
Length = 185
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 85/167 (50%), Gaps = 27/167 (16%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 2 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 61
Query: 675 ELVD-------------------------GGTTSSDDGADSESSHSKSKAKRVRTTFTEE 709
+ D G T+ G D + KR RT T +
Sbjct: 62 KEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQTNPGKGGD--DGKDPRRPKRPRTILTTQ 119
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 120 QRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 166
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 36 SNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 95
+NP G D D + KR RT T +Q + +A+F++ S P + E +A
Sbjct: 94 TNPGKGGDDGKDP---------RRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAA 144
Query: 96 ITGLSKRVTQVWFQNSRARQKK 117
TGLS RV QVWFQN RA+ KK
Sbjct: 145 ETGLSVRVVQVWFQNQRAKMKK 166
>gi|371573886|gb|AEX38313.1| Lhx3 [Mnemiopsis leidyi]
Length = 507
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
++ +G KC+KC + I S VR+A HV+H+ CF C C R L+TG+EF +D +++C+
Sbjct: 178 YKRYGTKCAKCEKVIPPSQVVRRAGGHVFHMDCFVCIICSRTLNTGDEFYFVDDNQLVCR 237
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
S Y +D+ E KR RTT T +QL+ L+ ++ P E
Sbjct: 238 SDYDNFKTQYANCTDETFTDELDLENQGIKRPRTTITAKQLETLKTAYENSPKPARHVRE 297
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 298 QLSSETGLDMRVVQVWFQNRRAKEKR 323
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 43 ADSTDHTDSESSHSKSKA-KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
A+ TD T ++ +++ KR RTT T +QL+ L+ ++ P E+++ TGL
Sbjct: 248 ANCTDETFTDELDLENQGIKRPRTTITAKQLETLKTAYENSPKPARHVREQLSSETGLDM 307
Query: 102 RVTQVWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
RV QVWFQN RA++K +MK R ++G Y
Sbjct: 308 RVVQVWFQNRRAKEK------RMKKEAPRNRWGQY 336
>gi|443701940|gb|ELU00130.1| hypothetical protein CAPTEDRAFT_97456 [Capitella teleta]
Length = 269
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 39/184 (21%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
F+ F +C C R ++ SD VR+A D VYHL CF C C+RQL TGEE F L R +CK
Sbjct: 57 FKRFATQCGVCKRDLSPSDLVRRALDRVYHLQCFTCLVCRRQLDTGEEYFVLDTTRFMCK 116
Query: 671 SHYLEL-----------------VDGGT-------TSSDDGADSESSHSK---------- 696
Y+E+ GT S DD A ++ S ++
Sbjct: 117 KDYMEIEGKCGKPSGRAPGSCPACGPGTRPPGAPQDSEDDDATTQVSSAEQDAPESNGGD 176
Query: 697 ----SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 752
SK R RT ++QL+VL A F + P ++ E + + TGLS RV QVWFQN R+
Sbjct: 177 GTPGSKKSRPRTVIKDDQLKVLHAAFTANHLPTKKEREDLVERTGLSMRVIQVWFQNKRS 236
Query: 753 RQKK 756
+++K
Sbjct: 237 KERK 240
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 38 PDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
P+ G D T SK R RT ++QL+VL A F + P ++ E + + T
Sbjct: 170 PESNGGDGT---------PGSKKSRPRTVIKDDQLKVLHAAFTANHLPTKKEREDLVERT 220
Query: 98 GLSKRVTQVWFQNSRARQKK 117
GLS RV QVWFQN R++++K
Sbjct: 221 GLSMRVIQVWFQNKRSKERK 240
>gi|313234650|emb|CBY10605.1| unnamed protein product [Oikopleura dioica]
Length = 289
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
++ +G KC+ C GI S+ +RKA DH YHL CF C C R+ TG+ F L ED R++CK
Sbjct: 93 YKRYGNKCASCNEGIEPSEVIRKAGDHSYHLECFHCAVCDRRFETGDHFFLLEDKRLVCK 152
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y + A KR RTT T +QL VL+ +Q S P E
Sbjct: 153 EDY------------EDAKMREGQDDGNIKRPRTTITAKQLDVLKQAYQQSSKPARHVRE 200
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++ TGL RV QVWFQN RA++K+
Sbjct: 201 SLSTETGLDMRVVQVWFQNRRAKEKR 226
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL VL+ +Q S P E ++ TGL RV QVWFQN RA++K+
Sbjct: 170 KRPRTTITAKQLDVLKQAYQQSSKPARHVRESLSTETGLDMRVVQVWFQNRRAKEKR 226
>gi|306526228|sp|Q25132.2|LHX3_HALRO RecName: Full=LIM/homeobox protein Lhx3; Short=Hr-Lhx3; Short=LIM
homeobox protein 3; AltName: Full=LIM/homeobox protein
LIM; Short=HrLIM
Length = 692
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 17/157 (10%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEF 660
R +++ C F+ FG KC+ C GI ++ +R+A+D+VYHL F C C ++ TG++F
Sbjct: 323 RGNLVFCKDDFFKRFGTKCTACGHGIPPTEVIRRAQDNVYHLEGFCCFLCHEKMGTGDQF 382
Query: 661 ALHED-RVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQ 719
L ED R++CK Y + A S + ++ KR RTT T +QL+ L++ +
Sbjct: 383 YLLEDNRLVCKKDYEQ------------AKSRDADIENGVKRPRTTITAKQLETLKSAYN 430
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P E+++ TGL RV QVWFQN RA++K+
Sbjct: 431 QSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 467
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
KR RTT T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K
Sbjct: 410 VKRPRTTITAKQLETLKSAYNQSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEK--- 466
Query: 120 HTGKMKSSQNRPKYGYY 136
++K R ++G++
Sbjct: 467 ---RIKRDTGRQRWGHF 480
>gi|332230039|ref|XP_003264194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Nomascus leucogenys]
Length = 408
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 89/172 (51%), Gaps = 30/172 (17%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------------ESSHSKS---------KAKRVRT 704
+ D ++ S D +DS S SK + KR RT
Sbjct: 171 KEKDLLSSVSPDESDSGEAWPELGAGLRDGERRPARGAGSQSKGSGDDGKDPRRPKRPRT 230
Query: 705 TFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 ILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 282
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
GA S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 207 GAGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 266
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 267 RVVQVWFQNQRAKMKK 282
>gi|332230043|ref|XP_003264196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Nomascus leucogenys]
Length = 416
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 89/172 (51%), Gaps = 30/172 (17%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------------ESSHSKS---------KAKRVRT 704
+ D ++ S D +DS S SK + KR RT
Sbjct: 171 KEKDLLSSVSPDESDSGEAWPELGAGLRDGERRPARGAGSQSKGSGDDGKDPRRPKRPRT 230
Query: 705 TFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 ILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 282
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
GA S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 207 GAGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 266
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 267 RVVQVWFQNQRAKMKK 282
>gi|440808056|gb|AGC24171.1| Lhx3/4, partial [Lymnaea stagnalis]
Length = 127
Score = 108 bits (269), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/138 (42%), Positives = 81/138 (58%), Gaps = 13/138 (9%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCKSHY 673
FG KC+ C +GI ++ VR+A+++VYHL CFAC C RQL+TG+EF L EDR ++CK+ Y
Sbjct: 2 FGTKCASCDKGIPPTEVVRRAQENVYHLDCFACLMCARQLNTGDEFYLMEDRKLVCKTDY 61
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+ A + S KR RTT T +QL+ L+ + + P E+++
Sbjct: 62 ------------EAAKAREYEMDSSNKRPRTTITAKQLEALKRAYNESNKPARHVREQLS 109
Query: 734 QITGLSKRVTQVWFQNSR 751
TGL RV QVWFQN R
Sbjct: 110 AETGLDMRVVQVWFQNRR 127
Score = 48.5 bits (114), Expect = 0.015, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 49 TDSESSHSK-----SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRV 103
TD E++ ++ S KR RTT T +QL+ L+ + + P E+++ TGL RV
Sbjct: 59 TDYEAAKAREYEMDSSNKRPRTTITAKQLEALKRAYNESNKPARHVREQLSAETGLDMRV 118
Query: 104 TQVWFQNSR 112
QVWFQN R
Sbjct: 119 VQVWFQNRR 127
>gi|332230041|ref|XP_003264195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Nomascus leucogenys]
Length = 401
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 89/172 (51%), Gaps = 30/172 (17%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------------ESSHSKS---------KAKRVRT 704
+ D ++ S D +DS S SK + KR RT
Sbjct: 171 KEKDLLSSVSPDESDSGEAWPELGAGLRDGERRPARGAGSQSKGSGDDGKDPRRPKRPRT 230
Query: 705 TFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 ILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 282
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
GA S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 207 GAGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 266
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 267 RVVQVWFQNQRAKMKK 282
>gi|149058121|gb|EDM09278.1| LIM homeobox transcription factor 1 alpha (predicted) [Rattus
norvegicus]
Length = 263
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 87/165 (52%), Gaps = 21/165 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVDGGTTSSDDGADSE----SSHSKSKA-----------KRVRTTFTEEQLQV 713
L LV + S D E S+H K KR RT T +Q +
Sbjct: 150 KERELLSLVSPAASDSGKSDDEESLCKSAHGAGKGASEDGKDHKRPKRPRTILTTQQRRA 209
Query: 714 LQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+A+F++ S P + E +A TGLS RV QVWFQN RA+ ++ +
Sbjct: 210 FKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKLRQMV 254
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
SE + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 186 SEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 245
Query: 111 SRARQKKHL 119
RA+ ++ +
Sbjct: 246 QRAKLRQMV 254
>gi|126306172|ref|XP_001363612.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Monodelphis
domestica]
Length = 382
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 86/169 (50%), Gaps = 33/169 (19%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE 149
Query: 674 -----LELVD---------------------GGTTSSDDGADSESSHSKSKAKRVRTTFT 707
L LV G ++DG D + + KR RT T
Sbjct: 150 KERELLSLVSPVASDSGKSDDDDSLCKAGHGAGKGVAEDGKDHK------RPKRPRTILT 203
Query: 708 EEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 204 TQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G D DH + KR RT T +Q + +A+F++ S P + E +A TGL
Sbjct: 184 GVAEDGKDH---------KRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGL 234
Query: 100 SKRVTQVWFQNSRARQKK 117
S RV QVWFQN RA+ KK
Sbjct: 235 SVRVVQVWFQNQRAKMKK 252
>gi|236201759|dbj|BAH58772.1| LIM homeodomain protein Hr-Lhx3 b-form [Halocynthia roretzi]
Length = 611
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 17/157 (10%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEF 660
R +++ C F+ FG KC+ C GI ++ +R+A+D+VYHL F C C ++ TG++F
Sbjct: 242 RGNLVFCKDDFFKRFGTKCTACGHGIPPTEVIRRAQDNVYHLEGFCCFLCHEKMGTGDQF 301
Query: 661 ALHED-RVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQ 719
L ED R++CK Y + A S + ++ KR RTT T +QL+ L++ +
Sbjct: 302 YLLEDNRLVCKKDYEQ------------AKSRDADIENGVKRPRTTITAKQLETLKSAYN 349
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P E+++ TGL RV QVWFQN RA++K+
Sbjct: 350 QSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 386
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
KR RTT T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K
Sbjct: 329 VKRPRTTITAKQLETLKSAYNQSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEK--- 385
Query: 120 HTGKMKSSQNRPKYGYY 136
++K R ++G++
Sbjct: 386 ---RIKRDTGRQRWGHF 399
>gi|426247330|ref|XP_004017439.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Ovis
aries]
Length = 386
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---ELVDGGTTS-----------------SDDGADSESSHSKSKAKRVRTTFTEEQ 710
YL L +G S DD ++++S S K + E+
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDK-ETANNENEEQN 175
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 176 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 221
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 44 DSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRV 103
D TD+ +S K A + L+ L+A F P E++AQ TGL+ RV
Sbjct: 151 DDPKETDNSTSSDKETANNENEE---QNLETLKAAFAATPKPTRHIREQLAQETGLNMRV 207
Query: 104 TQVWFQNSRARQKK 117
QVWFQN R+++++
Sbjct: 208 IQVWFQNRRSKERR 221
>gi|167859587|gb|ACA04748.1| Lim3 [Amphimedon queenslandica]
Length = 338
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 85/145 (58%), Gaps = 16/145 (11%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCKS 671
+ FG +C+ C + I + VR+A+++VYHL CFAC C+RQLSTG+EF L +DR ++CK+
Sbjct: 146 KRFGTRCAGCQQPIPPTQVVRRAQENVYHLQCFACFICQRQLSTGDEFYLMDDRKLVCKA 205
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y ++ + + KR RTT +++QL +L+ + + P +
Sbjct: 206 DY---------------EAAKARADGSQKRPRTTISQKQLDLLKTAYCVSPKPSRHVRQE 250
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
++ TGL RV QVWFQN RA+ K+
Sbjct: 251 LSDKTGLDMRVVQVWFQNKRAKDKR 275
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT +++QL +L+ + + P + ++ TGL RV QVWFQN RA+ K+
Sbjct: 219 KRPRTTISQKQLDLLKTAYCVSPKPSRHVRQELSDKTGLDMRVVQVWFQNKRAKDKR 275
>gi|281349042|gb|EFB24626.1| hypothetical protein PANDA_015045 [Ailuropoda melanoleuca]
Length = 329
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +
Sbjct: 64 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLRERARRTRRP 123
Query: 673 YLE------------LVDGGTTSSDDGADSESS-----HSKS-KAKRVRTTFTEEQLQVL 714
L G +D G+ + S H ++ K RVRT E+QL L
Sbjct: 124 RRRWRGTGRAGGGPVLTSGPPVLADPGSGRQPSLRPHVHKQTEKTTRVRTVLNEKQLHTL 183
Query: 715 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 184 RTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 225
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 167 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 225
>gi|340376253|ref|XP_003386648.1| PREDICTED: LIM/homeobox protein Lhx3-like [Amphimedon
queenslandica]
Length = 338
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 85/145 (58%), Gaps = 16/145 (11%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCKS 671
+ FG +C+ C + I + VR+A+++VYHL CFAC C+RQLSTG+EF L +DR ++CK+
Sbjct: 146 KRFGTRCAGCQQPIPPTQVVRRAQENVYHLQCFACFICQRQLSTGDEFYLMDDRKLVCKA 205
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y ++ + + KR RTT +++QL +L+ + + P +
Sbjct: 206 DY---------------EAAKARADGSQKRPRTTISQKQLDLLKTAYCVSPKPSRHVRQE 250
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
++ TGL RV QVWFQN RA+ K+
Sbjct: 251 LSDKTGLDMRVVQVWFQNKRAKDKR 275
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT +++QL +L+ + + P + ++ TGL RV QVWFQN RA+ K+
Sbjct: 219 KRPRTTISQKQLDLLKTAYCVSPKPSRHVRQELSDKTGLDMRVVQVWFQNKRAKDKR 275
>gi|340717324|ref|XP_003397134.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
terrestris]
gi|350407611|ref|XP_003488142.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
impatiens]
Length = 458
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 88/192 (45%), Gaps = 49/192 (25%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC KC + D+V +AR +YH+ CF C AC RQL G+EFAL +D + C+ H
Sbjct: 109 RLFGTKCDKCSECFSKDDYVMRARSKIYHIKCFRCSACMRQLVPGDEFALRQDGLFCR-H 167
Query: 673 YLELVDGGTTSSDDG-----------------------------ADSESSHSKS------ 697
++++GG S G + SES K+
Sbjct: 168 DHDVLEGGKLCSGPGGVPGSENNNNASLMNNNHHLHPNDGSISDSGSESGSHKAGVGGTR 227
Query: 698 -------------KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
K RVRT E+QL L+ + + PD E++ ++TGLS RV +
Sbjct: 228 GSGGHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 287
Query: 745 VWFQNSRARQKK 756
VWFQN R + KK
Sbjct: 288 VWFQNKRCKDKK 299
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 241 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 299
>gi|348532229|ref|XP_003453609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 407
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 91/183 (49%), Gaps = 38/183 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC C +GI+ +D VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCGGCSQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL---------------------------ELVDG--------GTTSSDDGADSESSHS 695
YL +L D T S + ++E+
Sbjct: 116 DDYLNNTSVKDTNLLSVTACSDPSLSPDSQDQLQDDVVLKDTEIATLSDKETVNNENDDQ 175
Query: 696 KSKAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
KR RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++
Sbjct: 176 NLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 235
Query: 754 QKK 756
+++
Sbjct: 236 ERR 238
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + +++ + K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 167 TVNNENDDQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 226
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 227 VWFQNRRSKERR 238
>gi|56694836|gb|AAW23080.1| Lim3 [Oikopleura dioica]
Length = 289
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
++ +G KC+ C GI S+ ++KA DH YHL CF C C R+ TG+ F L ED R++CK
Sbjct: 93 YKRYGNKCASCNEGIEPSEVIQKAGDHSYHLECFHCAVCDRRFETGDHFFLLEDKRLVCK 152
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y + A KR RTT T +QL VL+ +Q S P E
Sbjct: 153 EDY------------EDAKMREGQDDGNIKRPRTTITAKQLDVLKQAYQQSSKPARHVRE 200
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++ TGL RV QVWFQN RA++K+
Sbjct: 201 SLSTETGLDMRVVQVWFQNRRAKEKR 226
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL VL+ +Q S P E ++ TGL RV QVWFQN RA++K+
Sbjct: 170 KRPRTTITAKQLDVLKQAYQQSSKPARHVRESLSTETGLDMRVVQVWFQNRRAKEKR 226
>gi|259013450|ref|NP_001158468.1| ISL LIM homeobox 1 [Saccoglossus kowalevskii]
gi|197320557|gb|ACH68440.1| islet homeobox protein [Saccoglossus kowalevskii]
Length = 383
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 26/177 (14%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS- 671
R FG KC+KC G + +D+V +AR+ ++H+ CF C AC RQL G+EFAL +D + CK+
Sbjct: 72 RLFGTKCAKCNLGFSKNDFVMRARNKIFHIDCFRCVACSRQLIPGDEFALRDDGLFCKAD 131
Query: 672 --------------------HYLELVDGGTTSSDDGADSESSH-----SKSKAKRVRTTF 706
H + +++ + S H + K RVRT
Sbjct: 132 HDVVERASGEVNGNNNNNNNHRTYMASHAEPMNNNRSGSLRPHVHKQETHHKTTRVRTVL 191
Query: 707 TEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKM 763
E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK K+
Sbjct: 192 NEKQLHTLRTCYNANPRPDALMKEQLTEMTNLSPRVIRVWFQNKRCKDKKRSQAMKL 248
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 48 HTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 107
H + +H K+ RVRT E+QL L+ + + PD E++ ++T LS RV +VW
Sbjct: 174 HVHKQETHHKTT--RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTNLSPRVIRVW 231
Query: 108 FQNSRARQKKHLHTGKM 124
FQN R + KK K+
Sbjct: 232 FQNKRCKDKKRSQAMKL 248
>gi|118343872|ref|NP_001071755.1| LIM/homeobox protein Lhx3a type 1 [Ciona intestinalis]
gi|70570105|dbj|BAE06537.1| transcription factor protein [Ciona intestinalis]
Length = 596
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 84/157 (53%), Gaps = 17/157 (10%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEF 660
R S + C F+ FG KCS C I + VR+A+D+VYHL CF C C QL TG++F
Sbjct: 236 RGSYVYCKEDFFKRFGTKCSGCELAIPPTQVVRRAQDNVYHLECFRCFMCSEQLGTGDQF 295
Query: 661 ALHED-RVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQ 719
L +D R++CK Y + A S + KR RTT T +QL+ L+ +
Sbjct: 296 YLLDDSRLVCKKDY------------EHAKSRDLDMDNGIKRPRTTITAKQLETLKIAYN 343
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P E+++ TGL RV QVWFQN RA++K+
Sbjct: 344 QSPKPARHVREQLSSDTGLDMRVVQVWFQNRRAKEKR 380
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 324 KRPRTTITAKQLETLKIAYNQSPKPARHVREQLSSDTGLDMRVVQVWFQNRRAKEKR 380
>gi|47212495|emb|CAG12709.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 84/168 (50%), Gaps = 27/168 (16%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F KCS C IA +++V +A + VYHL CF C C RQL G+EF L E ++LCK
Sbjct: 1 RLFATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKEGQLLCKFD 60
Query: 673 Y------------------------LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTE 708
Y L++ G DS+ S + KR RT T
Sbjct: 61 YEREKDLLSSVSPDDSDSEKSDDEELDIKQEKGIGQGKGDDSKDSR---RPKRPRTILTT 117
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 118 QQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 165
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G D DS+ S + KR RT T +Q + +A+F++ S P + E +A TGL
Sbjct: 93 GIGQGKGD--DSKDSR---RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGL 147
Query: 100 SKRVTQVWFQNSRARQKK 117
S RV QVWFQN RA+ KK
Sbjct: 148 SVRVVQVWFQNQRAKMKK 165
>gi|50344739|ref|NP_001002043.1| islet1, like [Danio rerio]
gi|37682137|gb|AAQ97995.1| ISL1 transcription factor, LIM/homeodomain [Danio rerio]
Length = 323
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
+KC+KC + S ++V +++ ++YH+ CF CE C R L +G+E+ L + ++LC H+ +L
Sbjct: 79 SKCAKCDKAFISKEFVMRSQVNIYHVQCFRCEGCNRPLLSGDEYVLQDGQLLCTDHHNKL 138
Query: 677 VDGGTTSSDDGAD-----------SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
+ + D S +A RVRT +E QL +LQ + + PD
Sbjct: 139 MSASINQQKEAGDPSEEIKSTLSWSSMQRRSERATRVRTVLSETQLCMLQTCYTANPRPD 198
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E++ ++TGLS RV +VWFQN R + KK
Sbjct: 199 ALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 229
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+A RVRT +E QL +LQ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 171 RATRVRTVLSETQLCMLQTCYTANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 229
>gi|47224946|emb|CAG06516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 94/183 (51%), Gaps = 38/183 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC C +GI+ +D VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCGGCFQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLELVD-------GGTTSSDDG-----------------------ADSESSHSKS--- 697
YL + TT SD +D E+ ++++
Sbjct: 116 EDYLSNSNVKDTNLLSVTTCSDPSLSPDSQDQLQDDVVLKDTEIAALSDKETVNNENDDQ 175
Query: 698 ----KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R++
Sbjct: 176 NLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSK 235
Query: 754 QKK 756
+++
Sbjct: 236 ERR 238
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + +++ + K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 167 TVNNENDDQNLGGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 226
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 227 VWFQNRRSKERR 238
>gi|351707222|gb|EHB10141.1| LIM homeobox transcription factor 1-beta [Heterocephalus glaber]
Length = 395
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 24/163 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT T +Q
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDTKPTKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQ 230
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +A+F++ S P + E A TGLS RV QVWFQN RA+
Sbjct: 231 RRAFKASFEVSSKPCRKVRETRAAETGLSVRVVQVWFQNQRAK 273
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 114
+ KR RT T +Q + +A+F++ S P + E A TGLS RV QVWFQN RA+
Sbjct: 218 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETRAAETGLSVRVVQVWFQNQRAK 273
>gi|332023208|gb|EGI63464.1| Insulin gene enhancer protein ISL-1 [Acromyrmex echinatior]
Length = 432
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 91/193 (47%), Gaps = 51/193 (26%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK-- 670
R FG KC KC R + +D+V +A+ +YH+ CF C AC R+L TG+EFAL +D + C+
Sbjct: 85 RLFGTKCDKCSRCFSKNDYVMRAKTKIYHVECFRCCACSRRLETGDEFALRQDGLFCRLD 144
Query: 671 ------------------------------SHYLELVDGGTTSSDDGADSESSHS----- 695
+H+L DG + SD G++S S +
Sbjct: 145 HDVLEGGKHCTGGVGIPGSENNNNASLTNNNHHLHPNDG--SMSDSGSESGSHKAGVGGV 202
Query: 696 ------------KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
K RVRT E+QL L+ + + PD E++ ++TGLS RV
Sbjct: 203 RGSGGHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 262
Query: 744 QVWFQNSRARQKK 756
+VWFQN R + KK
Sbjct: 263 RVWFQNKRCKDKK 275
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 217 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 275
>gi|380018327|ref|XP_003693083.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis florea]
Length = 419
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 88/192 (45%), Gaps = 49/192 (25%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC KC + D+V +AR +YH+ CF C AC RQL G+EFAL +D + C+ H
Sbjct: 70 RLFGTKCDKCSECFSKDDYVMRARSKIYHIKCFRCSACMRQLVPGDEFALRQDGLFCR-H 128
Query: 673 YLELVDGGTTSSDDG-----------------------------ADSESSHSKS------ 697
++++GG S G + SES K+
Sbjct: 129 DHDVLEGGKLCSGPGGVPGSENNNNASLMNNNHHLHPNDGSISDSGSESGSHKAGMGGTR 188
Query: 698 -------------KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
K RVRT E+QL L+ + + PD E++ ++TGLS RV +
Sbjct: 189 GSGSHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 248
Query: 745 VWFQNSRARQKK 756
VWFQN R + KK
Sbjct: 249 VWFQNKRCKDKK 260
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 202 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 260
>gi|328793255|ref|XP_003251852.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis
mellifera]
Length = 418
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 88/192 (45%), Gaps = 49/192 (25%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC KC + D+V +AR +YH+ CF C AC RQL G+EFAL +D + C+ H
Sbjct: 69 RLFGTKCDKCSECFSKDDYVMRARSKIYHIKCFRCSACMRQLVPGDEFALRQDGLFCR-H 127
Query: 673 YLELVDGGTTSSDDG-----------------------------ADSESSHSKS------ 697
++++GG S G + SES K+
Sbjct: 128 DHDVLEGGKLCSGPGGVPGSENNNNASLMNNNHHLHPNDGSISDSGSESGSHKAGMGGTR 187
Query: 698 -------------KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
K RVRT E+QL L+ + + PD E++ ++TGLS RV +
Sbjct: 188 GSGSHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 247
Query: 745 VWFQNSRARQKK 756
VWFQN R + KK
Sbjct: 248 VWFQNKRCKDKK 259
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 201 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 259
>gi|259013283|ref|NP_001158443.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
gi|197320559|gb|ACH68441.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
Length = 402
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 58/215 (26%)
Query: 612 FRSFGAK-CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFA--------- 661
+R F K C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F
Sbjct: 113 YRRFSVKRCARCHLGISASEMVMRARDLVYHLSCFTCATCNKALATGDHFGMKDAMVYCR 172
Query: 662 ------LHEDRVLCKSHY-----------------------------------LELVDGG 680
LH + V+ S Y L +
Sbjct: 173 SHYEAMLHTEHVMGLSPYHHQPSPMPGASPTQHTPYYNGVGAVQKGRPRKRKSPNLENDY 232
Query: 681 TTSSDDGADSES-------SHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
T DSE+ +++ + KR+RT+F QL+ +++ F L+ NPD +DL+++A
Sbjct: 233 HTQGYPHNDSENHQDLNSDQYTQQRTKRMRTSFKHHQLRTMKSYFALNHNPDAKDLKQLA 292
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQN 768
Q TGL+KRV VWFQN+RA+ ++ L GK N
Sbjct: 293 QKTGLTKRVLHVWFQNARAKYRRSLSKGKDGDGNN 327
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 31 NFQLDSNPDGFG-ADSTDHTDSESS-HSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQ 88
N + D + G+ DS +H D S +++ + KR+RT+F QL+ +++ F L+ NPD +
Sbjct: 227 NLENDYHTQGYPHNDSENHQDLNSDQYTQQRTKRMRTSFKHHQLRTMKSYFALNHNPDAK 286
Query: 89 DLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQN 129
DL+++AQ TGL+KRV VWFQN+RA+ ++ L GK N
Sbjct: 287 DLKQLAQKTGLTKRVLHVWFQNARAKYRRSLSKGKDGDGNN 327
>gi|410922082|ref|XP_003974512.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Takifugu
rubripes]
Length = 375
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 84/166 (50%), Gaps = 27/166 (16%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C IA +++V +A + VYHL CF C C RQL G+EF L E ++LCK Y
Sbjct: 88 FATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKEGQLLCKFDYE 147
Query: 674 -----------------------LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQ 710
L++ S G DS+ S + KR RT T +Q
Sbjct: 148 REKDLLSSVSPDDSDSEKSDDEELDIKQEKGISQGKGDDSKDSR---RPKRPRTILTTQQ 204
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 205 RRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 250
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 52 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 111
+ S + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 185 DDSKDSRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQ 244
Query: 112 RARQKK 117
RA+ KK
Sbjct: 245 RAKMKK 250
>gi|171544941|ref|NP_001116387.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
gi|157410515|gb|ABV53980.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
Length = 401
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 85/145 (58%), Gaps = 17/145 (11%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCKS 671
R FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK+
Sbjct: 84 RRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCKT 143
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y T+ AD S AKR RTT T +QL+ L+ + P E+
Sbjct: 144 DY-------ETAKQREAD-------STAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 189
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
++ TGL RV QV QN RA++K+
Sbjct: 190 LSSETGLDMRVVQV--QNRRAKEKR 212
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
TD+ ++ + S AKR RTT T +QL+ L+ + P E+++ TGL RV Q
Sbjct: 143 TDYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQ 202
Query: 106 VWFQNSRARQKKHLHTGKMKSSQNRPKYGYY 136
V QN RA++K ++K R ++G Y
Sbjct: 203 V--QNRRAKEK------RLKKDAGRQRWGQY 225
>gi|241811703|ref|XP_002416452.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215510916|gb|EEC20369.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 155
Score = 105 bits (262), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
FG KC+ C IA S+ V +A +HV+H+ACFAC C R L G++F + R+ C+ +
Sbjct: 2 FGVKCAGCLGSIAPSELVMRALEHVFHVACFACVVCGRTLQKGDQFVVRSGRLYCRPDFE 61
Query: 674 --LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
+ LV G + +G + + KR RT T Q + +A+F++ P + E
Sbjct: 62 KEMALVPG---AGQNGQPAVRPDGRRGPKRPRTILTTAQRRAFKASFEISQKPCRKVRET 118
Query: 732 IAQITGLSKRVTQVWFQNSRARQKKHLHTGK 762
+A+ TGLS R+ QVWFQN RA+ + L K
Sbjct: 119 LAKETGLSVRIVQVWFQNQRAKVRAPLEREK 149
Score = 52.4 bits (124), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
KR RT T Q + +A+F++ P + E +A+ TGLS R+ QVWFQN RA+ + L
Sbjct: 87 KRPRTILTTAQRRAFKASFEISQKPCRKVRETLAKETGLSVRIVQVWFQNQRAKVRAPLE 146
Query: 121 TGK 123
K
Sbjct: 147 REK 149
>gi|196011854|ref|XP_002115790.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
gi|190581566|gb|EDV21642.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
Length = 292
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 35/180 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCK 670
+R++G KCS C GI ++ VR+ARD VYH+ C C C RQ+STGE+ +++ ++ +C+
Sbjct: 56 YRTYGTKCSGCGIGIPPNELVRRARDDVYHIKCLKCAICGRQMSTGEQLYINQHNQYICQ 115
Query: 671 SHYLELVDGGTTS------SDDGADSESSH----------------------------SK 696
+ Y + TS +DD D S + +
Sbjct: 116 ADYQNSISSTNTSLNDQSLTDDKEDDNSDYDEKEDETEDLLDNNNEDDLQADNDNESGNN 175
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K + RTT EQL++L+ F + P ER+AQ TGL+ RV QVWFQN R+++++
Sbjct: 176 CKKRGPRTTIKTEQLEMLKNAFAITPKPTRLIRERLAQQTGLNMRVIQVWFQNRRSKERR 235
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 35 DSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 94
++N D AD+ D+ES ++ K + RTT EQL++L+ F + P ER+A
Sbjct: 158 NNNEDDLQADN----DNESGNN-CKKRGPRTTIKTEQLEMLKNAFAITPKPTRLIRERLA 212
Query: 95 QITGLSKRVTQVWFQNSRARQKK 117
Q TGL+ RV QVWFQN R+++++
Sbjct: 213 QQTGLNMRVIQVWFQNRRSKERR 235
>gi|229619776|dbj|BAH58087.1| LIM homeobox protein 1 [Nematostella vectensis]
Length = 358
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 15/162 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
+R +G KCS C +GI+ +D VR+A+ V+H+ CF C CKRQ++TG+E + + + +C+
Sbjct: 57 YRRYGTKCSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFICR 116
Query: 671 SHYLELVDGGTTSSDDGADSESSHS-----------KSKAKRVRTTFTEEQLQVLQANFQ 719
Y T+ DD D S SK + RTT +QL+ L++ F
Sbjct: 117 DDYYH---SHPTNLDDAIDEPKDLSYGLDEDLDAALASKRRGPRTTIKAKQLEALKSTFA 173
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTG 761
P E++AQ TGL+ RV QVWFQN R+++++ +G
Sbjct: 174 ATPKPSRNIREKLAQETGLNMRVIQVWFQNRRSKERRLKQSG 215
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
SK + RTT +QL+ L++ F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 151 SKRRGPRTTIKAKQLEALKSTFAATPKPSRNIREKLAQETGLNMRVIQVWFQNRRSKERR 210
Query: 118 HLHTG 122
+G
Sbjct: 211 LKQSG 215
>gi|15706308|dbj|BAB68342.1| Cs-LHX3 [Ciona savignyi]
Length = 472
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 85/157 (54%), Gaps = 17/157 (10%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEF 660
R S + C F+ +G KC+ C I ++ VR+A+++VYHL CF C C QL TG++F
Sbjct: 119 RGSFVYCKEDFFKRYGTKCAGCDEAIPPTEVVRRAQENVYHLECFRCFMCNDQLGTGDQF 178
Query: 661 ALHED-RVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQ 719
L +D R++CK Y E D+G KR RTT T +QL+ L+ +
Sbjct: 179 YLLDDNRLVCKKDY-ETAKSRDIDMDNG-----------IKRPRTTITAKQLETLKLAYN 226
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P E+++ TGL RV QVWFQN RA++K+
Sbjct: 227 QSPKPARHVREQLSSDTGLDMRVVQVWFQNRRAKEKR 263
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RTT T +QL+ L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 207 KRPRTTITAKQLETLKLAYNQSPKPARHVREQLSSDTGLDMRVVQVWFQNRRAKEKR 263
>gi|432874756|ref|XP_004072577.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 398
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 81/170 (47%), Gaps = 34/170 (20%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F KCS C IA +++V +A + VYHL CF C C RQL G+EF L E ++LCK Y
Sbjct: 111 FATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKEGQLLCKVDYE 170
Query: 675 ELVD----------------------------GGTTSSDDGADSESSHSKSKAKRVRTTF 706
D G DDG D + KR RT
Sbjct: 171 REKDLLSSVSPDDSDSEKSDDEELDIKPEKGIGSQGKGDDGKDPR------RPKRPRTIL 224
Query: 707 TEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 225 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 274
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 216 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 274
>gi|395735796|ref|XP_003776642.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-1
[Pongo abelii]
Length = 382
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 34/178 (19%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 75 IRLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRA 134
Query: 672 HYLELVDGGTTSSDD----------------------GADSESSHSKS----------KA 699
+ ++V+ + + D A+ S+ + K
Sbjct: 135 DH-DVVERASLGAGDPLSPLHPCRXLQPSASRRSLFPAAEPISARQPALRPHVHKQPEKT 193
Query: 700 KRVRTTFTEEQLQVLQANFQLDS-NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 194 TRVRTVLNEKQLHTLRTCYASKTRGPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 251
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDS-NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 192 KTTRVRTVLNEKQLHTLRTCYASKTRGPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 251
>gi|348516128|ref|XP_003445591.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Oreochromis niloticus]
Length = 399
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 81/170 (47%), Gaps = 34/170 (20%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F KCS C IA +++V +A + VYHL CF C C RQL G+EF L E ++LCK Y
Sbjct: 111 FATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKEGQLLCKIDYE 170
Query: 675 ELVD----------------------------GGTTSSDDGADSESSHSKSKAKRVRTTF 706
D G DDG D + KR RT
Sbjct: 171 REKDLLSSVSPDDSDSEKSDDEELDIKPEKGIGSQGKGDDGKDPR------RPKRPRTIL 224
Query: 707 TEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 225 TTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 274
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 216 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 274
>gi|391340116|ref|XP_003744391.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Metaseiulus
occidentalis]
Length = 460
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 81/172 (47%), Gaps = 28/172 (16%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FGAKCSKC + SD+V +AR ++H+ CF C AC RQL G+EFA+ ED + CK+
Sbjct: 160 RLFGAKCSKCGLSFSRSDFVMRARGKIFHIDCFRCIACSRQLIPGDEFAIREDELFCKAD 219
Query: 673 YLELVDGGTTSSD----------------------------DGADSESSHSKSKAKRVRT 704
+ L G + K RVRT
Sbjct: 220 HDVLGPRGNGLPSLGGNGAGGGGGGPGGGGGGGSAGGGSVRSQGHKGGRGGEHKPTRVRT 279
Query: 705 TFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 280 VLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 331
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 273 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 331
>gi|383858654|ref|XP_003704814.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Megachile
rotundata]
Length = 416
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 88/192 (45%), Gaps = 49/192 (25%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC KC + D+V +A+ +YH+ CF C AC RQL G+EFAL +D + C+ H
Sbjct: 67 RLFGTKCDKCSECFSKDDYVMRAKSKIYHIKCFRCSACMRQLVPGDEFALRQDGLFCR-H 125
Query: 673 YLELVDGGTTSSDDG-----------------------------ADSESSHSKS------ 697
++++GG S G + SES K+
Sbjct: 126 DHDVLEGGKLCSGPGGVPGSENNNNASLMNNNHHLHPNDGSISDSGSESGSHKAGVGGTR 185
Query: 698 -------------KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
K RVRT E+QL L+ + + PD E++ ++TGLS RV +
Sbjct: 186 GSGGHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 245
Query: 745 VWFQNSRARQKK 756
VWFQN R + KK
Sbjct: 246 VWFQNKRCKDKK 257
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 199 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 257
>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
vitripennis]
Length = 458
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 87/191 (45%), Gaps = 47/191 (24%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK-- 670
R FG KC KC + +D+V +A+ +YHL CF C AC RQL G+EFAL D + C+
Sbjct: 103 RLFGTKCDKCRQSFNKNDFVMRAKTKIYHLECFRCSACMRQLVPGDEFALRSDGLFCRHD 162
Query: 671 --------------------------------SHYLELVDG---------GTTSSDDGAD 689
+H+L DG G+ + GA
Sbjct: 163 HDALEGEKICGGGVPAGIPGNENNNNANLTNNNHHLHPNDGSLSDSGSESGSHKTVGGAR 222
Query: 690 SESSH----SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 745
+ H S K RVRT E+QL L+ + + PD E++ ++TGLS RV +V
Sbjct: 223 GAAGHKGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRV 282
Query: 746 WFQNSRARQKK 756
WFQN R + KK
Sbjct: 283 WFQNKRCKDKK 293
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 115
S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R +
Sbjct: 232 SDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKD 291
Query: 116 KK 117
KK
Sbjct: 292 KK 293
>gi|340385282|ref|XP_003391139.1| PREDICTED: hypothetical protein LOC100640854, partial [Amphimedon
queenslandica]
Length = 914
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 6/166 (3%)
Query: 90 LERIAQITGLSKRVTQVWFQN--SRARQKKHLHTGKMKSSQNRPKYGYYPEPNKSFLVIK 147
+++++ +GL TQ+W+ + S L + K + P +GY+PEP KS L++
Sbjct: 549 IQKLSNTSGL----TQLWYADDSSALGNLSVLRSWLDKLIEIGPLFGYFPEPKKSSLIVH 604
Query: 148 PQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGDEKKNYVKEKVNQWIDCVKKLSEAAKKS 207
++A +F D ++ +VT RFLGG+IG+ ++ +V K QW V+ L+ A
Sbjct: 605 EHLTDQARHIFRDSNIAVVTSCRFLGGIIGDSSSQERFVSMKTEQWESYVRMLTLVASDH 664
Query: 208 PQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVPSIF 253
PQ A+ +TKSLQ EW +LQRV +C + + + + S +P++
Sbjct: 665 PQEAYIALTKSLQNEWLYLQRVTPNCGHLFQSVEDSLSSVFIPALI 710
>gi|194390004|dbj|BAG60518.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 96/184 (52%), Gaps = 27/184 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL-------ELVDGGTTSSDDGADSESSHSKSK-------------AKR--VRTTFTE 708
YL E S DD DSES++ K AKR RTT
Sbjct: 116 EDYLSNSSVAKENSLHSDPSQDDAKDSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKA 175
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN-SRARQKKHL---HTGKMK 764
+QL+ L+A F P E++AQ TGL+ RV QV + S + + H H G+ +
Sbjct: 176 KQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVRPRRASPSHRGPHCHFGHPGRAR 235
Query: 765 SSQN 768
+QN
Sbjct: 236 RAQN 239
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 34 LDSNP---DGFGADSTDHTDSESSHSK-------SKAKRVRTTFTEEQLQVLQANFQLDS 83
L S+P D ++S + +D E+ ++ +K + RTT +QL+ L+A F
Sbjct: 130 LHSDPSQDDAKDSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATP 189
Query: 84 NPDGQDLERIAQITGLSKRVTQVWFQN-SRARQKKHL---HTGKMKSSQN 129
P E++AQ TGL+ RV QV + S + + H H G+ + +QN
Sbjct: 190 KPTRHIREQLAQETGLNMRVIQVRPRRASPSHRGPHCHFGHPGRARRAQN 239
>gi|397638190|gb|EJK72962.1| hypothetical protein THAOC_05454, partial [Thalassiosira oceanica]
Length = 411
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 392 KGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMASYAWNGIV--------- 442
K LP CDGCG +V HAL CK GGLV HD RDE +AS A
Sbjct: 6 KNLPKTCDGCGATFTVEHALTCKNGGLVVMRHDDCRDEFGDIASKATTPSRVTTEPLIHH 65
Query: 443 --KEPIMRDSSSTSPALIADFKINGVWEAGG--------TAFFDNRIVNADAPSYSSQTW 492
EP+MR ++ S + E G T D I + DAP Y Q
Sbjct: 66 GGNEPVMRQANGASNTSNNNNSSTRGGEERGDLAIQRSKTTILDFVITDTDAPLYGHQPS 125
Query: 493 NTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMY 552
+ ++ A+ K KY A + R F P+ S G E + KR+A +L+ KW + Y
Sbjct: 126 KKVLEKAAKRKKDKYLEACRERRRDFIPMAYSVGGLAGKEARAAEKRLASLLASKWDRPY 185
Query: 553 GHVLSWLRVRTEFSILKAVSLRLRGTR 579
+ +++ R SI++++S+ LRG+R
Sbjct: 186 SEMTCFVKTRMSLSIVQSISMLLRGSR 212
>gi|307184076|gb|EFN70611.1| Insulin gene enhancer protein ISL-1 [Camponotus floridanus]
Length = 408
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 51/193 (26%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK-- 670
R FG KC KC + + +D+V +A+ +YH+ CF C AC R+L TG+EFAL +D + C+
Sbjct: 61 RLFGTKCDKCSQCFSKNDYVMRAKTKIYHVECFRCCACMRRLETGDEFALRQDGLFCRHD 120
Query: 671 ------------------------------SHYLELVDGGTTSSDDGADSESSHS----- 695
+H+L DG + SD G++S S +
Sbjct: 121 HDVLEGGKHCTGAAGIPGSENNNNASLTNNNHHLHPNDG--SMSDSGSESGSHKAGVGGV 178
Query: 696 ------------KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
K RVRT E+QL L+ + + PD E++ ++TGLS RV
Sbjct: 179 RGSGGHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVI 238
Query: 744 QVWFQNSRARQKK 756
+VWFQN R + KK
Sbjct: 239 RVWFQNKRCKDKK 251
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 193 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 251
>gi|170578520|ref|XP_001894442.1| homeobox domain containing protein [Brugia malayi]
gi|158598966|gb|EDP36714.1| homeobox domain containing protein [Brugia malayi]
Length = 248
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 35/178 (19%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHY 673
+G +C +C + D V +A D ++HL CF C C L E F + + L C +H+
Sbjct: 27 YGKRCERCAIILCDEDIVMRANDAIFHLECFTCYVCSIPLQPSELFIMGCNGTLYCNAHF 86
Query: 674 -------------------LELVDG---------------GTTSSDDGADSESSHSKSKA 699
+ L+ G TT S D + E+ K+
Sbjct: 87 GAINPTNDDNSLRTTASSEISLIGGKERCRKWRKSTDDIESTTDSIDCVEEEALSITHKS 146
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
KR+RT+F QL+ +++ F L+ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 147 KRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQVWFQNARAKFRRN 204
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
DS D + E+ K+KR+RT+F QL+ +++ F L+ NPD +DL+++AQ TGL+KR
Sbjct: 129 TDSIDCVEEEALSITHKSKRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKR 188
Query: 103 VTQVWFQNSRARQKKHLHTGKMKSSQNRPKYGYYP 137
V QVWFQN+RA+ +++ + ++S N P P
Sbjct: 189 VLQVWFQNARAKFRRNSIQCR-ETSSNSPHVPSLP 222
>gi|260794981|ref|XP_002592485.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277705|gb|EEN48496.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 452
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 59/206 (28%)
Query: 612 FRSFGAK-CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLS--------------- 655
+R F K C++C GI++S+ V +ARD V+HL CF CE C R L+
Sbjct: 114 YRRFSVKRCARCHLGISASEMVMRARDLVFHLNCFMCETCNRPLTTGDQYGMRGDTVYCR 173
Query: 656 -----------------------------TGEEF-----ALHEDRVLCK-----SHYLEL 676
TG +F A+H+ R + + Y++
Sbjct: 174 YDYETLVHGEASHLPLGAACSPPQTPTSPTGAQFYNGVGAIHKGRPRKRKSPEPNGYMQG 233
Query: 677 -VDGGTTSSDDG---ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
D T+S +DG + H + KR+RT+F QL+ +++ F L+ NPD +DL+++
Sbjct: 234 DNDSDTSSHNDGYQQGGNSPGHQPQRQKRMRTSFKHHQLRAMKSYFALNHNPDAKDLKQL 293
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHL 758
AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 294 AQKTGLTKRVLQVWFQNARAKYRRNL 319
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 11/93 (11%)
Query: 38 PDGF-----GADSTDHTD------SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 86
P+G+ +D++ H D + H + KR+RT+F QL+ +++ F L+ NPD
Sbjct: 227 PNGYMQGDNDSDTSSHNDGYQQGGNSPGHQPQRQKRMRTSFKHHQLRAMKSYFALNHNPD 286
Query: 87 GQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
+DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 287 AKDLKQLAQKTGLTKRVLQVWFQNARAKYRRNL 319
>gi|307209962|gb|EFN86739.1| Insulin gene enhancer protein ISL-1 [Harpegnathos saltator]
Length = 407
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 49/192 (25%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC KC + + +D+V +A+ +YH+ CF C AC R+L TG+EFAL +D + C+ H
Sbjct: 61 RLFGTKCDKCSQCFSKNDYVMRAKTKIYHVECFRCCACMRRLETGDEFALRQDGLFCR-H 119
Query: 673 YLELVDGGT-------------------------------TSSDDGADSESSHSKS---- 697
++++GG + SD G++S S +
Sbjct: 120 DHDVLEGGKHCTGATGIPGSENNNNASLTNNNHHLHPNDGSMSDSGSESGSHKAGVGGVR 179
Query: 698 -------------KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
K RVRT E+QL L+ + + PD E++ ++TGLS RV +
Sbjct: 180 GSGSHKSGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 239
Query: 745 VWFQNSRARQKK 756
VWFQN R + KK
Sbjct: 240 VWFQNKRCKDKK 251
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 193 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 251
>gi|270002859|gb|EEZ99306.1| LIM homeobox transcription factor 1, beta [Tribolium castaneum]
Length = 388
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KCS+C + + V +A+ HV+HL CF C C + L GE+F L ++ C+
Sbjct: 97 RIFGVKCSRCGDRLLPHEMVMRAQQHVFHLPCFVCVVCCQPLQKGEQFVLRAGQLFCRQD 156
Query: 673 Y---LELVDGGTTSSDDGADSESSHSKSK--AKRVRTTFTEEQLQVLQANFQLDSNPDGQ 727
+ + L+ ++ DD D S + KR RT T Q + +A+F++ P +
Sbjct: 157 FEKEMYLMQQASSGDDDMLDENSRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRK 216
Query: 728 DLERIAQITGLSKRVTQVWFQNSRARQKK 756
E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 217 VREALAKETGLSVRVVQVWFQNQRAKMKK 245
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G D +S + KR RT T Q + +A+F++ P + E +A+ TGLS
Sbjct: 170 GDDDMLDENSRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKETGLSV 229
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 230 RVVQVWFQNQRAKMKK 245
>gi|441636332|ref|XP_003259172.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4 [Nomascus
leucogenys]
Length = 415
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 30/145 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF +
Sbjct: 126 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYXXD------- 178
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
S++ AKR RTT T +QL+ L+ ++ P E+
Sbjct: 179 -----------------------SEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQ 215
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
++ TGL RV QVWFQN RA++K+
Sbjct: 216 LSSETGLDMRVVQVWFQNRRAKEKR 240
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 115
S++ AKR RTT T +QL+ L+ ++ P E+++ TGL RV QVWFQN RA++
Sbjct: 179 SEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKE 238
Query: 116 KKHLHTGKMKSSQNRPKYGYY 136
K ++K R ++G +
Sbjct: 239 K------RLKKDAGRHRWGQF 253
>gi|91077954|ref|XP_967240.1| PREDICTED: similar to CG32105 CG32105-PB [Tribolium castaneum]
Length = 472
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KCS+C + + V +A+ HV+HL CF C C + L GE+F L ++ C+
Sbjct: 181 RIFGVKCSRCGDRLLPHEMVMRAQQHVFHLPCFVCVVCCQPLQKGEQFVLRAGQLFCRQD 240
Query: 673 Y---LELVDGGTTSSDDGAD--SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQ 727
+ + L+ ++ DD D S + KR RT T Q + +A+F++ P +
Sbjct: 241 FEKEMYLMQQASSGDDDMLDENSRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRK 300
Query: 728 DLERIAQITGLSKRVTQVWFQNSRARQKK 756
E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 301 VREALAKETGLSVRVVQVWFQNQRAKMKK 329
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G D +S + KR RT T Q + +A+F++ P + E +A+ TGLS
Sbjct: 254 GDDDMLDENSRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKETGLSV 313
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 314 RVVQVWFQNQRAKMKK 329
>gi|156379960|ref|XP_001631723.1| predicted protein [Nematostella vectensis]
gi|156218768|gb|EDO39660.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 15/157 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
+R +G KCS C +GI+ +D VR+A+ V+H+ CF C CKRQ++TG+E + + + +C+
Sbjct: 57 YRRYGTKCSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFICR 116
Query: 671 SHYLELVDGGTTSSDDGADSESSHS-----------KSKAKRVRTTFTEEQLQVLQANFQ 719
Y T+ DD D S SK + RTT +QL+ L++ F
Sbjct: 117 DDYYH---SHPTNLDDAIDEPKDLSYGLDEDLDAALASKRRGPRTTIKAKQLEALKSTFA 173
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 174 ATPKPSRNIREKLAQETGLNMRVIQVWFQNRRSKERR 210
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
SK + RTT +QL+ L++ F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 151 SKRRGPRTTIKAKQLEALKSTFAATPKPSRNIREKLAQETGLNMRVIQVWFQNRRSKERR 210
>gi|47220025|emb|CAG12173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 318
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 606 LSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED 665
+S+ R F KCS C + I S+ + + + VYHL CF C C+R+L G+EF L E
Sbjct: 5 ISIFCAHRLFVRKCSSCLQVIGRSELIMRVQGQVYHLGCFTCCECERRLQRGDEFVLKEG 64
Query: 666 RVLCKSHY---LELVDGGTTSSDDGADSESSHSKS---------------KAKRVRTTFT 707
++LC+ Y E++ + + + SE ++KR RT T
Sbjct: 65 QLLCRMDYEKEREMLAAISPTPTESVKSEDEDGGVGSGGGKGVDDGKEHKRSKRPRTILT 124
Query: 708 EEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+Q + +A+F++ + P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 125 TQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 173
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
++KR RT T +Q + +A+F++ + P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 115 RSKRPRTILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 173
>gi|443690540|gb|ELT92649.1| hypothetical protein CAPTEDRAFT_219057 [Capitella teleta]
Length = 432
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 58/201 (28%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C + + +D+V +A++ +YH+ CF C AC RQL G+EFAL +D + CK+
Sbjct: 73 RLFGTKCARCSQSFSKNDFVMRAKNKIYHIDCFRCIACSRQLIPGDEFALRDDGLFCKAD 132
Query: 673 YLELVDGGTTSS-------DDG--------------------ADSESS------------ 693
+ ++V+ +T S DD +D SS
Sbjct: 133 H-DVVESASTGSITPSPAQDDAKMNILNNNNNNNKDLKLHDVSDDSSSGKLSGGGGGGGG 191
Query: 694 ------------------HSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
+ ++K R+RT E+QL L+ + + PD E++ ++
Sbjct: 192 GGGVGGGGGGGGRARGSRNKETKTTRIRTVLNEKQLHTLRTCYSANPRPDALMKEQLTEM 251
Query: 736 TGLSKRVTQVWFQNSRARQKK 756
TGLS RV +VWFQN R + KK
Sbjct: 252 TGLSPRVIRVWFQNKRCKDKK 272
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S + ++K R+RT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R
Sbjct: 208 SRNKETKTTRIRTVLNEKQLHTLRTCYSANPRPDALMKEQLTEMTGLSPRVIRVWFQNKR 267
Query: 113 ARQKK 117
+ KK
Sbjct: 268 CKDKK 272
>gi|348543221|ref|XP_003459082.1| PREDICTED: LIM/homeobox protein Lhx9-like [Oreochromis niloticus]
Length = 509
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 28/169 (16%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLE 675
G +C++C + I +SD V ++ + +H CF+C+ C +L G + + + C+SHY
Sbjct: 231 GGQCARCFQPIPASDLVMRSGELTFHPHCFSCQECDVKLMPGNLYCMQGANLYCQSHYQS 290
Query: 676 LVDGGTTSSDD------------GADSESSHSKS--------------KAKRVRTTFTEE 709
DGG S D G ES S + KR+RT F E
Sbjct: 291 --DGGVQSPPDLQPKHHLDAQVSGEGEESVSSPEPRSDDRAAGGRIPRRTKRIRTCFRSE 348
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
QL+ L++ F NPDG+D +A TGL KRV QVWFQN+RA+ ++ L
Sbjct: 349 QLRALESYFAQKHNPDGKDWTCLAHKTGLPKRVLQVWFQNARAKLRRSL 397
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 28 LQANFQLDSNPDGFGADSTDHTDSESSHSKS------KAKRVRTTFTEEQLQVLQANFQL 81
LQ LD+ G G +S + S + + KR+RT F EQL+ L++ F
Sbjct: 300 LQPKHHLDAQVSGEGEESVSSPEPRSDDRAAGGRIPRRTKRIRTCFRSEQLRALESYFAQ 359
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
NPDG+D +A TGL KRV QVWFQN+RA+ ++ L
Sbjct: 360 KHNPDGKDWTCLAHKTGLPKRVLQVWFQNARAKLRRSL 397
>gi|443696308|gb|ELT97041.1| hypothetical protein CAPTEDRAFT_43751, partial [Capitella teleta]
Length = 271
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 99/209 (47%), Gaps = 62/209 (29%)
Query: 612 FRSFGAK-CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F K CS C I++++ V KARD VYH+ CF C +C + L TGE F + E+ + C+
Sbjct: 56 YRLFAIKRCSGCHLAISANELVMKARDSVYHMNCFTCASCHKLLITGEHFGMKENLIYCR 115
Query: 671 SHYLELVDGGTTSSD--DGADSES----------------SHSKSKAK---RVRTTFTEE 709
HY +V G S G DS S H+ S K R R E+
Sbjct: 116 MHYEMVVQGEFYPSPGHGGLDSVSFPALHGPGAMPHVFNGVHAPSAPKGRPRKRKRQAED 175
Query: 710 QLQ----------------------------------------VLQANFQLDSNPDGQDL 729
+L+ ++++ FQL+ NPD +DL
Sbjct: 176 ELEMCGRSLHGFNENDLPGLGNDMSMQARQKRMRTSFKHHQLRIMKSYFQLNHNPDAKDL 235
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+++AQ TGLSKRV QVWFQN+RA+ +++L
Sbjct: 236 KQLAQKTGLSKRVLQVWFQNARAKHRRNL 264
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 53/63 (84%)
Query: 57 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
+++ KR+RT+F QL+++++ FQL+ NPD +DL+++AQ TGLSKRV QVWFQN+RA+ +
Sbjct: 202 QARQKRMRTSFKHHQLRIMKSYFQLNHNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKHR 261
Query: 117 KHL 119
++L
Sbjct: 262 RNL 264
>gi|443694945|gb|ELT95963.1| hypothetical protein CAPTEDRAFT_167213 [Capitella teleta]
Length = 352
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R + A+CS C + + S++ V +A HV+HL CF C AC QL G++F + + ++ C++
Sbjct: 68 RLYAARCSACVQTVPSNELVMRAVGHVFHLQCFVCVACGHQLQRGDQFVVKDGQLFCRAD 127
Query: 673 Y--------LELVDGGTTSSDDGA--DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
+ + G +T SD+ + D + ++ KR RT T Q + +A+F+++
Sbjct: 128 FEREFLMQHPDWCSGYSTKSDEESSIDENDADNQKGPKRPRTILTTSQRRKFKASFEVNP 187
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 188 KPCRKIRESLASETGLSVRVVQVWFQNQRAKMKK 221
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
+D D + ++ KR RT T Q + +A+F+++ P + E +A TGLS R
Sbjct: 147 SDEESSIDENDADNQKGPKRPRTILTTSQRRKFKASFEVNPKPCRKIRESLASETGLSVR 206
Query: 103 VTQVWFQNSRARQKK 117
V QVWFQN RA+ KK
Sbjct: 207 VVQVWFQNQRAKMKK 221
>gi|196013287|ref|XP_002116505.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
gi|190581096|gb|EDV21175.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
Length = 265
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 24/166 (14%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F +C+KC R S+++ +A+ + YH+ CF C +C R+L G+ + + + CK HYL
Sbjct: 75 FHNRCTKCNRIFEPSEFIMRAKGNPYHIDCFRCHSCMRKLIPGDRYGVDTYILYCKEHYL 134
Query: 675 E--------------LVDGGTTSSDD-GADSESSHSKSK---------AKRVRTTFTEEQ 710
+ D +SD+ S+S+H+KSK R+RT E+Q
Sbjct: 135 NKMSSSSNHDTLQSTMADSDWQNSDNTDTKSQSTHAKSKQLTSRKGMKGTRIRTVLNEKQ 194
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
LQ L++ + + PD E++ ++TGL+ RV +VWFQN R + KK
Sbjct: 195 LQTLRSYYASNPRPDSTVKEKLVELTGLNPRVIRVWFQNKRCKDKK 240
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 36 SNPDGFGADSTDHTDSESSHSKSK---------AKRVRTTFTEEQLQVLQANFQLDSNPD 86
++ D +D+TD T S+S+H+KSK R+RT E+QLQ L++ + + PD
Sbjct: 151 ADSDWQNSDNTD-TKSQSTHAKSKQLTSRKGMKGTRIRTVLNEKQLQTLRSYYASNPRPD 209
Query: 87 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
E++ ++TGL+ RV +VWFQN R + KK
Sbjct: 210 STVKEKLVELTGLNPRVIRVWFQNKRCKDKK 240
>gi|3046880|gb|AAC13544.1| LIM-homeodomain protein LMX1B/LMX1.2 [Homo sapiens]
Length = 161
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 24/159 (15%)
Query: 622 CCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVDGGT 681
C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y + D +
Sbjct: 1 CMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLS 60
Query: 682 TSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQLQVLQAN 717
+ S D +DS + S SK + KR RT T +Q + +A+
Sbjct: 61 SVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKAS 120
Query: 718 FQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 121 FEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 159
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 84 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 143
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 144 RVVQVWFQNQRAKMKK 159
>gi|56694840|gb|AAW23082.1| Islet [Oikopleura dioica]
Length = 381
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R + C+KC + +D V K ++ +H+ CF+C +C R L +G+EF L E R+ C+
Sbjct: 100 RLYMEHCAKCDHALQPTDLVHKVKNCTFHVDCFSCSSCVRVLVSGDEFLLIETRLFCRPC 159
Query: 673 YLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+ EL + + +K K RVRT E+QL L+ +Q + PD E++
Sbjct: 160 H-ELESEQSRQNQFRCREMERRNKPKTTRVRTVLNEKQLHTLRTCYQANPRPDALMKEQL 218
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
++TGLS RV +VWFQN R + KK
Sbjct: 219 VEMTGLSPRVIRVWFQNKRCKDKK 242
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 115
+K K RVRT E+QL L+ +Q + PD E++ ++TGLS RV +VWFQN R +
Sbjct: 181 NKPKTTRVRTVLNEKQLHTLRTCYQANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKD 240
Query: 116 KK 117
KK
Sbjct: 241 KK 242
>gi|351696664|gb|EHA99582.1| LIM/homeobox protein Lhx1 [Heterocephalus glaber]
Length = 406
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 84/171 (49%), Gaps = 37/171 (21%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLSNSNVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 745
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QV
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 226
>gi|321469905|gb|EFX80883.1| hypothetical protein DAPPUDRAFT_50562 [Daphnia pulex]
Length = 315
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 21/165 (12%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCKS 671
R FGAKC KC G + SD+V +A+ +YH+ CF C C+RQL G+EFAL +D + CK
Sbjct: 57 RLFGAKCDKCGLGFSRSDFVMRAKSKIYHIECFRCALCQRQLVPGDEFALRDDGNLFCKD 116
Query: 672 HY--------------------LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQL 711
+ GG S + S K RVRT E+QL
Sbjct: 117 DHDQTNNNNNNSSNQNNNNNNNNGGGMGGVGGSGGVSGGGGGGSDGKPTRVRTVLNEKQL 176
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 177 HTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 221
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 162 GKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 221
>gi|344235434|gb|EGV91537.1| LIM homeobox transcription factor 1-beta [Cricetulus griseus]
Length = 233
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 24/155 (15%)
Query: 626 IASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVDGGTTSSD 685
IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y + D ++ S
Sbjct: 4 IAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVSP 63
Query: 686 DGADS---------------ESSHSKS---------KAKRVRTTFTEEQLQVLQANFQLD 721
D +DS + S SK + KR RT T +Q + +A+F++
Sbjct: 64 DESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVS 123
Query: 722 SNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 124 SKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 158
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G S + + KR RT T +Q + +A+F++ S P + E +A TGLS
Sbjct: 83 GQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSV 142
Query: 102 RVTQVWFQNSRARQKK 117
RV QVWFQN RA+ KK
Sbjct: 143 RVVQVWFQNQRAKMKK 158
>gi|260447067|ref|NP_001159513.1| ISL LIM homeobox 2 [Xenopus (Silurana) tropicalis]
gi|257043811|gb|ACV33233.1| islet 2 [Xenopus (Silurana) tropicalis]
Length = 333
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R F A+C +C + S+ V + + VYH CF C C R+L GEE +L + +LC +
Sbjct: 82 IRLFSARCPRCQGTLPRSELVMRVGERVYHTDCFRCSVCSRRLLPGEEISLRDQDLLCGA 141
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
+ L D G SS S K RVRT E+QL L+ + + PD E+
Sbjct: 142 EH-NLSDSGRPSS---LRSHIHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQ 197
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+ ++TGLS RV +VWFQN R + KK
Sbjct: 198 LVEMTGLSPRVIRVWFQNKRCKDKK 222
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 164 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 222
>gi|595301|gb|AAA80275.1| LIM domain homeobox protein, partial [Danio rerio]
Length = 167
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF++ ++ +LC++
Sbjct: 12 VRLFGIKCAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRA 71
Query: 672 HY---LELVDGGTTSSDDGADSESSHSKS-------------------KAKRVRTTFTEE 709
+ LE GG+ S + H + K RVRT E+
Sbjct: 72 DHGLALERGPGGSPLSPGNIHTRGLHMAADPVSVRQTPHRNHVHKQSEKTTRVRTVLNEK 131
Query: 710 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 745
QL L+ + + PD E++ ++TGLS RV +V
Sbjct: 132 QLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRV 167
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
K RVRT E+QL L+ + + PD E++ ++TGLS RV +V
Sbjct: 120 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRV 167
>gi|339238047|ref|XP_003380578.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
gi|316976506|gb|EFV59791.1| LIM/homeobox protein Lhx9 [Trichinella spiralis]
Length = 337
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 67/206 (32%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
+ F +CS+C R + D V +ARD+V+HL CF C C + G F L + ++ C +
Sbjct: 65 KQFSKRCSRCNRVVLPKDLVMRARDYVFHLHCFTCVVCNVPMQPGSLFGLGNNGLIYCNA 124
Query: 672 HYLELVDGGTTSSDD--------------------------------------------- 686
H GGT S+++
Sbjct: 125 HC-----GGTWSANEHGNASPVTCQAGTGPYWSVSHSTEKPRSKGRPRRRKVTVEQLKPM 179
Query: 687 GADSESSHSKS----------------KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
ADS+ S KS + KR+RT+F ++QL+ ++A FQ++ NPD +DL+
Sbjct: 180 SADSDCSVEKSSEENSRCHSSSGMQIMRPKRMRTSFKQQQLRTMKAYFQMNHNPDAKDLK 239
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++AQ TGL+KR+ QVWFQN+RA+ ++
Sbjct: 240 QLAQKTGLTKRILQVWFQNARAKYRR 265
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 10 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTE 69
+SK + R T EQL+ + A+ ++ S S + KR+RT+F +
Sbjct: 161 RSKGRPRRRKVTVEQLKPMSADSDCSVEKS---SEENSRCHSSSGMQIMRPKRMRTSFKQ 217
Query: 70 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+QL+ ++A FQ++ NPD +DL+++AQ TGL+KR+ QVWFQN+RA+ ++
Sbjct: 218 QQLRTMKAYFQMNHNPDAKDLKQLAQKTGLTKRILQVWFQNARAKYRR 265
>gi|326666245|ref|XP_001922131.3| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Danio
rerio]
Length = 396
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 18/160 (11%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C + I S+ + + VYHL CF+C C+R+L G+EF L E ++LC+ Y
Sbjct: 115 FVRKCSACLQAIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRGDYE 174
Query: 674 -----LELVDGGTTSSDDGADSESSHSKS------------KAKRVRTTFTEEQLQVLQA 716
L + T S D E ++KR RT T +Q + +A
Sbjct: 175 KEREMLAAISPAPTESVKSEDEEGGGVSVGGKAGDDGKEHKRSKRPRTILTTQQRRAFKA 234
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+F++ S P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 235 SFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 274
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
++KR RT T +Q + +A+F++ S P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 216 RSKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 274
>gi|345325463|ref|XP_003430923.1| PREDICTED: hypothetical protein LOC100085508 [Ornithorhynchus
anatinus]
Length = 884
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 78/135 (57%), Gaps = 14/135 (10%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 632 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 691
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y T +D DSE+ AKR RTT T +QL+ L+ ++ P E
Sbjct: 692 EDYE------TAKQND--DSEAG-----AKRPRTTITAKQLETLKNAYKNSPKPARHVRE 738
Query: 731 RIAQITGLSKRVTQV 745
+++ TGL RV Q
Sbjct: 739 QLSSETGLDMRVVQT 753
>gi|348551170|ref|XP_003461403.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Cavia porcellus]
Length = 404
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 37/182 (20%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL---------------------------------ELVDGGTTSSDDGADSESSHSKS 697
YL + D T+S + A++E+ S
Sbjct: 117 DDYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNS 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLS-KRVTQVWFQNSRARQ 754
KR RTT +QL+ L+A F +P A L+ ++QVWFQN R+++
Sbjct: 177 GTKRRGPRTTIKAKQLETLKAAFAATPSPRAIPRGEGAPDPELTAPPLSQVWFQNRRSKE 236
Query: 755 KK 756
++
Sbjct: 237 RR 238
>gi|324511990|gb|ADY44978.1| Protein lin-11 [Ascaris suum]
Length = 368
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 39/194 (20%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKS 671
R FG +C+ C + +D VR+ARD V+H+ CF C C+++L TGE+ + L+ +R +CK
Sbjct: 57 RRFGTRCAGCNVALDRNDLVRRARDKVFHVQCFQCTVCQKKLDTGEQLYILNGNRFVCKH 116
Query: 672 HYL---ELVDGGTTSSDDGA------------DSESSHS-------------------KS 697
YL EL GG +S+ G+ D E S+S +
Sbjct: 117 DYLANPELFAGGGGTSECGSEEIDEDCDEASDDIEESNSTGHQEVNGDSVCSGKLDDLSA 176
Query: 698 KAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
AKR RTT +QL L+A F P E++AQ TGL+ RV QVWFQN R++++
Sbjct: 177 SAKRRGPRTTIKAKQLDTLKAAFASTPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKER 236
Query: 756 --KHLHTGKMKSSQ 767
K L G + ++
Sbjct: 237 RMKQLRYGGYRPTR 250
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 115
+ +K + RTT +QL L+A F P E++AQ TGL+ RV QVWFQN R+++
Sbjct: 176 ASAKRRGPRTTIKAKQLDTLKAAFASTPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKE 235
Query: 116 K--KHLHTGKMKSSQ 128
+ K L G + ++
Sbjct: 236 RRMKQLRYGGYRPTR 250
>gi|351702111|gb|EHB05030.1| LIM/homeobox protein Lhx2 [Heterocephalus glaber]
Length = 502
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 56/203 (27%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE------------ 658
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+
Sbjct: 219 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 278
Query: 659 ---------EFALHEDRVLCK----------------------------SHYLELVDGGT 681
E+ H + LC+ +L +
Sbjct: 279 LHFEALLQGEYPAHFNHALCRRGGRGSARALARGRIWQPTMLARSLAFSGSFLLVPRACW 338
Query: 682 TSSDDGADSE------SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
S + D+E S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 339 ALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQK 398
Query: 736 TGLSKRVTQVWFQNSRARQKKHL 758
TGL+KRV QVWFQN+RA+ +++L
Sbjct: 399 TGLTKRVLQVWFQNARAKFRRNL 421
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 6/101 (5%)
Query: 20 FTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKS-KAKRVRTTFTEEQLQVLQAN 78
F+ L V +A + L N + +H D + + S K KR+RT+F QL+ +++
Sbjct: 326 FSGSFLLVPRACWALSCN-----ENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSY 380
Query: 79 FQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 381 FAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 421
>gi|326930568|ref|XP_003211418.1| PREDICTED: LIM/homeobox protein LMX-1.2-like [Meleagris gallopavo]
Length = 281
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 82/160 (51%), Gaps = 35/160 (21%)
Query: 626 IASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY------------ 673
IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 4 IAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKDLLSSVSP 63
Query: 674 --------------LELVDGGTT---SSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQA 716
++ G T SDDG D + KR RT T +Q + +A
Sbjct: 64 DDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPR------RPKRPRTILTTQQRRAFKA 117
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 118 SFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 157
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ + KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN
Sbjct: 91 SDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 150
Query: 111 SRARQKK 117
RA+ KK
Sbjct: 151 QRAKMKK 157
>gi|313233722|emb|CBY09892.1| unnamed protein product [Oikopleura dioica]
Length = 403
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 21/165 (12%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK-S 671
R + C+KC + +D V K ++ +H+ CF+C +C R L +G+EF L E R+ C+
Sbjct: 100 RLYMEHCAKCDHALQPTDLVHKVKNCTFHVDCFSCSSCVRVLVSGDEFLLIETRLFCRPC 159
Query: 672 HYLE-----------LVDGGTTSSDDGADSESSHSKSKAK---------RVRTTFTEEQL 711
H LE G T GA ++ ++K +K RVRT E+QL
Sbjct: 160 HELESEQSRIGSRYITRTAGETDRKYGAPEQAENNKVTSKFFSMSSYFRRVRTVLNEKQL 219
Query: 712 QVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ +Q + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 220 HTLRTCYQANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 264
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+RVRT E+QL L+ +Q + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 208 RRVRTVLNEKQLHTLRTCYQANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 264
>gi|13516919|dbj|BAB40339.1| islet [Halocynthia roretzi]
Length = 432
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 85/200 (42%), Gaps = 58/200 (29%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
FG KC+KC G +D+V +AR+ +YH+ CF C AC +QL G+EFAL ED + CK+ +
Sbjct: 83 FGTKCNKCGLGFTKNDFVMRARNKIYHIECFKCVACSKQLIPGDEFALREDGLFCKADHD 142
Query: 674 -----------LELVDGGTTSSDDGADSESSHSKS------------------------- 697
L L +G +G S S +
Sbjct: 143 VVERNCLVGDVLSLSNGNDHRMTNGMSPMSMQSGNVLSPVMGGVGPPVGHMGGMVNGGTP 202
Query: 698 ---------------------KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
K RVRT E+QL L+ + + PD E++ ++T
Sbjct: 203 GGTSSSSGGSSGGGRRSHKDPKTTRVRTVLNEKQLHTLRTCYGANPRPDALMKEQLVEMT 262
Query: 737 GLSKRVTQVWFQNSRARQKK 756
LS RV +VWFQN R + KK
Sbjct: 263 ALSPRVIRVWFQNKRCKDKK 282
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 55 HSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 114
H K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R +
Sbjct: 220 HKDPKTTRVRTVLNEKQLHTLRTCYGANPRPDALMKEQLVEMTALSPRVIRVWFQNKRCK 279
Query: 115 QKK 117
KK
Sbjct: 280 DKK 282
>gi|380030211|ref|XP_003698747.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta-like [Apis florea]
Length = 402
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C I+ SD+V + V+H+ CFAC C + L G + L + + +C+
Sbjct: 111 RIFGVKCARCMEKISCSDFVLRTPGSVFHVECFACCMCGQPLPPGAHYXLRQGQPICRRD 170
Query: 673 YL-ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y EL D D+ + KR RT T Q + +A+F++ P + E
Sbjct: 171 YEHELYLNSPQDDDLLDDNRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREA 230
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A+ TGLS RV QVWFQN RA+ KK
Sbjct: 231 LAKDTGLSVRVVQVWFQNQRAKMKK 255
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
D+ + KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQ
Sbjct: 188 DNRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQ 247
Query: 110 NSRARQKK 117
N RA+ KK
Sbjct: 248 NQRAKMKK 255
>gi|328779726|ref|XP_001120677.2| PREDICTED: LIM homeobox transcription factor 1-beta-like [Apis
mellifera]
Length = 402
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C I+ SD+V + V+H+ CFAC C + L G + L + + +C+
Sbjct: 111 RIFGVKCARCMEKISCSDFVLRTPGSVFHVECFACCMCGQPLPPGAHYFLRQGQPICRRD 170
Query: 673 YL-ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y EL D D+ + KR RT T Q + +A+F++ P + E
Sbjct: 171 YEHELYLNSPQDDDLLDDNRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREA 230
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A+ TGLS RV QVWFQN RA+ KK
Sbjct: 231 LAKDTGLSVRVVQVWFQNQRAKMKK 255
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
D+ + KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQ
Sbjct: 188 DNRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQ 247
Query: 110 NSRARQKK 117
N RA+ KK
Sbjct: 248 NQRAKMKK 255
>gi|350402518|ref|XP_003486514.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
impatiens]
Length = 402
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C I+ SD+V +A V+H+ CFAC C + L G ++ L + + +C+
Sbjct: 111 RIFGVKCARCMEKISCSDFVLRAPGLVFHVECFACCMCGQPLLPGTQYFLRQGQPICRRD 170
Query: 673 YLELVDGGTTSSDDGAD-SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y + + DD D + + KR RT T Q + +A F++ P + E
Sbjct: 171 YEHELYLNSPQDDDLLDENRPRDGRRGPKRPRTILTSAQRRQFKAAFEVSPKPCRKVREA 230
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A+ TGLS RV QVWFQN RA+ KK
Sbjct: 231 LAKETGLSVRVVQVWFQNQRAKMKK 255
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A F++ P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 198 PKRPRTILTSAQRRQFKAAFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRAKMKK 255
>gi|340711972|ref|XP_003394539.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
terrestris]
Length = 402
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C I+ SD+V +A V+H+ CFAC C + L G ++ L + + +C+
Sbjct: 111 RIFGVKCARCMEKISCSDFVLRAPGLVFHVECFACCMCGQPLLPGTQYFLRQGQPICRRD 170
Query: 673 YLELVDGGTTSSDDGAD-SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y + + DD D + + KR RT T Q + +A F++ P + E
Sbjct: 171 YEHELYLNSPQDDDLLDENRPRDGRRGPKRPRTILTSAQRRQFKAAFEVSPKPCRKVREA 230
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A+ TGLS RV QVWFQN RA+ KK
Sbjct: 231 LAKETGLSVRVVQVWFQNQRAKMKK 255
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A F++ P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 198 PKRPRTILTSAQRRQFKAAFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRAKMKK 255
>gi|383861320|ref|XP_003706134.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Megachile
rotundata]
Length = 402
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C I+ SD+V + V+H+ CFAC C + L G ++ L + + +C+
Sbjct: 111 RIFGVKCARCMEKISCSDFVLRTPGLVFHVECFACCMCGQPLPPGTQYFLRQGQPICRRD 170
Query: 673 YLELVDGGTTSSDDGAD-SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y + + DD D + + KR RT T Q + +A+F++ P + E
Sbjct: 171 YEHELYLNSPQDDDLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREA 230
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A+ TGLS RV QVWFQN RA+ KK
Sbjct: 231 LAKDTGLSVRVVQVWFQNQRAKMKK 255
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 198 PKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 255
>gi|122053813|gb|ABM65885.1| LHX6 [Ateles geoffroyi]
Length = 113
Score = 98.2 bits (243), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 53/67 (79%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 40 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 99
Query: 672 HYLELVD 678
HY +++
Sbjct: 100 HYDTMIE 106
>gi|120974023|gb|ABM46619.1| LHX6 [Gorilla gorilla]
gi|121221779|gb|ABM47587.1| LHX6 [Saguinus labiatus]
Length = 114
Score = 98.2 bits (243), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/67 (61%), Positives = 53/67 (79%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 40 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 99
Query: 672 HYLELVD 678
HY +++
Sbjct: 100 HYDTMIE 106
>gi|170592735|ref|XP_001901120.1| Homeobox domain containing protein [Brugia malayi]
gi|158591187|gb|EDP29800.1| Homeobox domain containing protein [Brugia malayi]
Length = 212
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 28/170 (16%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE--DRVLCK--- 670
KC +C I+ +D V K R YH ACF+C +C+++L+ GEEF E D VLC+
Sbjct: 10 AKKCIRCKEYISKTDMVMKIRTLTYHAACFSCSSCEKKLTVGEEFVFREREDDVLCRVDC 69
Query: 671 ---------SHYLELV--------DGGTTSSDDGADSES------SHSKSKAKRVRTTFT 707
S ++ DG T +S D S + S ++ RVRT
Sbjct: 70 DATNIEQPSSIKTDIYGREDEDGWDGSTLTSLDNQMSSTPPLSLRSPKSDESTRVRTVLN 129
Query: 708 EEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
E+QL L+A + ++ PD E + ++TGLS RV +VWFQN R + KK
Sbjct: 130 EKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQNKRCKDKKR 179
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 23 EQLQVLQANFQLDSNPDGFGADSTDHTDSESSHS---------KSKAKRVRTTFTEEQLQ 73
EQ ++ + + DG+ + D++ S + ++ RVRT E+QL
Sbjct: 75 EQPSSIKTDIYGREDEDGWDGSTLTSLDNQMSSTPPLSLRSPKSDESTRVRTVLNEKQLM 134
Query: 74 VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
L+A + ++ PD E + ++TGLS RV +VWFQN R + KK
Sbjct: 135 TLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQNKRCKDKKR 179
>gi|395513919|ref|XP_003761169.1| PREDICTED: LIM/homeobox protein Lhx5 [Sarcophilus harrisii]
Length = 383
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 81/169 (47%), Gaps = 36/169 (21%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKSHY 673
FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK Y
Sbjct: 72 FGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDY 131
Query: 674 L---------------------------------ELVDGGTTSSDDGADSESSHSKSKAK 700
L + D T+S + ++E+ S K
Sbjct: 132 LNSPSVKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETTNNENEEQNSGTK 191
Query: 701 R--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
R RTT +QL+ L+A F P E++AQ TGL+ RV Q F
Sbjct: 192 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQTVF 240
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T + ++E +S +K + RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 178 TTNNENEEQNSGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 237
Query: 106 VWF 108
F
Sbjct: 238 TVF 240
>gi|195493808|ref|XP_002094572.1| GE21898 [Drosophila yakuba]
gi|194180673|gb|EDW94284.1| GE21898 [Drosophila yakuba]
Length = 642
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KCS CC I + V R ++V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 328 RLFGVKCSSCCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 387
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 388 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 447
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 448 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 481
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 425 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 481
>gi|324512462|gb|ADY45163.1| LIM/homeobox protein Lhx9 [Ascaris suum]
Length = 258
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 37/165 (22%)
Query: 634 KARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHYLELVDG------------- 679
+AR+ V+HL CF C C L GE FA+ E L C+ HY E V+
Sbjct: 2 RAREAVFHLRCFTCIVCSAPLHPGELFAMGEHGTLYCQGHY-EPVNAASSECPLIRTEPT 60
Query: 680 -------------GTTSSDDG---------ADSESSHSKSKAKRVRTTFTEEQLQVLQAN 717
G +S+DG D E ++KR+RT+F QL+ +++
Sbjct: 61 EVRFGRGKTRCRKGKKTSEDGENGSDNIDYCDDEVLTQSGRSKRMRTSFKHHQLRTMKSY 120
Query: 718 FQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 762
F L+ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++ G+
Sbjct: 121 FNLNHNPDAKDLKQLAQRTGLTKRVLQVWFQNARAKFRRNTMQGR 165
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 59/82 (71%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G+D+ D+ D E ++KR+RT+F QL+ +++ F L+ NPD +DL+++AQ TGL+K
Sbjct: 84 GSDNIDYCDDEVLTQSGRSKRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTK 143
Query: 102 RVTQVWFQNSRARQKKHLHTGK 123
RV QVWFQN+RA+ +++ G+
Sbjct: 144 RVLQVWFQNARAKFRRNTMQGR 165
>gi|293339636|gb|ADE44110.1| tailup [Megaselia abdita]
Length = 348
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 86/191 (45%), Gaps = 36/191 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CK- 670
R F AKC KC + +D+V +AR ++H+ CF C C QL G+EFAL + VL CK
Sbjct: 45 RLFRAKCDKCGNSFSRNDYVMRARTKIFHMDCFRCNTCAIQLKPGQEFALRDGGVLYCKE 104
Query: 671 -------------------------------SHYLELVDGGTTSSDDGADSE---SSHSK 696
S L D G+ S + E S S
Sbjct: 105 DHDILEKSHSQTNISSIETNNNTNLNNNNHSSELGSLSDSGSESGSHKSIREKRPSGPSD 164
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 165 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 224
Query: 757 HLHTGKMKSSQ 767
K++ Q
Sbjct: 225 KTIQMKLQMQQ 235
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R
Sbjct: 160 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKR 219
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQ 164
+ KK K++ Q + K GY + P ++ L H + VQ
Sbjct: 220 CKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMVASSP-VRHDSPLNLHGIDVQ 272
>gi|402593440|gb|EJW87367.1| homeobox domain-containing protein [Wuchereria bancrofti]
Length = 197
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 28/170 (16%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE--DRVLCK--- 670
KC +C I+ +D V K R YH ACF+C +C+++L+ GEEF E D VLC+
Sbjct: 10 AKKCIRCKEYISKTDMVMKIRTLTYHAACFSCSSCEKKLTVGEEFVFREREDDVLCRVDC 69
Query: 671 ---------SHYLELV--------DGGTTSSDDGADSES------SHSKSKAKRVRTTFT 707
S ++ DG T +S D S + S ++ RVRT
Sbjct: 70 DTTNIEQPSSIKTDIYGREDEDGWDGSTLTSLDNQMSSTPPLSLRSPKSDESTRVRTVLN 129
Query: 708 EEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
E+QL L+A + ++ PD E + ++TGLS RV +VWFQN R + KK
Sbjct: 130 EKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQNKRCKDKKR 179
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 23 EQLQVLQANFQLDSNPDGFGADSTDHTDSESSHS---------KSKAKRVRTTFTEEQLQ 73
EQ ++ + + DG+ + D++ S + ++ RVRT E+QL
Sbjct: 75 EQPSSIKTDIYGREDEDGWDGSTLTSLDNQMSSTPPLSLRSPKSDESTRVRTVLNEKQLM 134
Query: 74 VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
L+A + ++ PD E + ++TGLS RV +VWFQN R + KK
Sbjct: 135 TLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQNKRCKDKKR 179
>gi|313239000|emb|CBY13986.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHYL 674
G +C++C I + + A+ +H CF C C + +G++F L D L C +H
Sbjct: 39 GNQCTRCGFPIKPGEMFQTAKFSKFHWNCFCCVVCNTPIKSGDQFMLTSDSFLTCMAHTN 98
Query: 675 ELVDGGTTSSDDGADSE------SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
+ SS DG+ + S + K KR+RT+F Q+ ++ FQ+ NPD D
Sbjct: 99 QF---WPPSSQDGSHYDYKSIRASFDPRYKQKRIRTSFKNYQINAMKRAFQMKPNPDASD 155
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ +A TGL+KRV QVWFQN+RA+Q+K
Sbjct: 156 LKTLAVETGLTKRVLQVWFQNARAKQRK 183
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
K KR+RT+F Q+ ++ FQ+ NPD DL+ +A TGL+KRV QVWFQN+RA+Q+K
Sbjct: 125 KQKRIRTSFKNYQINAMKRAFQMKPNPDASDLKTLAVETGLTKRVLQVWFQNARAKQRK- 183
Query: 119 LHTGKMKSSQNRPK 132
L T + K + P+
Sbjct: 184 LTTDQRKVETSSPE 197
>gi|242007292|ref|XP_002424475.1| Insulin gene enhancer protein ISL-2, putative [Pediculus humanus
corporis]
gi|212507893|gb|EEB11737.1| Insulin gene enhancer protein ISL-2, putative [Pediculus humanus
corporis]
Length = 396
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R + KC C I++ + V KA D V+HL CF C C +L G++F + + ++ C+
Sbjct: 60 RLYAKKCLGCSERISADELVMKALDSVFHLRCFICVVCGVRLQRGDQFVIKQGQLFCRPD 119
Query: 673 Y---LELVDG---GTTSSDDG-ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
Y +E++ G G + DD S + + KR RT T +Q + +A+F++ P
Sbjct: 120 YEKEVEMLQGYAQGDFTCDDLLPSSRNQDGRRGPKRPRTILTTQQRKAFKASFEVSPKPC 179
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ E +A+ TGLS R+ QVWFQN RA+ KK
Sbjct: 180 RKVREALAKDTGLSVRIVQVWFQNQRAKMKK 210
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 22 EEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQL 81
E+++++LQ Q D D S + + KR RT T +Q + +A+F++
Sbjct: 121 EKEVEMLQGYAQGDFTCDDLLPSSRNQ------DGRRGPKRPRTILTTQQRKAFKASFEV 174
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
P + E +A+ TGLS R+ QVWFQN RA+ KK
Sbjct: 175 SPKPCRKVREALAKDTGLSVRIVQVWFQNQRAKMKK 210
>gi|338720274|ref|XP_001916843.2| PREDICTED: LIM/homeobox protein Lhx6-like [Equus caballus]
Length = 239
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 58/76 (76%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG 687
HY +++ ++++G
Sbjct: 184 HYDTMIENLKRAAENG 199
>gi|149058479|gb|EDM09636.1| LIM homeobox 9, isoform CRA_d [Rattus norvegicus]
Length = 267
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 54/182 (29%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C++H+ L+
Sbjct: 84 RCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFETLL 143
Query: 678 DG------------------------GTTSSDDG---------------------ADSES 692
G GT + G ++E+
Sbjct: 144 QGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNSGCNENEA 203
Query: 693 SH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV
Sbjct: 204 DHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVL 263
Query: 744 QV 745
Q+
Sbjct: 264 QL 265
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 197 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 256
Query: 98 GLSKRVTQV 106
GL+KRV Q+
Sbjct: 257 GLTKRVLQL 265
>gi|149058476|gb|EDM09633.1| LIM homeobox 9, isoform CRA_b [Rattus norvegicus]
Length = 282
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 54/181 (29%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C++H+ L+
Sbjct: 84 RCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFETLL 143
Query: 678 DG------------------------GTTSSDDG---------------------ADSES 692
G GT + G ++E+
Sbjct: 144 QGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNSGCNENEA 203
Query: 693 SH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV
Sbjct: 204 DHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVL 263
Query: 744 Q 744
Q
Sbjct: 264 Q 264
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 197 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 256
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 257 GLTKRVLQ 264
>gi|449479889|ref|XP_004177057.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Taeniopygia guttata]
Length = 419
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 83/171 (48%), Gaps = 37/171 (21%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ + K
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVDK 115
Query: 671 SHYLE---------------------LVDGGTTSSDDGADSESSHSKSK----------- 698
YL D S DD DSES++ K
Sbjct: 116 EDYLNNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQN 175
Query: 699 --AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 745
AKR RTT +QL+ L+A F P E++AQ TGL+ RV QV
Sbjct: 176 LGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 226
>gi|410902629|ref|XP_003964796.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Takifugu
rubripes]
Length = 376
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 18/160 (11%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C + I S+ + + + VYHL CF C C+R+L G+EF L E ++LC+ Y
Sbjct: 87 FVRKCSSCLQVIGRSELIMRVQGQVYHLGCFTCCECERRLQRGDEFVLKEGQLLCRMDYE 146
Query: 674 --LELVDGGTTSSDDGADSESSHSKS---------------KAKRVRTTFTEEQLQVLQA 716
E++ + + + SE ++KR RT T +Q + +A
Sbjct: 147 KEREMLAAISPTPTESVKSEDEDGGVGSGGGKGVDDGKEHKRSKRPRTILTTQQRRAFKA 206
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+F++ + P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 207 SFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 246
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
++KR RT T +Q + +A+F++ + P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 188 RSKRPRTILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 246
>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
Length = 398
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 84/196 (42%), Gaps = 52/196 (26%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ +YH+ CF C AC RQL G+EFAL + L CK
Sbjct: 63 RLFGTKCDKCGSSFSKNDFVMRAKTKIYHIECFRCSACARQLIPGDEFALRDGGALYCKE 122
Query: 672 HYLELVDGGTTS-----------------------------------------SDDGADS 690
+ L S SD G++S
Sbjct: 123 DHDHLEKSNQNSLIQSVEPNNNISSNTNQNSTSNNNNNTSLSNNNHSSELGSMSDSGSES 182
Query: 691 ----------ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 740
S S K RVRT E+QL L+ + + PD E++ ++TGLS
Sbjct: 183 GSHKSMRGKGPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSP 242
Query: 741 RVTQVWFQNSRARQKK 756
RV +VWFQN R + KK
Sbjct: 243 RVIRVWFQNKRCKDKK 258
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R
Sbjct: 194 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKR 253
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 254 CKDKKKTIQMKLQMQQEKEGRKLGY 278
>gi|358338012|dbj|GAA30958.2| LIM/homeobox protein Awh [Clonorchis sinensis]
Length = 482
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 104
S D + S SK+KR+RT+FT +QL +LQANF +++NPDGQ+LERIA + L+KRVT
Sbjct: 169 SIDSSTSSGCSVHSKSKRIRTSFTPDQLAILQANFDVEANPDGQELERIANVARLNKRVT 228
Query: 105 QVWFQNSRARQKK 117
QVWFQN+RAR+KK
Sbjct: 229 QVWFQNARARKKK 241
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 684 SDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
S D + S SK+KR+RT+FT +QL +LQANF +++NPDGQ+LERIA + L+KRVT
Sbjct: 169 SIDSSTSSGCSVHSKSKRIRTSFTPDQLAILQANFDVEANPDGQELERIANVARLNKRVT 228
Query: 744 QVWFQNSRARQKK 756
QVWFQN+RAR+KK
Sbjct: 229 QVWFQNARARKKK 241
>gi|487805|gb|AAA80274.1| LIM domain homeobox protein, partial [Danio rerio]
Length = 167
Score = 96.7 bits (239), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 22/155 (14%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G SSD V +ARD+VYH+ CF C C R L G+EF+L ++ +LC++
Sbjct: 13 RLFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRAD 72
Query: 673 Y---LELVDGGTTSSDDGADSESS------------------HSKS-KAKRVRTTFTEEQ 710
+ +E G+ S S H +S K RVRT E+Q
Sbjct: 73 HGLLMERASAGSPISPGNIHSSRPLHIPEPVPVRQPPHRNHVHKQSEKTTRVRTVLNEKQ 132
Query: 711 LQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 745
L L+ + + PD E++ ++TGLS RV +V
Sbjct: 133 LHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRV 167
Score = 40.8 bits (94), Expect = 2.8, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 55 HSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
H +S K RVRT E+QL L+ + + PD E++ ++TGLS RV +V
Sbjct: 115 HKQSEKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRV 167
>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
Length = 451
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 86/190 (45%), Gaps = 46/190 (24%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ +YH+ CF C AC RQL G+EFAL + L CK
Sbjct: 112 RLFGTKCDKCGSSFSKNDFVMRAKTKIYHIECFRCSACARQLIPGDEFALRDGGSLYCKE 171
Query: 672 --HYLE------LVDGG-------------------------------TTSSDDGA---- 688
+LE LV G + S+ G+
Sbjct: 172 DHDHLEKSSQNGLVQGAGKQERRIQKNNKHTNKRQSSPSNANVVHVNQNSGSESGSHKSL 231
Query: 689 --DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 746
S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VW
Sbjct: 232 RGKGPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVW 291
Query: 747 FQNSRARQKK 756
FQN R + KK
Sbjct: 292 FQNKRCKDKK 301
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R
Sbjct: 237 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKR 296
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 297 CKDKKKTIQMKLQMQQEKEGRKLGY 321
>gi|194869797|ref|XP_001972523.1| GG15572 [Drosophila erecta]
gi|190654306|gb|EDV51549.1| GG15572 [Drosophila erecta]
Length = 652
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KCS CC I + V R + V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 336 RLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 395
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 396 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 455
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 456 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 489
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 433 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 489
>gi|326931564|ref|XP_003211898.1| PREDICTED: LIM/homeobox protein Lhx1-like [Meleagris gallopavo]
Length = 222
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 81/167 (48%), Gaps = 37/167 (22%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKSHY 673
FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK Y
Sbjct: 6 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 65
Query: 674 LE---------------------LVDGGTTSSDDGADSESSHSKSK-------------A 699
L D S DD DSES++ K A
Sbjct: 66 LNNSNTAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGA 125
Query: 700 KR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
KR RTT +QL+ L+A F P E++AQ TGL+ RV Q
Sbjct: 126 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQ 172
>gi|195012851|ref|XP_001983760.1| GH15398 [Drosophila grimshawi]
gi|193897242|gb|EDV96108.1| GH15398 [Drosophila grimshawi]
Length = 618
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+ CC I + V R ++V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 308 RLFGVKCAACCHAILPQELVMRPISNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 367
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 368 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 427
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 428 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 461
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 405 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 461
>gi|225708026|gb|ACO09859.1| LIM/homeobox protein Lhx9 [Osmerus mordax]
Length = 317
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 54/181 (29%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+ H+ LV
Sbjct: 131 RCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRVHFETLV 190
Query: 678 DG------------------------GTTSSDDG-------------------------- 687
G GT ++ G
Sbjct: 191 QGDYHPQLNYAELAGKGAGLSLPYFNGTGTAQKGRPRKRKSPAMGIDIASYNSGCNENEA 250
Query: 688 ----ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
D +S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV
Sbjct: 251 DHLDRDQQSYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVL 310
Query: 744 Q 744
Q
Sbjct: 311 Q 311
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTD--SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D +S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 244 GCNENEADHLDRDQQSYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 303
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 304 GLTKRVLQ 311
>gi|198464782|ref|XP_001353366.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
gi|198149877|gb|EAL30873.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+ CC I + V R ++V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 310 RLFGVKCASCCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 369
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 370 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 429
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 430 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 463
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 407 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 463
>gi|148707589|gb|EDL39536.1| LIM homeobox protein 9, isoform CRA_a [Mus musculus]
Length = 342
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 55/189 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQV 745
GL+KRV Q+
Sbjct: 296 GLTKRVLQL 304
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQV 106
GL+KRV Q+
Sbjct: 296 GLTKRVLQL 304
>gi|56694828|gb|AAW23076.1| Lhx2/9, partial [Oikopleura dioica]
Length = 229
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHYL 674
G +C++C I + + A+ +H CF C C + +G++F L D L C +H
Sbjct: 69 GNQCTRCGFLIKPGEMFQTAKFSKFHWNCFCCVVCNTPIKSGDQFMLTSDSFLTCMAHTN 128
Query: 675 ELVDGGTTSSDDGADSE------SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 728
+ SS DG+ + S + K KR+RT+F Q+ ++ FQ+ NPD D
Sbjct: 129 QF---WPPSSQDGSHYDYKSIRASFDPRYKQKRIRTSFKNYQINAMKRAFQMKPNPDASD 185
Query: 729 LERIAQITGLSKRVTQVWFQNSRARQKK 756
L+ +A TGL+KRV QVWFQN+RA+Q+K
Sbjct: 186 LKTLAVETGLTKRVLQVWFQNARAKQRK 213
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
K KR+RT+F Q+ ++ FQ+ NPD DL+ +A TGL+KRV QVWFQN+RA+Q+K
Sbjct: 155 KQKRIRTSFKNYQINAMKRAFQMKPNPDASDLKTLAVETGLTKRVLQVWFQNARAKQRK- 213
Query: 119 LHTGKMKSSQNRPK 132
L T + K + P+
Sbjct: 214 LTTDQRKVETSSPE 227
>gi|195376257|ref|XP_002046913.1| GJ13148 [Drosophila virilis]
gi|194154071|gb|EDW69255.1| GJ13148 [Drosophila virilis]
Length = 588
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+ CC I + V R ++V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 277 RLFGVKCAACCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 336
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 337 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 396
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 397 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 430
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 374 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 430
>gi|268576445|ref|XP_002643202.1| C. briggsae CBR-LIM-6 protein [Caenorhabditis briggsae]
Length = 257
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG +C +C ++S+D V + YH CF C +C+ + G+E+ + + V C++ Y
Sbjct: 42 FGKRCRRCMTVLSSTDIVHRVHYMYYHAQCFNCCSCQGPFNLGDEYHVFDGEVFCRNDYQ 101
Query: 675 ELVDGGTTSS---DDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
+ D GT+S DD SE H K+ KR RT +Q + + F+ S P + E+
Sbjct: 102 AMCDFGTSSESMLDDAVQSE-IHRKT-PKRPRTILNAQQRRQFKTAFERSSKPSRKVREQ 159
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A TGLS RV QVWFQN RA+ KK
Sbjct: 160 LANETGLSVRVVQVWFQNQRAKIKK 184
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 41 FGADSTDHTDS--ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
FG S D +S + KR RT +Q + + F+ S P + E++A TG
Sbjct: 106 FGTSSESMLDDAVQSEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETG 165
Query: 99 LSKRVTQVWFQNSRARQKK 117
LS RV QVWFQN RA+ KK
Sbjct: 166 LSVRVVQVWFQNQRAKIKK 184
>gi|121503133|gb|ABM55112.1| LHX6 [Macaca mulatta]
Length = 73
Score = 96.3 bits (238), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/64 (62%), Positives = 52/64 (81%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+ HY
Sbjct: 2 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 61
Query: 675 ELVD 678
+++
Sbjct: 62 TMIE 65
>gi|148224455|ref|NP_001087527.1| LIM/homeobox protein Lhx9 [Xenopus laevis]
gi|82198794|sp|Q68EY3.1|LHX9_XENLA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|51258697|gb|AAH80067.1| Lhx9 protein [Xenopus laevis]
Length = 331
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 54/181 (29%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C++C GI++S+ V +AR+ VYHL+CF C C + LSTG++F + E+ V C+ H+ LV
Sbjct: 133 RCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDQFGMKENLVYCRIHFELLV 192
Query: 678 DG-----------------------------------------------------GTTSS 684
G G +
Sbjct: 193 QGDFHQQLNYTELSAKGGGIAALPYFSNGTGTVQKGRPRKRKSPALGVDIMNYSSGCNEN 252
Query: 685 DDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
+ D + ++ S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV
Sbjct: 253 ETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVL 312
Query: 744 Q 744
Q
Sbjct: 313 Q 313
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL
Sbjct: 248 GCNENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGL 307
Query: 100 SKRVTQ 105
+KRV Q
Sbjct: 308 TKRVLQ 313
>gi|392927445|ref|NP_001257168.1| Protein TTX-3, isoform a [Caenorhabditis elegans]
gi|2795770|gb|AAB97099.1| putative transcription factor TTX-3 [Caenorhabditis elegans]
gi|13548319|emb|CAB03956.3| Protein TTX-3, isoform a [Caenorhabditis elegans]
Length = 409
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 45/207 (21%)
Query: 605 RLSVLICFRSFGAKCSKCCR----GIASSDWVRKARDHVYHLACFACEACKRQLSTGEEF 660
R V +C + KCCR + D V KA++ ++H ACF C C +L+ G+ +
Sbjct: 153 RDGVFLCRADHAKRYQKCCRKCEIPLNREDMVMKAKEMIFHHACFVCFICGIKLNPGDYY 212
Query: 661 ALH-EDRVLCKSHYLELVDG---------------------------------------G 680
+ + + C +HY +
Sbjct: 213 TMSPQGHLYCHAHYNAVRSTVLCEEAAVATVPAVVAPPPPPPTTTTAPPPAAPEQPPREA 272
Query: 681 TTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLS 739
+T ++ D + + S S ++KR+RT+F QL+ ++ F L+ NPD +DL+++A T L+
Sbjct: 273 STEAEASTDEDGNGSGSQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLT 332
Query: 740 KRVTQVWFQNSRARQKKHLHTGKMKSS 766
KRV QVWFQN+RA+ ++ LH G SS
Sbjct: 333 KRVLQVWFQNARAKYRRELHDGGRSSS 359
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 49 TDSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 107
TD + + S S ++KR+RT+F QL+ ++ F L+ NPD +DL+++A T L+KRV QVW
Sbjct: 280 TDEDGNGSGSQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQVW 339
Query: 108 FQNSRARQKKHLHTGKMKSS 127
FQN+RA+ ++ LH G SS
Sbjct: 340 FQNARAKYRRELHDGGRSSS 359
>gi|195589796|ref|XP_002084635.1| GD14373 [Drosophila simulans]
gi|194196644|gb|EDX10220.1| GD14373 [Drosophila simulans]
Length = 642
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KCS CC I + V R + V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 330 RLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 389
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 390 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 449
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 450 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 483
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 427 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 483
>gi|348578264|ref|XP_003474903.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Cavia
porcellus]
Length = 321
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDGA------------------ 688
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGSLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 689 ---DSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
>gi|348536383|ref|XP_003455676.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Oreochromis
niloticus]
Length = 333
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 56/189 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 127 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCR 186
Query: 671 SHYLELVDG-------------------------GTTSSDDG------------------ 687
H+ LV G GT ++ G
Sbjct: 187 LHFETLVQGPDYHPQLNFAELAAKGGGLTLPYFNGTGTAQKGRPRKRKSPAMGIDIPSYN 246
Query: 688 ------------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ
Sbjct: 247 TGCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQK 306
Query: 736 TGLSKRVTQ 744
TGL+KRV Q
Sbjct: 307 TGLTKRVLQ 315
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTD--SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + TDH D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 248 GCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 307
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 308 GLTKRVLQ 315
>gi|354485100|ref|XP_003504722.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cricetulus
griseus]
gi|118763751|gb|AAI28723.1| Lhx9 protein [Rattus norvegicus]
Length = 321
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
Length = 533
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 84/189 (44%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 118 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 177
Query: 672 HYLELVDGGT----------------------------------TSSDDGADS------- 690
+ L + SD G++S
Sbjct: 178 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 237
Query: 691 ---ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWF
Sbjct: 238 DKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWF 297
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 298 QNKRCKDKK 306
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R
Sbjct: 242 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKR 301
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 302 CKDKKKTIQMKLQMQQEKEGRKLGY 326
>gi|442631924|ref|NP_001261754.1| CG32105, isoform C [Drosophila melanogaster]
gi|440215685|gb|AGB94447.1| CG32105, isoform C [Drosophila melanogaster]
Length = 639
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KCS CC I + V R + V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 327 RLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 386
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 387 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 446
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 447 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 480
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 424 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 480
>gi|6754542|ref|NP_034844.1| LIM/homeobox protein Lhx9 isoform b [Mus musculus]
gi|6179608|emb|CAB59907.1| putative LIM-homeodomain alpha isoform [Mus musculus]
gi|148707590|gb|EDL39537.1| LIM homeobox protein 9, isoform CRA_b [Mus musculus]
Length = 321
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
>gi|391346181|ref|XP_003747357.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Metaseiulus occidentalis]
Length = 434
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 18/157 (11%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS- 671
R FGAKC+ C IA ++ V KA D VYHL+CF C C RQL G+E+ L R+ C+
Sbjct: 112 RLFGAKCAACTGSIAPAELVMKALDQVYHLSCFLCCTCGRQLQRGDEYVLRNGRLYCRQD 171
Query: 672 -----HYLELV-----------DGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQ 715
H L+ + G + GA + + KR RT T Q + +
Sbjct: 172 FEKEMHLLQQLRGGNGGGGVGGAGVPSVGTPGA-GQRPDGRRGPKRPRTILTTAQRRAFK 230
Query: 716 ANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 752
A+F++ P + E +A+ TGLS R+ QVWFQN RA
Sbjct: 231 ASFEISQKPCRKVREALAKETGLSVRIVQVWFQNQRA 267
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 113
KR RT T Q + +A+F++ P + E +A+ TGLS R+ QVWFQN RA
Sbjct: 215 KRPRTILTTAQRRAFKASFEISQKPCRKVREALAKETGLSVRIVQVWFQNQRA 267
>gi|195160505|ref|XP_002021116.1| GL25169 [Drosophila persimilis]
gi|194118229|gb|EDW40272.1| GL25169 [Drosophila persimilis]
Length = 613
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+ CC I + V R ++V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 303 RLFGVKCASCCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 362
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 363 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 422
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 423 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 456
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 400 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 456
>gi|291402698|ref|XP_002717725.1| PREDICTED: LIM homeobox protein 9-like isoform 3 [Oryctolagus
cuniculus]
Length = 321
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDGA------------------ 688
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 689 ---DSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
>gi|119611698|gb|EAW91292.1| LIM homeobox 9, isoform CRA_f [Homo sapiens]
Length = 321
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDGA------------------ 688
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 689 ---DSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
Length = 550
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 85/189 (44%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 112 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 171
Query: 672 HY--LE---------------------------------------LVDGGTTSSDDGADS 690
+ LE + D G+ S +
Sbjct: 172 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 231
Query: 691 E---SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
E S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWF
Sbjct: 232 EKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWF 291
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 292 QNKRCKDKK 300
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R
Sbjct: 236 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKR 295
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 296 CKDKKKTIQMKLQMQQEKEGRKLGY 320
>gi|392927447|ref|NP_001257169.1| Protein TTX-3, isoform b [Caenorhabditis elegans]
gi|211970482|emb|CAR97817.1| Protein TTX-3, isoform b [Caenorhabditis elegans]
Length = 381
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 45/207 (21%)
Query: 605 RLSVLICFRSFGAKCSKCCR----GIASSDWVRKARDHVYHLACFACEACKRQLSTGEEF 660
R V +C + KCCR + D V KA++ ++H ACF C C +L+ G+ +
Sbjct: 125 RDGVFLCRADHAKRYQKCCRKCEIPLNREDMVMKAKEMIFHHACFVCFICGIKLNPGDYY 184
Query: 661 ALH-EDRVLCKSHYLELVDG---------------------------------------G 680
+ + + C +HY +
Sbjct: 185 TMSPQGHLYCHAHYNAVRSTVLCEEAAVATVPAVVAPPPPPPTTTTAPPPAAPEQPPREA 244
Query: 681 TTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLS 739
+T ++ D + + S S ++KR+RT+F QL+ ++ F L+ NPD +DL+++A T L+
Sbjct: 245 STEAEASTDEDGNGSGSQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLT 304
Query: 740 KRVTQVWFQNSRARQKKHLHTGKMKSS 766
KRV QVWFQN+RA+ ++ LH G SS
Sbjct: 305 KRVLQVWFQNARAKYRRELHDGGRSSS 331
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 49 TDSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 107
TD + + S S ++KR+RT+F QL+ ++ F L+ NPD +DL+++A T L+KRV QVW
Sbjct: 252 TDEDGNGSGSQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQVW 311
Query: 108 FQNSRARQKKHLHTGKMKSS 127
FQN+RA+ ++ LH G SS
Sbjct: 312 FQNARAKYRRELHDGGRSSS 331
>gi|344254817|gb|EGW10921.1| LIM/homeobox protein Lhx9 [Cricetulus griseus]
Length = 311
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SHYLELVDG------------------------GTTSSDDGA------------------ 688
+H+ L+ G GT + G
Sbjct: 166 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 225
Query: 689 ---DSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 286 GLTKRVLQ 293
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 226 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 285
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 286 GLTKRVLQ 293
>gi|24663250|ref|NP_729801.1| CG32105, isoform B [Drosophila melanogaster]
gi|23093601|gb|AAF49930.2| CG32105, isoform B [Drosophila melanogaster]
gi|28316896|gb|AAO39470.1| RE70810p [Drosophila melanogaster]
Length = 640
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KCS CC I + V R + V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 328 RLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 387
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 388 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 447
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 448 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 481
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 425 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 481
>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
Length = 529
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 85/189 (44%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HY--LE---------------------------------------LVDGGTTSSDDGADS 690
+ LE + D G+ S +
Sbjct: 170 DHDVLEKSSQSSLTSSSVESNNNISSNNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 229
Query: 691 E---SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
E S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWF
Sbjct: 230 EKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWF 289
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 290 QNKRCKDKK 298
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R
Sbjct: 234 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKR 293
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 294 CKDKKKTIQMKLQMQQEKEGRKLGY 318
>gi|402897927|ref|XP_003911988.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Papio anubis]
Length = 406
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 85/172 (49%), Gaps = 32/172 (18%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE 170
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS---------KAKRVRTTFTEEQ 710
+ D ++ S D +DS + S SK + KR RT +
Sbjct: 171 KEKDLLSSVSPDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTIPSSPX 230
Query: 711 LQVLQANFQLDSNPD------GQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ L A PD GQ E +A TGLS RV QVWFQN RA+ KK
Sbjct: 231 TRHLPAA--APGWPDLIPLSLGQVRETLAAETGLSVRVVQVWFQNQRAKMKK 280
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 22/31 (70%)
Query: 87 GQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
GQ E +A TGLS RV QVWFQN RA+ KK
Sbjct: 250 GQVRETLAAETGLSVRVVQVWFQNQRAKMKK 280
>gi|195440764|ref|XP_002068210.1| GK10148 [Drosophila willistoni]
gi|194164295|gb|EDW79196.1| GK10148 [Drosophila willistoni]
Length = 636
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+ CC I + V R ++V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 323 RLFGVKCAACCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCFR 382
Query: 672 HYLE-----LVDGGTTSSDDGADSES----SHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 383 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 442
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 443 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 476
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 420 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 476
>gi|6180222|emb|CAB59909.1| putative LIM homeodomain protein [Mus musculus]
Length = 299
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 94 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 153
Query: 671 SHYLELVDG------------------------GTTSSDDGA------------------ 688
+H+ L+ G GT + G
Sbjct: 154 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 213
Query: 689 ---DSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 214 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 273
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 274 GLTKRVLQ 281
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 214 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 273
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 274 GLTKRVLQ 281
>gi|195327101|ref|XP_002030260.1| GM25340 [Drosophila sechellia]
gi|194119203|gb|EDW41246.1| GM25340 [Drosophila sechellia]
Length = 637
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KCS CC I + V R + V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 327 RLFGIKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 386
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 387 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 446
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 447 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 480
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 424 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 480
>gi|301605174|ref|XP_002932200.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 331
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + LSTG+ F + E+ V C+
Sbjct: 126 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYCR 185
Query: 671 SHYLELVDG--------------------------------------------------- 679
H+ LV G
Sbjct: 186 IHFELLVQGDFHQQLNYTELSAKGGGIATLPYFSNGTGTVQKGRPRKRKSPALGVDIINY 245
Query: 680 --GTTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G ++ D + ++ S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 246 SSGCNENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 305
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 306 GLTKRVLQ 313
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL
Sbjct: 248 GCNENETDLDRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGL 307
Query: 100 SKRVTQ 105
+KRV Q
Sbjct: 308 TKRVLQ 313
>gi|70909340|ref|NP_001020736.1| LIM/homeobox protein Lhx9 isoform a [Mus musculus]
gi|49119043|gb|AAH72623.1| LIM homeobox protein 9 [Mus musculus]
Length = 330
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 185 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 244
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 305 GLTKRVLQ 312
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 305 GLTKRVLQ 312
>gi|327291552|ref|XP_003230485.1| PREDICTED: LIM/homeobox protein Lhx6-like [Anolis carolinensis]
Length = 190
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 55/84 (65%)
Query: 674 LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L + G + + SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A
Sbjct: 21 LPFLSGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLA 80
Query: 734 QITGLSKRVTQVWFQNSRARQKKH 757
+TGLS+RV QVWFQN RAR KKH
Sbjct: 81 DMTGLSRRVIQVWFQNCRARHKKH 104
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 52/79 (65%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TGL
Sbjct: 26 GNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGL 85
Query: 100 SKRVTQVWFQNSRARQKKH 118
S+RV QVWFQN RAR KKH
Sbjct: 86 SRRVIQVWFQNCRARHKKH 104
>gi|432882277|ref|XP_004073955.1| PREDICTED: uncharacterized protein LOC101155206 [Oryzias latipes]
Length = 553
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 33/176 (18%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLE 675
G +C++C + I S V ++ D +H CF+C+ C +L G + + + C+SHY E
Sbjct: 101 GGRCARCFQPIPPSALVMRSGDLTFHPQCFSCQECDVKLLPGNLYCMQGANLYCESHYQE 160
Query: 676 LVDGGTTS-------------------SDDGADSESSHSKSKAKRVR------------T 704
DGG+ S S +G DS SS + T
Sbjct: 161 --DGGSVSHHDPSMRLSLSEEPGQNHVSGEGEDSVSSPEPRLDDKAGGGRSRRRSKRIRT 218
Query: 705 TFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 760
F EQL+ L++ F NPDG+D +A TGL KRV QVWFQN+RA+ ++ L++
Sbjct: 219 CFRREQLRALESYFAQKHNPDGKDWTCLAHKTGLPKRVLQVWFQNARAKLRRSLNS 274
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 65 TTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
T F EQL+ L++ F NPDG+D +A TGL KRV QVWFQN+RA+ ++ L++
Sbjct: 218 TCFRREQLRALESYFAQKHNPDGKDWTCLAHKTGLPKRVLQVWFQNARAKLRRSLNS 274
>gi|62955397|ref|NP_001017710.1| LIM/homeobox protein Lhx9 isoform 1 [Danio rerio]
gi|62205415|gb|AAH93258.1| LIM homeobox 9 [Danio rerio]
Length = 330
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 184
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
H+ L+ G GT + G
Sbjct: 185 VHFETLIQGEYHPQLNYAELAAKGGGLALPYFNGTGTVQKGRPRKRKSPAMGIDIGSYSS 244
Query: 688 -----------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 245 GCNENDADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 304
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 305 GLTKRVLQ 312
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 31 NFQLDSNPDGFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQ 88
+ S G + DH D + K KR+RT+F QL+ +++ F ++ NPD +
Sbjct: 236 GIDIGSYSSGCNENDADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAK 295
Query: 89 DLERIAQITGLSKRVTQ 105
DL+++AQ TGL+KRV Q
Sbjct: 296 DLKQLAQKTGLTKRVLQ 312
>gi|194747127|ref|XP_001956004.1| GF24815 [Drosophila ananassae]
gi|190623286|gb|EDV38810.1| GF24815 [Drosophila ananassae]
Length = 613
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+ CC I + V R + V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 302 RLFGVKCASCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFLLRDGQLFCYR 361
Query: 672 HYLE-----LVDGGTTSSDDGADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H LE G D E + KR RT T +Q + +A+F
Sbjct: 362 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 421
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 422 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 455
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 399 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 455
>gi|124111083|gb|ABM91915.1| LHX6 [Pan troglodytes]
Length = 198
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 53/67 (79%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVD 678
HY +++
Sbjct: 184 HYDTMIE 190
>gi|121483796|gb|ABM54189.1| LHX6 [Pan paniscus]
gi|124054101|gb|ABM89234.1| LHX6 [Pongo pygmaeus]
Length = 198
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 53/67 (79%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVD 678
HY +++
Sbjct: 184 HYDTMIE 190
>gi|291237424|ref|XP_002738638.1| PREDICTED: Lim homeobox transcription factor [Saccoglossus
kowalevskii]
Length = 441
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 37/179 (20%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
FG KC+ C + I S++ V +A +VYHL CF C C ++L G+EF + ++++ CK Y
Sbjct: 96 FGTKCNGCLQSITSNELVMRALCNVYHLRCFNCIICNQRLQKGDEFVVRDNQLFCKVDYE 155
Query: 674 -------------------LELVDGG--------TTSSDDGADSESSHSKSKA------- 699
+++D G T + G DS+++ + +K
Sbjct: 156 KEYGSVQLSSPQGHHSEDDSDVIDEGYLDNSVSNTMDDNSGNDSDTNSTDTKGNGGDGRK 215
Query: 700 --KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T Q + + +F++ P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 216 GPKRPRTILTTAQRRAFKQSFEVSQKPCRKVRESLAADTGLSVRVVQVWFQNQRAKMKK 274
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 39 DGFGADS-TDHTDSESSHSKSK--AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 95
D G DS T+ TD++ + + KR RT T Q + + +F++ P + E +A
Sbjct: 193 DNSGNDSDTNSTDTKGNGGDGRKGPKRPRTILTTAQRRAFKQSFEVSQKPCRKVRESLAA 252
Query: 96 ITGLSKRVTQVWFQNSRARQKK 117
TGLS RV QVWFQN RA+ KK
Sbjct: 253 DTGLSVRVVQVWFQNQRAKMKK 274
>gi|124013499|gb|ABM87992.1| LHX6 [Macaca nemestrina]
Length = 198
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 53/67 (79%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVD 678
HY +++
Sbjct: 184 HYDTMIE 190
>gi|268580707|ref|XP_002645336.1| C. briggsae CBR-TTX-3 protein [Caenorhabditis briggsae]
Length = 461
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 43/186 (23%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALH-EDRVLCKSHY---- 673
C KC + + D V +A++ +YH +CF C C ++L+TG+ + + E + C++HY
Sbjct: 222 CRKCEQPLNREDMVMRAKEMIYHNSCFVCFLCTKKLNTGDFYTVSPEGHLYCQAHYAVPT 281
Query: 674 ---LE-----------------------LVDGGTTSSDDGADSESSHSKS---------- 697
LE L T+ + + E+S +++
Sbjct: 282 QVLLEEPKSTTVSAVASPPKTTPPTAVILPLSSTSPAPEAPARETSEAEASTDEDGSSNG 341
Query: 698 --KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
+ KR+RT+F QL+ +++ F L+ NPD +DL+++A T L+KRV QVWFQN+RA+ +
Sbjct: 342 HQRNKRMRTSFKHHQLRAMKSYFALNHNPDAKDLKQLAVKTNLTKRVLQVWFQNARAKFR 401
Query: 756 KHLHTG 761
+ L G
Sbjct: 402 RGLQDG 407
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 104
STD S + H ++K R+RT+F QL+ +++ F L+ NPD +DL+++A T L+KRV
Sbjct: 332 STDEDGSSNGHQRNK--RMRTSFKHHQLRAMKSYFALNHNPDAKDLKQLAVKTNLTKRVL 389
Query: 105 QVWFQNSRARQKKHLHTG 122
QVWFQN+RA+ ++ L G
Sbjct: 390 QVWFQNARAKFRRGLQDG 407
>gi|122934839|gb|ABM68157.1| LHX6 [Lagothrix lagotricha]
Length = 198
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 53/67 (79%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVD 678
HY +++
Sbjct: 184 HYDTMIE 190
>gi|444723048|gb|ELW63713.1| LIM/homeobox protein Lhx5 [Tupaia chinensis]
Length = 610
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 89/186 (47%), Gaps = 42/186 (22%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKS 671
R FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 168 RRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKD 227
Query: 672 HYL---------------------------------ELVDGGTTSSDDGADSESSHSKSK 698
YL + D T+S + A++E+ S
Sbjct: 228 DYLSSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSG 287
Query: 699 AKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ-----ITGLSKRV-TQVWFQNS 750
KR RTT +QL+ L+A F P ++AQ L V +QVWFQN
Sbjct: 288 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIRAQLAQXKAPLTPSLQPCVLSQVWFQNR 347
Query: 751 RARQKK 756
R+++++
Sbjct: 348 RSKERR 353
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL 674
YL
Sbjct: 117 DDYL 120
>gi|126306415|ref|XP_001367775.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Monodelphis
domestica]
gi|395531045|ref|XP_003767593.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Sarcophilus
harrisii]
Length = 321
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 296 GLTKRVLQ 303
>gi|326924942|ref|XP_003208681.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Meleagris
gallopavo]
Length = 271
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 66 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 125
Query: 671 SHYLELVDG------------------------GTTSSDDGA------------------ 688
+H+ L+ G GT + G
Sbjct: 126 AHFESLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 185
Query: 689 ---DSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 186 GCNENEADHMDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 245
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 246 GLTKRVLQ 253
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 186 GCNENEADHMDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 245
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 246 GLTKRVLQ 253
>gi|348536385|ref|XP_003455677.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Oreochromis
niloticus]
Length = 320
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 55/182 (30%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+ H+ LV
Sbjct: 133 RCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDSLVYCRLHFETLV 192
Query: 678 DG-------------------------GTTSSDDG------------------------- 687
G GT ++ G
Sbjct: 193 QGPDYHPQLNFAELAAKGGGLTLPYFNGTGTAQKGRPRKRKSPAMGIDIPSYNTGCNEND 252
Query: 688 -----ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRV 742
D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV
Sbjct: 253 TDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRV 312
Query: 743 TQ 744
Q
Sbjct: 313 LQ 314
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 40 GFGADSTDHTD--SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + TDH D ++ K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 247 GCNENDTDHLDRDQQAYPPTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 306
Query: 98 GLSKRVTQ 105
GL+KRV Q
Sbjct: 307 GLTKRVLQ 314
>gi|195126146|ref|XP_002007535.1| GI13003 [Drosophila mojavensis]
gi|193919144|gb|EDW18011.1| GI13003 [Drosophila mojavensis]
Length = 607
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC+ CC I + V R ++V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 297 RLFGVKCAGCCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 356
Query: 672 HYL--ELVDGGTTSSDDG---ADSE----SSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
H L E+ + G D E + KR RT T +Q + +A+F
Sbjct: 357 HDLDKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 416
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 417 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 450
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 394 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 450
>gi|355753054|gb|EHH57100.1| hypothetical protein EGM_06670 [Macaca fascicularis]
Length = 363
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 69/154 (44%), Gaps = 8/154 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + LACF C +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNACPLACFPCFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVDGGTTSSDDG--------ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
HY +++ ++++G SE A
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAXXXXXXXXXXXXXXXXXXXXXXXX 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
VWFQN RAR KKH
Sbjct: 244 XXXXXXXXXXXXXXXXXXXXXVWFQNCRARHKKH 277
>gi|242007294|ref|XP_002424476.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
gi|212507894|gb|EEB11738.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
Length = 389
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 77/150 (51%), Gaps = 8/150 (5%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KCS+C I + V +A+ V+HL CF C AC + L GE+F L ++ C+
Sbjct: 82 RIFGVKCSRCGDRILPHELVMRAQHLVFHLQCFCCIACGQHLQKGEQFVLKAGQLFCRPD 141
Query: 673 Y------LELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 726
+ L G DDG + KR RT T Q + +A+F++ P
Sbjct: 142 FEKEIYLLHSPTGEDLDLDDGI--RHRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCR 199
Query: 727 QDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 200 KVREALAKETGLSVRVVQVWFQNQRAKVKK 229
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 173 KRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRAKVKK 229
>gi|312074868|ref|XP_003140163.1| Lhx2 protein [Loa loa]
gi|307764674|gb|EFO23908.1| Lhx2 protein [Loa loa]
Length = 372
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 35/178 (19%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHY 673
+G +C +C + D V + + ++HL CF C C L E F + + L C H+
Sbjct: 94 YGKRCERCAAILCDEDIVMRVNEAIFHLECFTCYVCSAPLRPSELFMMGCNGTLYCHVHF 153
Query: 674 -----------LELVDGG-----------------------TTSSDDGADSESSHSKSKA 699
L D TT S D + E+ + K+
Sbjct: 154 GAINITSDDSSLRTTDSSEISVLRGKERCRKWKKSTDDIESTTDSIDCIEEETLNITHKS 213
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
KR+RT+F QL+ +++ F L+ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 214 KRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQVWFQNARAKFRRN 271
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 56/76 (73%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
DS D + E+ + K+KR+RT+F QL+ +++ F L+ NPD +DL+++AQ TGL+KR
Sbjct: 196 TDSIDCIEEETLNITHKSKRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKR 255
Query: 103 VTQVWFQNSRARQKKH 118
V QVWFQN+RA+ +++
Sbjct: 256 VLQVWFQNARAKFRRN 271
>gi|124377602|dbj|BAF46218.1| LIM homeobox gene 9 gamma protein [Glandirana rugosa]
Length = 331
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + LSTG+ F + E+ V +
Sbjct: 107 YRRFSVQRCARCHLGISASEIVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYRR 166
Query: 671 SHYLELVDG--------------------------------------------------- 679
+H+ LV G
Sbjct: 167 AHFELLVQGDFHSQLNYTELSAKGGGLSALPYFTNGTGAVQKGRPRKRKSPALGVDIINY 226
Query: 680 --GTTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G +D D + S+ S K KR+RT+F QL+ +++ F ++ NPD +DL ++AQ T
Sbjct: 227 TSGCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLRQLAQKT 286
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 287 GLTKRVLQ 294
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD +S K KR+RT+F QL+ +++ F ++ NPD +DL ++AQ TGL
Sbjct: 229 GCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLRQLAQKTGL 288
Query: 100 SKRVTQ 105
+KRV Q
Sbjct: 289 TKRVLQ 294
>gi|308489722|ref|XP_003107054.1| CRE-LIM-6 protein [Caenorhabditis remanei]
gi|308252942|gb|EFO96894.1| CRE-LIM-6 protein [Caenorhabditis remanei]
Length = 314
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG +C +C ++ +D V + YH CF+C +C+ + G+E+ + + V C++ Y
Sbjct: 99 FGKRCRRCMILLSPTDIVHRVHYMYYHAQCFSCCSCQGPFNLGDEYHVFDSEVFCRNDYQ 158
Query: 675 ELVDGGTTSSDDGADS-ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+ + GTTS D S H + KR RT +Q + + F+ S P + E++A
Sbjct: 159 AICNFGTTSESMLEDVVRSEHHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLA 218
Query: 734 QITGLSKRVTQVWFQNSRARQKK 756
TGLS RV QVWFQN RA+ KK
Sbjct: 219 NETGLSVRVVQVWFQNQRAKIKK 241
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S H + KR RT +Q + + F+ S P + E++A TGLS RV QVWFQN R
Sbjct: 177 SEHHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 236
Query: 113 ARQKK 117
A+ KK
Sbjct: 237 AKIKK 241
>gi|397568126|gb|EJK45967.1| hypothetical protein THAOC_35390 [Thalassiosira oceanica]
Length = 191
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 392 KGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMASYA-------------W 438
K LP CDGCG +V HAL CK GGLV HD RDE +AS A +
Sbjct: 6 KNLPKTCDGCGATFTVEHALTCKTGGLVVMRHDDCRDEFGDIASKATTPSRVTTEPLIHY 65
Query: 439 NGIVKEPIMRDSSSTSPALI------------ADFKINGVWEAGGTAFFDNRIVNADAPS 486
G EP+ R ++ S D I+G + TA D I + DAPS
Sbjct: 66 GG--NEPVTRQANGASNTSNNNNSSTRGGEERGDLAIHGFVQRSKTAILDFVITDTDAPS 123
Query: 487 YSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHLEFHSFLKRIALVLSE 546
Y Q + ++ A+ K KY A + R F P+ S DG E + KR+A +L+
Sbjct: 124 YGHQPSKKVLEKAAKRKKDKYLEACRERRRDFIPMAYSVDGLAGKEARAAEKRLASLLAS 183
Query: 547 KWKKMY 552
KW + Y
Sbjct: 184 KWDRPY 189
>gi|195484275|ref|XP_002090625.1| GE12696 [Drosophila yakuba]
gi|194176726|gb|EDW90337.1| GE12696 [Drosophila yakuba]
Length = 540
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 84/189 (44%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HY--LE---------------------------------------LVDGGTTSSDDGADS 690
+ LE + D G+ S +
Sbjct: 170 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 229
Query: 691 E---SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
E S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWF
Sbjct: 230 EKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWF 289
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 290 QNKRCKDKK 298
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 234 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKR 293
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 294 CKDKKKTIQMKLQMQQEKEGRKLGY 318
>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
Length = 539
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 84/189 (44%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 108 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 167
Query: 672 HY--LE---------------------------------------LVDGGTTSSDDGADS 690
+ LE + D G+ S +
Sbjct: 168 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 227
Query: 691 E---SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
E S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWF
Sbjct: 228 EKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWF 287
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 288 QNKRCKDKK 296
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 232 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKR 291
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 292 CKDKKKTIQMKLQMQQEKEGRKLGY 316
>gi|307204532|gb|EFN83212.1| LIM homeobox transcription factor 1 beta [Harpegnathos saltator]
Length = 402
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KC++C I+ SD V + V+H+ CF C C + L G F L + + +C+ +
Sbjct: 114 FGVKCARCMEKISCSDLVMRVASLVFHVECFMCCMCGQPLPRGAHFILRQGQPICRRDFE 173
Query: 675 ELVDGGTTSSDDGAD-SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+ + DD D + + KR RT T Q + +A+F++ P + E +A
Sbjct: 174 HELYLNSPQDDDLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALA 233
Query: 734 QITGLSKRVTQVWFQNSRARQKK 756
+ TGLS RV QVWFQN RA+ KK
Sbjct: 234 KDTGLSVRVVQVWFQNQRAKMKK 256
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 200 KRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 256
>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
Length = 534
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HYLELVDGGT----------------------------------TSSDDGADS------- 690
+ L + SD G++S
Sbjct: 170 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 229
Query: 691 ---ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWF
Sbjct: 230 DKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWF 289
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 290 QNKRCKDKK 298
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 234 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKR 293
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 294 CKDKKKTIQMKLQMQQEKEGRKLGY 318
>gi|258504145|gb|ACV72772.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG +C +C ++ +D V + YH CF+C +C+ + G+E+ + + V C++ Y
Sbjct: 66 FGKRCRRCMILLSPTDIVHRVHYMYYHAQCFSCCSCQGPFNLGDEYHVFDSEVFCRNDYQ 125
Query: 675 ELVDGGTTSSDDGADS-ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+ + GTTS D S H + KR RT +Q + + F+ S P + E++A
Sbjct: 126 AICNFGTTSESMLEDVVRSEHHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLA 185
Query: 734 QITGLSKRVTQVWFQNSRARQKK 756
TGLS RV QVWFQN RA+ KK
Sbjct: 186 NETGLSVRVVQVWFQNQRAKIKK 208
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S H + KR RT +Q + + F+ S P + E++A TGLS RV QVWFQN R
Sbjct: 144 SEHHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 203
Query: 113 ARQKK 117
A+ KK
Sbjct: 204 AKIKK 208
>gi|432856535|ref|XP_004068463.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 348
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F C C I+ S+ V +A V+HL+CF C C L TG+ L + R+LC
Sbjct: 71 FAVHCGGCAEAISPSELVMRAGAAVFHLSCFTCSVCFHHLKTGDRCILQDGRLLCAREDY 130
Query: 675 ELVDGGTTSSDDG--ADSESSHSKSKA---------------KRVRTTFTEEQLQVLQAN 717
+ SSD G D E +K KR RT T +Q + +A+
Sbjct: 131 HQLQASPPSSDIGKSGDDEEEEPSAKVMDKPGRSHDQENKRPKRPRTILTTQQRRTFKAS 190
Query: 718 FQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 191 FEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 229
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 171 RPKRPRTILTTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 229
>gi|1895062|gb|AAB49892.1| LIM homeobox protein [Drosophila melanogaster]
Length = 534
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HYLELVDGGT----------------------------------TSSDDGADS------- 690
+ L + SD G++S
Sbjct: 170 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 229
Query: 691 ---ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWF
Sbjct: 230 DKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWF 289
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 290 QNKRCKDKK 298
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 234 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKR 293
Query: 113 ARQKK 117
+ KK
Sbjct: 294 CKDKK 298
>gi|258504135|gb|ACV72767.1| LIM-6 [Caenorhabditis remanei]
gi|258504137|gb|ACV72768.1| LIM-6 [Caenorhabditis remanei]
gi|258504139|gb|ACV72769.1| LIM-6 [Caenorhabditis remanei]
gi|258504141|gb|ACV72770.1| LIM-6 [Caenorhabditis remanei]
gi|258504143|gb|ACV72771.1| LIM-6 [Caenorhabditis remanei]
gi|258504147|gb|ACV72773.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG +C +C ++ +D V + YH CF+C +C+ + G+E+ + + V C++ Y
Sbjct: 66 FGKRCRRCMILLSPTDIVHRVHYMYYHAQCFSCCSCQGPFNLGDEYHVFDSEVFCRNDYQ 125
Query: 675 ELVDGGTTSSDDGADS-ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+ + GTTS D S H + KR RT +Q + + F+ S P + E++A
Sbjct: 126 AICNFGTTSESMLEDVVRSEHHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLA 185
Query: 734 QITGLSKRVTQVWFQNSRARQKK 756
TGLS RV QVWFQN RA+ KK
Sbjct: 186 NETGLSVRVVQVWFQNQRAKIKK 208
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S H + KR RT +Q + + F+ S P + E++A TGLS RV QVWFQN R
Sbjct: 144 SEHHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 203
Query: 113 ARQKK 117
A+ KK
Sbjct: 204 AKIKK 208
>gi|124377600|dbj|BAF46217.1| LIM homeobox gene 9 beta protein [Glandirana rugosa]
Length = 347
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + LSTG+ F + E+ V +
Sbjct: 107 YRRFSVQRCARCHLGISASEIVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYRR 166
Query: 671 SHYLELVDG--------------------------------------------------- 679
+H+ LV G
Sbjct: 167 AHFELLVQGDFHSQLNYTELSAKGGGLSALPYFTNGTGAVQKGRPRKRKSPALGVDIINY 226
Query: 680 --GTTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G +D D + S+ S K KR+RT+F QL+ ++ F ++ NPD +DL+++AQ T
Sbjct: 227 TSGCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKT 286
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 287 GLTKRVLQ 294
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD +S K KR+RT+F QL+ ++ F ++ NPD +DL+++AQ TGL
Sbjct: 229 GCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTGL 288
Query: 100 SKRVTQ 105
+KRV Q
Sbjct: 289 TKRVLQ 294
>gi|432868110|ref|XP_004071416.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 398
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 18/160 (11%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C + I S+ + + VYHL CF+C C+R+L G+EF L E ++LC+ Y
Sbjct: 110 FVRKCSACLQVIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRMDYE 169
Query: 674 -----LELVDGGTTSS------------DDGADSESSHSKSKAKRVRTTFTEEQLQVLQA 716
L + T S G + S ++KR RT T +Q + +A
Sbjct: 170 KEREMLAAISPTPTESVKSEDEDGGGGSGSGKGGDESKEHKRSKRPRTILTTQQRRAFKA 229
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+F++ + P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 230 SFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 269
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
++KR RT T +Q + +A+F++ + P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 211 RSKRPRTILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 269
>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
Length = 534
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HYLELVDGGT----------------------------------TSSDDGADS------- 690
+ L + SD G++S
Sbjct: 170 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 229
Query: 691 ---ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWF
Sbjct: 230 DKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWF 289
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 290 QNKRCKDKK 298
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 234 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKR 293
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 294 CKDKKKTIQMKLQMQQEKEGRKLGY 318
>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
Length = 534
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HYLELVDGGT----------------------------------TSSDDGADS------- 690
+ L + SD G++S
Sbjct: 170 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 229
Query: 691 ---ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWF
Sbjct: 230 DKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWF 289
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 290 QNKRCKDKK 298
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 234 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKR 293
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 294 CKDKKKTIQMKLQMQQEKEGRKLGY 318
>gi|258504133|gb|ACV72766.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG +C +C ++ +D V + YH CF+C +C+ + G+E+ + + V C++ Y
Sbjct: 66 FGKRCRRCMILLSPTDIVHRVHYMYYHAQCFSCCSCQGPFNLGDEYHVFDSEVFCRNDYQ 125
Query: 675 ELVDGGTTSSDDGADS-ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+ + GTTS D S H + KR RT +Q + + F+ S P + E++A
Sbjct: 126 AICNFGTTSESMLEDVVRSEHHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLA 185
Query: 734 QITGLSKRVTQVWFQNSRARQKK 756
TGLS RV QVWFQN RA+ KK
Sbjct: 186 NETGLSVRVVQVWFQNQRAKIKK 208
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S H + KR RT +Q + + F+ S P + E++A TGLS RV QVWFQN R
Sbjct: 144 SEHHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQR 203
Query: 113 ARQKK 117
A+ KK
Sbjct: 204 AKIKK 208
>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 84/189 (44%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HY--LE---------------------------------------LVDGGTTSSDDGADS 690
+ LE + D G+ S +
Sbjct: 170 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 229
Query: 691 E---SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
E S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWF
Sbjct: 230 EKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWF 289
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 290 QNKRCKDKK 298
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 234 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKR 293
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 294 CKDKKKTIQMKLQMQQEKEGRKLGY 318
>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
Length = 550
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 84/189 (44%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HY--LE---------------------------------------LVDGGTTSSDDGADS 690
+ LE + D G+ S +
Sbjct: 170 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 229
Query: 691 E---SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
E S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWF
Sbjct: 230 EKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWF 289
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 290 QNKRCKDKK 298
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 234 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKR 293
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 294 CKDKKKTIQMKLQMQQEKEGRKLGY 318
>gi|348508944|ref|XP_003442012.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 368
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 18/160 (11%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY- 673
F KCS C + I S+ + + VYHL CF+C C+R+L G+EF L E ++LC+ Y
Sbjct: 86 FVRKCSACLQVIGRSELIMRVLGQVYHLGCFSCCECERRLQRGDEFVLKEGQLLCRMDYE 145
Query: 674 -----LELVDGGTTSS------------DDGADSESSHSKSKAKRVRTTFTEEQLQVLQA 716
L + T S G + ++KR RT T +Q + +A
Sbjct: 146 KEREMLAAISPTPTESVKSEDEDGGGGSGGGKGGDEGKEHKRSKRPRTILTTQQRRAFKA 205
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+F++ + P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 206 SFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 245
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
++KR RT T +Q + +A+F++ + P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 187 RSKRPRTILTTQQRRAFKASFEVSAKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 245
>gi|308464503|ref|XP_003094518.1| CRE-TTX-3 protein [Caenorhabditis remanei]
gi|308247319|gb|EFO91271.1| CRE-TTX-3 protein [Caenorhabditis remanei]
Length = 460
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 58/208 (27%)
Query: 608 VLICFRSFGAKCSKCCR----GIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALH 663
V+ C + KCCR + D + KA++ ++H ACF C C +L+TG+ + +
Sbjct: 207 VVYCHDDHAKRYRKCCRKCELPLKREDMIMKAKEMIFHHACFVCFICGTKLNTGDYYTMS 266
Query: 664 ED-RVLCKSHYLEL---------------------------------------------- 676
+ C +HY +
Sbjct: 267 PSGHLYCHAHYDVIRTSALCDEPTPPVVVAAPLSPPKTTPPPVVKKEATPAPPAAEKPAR 326
Query: 677 ---VDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
+G ++ +DG++ S ++KR+RT+F QL+ ++ F L+ NPD +DL+++A
Sbjct: 327 EPSTEGEASTDEDGSNG----SNQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLA 382
Query: 734 QITGLSKRVTQVWFQNSRARQKKHLHTG 761
T L+KRV QVWFQN+RA+ ++ L G
Sbjct: 383 AKTNLTKRVLQVWFQNARAKYRRGLQDG 410
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 38 PDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
P G STD S S+ +SK R+RT+F QL+ ++ F L+ NPD +DL+++A T
Sbjct: 328 PSTEGEASTDEDGSNGSNQRSK--RMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKT 385
Query: 98 GLSKRVTQVWFQNSRARQKKHLHTG 122
L+KRV QVWFQN+RA+ ++ L G
Sbjct: 386 NLTKRVLQVWFQNARAKYRRGLQDG 410
>gi|334191693|ref|NP_001229264.1| LIM/homeobox protein Lhx6 isoform 5 [Homo sapiens]
Length = 176
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 54/80 (67%)
Query: 678 DGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 737
+G + + SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 11 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 70
Query: 738 LSKRVTQVWFQNSRARQKKH 757
LS+RV QVWFQN RAR KKH
Sbjct: 71 LSRRVIQVWFQNCRARHKKH 90
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 53/80 (66%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
+G G SE AKR RT+FT EQLQV+QA F D+NPD Q L+++A +TG
Sbjct: 11 NGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTG 70
Query: 99 LSKRVTQVWFQNSRARQKKH 118
LS+RV QVWFQN RAR KKH
Sbjct: 71 LSRRVIQVWFQNCRARHKKH 90
>gi|344240688|gb|EGV96791.1| Insulin gene enhancer protein ISL-1 [Cricetulus griseus]
Length = 257
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 76/146 (52%), Gaps = 24/146 (16%)
Query: 634 KARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVDGGTTSSDD------- 686
+AR VYH+ CF C AC RQL G+EFAL ED + C++ + ++V+ + + D
Sbjct: 2 RARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH-DVVERASLGAGDPLSPLHP 60
Query: 687 ------GADSESSHSKS----------KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
A+ S+ + K RVRT E+QL L+ + + PD E
Sbjct: 61 ARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKE 120
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++ ++TGLS RV +VWFQN R + KK
Sbjct: 121 QLVEMTGLSPRVIRVWFQNKRCKDKK 146
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 88 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 146
>gi|124377604|dbj|BAF46219.1| LIM homeobox gene 9 delta protein [Glandirana rugosa]
Length = 312
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + LSTG+ F + E+ V +
Sbjct: 107 YRRFSVQRCARCHLGISASEIVMRARESVYHLSCFTCTXCNKTLSTGDHFGMKENLVYRR 166
Query: 671 SHYLELVDG--------------------------------------------------- 679
+H+ LV G
Sbjct: 167 AHFELLVQGDFHSQLNYTELSAKGGGLSALPYFTNGTGAVQKGRPRKRKSPALGVDIINY 226
Query: 680 --GTTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G +D D + S+ S K KR+RT+F QL+ ++ F ++ NPD +DL+++AQ T
Sbjct: 227 TSGCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKT 286
Query: 737 GLSKRVTQ 744
GL+KRV Q
Sbjct: 287 GLTKRVLQ 294
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD +S K KR+RT+F QL+ ++ F ++ NPD +DL+++AQ TGL
Sbjct: 229 GCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTGL 288
Query: 100 SKRVTQ 105
+KRV Q
Sbjct: 289 TKRVLQ 294
>gi|17136566|ref|NP_476774.1| tailup, isoform B [Drosophila melanogaster]
gi|5052638|gb|AAD38649.1|AF145674_1 tailup [Drosophila melanogaster]
gi|22946785|gb|AAN11018.1| tailup, isoform B [Drosophila melanogaster]
gi|220942306|gb|ACL83696.1| tup-PB [synthetic construct]
gi|220952524|gb|ACL88805.1| tup-PB [synthetic construct]
Length = 465
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 83/189 (43%), Gaps = 45/189 (23%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HYLELVDGGT----------------------------------TSSDDGADS------- 690
+ L + SD G++S
Sbjct: 170 DHDVLEKSSQSSLTSSSVESNNNISSSNNNNTNLSNNNHSSELGSMSDSGSESGSHKSIR 229
Query: 691 ---ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWF
Sbjct: 230 DKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWF 289
Query: 748 QNSRARQKK 756
QN R + KK
Sbjct: 290 QNKRCKDKK 298
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S S K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 234 SGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKR 293
Query: 113 ARQKKHLHTGKMKSSQNRP--KYGY 135
+ KK K++ Q + K GY
Sbjct: 294 CKDKKKTIQMKLQMQQEKEGRKLGY 318
>gi|4809142|gb|AAD30110.1|AF134761_1 LIM-homeodomain type transcription factor Lhx9 [Mus musculus]
Length = 300
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 55/185 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELVDG------------------------GTTSSDDG------------------- 687
+H+ L+ G GT + G
Sbjct: 176 AHFETLLQGEYPPQLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRKSPALGVDIVNYNS 235
Query: 688 --ADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
++E+ H K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 737 GLSKR 741
GL+KR
Sbjct: 296 GLTKR 300
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 40 GFGADSTDHTDSESSH--SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 97
G + DH D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ T
Sbjct: 236 GCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKT 295
Query: 98 GLSKR 102
GL+KR
Sbjct: 296 GLTKR 300
>gi|357612982|gb|EHJ68260.1| hypothetical protein KGM_10626 [Danaus plexippus]
Length = 327
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C + + V +A+ +V+H+ CF C C + L GE++ + ++ C+
Sbjct: 41 RLFGVKCTRCGDRLLPQEMVMRAQQYVFHIQCFVCVMCCQPLQKGEQYVIRAGQIFCRQD 100
Query: 673 YLELVDGGTTSSDDGA--DSESSHSKSKA-KRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
+ + + + DD DSE + KR RT T Q + +A+F++ P +
Sbjct: 101 FEKEMYLMQHAEDDMIIDDSERPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVR 160
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK 756
E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 161 EALAKDTGLSVRVVQVWFQNQRAKMKK 187
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 130 PKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 187
>gi|307189897|gb|EFN74141.1| LIM homeobox transcription factor 1 beta [Camponotus floridanus]
Length = 402
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC++C I+ SD V R V+H+ CFAC C + L G + L + + +C+
Sbjct: 111 RIFGVKCARCMEKISCSDLVMRPVSGLVFHVECFACCMCGQPLPRGAHYILRQGQPICRR 170
Query: 672 HYLELVDGGTTSSDDGAD-SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ + + DD D + + KR RT T Q + +A+F++ P + E
Sbjct: 171 DFEHELFLNSPQDDDLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVRE 230
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+A+ TGLS RV QVWFQN RA+ KK
Sbjct: 231 ALAKDTGLSVRVVQVWFQNQRAKMKK 256
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 199 PKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 256
>gi|13509267|emb|CAC35214.1| Lhx9 protein [Xenopus laevis]
Length = 217
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 55/186 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + LSTG+ F + E+ V C+
Sbjct: 32 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYCR 91
Query: 671 SHYLELVDG--------------------------------------------------- 679
H+ LV G
Sbjct: 92 IHFELLVQGDFHQQLNYSELSAKGGGLAALPYFSNGTGTVQKGRPRKRKSQALGVDIINY 151
Query: 680 --GTTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G ++ D + ++ S K+KR+RT+F QL+ +++ F ++ NPD + L+++AQ T
Sbjct: 152 SSGCNENETDLDRDQTYPPSQKSKRMRTSFKHNQLRTMKSYFAINHNPDAKGLKQLAQKT 211
Query: 737 GLSKRV 742
GL+KRV
Sbjct: 212 GLTKRV 217
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD ++ K+KR+RT+F QL+ +++ F ++ NPD + L+++AQ TGL
Sbjct: 154 GCNENETDLDRDQTYPPSQKSKRMRTSFKHNQLRTMKSYFAINHNPDAKGLKQLAQKTGL 213
Query: 100 SKRV 103
+KRV
Sbjct: 214 TKRV 217
>gi|170032119|ref|XP_001843930.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871879|gb|EDS35262.1| lim homeobox protein [Culex quinquefasciatus]
Length = 400
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 31/171 (18%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK------- 670
+C C IA ++ V +A++HV+HL CF C C R L GE F+L +++C+
Sbjct: 94 ECYGCGERIAPNEMVMRAKNHVFHLNCFLCYTCNRPLQKGEPFSLKSGKLICQHDLEKDM 153
Query: 671 --------SHYL-----ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQAN 717
SH+L L++ G S D + KR RT T Q + +A+
Sbjct: 154 YSSLHPIHSHHLYGDDDYLMEDGLRSRD---------GRRGPKRPRTILTSAQRRQFKAS 204
Query: 718 FQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQN 768
F + P + E +A+ TGLS RV QVWFQN RA+ KK + K KS+QN
Sbjct: 205 FDVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK--ISRKSKSNQN 253
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
KR RT T Q + +A+F + P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 187 KRPRTILTSAQRRQFKASFDVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK--I 244
Query: 121 TGKMKSSQN 129
+ K KS+QN
Sbjct: 245 SRKSKSNQN 253
>gi|391759011|dbj|BAM22649.1| LIM homeobox 3/4, partial [Eptatretus burgeri]
Length = 205
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 74/134 (55%), Gaps = 13/134 (9%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR FG KC+ C +GI S VRKA++ V+HL CFAC C RQL+TG+ F L +D R++C+
Sbjct: 84 FRRFGTKCAGCRQGIPPSQAVRKAQERVFHLHCFACSLCGRQLATGDLFYLLDDARLVCQ 143
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y GT D D AKR RTT T +QL+ L+ ++ P E
Sbjct: 144 HDY-----PGTAHRDSEVD-------GAAKRPRTTITAKQLETLKNAYKSSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQ 744
++A TGL RV Q
Sbjct: 192 QLASETGLDMRVVQ 205
>gi|332025158|gb|EGI65338.1| LIM homeobox transcription factor 1-beta [Acromyrmex echinatior]
Length = 400
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KC++C I+ SD V R ++H+ CFAC C + L G + L + + +C+
Sbjct: 109 RIFGVKCARCMEKISCSDLVMRPVSGLIFHVECFACCMCGQPLPRGAHYILRQGQPICRR 168
Query: 672 HYLELVDGGTTSSDDGAD-SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ + + DD D + + KR RT T Q + +A+F++ P + E
Sbjct: 169 DFEHELFLNSPQDDDLLDENRPRDGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVRE 228
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+A+ TGLS RV QVWFQN RA+ KK
Sbjct: 229 ALAKDTGLSVRVVQVWFQNQRAKMKK 254
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 197 PKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 254
>gi|296194639|ref|XP_002745038.1| PREDICTED: insulin gene enhancer protein ISL-1 [Callithrix jacchus]
Length = 348
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 25/168 (14%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G KC+ G + +D+V +AR VYH+ CF C A G+EFAL ED + C++
Sbjct: 72 IRLYGIKCAXXSIGFSKNDFVMRARSKVYHIECFRCVAAA-PAHPGDEFALREDGLFCRA 130
Query: 672 HYLELVDGGTTSSDD-------------GADSESSHSKS----------KAKRVRTTFTE 708
+ ++V+ + + D A+ S+ + K RVRT E
Sbjct: 131 DH-DVVERASLGAGDPLSPLHPARPLQMAAEPISARQPALRPHVHKQPEKTTRVRTVLNE 189
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 237
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 179 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 237
>gi|38349106|gb|AAR18074.1| LIM homeobox 8 [Homo sapiens]
Length = 73
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 51/59 (86%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+ HY
Sbjct: 2 YGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHY 60
>gi|345132131|gb|AEN75258.1| Lim1 [Neanthes arenaceodentata]
Length = 498
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC C +GI+ +D VR+AR+ V+HL CF C C++QLSTGEE + L E++ +CK
Sbjct: 78 FRRFGTKCGGCSQGISPNDLVRRARNKVFHLKCFTCMVCRKQLSTGEELYVLDENKFICK 137
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQV-LQANFQLDSNPDGQ 727
YL G + +D D+E +K +++ ++ + + L LDS P GQ
Sbjct: 138 EDYLSSKLQGGSDHEDNGDTELD-TKDMLEKLDDALSDRDMSLSLDGEDSLDSMPTGQ 194
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 687 GADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 746
G D E++ + +K + RTT +QL+VL+A F P E++AQ TGL+ RV QVW
Sbjct: 287 GKDGEAAPTGTKRRGPRTTIKAKQLEVLKAAFAATPKPTRHIREQLAQETGLNMRVIQVW 346
Query: 747 FQNSRARQKK 756
FQN R+++++
Sbjct: 347 FQNRRSKERR 356
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D E++ + +K + RTT +QL+VL+A F P E++AQ TGL+ R
Sbjct: 282 ADGKVGKDGEAAPTGTKRRGPRTTIKAKQLEVLKAAFAATPKPTRHIREQLAQETGLNMR 341
Query: 103 VTQVWFQNSRARQKK 117
V QVWFQN R+++++
Sbjct: 342 VIQVWFQNRRSKERR 356
>gi|209489466|gb|ACI49225.1| hypothetical protein Csp3_JD05.010 [Caenorhabditis angaria]
Length = 344
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 38/190 (20%)
Query: 600 ILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE 659
IL K S R +G +C+ C + + VR+ARD V+H+ CF C C+R L+TG++
Sbjct: 49 ILCKNDFS-----RRYGQRCAGCDGNLDKEELVRRARDKVFHIQCFQCSVCQRLLATGDQ 103
Query: 660 -FALHEDRVLCK-------------SHYLELVDGGTTSSD-------------------D 686
+ L +R +C+ S + L +G +SD
Sbjct: 104 LYILEGNRFVCQTDFQNATKTSTPTSSHRPLSNGSDCASDIEEDTICDEFQVDEIDGDMM 163
Query: 687 GADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 746
G D+ + +K + RTT +QL+ L++ F P E++AQ TGL+ RV QVW
Sbjct: 164 GKDNSDDSNSAKRRGPRTTIKAKQLETLKSAFAATPKPTRHIREQLAQETGLNMRVIQVW 223
Query: 747 FQNSRARQKK 756
FQN R+++++
Sbjct: 224 FQNRRSKERR 233
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 32 FQLDS-NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 90
FQ+D + D G D++D ++S +K + RTT +QL+ L++ F P
Sbjct: 153 FQVDEIDGDMMGKDNSDDSNS------AKRRGPRTTIKAKQLETLKSAFAATPKPTRHIR 206
Query: 91 ERIAQITGLSKRVTQVWFQNSRARQKK 117
E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 207 EQLAQETGLNMRVIQVWFQNRRSKERR 233
>gi|198437781|ref|XP_002124033.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 402
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 37/181 (20%)
Query: 613 RSFGAK-CSKCCRGIASSDWVRKARDHVYH--LACFACEACKRQLSTGEEFALHEDRVLC 669
R FG++ C+ C I + V + D VYH CF+C +C+R +TG+EF ++C
Sbjct: 94 RLFGSQLCTHCGVFIEPHELVMRVHDRVYHANYKCFSCCSCQRPFTTGQEFVEVAPNLVC 153
Query: 670 ------------------------------KSHYLELVDG---GTTSSDDGADSES-SHS 695
S +L+ + G + + +D+E +
Sbjct: 154 MDCCERESSSEYFDINLHKPGRPKKRKAIMTSSHLDSIGGMAVNYVTEEIRSDTERMNFP 213
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
K+KR+RT+F QL+ ++A F + NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +
Sbjct: 214 PHKSKRMRTSFKHHQLRAMKAYFHQNHNPDAKDLKQLAQETGLTKRVLQVWFQNARAKYR 273
Query: 756 K 756
+
Sbjct: 274 R 274
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 47/59 (79%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K+KR+RT+F QL+ ++A F + NPD +DL+++AQ TGL+KRV QVWFQN+RA+ ++
Sbjct: 216 KSKRMRTSFKHHQLRAMKAYFHQNHNPDAKDLKQLAQETGLTKRVLQVWFQNARAKYRR 274
>gi|393908929|gb|EJD75252.1| transcription factor protein [Loa loa]
Length = 594
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 48/187 (25%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFAL--HEDRVLCK----S 671
KC +C I+ +D V K R YH CF+C C ++L+ GEEF L ED +LC+ +
Sbjct: 255 KCIRCKEYISKTDMVMKIRTLTYHATCFSCSNCDKKLTIGEEFVLREREDDILCRADCDT 314
Query: 672 HYLELV----------------DGGTTSSDDGADSES-----------------SHSKSK 698
+ +E DG T +S D S + + SKS+
Sbjct: 315 NNIEQPSSIKTDIYGREEEDGWDGSTLTSLDNQMSSTPPLSLQSPKSDEIVTTFNTSKSQ 374
Query: 699 AK---------RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
K RVRT E+QL L+A + ++ PD E + ++TGLS RV +VWFQN
Sbjct: 375 IKKNKKDKQSTRVRTVLNEKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQN 434
Query: 750 SRARQKK 756
R + KK
Sbjct: 435 KRCKDKK 441
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
++ RVRT E+QL L+A + ++ PD E + ++TGLS RV +VWFQN R + KK
Sbjct: 383 QSTRVRTVLNEKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQNKRCKDKK 441
>gi|321473071|gb|EFX84039.1| hypothetical protein DAPPUDRAFT_24627 [Daphnia pulex]
Length = 225
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 13/169 (7%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHV-YHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +GAKC +C + + V +A + +HL CF C C R L G++F + ++LC+
Sbjct: 55 RVYGAKCGRCGERLYPHELVMRAGSSLAFHLPCFGCFICGRPLQKGDQFVVRAGQLLCRD 114
Query: 672 HY---LELVDGGTTS-----SDDGADSESSHSKSKA----KRVRTTFTEEQLQVLQANFQ 719
L L+ T + DD A +SS + KR RT T Q + +A+F+
Sbjct: 115 DLEKDLFLIQSTTNNNNNNNGDDSAADDSSRPRHDGRRGPKRPRTILTSAQRRQFKASFE 174
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQN 768
+ P + E +A+ TGLS RV QVWFQN RA+ KK K+++ +N
Sbjct: 175 ISPKPCRKVREALAKETGLSVRVVQVWFQNQRAKMKKLQRKAKIEAEKN 223
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 42 GADSTDHTDSESSHSKSKA-KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLS 100
G DS S H + KR RT T Q + +A+F++ P + E +A+ TGLS
Sbjct: 135 GDDSAADDSSRPRHDGRRGPKRPRTILTSAQRRQFKASFEISPKPCRKVREALAKETGLS 194
Query: 101 KRVTQVWFQNSRARQKKHLHTGKMKSSQN 129
RV QVWFQN RA+ KK K+++ +N
Sbjct: 195 VRVVQVWFQNQRAKMKKLQRKAKIEAEKN 223
>gi|47207847|emb|CAF94375.1| unnamed protein product [Tetraodon nigroviridis]
Length = 188
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +C++C R I SSDWVR+ R +HLACF+C +CKRQLSTGEE L E+RV C+
Sbjct: 113 FRRYGTRCARCGRNIGSSDWVRRVRGSTFHLACFSCSSCKRQLSTGEECGLLENRVFCRP 172
Query: 672 HYLELVD 678
HY +++
Sbjct: 173 HYEMMME 179
>gi|339261154|ref|XP_003368046.1| LIM homeobox transcription factor 1 alpha [Trichinella spiralis]
gi|316964817|gb|EFV49755.1| LIM homeobox transcription factor 1 alpha [Trichinella spiralis]
Length = 260
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G+KC+KC + SD+V++++D ++H+ CF C C + L G+E+ +++LC+
Sbjct: 5 FRIYGSKCAKCALPLNPSDFVQRSQDRIFHMNCFGCSICGKLLQPGDEYVRQNEQILCRG 64
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
+ LV + H K KR RT T Q + +A+F++ + P + E
Sbjct: 65 DFESLVHNPYEDAFKLGPFRHGHHKKTLKRPRTILTSHQRKTFKASFEVSAKPCRKVREA 124
Query: 732 IAQITGLSKRVTQV 745
+A+ TGLS RV Q+
Sbjct: 125 LAKETGLSVRVVQM 138
>gi|392925295|ref|NP_001256981.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
gi|351020894|emb|CCD62867.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
Length = 310
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
+G +C +C + +D V + YH CF+C +C+R + G+E+ + + V C++ Y
Sbjct: 99 YGKRCRRCMTLLLPTDIVHRVHFMYYHAQCFSCCSCQRPFNLGDEYHVFDGEVFCRNDYQ 158
Query: 675 ELVDGGTTSSDDGADSESSHS---KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
+ + T S+ D E S + KR RT +Q + + F+ S P + E+
Sbjct: 159 SICNFQTISNPDPLMEEVVRSEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQ 218
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A TGLS RV QVWFQN RA+ KK
Sbjct: 219 LANETGLSVRVVQVWFQNQRAKIKK 243
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 30 ANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 89
NFQ SNPD + S + KR RT +Q + + F+ S P +
Sbjct: 161 CNFQTISNPDPLMEEVV-----RSEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKV 215
Query: 90 LERIAQITGLSKRVTQVWFQNSRARQKK 117
E++A TGLS RV QVWFQN RA+ KK
Sbjct: 216 REQLANETGLSVRVVQVWFQNQRAKIKK 243
>gi|392925293|ref|NP_001256980.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
gi|351020895|emb|CCD62868.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
Length = 316
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
+G +C +C + +D V + YH CF+C +C+R + G+E+ + + V C++ Y
Sbjct: 99 YGKRCRRCMTLLLPTDIVHRVHFMYYHAQCFSCCSCQRPFNLGDEYHVFDGEVFCRNDYQ 158
Query: 675 ELVDGGTTSSDDGADSESSHS---KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
+ + T S+ D E S + KR RT +Q + + F+ S P + E+
Sbjct: 159 SICNFQTISNPDPLMEEVVRSEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQ 218
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A TGLS RV QVWFQN RA+ KK
Sbjct: 219 LANETGLSVRVVQVWFQNQRAKIKK 243
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 30 ANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQD 89
NFQ SNPD + S + KR RT +Q + + F+ S P +
Sbjct: 161 CNFQTISNPDPLMEEVV-----RSEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKV 215
Query: 90 LERIAQITGLSKRVTQVWFQNSRARQKK 117
E++A TGLS RV QVWFQN RA+ KK
Sbjct: 216 REQLANETGLSVRVVQVWFQNQRAKIKK 243
>gi|308220144|gb|ADO22644.1| TALE class homeobox transcription factor Isl [Mnemiopsis leidyi]
Length = 236
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Query: 634 KARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLE-------LVDGGTTSSDD 686
+ R++++HL+CF C C RQL GEEFAL + ++C +H + L + S
Sbjct: 2 RVRENIFHLSCFRCNMCSRQLVPGEEFALLPEGLICGTHIKQQHHQQAPLPNEPLPESKP 61
Query: 687 GADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVW 746
+ + S + K RVRT + QL++L+ + + PD E++ ++TGLS RV +VW
Sbjct: 62 RSTNTGSSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDALMKEQMTKLTGLSARVIRVW 121
Query: 747 FQNSR 751
FQN R
Sbjct: 122 FQNKR 126
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 54 SHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S + K RVRT + QL++L+ + + PD E++ ++TGLS RV +VWFQN R
Sbjct: 68 SSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDALMKEQMTKLTGLSARVIRVWFQNKR 126
>gi|124377606|dbj|BAF46220.1| LIM homeobox gene 9 epsilon protein [Glandirana rugosa]
Length = 297
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 55/188 (29%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + LSTG+ F + E+ V +
Sbjct: 107 YRRFSVQRCARCHLGISASEIVMRARESVYHLSCFTCTXCNKTLSTGDHFGMKENLVYRR 166
Query: 671 SHYLELVDG--------------------------------------------------- 679
+H+ LV G
Sbjct: 167 AHFELLVQGDFHSQLNYTELSAKGGGLSALPYFTNGTGAVQKGRPRKRKSPALGVDIINY 226
Query: 680 --GTTSSDDGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
G +D D + S+ S K KR+RT+F QL+ ++ F ++ NPD +DL+++AQ T
Sbjct: 227 TSGCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKT 286
Query: 737 GLSKRVTQ 744
L+KRV Q
Sbjct: 287 RLTKRVLQ 294
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 40 GFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
G + TD +S K KR+RT+F QL+ ++ F ++ NPD +DL+++AQ T L
Sbjct: 229 GCNENDTDLDRDQSYPPSQKTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTRL 288
Query: 100 SKRVTQ 105
+KRV Q
Sbjct: 289 TKRVLQ 294
>gi|268567057|ref|XP_002639879.1| C. briggsae CBR-LIN-11 protein [Caenorhabditis briggsae]
Length = 411
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 35/190 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G +C+ C + D VR+ARD V+H+ CF C C+R L TG++ + E +C++
Sbjct: 128 RRYGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRMCQND 187
Query: 673 YLELVDGGTTSS---------------------------------DDGADSESSHSKSKA 699
+ T +S D G D+ + +K
Sbjct: 188 FQTATKTSTPTSMHRPISNGSECNSDIEEDNVDACDEGGLDDVDGDCGKDNSDDSNSAKR 247
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK--KH 757
+ RTT +QL+ L+ F P E++A TGL+ RV QVWFQN R++++ K
Sbjct: 248 RGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMKQ 307
Query: 758 LHTGKMKSSQ 767
L G + S+
Sbjct: 308 LRYGGYRQSR 317
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 18/113 (15%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G D++D ++S +K + RTT +QL+ L+ F P E++A TGL+
Sbjct: 235 GKDNSDDSNS------AKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNM 288
Query: 102 RVTQVWFQNSRARQK--KHLHTGKMKSSQNRPKYG----------YYPEPNKS 142
RV QVWFQN R++++ K L G + S+ + + +YP P S
Sbjct: 289 RVIQVWFQNRRSKERRMKQLRYGGYRQSRRQRREDIVDMFPNDQQFYPPPPPS 341
>gi|397574393|gb|EJK49185.1| hypothetical protein THAOC_31971 [Thalassiosira oceanica]
Length = 261
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 410 ALNCKKGGLVKHGHDYLRDECIMMASYA-------------WNGIVKEPIMRDSSSTSPA 456
AL CK GGLV HD RDE +AS A + G EP+ R ++ S
Sbjct: 29 ALTCKTGGLVVMRHDDCRDEFGDIASKATTPSRVTTEPLIHYGG--NEPVTRQANGASNT 86
Query: 457 LI------------ADFKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKH 504
D I+G + TA D I + DAPSY Q + ++ A+ K
Sbjct: 87 SNNNNSSTRGGEERGDLAIHGFVQRSKTAILDFVITDTDAPSYGHQPSKKVLEKAAKRKK 146
Query: 505 LKYNTAAEDLRASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTE 564
KY A + R F P+ S DG E + KR+A +L+ KW + Y + +++ R
Sbjct: 147 DKYLEACRERRRDFIPMAYSVDGLAGKEARAAEKRLASLLASKWDRPYSEMACFVKTRMS 206
Query: 565 FSILKAVSLRLRGTRQIV-KPYGFDDGAGLM 594
SI++++S+ LRG+R K DDG +
Sbjct: 207 LSIVRSISMLLRGSRSSAWKRRAPDDGVAAL 237
>gi|258504095|gb|ACV72753.1| LIN-11 [Caenorhabditis remanei]
gi|258504097|gb|ACV72754.1| LIN-11 [Caenorhabditis remanei]
gi|258504103|gb|ACV72757.1| LIN-11 [Caenorhabditis remanei]
gi|258504107|gb|ACV72759.1| LIN-11 [Caenorhabditis remanei]
gi|258504109|gb|ACV72760.1| LIN-11 [Caenorhabditis remanei]
gi|258504111|gb|ACV72761.1| LIN-11 [Caenorhabditis remanei]
gi|258504117|gb|ACV72764.1| LIN-11 [Caenorhabditis remanei]
gi|258504119|gb|ACV72765.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCKS 671
R +G +C+ C + D VR+ARD V+H+ CF C C+R L TG++ + E +R +C++
Sbjct: 116 RRYGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQN 175
Query: 672 HYLELVDGGTTSS---------------------------------DDGADSESSHSKSK 698
+ T +S D G D+ + +K
Sbjct: 176 DFQTATKTSTPTSMHRPISNGSECNSDMEEDAVDACDDVGLDDGEGDCGKDNSDDSNSAK 235
Query: 699 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK--K 756
+ RTT +QL+ L+ F P E++A TGL+ RV QVWFQN R++++ K
Sbjct: 236 RRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMK 295
Query: 757 HLHTGKMKSSQ 767
L G + S+
Sbjct: 296 QLRYGGYRQSR 306
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
DG G D++D +S +K + RTT +QL+ L+ F P E++A TG
Sbjct: 218 DGEGDCGKDNSDDSNS---AKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETG 274
Query: 99 LSKRVTQVWFQNSRARQK--KHLHTGKMKSSQNRPKYG----------YYPEPNKS 142
L+ RV QVWFQN R++++ K L G + S+ + + +YP P S
Sbjct: 275 LNMRVIQVWFQNRRSKERRMKQLRYGGYRQSRRQRREDIVDMFPNDQQFYPPPPPS 330
>gi|321454677|gb|EFX65838.1| hypothetical protein DAPPUDRAFT_13685 [Daphnia pulex]
Length = 266
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 49/193 (25%)
Query: 613 RSFGAK--CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
R FG + C+KCC + + V + R+H++H CF+C C+ L G F + + C+
Sbjct: 57 RLFGGRKQCAKCCETLQPDELVMRGREHLFHTRCFSCHVCQTHLIKGSTFGMVGALIFCQ 116
Query: 671 S-----------------------------------------------HYLELVDGGTTS 683
H + G +
Sbjct: 117 QHYQPGSSAPSGFNGQPLAASQQPPVETYMGHHQEPFGSPRPFEHHALHQQQHYHGQMVN 176
Query: 684 SDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 743
S S + K KR+RT+F QL++L++ F + NPD +DL++++Q T LSKRV
Sbjct: 177 STGLQQVSSQQQQQKTKRLRTSFKHHQLRMLKSYFATNHNPDAKDLKQLSQKTTLSKRVL 236
Query: 744 QVWFQNSRARQKK 756
QVWFQN+RA+ ++
Sbjct: 237 QVWFQNARAKWRR 249
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K KR+RT+F QL++L++ F + NPD +DL++++Q T LSKRV QVWFQN+RA+ ++
Sbjct: 191 KTKRLRTSFKHHQLRMLKSYFATNHNPDAKDLKQLSQKTTLSKRVLQVWFQNARAKWRR 249
>gi|258504089|gb|ACV72750.1| LIN-11 [Caenorhabditis remanei]
gi|258504091|gb|ACV72751.1| LIN-11 [Caenorhabditis remanei]
gi|258504093|gb|ACV72752.1| LIN-11 [Caenorhabditis remanei]
gi|258504099|gb|ACV72755.1| LIN-11 [Caenorhabditis remanei]
gi|258504113|gb|ACV72762.1| LIN-11 [Caenorhabditis remanei]
gi|258504115|gb|ACV72763.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCKS 671
R +G +C+ C + D VR+ARD V+H+ CF C C+R L TG++ + E +R +C++
Sbjct: 116 RRYGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQN 175
Query: 672 HYLELVDGGTTSS---------------------------------DDGADSESSHSKSK 698
+ T +S D G D+ + +K
Sbjct: 176 DFQTATKTSTPTSMHRPISNGSECNSDMEEDAVDACDDVGLDDGEGDCGKDNSDDSNSAK 235
Query: 699 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK--K 756
+ RTT +QL+ L+ F P E++A TGL+ RV QVWFQN R++++ K
Sbjct: 236 RRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMK 295
Query: 757 HLHTGKMKSSQ 767
L G + S+
Sbjct: 296 QLRYGGYRQSR 306
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
DG G D++D +S +K + RTT +QL+ L+ F P E++A TG
Sbjct: 218 DGEGDCGKDNSDDSNS---AKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETG 274
Query: 99 LSKRVTQVWFQNSRARQK--KHLHTGKMKSSQNRPKYG----------YYPEPNKS 142
L+ RV QVWFQN R++++ K L G + S+ + + +YP P S
Sbjct: 275 LNMRVIQVWFQNRRSKERRMKQLRYGGYRQSRRQRREDIVDMFPNDQQFYPPPPPS 330
>gi|312370934|gb|EFR19232.1| hypothetical protein AND_22855 [Anopheles darlingi]
Length = 919
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---L 674
+C C I + + V +A D+V+HL CF C C +L G+++ + + ++ C+ Y +
Sbjct: 47 RCLGCGEKIGADELVMRALDNVFHLKCFICVVCGVRLQKGDQYVIKQSQLFCRPDYEKEV 106
Query: 675 ELVDGGTTSSDDGADSESSHSK----SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
E+ G S DD + ++ KR RT T +Q + +A+F + P + E
Sbjct: 107 EMFQG--YSYDDYCCDDMFQTRIDGRRGPKRPRTILTTQQRRAFKASFDISPKPCRKIRE 164
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+A+ TGLS R+ QVWFQN RA+ KK
Sbjct: 165 GLAKDTGLSIRIVQVWFQNQRAKMKK 190
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F + P + E +A+ TGLS R+ QVWFQN RA+ KK
Sbjct: 133 PKRPRTILTTQQRRAFKASFDISPKPCRKIREGLAKDTGLSIRIVQVWFQNQRAKMKK 190
>gi|258504101|gb|ACV72756.1| LIN-11 [Caenorhabditis remanei]
gi|258504105|gb|ACV72758.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCKS 671
R +G +C+ C + D VR+ARD V+H+ CF C C+R L TG++ + E +R +C++
Sbjct: 116 RRYGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQN 175
Query: 672 HYLELVDGGTTSS---------------------------------DDGADSESSHSKSK 698
+ T +S D G D+ + +K
Sbjct: 176 DFQTATKTSTPTSMHRPISNGSECNSDMEEDAVDACDDVGLDDGEGDCGKDNSDDSNSAK 235
Query: 699 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK--K 756
+ RTT +QL+ L+ F P E++A TGL+ RV QVWFQN R++++ K
Sbjct: 236 RRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMK 295
Query: 757 HLHTGKMKSSQ 767
L G + S+
Sbjct: 296 QLRYGGYRQSR 306
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
DG G D++D +S +K + RTT +QL+ L+ F P E++A TG
Sbjct: 218 DGEGDCGKDNSDDSNS---AKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETG 274
Query: 99 LSKRVTQVWFQNSRARQK--KHLHTGKMKSSQNRPKYG----------YYPEPNKS 142
L+ RV QVWFQN R++++ K L G + S+ + + +YP P S
Sbjct: 275 LNMRVIQVWFQNRRSKERRMKQLRYGGYRQSRRQRREDIVDMFPNDQQFYPPPPPS 330
>gi|308485364|ref|XP_003104881.1| CRE-LIN-11 protein [Caenorhabditis remanei]
gi|308257579|gb|EFP01532.1| CRE-LIN-11 protein [Caenorhabditis remanei]
Length = 415
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCKS 671
R +G +C+ C + D VR+ARD V+H+ CF C C+R L TG++ + E +R +C++
Sbjct: 131 RRYGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQN 190
Query: 672 HYLELVDGGTTSS---------------------------------DDGADSESSHSKSK 698
+ T +S D G D+ + +K
Sbjct: 191 DFQTATKTSTPTSMHRPISNGSECNSDMEEDAVDACDDVGLDDGEGDCGKDNSDDSNSAK 250
Query: 699 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK--K 756
+ RTT +QL+ L+ F P E++A TGL+ RV QVWFQN R++++ K
Sbjct: 251 RRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMK 310
Query: 757 HLHTGKMKSSQ 767
L G + S+
Sbjct: 311 QLRYGGYRQSR 321
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
DG G D++D +S +K + RTT +QL+ L+ F P E++A TG
Sbjct: 233 DGEGDCGKDNSDDSNS---AKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETG 289
Query: 99 LSKRVTQVWFQNSRARQK--KHLHTGKMKSSQNRPKYG----------YYPEPNKS 142
L+ RV QVWFQN R++++ K L G + S+ + + +YP P S
Sbjct: 290 LNMRVIQVWFQNRRSKERRMKQLRYGGYRQSRRQRREDIVDMFPNDQQFYPPPPPS 345
>gi|209489337|gb|ACI49110.1| hypothetical protein Cbre_JD13.012 [Caenorhabditis brenneri]
Length = 369
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 36/191 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCKS 671
R +G +C+ C + D VR+ARD V+H+ CF C C+R L TG++ + E +R +C++
Sbjct: 85 RRYGHRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFMCQN 144
Query: 672 HYL------------ELVDGGTTSSDD---------------------GADSESSHSKSK 698
+ V G+ + D G D+ + +K
Sbjct: 145 DFQTATKTSTPTSMHRPVSNGSECNSDMEEDNVDACDDVGLDDVDGDCGKDNSDDSNSAK 204
Query: 699 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK--K 756
+ RTT +QL+ L+ F P E++A TGL+ RV QVWFQN R++++ K
Sbjct: 205 RRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMK 264
Query: 757 HLHTGKMKSSQ 767
L G + S+
Sbjct: 265 QLRYGGYRQSR 275
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 42 GADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 101
G D++D ++S +K + RTT +QL+ L+ F P E++A TGL+
Sbjct: 193 GKDNSDDSNS------AKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNM 246
Query: 102 RVTQVWFQNSRARQK--KHLHTGKMKSSQNRPKYG----------YYPEPNKS 142
RV QVWFQN R++++ K L G + S+ + + +YP+P S
Sbjct: 247 RVIQVWFQNRRSKERRMKQLRYGGYRQSRRQRREDIVDMFPNDQQFYPQPPPS 299
>gi|348505058|ref|XP_003440078.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 361
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F +C+ C I+ ++ V +A V+HL CF C C +L TG+ L E ++LC
Sbjct: 72 FAVRCAGCTEAISPAELVMRAGAAVFHLRCFTCSVCSCRLQTGDRCVLREGQLLCAREGY 131
Query: 675 ELVDGGTTSSDDG--------------------ADSESSHSKSKAKRVRTTFTEEQLQVL 714
+SS+ G S+ SK + KR RT T +Q +
Sbjct: 132 HQCLASPSSSETGKSDDEDEEVEEESGRITGRKVKSDDVESK-RPKRPRTILTTQQRRTF 190
Query: 715 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 191 KASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 232
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 174 RPKRPRTILTTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 232
>gi|449282069|gb|EMC88978.1| LIM/homeobox protein Lhx1 [Columba livia]
Length = 400
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 77/161 (47%), Gaps = 37/161 (22%)
Query: 622 CCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKSHYLE----- 675
C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK YL
Sbjct: 60 CAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLNNSNTA 119
Query: 676 ----------------LVDGGTTSSDDGADSESSHSKSK-------------AKR--VRT 704
D S DD DSES++ K AKR RT
Sbjct: 120 KENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKETGSNENDDQNLGAKRRGPRT 179
Query: 705 TFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 745
T +QL+ L+A F P E++AQ TGL+ RV QV
Sbjct: 180 TIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 220
>gi|402592128|gb|EJW86057.1| hypothetical protein WUBG_03029, partial [Wuchereria bancrofti]
Length = 218
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KC +C + S+D+V + +YHL CF C C G+ + L + +++C+ Y
Sbjct: 2 FGVKCVRCGLPVRSTDYVYRVFASIYHLHCFKCFCCGHLFKKGDHYVLVDGQIICRPDYE 61
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
L+ ++ ++ KR RT +Q + + F+ S P + E++A+
Sbjct: 62 HLLCQPPICQSHLYFDQNDSNRKTPKRPRTILNTQQRKAFKLAFEKTSKPCRKVREQLAK 121
Query: 735 ITGLSKRVTQVWFQNSRARQKK 756
T LS RV QVWFQN RA+ KK
Sbjct: 122 ETNLSVRVVQVWFQNQRAKMKK 143
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
D S+ K+ KR RT +Q + + F+ S P + E++A+ T LS RV QVWFQ
Sbjct: 77 DQNDSNRKT-PKRPRTILNTQQRKAFKLAFEKTSKPCRKVREQLAKETNLSVRVVQVWFQ 135
Query: 110 NSRARQKK 117
N RA+ KK
Sbjct: 136 NQRAKMKK 143
>gi|195354923|ref|XP_002043945.1| GM13699 [Drosophila sechellia]
gi|194129190|gb|EDW51233.1| GM13699 [Drosophila sechellia]
Length = 424
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL--ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQAN 717
+ L +++ +CK YL + G S D +S T L VL N
Sbjct: 128 YVLDDNKFICKDDYLLGKAPSCGHNSLSDSLMGSASEDDDDDDPPHLRATALGLGVLGPN 187
Query: 718 FQLDS--NPDGQDLERIAQITGLSKRV----TQVWFQNSRARQKK 756
DS P G + ++ SK QVWF N R+++++
Sbjct: 188 -GPDSAGGPLGTSDISVQSMSTDSKNTHDDSDQVWFPNKRSKERR 231
>gi|156400076|ref|XP_001638826.1| predicted protein [Nematostella vectensis]
gi|156225950|gb|EDO46763.1| predicted protein [Nematostella vectensis]
Length = 757
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 121/297 (40%), Gaps = 60/297 (20%)
Query: 272 GGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQ-LNLQEHNQCVKNAINTELVRKETE 330
GG+GI D A F +S+ + VDS++ Q + E + +K INT+ +
Sbjct: 499 GGIGIPDLKREAPEQFKASSDITAIHVDSIVAQSSSMPANEQLEELKRDINTQ---RRAS 555
Query: 331 YQEKQERILSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFDLSPVQFRDALALRYNHG 390
+ +++RI SL P + + + ++S WLN P
Sbjct: 556 AKSRRDRIDESLSPDLLHAVQQTRDKEASSWLNATP------------------------ 591
Query: 391 LKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDECIMMASYAWNGIVKEPIMR-- 448
+K G V HD +RD S + EP+++
Sbjct: 592 ----------------------IEKRGFVAQRHDTIRDLLTAHISKVCKNVETEPLLQPL 629
Query: 449 -------DSSSTSPALIADFKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQ 501
S+ TS D K G W G TAFFD R+ + ++ S ++ TI +
Sbjct: 630 DNEVFNLQSTVTSKEARLDIKAGGFWTPGVTAFFDVRVTHVNSQSNQNKPTETIFREQEN 689
Query: 502 EKHLKYNTAAEDLR-ASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLS 557
EK KYN ++ +FTPLV T+G + ++ +FLK +A LS K + Y V+S
Sbjct: 690 EKKRKYNQRIINVEMGTFTPLVFGTNGGMGVDCKNFLKSLAEKLSIKNGEAYASVIS 746
>gi|339247641|ref|XP_003375454.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
gi|316971202|gb|EFV55014.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
Length = 305
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R +G+KC+KC + SD+V++++D ++H+ CF C C + L G+E+ +++LC+
Sbjct: 50 LRIYGSKCAKCALPLNPSDFVQRSQDRIFHMNCFGCSICGKLLQPGDEYVRQNEQILCRG 109
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
+ LV + H K KR RT T Q + +A+F++ + P + E
Sbjct: 110 DFESLVHNPYEDAFKLGPFRHGHHKKTLKRPRTILTSHQRKTFKASFEVSAKPCRKVREA 169
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A+ TGLS RV Q+ + ++ KK
Sbjct: 170 LAKETGLSVRVVQMKKLHRKSEYKK 194
>gi|156543668|ref|XP_001605174.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Nasonia
vitripennis]
Length = 419
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARD--------HVYHLACFACEACKRQLSTGEEFALHE 664
R +GAKC++C + I S++ V + + V+H+ CF C C QL G + L
Sbjct: 112 RIYGAKCARCRQKIESNELVMRVPNCSQSALNGPVFHVDCFVCCICGDQLLRGAHYILRH 171
Query: 665 DRVLCKSHYLELVDGGTTSSDDGA--DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDS 722
LCK + + + DD DS + KR RT T Q + +A+F++
Sbjct: 172 GLPLCKREFQNDIYNMNSPQDDDLLDDSRPRDGRRGPKRPRTILTSVQRRQFKASFEISP 231
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 232 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 265
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 50 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQ 109
DS + KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQ
Sbjct: 198 DSRPRDGRRGPKRPRTILTSVQRRQFKASFEISPKPCRKVREALAKDTGLSVRVVQVWFQ 257
Query: 110 NSRARQKKHLHTGKMKSSQNR-PKYGYYPE 138
N RA+ KK K + ++ PK PE
Sbjct: 258 NQRAKMKKLQRKAKTEPGSDKEPKEERKPE 287
>gi|391341454|ref|XP_003745045.1| PREDICTED: LIM/homeobox protein Lhx9-like [Metaseiulus
occidentalis]
Length = 343
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 89/220 (40%), Gaps = 74/220 (33%)
Query: 612 FRSFGAK-CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
FR F + CS+C GI S++ V + RD+VYH CF C C LS G+ F + + V C
Sbjct: 79 FRLFSLRPCSRCNIGIFSTELVMRVRDYVYHTHCFTCAWCNIPLSRGDTFGVRDQLVYCS 138
Query: 671 SHYLELVDGG--TTSSDDGADSESSH------------------------SKSKAKRVRT 704
HY + G TTS + E H +K R R
Sbjct: 139 LHYGAISAEGDLTTSLGPATEFEDIHETPISPQQYSPNQSPLQQQQQQQPAKKGRPRKRK 198
Query: 705 TFTEEQLQVLQAN----------------------------------------------- 717
+E +LQ LQ
Sbjct: 199 IESEHELQTLQGQMECQVSPGGALSPLSSLGDKLQLSGQQRTKRMRTSFKHHQLRTMKTY 258
Query: 718 FQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
F ++ NPD +DL+++AQ TGLSKRV QVWFQN+RA+ +++
Sbjct: 259 FGINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRN 298
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%)
Query: 9 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFT 68
+K R R +E +LQ LQ + +P G + + D + + KR+RT+F
Sbjct: 189 AKKGRPRKRKIESEHELQTLQGQMECQVSPGGALSPLSSLGDKLQLSGQQRTKRMRTSFK 248
Query: 69 EEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
QL+ ++ F ++ NPD +DL+++AQ TGLSKRV QVWFQN+RA+ +++
Sbjct: 249 HHQLRTMKTYFGINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRN 298
>gi|17508255|ref|NP_492696.1| Protein LIN-11 [Caenorhabditis elegans]
gi|2506818|sp|P20154.2|LIN11_CAEEL RecName: Full=Protein lin-11; AltName: Full=Abnormal cell lineage
protein 11
gi|3881427|emb|CAB02310.1| Protein LIN-11 [Caenorhabditis elegans]
Length = 405
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 36/191 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCKS 671
R + +C+ C + D VR+ARD V+H+ CF C C+R L TG++ + E +R +C+S
Sbjct: 121 RRYSQRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFVCQS 180
Query: 672 HYLELVDGGTTSS---------------------------------DDGADSESSHSKSK 698
+ T +S D G D+ + +K
Sbjct: 181 DFQTATKTSTPTSIHRPVSNGSECNSDVEEDNVDACDEVGLDDGEGDCGKDNSDDSNSAK 240
Query: 699 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK--K 756
+ RTT +QL+ L+ F P E++A TGL+ RV QVWFQN R++++ K
Sbjct: 241 RRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMK 300
Query: 757 HLHTGKMKSSQ 767
L G + S+
Sbjct: 301 QLRFGGYRQSR 311
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
DG G D++D +S +K + RTT +QL+ L+ F P E++A TG
Sbjct: 223 DGEGDCGKDNSDDSNS---AKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETG 279
Query: 99 LSKRVTQVWFQNSRARQK--KHLHTGKMKSSQNRPKYG-----------YYPEPNKS 142
L+ RV QVWFQN R++++ K L G + S+ RP+ +YP P S
Sbjct: 280 LNMRVIQVWFQNRRSKERRMKQLRFGGYRQSR-RPRRDDIVDMFPNDQQFYPPPPPS 335
>gi|829167|emb|CAA38240.1| lin-11 protein [Caenorhabditis elegans]
gi|226840|prf||1608206A lin-11 gene
Length = 382
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 36/191 (18%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCKS 671
R + +C+ C + D VR+ARD V+H+ CF C C+R L TG++ + E +R +C+S
Sbjct: 98 RRYSQRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFVCQS 157
Query: 672 HYLELVDGGTTSS---------------------------------DDGADSESSHSKSK 698
+ T +S D G D+ + +K
Sbjct: 158 DFQTATKTSTPTSIHRPVSNGSECNSDVEEDNVDACDEVGLDDGEGDCGKDNSDDSNSAK 217
Query: 699 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK--K 756
+ RTT +QL+ L+ F P E++A TGL+ RV QVWFQN R++++ K
Sbjct: 218 RRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMK 277
Query: 757 HLHTGKMKSSQ 767
L G + S+
Sbjct: 278 QLRFGGYRQSR 288
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 17/117 (14%)
Query: 39 DGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 98
DG G D++D +S +K + RTT +QL+ L+ F P E++A TG
Sbjct: 200 DGEGDCGKDNSDDSNS---AKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETG 256
Query: 99 LSKRVTQVWFQNSRARQK--KHLHTGKMKSSQNRPKYG-----------YYPEPNKS 142
L+ RV QVWFQN R++++ K L G + S+ RP+ +YP P S
Sbjct: 257 LNMRVIQVWFQNRRSKERRMKQLRFGGYRQSR-RPRRDDIVDMFPNDQQFYPPPPPS 312
>gi|340377757|ref|XP_003387395.1| PREDICTED: LIM/homeobox protein Lhx5-like [Amphimedon
queenslandica]
Length = 272
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 59/210 (28%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCK 670
FR +G +C+ C G+ D VR+ + +YH+ CF C C+RQL+TGE+ L + ++ LC
Sbjct: 58 FRQYGTQCASCKEGLCPEDLVRRGVNKIYHVQCFKCSVCQRQLNTGEQLYLVQGEKFLCD 117
Query: 671 SHY---------------------------------------------LELVDGGTTSSD 685
S Y V G T+
Sbjct: 118 SCYPAPAPSQPTVLQQQQSSSPPPPSSSQPMVTQTTPINPPPSSFTPAANPVGSGATAVS 177
Query: 686 DGADSESSHSKS-------------KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+ + + S+S S + + RT+ +QL VLQA ++ + P E +
Sbjct: 178 NVSAMDESYSPSTTGNDPLIGSGDNRKGKTRTSINPKQLIVLQATYEKEPRPSRAMREDL 237
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGK 762
A TGL+ +V QVWFQN R++ KK G+
Sbjct: 238 AAQTGLTAKVIQVWFQNRRSKDKKDGTKGE 267
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 14/108 (12%)
Query: 30 ANFQLDSNPDGFGADSTDHTDS-ESSHSKS-------------KAKRVRTTFTEEQLQVL 75
++F +NP G GA + + + + S+S S + + RT+ +QL VL
Sbjct: 160 SSFTPAANPVGSGATAVSNVSAMDESYSPSTTGNDPLIGSGDNRKGKTRTSINPKQLIVL 219
Query: 76 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
QA ++ + P E +A TGL+ +V QVWFQN R++ KK G+
Sbjct: 220 QATYEKEPRPSRAMREDLAAQTGLTAKVIQVWFQNRRSKDKKDGTKGE 267
>gi|328715997|ref|XP_001946565.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 407
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
R FG KC +C + + + V R HVYH+ CFAC AC + L G+++ + ++ C
Sbjct: 86 RLFGVKCGRCGEPLGARELVMRAGPSHVYHVGCFACVACMQPLQKGQQYVVKAGGGQLFC 145
Query: 670 KSHYLELV-----DGGTTSSDDG----ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQL 720
++ + + + G+ DD + + KR RT T Q + +A+F++
Sbjct: 146 RTDFEKEIFLMQQTVGSPQPDDSLTLDENCRPRDGRRGPKRPRTILTSVQRRQFKASFEV 205
Query: 721 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 206 SPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 241
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A+F++ P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 185 KRPRTILTSVQRRQFKASFEVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 241
>gi|9409734|emb|CAB98128.1| LIM-homeobox 9 [Homo sapiens]
Length = 257
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 17/153 (11%)
Query: 623 CRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVDG--- 679
C G S + A D +HL C C CK L + + + CK Y
Sbjct: 16 CGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSVQRC 75
Query: 680 -----GTTSSDDGADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
G ++S+ ++E+ H K KR+RT+F QL+ +++ F ++ NPD
Sbjct: 76 ARCHLGISASESCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPD 135
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
+DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 136 AKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 168
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 93 ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 151
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 152 VLQVWFQNARAKFRRNL 168
>gi|324509239|gb|ADY43889.1| Insulin enhancer protein isl-2b [Ascaris suum]
Length = 427
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 51/196 (26%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED----RV 667
R F KCS+C +D V +AR VYH+ CF C +C+++L GEEF + +D R
Sbjct: 93 VRLFATKCSRCDGTFGRTDLVMRARHLVYHVNCFTCLSCEKRLVPGEEFIIKDDELYCRA 152
Query: 668 LCKSHYLELVDGGTTS-----SDDGADSES------------------------------ 692
C+ +E T DD DS +
Sbjct: 153 DCEPTNIEQPSSIKTDIFGRDEDDCWDSSTLTSLDMHMAATPPLSLHSPKSDEVITTTFH 212
Query: 693 -----------SHSKSK-AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 740
H K K RVRT E+QL L+ + ++ PD E++ ++TGLS
Sbjct: 213 NSSSSSSGSTKKHKKDKQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSA 272
Query: 741 RVTQVWFQNSRARQKK 756
RV +VWFQN R + KK
Sbjct: 273 RVIRVWFQNKRCKDKK 288
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 55 HSKSK-AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 113
H K K RVRT E+QL L+ + ++ PD E++ ++TGLS RV +VWFQN R
Sbjct: 225 HKKDKQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSARVIRVWFQNKRC 284
Query: 114 RQKK 117
+ KK
Sbjct: 285 KDKK 288
>gi|324508533|gb|ADY43602.1| Insulin gene enhancer protein isl-2b [Ascaris suum]
Length = 452
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 51/196 (26%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED----RV 667
R F KCS+C +D V +AR VYH+ CF C +C+++L GEEF + +D R
Sbjct: 93 VRLFATKCSRCDGTFGRTDLVMRARHLVYHVNCFTCLSCEKRLVPGEEFIIKDDELYCRA 152
Query: 668 LCKSHYLELVDGGTTS-----SDDGADSES------------------------------ 692
C+ +E T DD DS +
Sbjct: 153 DCEPTNIEQPSSIKTDIFGRDEDDCWDSSTLTSLDMHMAATPPLSLHSPKSDEVITTTFH 212
Query: 693 -----------SHSKSK-AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 740
H K K RVRT E+QL L+ + ++ PD E++ ++TGLS
Sbjct: 213 NSSSSSSGSTKKHKKDKQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSA 272
Query: 741 RVTQVWFQNSRARQKK 756
RV +VWFQN R + KK
Sbjct: 273 RVIRVWFQNKRCKDKK 288
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 55 HSKSK-AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 113
H K K RVRT E+QL L+ + ++ PD E++ ++TGLS RV +VWFQN R
Sbjct: 225 HKKDKQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSARVIRVWFQNKRC 284
Query: 114 RQKK 117
+ KK
Sbjct: 285 KDKK 288
>gi|170032117|ref|XP_001843929.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871878|gb|EDS35261.1| lim homeobox protein [Culex quinquefasciatus]
Length = 453
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C C I + + V +A D+V+HL CF C C +L G+++ + + ++ C+ Y + V
Sbjct: 65 RCLGCGEKIGADELVMRALDNVFHLKCFICVVCGIRLQKGDQYVIKQSQLFCRPDYEKEV 124
Query: 678 D--GGTTSSDDGADS---ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+ G D D + KR RT T +Q + +A+F++ P + E +
Sbjct: 125 EMFQGYNYDDYCCDDIFQTRIDGRRGPKRPRTILTTQQRRAFKASFEVSPKPCRKIREGL 184
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
A+ TGLS R+ QVWFQN RA+ KK
Sbjct: 185 AKDTGLSIRIVQVWFQNQRAKMKK 208
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN RA+ KK
Sbjct: 152 KRPRTILTTQQRRAFKASFEVSPKPCRKIREGLAKDTGLSIRIVQVWFQNQRAKMKK 208
>gi|397602977|gb|EJK58318.1| hypothetical protein THAOC_21572, partial [Thalassiosira oceanica]
Length = 213
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 7/166 (4%)
Query: 263 ELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDSLLKQEQLNLQEHNQCVKNAINT 322
EL R GGLGI +P++TA+ A + LVDS+++ E+L++ H + +K
Sbjct: 13 ELLANAVRNGGLGIRNPIDTAERQHATSVSVTLTLVDSIVRGEKLDMLAHERQMKETRKC 72
Query: 323 ELVRKETEYQEKQERI--LSSLPPAKQRVLTRIVEGQSSHWLNVIPKSSDNFDLSPVQFR 380
E +E +++ I L P+ + L R S WL+ IP + LS V+FR
Sbjct: 73 E---REVRAMDEESFIFQLGQRKPSLKNRLAR--ASNSGTWLSAIPNHLCDNILSAVEFR 127
Query: 381 DALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYL 426
D + LRY L + CDGCG V H L+C GGL HD L
Sbjct: 128 DNIRLRYGLVPLNLESICDGCGKRADVEHYLSCPVGGLRTIRHDQL 173
>gi|312086430|ref|XP_003145073.1| homeobox domain-containing protein [Loa loa]
Length = 169
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 28/154 (18%)
Query: 632 VRKARDHVYHLACFACEACKRQLSTGEEFALHE--DRVLCK----SHYLELV-------- 677
V K R YH CF+C C ++L+ GEEF L E D +LC+ ++ +E
Sbjct: 2 VMKIRTLTYHATCFSCSNCDKKLTIGEEFVLREREDDILCRADCDTNNIEQPSSIKTDIY 61
Query: 678 --------DGGTTSSDDGADSES------SHSKSKAKRVRTTFTEEQLQVLQANFQLDSN 723
DG T +S D S + S ++ RVRT E+QL L+A + ++
Sbjct: 62 GREEEDGWDGSTLTSLDNQMSSTPPLSLQSPKSDESTRVRTVLNEKQLMTLKACYAANAR 121
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD E + ++TGLS RV +VWFQN R + KK
Sbjct: 122 PDAMMKEHLVEMTGLSPRVIRVWFQNKRCKDKKR 155
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 54 SHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 113
S ++ RVRT E+QL L+A + ++ PD E + ++TGLS RV +VWFQN R
Sbjct: 91 SPKSDESTRVRTVLNEKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQNKRC 150
Query: 114 RQKKH 118
+ KK
Sbjct: 151 KDKKR 155
>gi|339252326|ref|XP_003371386.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
gi|316968365|gb|EFV52646.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
Length = 309
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 52/197 (26%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
+ +GAKCS+C + + D VR AR+ +H+ CF C C+++L+TG++ + +++ +CK
Sbjct: 64 LKRYGAKCSRCSQNFSRGDLVRYARNKAFHIDCFCCTICQKRLNTGDQLYIINDSTFVCK 123
Query: 671 SHYLEL-----------------------------------------------VDGGTTS 683
+ Y++ + G+
Sbjct: 124 TDYMKTSHAQKAILEEQDVLSPADEQHFASSSPDSCCSQEQAKLSKNDDSINGISNGSNG 183
Query: 684 SDDGADSESS--HSKSKAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLS 739
+D A + +S S + AKR RTT +QL+ L+A F P E++AQ TGL+
Sbjct: 184 ADLAATTGTSVGTSSNGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLN 243
Query: 740 KRVTQVWFQNSRARQKK 756
RV QVWFQN R+++++
Sbjct: 244 MRVIQVWFQNRRSKERR 260
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 42 GADSTDHTDSESSHSKSKAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGL 99
GAD T + S + AKR RTT +QL+ L+A F P E++AQ TGL
Sbjct: 183 GADLAATTGTSVGTSSNGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGL 242
Query: 100 SKRVTQVWFQNSRARQK--KHLHTGKMKSSQNRPK 132
+ RV QVWFQN R++++ K L G + R +
Sbjct: 243 NMRVIQVWFQNRRSKERRIKQLRFGAFRPGSRRAR 277
>gi|405971991|gb|EKC36790.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 343
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLC-----KS 671
A C+ C + +++V +A+ +VYH CF C C +QL G+ A+ + ++ C K
Sbjct: 68 ASCNGCGMFVIPTEFVMRAKGYVYHQQCFNCIECGQQLRQGDHCAIKDGQLFCGIDFEKE 127
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
+ + + SD D ES K KR RT T Q + ++ F+L+ P + E+
Sbjct: 128 MNMMALSPRSDGSDSYEDGESDCGK-HPKRPRTILTTSQRRKFKSAFELNPKPCRKVREQ 186
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A TGLS RV QVWFQN RA+ KK
Sbjct: 187 LAAETGLSVRVVQVWFQNQRAKVKK 211
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 37 NPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 96
+P G+DS + D ES K KR RT T Q + ++ F+L+ P + E++A
Sbjct: 134 SPRSDGSDS--YEDGESDCGK-HPKRPRTILTTSQRRKFKSAFELNPKPCRKVREQLAAE 190
Query: 97 TGLSKRVTQVWFQNSRARQKK 117
TGLS RV QVWFQN RA+ KK
Sbjct: 191 TGLSVRVVQVWFQNQRAKVKK 211
>gi|397647869|gb|EJK77893.1| hypothetical protein THAOC_00242, partial [Thalassiosira oceanica]
Length = 161
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 164 QIVTEKRFLGGVIGNGDEKKNYVKEKVNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEW 223
Q+ KR++GG IG+ D +++ KV W +++L+ AA + PQ A++ +T+SLQCEW
Sbjct: 26 QVTQGKRYVGGFIGSEDALSEWIEPKVEDWTFAIERLANAAVRYPQTAYTGLTRSLQCEW 85
Query: 224 AFLQRVVNHCQDEYIPLREIIHSTLVPSIF---EHEISSSEHELFHLPTRFGGLGINDPV 280
++ RVV + PL + I +P++ + EI L + GGL I +PV
Sbjct: 86 QYICRVVEGAERYLEPLEKAIREEFLPALLGVDKAEIDDDLRNLIAHSVKNGGLAIPNPV 145
Query: 281 ETAQHAFAVTSEKCKV 296
E A + + E V
Sbjct: 146 EAAPLLYKSSVEASSV 161
>gi|397580566|gb|EJK51630.1| hypothetical protein THAOC_29182 [Thalassiosira oceanica]
Length = 716
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Query: 103 VTQVWFQNSRARQKKHLHTGKMKSS------QNRPKYGYYPEPNKSFLVI--KPQFLEEA 154
+ +WF A + H+ + ++ + ++ PKYGYYP+P KSF V + + +
Sbjct: 413 ILALWF----ADDEGHVGSARLNAQCLAYLVEHGPKYGYYPKPVKSFHVCMEADEAVAKQ 468
Query: 155 SLLFHDLHVQIVTEKRFLGGVIGNGDEKKNYVKEKVNQWIDCVKK-LSEAAKKSPQAAFS 213
L L +Q V KR+LGG +G+ + K+ YV KV W ++ L+E AK PQ+A +
Sbjct: 469 EFLSRGLELQFVRGKRYLGGHVGSKESKEQYVNSKVEGWCTSLRALLAEIAKTHPQSAHA 528
Query: 214 VVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVPSIF 253
T LQ +W ++ RV+ PL +I +P++
Sbjct: 529 AFTFCLQHKWMYMCRVIPGIAQLLEPLERVIREVWIPALL 568
>gi|270002858|gb|EEZ99305.1| LIM homeobox transcription factor 1, beta 2 [Tribolium castaneum]
Length = 353
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F KC C IA + V +A ++++HL CF C C +L G+ + + + ++ C+
Sbjct: 52 RLFVKKCLACSERIAPEELVMRASENIFHLRCFVCVVCGIRLQKGDLYVIKQGQLFCRID 111
Query: 673 Y---LELVDG---GTTSSDDGADSESSHSKSKA-KRVRTTFTEEQLQVLQANFQLDSNPD 725
Y +E++ G G D+ S +H + KR RT T +Q + +A+F++ P
Sbjct: 112 YEKEVEMMQGFGHGEFICDELLPSSRAHDGRRGPKRPRTILTTQQRRAFKASFEVSPKPC 171
Query: 726 GQDLERIAQITGLSKRVTQVWFQN 749
+ E +A+ TGLS R+ QVWFQN
Sbjct: 172 RKVREALAKDTGLSVRIVQVWFQN 195
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S + + KR RT T +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN
Sbjct: 136 SRAHDGRRGPKRPRTILTTQQRRAFKASFEVSPKPCRKVREALAKDTGLSVRIVQVWFQN 195
>gi|345306379|ref|XP_001506055.2| PREDICTED: LIM/homeobox protein Lhx9-like [Ornithorhynchus
anatinus]
Length = 303
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 623 CRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVD---- 678
C G S + A D +HL C C CK L + + + CK Y +
Sbjct: 79 CGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRMFSVQRC 138
Query: 679 -----GGTTSSDDGADSESSH---------SKSKAKRVRTTFTEEQLQVLQANFQLDSNP 724
G + ++E+ H K KR+RT+F QL+ +++ F ++ NP
Sbjct: 139 ARCHHGISXXXXXCNENEADHLDRDQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNP 198
Query: 725 DGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
D +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 199 DAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 232
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 43 ADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
AD D D + K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 157 ADHLDR-DQQPYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 215
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 216 VLQVWFQNARAKFRRNL 232
>gi|195440768|ref|XP_002068212.1| GK12807 [Drosophila willistoni]
gi|194164297|gb|EDW79198.1| GK12807 [Drosophila willistoni]
Length = 554
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---L 674
+C C IA + V + ++V+HL CFAC C L GE++ + + ++ C+ Y +
Sbjct: 267 RCLGCGHKIAHDELVMRCHENVFHLKCFACVVCGSLLKKGEQYVVKQGQLFCRFDYEKEV 326
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
E++ G SDD + + KR RT +Q + +A+F++ P + E +A+
Sbjct: 327 EMLQGYDFYSDDIFPPKMD-GRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAK 385
Query: 735 ITGLSKRVTQVWFQNSR 751
TGLS R+ QVWFQN R
Sbjct: 386 ETGLSLRIVQVWFQNQR 402
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
KR RT +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN R
Sbjct: 350 PKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKETGLSLRIVQVWFQNQR 402
>gi|357617942|gb|EHJ71081.1| insulinprotein enhancer protein isl [Danaus plexippus]
Length = 273
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 77/173 (44%), Gaps = 39/173 (22%)
Query: 634 KARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHYLELVDGGTTS--------- 683
+A+ +YH+ CF C AC RQL G+EFAL E L C+ + L TS
Sbjct: 2 RAKTKIYHIDCFRCCACARQLIPGDEFALREGGALYCREDHDVLEKSANTSGSSAGNAES 61
Query: 684 --------------------SDDGADSESSHSK---------SKAKRVRTTFTEEQLQVL 714
SD G++S S S K RVRT E+QL L
Sbjct: 62 NNNTTLSNNNSHHPHELGSMSDSGSESGSHKSGRARAGAAADGKPTRVRTVLNEKQLHTL 121
Query: 715 QANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQ 767
+ + + PD E++ ++TGLS RV +VWFQN R + KK KM+ Q
Sbjct: 122 RTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKTIQLKMQMQQ 174
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 105 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 164
Query: 119 LHTGKMKSSQNR 130
KM+ Q +
Sbjct: 165 TIQLKMQMQQEK 176
>gi|189234898|ref|XP_967153.2| PREDICTED: similar to lim homeobox protein, partial [Tribolium
castaneum]
Length = 368
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F KC C IA + V +A ++++HL CF C C +L G+ + + + ++ C+
Sbjct: 56 RLFVKKCLACSERIAPEELVMRASENIFHLRCFVCVVCGIRLQKGDLYVIKQGQLFCRID 115
Query: 673 Y---LELVDG---GTTSSDDGADSESSHSKSKA-KRVRTTFTEEQLQVLQANFQLDSNPD 725
Y +E++ G G D+ S +H + KR RT T +Q + +A+F++ P
Sbjct: 116 YEKEVEMMQGFGHGEFICDELLPSSRAHDGRRGPKRPRTILTTQQRRAFKASFEVSPKPC 175
Query: 726 GQDLERIAQITGLSKRVTQVWFQN 749
+ E +A+ TGLS R+ QVWFQN
Sbjct: 176 RKVREALAKDTGLSVRIVQVWFQN 199
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S + + KR RT T +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN
Sbjct: 140 SRAHDGRRGPKRPRTILTTQQRRAFKASFEVSPKPCRKVREALAKDTGLSVRIVQVWFQN 199
>gi|332029131|gb|EGI69142.1| LIM/homeobox protein Awh [Acromyrmex echinatior]
Length = 114
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 44/46 (95%), Gaps = 2/46 (4%)
Query: 81 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 126
+DSNPDGQDLERIAQ+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 1 MDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 44
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 44/46 (95%), Gaps = 2/46 (4%)
Query: 720 LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKS 765
+DSNPDGQDLERIAQ+TGLSKRVTQVWFQNSRARQKK H+GK+K+
Sbjct: 1 MDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRARQKK--HSGKIKT 44
>gi|195376251|ref|XP_002046910.1| GJ12228 [Drosophila virilis]
gi|194154068|gb|EDW69252.1| GJ12228 [Drosophila virilis]
Length = 564
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 20/166 (12%)
Query: 592 GLMYIRV---RILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACE 648
G +Y R+ R+ L+ R C C IA+ + V +++++++HL CFAC
Sbjct: 257 GKLYCRIDYERLYLRNR-------------CLGCGHKIAADELVMRSQENIFHLKCFACV 303
Query: 649 ACKRQLSTGEEFALHEDRVLCKSHY---LELVDGGTTSSDDGADSESSHSKSKAKRVRTT 705
C L GE++ + + ++ C+ Y +E++ G DD + + KR RT
Sbjct: 304 VCGALLKKGEQYVVKQGQLFCRFDYEKEVEMLQGYDYYGDDLFPPKMD-GRRGPKRPRTI 362
Query: 706 FTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 751
+Q + +A+F++ P + E +A+ TGLS R+ QVWFQN R
Sbjct: 363 LNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQR 408
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
KR RT +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN R
Sbjct: 357 KRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQR 408
>gi|324529696|gb|ADY49033.1| LIM homeobox transcription factor 1-alpha, partial [Ascaris suum]
Length = 179
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F A+C++C + +D+V + + YH CF+C C L G+++ + + +V+C++ Y
Sbjct: 42 FSARCARCGITLQPTDFVFRCLNSTYHAQCFSCVYCNHPLKKGDQYLILDGQVICRADY- 100
Query: 675 ELVDGGTTSSDDGADSESSHSKSKA-KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
EL+ D E S S K KR RT +Q + + F+ + P + E++A
Sbjct: 101 ELLLCNQPMPHAYFDIEQSESNRKTPKRPRTILNTQQRRAFKLAFEKSAKPCRKVREQLA 160
Query: 734 QITGLSKRVTQVWFQNSRA 752
+ TGLS RV QVWFQN RA
Sbjct: 161 KETGLSVRVVQVWFQNQRA 179
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 48 HTDSESSHSKSKA-KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
+ D E S S K KR RT +Q + + F+ + P + E++A+ TGLS RV QV
Sbjct: 113 YFDIEQSESNRKTPKRPRTILNTQQRRAFKLAFEKSAKPCRKVREQLAKETGLSVRVVQV 172
Query: 107 WFQNSRA 113
WFQN RA
Sbjct: 173 WFQNQRA 179
>gi|195126142|ref|XP_002007533.1| GI12337 [Drosophila mojavensis]
gi|193919142|gb|EDW18009.1| GI12337 [Drosophila mojavensis]
Length = 586
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 20/166 (12%)
Query: 592 GLMYIRV---RILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACE 648
G +Y R+ R+ L+ R C C IA+ + V +++++++HL CFAC
Sbjct: 273 GKLYCRIDYERLYLRNR-------------CLGCGHKIAADELVMRSQENIFHLKCFACV 319
Query: 649 ACKRQLSTGEEFALHEDRVLCKSHY---LELVDGGTTSSDDGADSESSHSKSKAKRVRTT 705
C L GE++ + + ++ C+ Y +E++ G DD + + KR RT
Sbjct: 320 VCGAVLKKGEQYVVKQGQLFCRFDYEKEVEMLQGYDYYGDDLFPPKMD-GRRGPKRPRTI 378
Query: 706 FTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 751
+Q + +A+F++ P + E +A+ TGLS R+ QVWFQN R
Sbjct: 379 LNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQR 424
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
KR RT +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN R
Sbjct: 373 KRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQR 424
>gi|341898967|gb|EGT54902.1| CBN-LIM-6 protein [Caenorhabditis brenneri]
Length = 316
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
+G +C +C + +D V + YH CF+C +C+ + G+E+ + + V C++ +
Sbjct: 99 YGKRCRRCTAILLPTDIVHRVHYMYYHAHCFSCLSCQGPFNLGDEYHVFDGEVFCRNDFQ 158
Query: 675 ELVD-GGTTSSDDGADSESSHS---KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
L + T S+ D E+ S + KR RT +Q + + F+ S P + E
Sbjct: 159 SLCNYQNTISTADPMLDEAVRSDIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVRE 218
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++A TGLS RV QVWFQN RA+ KK
Sbjct: 219 QLANETGLSVRVVQVWFQNQRAKIKK 244
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 57 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
+ KR RT +Q + + F+ S P + E++A TGLS RV QVWFQN RA+ K
Sbjct: 184 RKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIK 243
Query: 117 K 117
K
Sbjct: 244 K 244
>gi|295656539|gb|ADG26732.1| Lhx1/5 [Platynereis dumerilii]
Length = 291
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC C +GI+ +D VR+AR+ V+HL CF C C++QLSTGEE + L E++ +CK
Sbjct: 56 FRRFGTKCGGCSQGISPNDLVRRARNKVFHLKCFTCMVCRKQLSTGEELYVLDENKFICK 115
Query: 671 SHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
YL G + ++ + E + K ++ + +L+ LD+ P+
Sbjct: 116 EDYLSSKLQGGSDHEENGEPEMDTKEMFEKLDNPLSDKDMILILEGEDSLDTLPN 170
>gi|157118344|ref|XP_001653181.1| lim homeobox protein [Aedes aegypti]
gi|108883304|gb|EAT47529.1| AAEL001373-PA [Aedes aegypti]
Length = 391
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLE--- 675
C C IA ++ V +A+ VYHL CF C C R L GE F+L +++C+ H LE
Sbjct: 77 CYGCGERIAPNEMVMRAKALVYHLNCFLCYTCNRPLQKGEPFSLRAGKLICQ-HDLEKDM 135
Query: 676 ---------------LVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQL 720
L +DG S + KR RT T Q + +A+F +
Sbjct: 136 YSTLHPMHPHHNQHTLFSEDDYLLEDGL--RSRDGRRGPKRPRTILTSVQRRQFKASFDV 193
Query: 721 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 194 SPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 229
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
KR RT T Q + +A+F + P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 173 KRPRTILTSVQRRQFKASFDVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 229
>gi|270009219|gb|EFA05667.1| lim1 [Tribolium castaneum]
Length = 511
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R + L C FR +G KC C +GI+ SD VRKARD V+HL CF C C++QLSTGEE
Sbjct: 119 RENKLFCRNDFFRRYGTKCGGCGQGISPSDLVRKARDKVFHLNCFTCLVCRKQLSTGEEL 178
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 179 YVLDDNKFICKDDYL 193
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T++ + S + SK + RTT +QL++L+ F P E++A+ TGL RV Q
Sbjct: 287 TENKSPDDSSAGSKRRGPRTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETGLPMRVIQ 346
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 347 VWFQNKRSKERR 358
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%)
Query: 691 ESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNS 750
+ S + SK + RTT +QL++L+ F P E++A+ TGL RV QVWFQN
Sbjct: 293 DDSSAGSKRRGPRTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETGLPMRVIQVWFQNK 352
Query: 751 RARQKK 756
R+++++
Sbjct: 353 RSKERR 358
>gi|405975209|gb|EKC39790.1| LIM/homeobox protein Lhx5 [Crassostrea gigas]
Length = 471
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ +D VR+AR+ V+HL CF C C++QLSTGEE + + E+R +CK
Sbjct: 56 FRRFGTKCAGCTQGISPNDLVRRARNKVFHLKCFTCIICRKQLSTGEELYVMDENRFICK 115
Query: 671 SHYLELVDGGTTSSDDGAD 689
Y+ G++ +D D
Sbjct: 116 EDYISSKLQGSSDIEDEGD 134
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 38 PDG--FGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 95
PDG G + D+T+ SS++ +K + RTT +QL+ L+A F P E++AQ
Sbjct: 235 PDGDRSGEEMNDNTNG-SSNAGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQ 293
Query: 96 ITGLSKRVTQVWFQNSRARQKK 117
TGL+ RV QVWFQN R+++++
Sbjct: 294 ETGLNMRVIQVWFQNRRSKERR 315
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 676 LVDGGTTSSDDGADSESSHSKSKAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 733
L G S ++ D+ + S + AKR RTT +QL+ L+A F P E++A
Sbjct: 233 LTPDGDRSGEEMNDNTNGSSNAGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLA 292
Query: 734 QITGLSKRVTQVWFQNSRARQKK 756
Q TGL+ RV QVWFQN R+++++
Sbjct: 293 QETGLNMRVIQVWFQNRRSKERR 315
>gi|397636864|gb|EJK72438.1| hypothetical protein THAOC_06033, partial [Thalassiosira oceanica]
Length = 146
Score = 82.8 bits (203), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFHD--LHVQIVTEKRFLGGVIGNGDEKKNYVKE 188
P +GY+P K +L + Q EE D L Q+ KR++GG IG+ D +++
Sbjct: 32 PDFGYFPAGAKCWLTVPKQMEEEVKQYLADNGLPWQVTQGKRYVGGFIGSEDALSEWIEP 91
Query: 189 KVNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLRE 242
KV W +++L+ AA + PQ A++ +T+SLQCEW ++ RVV + PL +
Sbjct: 92 KVEDWTFAIERLANAAVRYPQTAYTGLTRSLQCEWQYICRVVEGAERYLEPLEK 145
>gi|198469300|ref|XP_001354984.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
gi|198146805|gb|EAL32040.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
Length = 528
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 34 LDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G DS S + SK + RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRG-DSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
S + SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN
Sbjct: 238 SPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQN 297
Query: 750 SRARQKK 756
R+++++
Sbjct: 298 KRSKERR 304
>gi|194769270|ref|XP_001966729.1| GF19125 [Drosophila ananassae]
gi|190618250|gb|EDV33774.1| GF19125 [Drosophila ananassae]
Length = 500
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 34 LDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G DS S + SK + RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRG-DSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
S + SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN
Sbjct: 238 SPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQN 297
Query: 750 SRARQKK 756
R+++++
Sbjct: 298 KRSKERR 304
>gi|195012862|ref|XP_001983762.1| GH16074 [Drosophila grimshawi]
gi|193897244|gb|EDV96110.1| GH16074 [Drosophila grimshawi]
Length = 583
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---L 674
+C C IA + V +++++++HL CFAC C L GE++ + + ++ C+ Y +
Sbjct: 295 RCLGCGHKIAGDELVMRSQENIFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEV 354
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
E++ G DD + + KR RT +Q + +A+F++ P + E +A+
Sbjct: 355 EMLQGYDFYGDDLFPPKMD-GRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAK 413
Query: 735 ITGLSKRVTQVWFQNSR 751
TGLS R+ QVWFQN R
Sbjct: 414 DTGLSLRIVQVWFQNQR 430
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
KR RT +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN R
Sbjct: 379 KRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQR 430
>gi|195456664|ref|XP_002075233.1| GK16904 [Drosophila willistoni]
gi|194171318|gb|EDW86219.1| GK16904 [Drosophila willistoni]
Length = 506
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 34 LDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G DS S + SK + RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRG-DSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
S + SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN
Sbjct: 238 SPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQN 297
Query: 750 SRARQKK 756
R+++++
Sbjct: 298 KRSKERR 304
>gi|195480019|ref|XP_002101106.1| GE17432 [Drosophila yakuba]
gi|194188630|gb|EDX02214.1| GE17432 [Drosophila yakuba]
Length = 500
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 34 LDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G DS S + SK + RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRG-DSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
S + SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN
Sbjct: 238 SPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQN 297
Query: 750 SRARQKK 756
R+++++
Sbjct: 298 KRSKERR 304
>gi|194890894|ref|XP_001977402.1| GG19023 [Drosophila erecta]
gi|190649051|gb|EDV46329.1| GG19023 [Drosophila erecta]
Length = 504
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 34 LDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G DS S + SK + RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRG-DSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
S + SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN
Sbjct: 238 SPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQN 297
Query: 750 SRARQKK 756
R+++++
Sbjct: 298 KRSKERR 304
>gi|18858205|ref|NP_572505.1| Lim1, isoform A [Drosophila melanogaster]
gi|39841014|gb|AAD55417.2|AF181631_1 GH04929p [Drosophila melanogaster]
gi|6252420|dbj|BAA86224.1| dLim1 [Drosophila melanogaster]
gi|22833027|gb|AAF46413.2| Lim1, isoform A [Drosophila melanogaster]
gi|220943666|gb|ACL84376.1| Lim1-PA [synthetic construct]
gi|220953602|gb|ACL89344.1| Lim1-PA [synthetic construct]
Length = 505
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 34 LDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G DS S + SK + RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRG-DSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
S + SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN
Sbjct: 238 SPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQN 297
Query: 750 SRARQKK 756
R+++++
Sbjct: 298 KRSKERR 304
>gi|195049216|ref|XP_001992673.1| GH24084 [Drosophila grimshawi]
gi|193893514|gb|EDV92380.1| GH24084 [Drosophila grimshawi]
Length = 501
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 34 LDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G DS S + SK + RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRG-DSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
S + SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN
Sbjct: 238 SPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQN 297
Query: 750 SRARQKK 756
R+++++
Sbjct: 298 KRSKERR 304
>gi|195400977|ref|XP_002059092.1| GJ15180 [Drosophila virilis]
gi|194141744|gb|EDW58161.1| GJ15180 [Drosophila virilis]
Length = 498
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 34 LDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G DS S + SK + RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRG-DSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
S + SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN
Sbjct: 238 SPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQN 297
Query: 750 SRARQKK 756
R+++++
Sbjct: 298 KRSKERR 304
>gi|195130757|ref|XP_002009817.1| GI15570 [Drosophila mojavensis]
gi|193908267|gb|EDW07134.1| GI15570 [Drosophila mojavensis]
Length = 503
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 34 LDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G DS S + SK + RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRG-DSQAENKSPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
S + SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN
Sbjct: 238 SPDDANGSKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQN 297
Query: 750 SRARQKK 756
R+++++
Sbjct: 298 KRSKERR 304
>gi|348535176|ref|XP_003455077.1| PREDICTED: LIM/homeobox protein Lhx2-like [Oreochromis niloticus]
Length = 417
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 63/209 (30%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 128 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCSKMLTTGDHFGMKDSLVYCR 187
Query: 671 SHYLELVDGGTTSSDDGAD-------------------SESSHSKSKAKRVRTTFTEEQL 711
H+ L+ G + + AD S + K + ++ ++ +L
Sbjct: 188 LHFETLIQGEYETHFNHADVVQHKGLGPANTLGLSYFSSVGTVQKGRPRKRKSPGPGAEL 247
Query: 712 QVLQANFQLDSNPDGQDLER---------------------------------------- 731
A + N DG+ ++R
Sbjct: 248 AAYNAALSCNEN-DGESMDRDSQYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 306
Query: 732 --IAQITGLSKRVTQVWFQNSRARQKKHL 758
+AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 307 KQLAQKTGLTKRVLQVWFQNARAKFRRNL 335
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 10/132 (7%)
Query: 10 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTE 69
K + ++ ++ +L A + N DG D DS+ S S+ K KR+RT+F
Sbjct: 232 KGRPRKRKSPGPGAELAAYNAALSCNEN-DGESMDR----DSQYSSSQ-KTKRMRTSFKH 285
Query: 70 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL----HTGKMK 125
QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L TG K
Sbjct: 286 HQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQESTGVDK 345
Query: 126 SSQNRPKYGYYP 137
+S G P
Sbjct: 346 ASDGSTLQGGTP 357
>gi|340383359|ref|XP_003390185.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-Y-like [Amphimedon queenslandica]
Length = 394
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 58/91 (63%)
Query: 411 LNCKKGGLVKHGHDYLRDECIMMASYAWNGIVKEPIMRDSSSTSPALIADFKINGVWEAG 470
++CKKGGLV H+ +RD +++ W+ +KEP+++++SS ALI D GVW+
Sbjct: 43 MDCKKGGLVTQRHNEVRDLLYDLSALVWHQTIKEPVIQEASSARAALIGDISARGVWQPQ 102
Query: 471 GTAFFDNRIVNADAPSYSSQTWNTIAKRHAQ 501
TA FD R++++DAPSY S++ + +Q
Sbjct: 103 ATAVFDIRVIDSDAPSYLSKSVKNVNSLSSQ 133
>gi|328705917|ref|XP_001945631.2| PREDICTED: LIM/homeobox protein Lhx5-like [Acyrthosiphon pisum]
Length = 555
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 8/97 (8%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
+R +G KC+ C +GI+ +D VRKARD V+HL CF C C++QLSTGEE + L +++ +CK
Sbjct: 169 YRRYGKKCNGCAQGISPTDLVRKARDKVFHLNCFTCMICRKQLSTGEELYVLEDNKFICK 228
Query: 671 SHYLELVDGG-------TTSSDDGADSESSHSKSKAK 700
Y+ +G + S D+ D +S+S S K
Sbjct: 229 DDYISGKNGQGIDSLTYSGSEDEDDDETTSNSISSTK 265
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 46 TDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
T++ + +S SK + RTT +QL++L+ F P E++A+ T L RV Q
Sbjct: 329 TENKSPDDGNSGSKRRGPRTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETSLPMRVIQ 388
Query: 106 VWFQNSRARQKK 117
VWFQN R+++++
Sbjct: 389 VWFQNKRSKERR 400
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 683 SSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRV 742
S DDG +S SK + RTT +QL++L+ F P E++A+ T L RV
Sbjct: 333 SPDDG------NSGSKRRGPRTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETSLPMRV 386
Query: 743 TQVWFQNSRARQKK 756
QVWFQN R+++++
Sbjct: 387 IQVWFQNKRSKERR 400
>gi|397599859|gb|EJK57529.1| hypothetical protein THAOC_22414, partial [Thalassiosira oceanica]
Length = 271
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 128 QNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHD--LHVQIVTEKRFLGGVIGNGDEKKNY 185
Q P +GY+P K +L + + EE D L Q+ KR++GG IG+ D +
Sbjct: 152 QIGPDFGYFPAGAKCWLTVPKRMEEEVKQYLADNGLPWQVTQGKRYVGGFIGSEDALSEW 211
Query: 186 VKEKVNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREII 244
++ KV W +++L+ AA + PQ A++ +T+SLQCEW ++ RVV + PL + I
Sbjct: 212 IEPKVEDWTFAIERLANAAVRYPQTAYTGLTRSLQCEWQYICRVVEGAERYLEPLEKAI 270
>gi|157118342|ref|XP_001653180.1| lim homeobox protein [Aedes aegypti]
gi|108883303|gb|EAT47528.1| AAEL001380-PA [Aedes aegypti]
Length = 387
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---L 674
+C C I + + V +A D+V+HL CF C C +L G+++ + + ++ C+ Y +
Sbjct: 185 RCLGCGEKIGADELVMRALDNVFHLKCFICVVCGVRLQKGDQYVIKQSQLFCRPDYEKEV 244
Query: 675 ELVDGGTTSSDDGADSESSHSKSKA----KRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
E++ G + DD + ++ KR RT T +Q + +A+F++ P + E
Sbjct: 245 EMLQG--YNYDDYCCDDIFQTRIDGRRGPKRPRTILTTQQRRAFKASFEISPKPCRKIRE 302
Query: 731 RIAQITGLSKRVTQVWFQNSRA 752
+A+ TGLS R+ QVWFQN RA
Sbjct: 303 GLAKDTGLSIRIVQVWFQNQRA 324
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 22 EEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQL 81
E+++++LQ N D + D T + + KR RT T +Q + +A+F++
Sbjct: 241 EKEVEMLQG-----YNYDDYCCDDIFQTRIDG---RRGPKRPRTILTTQQRRAFKASFEI 292
Query: 82 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 113
P + E +A+ TGLS R+ QVWFQN RA
Sbjct: 293 SPKPCRKIREGLAKDTGLSIRIVQVWFQNQRA 324
>gi|405971990|gb|EKC36789.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 319
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK-SHY 673
F +CS C I + VR+ + YHL CF C C L G EF + + ++ C+ H
Sbjct: 70 FRGRCSGCGFSINPHELVRRVYSNTYHLPCFRCVECGHVLQDGNEFYIRDGQIFCRYDHD 129
Query: 674 LEL-VDGGTTSSDDGADSESSHS---KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
E + + D+ +DS +AKR RT T Q + + F+ + P +
Sbjct: 130 KEFHIPSFSPKVDEDSDSYEDFDLDVDRQAKRPRTILTTSQRRKFKQAFEANPKPCRKVR 189
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKKHLHTG 761
E++A TGL+ RV QVWFQN RA+ KK G
Sbjct: 190 EQLAAETGLTIRVVQVWFQNQRAKVKKTSRKG 221
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
+AKR RT T Q + + F+ + P + E++A TGL+ RV QVWFQN RA+ KK
Sbjct: 158 QAKRPRTILTTSQRRKFKQAFEANPKPCRKVREQLAAETGLTIRVVQVWFQNQRAKVKKT 217
Query: 119 LHTG 122
G
Sbjct: 218 SRKG 221
>gi|345326124|ref|XP_001508297.2| PREDICTED: hypothetical protein LOC100077000 [Ornithorhynchus
anatinus]
Length = 553
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 23/133 (17%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 264 FAAKCSGCLEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKSDYE 323
Query: 675 ELVDGGTTSSDDGADS---------------ESSHSKS--------KAKRVRTTFTEEQL 711
+ D ++ S D +DS ++S K + KR RT T +Q
Sbjct: 324 KEKDLLSSVSPDESDSVKSDDEDGDVKPTKGQASQGKGSDDGKDPRRPKRPRTILTTQQR 383
Query: 712 QVLQANFQLDSNP 724
+ +A+F++ S P
Sbjct: 384 RAFKASFEVSSKP 396
>gi|241688853|ref|XP_002411721.1| LIM domain containing protein [Ixodes scapularis]
gi|215504541|gb|EEC14035.1| LIM domain containing protein [Ixodes scapularis]
Length = 173
Score = 82.4 bits (202), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 46/61 (75%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FGAKCSKC +G + +D+V +AR H+YHL CF C+AC RQL G+EFAL +D + C++
Sbjct: 83 RLFGAKCSKCQQGFSRTDFVMRARQHIYHLDCFRCQACARQLIPGDEFALRDDGLFCRAD 142
Query: 673 Y 673
+
Sbjct: 143 H 143
>gi|410929509|ref|XP_003978142.1| PREDICTED: LIM/homeobox protein Lhx2-like [Takifugu rubripes]
Length = 417
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 63/209 (30%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 128 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCSKMLTTGDHFGMKDSLVYCR 187
Query: 671 SHYLELVDGGTTSSDDGAD-------------------SESSHSKSKAKRVRTTFTEEQL 711
H+ LV G + + AD + K + ++ ++ +L
Sbjct: 188 LHFETLVQGEYQTHFNHADVVPHKGLGPANTLGLSYFNGVGTVQKGRPRKRKSPGPGAEL 247
Query: 712 QVLQANFQLDSNPDGQDLER---------------------------------------- 731
A + N DG+ ++R
Sbjct: 248 AAYNAALSCNEN-DGESMDRDSQYSSTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 306
Query: 732 --IAQITGLSKRVTQVWFQNSRARQKKHL 758
+AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 307 KQLAQKTGLTKRVLQVWFQNARAKFRRNL 335
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 10/132 (7%)
Query: 10 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTE 69
K + ++ ++ +L A + N DG D DS+ S S K KR+RT+F
Sbjct: 232 KGRPRKRKSPGPGAELAAYNAALSCNEN-DGESMDR----DSQYS-STQKTKRMRTSFKH 285
Query: 70 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL----HTGKMK 125
QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L TG K
Sbjct: 286 HQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQESTGVDK 345
Query: 126 SSQNRPKYGYYP 137
+S + G P
Sbjct: 346 ASDSSTLQGGTP 357
>gi|195998992|ref|XP_002109364.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
gi|190587488|gb|EDV27530.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
Length = 208
Score = 82.4 bits (202), Expect = 9e-13, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALH-EDRVLCKS 671
+ FG KC C GI + V + YH+ C C C RQ G+++ + E + +CK
Sbjct: 65 KRFGRKCQGCNLGILPDEMVYRLHGSCYHINCLLCIVCSRQFKVGDKYYISDEGKPICKE 124
Query: 672 HYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y D A KR RT+ T++QL++L + +++ P E
Sbjct: 125 DY------------DVAIMYFQLHHPNLKRPRTSITQQQLKMLNSVYRIKPRPSRITREM 172
Query: 732 IAQITGLSKRVTQVWFQNSRARQKKHL 758
IA GL RV QVWFQN RA+ K+ +
Sbjct: 173 IATKVGLDLRVVQVWFQNKRAKDKRSI 199
Score = 53.9 bits (128), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
KR RT+ T++QL++L + +++ P E IA GL RV QVWFQN RA+ K+ +
Sbjct: 141 KRPRTSITQQQLKMLNSVYRIKPRPSRITREMIATKVGLDLRVVQVWFQNKRAKDKRSI 199
>gi|410921390|ref|XP_003974166.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Takifugu
rubripes]
Length = 354
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 71/168 (42%), Gaps = 26/168 (15%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
F C C I+ ++ V +A V+HL CF C C +L TG+ E ++LC
Sbjct: 62 FAVHCGGCAEAISHTELVMRAGAAVFHLHCFTCSVCSCRLQTGDRCVFREGQLLCAREDY 121
Query: 675 ELVDGGTTSSDDGADSESS--------------------------HSKSKAKRVRTTFTE 708
TSS G + + KR RT T
Sbjct: 122 HRCLASPTSSYTGTSCDGDDEDEEEEKEEEEESAAAADRTARTAEQDSKRPKRPRTILTT 181
Query: 709 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 182 QQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 229
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 171 RPKRPRTILTTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 229
>gi|340372449|ref|XP_003384756.1| PREDICTED: hypothetical protein LOC100635016 [Amphimedon
queenslandica]
Length = 344
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 134/344 (38%), Gaps = 60/344 (17%)
Query: 238 IPLREIIHSTLVPSIFE-HEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKV 296
+PL +I TL+P + + S + +L LP R GGL I +P T
Sbjct: 35 LPLETVISKTLIPQLTGLYHPSDTIRKLLSLPYRLGGLNITNPC---------THLPSSD 85
Query: 297 LVDSLLKQEQLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEG 356
+ D L +Q+++ K T + + + S + +E
Sbjct: 86 ITDCLGRQQEI-------------------KSTVTSQHHDSLYS---------IDLCIEK 117
Query: 357 QSSHWLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKG 416
+S+W++ +P SS F L FRDA+ LRY + P+ C CG S+ HAL+C
Sbjct: 118 GASNWVSALPLSSLGFHLHKSAFRDAIHLRYGWDILDTPSDCT-CGQHFSLDHALSCPAR 176
Query: 417 GLVKHGHDYLRDECIMMASYAWNGIVKEPIMRDSSSTSPALIADFKINGVWEAGGTAFFD 476
G H+ +RD + S + EP ++ I G F
Sbjct: 177 GFPSIRHNEVRDITATLLSEVCANVEIEPHLQ-------------PITG-------EHFP 216
Query: 477 NRIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDL-RASFTPLVCSTDGALHLEFHS 535
R N D + N + +K +Y + +SF PLV S G + +
Sbjct: 217 LRTANCDQNARLDVVANGVWXXXXNDKRRQYEQRVTQVEHSSFVPLVFSATGGMSKFTSN 276
Query: 536 FLKRIALVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTR 579
F + +A LS K + L L R F++L++ + +RG R
Sbjct: 277 FYRHLAQKLSTKHDEHLSMTLGLLCCRLSFALLRSAIMCIRGVR 320
>gi|321455236|gb|EFX66374.1| hypothetical protein DAPPUDRAFT_11288 [Daphnia pulex]
Length = 349
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
FR +G KC C +G++ +D VRKARD VYHL CF C C+RQLSTGEE L +D R LCK
Sbjct: 53 FRRYGTKCGGCGQGLSPTDLVRKARDKVYHLRCFTCALCRRQLSTGEELYLLDDARFLCK 112
Query: 671 SHYL 674
++
Sbjct: 113 EDFI 116
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 677 VDG---GTTSSDDGADSESSH---SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
VDG G + SD+ ++S+S + SK + RTT +QL++L+ F P E
Sbjct: 194 VDGDGEGESRSDNPSESKSPDEGGAGSKRRGPRTTIKAKQLEILKNAFSQTPKPTRHIRE 253
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
++A+ TGL RV QVWFQN R+++++
Sbjct: 254 QLAKETGLPMRVIQVWFQNKRSKERR 279
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 39 DGFGADSTDHTDSESSHSK----SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 94
DG G +D+ S + SK + RTT +QL++L+ F P E++A
Sbjct: 197 DGEGESRSDNPSESKSPDEGGAGSKRRGPRTTIKAKQLEILKNAFSQTPKPTRHIREQLA 256
Query: 95 QITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKYG 134
+ TGL RV QVWFQN R+++++ ++ S RP +G
Sbjct: 257 KETGLPMRVIQVWFQNKRSKERR---LKQLTSMGLRPYFG 293
>gi|397615933|gb|EJK63725.1| hypothetical protein THAOC_15604 [Thalassiosira oceanica]
Length = 735
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 414 KKGGLVKHGHDYLRDECIMMASYA-------------WNGIVKEPIMRDSSSTSPALI-- 458
K GGLV HD RDE +AS A + G EP+ R ++ S
Sbjct: 49 KTGGLVVLRHDDCRDEFGDIASKATTPSRVTTEPLIHYGG--NEPVTRQANGASNTSNNN 106
Query: 459 ----------ADFKINGVWEAGGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKYN 508
D I+G + TA D I + DAPSY Q + ++ A+ K KY
Sbjct: 107 NSSTRGGEERGDLAIHGFVQRSKTAILDFVITDTDAPSYGHQPSKKVLEKAAKRKKDKYL 166
Query: 509 TAAEDLRASFTPLVCSTDGALHLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEFSIL 568
A + R F P+ S DG E + KR+A +L+ KW + Y + +++ R SI+
Sbjct: 167 EACRERRRDFIPMAYSVDGLAGKEARAAEKRLASLLASKWDRPYSEMACFVKTRMSLSIV 226
Query: 569 KAVSLRLRGTRQIV--KPYGFDDGA 591
+ +S+ LRG+R K DDGA
Sbjct: 227 RPISMLLRGSRSSATWKRRAPDDGA 251
>gi|194747131|ref|XP_001956006.1| GF24989 [Drosophila ananassae]
gi|190623288|gb|EDV38812.1| GF24989 [Drosophila ananassae]
Length = 554
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---L 674
+C C IAS + V + ++V+HL CFAC C L GE++ + + ++ C+ Y +
Sbjct: 266 RCLGCGHKIASDELVMRCHENVFHLKCFACVVCGVLLKKGEQYVVKQGQLFCRFDYEKEV 325
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
E++ G D+ + + KR RT +Q + +A+F++ P + E +A+
Sbjct: 326 EMLQGYDFYGDELFPPKLD-GRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAK 384
Query: 735 ITGLSKRVTQVWFQNSR 751
TGLS R+ QVWFQN R
Sbjct: 385 ETGLSLRIVQVWFQNQR 401
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
KR RT +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN R
Sbjct: 350 KRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKETGLSLRIVQVWFQNQR 401
>gi|198464778|ref|XP_001353365.2| GA18112 [Drosophila pseudoobscura pseudoobscura]
gi|198149875|gb|EAL30872.2| GA18112 [Drosophila pseudoobscura pseudoobscura]
Length = 553
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---L 674
+C C +A+ + V + ++V+HL CFAC C L GE++ + + ++ C+ Y +
Sbjct: 268 RCLGCGHKVAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEV 327
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
E++ G DD + + KR RT +Q + +A+F++ P + E +A+
Sbjct: 328 EMLQGYDYYGDDLFPPKLD-GRRGPKRPRTILNTQQRRSFKASFEVSPKPCRKVRENLAK 386
Query: 735 ITGLSKRVTQVWFQNSR 751
TGLS R+ QVWFQN R
Sbjct: 387 ETGLSLRIVQVWFQNQR 403
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
KR RT +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN R
Sbjct: 352 KRPRTILNTQQRRSFKASFEVSPKPCRKVRENLAKETGLSLRIVQVWFQNQR 403
>gi|34733871|gb|AAQ81868.1| LIM homeobox gene protein 2 [Ambystoma mexicanum]
Length = 398
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Query: 47 DHTDSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 105
DH D + S+S S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV Q
Sbjct: 244 DHMDRDQSYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
Query: 106 VWFQNSRARQKKHL----HTGKMKSSQNRPKYGYYPEP 139
VWFQN+RA+ +++L +TG K+S + + G P
Sbjct: 304 VWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGP 341
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 686 DGADSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
D D + S+S S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV Q
Sbjct: 244 DHMDRDQSYSSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 303
Query: 745 VWFQNSRARQKKHL 758
VWFQN+RA+ +++L
Sbjct: 304 VWFQNARAKFRRNL 317
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 107 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCSTCNKMLTTGDHFGMKDSLVYCR 166
Query: 671 SHYLELVDG 679
H+ L+ G
Sbjct: 167 LHFESLIQG 175
>gi|357631671|gb|EHJ79140.1| lim1 [Danaus plexippus]
Length = 162
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR +G KCS C GI+ SD VRKAR+ V+HL CF C C++QLSTGEE + L +++ +CK
Sbjct: 55 FRRYGTKCSGCGHGISPSDLVRKAREKVFHLNCFTCLVCRKQLSTGEELYVLDDNKFICK 114
Query: 671 SHYL 674
YL
Sbjct: 115 EDYL 118
>gi|443701941|gb|ELU00131.1| hypothetical protein CAPTEDRAFT_168913 [Capitella teleta]
Length = 481
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
+R +G KC C GI+ +D VR+AR+ V+HL CF C C++QLSTGEE + L E++ +CK
Sbjct: 58 YRRYGTKCGGCAEGISPNDLVRRARNKVFHLKCFTCMVCRKQLSTGEELYVLDENKFICK 117
Query: 671 SHYLELVDGGTTSSDD 686
S YL G+ D+
Sbjct: 118 SDYLHTKFQGSDDEDN 133
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 50 DSESSHSKSKAKR-VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 108
D E++ K KR RTT +QL+VL++ F P E++A+ TGL RV QVWF
Sbjct: 253 DGEATGGKGSKKRGPRTTIKAKQLEVLKSAFAATPKPTRHIREQLAKETGLPMRVIQVWF 312
Query: 109 QNSRARQKK 117
QN R+++++
Sbjct: 313 QNKRSKERR 321
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 689 DSESSHSKSKAKR-VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWF 747
D E++ K KR RTT +QL+VL++ F P E++A+ TGL RV QVWF
Sbjct: 253 DGEATGGKGSKKRGPRTTIKAKQLEVLKSAFAATPKPTRHIREQLAKETGLPMRVIQVWF 312
Query: 748 QNSRARQKK 756
QN R+++++
Sbjct: 313 QNKRSKERR 321
>gi|355753040|gb|EHH57086.1| hypothetical protein EGM_06651, partial [Macaca fascicularis]
Length = 398
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 65/212 (30%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 165
Query: 671 SHYLELVDGGTTSSDDGADSESSHS-----------------------KSKAKRVRTTFT 707
H+ L+ G + + AD ++ S K + ++ ++
Sbjct: 166 LHFEALLQGEYPAHFNHADVAAAKSAGLGAAGANPLGLPYYNGVGTVQKGRPRKRKSPGP 225
Query: 708 EEQLQVLQANFQLDSN-----------PDGQDLERI------------------------ 732
L A + N P Q +R+
Sbjct: 226 GADLAAYNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDA 285
Query: 733 ------AQITGLSKRVTQVWFQNSRARQKKHL 758
AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 286 KDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 317
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 44 DSTDHTDSESSHSKS-KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKR 102
+ +H D + + S K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KR
Sbjct: 241 NDAEHLDRDQPYPSSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKR 300
Query: 103 VTQVWFQNSRARQKKHL 119
V QVWFQN+RA+ +++L
Sbjct: 301 VLQVWFQNARAKFRRNL 317
>gi|328723694|ref|XP_001946328.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 415
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVD 678
C C IA+ + V +A + V+H CF C C +L TG+++ + ++ C+ Y + V+
Sbjct: 98 CGSCGDHIAAGELVMRAGECVFHEQCFVCVVCGIRLCTGDQYVIKHSQLFCRPDYEKEVN 157
Query: 679 G--GTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
+ + G S + + KR RT T +Q + +A+F+L P + E +A T
Sbjct: 158 MMRDEINRNTGDWSYNHDGRRGPKRPRTILTTQQRRAFKASFELSPKPCRKVREGLAHDT 217
Query: 737 GLSKRVTQVWFQNSRA 752
GLS R+ QVWFQN RA
Sbjct: 218 GLSVRIVQVWFQNQRA 233
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 113
KR RT T +Q + +A+F+L P + E +A TGLS R+ QVWFQN RA
Sbjct: 181 KRPRTILTTQQRRAFKASFELSPKPCRKVREGLAHDTGLSVRIVQVWFQNQRA 233
>gi|47214973|emb|CAG01307.1| unnamed protein product [Tetraodon nigroviridis]
Length = 396
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 63/209 (30%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 107 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCSKMLTTGDHFGMKDSLVYCR 166
Query: 671 SHYLELVDGGTTSSDDGAD-------------------SESSHSKSKAKRVRTTFTEEQL 711
H+ LV G + AD + K + ++ ++ +L
Sbjct: 167 LHFETLVQGEYQTHFSHADVVAHKGLGPANTLGLSYFNGVGTVQKGRPRKRKSPGPGAEL 226
Query: 712 QVLQANFQLDSNPDGQDLER---------------------------------------- 731
A + N DG+ ++R
Sbjct: 227 AAYNAALSCNEN-DGESMDRDSQYSSTQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDL 285
Query: 732 --IAQITGLSKRVTQVWFQNSRARQKKHL 758
+AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 286 KQLAQKTGLTKRVLQVWFQNARAKFRRNL 314
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 10 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAKRVRTTFTE 69
K + ++ ++ +L A + N DG D DS+ S S K KR+RT+F
Sbjct: 211 KGRPRKRKSPGPGAELAAYNAALSCNEN-DGESMDR----DSQYS-STQKTKRMRTSFKH 264
Query: 70 EQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 265 HQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 314
>gi|190613352|pdb|2JTN|A Chain A, Nmr Solution Structure Of A Ldb1-Lid:lhx3-Lim Complex
Length = 182
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 115 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 174
Query: 671 SHY 673
+ Y
Sbjct: 175 ADY 177
>gi|193575711|ref|XP_001949543.1| PREDICTED: LIM/homeobox protein Lhx2-like [Acyrthosiphon pisum]
Length = 356
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 58/79 (73%), Gaps = 4/79 (5%)
Query: 680 GTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLS 739
GTT G S+ H +++ KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGLS
Sbjct: 239 GTT----GGMSQQQHQQTRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLS 294
Query: 740 KRVTQVWFQNSRARQKKHL 758
KRV QVWFQN+RA+ ++++
Sbjct: 295 KRVLQVWFQNARAKWRRNI 313
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 54/69 (78%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
S+ H +++ KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGLSKRV QVWFQN
Sbjct: 245 SQQQHQQTRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQVWFQN 304
Query: 111 SRARQKKHL 119
+RA+ ++++
Sbjct: 305 ARAKWRRNI 313
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 612 FRSFGAK-CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F K C++C GI + D V +A+D VYH+ CFAC AC L G+ + + + V C+
Sbjct: 77 YRLFSIKRCARCQGGIGACDLVMRAKDLVYHVECFACYACGAVLCKGDYYGVRDGAVFCR 136
Query: 671 SHYLEL 676
Y L
Sbjct: 137 PDYERL 142
>gi|88954018|gb|ABD59002.1| LIM-homeodomain protein AmphiLim1/5 [Branchiostoma floridae]
Length = 464
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR FG KC+ C +GI +D VR+AR+ V+HL CF C AC +Q++TGEE
Sbjct: 46 RDSKLYCREDFFRRFGTKCAGCTQGILPNDLVRRARNKVFHLKCFTCAACAKQMATGEEL 105
Query: 660 FALHEDRVLCKSHYLELVDGGTTSSDDGADSES 692
F + +D+ +CK Y ++D G+D E+
Sbjct: 106 FVVDDDKFICKDCY----HNNKVTADRGSDVEA 134
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 678 DGGTTSSDDGADSESSHSKSKAKR--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQI 735
+ G+ +S DG ++ + AKR RTT +QL+ L+A F P E++AQ
Sbjct: 222 EAGSATSKDGVSGGNNENTLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQE 281
Query: 736 TGLSKRVTQVWFQNSRARQKK 756
TGL+ RV QVWFQN R+++++
Sbjct: 282 TGLNMRVIQVWFQNRRSKERR 302
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 2 ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKAK 61
A S S + ++ R T + + V N S+ + A S D ++ + AK
Sbjct: 188 ASPTSPSSAPRDEKERETARDSRDTVSSGN---SSDNEAGSATSKDGVSGGNNENTLGAK 244
Query: 62 R--VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 245 RRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 302
>gi|383853574|ref|XP_003702297.1| PREDICTED: LIM/homeobox protein Lhx5-like [Megachile rotundata]
Length = 485
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R + L C FR +G KCS C +GI+ D VRKARD V+HL CF C C++Q+STGEE
Sbjct: 46 REAKLFCREDFFRRYGTKCSGCLQGISPQDLVRKARDKVFHLNCFTCLVCRKQMSTGEEL 105
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 106 YVLDDNKFVCKQDYL 120
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K + RTT +QL++L++ F P E++A+ TGL RV QVWFQN R+++++
Sbjct: 251 KRRGPRTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR 309
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K + RTT +QL++L++ F P E++A+ TGL RV QVWFQN R+++++
Sbjct: 251 KRRGPRTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR 309
>gi|397580167|gb|EJK51473.1| hypothetical protein THAOC_29349, partial [Thalassiosira oceanica]
Length = 373
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 419 VKHGHDYLRDECIMMASYAWNGIVKEPIMRDSSSTSPALI---------ADFKINGVWEA 469
+HG D+ + + A+ A G V+ P+ +P L D I+G +
Sbjct: 66 TEHGTDWSVGQSLPGAALA--GRVESPVTTAYLGINPFLANSTRGGEERGDLAIHGFVQR 123
Query: 470 GGTAFFDNRIVNADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGAL 529
TA D I + DAPSY Q + ++ A+ K KY A + R F P+ S DG
Sbjct: 124 SKTAILDFVITDTDAPSYGHQPSKKVLEKAAKRKKDKYLEACRERRRDFIPMAYSVDGLA 183
Query: 530 HLEFHSFLKRIALVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTRQIV-KPYGFD 588
E + KR+A +L+ KW + Y + +++ R SI++++S+ LRG+R K D
Sbjct: 184 GKEARAAEKRLASLLASKWDRPYSEMACFVKTRMSLSIVRSISMLLRGSRSSAWKRRAPD 243
Query: 589 DG 590
DG
Sbjct: 244 DG 245
>gi|195160501|ref|XP_002021114.1| GL25001 [Drosophila persimilis]
gi|194118227|gb|EDW40270.1| GL25001 [Drosophila persimilis]
Length = 458
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY---L 674
+C C +A+ + V + ++V+HL CFAC C L GE++ + + ++ C+ Y +
Sbjct: 270 RCLGCGHKVAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEV 329
Query: 675 ELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQ 734
E++ G DD + + KR RT +Q + +A+F++ P + E +A+
Sbjct: 330 EMLQGYDYYGDDLFPPKLD-GRRGPKRPRTILNTQQRRSFKASFEVSPKPCRKVRENLAK 388
Query: 735 ITGLSKRVTQVWFQNSR 751
TGLS R+ QVWFQN R
Sbjct: 389 ETGLSLRIVQVWFQNQR 405
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
KR RT +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN R
Sbjct: 354 KRPRTILNTQQRRSFKASFEVSPKPCRKVRENLAKETGLSLRIVQVWFQNQR 405
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.131 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,823,898,005
Number of Sequences: 23463169
Number of extensions: 484772788
Number of successful extensions: 1319567
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9667
Number of HSP's successfully gapped in prelim test: 3494
Number of HSP's that attempted gapping in prelim test: 1283147
Number of HSP's gapped (non-prelim): 37098
length of query: 768
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 617
effective length of database: 8,816,256,848
effective search space: 5439630475216
effective search space used: 5439630475216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)