Your job contains 1 sequence.
>psy17256
GADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGFGADSTDHTDSESSHSKSKA
KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH
TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD
EKKNYVKEKVNQWIDCVKKLSEAAKKSPQAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPL
REIIHSTLVPSIFEHEISSSEHELFHLPTRFGGLGINDPVETAQHAFAVTSEKCKVLVDS
LLKQEQLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSH
WLNVIPKSSDNFDLSPVQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVK
HGHDYLRDECIMMASYAWNGIVKEPIMRDSSSTSPALIADFKINGVWEAGGTAFFDNRIV
NADAPSYSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHLEFHSFLKRI
ALVLSEKWKKMYGHVLSWLRVRTEFSILKAVSLRLRGTRQIVKPYGFDDGAGLMYIRVRI
LLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEF
ALHEDRVLCKSHYLELVDGGTTSSDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQL
DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQN
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17256
(768 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0013751 - symbol:Awh "Arrowhead" species:7227 "Dro... 589 2.8e-57 1
WB|WBGene00002987 - symbol:lim-4 species:6239 "Caenorhabd... 459 4.6e-43 1
ZFIN|ZDB-GENE-041025-1 - symbol:lhx6 "LIM homeobox 6" spe... 416 2.7e-38 1
UNIPROTKB|E2REU0 - symbol:LHX8 "Uncharacterized protein" ... 413 5.9e-38 1
UNIPROTKB|J9PBA6 - symbol:LHX8 "Uncharacterized protein" ... 413 5.9e-38 1
UNIPROTKB|E9PGE3 - symbol:LHX8 "LIM/homeobox protein Lhx8... 413 5.9e-38 1
UNIPROTKB|Q68G74 - symbol:LHX8 "LIM/homeobox protein Lhx8... 413 5.9e-38 1
UNIPROTKB|C8YLT4 - symbol:Lhx8 "LIM homeobox 8" species:9... 413 5.9e-38 1
UNIPROTKB|F1P4G9 - symbol:LHX8 "Uncharacterized protein" ... 412 7.5e-38 1
UNIPROTKB|F1NLU0 - symbol:F1NLU0 "Uncharacterized protein... 411 9.7e-38 1
UNIPROTKB|E1B8I6 - symbol:LHX6 "Uncharacterized protein" ... 411 9.7e-38 1
UNIPROTKB|E2RA99 - symbol:LHX6 "Uncharacterized protein" ... 411 9.7e-38 1
UNIPROTKB|J9P8Y1 - symbol:LHX6 "Uncharacterized protein" ... 411 9.7e-38 1
UNIPROTKB|Q9UPM6 - symbol:LHX6 "LIM/homeobox protein Lhx6... 411 9.7e-38 1
MGI|MGI:1306803 - symbol:Lhx6 "LIM homeobox protein 6" sp... 411 9.7e-38 1
RGD|1306174 - symbol:Lhx6 "LIM homeobox 6" species:10116 ... 411 9.7e-38 1
MGI|MGI:1096343 - symbol:Lhx8 "LIM homeobox protein 8" sp... 409 1.6e-37 1
UNIPROTKB|G3V6V6 - symbol:Lhx8 "RCG29002" species:10116 "... 409 1.6e-37 1
ZFIN|ZDB-GENE-031008-2 - symbol:lhx8a "LIM homeobox 8a" s... 405 4.4e-37 1
UNIPROTKB|E1BBB7 - symbol:LHX8 "Uncharacterized protein" ... 402 9.4e-37 1
UNIPROTKB|F1NL26 - symbol:F1NL26 "Uncharacterized protein... 394 7.0e-36 1
ZFIN|ZDB-GENE-060531-41 - symbol:si:ch211-236k19.2 "si:ch... 375 8.3e-34 1
ZFIN|ZDB-GENE-081105-153 - symbol:lhx8b "LIM homeobox 8b"... 371 2.3e-33 1
UNIPROTKB|F1SLQ9 - symbol:LHX6 "Uncharacterized protein" ... 338 8.6e-30 1
UNIPROTKB|O97581 - symbol:LHX3 "LIM/homeobox protein Lhx3... 286 3.6e-24 1
UNIPROTKB|F6QGM2 - symbol:LHX3 "LIM/homeobox protein Lhx3... 286 3.6e-24 1
UNIPROTKB|F1S681 - symbol:LHX4 "Uncharacterized protein" ... 281 1.2e-23 1
RGD|727956 - symbol:Lhx9 "LIM homeobox 9" species:10116 "... 175 1.3e-23 3
UNIPROTKB|Q80W90 - symbol:Lhx9 "LIM/homeobox protein Lhx9... 175 1.3e-23 3
UNIPROTKB|E2R2S5 - symbol:LHX9 "Uncharacterized protein" ... 175 1.6e-23 3
UNIPROTKB|Q9NQ69 - symbol:LHX9 "LIM/homeobox protein Lhx9... 175 1.6e-23 3
MGI|MGI:1316721 - symbol:Lhx9 "LIM homeobox protein 9" sp... 175 1.6e-23 3
UNIPROTKB|H9L2C7 - symbol:LHX4 "Uncharacterized protein" ... 280 1.6e-23 1
ZFIN|ZDB-GENE-060728-1 - symbol:lhx4 "LIM homeobox 4" spe... 285 1.8e-23 1
UNIPROTKB|F1NV70 - symbol:LHX9 "LIM/homeobox protein Lhx9... 175 2.2e-23 3
UNIPROTKB|Q58CW3 - symbol:LHX9 "LIM homeobox 9" species:9... 175 2.2e-23 3
UNIPROTKB|P53412 - symbol:LHX3 "LIM/homeobox protein Lhx3... 286 2.5e-23 1
UNIPROTKB|A0JNI8 - symbol:LHX9 "LIM/homeobox protein Lhx9... 175 3.2e-23 3
UNIPROTKB|F1S5F5 - symbol:LHX9 "Uncharacterized protein" ... 175 3.2e-23 3
UNIPROTKB|Q9UBR4 - symbol:LHX3 "LIM/homeobox protein Lhx3... 286 3.2e-23 1
UNIPROTKB|A2I8Z7 - symbol:lhx9 "LIM/homeobox protein Lhx9... 177 4.1e-23 3
UNIPROTKB|E1BXQ7 - symbol:E1BXQ7 "Uncharacterized protein... 178 4.2e-23 2
MGI|MGI:102673 - symbol:Lhx3 "LIM homeobox protein 3" spe... 286 4.3e-23 1
UNIPROTKB|G3V8E3 - symbol:Lhx3 "Protein Lhx3" species:101... 286 4.3e-23 1
ZFIN|ZDB-GENE-050417-210 - symbol:lhx9 "LIM homeobox 9" s... 172 4.4e-23 3
UNIPROTKB|G3V9E7 - symbol:Lhx3 "RCG45383, isoform CRA_b" ... 286 5.0e-23 1
UNIPROTKB|Q2TEA4 - symbol:Lhx3 "LIM homeodomain 3 protein... 286 5.3e-23 1
UNIPROTKB|A2PZF9 - symbol:lhx9 "LIM/homeobox protein Lhx9... 172 1.0e-22 3
UNIPROTKB|F1P3H6 - symbol:F1P3H6 "Uncharacterized protein... 178 1.1e-22 2
UNIPROTKB|P36200 - symbol:lhx3 "LIM/homeobox protein Lhx3... 282 1.2e-22 1
UNIPROTKB|F1MFM7 - symbol:LHX4 "Uncharacterized protein" ... 280 1.6e-22 1
UNIPROTKB|Q969G2 - symbol:LHX4 "LIM/homeobox protein Lhx4... 280 1.6e-22 1
MGI|MGI:101776 - symbol:Lhx4 "LIM homeobox protein 4" spe... 280 1.6e-22 1
UNIPROTKB|Q90881 - symbol:LHX9 "LIM/homeobox protein Lhx9... 169 1.6e-22 3
UNIPROTKB|E1BM14 - symbol:LHX2 "Uncharacterized protein" ... 179 1.7e-22 3
UNIPROTKB|E2RPC3 - symbol:LHX2 "Uncharacterized protein" ... 179 1.7e-22 3
UNIPROTKB|C4TJC6 - symbol:Lhx2 "LIM homeobox protein 2" s... 179 1.7e-22 3
WB|WBGene00000438 - symbol:ceh-14 species:6239 "Caenorhab... 270 1.9e-22 1
UNIPROTKB|P20271 - symbol:ceh-14 "Homeobox protein ceh-14... 270 1.9e-22 1
UNIPROTKB|F1PCI5 - symbol:LHX4 "Uncharacterized protein" ... 280 2.4e-22 1
UNIPROTKB|G3N0G6 - symbol:LHX2 "Uncharacterized protein" ... 179 2.5e-22 3
ZFIN|ZDB-GENE-051220-1 - symbol:lhx2b "LIM homeobox 2b" s... 177 2.6e-22 3
ZFIN|ZDB-GENE-980526-131 - symbol:lhx3 "LIM homeobox 3" s... 280 2.8e-22 1
UNIPROTKB|P50458 - symbol:LHX2 "LIM/homeobox protein Lhx2... 177 3.0e-22 3
MGI|MGI:96785 - symbol:Lhx2 "LIM homeobox protein 2" spec... 177 3.0e-22 3
UNIPROTKB|D4A380 - symbol:Lhx2 "LIM/homeobox protein Lhx2... 177 3.0e-22 3
UNIPROTKB|H7C0H1 - symbol:LHX2 "LIM/homeobox protein Lhx2... 177 3.3e-22 3
RGD|71076 - symbol:Lhx2 "LIM homeobox 2" species:10116 "R... 177 5.3e-22 3
UNIPROTKB|P36198 - symbol:Lhx2 "LIM/homeobox protein Lhx2... 177 5.3e-22 3
UNIPROTKB|D6RAK3 - symbol:ISL1 "Insulin gene enhancer pro... 176 3.0e-21 2
UNIPROTKB|P53410 - symbol:ISL2 "Insulin gene enhancer pro... 181 1.0e-20 2
UNIPROTKB|E1BM60 - symbol:ISL2 "Uncharacterized protein" ... 184 1.1e-20 2
UNIPROTKB|Q96A47 - symbol:ISL2 "Insulin gene enhancer pro... 184 1.1e-20 2
UNIPROTKB|F1RKD0 - symbol:LHX5 "Uncharacterized protein" ... 196 1.2e-20 2
UNIPROTKB|A6QQY6 - symbol:LHX5 "Uncharacterized protein" ... 196 1.2e-20 2
UNIPROTKB|E2RRP3 - symbol:LHX5 "Uncharacterized protein" ... 196 1.2e-20 2
UNIPROTKB|Q9H2C1 - symbol:LHX5 "LIM/homeobox protein Lhx5... 196 1.2e-20 2
MGI|MGI:107792 - symbol:Lhx5 "LIM homeobox protein 5" spe... 196 1.2e-20 2
RGD|71079 - symbol:Lhx5 "LIM homeobox 5" species:10116 "R... 196 1.2e-20 2
ZFIN|ZDB-GENE-091118-109 - symbol:lhx2a "LIM homeobox 2a"... 167 1.3e-20 2
UNIPROTKB|E1BQX0 - symbol:LHX5 "Uncharacterized protein" ... 195 1.6e-20 2
FB|FBgn0002023 - symbol:Lim3 "Lim3" species:7227 "Drosoph... 277 1.7e-20 2
UNIPROTKB|D6RBJ1 - symbol:ISL1 "Insulin gene enhancer pro... 179 2.2e-20 2
ZFIN|ZDB-GENE-980526-562 - symbol:isl2a "islet2a" species... 180 2.5e-20 2
MGI|MGI:109156 - symbol:Isl2 "insulin related protein 2 (... 180 3.2e-20 2
RGD|621849 - symbol:Isl2 "ISL LIM homeobox 2" species:101... 180 3.3e-20 2
UNIPROTKB|P50480 - symbol:Isl2 "Insulin gene enhancer pro... 180 3.3e-20 2
UNIPROTKB|A6H796 - symbol:ISL1 "ISL1 protein" species:991... 179 3.5e-20 2
UNIPROTKB|P61371 - symbol:ISL1 "Insulin gene enhancer pro... 179 3.5e-20 2
MGI|MGI:101791 - symbol:Isl1 "ISL1 transcription factor, ... 179 3.5e-20 2
RGD|61957 - symbol:Isl1 "ISL LIM homeobox 1" species:1011... 179 3.5e-20 2
UNIPROTKB|F1PP21 - symbol:ISL1 "Uncharacterized protein" ... 179 4.3e-20 2
ZFIN|ZDB-GENE-980526-484 - symbol:lhx5 "LIM homeobox 5" s... 192 4.3e-20 2
UNIPROTKB|F1SMF7 - symbol:ISL1 "Uncharacterized protein" ... 179 4.3e-20 2
UNIPROTKB|Q5ISK2 - symbol:Q5ISK2 "LIM homeobox protein 1"... 191 4.7e-20 2
UNIPROTKB|B7ZP59 - symbol:lhx1 "Homeobox protein" species... 191 4.7e-20 2
UNIPROTKB|P29674 - symbol:lhx1 "LIM/homeobox protein Lhx1... 191 4.7e-20 2
ZFIN|ZDB-GENE-980526-112 - symbol:isl1 "islet1" species:7... 177 4.8e-20 2
UNIPROTKB|F1NX79 - symbol:LHX1 "LIM/homeobox protein Lhx1... 191 4.9e-20 2
UNIPROTKB|P53411 - symbol:LHX1 "LIM/homeobox protein Lhx1... 191 4.9e-20 2
WARNING: Descriptions of 422 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0013751 [details] [associations]
symbol:Awh "Arrowhead" species:7227 "Drosophila melanogaster"
[GO:0007444 "imaginal disc development" evidence=IMP] [GO:0005634
"nucleus" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
EMBL:AE014296 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007444 EMBL:U82539 EMBL:AY071197
EMBL:BT025230 RefSeq:NP_523907.2 RefSeq:NP_728906.1 UniGene:Dm.6063
ProteinModelPortal:Q8IRC7 SMR:Q8IRC7 PRIDE:Q8IRC7
EnsemblMetazoa:FBtr0073156 GeneID:38451 KEGG:dme:Dmel_CG1072
UCSC:CG1072-RA CTD:38451 FlyBase:FBgn0013751 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 HOGENOM:HOG000214908 InParanoid:Q8IRC7
OMA:IHDRYLL OrthoDB:EOG42BVRJ PhylomeDB:Q8IRC7 GenomeRNAi:38451
NextBio:808729 Bgee:Q8IRC7 GermOnline:CG1072 Uniprot:Q8IRC7
Length = 275
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 111/152 (73%), Positives = 125/152 (82%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
++FGAKCSKCCRGI++SDWVR+AR+ V+HLACFAC+ C RQLSTGE+FAL +DRVLCK+H
Sbjct: 63 KNFGAKCSKCCRGISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAH 122
Query: 673 YLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
YLE V KSK KRVRTTFTEEQLQVLQANFQ+DSNPDGQDLERI
Sbjct: 123 YLETVEGGTTSSDEGCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERI 181
Query: 733 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMK 764
A +TGLSKRVTQVWFQNSRARQKKH+H GK K
Sbjct: 182 ASVTGLSKRVTQVWFQNSRARQKKHIHAGKNK 213
Score = 306 (112.8 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 58/64 (90%), Positives = 61/64 (95%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
RVRTTFTEEQLQVLQANFQ+DSNPDGQDLERIA +TGLSKRVTQVWFQNSRARQKKH+H
Sbjct: 150 RVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQKKHIHA 209
Query: 122 GKMK 125
GK K
Sbjct: 210 GKNK 213
Score = 160 (61.4 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 32/40 (80%), Positives = 34/40 (85%)
Query: 1 GADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 40
G D + H KSK KRVRTTFTEEQLQVLQANFQ+DSNPDG
Sbjct: 137 GCDGDGYH-KSKTKRVRTTFTEEQLQVLQANFQIDSNPDG 175
>WB|WBGene00002987 [details] [associations]
symbol:lim-4 species:6239 "Caenorhabditis elegans"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0001708
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0005623
GeneTree:ENSGT00700000104050 EMBL:FO081410 HSSP:P50480 EMBL:U72348
PIR:T27637 RefSeq:NP_508669.1 UniGene:Cel.665
ProteinModelPortal:G5EEA1 SMR:G5EEA1 EnsemblMetazoa:ZC64.4
GeneID:180672 KEGG:cel:CELE_ZC64.4 CTD:180672 WormBase:ZC64.4
OMA:ARQKKWH NextBio:910388 Uniprot:G5EEA1
Length = 355
Score = 459 (166.6 bits), Expect = 4.6e-43, P = 4.6e-43
Identities = 90/144 (62%), Positives = 104/144 (72%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R G KC+ C R I ++DWVR+AR++VYHLACF+C CKRQLSTGEE+AL E +LCK H
Sbjct: 162 RELGPKCASCDRTIQATDWVRRARNYVYHLACFSCNQCKRQLSTGEEYALQEGNLLCKQH 221
Query: 673 YLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 732
+LELV K+K KRVRTTF E+QL VLQ F DSNPDG DLE+I
Sbjct: 222 FLELVEGDSGVSSQ---------KAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKI 272
Query: 733 AQITGLSKRVTQVWFQNSRARQKK 756
A +TGLSKRVTQVWFQNSRARQKK
Sbjct: 273 ASMTGLSKRVTQVWFQNSRARQKK 296
Score = 229 (85.7 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 45/56 (80%), Positives = 48/56 (85%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRTTF E+QL VLQ F DSNPDG DLE+IA +TGLSKRVTQVWFQNSRARQKK
Sbjct: 241 RVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQVWFQNSRARQKK 296
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 25/38 (65%), Positives = 27/38 (71%)
Query: 3 DSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 40
DS S K+K KRVRTTF E+QL VLQ F DSNPDG
Sbjct: 229 DSGVSSQKAKTKRVRTTFAEDQLSVLQTYFNRDSNPDG 266
>ZFIN|ZDB-GENE-041025-1 [details] [associations]
symbol:lhx6 "LIM homeobox 6" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-041025-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 CTD:26468 HOGENOM:HOG000038965
HOVERGEN:HBG006261 KO:K09375 OMA:PATDQVM OrthoDB:EOG4GTKD8
EMBL:BX571668 EMBL:BC162225 EMBL:AY664403 IPI:IPI00495496
RefSeq:NP_001004015.1 UniGene:Dr.33994 STRING:Q6BDC4
Ensembl:ENSDART00000021100 GeneID:445565 KEGG:dre:445565
InParanoid:Q6BDC4 NextBio:20832189 Uniprot:Q6BDC4
Length = 375
Score = 416 (151.5 bits), Expect = 2.7e-38, P = 2.7e-38
Identities = 85/160 (53%), Positives = 104/160 (65%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 151 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 210
Query: 672 HYLELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSN 723
HY +V + K AKR RT+FT EQLQV+QA F D+N
Sbjct: 211 HYDTMVENLKRAAESGSGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 270
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL--HTG 761
PD Q L+++A +TGLS+RV QVWFQN RAR KKH H G
Sbjct: 271 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHNG 310
Score = 207 (77.9 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 40/63 (63%), Positives = 48/63 (76%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 248 RARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQ 307
Query: 120 HTG 122
H G
Sbjct: 308 HNG 310
>UNIPROTKB|E2REU0 [details] [associations]
symbol:LHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:MYWKSDQ EMBL:AAEX03004901
EMBL:AAEX03004902 Ensembl:ENSCAFT00000032488 Uniprot:E2REU0
Length = 379
Score = 413 (150.4 bits), Expect = 5.9e-38, P = 5.9e-38
Identities = 84/164 (51%), Positives = 107/164 (65%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 152 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 211
Query: 672 HY--------LELVXXXXXXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY E+ K AKR RT+FT +QLQV+QA F D+
Sbjct: 212 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDN 271
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ S+
Sbjct: 272 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 315
Score = 202 (76.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 250 RARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSP 309
Query: 122 GKMKSS 127
S+
Sbjct: 310 NHSSSA 315
>UNIPROTKB|J9PBA6 [details] [associations]
symbol:LHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AAEX03004901 EMBL:AAEX03004902
Ensembl:ENSCAFT00000043981 Uniprot:J9PBA6
Length = 295
Score = 413 (150.4 bits), Expect = 5.9e-38, P = 5.9e-38
Identities = 84/164 (51%), Positives = 107/164 (65%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 68 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 127
Query: 672 HY--------LELVXXXXXXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY E+ K AKR RT+FT +QLQV+QA F D+
Sbjct: 128 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDN 187
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ S+
Sbjct: 188 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 231
Score = 202 (76.2 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 166 RARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSP 225
Query: 122 GKMKSS 127
S+
Sbjct: 226 NHSSSA 231
>UNIPROTKB|E9PGE3 [details] [associations]
symbol:LHX8 "LIM/homeobox protein Lhx8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0021884
"forebrain neuron development" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0008585 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007611
Gene3D:2.10.110.10 GO:GO:0042475 GO:GO:0021884 KO:K09375
EMBL:AC099786 RefSeq:NP_001243043.1 UniGene:Hs.403934 GeneID:431707
KEGG:hsa:431707 CTD:431707 HGNC:HGNC:28838 GenomeRNAi:431707
IPI:IPI00480117 ProteinModelPortal:E9PGE3 SMR:E9PGE3
Ensembl:ENST00000356261 ArrayExpress:E9PGE3 Bgee:E9PGE3
Uniprot:E9PGE3
Length = 346
Score = 413 (150.4 bits), Expect = 5.9e-38, P = 5.9e-38
Identities = 84/164 (51%), Positives = 107/164 (65%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 119 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 178
Query: 672 HY--------LELVXXXXXXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY E+ K AKR RT+FT +QLQV+QA F D+
Sbjct: 179 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDN 238
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ S+
Sbjct: 239 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSST 282
Score = 202 (76.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 217 RARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSP 276
Query: 122 GKMKSS 127
S+
Sbjct: 277 NHSSST 282
>UNIPROTKB|Q68G74 [details] [associations]
symbol:LHX8 "LIM/homeobox protein Lhx8" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0021884
"forebrain neuron development" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0008585 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0007611 Gene3D:2.10.110.10 GO:GO:0042475 GO:GO:0021884
eggNOG:NOG264882 HSSP:P06601 HOGENOM:HOG000038965
HOVERGEN:HBG006261 KO:K09375 EMBL:AC099786 EMBL:BC040321
IPI:IPI00470355 RefSeq:NP_001001933.1 RefSeq:NP_001243043.1
UniGene:Hs.403934 ProteinModelPortal:Q68G74 SMR:Q68G74
STRING:Q68G74 PhosphoSite:Q68G74 DMDM:296434566 PRIDE:Q68G74
DNASU:431707 Ensembl:ENST00000294638 GeneID:431707 KEGG:hsa:431707
UCSC:uc001dgo.3 CTD:431707 GeneCards:GC01P075594 HGNC:HGNC:28838
MIM:604425 neXtProt:NX_Q68G74 PharmGKB:PA142671553
InParanoid:Q68G74 OMA:MYWKSDQ OrthoDB:EOG48WC27 GenomeRNAi:431707
NextBio:108706 ArrayExpress:Q68G74 Bgee:Q68G74 CleanEx:HS_LHX8
Genevestigator:Q68G74 Uniprot:Q68G74
Length = 356
Score = 413 (150.4 bits), Expect = 5.9e-38, P = 5.9e-38
Identities = 84/164 (51%), Positives = 107/164 (65%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 129 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 188
Query: 672 HY--------LELVXXXXXXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY E+ K AKR RT+FT +QLQV+QA F D+
Sbjct: 189 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDN 248
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ S+
Sbjct: 249 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSST 292
Score = 202 (76.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 227 RARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSP 286
Query: 122 GKMKSS 127
S+
Sbjct: 287 NHSSST 292
>UNIPROTKB|C8YLT4 [details] [associations]
symbol:Lhx8 "LIM homeobox 8" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0021884 "forebrain
neuron development" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0007611 "learning or memory"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0008585 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007611
Gene3D:2.10.110.10 GO:GO:0042475 GO:GO:0021884 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 KO:K09375 CTD:431707 OMA:MYWKSDQ
EMBL:CU929623 EMBL:FJ587986 RefSeq:NP_001159787.1 UniGene:Ssc.78542
Ensembl:ENSSSCT00000004181 GeneID:100310798 KEGG:ssc:100310798
Uniprot:C8YLT4
Length = 295
Score = 413 (150.4 bits), Expect = 5.9e-38, P = 5.9e-38
Identities = 84/164 (51%), Positives = 107/164 (65%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 68 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 127
Query: 672 HY--------LELVXXXXXXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY E+ K AKR RT+FT +QLQV+QA F D+
Sbjct: 128 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDN 187
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ S+
Sbjct: 188 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 231
Score = 202 (76.2 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 166 RARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSP 225
Query: 122 GKMKSS 127
S+
Sbjct: 226 NHSSSA 231
>UNIPROTKB|F1P4G9 [details] [associations]
symbol:LHX8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0021884 "forebrain neuron
development" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:MYWKSDQ EMBL:AADN02012385
IPI:IPI00572692 Ensembl:ENSGALT00000018546 Uniprot:F1P4G9
Length = 347
Score = 412 (150.1 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 83/156 (53%), Positives = 105/156 (67%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 120 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 179
Query: 672 HY--------LELVXXXXXXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY E+ K AKR RT+FT +QLQV+QA F D+
Sbjct: 180 HYDCMLDNLKREVENGNGVSMEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDN 239
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 240 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 275
Score = 201 (75.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 218 RARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 275
>UNIPROTKB|F1NLU0 [details] [associations]
symbol:F1NLU0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021799
"cerebral cortex radially oriented cell migration" evidence=IEA]
[GO:0021800 "cerebral cortex tangential migration" evidence=IEA]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IEA] [GO:0021877 "forebrain neuron fate commitment"
evidence=IEA] [GO:0021884 "forebrain neuron development"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050 OMA:PATDQVM
EMBL:AADN02026365 EMBL:AADN02026363 EMBL:AADN02026364
IPI:IPI00603083 Ensembl:ENSGALT00000002057 Uniprot:F1NLU0
Length = 354
Score = 411 (149.7 bits), Expect = 9.7e-38, P = 9.7e-38
Identities = 84/159 (52%), Positives = 104/159 (65%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 129 FGRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 188
Query: 672 HYLELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++ + K AKR RT+FT EQLQV+QA F D+N
Sbjct: 189 HYDTMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 248
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL--HT 760
PD Q L+++A +TGLS+RV QVWFQN RAR KKH HT
Sbjct: 249 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHT 287
Score = 206 (77.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 40/62 (64%), Positives = 48/62 (77%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 226 RARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQ 285
Query: 120 HT 121
HT
Sbjct: 286 HT 287
>UNIPROTKB|E1B8I6 [details] [associations]
symbol:LHX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0021884 "forebrain neuron
development" evidence=IEA] [GO:0021877 "forebrain neuron fate
commitment" evidence=IEA] [GO:0021853 "cerebral cortex GABAergic
interneuron migration" evidence=IEA] [GO:0021800 "cerebral cortex
tangential migration" evidence=IEA] [GO:0021799 "cerebral cortex
radially oriented cell migration" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0021884 GO:GO:0021877 GO:GO:0021853 GO:GO:0021800
GeneTree:ENSGT00700000104050 GO:GO:0048469 GO:GO:0021799 CTD:26468
KO:K09375 OMA:PATDQVM EMBL:DAAA02032024 EMBL:DAAA02032025
IPI:IPI00716181 RefSeq:NP_001179777.1 UniGene:Bt.32055
Ensembl:ENSBTAT00000007266 GeneID:541261 KEGG:bta:541261
NextBio:20879100 Uniprot:E1B8I6
Length = 392
Score = 411 (149.7 bits), Expect = 9.7e-38, P = 9.7e-38
Identities = 82/154 (53%), Positives = 102/154 (66%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++ + K AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 205 (77.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 250 RARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
>UNIPROTKB|E2RA99 [details] [associations]
symbol:LHX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 CTD:26468 KO:K09375 OMA:PATDQVM
EMBL:AAEX03006908 EMBL:AAEX03006909 RefSeq:XP_548475.3
Ensembl:ENSCAFT00000032295 GeneID:491354 KEGG:cfa:491354
Uniprot:E2RA99
Length = 363
Score = 411 (149.7 bits), Expect = 9.7e-38, P = 9.7e-38
Identities = 82/154 (53%), Positives = 102/154 (66%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++ + K AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 221 RARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
>UNIPROTKB|J9P8Y1 [details] [associations]
symbol:LHX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AAEX03006908 EMBL:AAEX03006909
Ensembl:ENSCAFT00000045524 Uniprot:J9P8Y1
Length = 353
Score = 411 (149.7 bits), Expect = 9.7e-38, P = 9.7e-38
Identities = 82/154 (53%), Positives = 102/154 (66%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 153 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 212
Query: 672 HYLELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++ + K AKR RT+FT EQLQV+QA F D+N
Sbjct: 213 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 272
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 273 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
Score = 205 (77.2 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 250 RARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 306
>UNIPROTKB|Q9UPM6 [details] [associations]
symbol:LHX6 "LIM/homeobox protein Lhx6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0021877 "forebrain
neuron fate commitment" evidence=IEA] [GO:0021884 "forebrain neuron
development" evidence=IEA] [GO:0021799 "cerebral cortex radially
oriented cell migration" evidence=ISS] [GO:0021800 "cerebral cortex
tangential migration" evidence=ISS] [GO:0021853 "cerebral cortex
GABAergic interneuron migration" evidence=ISS] [GO:0048469 "cell
maturation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 EMBL:CH471090
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021884 GO:GO:0021877 GO:GO:0021853
GO:GO:0021800 eggNOG:NOG264882 GO:GO:0048469 GO:GO:0021799
EMBL:AB031041 EMBL:AB031042 EMBL:AK126982 EMBL:AK289827
EMBL:AK297175 EMBL:AK299709 EMBL:AK313808 EMBL:AL162424
EMBL:AL136570 EMBL:BC103936 EMBL:BC103937 IPI:IPI00294419
IPI:IPI00513787 IPI:IPI00852614 IPI:IPI00853518 PIR:T46907
RefSeq:NP_001229262.1 RefSeq:NP_001229263.1 RefSeq:NP_001229264.1
RefSeq:NP_055183.2 RefSeq:NP_954629.2 UniGene:Hs.103137
ProteinModelPortal:Q9UPM6 SMR:Q9UPM6 STRING:Q9UPM6 DMDM:90185239
PRIDE:Q9UPM6 DNASU:26468 Ensembl:ENST00000340587
Ensembl:ENST00000373754 Ensembl:ENST00000373755
Ensembl:ENST00000394319 Ensembl:ENST00000541397
Ensembl:ENST00000559895 GeneID:26468 KEGG:hsa:26468 UCSC:uc004blx.4
UCSC:uc004bly.4 UCSC:uc010mvw.3 CTD:26468 GeneCards:GC09M124964
HGNC:HGNC:21735 HPA:HPA047854 MIM:608215 neXtProt:NX_Q9UPM6
PharmGKB:PA134949308 HOGENOM:HOG000038965 HOVERGEN:HBG006261
InParanoid:Q9UPM6 KO:K09375 OMA:PATDQVM OrthoDB:EOG4GTKD8
PhylomeDB:Q9UPM6 GenomeRNAi:26468 NextBio:48705 ArrayExpress:Q9UPM6
Bgee:Q9UPM6 CleanEx:HS_LHX6 Genevestigator:Q9UPM6
GermOnline:ENSG00000106852 Uniprot:Q9UPM6
Length = 363
Score = 411 (149.7 bits), Expect = 9.7e-38, P = 9.7e-38
Identities = 82/154 (53%), Positives = 102/154 (66%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++ + K AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 221 RARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
>MGI|MGI:1306803 [details] [associations]
symbol:Lhx6 "LIM homeobox protein 6" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0021799 "cerebral cortex radially
oriented cell migration" evidence=IMP] [GO:0021800 "cerebral cortex
tangential migration" evidence=IMP] [GO:0021853 "cerebral cortex
GABAergic interneuron migration" evidence=IMP] [GO:0021877
"forebrain neuron fate commitment" evidence=IGI] [GO:0021884
"forebrain neuron development" evidence=IGI] [GO:0021895 "cerebral
cortex neuron differentiation" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1306803 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021884
GO:GO:0021877 GO:GO:0021853 GO:GO:0021800 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 GO:GO:0048469 GO:GO:0021799 CTD:26468
HOGENOM:HOG000038965 HOVERGEN:HBG006261 KO:K09375 OrthoDB:EOG4GTKD8
EMBL:AJ000337 EMBL:AB031040 EMBL:AB031039 EMBL:AL773525
EMBL:BC065077 IPI:IPI00457813 IPI:IPI00457814 RefSeq:NP_001076595.1
RefSeq:NP_001076596.1 RefSeq:NP_032526.2 UniGene:Mm.12881
ProteinModelPortal:Q9R1R0 SMR:Q9R1R0 STRING:Q9R1R0 PRIDE:Q9R1R0
Ensembl:ENSMUST00000112961 Ensembl:ENSMUST00000112963
Ensembl:ENSMUST00000112966 Ensembl:ENSMUST00000148852 GeneID:16874
KEGG:mmu:16874 InParanoid:Q6P1H2 NextBio:290850 Bgee:Q9R1R0
Genevestigator:Q9R1R0 Uniprot:Q9R1R0
Length = 363
Score = 411 (149.7 bits), Expect = 9.7e-38, P = 9.7e-38
Identities = 82/154 (53%), Positives = 102/154 (66%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 124 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 183
Query: 672 HYLELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++ + K AKR RT+FT EQLQV+QA F D+N
Sbjct: 184 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 243
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 244 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 221 RARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 277
>RGD|1306174 [details] [associations]
symbol:Lhx6 "LIM homeobox 6" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021799 "cerebral
cortex radially oriented cell migration" evidence=ISO] [GO:0021800
"cerebral cortex tangential migration" evidence=ISO] [GO:0021853
"cerebral cortex GABAergic interneuron migration" evidence=ISO]
[GO:0021877 "forebrain neuron fate commitment" evidence=ISO]
[GO:0021884 "forebrain neuron development" evidence=ISO]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048469 "cell maturation" evidence=ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:1306174 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
IPI:IPI00948544 Ensembl:ENSRNOT00000068564 UCSC:RGD:1306174
Uniprot:D4A2X8
Length = 389
Score = 411 (149.7 bits), Expect = 9.7e-38, P = 9.7e-38
Identities = 82/154 (53%), Positives = 102/154 (66%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 150 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 209
Query: 672 HYLELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++ + K AKR RT+FT EQLQV+QA F D+N
Sbjct: 210 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNN 269
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
PD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 270 PDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 303
Score = 205 (77.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR KKH
Sbjct: 247 RARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH 303
>MGI|MGI:1096343 [details] [associations]
symbol:Lhx8 "LIM homeobox protein 8" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IMP] [GO:0021879 "forebrain neuron differentiation"
evidence=IMP] [GO:0021884 "forebrain neuron development"
evidence=IGI] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1096343 GO:GO:0005634 GO:GO:0008585
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007611
Gene3D:2.10.110.10 GO:GO:0042475 EMBL:CH466532 GO:GO:0021884
eggNOG:NOG264882 GeneTree:ENSGT00700000104050 HOGENOM:HOG000038965
HOVERGEN:HBG006261 KO:K09375 CTD:431707 OMA:MYWKSDQ
OrthoDB:EOG48WC27 EMBL:D49658 EMBL:AB007596 EMBL:AJ000338
EMBL:AK165733 EMBL:BC125281 EMBL:BC125283 EMBL:BC144768
IPI:IPI00132791 RefSeq:NP_034843.2 UniGene:Mm.15530
ProteinModelPortal:O35652 SMR:O35652 STRING:O35652
PhosphoSite:O35652 PRIDE:O35652 Ensembl:ENSMUST00000177846
GeneID:16875 KEGG:mmu:16875 InParanoid:Q3TMT2 NextBio:290860
Bgee:O35652 CleanEx:MM_LHX8 Genevestigator:O35652
GermOnline:ENSMUSG00000028201 Uniprot:O35652
Length = 367
Score = 409 (149.0 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 83/164 (50%), Positives = 107/164 (65%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 150 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 209
Query: 672 HY--------LELVXXXXXXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
H+ E+ K AKR RT+FT +QLQV+QA F D+
Sbjct: 210 HFDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDN 269
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ S+
Sbjct: 270 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 313
Score = 202 (76.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 248 RARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSP 307
Query: 122 GKMKSS 127
S+
Sbjct: 308 NHSSSA 313
>UNIPROTKB|G3V6V6 [details] [associations]
symbol:Lhx8 "RCG29002" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0021884 "forebrain neuron development"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:1308749 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050 EMBL:CH473952
OMA:MYWKSDQ Ensembl:ENSRNOT00000009370 Uniprot:G3V6V6
Length = 367
Score = 409 (149.0 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 83/164 (50%), Positives = 107/164 (65%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 150 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 209
Query: 672 HY--------LELVXXXXXXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
H+ E+ K AKR RT+FT +QLQV+QA F D+
Sbjct: 210 HFDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDN 269
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ S+
Sbjct: 270 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 313
Score = 202 (76.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 248 RARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSP 307
Query: 122 GKMKSS 127
S+
Sbjct: 308 NHSSSA 313
>ZFIN|ZDB-GENE-031008-2 [details] [associations]
symbol:lhx8a "LIM homeobox 8a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-031008-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006261 KO:K09375 EMBL:BC117601 EMBL:AY664404
IPI:IPI00487481 RefSeq:NP_001003980.1 UniGene:Dr.82056
STRING:Q6BDC3 GeneID:378959 KEGG:dre:378959 CTD:378959
InParanoid:Q6BDC3 NextBio:20813902 Uniprot:Q6BDC3
Length = 332
Score = 405 (147.6 bits), Expect = 4.4e-37, P = 4.4e-37
Identities = 80/156 (51%), Positives = 105/156 (67%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +C+ C R I S+DWVR+A+ + YHLACFAC +CKRQLSTGEEFAL ++RVLC+
Sbjct: 105 FRKYGTRCAHCGRNIHSNDWVRRAKGNTYHLACFACFSCKRQLSTGEEFALVDERVLCRV 164
Query: 672 HY---LELVXXXXXXXXXXXXXXXXXXKSK------AKRVRTTFTEEQLQVLQANFQLDS 722
HY L+ + + + AKR RT+FT +QLQV+QA F D+
Sbjct: 165 HYDCMLDNLKRAMENGKGVNVEGAVPSEQEVNQPKPAKRARTSFTADQLQVMQAQFAQDN 224
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 758
NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 225 NPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 260
Score = 201 (75.8 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 37/58 (63%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R RT+FT +QLQV+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 203 RARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 260
>UNIPROTKB|E1BBB7 [details] [associations]
symbol:LHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0021884 "forebrain neuron development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0007611 Gene3D:2.10.110.10 GO:GO:0042475 GO:GO:0021884
GeneTree:ENSGT00700000104050 OMA:MYWKSDQ EMBL:DAAA02008298
IPI:IPI00713787 Ensembl:ENSBTAT00000025544 Uniprot:E1BBB7
Length = 371
Score = 402 (146.6 bits), Expect = 9.4e-37, P = 9.4e-37
Identities = 84/166 (50%), Positives = 107/166 (64%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
FR +G +CS+C R I S+DWVR+A+ +VYHLACFAC +CKRQLSTGEEFAL E++VLC+
Sbjct: 150 FRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRV 209
Query: 672 HY--------LELVXXXXXXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQ--VLQANFQL 720
HY E+ K AKR RT+FT +QLQ V+QA F
Sbjct: 210 HYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQKQVMQAQFAQ 269
Query: 721 DSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSS 766
D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+ S+
Sbjct: 270 DNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSA 315
Score = 191 (72.3 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 38/68 (55%), Positives = 49/68 (72%)
Query: 62 RVRTTFTEEQLQ--VLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R RT+FT +QLQ V+QA F D+NPD Q L+++A+ TGLS+RV QVWFQN RAR KKH+
Sbjct: 248 RARTSFTADQLQKQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHV 307
Query: 120 HTGKMKSS 127
S+
Sbjct: 308 SPNHSSSA 315
>UNIPROTKB|F1NL26 [details] [associations]
symbol:F1NL26 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02026365 EMBL:AADN02026363
EMBL:AADN02026364 IPI:IPI01017195 Ensembl:ENSGALT00000038819
Uniprot:F1NL26
Length = 234
Score = 394 (143.8 bits), Expect = 7.0e-36, P = 7.0e-36
Identities = 79/149 (53%), Positives = 99/149 (66%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+ HY
Sbjct: 86 FGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYD 145
Query: 675 ELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSNPDG 726
++ + K AKR RT+FT EQLQV+QA F D+NPD
Sbjct: 146 TMIENLKRAAENGNGITLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDA 205
Query: 727 QDLERIAQITGLSKRVTQVWFQNSRARQK 755
Q L+++A +TGLS+RV QVWFQN RAR K
Sbjct: 206 QTLQKLADMTGLSRRVIQVWFQNCRARHK 234
Score = 192 (72.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
R RT+FT EQLQV+QA F D+NPD Q L+++A +TGLS+RV QVWFQN RAR K
Sbjct: 180 RARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHK 234
>ZFIN|ZDB-GENE-060531-41 [details] [associations]
symbol:si:ch211-236k19.2 "si:ch211-236k19.2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-060531-41
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:BX255921 IPI:IPI01006880
Ensembl:ENSDART00000073963 OMA:ANDWIRR Uniprot:F6P152
Length = 255
Score = 375 (137.1 bits), Expect = 8.3e-34, P = 8.3e-34
Identities = 73/153 (47%), Positives = 99/153 (64%)
Query: 614 SFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+FG KC++C ++++DW+R+A + +YHLACFAC CKRQLSTGEEF L E++VLC+ HY
Sbjct: 58 TFGIKCARCGHQVSANDWIRRAGNDIYHLACFACFFCKRQLSTGEEFGLMENQVLCRVHY 117
Query: 674 ------LELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQ 727
L+ + +KR RT+FT EQ+Q++Q +F D NPD
Sbjct: 118 DITLLNLQQLSDNGNLIHLDGALPIQYLPKASKRPRTSFTSEQIQIMQTHFIRDKNPDAA 177
Query: 728 DLERIAQITGLSKRVTQVWFQNSRARQKK-HLH 759
L+R+A TGLS+RV QVWFQN RARQK+ LH
Sbjct: 178 TLQRLADTTGLSRRVIQVWFQNCRARQKRIPLH 210
Score = 185 (70.2 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLH 120
R RT+FT EQ+Q++Q +F D NPD L+R+A TGLS+RV QVWFQN RARQK+ LH
Sbjct: 151 RPRTSFTSEQIQIMQTHFIRDKNPDAATLQRLADTTGLSRRVIQVWFQNCRARQKRIPLH 210
>ZFIN|ZDB-GENE-081105-153 [details] [associations]
symbol:lhx8b "LIM homeobox 8b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-081105-153 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050 EMBL:CR388090
IPI:IPI00635015 Ensembl:ENSDART00000061776 Uniprot:F1QST6
Length = 295
Score = 371 (135.7 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 80/159 (50%), Positives = 102/159 (64%)
Query: 612 FRSFGAKCSKCCRG-IASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
FR F CS CCR + SSDWV +A+ +VYHLACF+C +CKRQLSTGEEFAL +++LC+
Sbjct: 78 FRRFQTWCS-CCRETLHSSDWVHRAKGNVYHLACFSCFSCKRQLSTGEEFALVGEKLLCR 136
Query: 671 SHYLELVXXXX-------XXXXXXXXXXXXXXKSK-AKRVRTTFTEEQLQVLQANFQLDS 722
HY ++ K K +KR RT+FT +QLQV+QA F D+
Sbjct: 137 IHYSSMLDKLNRPAEKGKSVSPEKALAAGCEIKQKPSKRARTSFTADQLQVMQAQFVQDN 196
Query: 723 NPDGQDLERIAQITGLSKRVTQV-WFQNSRARQKKHLHT 760
NPD Q L+ +A+ TGLS+RV QV WFQN RAR KKH+ T
Sbjct: 197 NPDAQMLQSLAEQTGLSRRVIQVVWFQNCRARHKKHVST 235
Score = 190 (71.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 38/61 (62%), Positives = 47/61 (77%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV-WFQNSRARQKKHLH 120
R RT+FT +QLQV+QA F D+NPD Q L+ +A+ TGLS+RV QV WFQN RAR KKH+
Sbjct: 175 RARTSFTADQLQVMQAQFVQDNNPDAQMLQSLAEQTGLSRRVIQVVWFQNCRARHKKHVS 234
Query: 121 T 121
T
Sbjct: 235 T 235
>UNIPROTKB|F1SLQ9 [details] [associations]
symbol:LHX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0021884 "forebrain neuron
development" evidence=IEA] [GO:0021877 "forebrain neuron fate
commitment" evidence=IEA] [GO:0021853 "cerebral cortex GABAergic
interneuron migration" evidence=IEA] [GO:0021800 "cerebral cortex
tangential migration" evidence=IEA] [GO:0021799 "cerebral cortex
radially oriented cell migration" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021884 GO:GO:0021877 GO:GO:0021853
GO:GO:0021800 GeneTree:ENSGT00700000104050 GO:GO:0048469
GO:GO:0021799 OMA:PATDQVM EMBL:CU041257 Ensembl:ENSSSCT00000006081
Uniprot:F1SLQ9
Length = 362
Score = 338 (124.0 bits), Expect = 8.6e-30, P = 8.6e-30
Identities = 72/153 (47%), Positives = 98/153 (64%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 143 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 202
Query: 672 HYLELVXXXXXXXXXXXXXXXXXX-------KSK-AKRVRTTFTEEQLQVLQANFQLDSN 723
HY ++ + K AKR RT+FT EQLQV+QA F +N
Sbjct: 203 HYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQVNN 262
Query: 724 PDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
PD Q L++ A +TGLS+RV Q++ + ++++KK
Sbjct: 263 PDAQTLQK-ADMTGLSRRVLQLYIK-CKSKKKK 293
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 28/56 (50%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT+FT EQLQV+QA F +NPD Q L++ A +TGLS+RV Q++ + ++++KK
Sbjct: 240 RARTSFTAEQLQVMQAQFAQVNNPDAQTLQK-ADMTGLSRRVLQLYIK-CKSKKKK 293
>UNIPROTKB|O97581 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 EMBL:AF063245 UniGene:Ssc.26829
ProteinModelPortal:O97581 SMR:O97581 Uniprot:O97581
Length = 383
Score = 286 (105.7 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 68 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 127
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ AKR RTT T +QL+ L++ + P E
Sbjct: 128 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 173
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 174 QLSSETGLDMRVVQVWFQNRRAKEKR 199
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 144 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 199
Query: 122 GKMKSSQNRPKYGYY 136
+K R ++G Y
Sbjct: 200 --LKKDAGRQRWGQY 212
>UNIPROTKB|F6QGM2 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0000988 EMBL:AADN02026398 IPI:IPI00820696
ProteinModelPortal:F6QGM2 Ensembl:ENSGALT00000006259
ArrayExpress:F6QGM2 Uniprot:F6QGM2
Length = 214
Score = 286 (105.7 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 63/146 (43%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCK 139
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y +S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RTT T +QL+ L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 211
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 281 (104.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 62/146 (42%), Positives = 84/146 (57%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 61 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLPCFACIICNRQLATGDEFYLMEDGRLVCK 120
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y ++ AKR RTT T +QL+ L+ ++ P E
Sbjct: 121 EDY-------------ETAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVRE 167
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 168 QLSSETGLDMRVVQVWFQNRRAKEKR 193
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L+ ++ P E+++ TGL RV QVWFQN RA++K+
Sbjct: 138 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 193
Query: 122 GKMKSSQNRPKYG-YYPEPNKS 142
+K R ++G +Y +S
Sbjct: 194 --LKKDAGRHRWGQFYKSVKRS 213
>RGD|727956 [details] [associations]
symbol:Lhx9 "LIM homeobox 9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0008584 "male gonad development"
evidence=IEA;ISO] [GO:0008585 "female gonad development"
evidence=IEA;ISO] [GO:0035262 "gonad morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AY273890
RGD:727956 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0008585
GO:GO:0046872 GO:GO:0008283 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008584
Gene3D:2.10.110.10 GO:GO:0008045 eggNOG:NOG240987
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG HSSP:P61969
CTD:56956 EMBL:BC128722 EMBL:AF527619 IPI:IPI00208402
IPI:IPI00327074 RefSeq:NP_852032.1 UniGene:Rn.150335
ProteinModelPortal:Q80W90 SMR:Q80W90 STRING:Q80W90
Ensembl:ENSRNOT00000013873 GeneID:289048 KEGG:rno:289048
UCSC:RGD:727956 InParanoid:Q811Z4 NextBio:629139
ArrayExpress:Q80W90 Genevestigator:Q80W90 Uniprot:Q80W90
Length = 388
Score = 175 (66.7 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 257 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 316
Query: 758 L 758
L
Sbjct: 317 L 317
Score = 168 (64.2 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 176 AHFETLL 182
Score = 165 (63.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 260 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 317
Score = 64 (27.6 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 60 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 115
Score = 46 (21.3 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 59 PALCAGCGGKIS 70
>UNIPROTKB|Q80W90 [details] [associations]
symbol:Lhx9 "LIM/homeobox protein Lhx9" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 EMBL:AY273890 RGD:727956 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0035262 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG
HSSP:P61969 CTD:56956 EMBL:BC128722 EMBL:AF527619 IPI:IPI00208402
IPI:IPI00327074 RefSeq:NP_852032.1 UniGene:Rn.150335
ProteinModelPortal:Q80W90 SMR:Q80W90 STRING:Q80W90
Ensembl:ENSRNOT00000013873 GeneID:289048 KEGG:rno:289048
UCSC:RGD:727956 InParanoid:Q811Z4 NextBio:629139
ArrayExpress:Q80W90 Genevestigator:Q80W90 Uniprot:Q80W90
Length = 388
Score = 175 (66.7 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 257 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 316
Query: 758 L 758
L
Sbjct: 317 L 317
Score = 168 (64.2 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 116 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 175
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 176 AHFETLL 182
Score = 165 (63.1 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 260 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 317
Score = 64 (27.6 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 60 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 115
Score = 46 (21.3 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 59 PALCAGCGGKIS 70
>UNIPROTKB|E2R2S5 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0035262
"gonad morphogenesis" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0008585 GO:GO:0046872
GO:GO:0008283 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262 OMA:AAMLFHG
CTD:56956 EMBL:AAEX03005042 RefSeq:XP_848787.1 SMR:E2R2S5
Ensembl:ENSCAFT00000018021 GeneID:490257 KEGG:cfa:490257
NextBio:20863313 Uniprot:E2R2S5
Length = 397
Score = 175 (66.7 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 266 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 325
Query: 758 L 758
L
Sbjct: 326 L 326
Score = 168 (64.2 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 185 AHFETLL 191
Score = 165 (63.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 269 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 326
Score = 64 (27.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 69 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
Score = 46 (21.3 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 68 PALCAGCGGKIS 79
>UNIPROTKB|Q9NQ69 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008585
"female gonad development" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0008585 GO:GO:0046872 GO:GO:0008283 GO:GO:0043565
GO:GO:0008270 EMBL:CH471067 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 KO:K09373 GO:GO:0035262 HOVERGEN:HBG006262
OrthoDB:EOG4G4GQK OMA:AAMLFHG CTD:56956 EMBL:AJ277915 EMBL:AJ277916
EMBL:AJ277917 EMBL:AJ277918 EMBL:AJ277919 EMBL:AJ277920
EMBL:AJ296272 EMBL:AY273889 EMBL:AL590115 EMBL:BC131622
IPI:IPI00328729 IPI:IPI00396103 IPI:IPI00642345 IPI:IPI00642361
RefSeq:NP_001014434.1 RefSeq:NP_064589.2 UniGene:Hs.442578
UniGene:Hs.706475 PDB:2DMQ PDBsum:2DMQ ProteinModelPortal:Q9NQ69
SMR:Q9NQ69 STRING:Q9NQ69 PhosphoSite:Q9NQ69 DMDM:224471883
PRIDE:Q9NQ69 Ensembl:ENST00000337020 Ensembl:ENST00000367387
Ensembl:ENST00000367390 Ensembl:ENST00000367391 GeneID:56956
KEGG:hsa:56956 UCSC:uc001gui.1 UCSC:uc001guk.1
GeneCards:GC01P197881 HGNC:HGNC:14222 HPA:HPA009695 MIM:606066
neXtProt:NX_Q9NQ69 PharmGKB:PA30368 PhylomeDB:Q9NQ69
EvolutionaryTrace:Q9NQ69 GenomeRNAi:56956 NextBio:62575
ArrayExpress:Q9NQ69 Bgee:Q9NQ69 CleanEx:HS_LHX9
Genevestigator:Q9NQ69 GermOnline:ENSG00000143355 Uniprot:Q9NQ69
Length = 397
Score = 175 (66.7 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 266 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 325
Query: 758 L 758
L
Sbjct: 326 L 326
Score = 168 (64.2 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 185 AHFETLL 191
Score = 165 (63.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 269 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 326
Score = 64 (27.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 69 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
Score = 46 (21.3 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 68 PALCAGCGGKIS 79
>MGI|MGI:1316721 [details] [associations]
symbol:Lhx9 "LIM homeobox protein 9" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0008584 "male gonad development" evidence=IMP]
[GO:0008585 "female gonad development" evidence=IMP] [GO:0035262
"gonad morphogenesis" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1316721 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0035262 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG
CTD:56956 EMBL:AJ243851 EMBL:AJ243852 EMBL:AJ243853 EMBL:AJ243854
EMBL:AJ243855 EMBL:AJ243856 EMBL:AJ243857 EMBL:AC154398
EMBL:BC072623 EMBL:AF134761 EMBL:AF113518 IPI:IPI00124662
IPI:IPI00227842 IPI:IPI00626920 IPI:IPI00830796
RefSeq:NP_001020736.1 RefSeq:NP_001036042.1 RefSeq:NP_034844.1
UniGene:Mm.250732 ProteinModelPortal:Q9WUH2 SMR:Q9WUH2
IntAct:Q9WUH2 MINT:MINT-1340747 STRING:Q9WUH2 PRIDE:Q9WUH2
Ensembl:ENSMUST00000019374 Ensembl:ENSMUST00000046870
Ensembl:ENSMUST00000093486 Ensembl:ENSMUST00000112026
Ensembl:ENSMUST00000112030 GeneID:16876 KEGG:mmu:16876
UCSC:uc007cvr.1 UCSC:uc007cvs.1 UCSC:uc007cvu.1 ChiTaRS:LHX9
NextBio:290864 Bgee:Q9WUH2 CleanEx:MM_LHX9 Genevestigator:Q9WUH2
GermOnline:ENSMUSG00000019230 Uniprot:Q9WUH2
Length = 397
Score = 175 (66.7 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 266 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 325
Query: 758 L 758
L
Sbjct: 326 L 326
Score = 168 (64.2 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 185 AHFETLL 191
Score = 165 (63.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 269 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 326
Score = 64 (27.6 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 69 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
Score = 46 (21.3 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 68 PALCAGCGGKIS 79
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 280 (103.6 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 62/146 (42%), Positives = 84/146 (57%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 57 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLMEDGRLVCK 116
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y ++ AKR RTT T +QL+ L+ ++ P E
Sbjct: 117 EDY-------------ETAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVRE 163
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 164 QLSSETGLDMRVVQVWFQNRRAKEKR 189
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L+ ++ P E+++ TGL RV QVWFQN RA++K+
Sbjct: 134 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 189
Query: 122 GKMKSSQNRPKYG-YYPEPNKS 142
+K R ++G +Y +S
Sbjct: 190 --LKKDAGRHRWGQFYKSVKRS 209
>ZFIN|ZDB-GENE-060728-1 [details] [associations]
symbol:lhx4 "LIM homeobox 4" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-060728-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 KO:K09374 HOVERGEN:HBG006263 CTD:89884
OMA:LSFRDDQ EMBL:BX294388 EMBL:CR381643 EMBL:CT025732
IPI:IPI00616255 RefSeq:NP_001116445.1 UniGene:Dr.92005
Ensembl:ENSDART00000057644 GeneID:571943 KEGG:dre:571943
NextBio:20890768 Uniprot:B0S5S7
Length = 391
Score = 285 (105.4 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 85 FKRFGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLMEDGRLVCK 144
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y ++ AKR RTT T +QL+ L++ ++ P E
Sbjct: 145 EDY-------------ETAKQNDDSETGAKRPRTTITAKQLETLKSAYKNSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L++ ++ P E+++ TGL RV QVWFQN RA++K+
Sbjct: 162 RPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 217
Query: 122 GKMKSSQNRPKYG-YYPEPNK---SFLVIKPQFLEEASLLFHDLHV---QIVTEKRFLGG 174
+K R ++G +Y + S K ++A L +L QI+++ G
Sbjct: 218 --LKKDAGRHRWGQFYKSVKRNRGSSKTEKESSADDAGLSDSELSFRDDQILSDLGHANG 275
Query: 175 VIGN-GD 180
+ G+ GD
Sbjct: 276 LYGSVGD 282
>UNIPROTKB|F1NV70 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008585 "female gonad development" evidence=IEA]
[GO:0035262 "gonad morphogenesis" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:AAMLFHG IPI:IPI00682838
EMBL:AADN02033814 EMBL:AADN02033815 Ensembl:ENSGALT00000003480
ArrayExpress:F1NV70 Uniprot:F1NV70
Length = 378
Score = 175 (66.7 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 247 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 306
Query: 758 L 758
L
Sbjct: 307 L 307
Score = 165 (63.1 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 26/67 (38%), Positives = 46/67 (68%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 165
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 166 AHFESLL 172
Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 250 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 307
Score = 64 (27.6 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 50 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 105
Score = 46 (21.3 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 49 PALCAGCGGKIS 60
>UNIPROTKB|Q58CW3 [details] [associations]
symbol:LHX9 "LIM homeobox 9" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OrthoDB:EOG4G4GQK
IPI:IPI00692674 UniGene:Bt.31799 CTD:56956 EMBL:DAAA02043909
EMBL:DAAA02043910 EMBL:BT021834 IPI:IPI00903761
RefSeq:NP_001019715.1 SMR:Q58CW3 Ensembl:ENSBTAT00000017945
GeneID:515012 KEGG:bta:515012 InParanoid:Q58CW3 NextBio:20871620
Uniprot:Q58CW3
Length = 378
Score = 175 (66.7 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 247 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 306
Query: 758 L 758
L
Sbjct: 307 L 307
Score = 168 (64.2 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 165
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 166 AHFETLL 172
Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 250 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 307
Score = 63 (27.2 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C IA ++ A D +HL C C CK L + + + CK Y
Sbjct: 50 ALCAGCGGKIADRYYLL-AVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 105
Score = 43 (20.2 bits), Expect = 2.2e-23, Sum P(3) = 2.2e-23
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG+++
Sbjct: 49 PALCAGCGGKIA 60
>UNIPROTKB|P53412 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0000988 eggNOG:NOG275246
GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 EMBL:L35570 IPI:IPI00651346 PIR:I50376
RefSeq:NP_001025506.1 UniGene:Gga.91 ProteinModelPortal:P53412
SMR:P53412 STRING:P53412 Ensembl:ENSGALT00000002663 GeneID:373940
KEGG:gga:373940 CTD:8022 InParanoid:P53412 OMA:PLCAGCN
NextBio:20813472 ArrayExpress:P53412 Uniprot:P53412
Length = 395
Score = 286 (105.7 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 63/146 (43%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCK 139
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y +S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 211
Query: 122 GKMKSSQNRPKYGYY 136
+K R ++G Y
Sbjct: 212 --LKKDAGRQRWGQY 224
>UNIPROTKB|A0JNI8 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0035262
"gonad morphogenesis" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0008585 GO:GO:0046872 GO:GO:0008283 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045 eggNOG:NOG240987
GeneTree:ENSGT00680000099670 GO:GO:0035262 HOGENOM:HOG000034022
HOVERGEN:HBG006262 EMBL:BT026326 EMBL:BC126704 IPI:IPI00692674
IPI:IPI00839239 UniGene:Bt.31799 ProteinModelPortal:A0JNI8
SMR:A0JNI8 Ensembl:ENSBTAT00000043591 Ensembl:ENSBTAT00000054943
InParanoid:Q0V893 OMA:AAMLFHG Uniprot:A0JNI8
Length = 397
Score = 175 (66.7 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 266 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 325
Query: 758 L 758
L
Sbjct: 326 L 326
Score = 168 (64.2 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 185 AHFETLL 191
Score = 165 (63.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 269 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 326
Score = 63 (27.2 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C IA ++ A D +HL C C CK L + + + CK Y
Sbjct: 69 ALCAGCGGKIADRYYLL-AVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
Score = 43 (20.2 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG+++
Sbjct: 68 PALCAGCGGKIA 79
>UNIPROTKB|F1S5F5 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 GO:GO:0035262 OMA:AAMLFHG
EMBL:FP325281 Ensembl:ENSSSCT00000011930 Uniprot:F1S5F5
Length = 397
Score = 175 (66.7 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 31/61 (50%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 266 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 325
Query: 758 L 758
L
Sbjct: 326 L 326
Score = 168 (64.2 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 185 AHFETLL 191
Score = 165 (63.1 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 29/58 (50%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 269 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 326
Score = 63 (27.2 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C IA ++ A D +HL C C CK L + + + CK Y
Sbjct: 69 ALCAGCGGKIADRYYLL-AVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
Score = 43 (20.2 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG+++
Sbjct: 68 PALCAGCGGKIA 79
>UNIPROTKB|Q9UBR4 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0009887 "organ morphogenesis" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021983 GO:GO:0048839 GO:GO:0021527 EMBL:AL138781
GO:GO:0000988 GO:GO:0021521 Orphanet:226307 eggNOG:NOG275246
HOGENOM:HOG000231629 KO:K09374 GO:GO:0021520 HOVERGEN:HBG006263
CTD:8022 OMA:PLCAGCN EMBL:AF156888 EMBL:AF156889 EMBL:AH008761
EMBL:AF096169 EMBL:AF214637 EMBL:AF367089 EMBL:AF367085
EMBL:AF367086 EMBL:AF367087 EMBL:AF367088 IPI:IPI00002747
IPI:IPI00220680 RefSeq:NP_055379.1 RefSeq:NP_835258.1
UniGene:Hs.148427 ProteinModelPortal:Q9UBR4 SMR:Q9UBR4
STRING:Q9UBR4 PhosphoSite:Q9UBR4 DMDM:12643415 PRIDE:Q9UBR4
DNASU:8022 Ensembl:ENST00000371746 Ensembl:ENST00000371748
GeneID:8022 KEGG:hsa:8022 UCSC:uc004cha.3 GeneCards:GC09M139088
HGNC:HGNC:6595 MIM:221750 MIM:600577 neXtProt:NX_Q9UBR4
Orphanet:231720 PharmGKB:PA30366 OrthoDB:EOG4SBDZ0 ChiTaRS:LHX3
GenomeRNAi:8022 NextBio:30588 ArrayExpress:Q9UBR4 Bgee:Q9UBR4
CleanEx:HS_LHX3 Genevestigator:Q9UBR4 GermOnline:ENSG00000107187
GO:GO:0021526 Uniprot:Q9UBR4
Length = 397
Score = 286 (105.7 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 83 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 142
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ AKR RTT T +QL+ L++ + P E
Sbjct: 143 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 214
Query: 122 GKMKSSQNRPKYGYY 136
+K R ++G Y
Sbjct: 215 --LKKDAGRQRWGQY 227
>UNIPROTKB|A2I8Z7 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:223369
"Astyanax fasciatus" [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HOVERGEN:HBG006262 EMBL:EF175738
ProteinModelPortal:A2I8Z7 Uniprot:A2I8Z7
Length = 377
Score = 177 (67.4 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C +C + L+TG+ F + E+ V C+
Sbjct: 106 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTSCNKTLTTGDHFGMRENLVYCR 165
Query: 671 SHYLELV 677
+H+ LV
Sbjct: 166 AHFESLV 172
Score = 166 (63.5 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 29/61 (47%), Positives = 48/61 (78%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K K +RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 247 KTKXMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 306
Query: 758 L 758
+
Sbjct: 307 V 307
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 27/57 (47%), Positives = 46/57 (80%)
Query: 63 VRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ ++++
Sbjct: 251 MRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNV 307
Score = 62 (26.9 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C I S + A D +HL C C CK L + + + CK Y
Sbjct: 50 ALCAGCGSKI-SDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 105
Score = 40 (19.1 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 395 PTYCDGCGGEMS 406
P C GCG ++S
Sbjct: 49 PALCAGCGSKIS 60
>UNIPROTKB|E1BXQ7 [details] [associations]
symbol:E1BXQ7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 EMBL:AADN02026343 EMBL:AADN02026344
EMBL:AADN02026345 IPI:IPI00684197 Ensembl:ENSGALT00000001693
Uniprot:E1BXQ7
Length = 395
Score = 178 (67.7 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 35/75 (46%), Positives = 56/75 (74%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 254 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 313
Query: 758 L----HTGKMKSSQN 768
L +TG K+S +
Sbjct: 314 LLRQENTGVDKTSDS 328
Score = 169 (64.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/77 (44%), Positives = 56/77 (72%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 257 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 316
Query: 120 --HTGKMKSSQNRPKYG 134
+TG K+S + + G
Sbjct: 317 QENTGVDKTSDSTLQAG 333
Score = 166 (63.5 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 609 LICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL 668
L C R +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + ++ V
Sbjct: 101 LFCRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVY 160
Query: 669 CKSHYLELV 677
C+ H+ L+
Sbjct: 161 CRLHFETLI 169
>MGI|MGI:102673 [details] [associations]
symbol:Lhx3 "LIM homeobox protein 3" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001890
"placenta development" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IDA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IGI] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IDA] [GO:0021983
"pituitary gland development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:102673 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890 GO:GO:0021983
GO:GO:0048839 GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 GO:GO:0021520 PDB:2RGT PDBsum:2RGT PDB:2JTN PDBsum:2JTN
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN OrthoDB:EOG4SBDZ0
GO:GO:0021526 EMBL:L33776 EMBL:L38857 EMBL:L38249 EMBL:L38248
IPI:IPI00118214 IPI:IPI00263557 PIR:I59360 RefSeq:NP_001034742.1
UniGene:Mm.386765 ProteinModelPortal:P50481 SMR:P50481
MINT:MINT-7009840 STRING:P50481 PhosphoSite:P50481 PRIDE:P50481
Ensembl:ENSMUST00000028302 Ensembl:ENSMUST00000054099 GeneID:16871
KEGG:mmu:16871 EvolutionaryTrace:P50481 NextBio:290838 Bgee:P50481
CleanEx:MM_LHX3 Genevestigator:P50481 GermOnline:ENSMUSG00000026934
Uniprot:P50481
Length = 400
Score = 286 (105.7 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 217
Query: 122 GKMKSSQNRPKYGYY 136
+K R ++G Y
Sbjct: 218 --LKKDAGRQRWGQY 230
>UNIPROTKB|G3V8E3 [details] [associations]
symbol:Lhx3 "Protein Lhx3" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 RefSeq:XP_002726117.1 RefSeq:XP_002729190.1
UniGene:Rn.198623 PRIDE:G3V8E3 Ensembl:ENSRNOT00000025047
GeneID:170671 KEGG:rno:170671 NextBio:621169 Uniprot:G3V8E3
Length = 400
Score = 286 (105.7 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 86 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 145
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ AKR RTT T +QL+ L++ + P E
Sbjct: 146 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 191
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 192 QLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 217
Query: 122 GKMKSSQNRPKYGYY 136
+K R ++G Y
Sbjct: 218 --LKKDAGRQRWGQY 230
>ZFIN|ZDB-GENE-050417-210 [details] [associations]
symbol:lhx9 "LIM homeobox 9" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-050417-210 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG CTD:56956
EMBL:AB188254 EMBL:BX004971 EMBL:BX511183 EMBL:BC163023
EMBL:BC163060 EMBL:BC163073 IPI:IPI00635283 RefSeq:NP_001032320.1
UniGene:Dr.42632 ProteinModelPortal:Q1LWV4 SMR:Q1LWV4 STRING:Q1LWV4
Ensembl:ENSDART00000054807 GeneID:550405 KEGG:dre:550405
InParanoid:Q1LWV4 NextBio:20879654 Bgee:Q1LWV4 Uniprot:Q1LWV4
Length = 396
Score = 172 (65.6 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 30/61 (49%), Positives = 49/61 (80%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 266 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 325
Query: 758 L 758
+
Sbjct: 326 V 326
Score = 167 (63.8 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 184
Query: 671 SHYLELV 677
H+ L+
Sbjct: 185 VHFETLI 191
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/58 (48%), Positives = 47/58 (81%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ ++++
Sbjct: 269 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNV 326
Score = 64 (27.6 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 69 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
Score = 46 (21.3 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 68 PALCAGCGGKIS 79
>UNIPROTKB|G3V9E7 [details] [associations]
symbol:Lhx3 "RCG45383, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 OMA:PLCAGCN UniGene:Rn.198623 GeneID:170671
KEGG:rno:170671 NextBio:621169 RefSeq:XP_001059910.2
RefSeq:XP_001078243.2 Ensembl:ENSRNOT00000045587 Uniprot:G3V9E7
Length = 402
Score = 286 (105.7 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 129 (50.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 219
Query: 122 GKMKSSQNRPKYGYY 136
+K R ++G Y
Sbjct: 220 --LKKDAGRQRWGQY 232
>UNIPROTKB|Q2TEA4 [details] [associations]
symbol:Lhx3 "LIM homeodomain 3 protein b isoform"
species:9913 "Bos taurus" [GO:0048839 "inner ear development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0021521 "ventral spinal cord interneuron
specification" evidence=IEA] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021983 GO:GO:0048839
GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021520
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN GO:GO:0021526
EMBL:DAAA02032311 EMBL:AY923832 EMBL:AY923833 IPI:IPI00687531
IPI:IPI01028343 RefSeq:NP_001033709.1 UniGene:Bt.45155
Ensembl:ENSBTAT00000055580 GeneID:539213 KEGG:bta:539213
NextBio:20877851 Uniprot:Q2TEA4
Length = 403
Score = 286 (105.7 bits), Expect = 5.3e-23, P = 5.3e-23
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 129 (50.5 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L++ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 219
Query: 122 GKMKSSQNRPKYGYY 136
+K R ++G Y
Sbjct: 220 --LKKDAGRQRWGQY 232
>UNIPROTKB|A2PZF9 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:8410
"Glandirana rugosa" [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HOVERGEN:HBG006262 EMBL:AB269882
EMBL:AB269883 EMBL:AB269884 EMBL:AB269885 EMBL:AB269886
ProteinModelPortal:A2PZF9 SMR:A2PZF9 Uniprot:A2PZF9
Length = 379
Score = 172 (65.6 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 31/61 (50%), Positives = 48/61 (78%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ ++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 248 KTKRMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 307
Query: 758 L 758
L
Sbjct: 308 L 308
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 29/58 (50%), Positives = 46/58 (79%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+RT+F QL+ ++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 251 RMRTSFKHHQLRTTKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 308
Score = 157 (60.3 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 28/67 (41%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + LSTG+ F + E+ V +
Sbjct: 107 YRRFSVQRCARCHLGISASEIVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYRR 166
Query: 671 SHYLELV 677
+H+ LV
Sbjct: 167 AHFELLV 173
Score = 63 (27.2 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 15/51 (29%), Positives = 20/51 (39%)
Query: 623 CRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C G S + A D +HL C C CK L + + + CK Y
Sbjct: 56 CGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 106
Score = 51 (23.0 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 395 PTYCDGCGGEMS 406
PT C GCGG++S
Sbjct: 50 PTLCAGCGGKIS 61
>UNIPROTKB|F1P3H6 [details] [associations]
symbol:F1P3H6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007498 "mesoderm
development" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021978 "telencephalon
regionalization" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:CNENDAE EMBL:AADN02026343
EMBL:AADN02026344 EMBL:AADN02026345 IPI:IPI00597964
Ensembl:ENSGALT00000034919 Uniprot:F1P3H6
Length = 413
Score = 178 (67.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 35/75 (46%), Positives = 56/75 (74%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 272 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 331
Query: 758 L----HTGKMKSSQN 768
L +TG K+S +
Sbjct: 332 LLRQENTGVDKTSDS 346
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 34/77 (44%), Positives = 56/77 (72%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 275 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 334
Query: 120 --HTGKMKSSQNRPKYG 134
+TG K+S + + G
Sbjct: 335 QENTGVDKTSDSTLQAG 351
Score = 163 (62.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 27/67 (40%), Positives = 44/67 (65%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + ++ V C+
Sbjct: 121 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCR 180
Query: 671 SHYLELV 677
H+ L+
Sbjct: 181 LHFETLI 187
>UNIPROTKB|P36200 [details] [associations]
symbol:lhx3 "LIM/homeobox protein Lhx3" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 KO:K09374 HOVERGEN:HBG006263
CTD:8022 EMBL:Z22702 EMBL:Z11589 PIR:S38821 RefSeq:NP_001081623.1
UniGene:Xl.32 ProteinModelPortal:P36200 SMR:P36200 GeneID:397959
KEGG:xla:397959 Xenbase:XB-GENE-865930 Uniprot:P36200
Length = 395
Score = 282 (104.3 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 62/146 (42%), Positives = 85/146 (58%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A++ VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDEFYLMEDSRLVCK 139
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y +S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY--------------ETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 211
Query: 122 GKMKSSQNRPKYGYY 136
+K R ++G Y
Sbjct: 212 --LKKDAGRQRWGQY 224
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 280 (103.6 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 62/146 (42%), Positives = 84/146 (57%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y ++ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDY-------------ETAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L+ ++ P E+++ TGL RV QVWFQN RA++K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 214
Query: 122 GKMKSSQNRPKYG-YYPEPNKS 142
+K R ++G +Y +S
Sbjct: 215 --LKKDAGRHRWGQFYKSVKRS 234
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 280 (103.6 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 62/146 (42%), Positives = 84/146 (57%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y ++ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDY-------------ETAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L+ ++ P E+++ TGL RV QVWFQN RA++K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 214
Query: 122 GKMKSSQNRPKYG-YYPEPNKS 142
+K R ++G +Y +S
Sbjct: 215 --LKKDAGRHRWGQFYKSVKRS 234
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 280 (103.6 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 62/146 (42%), Positives = 84/146 (57%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 82 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 141
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y ++ AKR RTT T +QL+ L+ ++ P E
Sbjct: 142 EDY-------------ETAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVRE 188
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 189 QLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L+ ++ P E+++ TGL RV QVWFQN RA++K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 214
Query: 122 GKMKSSQNRPKYG-YYPEPNKS 142
+K R ++G +Y +S
Sbjct: 215 --LKKDAGRHRWGQFYKSVKRS 234
>UNIPROTKB|Q90881 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IEP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021522 eggNOG:NOG240987 KO:K09373 HOGENOM:HOG000034022
HOVERGEN:HBG006262 EMBL:L35566 IPI:IPI00682838 PIR:JC5658
RefSeq:NP_990757.1 UniGene:Gga.2348 HSSP:P61969 STRING:Q90881
GeneID:396397 KEGG:gga:396397 CTD:56956 InParanoid:Q90881
NextBio:20816439 Uniprot:Q90881
Length = 397
Score = 169 (64.5 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 30/61 (49%), Positives = 48/61 (78%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+ T+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 266 KTKRMATSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 325
Query: 758 L 758
L
Sbjct: 326 L 326
Score = 165 (63.1 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 26/67 (38%), Positives = 46/67 (68%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 184
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 185 AHFESLL 191
Score = 159 (61.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 28/58 (48%), Positives = 46/58 (79%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL 119
R+ T+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 269 RMATSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 326
Score = 64 (27.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 69 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
Score = 46 (21.3 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 68 PALCAGCGGKIS 79
>UNIPROTKB|E1BM14 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355 EMBL:DAAA02032103
IPI:IPI00694370 RefSeq:NP_001178104.1 UniGene:Bt.107855
PRIDE:E1BM14 Ensembl:ENSBTAT00000014582 GeneID:783763
KEGG:bta:783763 NextBio:20926288 Uniprot:E1BM14
Length = 406
Score = 179 (68.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 35/74 (47%), Positives = 56/74 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 265 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 324
Query: 758 L----HTGKMKSSQ 767
L +TG KS++
Sbjct: 325 LLRQENTGVDKSTE 338
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 33/71 (46%), Positives = 54/71 (76%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 268 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 327
Query: 120 --HTGKMKSSQ 128
+TG KS++
Sbjct: 328 QENTGVDKSTE 338
Score = 160 (61.4 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 107 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 166
Query: 671 SHYLELV 677
H+ L+
Sbjct: 167 LHFEALL 173
Score = 62 (26.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 51 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
Score = 40 (19.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 53 CAGCGGKIS 61
>UNIPROTKB|E2RPC3 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355 OMA:CNENDAE
EMBL:AAEX03006892 RefSeq:XP_863668.2 Ensembl:ENSCAFT00000032214
GeneID:491340 KEGG:cfa:491340 Uniprot:E2RPC3
Length = 406
Score = 179 (68.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 35/74 (47%), Positives = 56/74 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 265 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 324
Query: 758 L----HTGKMKSSQ 767
L +TG KS++
Sbjct: 325 LLRQENTGVDKSTE 338
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 33/71 (46%), Positives = 54/71 (76%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 268 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 327
Query: 120 --HTGKMKSSQ 128
+TG KS++
Sbjct: 328 QENTGVDKSTE 338
Score = 160 (61.4 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 107 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 166
Query: 671 SHYLELV 677
H+ L+
Sbjct: 167 LHFEALL 173
Score = 62 (26.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 51 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
Score = 40 (19.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 53 CAGCGGKIS 61
>UNIPROTKB|C4TJC6 [details] [associations]
symbol:Lhx2 "LIM homeobox protein 2" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 CTD:9355 OrthoDB:EOG4G4GQK OMA:CNENDAE EMBL:CU570921
EMBL:AB473486 RefSeq:NP_001163990.1 UniGene:Ssc.71156 STRING:C4TJC6
Ensembl:ENSSSCT00000006141 GeneID:100156063 KEGG:ssc:100156063
Uniprot:C4TJC6
Length = 406
Score = 179 (68.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 35/74 (47%), Positives = 56/74 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 265 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 324
Query: 758 L----HTGKMKSSQ 767
L +TG KS++
Sbjct: 325 LLRQENTGVDKSTE 338
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 33/71 (46%), Positives = 54/71 (76%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 268 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 327
Query: 120 --HTGKMKSSQ 128
+TG KS++
Sbjct: 328 QENTGVDKSTE 338
Score = 160 (61.4 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 107 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 166
Query: 671 SHYLELV 677
H+ L+
Sbjct: 167 LHFEALL 173
Score = 62 (26.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 51 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
Score = 40 (19.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 53 CAGCGGKIS 61
>WB|WBGene00000438 [details] [associations]
symbol:ceh-14 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0040040 "thermosensory behavior" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] Pfam:PF00412 InterPro:IPR001841
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00184
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0040040 EMBL:FO081392
GO:GO:0016048 EMBL:AF244368 PIR:S05710 RefSeq:NP_509273.1
UniGene:Cel.18140 ProteinModelPortal:P20271 SMR:P20271
IntAct:P20271 STRING:P20271 PaxDb:P20271 EnsemblMetazoa:F46C8.5
GeneID:181012 KEGG:cel:CELE_F46C8.5 UCSC:F46C8.5 CTD:181012
WormBase:F46C8.5 eggNOG:NOG275246 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 InParanoid:P20271 KO:K09374 OMA:PIESING
NextBio:911980 Uniprot:P20271
Length = 351
Score = 270 (100.1 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 63/160 (39%), Positives = 81/160 (50%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
++ FG KCS C GI VRKA +HVYH+ CF C CKR L TGEEF L D R++C
Sbjct: 100 YKKFGTKCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADDARLVC 159
Query: 670 KSHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K Y + KR RTT + + L+ L+ +Q S P
Sbjct: 160 KDDYEQ---------ARDKHCNELEGDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVR 210
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK-HLHTGKMKSSQN 768
E++A TGL RV QVWFQN RA++K+ G+ S N
Sbjct: 211 EQLASETGLDMRVVQVWFQNRRAKEKRLKKDAGRRWKSSN 250
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLH 120
R RTT + + L+ L+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 182 RPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKEKRLKKD 241
Query: 121 TGKMKSSQNR 130
G+ S NR
Sbjct: 242 AGRRWKSSNR 251
>UNIPROTKB|P20271 [details] [associations]
symbol:ceh-14 "Homeobox protein ceh-14" species:6239
"Caenorhabditis elegans" [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016048 "detection of
temperature stimulus" evidence=IMP] Pfam:PF00412 InterPro:IPR001841
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00184
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0040040 EMBL:FO081392
GO:GO:0016048 EMBL:AF244368 PIR:S05710 RefSeq:NP_509273.1
UniGene:Cel.18140 ProteinModelPortal:P20271 SMR:P20271
IntAct:P20271 STRING:P20271 PaxDb:P20271 EnsemblMetazoa:F46C8.5
GeneID:181012 KEGG:cel:CELE_F46C8.5 UCSC:F46C8.5 CTD:181012
WormBase:F46C8.5 eggNOG:NOG275246 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 InParanoid:P20271 KO:K09374 OMA:PIESING
NextBio:911980 Uniprot:P20271
Length = 351
Score = 270 (100.1 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 63/160 (39%), Positives = 81/160 (50%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED--RVLC 669
++ FG KCS C GI VRKA +HVYH+ CF C CKR L TGEEF L D R++C
Sbjct: 100 YKKFGTKCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIADDARLVC 159
Query: 670 KSHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDL 729
K Y + KR RTT + + L+ L+ +Q S P
Sbjct: 160 KDDYEQ---------ARDKHCNELEGDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVR 210
Query: 730 ERIAQITGLSKRVTQVWFQNSRARQKK-HLHTGKMKSSQN 768
E++A TGL RV QVWFQN RA++K+ G+ S N
Sbjct: 211 EQLASETGLDMRVVQVWFQNRRAKEKRLKKDAGRRWKSSN 250
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLH 120
R RTT + + L+ L+ +Q S P E++A TGL RV QVWFQN RA++K+
Sbjct: 182 RPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKEKRLKKD 241
Query: 121 TGKMKSSQNR 130
G+ S NR
Sbjct: 242 AGRRWKSSNR 251
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 280 (103.6 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 62/146 (42%), Positives = 84/146 (57%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VRKA+D VYHL CFAC C RQL+TG+EF L ED R++CK
Sbjct: 87 FKRFGTKCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCK 146
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
Y ++ AKR RTT T +QL+ L+ ++ P E
Sbjct: 147 EDY-------------ETAKQNDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 194 QLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L+ ++ P E+++ TGL RV QVWFQN RA++K+
Sbjct: 164 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 219
Query: 122 GKMKSSQNRPKYG-YYPEPNKS 142
+K R ++G +Y +S
Sbjct: 220 --LKKDAGRHRWGQFYKSVKRS 239
>UNIPROTKB|G3N0G6 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
GeneTree:ENSGT00680000099670 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 OMA:CNENDAE EMBL:DAAA02032103
Ensembl:ENSBTAT00000065104 Uniprot:G3N0G6
Length = 427
Score = 179 (68.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 35/74 (47%), Positives = 56/74 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 265 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 324
Query: 758 L----HTGKMKSSQ 767
L +TG KS++
Sbjct: 325 LLRQENTGVDKSTE 338
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 33/71 (46%), Positives = 54/71 (76%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 268 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 327
Query: 120 --HTGKMKSSQ 128
+TG KS++
Sbjct: 328 QENTGVDKSTE 338
Score = 160 (61.4 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 107 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 166
Query: 671 SHYLELV 677
H+ L+
Sbjct: 167 LHFEALL 173
Score = 62 (26.9 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 51 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
Score = 40 (19.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 53 CAGCGGKIS 61
>ZFIN|ZDB-GENE-051220-1 [details] [associations]
symbol:lhx2b "LIM homeobox 2b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0043010
"camera-type eye development" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IMP] [GO:0031290 "retinal ganglion cell axon
guidance" evidence=IMP] [GO:0021537 "telencephalon development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0021554 "optic nerve development" evidence=IMP] [GO:0009416
"response to light stimulus" evidence=IMP] [GO:0071632 "optomotor
response" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-051220-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0010468
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0021537 GO:GO:0031290
GO:GO:0007634 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:CNENDAE
EMBL:AL929566 EMBL:BX005074 IPI:IPI00505332 RefSeq:NP_001035099.3
UniGene:Dr.16318 SMR:B0R107 Ensembl:ENSDART00000148020
GeneID:791744 KEGG:dre:791744 CTD:791744 NextBio:20930769
Uniprot:B0R107
Length = 427
Score = 177 (67.4 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 285 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 344
Query: 758 L----HTGKMKSS 766
L +TG K+S
Sbjct: 345 LLRQENTGVDKAS 357
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 35/80 (43%), Positives = 55/80 (68%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 288 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 347
Query: 120 --HTGKMKSSQNRPKYGYYP 137
+TG K+S G P
Sbjct: 348 QENTGVDKASDGSNLAGGTP 367
Score = 162 (62.1 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 138 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 197
Query: 671 SHYLELV 677
H+ L+
Sbjct: 198 LHFETLI 204
Score = 63 (27.2 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 616 GAKCSKC--CRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
G + + C C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 78 GDRVALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 137
Score = 40 (19.1 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 84 CAGCGGKIS 92
>ZFIN|ZDB-GENE-980526-131 [details] [associations]
symbol:lhx3 "LIM homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-980526-131 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG275246 KO:K09374 HOVERGEN:HBG006263 CTD:8022 EMBL:U34590
IPI:IPI00486105 RefSeq:NP_571283.1 UniGene:Dr.570
ProteinModelPortal:Q90421 SMR:Q90421 STRING:Q90421 GeneID:30455
KEGG:dre:30455 NextBio:20806850 Uniprot:Q90421
Length = 398
Score = 280 (103.6 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 62/146 (42%), Positives = 84/146 (57%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C +GI + VR+A+D VYHL CFAC CKRQL+TG+E+ L ED R++CK
Sbjct: 80 FKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLMEDSRLVCK 139
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y S AKR RTT T +QL+ L+ + P E
Sbjct: 140 ADY--------------ETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVRE 185
Query: 731 RIAQITGLSKRVTQVWFQNSRARQKK 756
+++ TGL RV QVWFQN RA++K+
Sbjct: 186 QLSTETGLDMRVVQVWFQNRRAKEKR 211
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTT T +QL+ L+ + P E+++ TGL RV QVWFQN RA++K+
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQVWFQNRRAKEKR---- 211
Query: 122 GKMKSSQNRPKYGYY 136
+K R ++G Y
Sbjct: 212 --LKKDAGRQRWGQY 224
>UNIPROTKB|P50458 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0021978 "telencephalon
regionalization" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
KO:K09373 GO:GO:0021978 GO:GO:0000988 eggNOG:COG5576 GO:GO:2000678
EMBL:U11701 EMBL:BC093662 EMBL:BC112185 EMBL:AK094511 EMBL:AF124735
IPI:IPI00032144 RefSeq:NP_004780.3 UniGene:Hs.696425
ProteinModelPortal:P50458 SMR:P50458 STRING:P50458
PhosphoSite:P50458 DMDM:8247936 PaxDb:P50458 PRIDE:P50458
DNASU:9355 Ensembl:ENST00000373615 GeneID:9355 KEGG:hsa:9355
UCSC:uc004boe.1 CTD:9355 GeneCards:GC09P126763 HGNC:HGNC:6594
MIM:603759 neXtProt:NX_P50458 PharmGKB:PA30365 HOGENOM:HOG000034022
HOVERGEN:HBG006262 InParanoid:P50458 OrthoDB:EOG4G4GQK
PhylomeDB:P50458 ChiTaRS:LHX2 GenomeRNAi:9355 NextBio:35033
Bgee:P50458 CleanEx:HS_LHX2 Genevestigator:P50458
GermOnline:ENSG00000106689 Uniprot:P50458
Length = 406
Score = 177 (67.4 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 265 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 324
Query: 758 L----HTGKMKSS 766
L +TG KS+
Sbjct: 325 LLRQENTGVDKST 337
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 268 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 327
Query: 120 --HTGKMKSS 127
+TG KS+
Sbjct: 328 QENTGVDKST 337
Score = 160 (61.4 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 107 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 166
Query: 671 SHYLELV 677
H+ L+
Sbjct: 167 LHFEALL 173
Score = 62 (26.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 51 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
Score = 40 (19.1 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 53 CAGCGGKIS 61
>MGI|MGI:96785 [details] [associations]
symbol:Lhx2 "LIM homeobox protein 2" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001843
"neural tube closure" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0007498 "mesoderm development" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0021537 "telencephalon development"
evidence=IMP] [GO:0021978 "telencephalon regionalization"
evidence=IGI;IMP] [GO:0022008 "neurogenesis" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048646 "anatomical structure formation
involved in morphogenesis" evidence=IMP] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:96785 GO:GO:0005634 GO:GO:0007411
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0021978 GO:GO:0000988 GO:GO:2000678 CTD:9355
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OrthoDB:EOG4G4GQK
EMBL:AF124734 EMBL:BC055741 IPI:IPI00129385 RefSeq:NP_034840.1
UniGene:Mm.142856 ProteinModelPortal:Q9Z0S2 SMR:Q9Z0S2
STRING:Q9Z0S2 PhosphoSite:Q9Z0S2 PRIDE:Q9Z0S2
Ensembl:ENSMUST00000000253 GeneID:16870 KEGG:mmu:16870
InParanoid:Q9Z0S2 OMA:CNENDAE NextBio:290834 Bgee:Q9Z0S2
CleanEx:MM_LHX2 Genevestigator:Q9Z0S2 GermOnline:ENSMUSG00000000247
Uniprot:Q9Z0S2
Length = 406
Score = 177 (67.4 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 265 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 324
Query: 758 L----HTGKMKSS 766
L +TG K+S
Sbjct: 325 LLRQENTGVDKTS 337
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 268 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 327
Query: 120 --HTGKMKSS 127
+TG K+S
Sbjct: 328 QENTGVDKTS 337
Score = 160 (61.4 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 107 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 166
Query: 671 SHYLELV 677
H+ L+
Sbjct: 167 LHFEALL 173
Score = 62 (26.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 51 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
Score = 40 (19.1 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 53 CAGCGGKIS 61
>UNIPROTKB|D4A380 [details] [associations]
symbol:Lhx2 "LIM/homeobox protein Lhx2" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71076 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355
OrthoDB:EOG4G4GQK UniGene:Rn.81063 EMBL:CH473983 IPI:IPI00950401
RefSeq:NP_001100041.1 SMR:D4A380 Ensembl:ENSRNOT00000064507
GeneID:296706 KEGG:rno:296706 NextBio:641689 Uniprot:D4A380
Length = 406
Score = 177 (67.4 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 265 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 324
Query: 758 L----HTGKMKSS 766
L +TG K+S
Sbjct: 325 LLRQENTGVDKTS 337
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 268 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 327
Query: 120 --HTGKMKSS 127
+TG K+S
Sbjct: 328 QENTGVDKTS 337
Score = 160 (61.4 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 107 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 166
Query: 671 SHYLELV 677
H+ L+
Sbjct: 167 LHFEALL 173
Score = 62 (26.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 51 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 106
Score = 40 (19.1 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 53 CAGCGGKIS 61
>UNIPROTKB|H7C0H1 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
EMBL:AC006450 HGNC:HGNC:6594 ChiTaRS:LHX2 OMA:CNENDAE EMBL:AL158052
ProteinModelPortal:H7C0H1 Ensembl:ENST00000446480 Uniprot:H7C0H1
Length = 412
Score = 177 (67.4 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 271 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 330
Query: 758 L----HTGKMKSS 766
L +TG KS+
Sbjct: 331 LLRQENTGVDKST 343
Score = 167 (63.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 274 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 333
Query: 120 --HTGKMKSS 127
+TG KS+
Sbjct: 334 QENTGVDKST 343
Score = 160 (61.4 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 113 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 172
Query: 671 SHYLELV 677
H+ L+
Sbjct: 173 LHFEALL 179
Score = 62 (26.9 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 49 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 104
Score = 40 (19.1 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 51 CAGCGGKIS 59
>RGD|71076 [details] [associations]
symbol:Lhx2 "LIM homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=ISO] [GO:0001843
"neural tube closure" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0007498 "mesoderm development" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA;ISO] [GO:0021537 "telencephalon development"
evidence=ISO] [GO:0021978 "telencephalon regionalization"
evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030182 "neuron differentiation" evidence=IEP;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISO] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IEA;ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:71076 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893 GO:GO:0030182
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
eggNOG:NOG240987 GO:GO:0021978 GO:GO:0000988 GO:GO:2000678
HOGENOM:HOG000034022 HOVERGEN:HBG006262 EMBL:L06804 IPI:IPI00199572
PIR:A47179 UniGene:Rn.81063 ProteinModelPortal:P36198 SMR:P36198
STRING:P36198 UCSC:RGD:71076 InParanoid:P36198 ArrayExpress:P36198
Genevestigator:P36198 GermOnline:ENSRNOG00000010551 Uniprot:P36198
Length = 426
Score = 177 (67.4 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 263 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 322
Query: 758 L----HTGKMKSS 766
L +TG K+S
Sbjct: 323 LLRQENTGVDKTS 335
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 266 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 325
Query: 120 --HTGKMKSS 127
+TG K+S
Sbjct: 326 QENTGVDKTS 335
Score = 159 (61.0 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI+ S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISESEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 165
Query: 671 SHYLELV 677
H+ L+
Sbjct: 166 LHFEALL 172
Score = 62 (26.9 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 50 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 105
Score = 40 (19.1 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 52 CAGCGGKIS 60
>UNIPROTKB|P36198 [details] [associations]
symbol:Lhx2 "LIM/homeobox protein Lhx2" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71076 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893
GO:GO:0030182 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843
GO:GO:0009953 eggNOG:NOG240987 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 HOGENOM:HOG000034022 HOVERGEN:HBG006262 EMBL:L06804
IPI:IPI00199572 PIR:A47179 UniGene:Rn.81063
ProteinModelPortal:P36198 SMR:P36198 STRING:P36198 UCSC:RGD:71076
InParanoid:P36198 ArrayExpress:P36198 Genevestigator:P36198
GermOnline:ENSRNOG00000010551 Uniprot:P36198
Length = 426
Score = 177 (67.4 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 35/73 (47%), Positives = 55/73 (75%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 263 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 322
Query: 758 L----HTGKMKSS 766
L +TG K+S
Sbjct: 323 LLRQENTGVDKTS 335
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV QVWFQN+RA+ +++L
Sbjct: 266 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLR 325
Query: 120 --HTGKMKSS 127
+TG K+S
Sbjct: 326 QENTGVDKTS 335
Score = 159 (61.0 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI+ S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 106 YRRFSVQRCARCHLGISESEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 165
Query: 671 SHYLELV 677
H+ L+
Sbjct: 166 LHFEALL 172
Score = 62 (26.9 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 16/57 (28%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +H+ C C CK L + + + CK Y
Sbjct: 50 ALCAGC-GGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY 105
Score = 40 (19.1 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 52 CAGCGGKIS 60
>UNIPROTKB|D6RAK3 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HGNC:HGNC:6132 EMBL:AC010478 IPI:IPI00966565
Ensembl:ENST00000505475 Bgee:D6RAK3 Uniprot:D6RAK3
Length = 260
Score = 176 (67.0 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++ +
Sbjct: 11 YGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADH 69
Score = 134 (52.2 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 116 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 174
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 119 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 174
>UNIPROTKB|P53410 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOVERGEN:HBG004671 EMBL:L35568
IPI:IPI00574086 PIR:I50370 UniGene:Gga.790
ProteinModelPortal:P53410 SMR:P53410 Uniprot:P53410
Length = 319
Score = 181 (68.8 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C +SSD V +ARDHVYHL CF C AC RQL G++F L E +LC++
Sbjct: 46 RLFGIKCAQCRAAFSSSDLVMRARDHVYHLECFRCAACGRQLLPGDQFCLRERDLLCRAD 105
Query: 673 Y 673
+
Sbjct: 106 H 106
Score = 134 (52.2 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 149 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 207
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 152 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 207
Score = 58 (25.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 632 VRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+R + D +H+AC C C + L L + + CK Y
Sbjct: 3 LRVSPDLEWHVACLKCAECGQPLDETCTCFLRDGKAYCKRDY 44
>UNIPROTKB|E1BM60 [details] [associations]
symbol:ISL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IEA] [GO:0021524
"visceral motor neuron differentiation" evidence=IEA] [GO:0021520
"spinal cord motor neuron cell fate specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
GO:GO:0031290 GO:GO:0021520 GO:GO:0021524 OMA:RHDSAVQ
EMBL:DAAA02052446 IPI:IPI00701951 UniGene:Bt.34422
Ensembl:ENSBTAT00000022147 NextBio:20928153 Uniprot:E1BM60
Length = 359
Score = 184 (69.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y 673
+
Sbjct: 143 H 143
Score = 134 (52.2 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR-QKKHLH 120
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + +KK +
Sbjct: 193 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSIL 252
Query: 121 TGKMKSSQNRPK 132
+++ Q+ K
Sbjct: 253 MKQLQQQQHNDK 264
Score = 67 (28.6 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 25 AMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRL 84
Score = 42 (19.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 273 GLGINDPVETAQHA-FAVTSEKCKVLVDSLLKQEQLNLQEH 312
G +D V A+ + + + +C V LL ++ +L+EH
Sbjct: 95 GFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREH 135
>UNIPROTKB|Q96A47 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IEA] [GO:0021524 "visceral motor
neuron differentiation" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=TAS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
[GO:0048666 "neuron development" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:CH471136 GO:GO:0031290
GO:GO:0048935 eggNOG:COG5576 GO:GO:0021520 HOVERGEN:HBG004671
KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR GO:GO:0021524
OMA:RHDSAVQ EMBL:AK001022 EMBL:BC011967 EMBL:BC012136
IPI:IPI00059240 RefSeq:NP_665804.1 UniGene:Hs.444677
ProteinModelPortal:Q96A47 SMR:Q96A47 STRING:Q96A47
PhosphoSite:Q96A47 DMDM:20978495 PRIDE:Q96A47 DNASU:64843
Ensembl:ENST00000290759 GeneID:64843 KEGG:hsa:64843 UCSC:uc002bbw.1
CTD:64843 GeneCards:GC15P076629 HGNC:HGNC:18524 MIM:609481
neXtProt:NX_Q96A47 PharmGKB:PA38566 InParanoid:Q96A47
PhylomeDB:Q96A47 GenomeRNAi:64843 NextBio:66950 Bgee:Q96A47
CleanEx:HS_ISL2 Genevestigator:Q96A47 GermOnline:ENSG00000159556
Uniprot:Q96A47
Length = 359
Score = 184 (69.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y 673
+
Sbjct: 143 H 143
Score = 134 (52.2 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 193 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 67 (28.6 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 25 AMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRL 84
Score = 42 (19.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 273 GLGINDPVETAQHA-FAVTSEKCKVLVDSLLKQEQLNLQEH 312
G +D V A+ + + + +C V LL ++ +L+EH
Sbjct: 95 GFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREH 135
>UNIPROTKB|F1RKD0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
GO:GO:0021937 OMA:SHQGQEM EMBL:CU468670 Ensembl:ENSSSCT00000010817
Uniprot:F1RKD0
Length = 401
Score = 196 (74.1 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 DDYL 119
Score = 123 (48.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 177 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 236
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 183 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 238
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 239 QLSALGARRHAFFRSPRR 256
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C C LS E+ E ++ CK+ +
Sbjct: 5 CAGCERPILDR-FLLNVLDRAWHIKCVQCCECTN-LS--EKCFSREGKLYCKNDF 55
>UNIPROTKB|A6QQY6 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 CTD:64211 OMA:SHQGQEM
EMBL:DAAA02045421 EMBL:BC150043 IPI:IPI00867450
RefSeq:NP_001095531.1 UniGene:Bt.88188 Ensembl:ENSBTAT00000004042
GeneID:520759 KEGG:bta:520759 InParanoid:A6QQY6 NextBio:20873176
Uniprot:A6QQY6
Length = 402
Score = 196 (74.1 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL 674
YL
Sbjct: 117 DDYL 120
Score = 123 (48.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 68 (29.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK LS E+ E ++ CK+ +
Sbjct: 5 CAGCERPILDR-FLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDF 56
>UNIPROTKB|E2RRP3 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177 KO:K09372
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AAEX03014690
RefSeq:XP_543409.3 ProteinModelPortal:E2RRP3
Ensembl:ENSCAFT00000014514 GeneID:486283 KEGG:cfa:486283
NextBio:20860085 Uniprot:E2RRP3
Length = 402
Score = 196 (74.1 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL 674
YL
Sbjct: 117 DDYL 120
Score = 123 (48.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 68 (29.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK LS E+ E ++ CK+ +
Sbjct: 5 CAGCERPILDR-FLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDF 56
>UNIPROTKB|Q9H2C1 [details] [associations]
symbol:LHX5 "LIM/homeobox protein Lhx5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846
GO:GO:0021879 GO:GO:0021527 GO:GO:0021702 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AF291181 EMBL:BC109230
IPI:IPI00022760 RefSeq:NP_071758.1 UniGene:Hs.302029
ProteinModelPortal:Q9H2C1 SMR:Q9H2C1 STRING:Q9H2C1
PhosphoSite:Q9H2C1 DMDM:18202938 PRIDE:Q9H2C1
Ensembl:ENST00000261731 GeneID:64211 KEGG:hsa:64211 UCSC:uc001tvj.1
GeneCards:GC12M113900 HGNC:HGNC:14216 MIM:605992 neXtProt:NX_Q9H2C1
PharmGKB:PA30367 InParanoid:Q9H2C1 PhylomeDB:Q9H2C1
GenomeRNAi:64211 NextBio:66119 Bgee:Q9H2C1 CleanEx:HS_LHX5
Genevestigator:Q9H2C1 GermOnline:ENSG00000089116 Uniprot:Q9H2C1
Length = 402
Score = 196 (74.1 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL 674
YL
Sbjct: 117 DDYL 120
Score = 123 (48.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 68 (29.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK LS E+ E ++ CK+ +
Sbjct: 5 CAGCERPILDR-FLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDF 56
>MGI|MGI:107792 [details] [associations]
symbol:Lhx5 "LIM homeobox protein 5" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007267 "cell-cell signaling" evidence=IGI] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IGI] [GO:0021549 "cerebellum
development" evidence=IGI] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IGI] [GO:0021766 "hippocampus
development" evidence=IMP] [GO:0021846 "cell proliferation in
forebrain" evidence=IMP] [GO:0021879 "forebrain neuron
differentiation" evidence=IMP] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IGI]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:107792 GO:GO:0005634 GO:GO:0021766
GO:GO:0045893 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879 GO:GO:0021527
GO:GO:0021702 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:U61155 EMBL:BC057585 IPI:IPI00118119
RefSeq:NP_032525.1 UniGene:Mm.5151 ProteinModelPortal:P61375
SMR:P61375 STRING:P61375 PhosphoSite:P61375 PRIDE:P61375
Ensembl:ENSMUST00000031591 GeneID:16873 KEGG:mmu:16873
InParanoid:P61375 NextBio:290846 Bgee:P61375 CleanEx:MM_LHX5
Genevestigator:P61375 GermOnline:ENSMUSG00000029595 Uniprot:P61375
Length = 402
Score = 196 (74.1 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL 674
YL
Sbjct: 117 DDYL 120
Score = 123 (48.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 68 (29.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK LS E+ E ++ CK+ +
Sbjct: 5 CAGCERPILDR-FLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDF 56
>RGD|71079 [details] [associations]
symbol:Lhx5 "LIM homeobox 5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007267
"cell-cell signaling" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA;ISO] [GO:0021549 "cerebellum
development" evidence=ISO] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA;ISO] [GO:0021766 "hippocampus
development" evidence=IEA;ISO] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA;ISO] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA;ISO] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71079 GO:GO:0005634 GO:GO:0021766 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0021846 GO:GO:0021879 GO:GO:0021527 GO:GO:0021702
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:L35572 IPI:IPI00198471 PIR:I61573
RefSeq:NP_620605.1 UniGene:Rn.54653 ProteinModelPortal:P61376
SMR:P61376 STRING:P61376 Ensembl:ENSRNOT00000001883 GeneID:124451
KEGG:rno:124451 UCSC:RGD:71079 InParanoid:P61376 NextBio:620463
Genevestigator:P61376 GermOnline:ENSRNOG00000001392 Uniprot:P61376
Length = 402
Score = 196 (74.1 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL 674
YL
Sbjct: 117 DDYL 120
Score = 123 (48.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 68 (29.0 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK LS E+ E ++ CK+ +
Sbjct: 5 CAGCERPILDR-FLLNVLDRAWHIKCVQCCECKTNLS--EKCFSREGKLYCKNDF 56
>ZFIN|ZDB-GENE-091118-109 [details] [associations]
symbol:lhx2a "LIM homeobox 2a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-091118-109 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:BX470252 IPI:IPI00994306 Ensembl:ENSDART00000134360
ArrayExpress:E9QBI8 Bgee:E9QBI8 Uniprot:E9QBI8
Length = 328
Score = 167 (63.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 31/60 (51%), Positives = 47/60 (78%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K+KR+RT+F QL+ +Q+ F + NPD +DL+ +AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 199 KSKRMRTSFKHHQLRSMQSFFTHNHNPDAKDLKELAQKTGLTKRVLQVWFQNARAKFRRN 258
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 29/57 (50%), Positives = 44/57 (77%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R+RT+F QL+ +Q+ F + NPD +DL+ +AQ TGL+KRV QVWFQN+RA+ +++
Sbjct: 202 RMRTSFKHHQLRSMQSFFTHNHNPDAKDLKELAQKTGLTKRVLQVWFQNARAKFRRN 258
Score = 150 (57.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 613 RSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R F + +C++C GI++++ V +ARD VYHL+CF+C C + L TG+ + + E V C++
Sbjct: 69 RRFSSQRCARCHLGISATEIVMRARDLVYHLSCFSCATCHKVLLTGDHYGMKETSVYCRA 128
Query: 672 H 672
H
Sbjct: 129 H 129
Score = 65 (27.9 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 616 GAKCSKC--CRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKSH 672
G+ C C + S + A + +H C C AC+ L + F+ H D + CK
Sbjct: 7 GSDAPVCAGCGALISDRFYLLAAERRWHERCLKCSACQTDLESELTCFSKHGD-IYCKED 65
Query: 673 Y 673
Y
Sbjct: 66 Y 66
>UNIPROTKB|E1BQX0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021879 "forebrain neuron differentiation" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177 GO:GO:0021937
OMA:SHQGQEM EMBL:AADN02050410 EMBL:AADN02050411 EMBL:AADN02050412
EMBL:AADN02050413 EMBL:AADN02050414 IPI:IPI00574747
Ensembl:ENSGALT00000013517 NextBio:20921461 Uniprot:E1BQX0
Length = 402
Score = 195 (73.7 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VRKAR+ V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCK 116
Query: 671 SHYL 674
YL
Sbjct: 117 EDYL 120
Score = 123 (48.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 66 (28.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK ++
Sbjct: 5 CAGCERPILDR-FLLNVLDRAWHIKCVQCCECKCNLT--EKCFFREGKLYCKKNF 56
>FB|FBgn0002023 [details] [associations]
symbol:Lim3 "Lim3" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HSSP:P50480 FlyBase:FBgn0002023
EMBL:BT003469 ProteinModelPortal:Q86P58 SMR:Q86P58 IntAct:Q86P58
STRING:Q86P58 PRIDE:Q86P58 InParanoid:Q86P58 ArrayExpress:Q86P58
Bgee:Q86P58 Uniprot:Q86P58
Length = 523
Score = 277 (102.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 63/157 (40%), Positives = 84/157 (53%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDR-VLCKS 671
R +G KCS C GI + VR+A+D+VYHL CF C C R L+TG+EF L EDR ++CK
Sbjct: 178 RRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKR 237
Query: 672 HYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
Y E KR RTT T +QL+ L+ + P E+
Sbjct: 238 DYEE------AKAKGLYLDGSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQ 291
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK-HLHTGKMKSSQ 767
++Q TGL RV QVWFQN RA++K+ G+ + SQ
Sbjct: 292 LSQDTGLDMRVVQVWFQNRRAKEKRLKKDAGRTRWSQ 328
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 36/102 (35%), Positives = 50/102 (49%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLH 120
R RTT T +QL+ L+ + P E+++Q TGL RV QVWFQN RA++K+
Sbjct: 261 RPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKRLKKD 320
Query: 121 TGKMKSSQN-RPKYGYYPEPNKSFLVIKPQFLEEASLLFHDL 161
G+ + SQ R G FL ++ S HDL
Sbjct: 321 AGRTRWSQYFRSMKGNCSPRTDKFLDKDELKVDYDSFSHHDL 362
Score = 39 (18.8 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 601 LLKGRLSVLICFRSFGAKCSKC--CRG 625
L+ R + + R++ AKC +C C G
Sbjct: 128 LILDRFILKVLERTWHAKCLQCSECHG 154
>UNIPROTKB|D6RBJ1 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HOGENOM:HOG000236304 HGNC:HGNC:6132
EMBL:AC010478 IPI:IPI00966899 ProteinModelPortal:D6RBJ1 SMR:D6RBJ1
Ensembl:ENST00000511384 ArrayExpress:D6RBJ1 Bgee:D6RBJ1
Uniprot:D6RBJ1
Length = 326
Score = 179 (68.1 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 73 RLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 132
Query: 673 Y 673
+
Sbjct: 133 H 133
Score = 134 (52.2 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 183 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 68 (29.0 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRL 74
>ZFIN|ZDB-GENE-980526-562 [details] [associations]
symbol:isl2a "islet2a" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IGI;IMP] [GO:0048665 "neuron fate specification"
evidence=IGI;IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-562 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0048665 GeneTree:ENSGT00700000104050
GO:GO:0048676 eggNOG:COG5576 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38453 EMBL:X88805
EMBL:U09403 IPI:IPI00483445 PIR:I51734 RefSeq:NP_571045.1
UniGene:Dr.281 ProteinModelPortal:P53406 SMR:P53406
Ensembl:ENSDART00000012862 GeneID:30157 KEGG:dre:30157 CTD:30157
InParanoid:P53406 OMA:RHDSAVQ NextBio:20806628 ArrayExpress:P53406
Bgee:P53406 Uniprot:P53406
Length = 359
Score = 180 (68.4 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G SSD V +ARD+VYH+ CF C C R L G+EF+L ++ +LC++
Sbjct: 83 RLFGIKCAKCNIGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRAD 142
Query: 673 Y 673
+
Sbjct: 143 H 143
Score = 135 (52.6 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR-QKKHLH 120
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + +KK +
Sbjct: 193 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSIL 252
Query: 121 TGKMKSSQNRPK 132
+++ Q+ K
Sbjct: 253 MKQLQQQQHNDK 264
Score = 67 (28.6 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 25 AMCVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRL 84
>MGI|MGI:109156 [details] [associations]
symbol:Isl2 "insulin related protein 2 (islet 2)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021524 "visceral motor neuron differentiation"
evidence=IGI;IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IGI;IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 MGI:MGI:109156
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 EMBL:CH466522 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 OMA:RHDSAVQ CTD:64843 EMBL:AK013964
EMBL:AC116699 IPI:IPI00110854 RefSeq:NP_081673.2 UniGene:Mm.273996
PDB:3MMK PDBsum:3MMK ProteinModelPortal:Q9CXV0 STRING:Q9CXV0
PhosphoSite:Q9CXV0 PRIDE:Q9CXV0 DNASU:104360
Ensembl:ENSMUST00000034869 GeneID:104360 KEGG:mmu:104360
UCSC:uc009psm.1 InParanoid:Q9CXV0 NextBio:356992 CleanEx:MM_ISL2
Genevestigator:Q9CXV0 GermOnline:ENSMUSG00000032318 Uniprot:Q9CXV0
Length = 359
Score = 180 (68.4 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y 673
+
Sbjct: 143 H 143
Score = 134 (52.2 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 193 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 67 (28.6 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 25 AMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRL 84
Score = 42 (19.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 273 GLGINDPVETAQHA-FAVTSEKCKVLVDSLLKQEQLNLQEH 312
G +D V A+ + + + +C V LL ++ +L+EH
Sbjct: 95 GFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREH 135
>RGD|621849 [details] [associations]
symbol:Isl2 "ISL LIM homeobox 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA;ISO] [GO:0048663
"neuron fate commitment" evidence=ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576 GO:GO:0021520
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR
GO:GO:0021524 CTD:64843 EMBL:L35571 IPI:IPI00198543 PIR:A55198
RefSeq:NP_065204.1 UniGene:Rn.10026 PDB:1BW5 PDBsum:1BW5
ProteinModelPortal:P50480 SMR:P50480 STRING:P50480 PRIDE:P50480
GeneID:57233 KEGG:rno:57233 UCSC:RGD:621849 InParanoid:P50480
EvolutionaryTrace:P50480 NextBio:611298 ArrayExpress:P50480
Genevestigator:P50480 GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 180 (68.4 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y 673
+
Sbjct: 143 H 143
Score = 134 (52.2 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 194 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
Score = 67 (28.6 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 25 AMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRL 84
Score = 42 (19.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 273 GLGINDPVETAQHA-FAVTSEKCKVLVDSLLKQEQLNLQEH 312
G +D V A+ + + + +C V LL ++ +L+EH
Sbjct: 95 GFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREH 135
>UNIPROTKB|P50480 [details] [associations]
symbol:Isl2 "Insulin gene enhancer protein ISL-2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 CTD:64843 EMBL:L35571
IPI:IPI00198543 PIR:A55198 RefSeq:NP_065204.1 UniGene:Rn.10026
PDB:1BW5 PDBsum:1BW5 ProteinModelPortal:P50480 SMR:P50480
STRING:P50480 PRIDE:P50480 GeneID:57233 KEGG:rno:57233
UCSC:RGD:621849 InParanoid:P50480 EvolutionaryTrace:P50480
NextBio:611298 ArrayExpress:P50480 Genevestigator:P50480
GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 180 (68.4 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC++C G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 83 RLFGIKCAQCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 142
Query: 673 Y 673
+
Sbjct: 143 H 143
Score = 134 (52.2 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 194 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 249
Score = 67 (28.6 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 25 AMCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRL 84
Score = 42 (19.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 273 GLGINDPVETAQHA-FAVTSEKCKVLVDSLLKQEQLNLQEH 312
G +D V A+ + + + +C V LL ++ +L+EH
Sbjct: 95 GFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREH 135
>UNIPROTKB|A6H796 [details] [associations]
symbol:ISL1 "ISL1 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148
GO:GO:0003215 GO:GO:0060384 GO:GO:0021520 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:DAAA02050419 EMBL:BC146163
IPI:IPI00854388 RefSeq:NP_001092600.1 UniGene:Bt.28168 SMR:A6H796
STRING:A6H796 Ensembl:ENSBTAT00000001638 GeneID:614040
KEGG:bta:614040 InParanoid:A6H796 NextBio:20898906 Uniprot:A6H796
Length = 349
Score = 179 (68.1 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 73 RLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 132
Query: 673 Y 673
+
Sbjct: 133 H 133
Score = 134 (52.2 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 183 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 68 (29.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRL 74
>UNIPROTKB|P61371 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0003266 "regulation of secondary heart
field cardioblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0031103 "axon regeneration"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=ISS] [GO:0010575 "positive
regulation vascular endothelial growth factor production"
evidence=ISS] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=ISS] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=ISS] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISS] [GO:0045766
"positive regulation of angiogenesis" evidence=ISS] [GO:0071657
"positive regulation of granulocyte colony-stimulating factor
production" evidence=ISS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0021522
"spinal cord motor neuron differentiation" evidence=ISS]
[GO:0048762 "mesenchymal cell differentiation" evidence=ISS]
[GO:0031016 "pancreas development" evidence=ISS] [GO:1901258
"positive regulation of macrophage colony-stimulating factor
production" evidence=ISS] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=ISS] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=ISS] [GO:0048665 "neuron fate
specification" evidence=ISS] [GO:0021559 "trigeminal nerve
development" evidence=ISS] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=ISS] [GO:0048880 "sensory system
development" evidence=ISS] [GO:0060384 "innervation" evidence=ISS]
[GO:0060413 "atrial septum morphogenesis" evidence=ISS] [GO:0060037
"pharyngeal system development" evidence=ISS] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=ISS]
[GO:0003215 "cardiac right ventricle morphogenesis" evidence=ISS]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0003148
"outflow tract septum morphogenesis" evidence=ISS] [GO:0003139
"secondary heart field specification" evidence=IMP] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] [GO:0060913 "cardiac cell fate
determination" evidence=IDA] [GO:0071385 "cellular response to
glucocorticoid stimulus" evidence=ISS] [GO:0032024 "positive
regulation of insulin secretion" evidence=IC] [GO:0090074 "negative
regulation of protein homodimerization activity" evidence=ISS]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=ISS] [GO:0030331 "estrogen receptor
binding" evidence=ISS] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0050728 GO:GO:0008270 GO:GO:0071385 GO:GO:0045665
GO:GO:0043524 GO:GO:0032755 GO:GO:0010575 GO:GO:0032024
GO:GO:0003700 GO:GO:0045766 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0060037 GO:GO:0090090 GO:GO:0032731 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0030331 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0048665 GO:GO:0032729
GO:GO:0032760 GO:GO:0016922 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0048762 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0032730 GO:GO:0032735 GO:GO:0071657
GO:GO:0060413 GO:GO:0033147 GO:GO:0003266 eggNOG:COG5576
GO:GO:0003148 GO:GO:0003215 GO:GO:0060384 GO:GO:0021520
GO:GO:0032725 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
EMBL:S70721 EMBL:U07559 EMBL:BC031213 IPI:IPI00025071 PIR:I53277
RefSeq:NP_002193.2 UniGene:Hs.505 ProteinModelPortal:P61371
SMR:P61371 IntAct:P61371 STRING:P61371 PhosphoSite:P61371
DMDM:47606423 PRIDE:P61371 DNASU:3670 Ensembl:ENST00000230658
GeneID:3670 KEGG:hsa:3670 UCSC:uc003jor.3 GeneCards:GC05P050714
HGNC:HGNC:6132 MIM:600366 neXtProt:NX_P61371 PharmGKB:PA29932
InParanoid:P61371 PhylomeDB:P61371 GenomeRNAi:3670 NextBio:14363
ArrayExpress:P61371 Bgee:P61371 CleanEx:HS_ISL1
Genevestigator:P61371 GermOnline:ENSG00000016082 GO:GO:0060913
GO:GO:0060379 GO:GO:0090074 GO:GO:0048880 GO:GO:0021524
Uniprot:P61371
Length = 349
Score = 179 (68.1 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 73 RLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 132
Query: 673 Y 673
+
Sbjct: 133 H 133
Score = 134 (52.2 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 183 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 68 (29.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRL 74
>MGI|MGI:101791 [details] [associations]
symbol:Isl1 "ISL1 transcription factor, LIM/homeodomain"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO;IDA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISO] [GO:0001755 "neural
crest cell migration" evidence=IGI] [GO:0003007 "heart
morphogenesis" evidence=IGI] [GO:0003139 "secondary heart field
specification" evidence=ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IGI] [GO:0003151 "outflow tract
morphogenesis" evidence=IGI] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IGI] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=IGI] [GO:0003266 "regulation of secondary
heart field cardioblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007507
"heart development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IDA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISO]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IMP] [GO:0021524 "visceral motor neuron
differentiation" evidence=IGI] [GO:0021559 "trigeminal nerve
development" evidence=IMP] [GO:0021983 "pituitary gland
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IGI;IMP] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISO] [GO:0032725 "positive regulation of granulocyte
macrophage colony-stimulating factor production" evidence=IDA]
[GO:0032729 "positive regulation of interferon-gamma production"
evidence=IDA] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=IDA] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=IDA] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IDA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IDA] [GO:0033147 "negative regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0042517 "positive regulation of tyrosine phosphorylation of
Stat3 protein" evidence=IDA] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043425 "bHLH transcription factor
binding" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI] [GO:0045766 "positive regulation of
angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IGI]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0048762
"mesenchymal cell differentiation" evidence=IMP] [GO:0048880
"sensory system development" evidence=IMP] [GO:0048936 "peripheral
nervous system neuron axonogenesis" evidence=IMP] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IGI] [GO:0060037 "pharyngeal system development"
evidence=IGI] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0060413 "atrial septum morphogenesis"
evidence=IGI] [GO:0060913 "cardiac cell fate determination"
evidence=ISO;IMP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IDA] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101791 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008284 GO:GO:0001755 GO:GO:0050728
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0032755
GO:GO:0010575 GO:GO:0032024 GO:GO:0003700 GO:GO:0045766
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0032731
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0032729 GO:GO:0032760
GeneTree:ENSGT00700000104050 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0032730 GO:GO:0032735 GO:GO:0071657 GO:GO:0060413
GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 GO:GO:0032725 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:AJ132765 EMBL:AB104633
IPI:IPI00121604 IPI:IPI00415262 RefSeq:NP_067434.3 UniGene:Mm.42242
PDB:2RGT PDBsum:2RGT ProteinModelPortal:P61372 SMR:P61372
MINT:MINT-4594016 STRING:P61372 PhosphoSite:P61372 PRIDE:P61372
Ensembl:ENSMUST00000036060 Ensembl:ENSMUST00000176044 GeneID:16392
KEGG:mmu:16392 UCSC:uc007ryf.2 InParanoid:P61372
EvolutionaryTrace:P61372 NextBio:289537 Bgee:P61372 CleanEx:MM_ISL1
Genevestigator:P61372 GermOnline:ENSMUSG00000042258 Uniprot:P61372
Length = 349
Score = 179 (68.1 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 73 RLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 132
Query: 673 Y 673
+
Sbjct: 133 H 133
Score = 134 (52.2 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 183 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 68 (29.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRL 74
>RGD|61957 [details] [associations]
symbol:Isl1 "ISL LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA;ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA;ISO] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001755 "neural
crest cell migration" evidence=IEA;ISO] [GO:0003007 "heart
morphogenesis" evidence=ISO] [GO:0003139 "secondary heart field
specification" evidence=IEA;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IEA;ISO] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA;ISO] [GO:0003266 "regulation
of secondary heart field cardioblast proliferation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007507 "heart development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=IEA;ISO] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IDA;IPI]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0021559 "trigeminal nerve
development" evidence=IEA;ISO] [GO:0021983 "pituitary gland
development" evidence=IEA;ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0031016 "pancreas development" evidence=IEA;ISO] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0032024 "positive regulation of
insulin secretion" evidence=IMP] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA;ISO] [GO:0032729 "positive regulation of
interferon-gamma production" evidence=IEA;ISO] [GO:0032730 "positive
regulation of interleukin-1 alpha production" evidence=IEA;ISO]
[GO:0032731 "positive regulation of interleukin-1 beta production"
evidence=IEA;ISO] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA;ISO] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA;ISO] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA;ISO]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=IDA] [GO:0042517 "positive regulation of
tyrosine phosphorylation of Stat3 protein" evidence=IEA;ISO]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA;ISO]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA;ISO]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045766 "positive regulation
of angiogenesis" evidence=IEA;ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048663 "neuron fate commitment" evidence=ISO] [GO:0048665
"neuron fate specification" evidence=ISO] [GO:0048762 "mesenchymal
cell differentiation" evidence=ISO] [GO:0048880 "sensory system
development" evidence=IEA;ISO] [GO:0048936 "peripheral nervous
system neuron axonogenesis" evidence=IEA;ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA;ISO] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0060037 "pharyngeal system development" evidence=IEA;ISO]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA;ISO] [GO:0060384 "innervation" evidence=IEA;ISO]
[GO:0060413 "atrial septum morphogenesis" evidence=IEA;ISO]
[GO:0060913 "cardiac cell fate determination" evidence=IEA;ISO]
[GO:0071385 "cellular response to glucocorticoid stimulus"
evidence=IEP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA;ISO] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:61957 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0001755 GO:GO:0043565 GO:GO:0008270 GO:GO:0071385
GO:GO:0045944 GO:GO:0045665 GO:GO:0043524 GO:GO:0032024
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0030331
GO:GO:0021559 GO:GO:0001158 GO:GO:0042517
GeneTree:ENSGT00700000104050 GO:GO:0016922 GO:GO:0031103
GO:GO:0055010 GO:GO:0003203 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0060413 GO:GO:0033147 GO:GO:0003266
eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215 GO:GO:0060384
GO:GO:0021520 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
GO:GO:0060913 GO:GO:0060379 GO:GO:0090074 GO:GO:0048880
GO:GO:0021524 EMBL:S69329 EMBL:AY557632 EMBL:X53258 IPI:IPI00201439
IPI:IPI00417237 PIR:I67417 RefSeq:NP_059035.3 UniGene:Rn.36202
ProteinModelPortal:P61374 SMR:P61374 STRING:P61374
PhosphoSite:P61374 PRIDE:P61374 Ensembl:ENSRNOT00000017305
GeneID:64444 KEGG:rno:64444 InParanoid:P61374 NextBio:613174
Genevestigator:P61374 GermOnline:ENSRNOG00000012556 Uniprot:P61374
Length = 349
Score = 179 (68.1 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 73 RLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 132
Query: 673 Y 673
+
Sbjct: 133 H 133
Score = 134 (52.2 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 183 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 68 (29.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRL 74
>UNIPROTKB|F1PP21 [details] [associations]
symbol:ISL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:TDMGDMG EMBL:AAEX03003122
Ensembl:ENSCAFT00000029303 Uniprot:F1PP21
Length = 360
Score = 179 (68.1 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 83 RLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 142
Query: 673 Y 673
+
Sbjct: 143 H 143
Score = 134 (52.2 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 193 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 68 (29.0 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 27 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRL 84
>ZFIN|ZDB-GENE-980526-484 [details] [associations]
symbol:lhx5 "LIM homeobox 5" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP;IDA] [GO:0001654 "eye development" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-484 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001654
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F EMBL:L42547
EMBL:BC098523 IPI:IPI00509409 RefSeq:NP_571293.1 UniGene:Dr.75068
ProteinModelPortal:P52889 SMR:P52889 STRING:P52889
Ensembl:ENSDART00000080693 GeneID:30465 KEGG:dre:30465 CTD:64211
InParanoid:P52889 OMA:SHQGQEM NextBio:20806859 Bgee:P52889
Uniprot:P52889
Length = 399
Score = 192 (72.6 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCLQGISPSDLVRRARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK 116
Query: 671 SHYL 674
YL
Sbjct: 117 EDYL 120
Score = 122 (48.0 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRGPRR 257
Score = 40 (19.1 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 613 RSFGAKCSKCC 623
R++ AKC +CC
Sbjct: 23 RAWHAKCVQCC 33
>UNIPROTKB|F1SMF7 [details] [associations]
symbol:ISL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 OMA:TDMGDMG GO:GO:0048936 GO:GO:0060913
GO:GO:0060379 GO:GO:0048880 GO:GO:0021524 EMBL:CU915536
Ensembl:ENSSSCT00000018387 Uniprot:F1SMF7
Length = 361
Score = 179 (68.1 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 85 RLYGIKCAKCSIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 144
Query: 673 Y 673
+
Sbjct: 145 H 145
Score = 134 (52.2 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 192 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 250
Score = 130 (50.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 195 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 250
Score = 68 (29.0 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 29 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRL 86
>UNIPROTKB|Q5ISK2 [details] [associations]
symbol:Q5ISK2 "LIM homeobox protein 1" species:9541 "Macaca
fascicularis" [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0001657 "ureteric bud development"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0008045 "motor
neuron axon guidance" evidence=ISS] [GO:0009653 "anatomical
structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009880 "embryonic pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY650378 ProteinModelPortal:Q5ISK2
Uniprot:Q5ISK2
Length = 403
Score = 191 (72.3 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 53 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 112
Query: 671 SHYL 674
YL
Sbjct: 113 EDYL 116
Score = 123 (48.4 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 175 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 234
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 181 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 236
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 237 QLSALGARRHAFFRSPRR 254
Score = 63 (27.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 1 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 52
Score = 39 (18.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 19 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 71
>UNIPROTKB|B7ZP59 [details] [associations]
symbol:lhx1 "Homeobox protein" species:8355 "Xenopus
laevis" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0072178 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077
RefSeq:NP_001084128.1 UniGene:Xl.32655 GeneID:399323
KEGG:xla:399323 Xenbase:XB-GENE-856460 EMBL:BC169338 EMBL:BC169340
SMR:B7ZP59 Uniprot:B7ZP59
Length = 403
Score = 191 (72.3 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 177 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 236
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 183 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 238
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 239 QLSALGARRHAFFRSPRR 256
Score = 62 (26.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCERPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
>UNIPROTKB|P29674 [details] [associations]
symbol:lhx1 "LIM/homeobox protein Lhx1" species:8355
"Xenopus laevis" [GO:0003002 "regionalization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0009798 "axis specification" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0030903 "notochord
development" evidence=IMP] [GO:0035565 "regulation of pronephros
size" evidence=IGI] [GO:0039003 "pronephric field specification"
evidence=IGI] [GO:0039020 "pronephric nephron tubule development"
evidence=IGI] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043009 "chordate embryonic development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0048793 "pronephros development" evidence=IGI;IMP] [GO:0072080
"nephron tubule development" evidence=IGI] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0022008 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0007517 GO:GO:0042074 GO:GO:0009798 GO:GO:0043009
GO:GO:0030903 GO:GO:0039020 GO:GO:0035565 CTD:3975
HOVERGEN:HBG006263 KO:K09372 EMBL:X63889 EMBL:AF013242 PIR:S23802
RefSeq:NP_001084128.1 UniGene:Xl.32655 ProteinModelPortal:P29674
SMR:P29674 GeneID:399323 KEGG:xla:399323 Xenbase:XB-GENE-856460
GO:GO:0039003 Uniprot:P29674
Length = 403
Score = 191 (72.3 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 177 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 236
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 183 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 238
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 239 QLSALGARRHAFFRSPRR 256
Score = 62 (26.9 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCERPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
>ZFIN|ZDB-GENE-980526-112 [details] [associations]
symbol:isl1 "islet1" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IMP]
[GO:0031017 "exocrine pancreas development" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IGI;IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0055011 "atrial cardiac muscle cell differentiation"
evidence=IMP] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-112 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0048665
GeneTree:ENSGT00700000104050 GO:GO:0031017 eggNOG:COG5576 CTD:3670
HOVERGEN:HBG004671 KO:K09370 EMBL:D21135 EMBL:AL954694
EMBL:BC060892 IPI:IPI00487340 PIR:I51739 RefSeq:NP_571037.1
UniGene:Dr.75106 ProteinModelPortal:P53405 SMR:P53405 STRING:P53405
Ensembl:ENSDART00000010896 GeneID:30147 KEGG:dre:30147
HOGENOM:HOG000236304 InParanoid:A2AWM5 OMA:TDMGDMG
OrthoDB:EOG4G4GQR NextBio:20806622 Bgee:P53405 GO:GO:0055011
GO:GO:0048936 Uniprot:P53405
Length = 349
Score = 177 (67.4 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 73 RLYGIKCAKCNIGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 132
Query: 673 Y 673
+
Sbjct: 133 H 133
Score = 135 (52.6 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 183 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 68 (29.0 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYIRL 74
>UNIPROTKB|F1NX79 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:2000543 "positive regulation of gastrulation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001706 "endoderm formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021871 "forebrain
regionalization" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0035852 "horizontal cell localization" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0060059 "embryonic retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0060067 "cervix development"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0060322 "head development" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0006366
GO:GO:0090190 GO:GO:0040019 GO:GO:2000768 GO:GO:2000543
GeneTree:ENSGT00700000104177 IPI:IPI00581331 GO:GO:0021937
GO:GO:2000744 OMA:PSEMNEG EMBL:AADN02025742 EMBL:AADN02025743
EMBL:AADN02025744 Ensembl:ENSGALT00000008686 Uniprot:F1NX79
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 127 (49.8 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLL 157
S+ + ++ ++ P LV + LE LL
Sbjct: 240 QLSALDARRHAFFRRPRMRPLVDR---LEHGELL 270
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>UNIPROTKB|P53411 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS;NAS] [GO:0090190
"positive regulation of branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009948 "anterior/posterior axis specification" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0072049 "comma-shaped body morphogenesis" evidence=ISS]
[GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0021517 "ventral spinal cord development"
evidence=IEP] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0060429 "epithelium
development" evidence=ISS] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEP] [GO:0008045 "motor neuron axon
guidance" evidence=IDA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0010468 "regulation
of gene expression" evidence=ISS] [GO:0021527 "spinal cord
association neuron differentiation" evidence=ISS] [GO:0072179
"nephric duct formation" evidence=NAS] [GO:2001141 "regulation of
RNA biosynthetic process" evidence=NAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021522 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 EMBL:L35569
IPI:IPI00581331 PIR:I50375 RefSeq:NP_990744.1 UniGene:Gga.789
ProteinModelPortal:P53411 SMR:P53411 STRING:P53411 GeneID:396381
KEGG:gga:396381 CTD:3975 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 InParanoid:P53411 KO:K09372 OrthoDB:EOG405S1F
NextBio:20816423 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 Uniprot:P53411
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>UNIPROTKB|A7Z015 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008045 "motor neuron axon guidance" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0010842 "retina layer
formation" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0021937 "cerebellar
Purkinje cell-granule cell precursor cell signaling involved in
regulation of granule cell precursor cell proliferation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0007267
"cell-cell signaling" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0001822 "kidney development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0001702 "gastrulation with
mouth forming second" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=ISS] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0035852 "horizontal cell localization"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001658 GO:GO:0001657
GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0021537
GO:GO:0001823 GO:GO:0090009 GO:GO:0060059 GO:GO:0048793
GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0001071
GO:GO:0021517 GO:GO:0001706 GO:GO:0032525 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:DAAA02048434 EMBL:BC153212 IPI:IPI00711186
RefSeq:NP_001098917.1 RefSeq:XP_003583582.1 UniGene:Bt.104440
Ensembl:ENSBTAT00000047689 GeneID:616699 GeneID:786041
KEGG:bta:616699 KEGG:bta:786041 InParanoid:A7Z015 NextBio:20927654
Uniprot:A7Z015
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>UNIPROTKB|E2RMA8 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060429 "epithelium development"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0009880
"embryonic pattern specification" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:2000543
"positive regulation of gastrulation" evidence=ISS] [GO:0040019
"positive regulation of embryonic development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009653 "anatomical structure
morphogenesis" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0007267 "cell-cell signaling"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEA]
[GO:0072283 "metanephric renal vesicle morphogenesis" evidence=IEA]
[GO:0048793 "pronephros development" evidence=IEA] [GO:0035852
"horizontal cell localization" evidence=IEA] [GO:0035849 "nephric
duct elongation" evidence=IEA] [GO:0032525 "somite rostral/caudal
axis specification" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190
GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880
GO:GO:0001658 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852 GO:GO:0072283
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:AAEX03006612
RefSeq:XP_003639347.1 ProteinModelPortal:E2RMA8 SMR:E2RMA8
Ensembl:ENSCAFT00000028326 GeneID:100856649 KEGG:cfa:100856649
NextBio:20895890 Uniprot:E2RMA8
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>UNIPROTKB|P48742 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0021537 "telencephalon development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0035502 "metanephric part of
ureteric bud development" evidence=IEA] [GO:0035849 "nephric duct
elongation" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0044344 "cellular response to
fibroblast growth factor stimulus" evidence=IEA] [GO:0048793
"pronephros development" evidence=IEA] [GO:0072177 "mesonephric
duct development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072278 "metanephric comma-shaped
body morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal
vesicle morphogenesis" evidence=IEA] [GO:0072284 "metanephric
S-shaped body morphogenesis" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001655 "urogenital system development" evidence=ISS]
[GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0021549
"cerebellum development" evidence=ISS] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:0072077 "renal vesicle morphogenesis"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=ISS] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0060429 "epithelium development"
evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0040019 "positive regulation of embryonic
development" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0009887 "organ
morphogenesis" evidence=TAS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0060068 GO:GO:0021537 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG EMBL:U14755 EMBL:AC023315
EMBL:AC025882 EMBL:BC111936 EMBL:BC101674 IPI:IPI00550117
PIR:G01507 RefSeq:NP_005559.2 UniGene:Hs.443727
ProteinModelPortal:P48742 SMR:P48742 STRING:P48742
PhosphoSite:P48742 DMDM:60416412 PaxDb:P48742 PRIDE:P48742
DNASU:3975 Ensembl:ENST00000254457 GeneID:3975 KEGG:hsa:3975
UCSC:uc002hnh.2 GeneCards:GC17P035294 HGNC:HGNC:6593 HPA:CAB002770
MIM:601999 neXtProt:NX_P48742 PharmGKB:PA30364 InParanoid:P48742
PhylomeDB:P48742 GenomeRNAi:3975 NextBio:15580 ArrayExpress:P48742
Bgee:P48742 CleanEx:HS_LHX1 Genevestigator:P48742
GermOnline:ENSG00000132130 GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 Uniprot:P48742
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>UNIPROTKB|F2Z531 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000543 "positive regulation of
gastrulation" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] [GO:0060322 "head
development" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060067 "cervix development" evidence=IEA]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0048793 "pronephros development" evidence=IEA]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0035849 "nephric duct elongation"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0021871 "forebrain regionalization" evidence=IEA] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IEA]
[GO:0021537 "telencephalon development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0045892 GO:GO:0001764 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0021517 GO:GO:0001706 GO:GO:0032525
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:CU929499 RefSeq:XP_003131754.1 UniGene:Ssc.22980
ProteinModelPortal:F2Z531 SMR:F2Z531 Ensembl:ENSSSCT00000019256
GeneID:100513681 KEGG:ssc:100513681 Uniprot:F2Z531
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>UNIPROTKB|P63008 [details] [associations]
symbol:Lhx1 "LIM/homeobox protein Lhx1" species:10036
"Mesocricetus auratus" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:X81407 PIR:I48186
ProteinModelPortal:P63008 SMR:P63008 Uniprot:P63008
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>UNIPROTKB|Q5IS44 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9598 "Pan
troglodytes" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665284 RefSeq:NP_001029088.1
UniGene:Ptr.6553 ProteinModelPortal:Q5IS44 SMR:Q5IS44 GeneID:454600
KEGG:ptr:454600 InParanoid:Q5IS44 NextBio:20836212 Uniprot:Q5IS44
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>UNIPROTKB|Q5IS89 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:39432
"Saimiri boliviensis boliviensis" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665239 RefSeq:XP_003929119.1
ProteinModelPortal:Q5IS89 SMR:Q5IS89 GeneID:101033157
Uniprot:Q5IS89
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>MGI|MGI:99783 [details] [associations]
symbol:Lhx1 "LIM homeobox protein 1" species:10090 "Mus
musculus" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=IGI;IMP] [GO:0001655 "urogenital system
development" evidence=IMP] [GO:0001657 "ureteric bud development"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001705 "ectoderm formation" evidence=IGI]
[GO:0001706 "endoderm formation" evidence=IMP] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0001822 "kidney development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007267 "cell-cell
signaling" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI;IMP] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0009880
"embryonic pattern specification" evidence=IGI] [GO:0009948
"anterior/posterior axis specification" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IGI]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0021527
"spinal cord association neuron differentiation" evidence=IGI]
[GO:0021549 "cerebellum development" evidence=IGI] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IGI]
[GO:0021871 "forebrain regionalization" evidence=IGI] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IMP] [GO:0035846 "oviduct epithelium
development" evidence=IMP] [GO:0035847 "uterine epithelium
development" evidence=IMP] [GO:0035849 "nephric duct elongation"
evidence=IMP] [GO:0035852 "horizontal cell localization"
evidence=IMP] [GO:0040019 "positive regulation of embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=IGI;IMP] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IMP] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0060065 "uterus development" evidence=IMP] [GO:0060066 "oviduct
development" evidence=IMP] [GO:0060067 "cervix development"
evidence=IMP] [GO:0060068 "vagina development" evidence=IMP]
[GO:0060322 "head development" evidence=IGI] [GO:0060429
"epithelium development" evidence=IMP] [GO:0061205 "paramesonephric
duct development" evidence=IMP] [GO:0072001 "renal system
development" evidence=IGI] [GO:0072049 "comma-shaped body
morphogenesis" evidence=IMP] [GO:0072050 "S-shaped body
morphogenesis" evidence=IMP] [GO:0072077 "renal vesicle
morphogenesis" evidence=IMP] [GO:0072178 "nephric duct
morphogenesis" evidence=IMP] [GO:0090009 "primitive streak
formation" evidence=IMP] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IMP]
[GO:2000543 "positive regulation of gastrulation" evidence=IMP]
[GO:2000744 "positive regulation of anterior head development"
evidence=IMP] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
MGI:MGI:99783 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0044344
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0021517
GO:GO:0001706 GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GO:GO:0072049 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG
GO:GO:0060067 GO:GO:0035852 GO:GO:0072177 GO:GO:0072278
GO:GO:0072283 GO:GO:0072284 GO:GO:0035849 GO:GO:0035846
GO:GO:0035847 EMBL:Z27410 EMBL:S68107 EMBL:AF039706 EMBL:AF039705
IPI:IPI00119516 PIR:I48637 RefSeq:NP_032524.1 UniGene:Mm.4965
ProteinModelPortal:P63006 SMR:P63006 STRING:P63006 PRIDE:P63006
Ensembl:ENSMUST00000018842 GeneID:16869 KEGG:mmu:16869
InParanoid:P63006 NextBio:290830 Bgee:P63006 CleanEx:MM_LHX1
Genevestigator:P63006 GermOnline:ENSMUSG00000018698 Uniprot:P63006
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>RGD|71074 [details] [associations]
symbol:Lhx1 "LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISO;ISS] [GO:0001655 "urogenital system development"
evidence=ISO;ISS] [GO:0001657 "ureteric bud development"
evidence=ISO;ISS] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISO;ISS] [GO:0001705 "ectoderm formation"
evidence=ISO;ISS] [GO:0001706 "endoderm formation" evidence=ISO;ISS]
[GO:0001764 "neuron migration" evidence=ISO;ISS] [GO:0001822 "kidney
development" evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0007267 "cell-cell signaling"
evidence=ISO;ISS] [GO:0007389 "pattern specification process"
evidence=ISO;ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISO;ISS]
[GO:0009791 "post-embryonic development" evidence=ISO;ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISO;ISS]
[GO:0009948 "anterior/posterior axis specification"
evidence=ISO;ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO;ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO;ISS] [GO:0010468 "regulation of gene
expression" evidence=ISO;ISS] [GO:0010842 "retina layer formation"
evidence=ISO;ISS] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISO;ISS] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=ISO;ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISO;ISS] [GO:0021871 "forebrain
regionalization" evidence=ISO;ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=ISO;ISS]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA;ISO] [GO:0035502 "metanephric part of ureteric bud
development" evidence=IEP] [GO:0035846 "oviduct epithelium
development" evidence=ISO;ISS] [GO:0035847 "uterine epithelium
development" evidence=ISO;ISS] [GO:0035849 "nephric duct elongation"
evidence=IEA;ISO] [GO:0035852 "horizontal cell localization"
evidence=IEA;ISO] [GO:0040019 "positive regulation of embryonic
development" evidence=ISO;ISS] [GO:0043234 "protein complex"
evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044344 "cellular response to fibroblast growth
factor stimulus" evidence=IEP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0048646 "anatomical structure formation
involved in morphogenesis" evidence=ISO;ISS] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISO;ISS] [GO:0048793
"pronephros development" evidence=IEA] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISO;ISS] [GO:0060065
"uterus development" evidence=ISO;ISS] [GO:0060066 "oviduct
development" evidence=ISO;ISS] [GO:0060067 "cervix development"
evidence=ISO;ISS] [GO:0060068 "vagina development" evidence=ISO;ISS]
[GO:0060322 "head development" evidence=ISO;ISS] [GO:0060429
"epithelium development" evidence=ISO;ISS] [GO:0061205
"paramesonephric duct development" evidence=ISO;ISS] [GO:0072001
"renal system development" evidence=ISO] [GO:0072049 "comma-shaped
body morphogenesis" evidence=ISO;ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISO;ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISO;ISS] [GO:0072164 "mesonephric tubule
development" evidence=IEP] [GO:0072177 "mesonephric duct
development" evidence=IEP] [GO:0072178 "nephric duct morphogenesis"
evidence=ISO;ISS] [GO:0072224 "metanephric glomerulus development"
evidence=IEP] [GO:0072278 "metanephric comma-shaped body
morphogenesis" evidence=IEP] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEP] [GO:0090009 "primitive streak
formation" evidence=ISO;ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISO;ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISO;ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISO;ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISO;ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:71074 GO:GO:0005634 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0090009 GO:GO:0060059
GO:GO:0035502 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GeneTree:ENSGT00700000104177 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:S71523
IPI:IPI00199573 RefSeq:NP_665887.3 UniGene:Rn.127825
ProteinModelPortal:P63007 SMR:P63007 STRING:P63007
PhosphoSite:P63007 PRIDE:P63007 Ensembl:ENSRNOT00000003799
GeneID:257634 KEGG:rno:257634 InParanoid:P63007 NextBio:624166
Genevestigator:P63007 GermOnline:ENSRNOG00000002812 Uniprot:P63007
Length = 406
Score = 191 (72.3 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 123 (48.4 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 63 (27.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCKRPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
Score = 39 (18.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 11/53 (20%), Positives = 23/53 (43%)
Query: 613 RSFGAKCSKCCR---GIASSDWVRKARDHVYH--LACFA--CEACKRQLSTGE 658
R++ KC +CC + + R+ + + + CF C C + +S +
Sbjct: 22 RAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSD 74
>ZFIN|ZDB-GENE-040624-1 [details] [associations]
symbol:isl1l "islet1, like" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-040624-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOVERGEN:HBG004671
HOGENOM:HOG000236304 eggNOG:NOG295777 EMBL:AY423019 IPI:IPI00495237
RefSeq:NP_001002043.1 UniGene:Dr.156646 ProteinModelPortal:Q6TEN0
SMR:Q6TEN0 GeneID:415131 KEGG:dre:415131 CTD:415131
NextBio:20818810 Uniprot:Q6TEN0
Length = 323
Score = 247 (92.0 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 52/162 (32%), Positives = 85/162 (52%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
+KC+KC + S ++V +++ ++YH+ CF CE C R L +G+E+ L + ++LC H+ +L
Sbjct: 79 SKCAKCDKAFISKEFVMRSQVNIYHVQCFRCEGCNRPLLSGDEYVLQDGQLLCTDHHNKL 138
Query: 677 VXXXXXXX-----------XXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPD 725
+ +A RVRT +E QL +LQ + + PD
Sbjct: 139 MSASINQQKEAGDPSEEIKSTLSWSSMQRRSERATRVRTVLSETQLCMLQTCYTANPRPD 198
Query: 726 GQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQ 767
E++ ++TGLS RV +VWFQN R + KK T M+ +Q
Sbjct: 199 ALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSLT--MRHTQ 238
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
RVRT +E QL +LQ + + PD E++ ++TGLS RV +VWFQN R + KK T
Sbjct: 174 RVRTVLSETQLCMLQTCYTANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSLT 233
Query: 122 GKMKSSQNR 130
M+ +Q +
Sbjct: 234 --MRHTQKQ 240
>UNIPROTKB|P50211 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:L35567
IPI:IPI00598855 PIR:I50369 RefSeq:NP_990745.1 UniGene:Gga.1507
ProteinModelPortal:P50211 SMR:P50211 GeneID:396383 KEGG:gga:396383
CTD:3670 HOVERGEN:HBG004671 KO:K09370 NextBio:20816425
Uniprot:P50211
Length = 349
Score = 177 (67.4 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R +G KC+KC G + +D+V +AR VYH+ CF C AC RQL G+EFAL ED + C++
Sbjct: 73 RLYGIKCAKCSIGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDGLFCRAD 132
Query: 673 Y 673
+
Sbjct: 133 H 133
Score = 134 (52.2 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 183 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 238
Score = 66 (28.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C I +R + D +H AC C C + L + + + CK Y+ L
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIRL 74
>UNIPROTKB|P37137 [details] [associations]
symbol:lhx5 "LIM/homeobox protein Lhx5" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 KO:K09372 CTD:64211 EMBL:L42546 EMBL:BC084744
EMBL:Z11587 PIR:S23803 RefSeq:NP_001084038.1 UniGene:Xl.1047
ProteinModelPortal:P37137 SMR:P37137 GeneID:399270 KEGG:xla:399270
Xenbase:XB-GENE-865965 Uniprot:P37137
Length = 402
Score = 190 (71.9 bits), Expect = 9.7e-20, Sum P(2) = 9.7e-20
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C GI+ SD VRKAR+ V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 57 FRRFGTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCK 116
Query: 671 SHYL 674
Y+
Sbjct: 117 EDYI 120
Score = 121 (47.7 bits), Expect = 9.7e-20, Sum P(2) = 9.7e-20
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 TKRRGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 237
Score = 121 (47.7 bits), Expect = 0.00043, P = 0.00043
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 184 RTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 239
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 240 QLSALGARRHAFFRSPRR 257
Score = 65 (27.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 3 AHCAGCERPILDR-FLLNVLDRAWHVKCVQCCECKCNLT--EKCFSREGKLYCKTDF 56
>FB|FBgn0026411 [details] [associations]
symbol:Lim1 species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0007479 "leg disc proximal/distal pattern
formation" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005525
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
EMBL:AE014298 GO:GO:0043565 GO:GO:0008270 GO:GO:0003924
GO:GO:0006184 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007480 GO:GO:0007479 FlyBase:FBgn0260444
HSSP:P06601 GeneTree:ENSGT00700000104177 eggNOG:NOG257130 KO:K09372
EMBL:AF181631 EMBL:AB034690 RefSeq:NP_572505.1 UniGene:Dm.3025
SMR:Q9V472 IntAct:Q9V472 MINT:MINT-756444 STRING:Q9V472
EnsemblMetazoa:FBtr0071279 GeneID:31813 KEGG:dme:Dmel_CG11354
UCSC:CG11354-RA CTD:31813 FlyBase:FBgn0026411 InParanoid:Q9V472
OMA:GARKMRG OrthoDB:EOG48W9H7 GenomeRNAi:31813 NextBio:775444
Uniprot:Q9V472
Length = 505
Score = 194 (73.4 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 605 RLSVLIC----FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE- 659
R S L C FR +G KCS C +GIA SD VRK RD V+HL CF C C++QLSTGE+
Sbjct: 68 RESKLYCRNDFFRRYGTKCSGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQL 127
Query: 660 FALHEDRVLCKSHYL 674
+ L +++ +CK YL
Sbjct: 128 YVLDDNKFICKDDYL 142
Score = 126 (49.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 33/100 (33%), Positives = 47/100 (47%)
Query: 34 LDSNPDGFGXXXXXXXXXXXXXXXXXXXRVRTTFTEEQLQVLQANFQLDSNPDGQDLERI 93
LD +PDG G RTT +QL+VL+ F P E++
Sbjct: 222 LDGDPDGRGDSQAENKSPDDANGSKRRGP-RTTIKAKQLEVLKTAFNQTPKPTRHIREQL 280
Query: 94 AQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNRPKY 133
A+ TGL RV QVWFQN R+++++ K +S RP +
Sbjct: 281 AKETGLPMRVIQVWFQNKRSKERRM----KQITSMGRPPF 316
Score = 121 (47.7 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
SK + RTT +QL+VL+ F P E++A+ TGL RV QVWFQN R+++++
Sbjct: 245 SKRRGPRTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR 304
Score = 47 (21.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 574 RLRGTRQIVKPYGFDDGAGLMY 595
++RG + P G DDG G Y
Sbjct: 322 KMRGFPMNLSPGGLDDGPGFPY 343
>UNIPROTKB|F1N4F7 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:DAAA02032139 IPI:IPI00694069 Ensembl:ENSBTAT00000038767
Uniprot:F1N4F7
Length = 294
Score = 169 (64.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK
Sbjct: 1 RLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGD 60
Query: 673 Y 673
Y
Sbjct: 61 Y 61
Score = 135 (52.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 110 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 168
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 113 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 172
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 173 HQ-QQQEQQNSQRLG 186
>UNIPROTKB|F1RS26 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035265 "organ growth" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0021587 "cerebellum
morphogenesis" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GO:GO:0008283 GO:GO:0008219
GO:GO:0071542 GO:GO:0043565 GO:GO:0008270 GO:GO:0030199
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901 GO:GO:0035265
GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GeneTree:ENSGT00700000104050 GO:GO:0021587 OMA:NRMEGMM
EMBL:CU062602 Ensembl:ENSSSCT00000006164 Uniprot:F1RS26
Length = 294
Score = 169 (64.5 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK
Sbjct: 1 RLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGD 60
Query: 673 Y 673
Y
Sbjct: 61 Y 61
Score = 135 (52.6 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 110 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 168
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 113 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 172
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 173 HQ-QQQEQQNSQRLG 186
>ZFIN|ZDB-GENE-980526-347 [details] [associations]
symbol:lhx1a "LIM homeobox 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0001071 "nucleic acid
binding transcription factor activity" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0043234
"protein complex" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0060059 "embryonic
retina morphogenesis in camera-type eye" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072178
"nephric duct morphogenesis" evidence=ISS] [GO:0090009 "primitive
streak formation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0021871 "forebrain regionalization"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-347 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 EMBL:L37802 IPI:IPI00485723 RefSeq:NP_571291.1
UniGene:Dr.364 ProteinModelPortal:Q90476 SMR:Q90476 STRING:Q90476
Ensembl:ENSDART00000005641 GeneID:30463 KEGG:dre:30463 CTD:30463
InParanoid:Q90476 OMA:PSEMNEG NextBio:20806857 ArrayExpress:Q90476
Bgee:Q90476 Uniprot:Q90476
Length = 405
Score = 188 (71.2 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR FG KC+ C +GI+ +D VR+AR V+HL CF C C +QLSTGEE + + E++ +CK
Sbjct: 56 FRRFGTKCAGCAQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 DDYL 119
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 183 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 238
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 239 QLSALGARRHAFFRSPRR 256
Score = 122 (48.0 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 178 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 236
Score = 63 (27.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H+ C C CK L+ E+ E ++ CK+ +
Sbjct: 4 CAGCERPILDR-FLLNVLDRAWHIKCVQCCECKCNLT--EKCFSREGKLYCKNDF 55
>UNIPROTKB|H9L043 [details] [associations]
symbol:H9L043 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02053375
Ensembl:ENSGALT00000021923 OMA:CECERRL Uniprot:H9L043
Length = 280
Score = 243 (90.6 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 57/160 (35%), Positives = 82/160 (51%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F KCS C + IA S+ + + ++VYH+ CF C C+R+L G+EF L E ++LC+S
Sbjct: 1 RLFQTKCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSD 60
Query: 673 Y--------------LELVXXXXXXXXXXXXXXXXXXKS--KAKRVRTTFTEEQLQVLQA 716
Y E V K ++KR RT T +Q + +A
Sbjct: 61 YEKEKEMLSAISPAPTESVKSEDEDGGHSHGKGSEDSKDHKRSKRPRTILTTQQRRAFKA 120
Query: 717 NFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+F++ S P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 121 SFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKK 160
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T +Q + +A+F++ S P + E +A TGL+ RV QVWFQN RA+ KK
Sbjct: 105 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLTVRVVQVWFQNQRAKMKKIARR 164
Query: 122 GKMKSSQNR 130
+ + Q +
Sbjct: 165 QQQQQQQQQ 173
>ZFIN|ZDB-GENE-980526-116 [details] [associations]
symbol:lhx1b "LIM homeobox 1b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-116 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HSSP:P06601 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263
EMBL:BX255908 EMBL:AF001299 EMBL:BC162280 EMBL:BC162303
IPI:IPI00505711 RefSeq:NP_571282.1 UniGene:Dr.277
Ensembl:ENSDART00000021159 GeneID:30454 KEGG:dre:30454 CTD:30454
InParanoid:O13106 OrthoDB:EOG49CQ7Z NextBio:20806849 Uniprot:O13106
Length = 402
Score = 187 (70.9 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 35/64 (54%), Positives = 43/64 (67%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCK 670
FR +G KC C +GI+ SD VRKAR V+HL CF C C +QLSTGEE + L E + +CK
Sbjct: 56 FRRYGTKCGGCAQGISPSDLVRKARSKVFHLNCFTCIMCNKQLSTGEELYILDEYKFVCK 115
Query: 671 SHYL 674
YL
Sbjct: 116 EDYL 119
Score = 122 (48.0 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 177 KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 235
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 182 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 235
Score = 61 (26.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C+ C R I ++ D +H C C CK L T F+ E R+ CK+ +
Sbjct: 4 CAGCERPILDR-FLLSVLDRAWHAKCVQCCDCKCSL-TDRCFS-REGRLYCKNDF 55
Score = 43 (20.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 600 ILLKGRLSVLICFRSFGAKCSKCC 623
IL + LSVL R++ AKC +CC
Sbjct: 11 ILDRFLLSVLD--RAWHAKCVQCC 32
>UNIPROTKB|Q6PVU4 [details] [associations]
symbol:Q6PVU4 "Lim1" species:9986 "Oryctolagus cuniculus"
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702 HSSP:P10037
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263
OrthoDB:EOG405S1F GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY575212 UniGene:Ocu.3134
ProteinModelPortal:Q6PVU4 Uniprot:Q6PVU4
Length = 348
Score = 181 (68.8 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEE-FALHEDRVLCKSHY 673
FG KC+ C +GI+ SD VR+AR V+HL CF C C +QLSTGEE + + E++ +CK Y
Sbjct: 1 FGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDY 60
Query: 674 L 674
L
Sbjct: 61 L 61
Score = 123 (48.4 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+K + RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++
Sbjct: 120 AKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 179
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGK 123
RTT +QL+ L+A F P E++AQ TGL+ RV QVWFQN R+++++ K
Sbjct: 126 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM----K 181
Query: 124 MKSSQNRPKYGYYPEPNK 141
S+ ++ ++ P +
Sbjct: 182 QLSALGARRHAFFRSPRR 199
>UNIPROTKB|F1S229 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CU179728
Ensembl:ENSSSCT00000006937 Uniprot:F1S229
Length = 295
Score = 166 (63.5 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK
Sbjct: 1 RLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGD 60
Query: 673 Y 673
Y
Sbjct: 61 Y 61
Score = 135 (52.6 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 107 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 165
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 110 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 165
>UNIPROTKB|I3L863 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 OMA:GNAGMEG EMBL:CU179728 Ensembl:ENSSSCT00000032564
Uniprot:I3L863
Length = 296
Score = 166 (63.5 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK
Sbjct: 1 RLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGD 60
Query: 673 Y 673
Y
Sbjct: 61 Y 61
Score = 135 (52.6 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 107 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 165
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 110 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 165
>UNIPROTKB|Q68EY3 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:8355
"Xenopus laevis" [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
KO:K09373 HOVERGEN:HBG006262 HSSP:P61969 EMBL:BC080067
RefSeq:NP_001087527.1 UniGene:Xl.28959 ProteinModelPortal:Q68EY3
SMR:Q68EY3 GeneID:447351 KEGG:xla:447351 CTD:447351
Xenbase:XB-GENE-866119 Uniprot:Q68EY3
Length = 331
Score = 166 (63.5 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
+C++C GI++S+ V +AR+ VYHL+CF C C + LSTG++F + E+ V C+ H+ LV
Sbjct: 133 RCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDQFGMKENLVYCRIHFELLV 192
Score = 125 (49.1 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV Q
Sbjct: 267 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 313
Score = 63 (27.2 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 15/51 (29%), Positives = 20/51 (39%)
Query: 623 CRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
C G S + A D +HL C C CK L + + + CK Y
Sbjct: 76 CGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDY 126
Score = 51 (23.0 bits), Expect = 3.4e-19, Sum P(3) = 3.4e-19
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 395 PTYCDGCGGEMS 406
PT C GCGG++S
Sbjct: 70 PTLCAGCGGKIS 81
>UNIPROTKB|P53413 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
EMBL:L39880 EMBL:U41823 IPI:IPI00599399 RefSeq:NP_990689.1
UniGene:Gga.758 ProteinModelPortal:P53413 STRING:P53413
GeneID:396312 KEGG:gga:396312 CTD:4010 InParanoid:P53413
NextBio:20816360 Uniprot:P53413
Length = 377
Score = 171 (65.3 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 146
Score = 135 (52.6 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 194 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 197 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 256
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 257 HQ-QQQEQQNSQRLG 270
Score = 74 (31.1 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I S ++ + + +H C C C++ L+T F + ++ CK Y +L
Sbjct: 31 AVCEGCQRPI-SDRFLMRVNESSWHEECLQCAVCQQALTTSCYF--RDRKLYCKQDYQQL 87
>UNIPROTKB|F1NDZ5 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002930 "trabecular meshwork
development" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021587
"cerebellum morphogenesis" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0035108 "limb morphogenesis"
evidence=IEA] [GO:0035265 "organ growth" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0008219 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0035265
GeneTree:ENSGT00700000104050 IPI:IPI00599399 OMA:NRMEGMM
EMBL:AADN02026296 EMBL:AADN02026297 EMBL:AADN02026298
EMBL:AADN02031658 Ensembl:ENSGALT00000001376 Uniprot:F1NDZ5
Length = 377
Score = 171 (65.3 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 146
Score = 135 (52.6 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 194 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 197 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 256
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 257 HQ-QQQEQQNSQRLG 270
Score = 68 (29.0 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I ++ + + +H C C C++ L+T F + ++ CK Y +L
Sbjct: 32 AVCEGCQRPI--DRFLMRVNESSWHEECLQCAVCQQALTTSCYF--RDRKLYCKQDYQQL 87
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 166 (63.5 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 43 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 101
Score = 135 (52.6 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 150 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 208
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 153 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 212
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 213 HQ-QQQEQQNSQRLG 226
Score = 62 (26.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 634 KARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
+ + +H C C AC++ L+T F + ++ CK Y +L
Sbjct: 2 RVNESSWHEECLQCAACQQALTTSCYF--RDRKLYCKQDYQQL 42
>UNIPROTKB|E2R2S6 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:AAEX03005042 SMR:E2R2S6 Ensembl:ENSCAFT00000018020
Uniprot:E2R2S6
Length = 330
Score = 168 (64.2 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 184
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 185 AHFETLL 191
Score = 125 (49.1 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV Q
Sbjct: 266 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
Score = 64 (27.6 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 69 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
Score = 46 (21.3 bits), Expect = 6.3e-19, Sum P(3) = 6.3e-19
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 68 PALCAGCGGKIS 79
>UNIPROTKB|H0YL54 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:AL590115 HGNC:HGNC:14222
ProteinModelPortal:H0YL54 SMR:H0YL54 Ensembl:ENST00000561173
Bgee:H0YL54 Uniprot:H0YL54
Length = 336
Score = 168 (64.2 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL+CF C C + L+TG+ F + + V C+
Sbjct: 131 YRRFSVQRCARCHLGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCR 190
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 191 AHFETLL 197
Score = 125 (49.1 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV Q
Sbjct: 272 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 318
Score = 64 (27.6 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 75 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 130
Score = 46 (21.3 bits), Expect = 7.4e-19, Sum P(3) = 7.4e-19
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 74 PALCAGCGGKIS 85
>UNIPROTKB|H0YMA3 [details] [associations]
symbol:LHX6 "LIM/homeobox protein Lhx6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0021799 "cerebral cortex radially
oriented cell migration" evidence=IEA] [GO:0021800 "cerebral cortex
tangential migration" evidence=IEA] [GO:0021853 "cerebral cortex
GABAergic interneuron migration" evidence=IEA] [GO:0021877
"forebrain neuron fate commitment" evidence=IEA] [GO:0021884
"forebrain neuron development" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0021884 GO:GO:0021877
GO:GO:0021853 GO:GO:0021800 GO:GO:0048469 GO:GO:0021799
EMBL:AL162424 HGNC:HGNC:21735 Ensembl:ENST00000558672 Bgee:H0YMA3
Uniprot:H0YMA3
Length = 73
Score = 236 (88.1 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
F FG KC++C R I +SDWVR+AR + YHLACFAC +CKRQLSTGEEF L E++VLC+
Sbjct: 4 FSRFGTKCARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRI 63
Query: 672 HY 673
HY
Sbjct: 64 HY 65
>UNIPROTKB|Q8UVR3 [details] [associations]
symbol:lmx1b.1 "LIM homeobox transcription factor 1-beta.1"
species:8355 "Xenopus laevis" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0039020 "pronephric nephron tubule development"
evidence=IMP] [GO:0072013 "glomus development" evidence=IEP;IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0072013
GO:GO:0039020 HOVERGEN:HBG052335 KO:K09371 EMBL:AF414086
RefSeq:NP_001083902.1 UniGene:Xl.12464 HSSP:P50480
ProteinModelPortal:Q8UVR3 GeneID:399182 KEGG:xla:399182 CTD:399182
Xenbase:XB-GENE-494754 Uniprot:Q8UVR3
Length = 400
Score = 171 (65.3 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL+CF C C+RQL G+EF L E ++LCKS Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDY 169
Score = 132 (51.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 217 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKIKK 275
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 220 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKIKKLARR 279
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 280 HQ-QQQEQQNSQRLG 293
Score = 74 (31.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I S ++ + + +H C C C++ L+T F + ++ CK Y +L
Sbjct: 54 AVCEGCQRPI-SDRFLMRVNEASWHEECLQCTVCQQPLTTSCYF--RDRKLFCKQDYQQL 110
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 166 (63.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Score = 135 (52.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 195 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 198 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 257
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 258 HQ-QQQEQQNSQRLG 271
Score = 78 (32.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I S ++ + + +H C C AC++ L+T F + ++ CK Y +L
Sbjct: 31 AVCEGCQRPI-SDRFLMRVNESSWHEECLQCAACQQALTTSCYF--RDRKLYCKQDYQQL 87
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 166 (63.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Score = 135 (52.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 195 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 198 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 257
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 258 HQ-QQQEQQNSQRLG 271
Score = 78 (32.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I S ++ + + +H C C AC++ L+T F + ++ CK Y +L
Sbjct: 31 AVCEGCQRPI-SDRFLMRVNESSWHEECLQCAACQQALTTSCYF--RDRKLYCKQDYQQL 87
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 166 (63.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Score = 135 (52.6 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 195 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 198 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 257
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 258 HQ-QQQEQQNSQRLG 271
Score = 78 (32.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I S ++ + + +H C C AC++ L+T F + ++ CK Y +L
Sbjct: 31 AVCEGCQRPI-SDRFLMRVNESSWHEECLQCAACQQALTTSCYF--RDRKLYCKQDYQQL 87
>UNIPROTKB|B7ZLH2 [details] [associations]
symbol:LMX1B "LMX1B protein" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 HOGENOM:HOG000231629 HOVERGEN:HBG052335 KO:K09371
CTD:4010 EMBL:AL161908 EMBL:AL161731 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 PharmGKB:PA30417
GenomeRNAi:4010 NextBio:15732 EMBL:BC143801 IPI:IPI00956472
RefSeq:NP_001167617.1 SMR:B7ZLH2 STRING:B7ZLH2
Ensembl:ENST00000561065 Uniprot:B7ZLH2
Length = 383
Score = 166 (63.5 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 88 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 146
Score = 135 (52.6 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 195 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 253
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 198 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 257
Query: 120 HTGKMKSSQNRPKYGY-YPEPNK 141
H + + QN + G P P +
Sbjct: 258 HQ-QQQEQQNSQRLGQGEPGPGQ 279
Score = 78 (32.5 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I S ++ + + +H C C AC++ L+T F + ++ CK Y +L
Sbjct: 31 AVCEGCQRPI-SDRFLMRVNESSWHEECLQCAACQQALTTSCYF--RDRKLYCKQDYQQL 87
>UNIPROTKB|E1BSF2 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:AADN02033814 EMBL:AADN02033815 IPI:IPI00685016
Ensembl:ENSGALT00000034098 ArrayExpress:E1BSF2 Uniprot:E1BSF2
Length = 330
Score = 165 (63.1 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 26/67 (38%), Positives = 46/67 (68%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +AR+ VYHL+CF C C + L+TG+ F + ++ V C+
Sbjct: 125 YRRFSVQRCARCHLGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCR 184
Query: 671 SHYLELV 677
+H+ L+
Sbjct: 185 AHFESLL 191
Score = 125 (49.1 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQ 744
K KR+RT+F QL+ +++ F ++ NPD +DL+++AQ TGL+KRV Q
Sbjct: 266 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 312
Score = 64 (27.6 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
A C+ C G S + A D +HL C C CK L + + + CK Y
Sbjct: 69 ALCAGC-GGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDY 124
Score = 46 (21.3 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 395 PTYCDGCGGEMS 406
P C GCGG++S
Sbjct: 68 PALCAGCGGKIS 79
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 166 (63.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Score = 135 (52.6 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 218 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 132 (51.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 221 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 280
Query: 120 HTGKMKSSQNRPKYG 134
H + + QN + G
Sbjct: 281 HQ-QQQEQQNSQRLG 294
Score = 78 (32.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I S ++ + + +H C C AC++ L+T F + ++ CK Y +L
Sbjct: 54 AVCEGCQRPI-SDRFLMRVNESSWHEECLQCAACQQALTTSCYF--RDRKLYCKQDYQQL 110
>UNIPROTKB|F8W7W6 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
UniGene:Hs.129133 DNASU:4010 GeneID:4010 KEGG:hsa:4010
HGNC:HGNC:6654 GenomeRNAi:4010 NextBio:15732 OMA:NRMEGMM
IPI:IPI00956472 RefSeq:NP_001167617.1 ProteinModelPortal:F8W7W6
SMR:F8W7W6 Ensembl:ENST00000355497 UCSC:uc011maa.2
ArrayExpress:F8W7W6 Bgee:F8W7W6 Uniprot:F8W7W6
Length = 406
Score = 166 (63.5 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F AKCS C IA +++V +A + VYHL CF C C+RQL G+EF L E ++LCK Y
Sbjct: 111 FAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 169
Score = 135 (52.6 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 218 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 276
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 221 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 280
Query: 120 HTGKMKSSQNRPKYGY-YPEPNK 141
H + + QN + G P P +
Sbjct: 281 HQ-QQQEQQNSQRLGQGEPGPGQ 302
Score = 78 (32.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I S ++ + + +H C C AC++ L+T F + ++ CK Y +L
Sbjct: 54 AVCEGCQRPI-SDRFLMRVNESSWHEECLQCAACQQALTTSCYF--RDRKLYCKQDYQQL 110
>FB|FBgn0000099 [details] [associations]
symbol:ap "apterous" species:7227 "Drosophila melanogaster"
[GO:0007559 "histolysis" evidence=IMP] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0007472 "wing disc
morphogenesis" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;NAS] [GO:0007481 "haltere disc morphogenesis"
evidence=NAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP;TAS]
[GO:0007517 "muscle organ development" evidence=IMP;TAS]
[GO:0007479 "leg disc proximal/distal pattern formation"
evidence=IMP] [GO:0045165 "cell fate commitment" evidence=NAS]
[GO:0048190 "wing disc dorsal/ventral pattern formation"
evidence=IGI;IMP;TAS] [GO:0007451 "dorsal/ventral lineage
restriction, imaginal disc" evidence=TAS] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=TAS] [GO:0007450
"dorsal/ventral pattern formation, imaginal disc" evidence=TAS]
[GO:0036011 "imaginal disc-derived leg segmentation" evidence=IMP]
[GO:0035218 "leg disc development" evidence=IMP] [GO:0007526
"larval somatic muscle development" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0007411 GO:GO:0048190
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0007517 GO:GO:0007526 GO:GO:0007476 EMBL:X65158 EMBL:M92841
EMBL:AY069815 EMBL:BT005201 PIR:JH0718 RefSeq:NP_001163058.1
RefSeq:NP_001163059.1 RefSeq:NP_523621.2 RefSeq:NP_724428.1
UniGene:Dm.4746 ProteinModelPortal:P29673 SMR:P29673 DIP:DIP-23617N
IntAct:P29673 MINT:MINT-338208 STRING:P29673 PaxDb:P29673
PRIDE:P29673 EnsemblMetazoa:FBtr0086058 GeneID:35509
KEGG:dme:Dmel_CG8376 UCSC:CG8376-RA CTD:11763 FlyBase:FBgn0000099
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 InParanoid:P29673
KO:K09373 OMA:THYSIAR OrthoDB:EOG46Q57V PhylomeDB:P29673 ChiTaRS:ap
GenomeRNAi:35509 NextBio:793761 Bgee:P29673 GermOnline:CG8376
GO:GO:0000977 GO:GO:0045165 GO:GO:0007451 GO:GO:0007559
GO:GO:0036011 GO:GO:0007479 Uniprot:P29673
Length = 469
Score = 167 (63.8 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 29/60 (48%), Positives = 47/60 (78%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
S+ KR+RT+F QL+ +++ F ++ NPD +DL++++Q TGL KRV QVWFQN+RA+ ++
Sbjct: 365 SRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNARAKWRR 424
Score = 156 (60.0 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 27/56 (48%), Positives = 44/56 (78%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RT+F QL+ +++ F ++ NPD +DL++++Q TGL KRV QVWFQN+RA+ ++
Sbjct: 369 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNARAKWRR 424
Score = 135 (52.6 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 615 FGAK-CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
FG + CS+C I+S++ V +AR+ V+H+ CF C C L+ G+++ + + + C++HY
Sbjct: 205 FGTRRCSRCLASISSNELVMRARNLVFHVNCFCCTVCHTPLTKGDQYGIIDALIYCRTHY 264
Score = 71 (30.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
CS C R I ++ A + +H +C C AC++ L + + CK+ Y
Sbjct: 148 CSGCGRQIQDRFYL-SAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDY 201
>MGI|MGI:1888519 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10090 "Mus musculus" [GO:0001558 "regulation of cell
growth" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0007420
"brain development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0021542 "dentate gyrus development" evidence=IMP]
[GO:0021549 "cerebellum development" evidence=IMP] [GO:0021766
"hippocampus development" evidence=IMP] [GO:0021953 "central
nervous system neuron differentiation" evidence=IMP] [GO:0030182
"neuron differentiation" evidence=IMP] [GO:0030901 "midbrain
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1888519 GO:GO:0005634 GO:GO:0007411
GO:GO:0001558 GO:GO:0046872 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0010468 GeneTree:ENSGT00700000104050
GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953 CTD:4009
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN EMBL:AF226662 IPI:IPI00123446 RefSeq:NP_387501.1
UniGene:Mm.330081 ProteinModelPortal:Q9JKU8 SMR:Q9JKU8
STRING:Q9JKU8 PhosphoSite:Q9JKU8 PRIDE:Q9JKU8
Ensembl:ENSMUST00000028003 Ensembl:ENSMUST00000111377 GeneID:110648
KEGG:mmu:110648 InParanoid:Q9JKU8 NextBio:364391 Bgee:Q9JKU8
CleanEx:MM_LMX1A Genevestigator:Q9JKU8
GermOnline:ENSMUSG00000026686 Uniprot:Q9JKU8
Length = 382
Score = 163 (62.4 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Score = 135 (52.6 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 194 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 197 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 79 (32.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHYLEL 676
C C R + S ++ + D +H C C +CK L T + D+ L CK HY +L
Sbjct: 35 CEGCQR-VISDRFLLRLNDSFWHEQCVQCASCKEPLETT---CFYRDKKLYCKYHYEKL 89
>RGD|1304784 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10116 "Rattus norvegicus" [GO:0001558 "regulation of cell
growth" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA;ISO]
[GO:0007417 "central nervous system development" evidence=ISO]
[GO:0007420 "brain development" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0021542 "dentate gyrus development"
evidence=IEA;ISO] [GO:0021549 "cerebellum development"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=ISO] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 RGD:1304784
GO:GO:0005634 GO:GO:0007411 GO:GO:0007420 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021549 GO:GO:0030901
GeneTree:ENSGT00700000104050 GO:GO:0021542 GO:GO:0021953 CTD:4009
KO:K09371 OMA:GNAGMEG IPI:IPI00869778 RefSeq:NP_001099437.2
UniGene:Rn.137284 Ensembl:ENSRNOT00000006163 GeneID:289201
KEGG:rno:289201 NextBio:629386 ArrayExpress:F1LRJ8 Uniprot:F1LRJ8
Length = 382
Score = 163 (62.4 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Score = 135 (52.6 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 194 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 197 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 79 (32.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHYLEL 676
C C R + S ++ + D +H C C +CK L T + D+ L CK HY +L
Sbjct: 35 CEGCQR-VISDRFLLRLNDSFWHEQCVQCASCKEPLETT---CFYRDKKLYCKYHYEKL 89
>UNIPROTKB|F1MC25 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 CTD:4009 KO:K09371 OMA:GNAGMEG EMBL:DAAA02006817
EMBL:DAAA02006818 EMBL:DAAA02006819 EMBL:DAAA02006820
EMBL:DAAA02006821 EMBL:DAAA02006822 IPI:IPI00701360
RefSeq:NP_001178254.1 UniGene:Bt.106456 Ensembl:ENSBTAT00000015947
GeneID:510296 KEGG:bta:510296 NextBio:20869365 Uniprot:F1MC25
Length = 382
Score = 163 (62.4 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Score = 135 (52.6 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 194 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 197 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 70 (29.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHYLEL 676
C C R + S ++ + D +H C C +CK L T + D+ L CK Y +L
Sbjct: 35 CEGCQR-VISDRFLLRLNDSFWHEQCVQCASCKEPLETT---CFYRDKKLYCKYDYEKL 89
>UNIPROTKB|F1PDJ1 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 CTD:4009 KO:K09371 OMA:GNAGMEG
EMBL:AAEX03018391 EMBL:AAEX03018392 RefSeq:XP_851352.2
Ensembl:ENSCAFT00000021142 GeneID:609061 KEGG:cfa:609061
Uniprot:F1PDJ1
Length = 382
Score = 163 (62.4 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Score = 135 (52.6 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 194 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 197 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 70 (29.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHYLEL 676
C C R + S ++ + D +H C C +CK L T + D+ L CK Y +L
Sbjct: 35 CEGCQR-VISDRFLLRLNDSFWHEQCVQCASCKEPLETT---CFYRDKKLYCKYDYEKL 89
>UNIPROTKB|Q8TE12 [details] [associations]
symbol:LMX1A "LIM homeobox transcription factor 1-alpha"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001558 "regulation of cell growth" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021542 "dentate
gyrus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021953 "central nervous system
neuron differentiation" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 EMBL:CH471067 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953
EMBL:AY078398 EMBL:AY078391 EMBL:AY078392 EMBL:AY078393
EMBL:AY078394 EMBL:AY078395 EMBL:AY078396 EMBL:AY078397
EMBL:AK127724 EMBL:AL390730 EMBL:AL160058 EMBL:BC119743
EMBL:BC119744 IPI:IPI00152586 IPI:IPI00328299 RefSeq:NP_001167540.1
RefSeq:NP_796372.1 UniGene:Hs.667312 ProteinModelPortal:Q8TE12
SMR:Q8TE12 STRING:Q8TE12 PhosphoSite:Q8TE12 DMDM:27923801
PRIDE:Q8TE12 DNASU:4009 Ensembl:ENST00000294816
Ensembl:ENST00000342310 Ensembl:ENST00000367893 GeneID:4009
KEGG:hsa:4009 UCSC:uc001gcz.2 UCSC:uc021pdy.1 CTD:4009
GeneCards:GC01M165171 HGNC:HGNC:6653 HPA:HPA028051 HPA:HPA030088
MIM:600298 neXtProt:NX_Q8TE12 PharmGKB:PA30416 eggNOG:NOG243427
HOVERGEN:HBG052335 InParanoid:Q8TE12 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN PhylomeDB:Q8TE12 GenomeRNAi:4009 NextBio:15724
ArrayExpress:Q8TE12 Bgee:Q8TE12 CleanEx:HS_LMX1A
Genevestigator:Q8TE12 GermOnline:ENSG00000162761 Uniprot:Q8TE12
Length = 382
Score = 163 (62.4 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F KC C IA +++V +A+ VYHL+CF C C+RQL G+EF L E ++LCK Y
Sbjct: 90 FAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDY 148
Score = 135 (52.6 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 194 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 197 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 252
Score = 65 (27.9 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKSHYLEL 676
C C R I ++ + D +H C C +CK L T + D+ L CK Y +L
Sbjct: 35 CEGCQRVILDR-FLLRLNDSFWHEQCVQCASCKEPLETT---CFYRDKKLYCKYDYEKL 89
Score = 38 (18.4 bits), Expect = 5.0e-18, Sum P(3) = 5.0e-18
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 292 EKC-KVLVDSLLKQEQLNLQEHNQCVKNAINTELVRKETEYQEKQ 335
E C +V++D L + + H QCV+ A E + Y++K+
Sbjct: 36 EGCQRVILDRFLLRLNDSFW-HEQCVQCASCKEPLETTCFYRDKK 79
>ZFIN|ZDB-GENE-050114-2 [details] [associations]
symbol:lmx1bb "LIM homeobox transcription factor 1,
beta b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0042472
"inner ear morphogenesis" evidence=IMP] [GO:0021592 "fourth
ventricle development" evidence=IGI] [GO:0060117 "auditory receptor
cell development" evidence=IMP] [GO:0032474 "otolith morphogenesis"
evidence=IMP] [GO:0048752 "semicircular canal morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] [GO:0061386 "closure of optic fissure"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-050114-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0060041 GO:GO:0032474
GO:GO:0048752 GO:GO:0030917 GO:GO:0060117 GO:GO:0061386
GO:GO:0021592 HOVERGEN:HBG052335 KO:K09371 EMBL:AY894989
IPI:IPI00631669 RefSeq:NP_001020338.2 UniGene:Dr.108678
ProteinModelPortal:Q4VJ29 STRING:Q4VJ29 GeneID:554360
KEGG:dre:554360 CTD:554360 InParanoid:Q4VJ29 NextBio:20880753
Uniprot:Q4VJ29
Length = 375
Score = 159 (61.0 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F KCS C IA +++V +A + VYHL CF C C RQL G+EF L + ++LCKS Y
Sbjct: 88 FATKCSGCLEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKDGQLLCKSDY 146
Score = 135 (52.6 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 193 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 251
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 196 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 255
Query: 122 GKMKSSQ-NRPKYG 134
+ + Q N + G
Sbjct: 256 QQQQQEQQNSQRLG 269
Score = 75 (31.5 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C C R I S ++ + + +H C C C++ L+T F E ++ CK Y +L
Sbjct: 31 AVCEGCQRPI-SDRFLMRVNESSWHEECLQCAVCQQPLTTSCYF--RERKLYCKYDYQQL 87
>ZFIN|ZDB-GENE-070530-3 [details] [associations]
symbol:zfhx4 "zinc finger homeobox 4" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 ZFIN:ZDB-GENE-070530-3 GO:GO:0005634
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.160.60 GeneTree:ENSGT00530000063717
KO:K09380 EMBL:CR361560 EMBL:CT573302 IPI:IPI00616360
RefSeq:XP_684360.5 Ensembl:ENSDART00000112256
Ensembl:ENSDART00000135846 GeneID:556453 KEGG:dre:556453
NextBio:20881493 Uniprot:E7FCF7
Length = 3528
Score = 169 (64.5 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2524 KRLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2580
Score = 164 (62.8 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2525 RLRTTITPEQLEILYDKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2580
Score = 141 (54.7 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 54/167 (32%), Positives = 80/167 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2834 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2893
Query: 121 TGK-MKSSQNRPKYGYYPEPNKSFLVIK-PQFLEEASLLFHDLHVQIVTEKRFLGGVIGN 178
GK SQ P G P P + +K L +F H+ V E LG +
Sbjct: 2894 IGKPFMISQGSPD-G--PRPECTLCGVKYTARLSIRDHIFSKQHIAKVQET--LGNQV-- 2946
Query: 179 GDEKKNY-----VKEKV-NQWIDCVKKLSEAAKKSPQAAFSVVTKSL 219
D +K+Y V++ + Q +D +KK ++ Q +V +L
Sbjct: 2947 -DREKDYLAPTTVRQLMAQQELDRLKKATDVLNLPAQQQPAVDNNAL 2992
Score = 132 (51.5 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2833 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2892
Query: 759 HTGK 762
+ GK
Sbjct: 2893 NIGK 2896
Score = 117 (46.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
S + RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K
Sbjct: 2163 SNKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARK 2222
Score = 116 (45.9 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2169 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKTYENQA 2228
Query: 123 KMKSSQNR 130
K S+ +
Sbjct: 2229 DTKESEKK 2236
Score = 111 (44.1 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 17/56 (30%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A+F ++++P+ + ++ +A +GL ++V + WF+N+ ++++
Sbjct: 2070 RPRTRITDDQLKILRAHFDINNSPNEEQIQEMADKSGLPQKVIKHWFRNTLFKERQ 2125
Score = 83 (34.3 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ + + KR+RTT T EQL++L + LDSNP
Sbjct: 2516 SAEDQHRDKRLRTTITPEQLEILYDKYLLDSNP 2548
Score = 72 (30.4 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 12/30 (40%), Positives = 25/30 (83%)
Query: 10 KSKAKRVRTTFTEEQLQVLQANFQLDSNPD 39
+S+ KR RT T++QL++L+A+F ++++P+
Sbjct: 2065 QSQFKRPRTRITDDQLKILRAHFDINNSPN 2094
Score = 55 (24.4 bits), Expect = 9.2e-16, Sum P(3) = 9.2e-16
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 9 SKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S S + RT FT+ QL+VLQ F ++ P
Sbjct: 2161 SASNKRSSRTRFTDYQLRVLQDFFDTNAYP 2190
Score = 47 (21.6 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 304 QEQLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSSHWLN 363
Q+ L Q+H Q + +E RK + +SL P K+ V T+ +G S+ N
Sbjct: 3232 QDSLQKQQHQQQQQQK-QSEPQRKTPAPMKSTSAQSNSLKP-KETVETKDDKGSSTESTN 3289
Query: 364 VIPKSS 369
P+++
Sbjct: 3290 EEPQTN 3295
>ZFIN|ZDB-GENE-050114-3 [details] [associations]
symbol:lmx1ba "LIM homeobox transcription factor 1,
beta a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IMP] [GO:0021592 "fourth ventricle
development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-050114-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060041 GeneTree:ENSGT00700000104050 GO:GO:0030917
GO:GO:0061386 HOGENOM:HOG000231629 GO:GO:0021592 HOVERGEN:HBG052335
EMBL:BX511196 EMBL:CABZ01060115 EMBL:CABZ01060116 EMBL:CABZ01060117
EMBL:CABZ01060118 EMBL:CABZ01060119 EMBL:CABZ01084097
EMBL:CABZ01084098 EMBL:CABZ01084099 EMBL:CABZ01084100 EMBL:AY551078
IPI:IPI00616332 UniGene:Dr.94065 Ensembl:ENSDART00000126544
Uniprot:Q4L1M5
Length = 375
Score = 156 (60.0 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
F KCS C I+ ++ V +A + VYHL+CF C C+R+L G+EF L E ++LCK+ Y
Sbjct: 88 FATKCSGCLEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKEGQLLCKTDY 146
Score = 135 (52.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 191 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 249
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 194 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 253
Query: 122 GKMKSSQ-NRPKYG 134
+ + Q N + G
Sbjct: 254 QQQQQEQQNSQRLG 267
Score = 67 (28.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C R I S ++ + D +H C C C+ QL T ++ + ++ CK Y +L
Sbjct: 33 CEGCHRPI-SDRFLLRMNDSSWHEECLQCSVCQ-QLLTMSCYS-RDHKLYCKHDYQQL 87
>WB|WBGene00006654 [details] [associations]
symbol:ttx-3 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008355 "olfactory learning" evidence=IMP] [GO:0043052
"thermotaxis" evidence=IGI;IMP] [GO:0045664 "regulation of neuron
differentiation" evidence=IMP] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0040024 "dauer larval development" evidence=IGI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0040040 "thermosensory behavior"
evidence=IGI;IMP] [GO:0008306 "associative learning" evidence=IMP]
[GO:0022401 "negative adaptation of signaling pathway"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0045664
GO:GO:0008355 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0007409 GO:GO:0040024 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0040040 GO:GO:0043052 HSSP:P06601 GO:GO:0022401 EMBL:Z81482
UniGene:Cel.19674 GeneID:181357 KEGG:cel:CELE_C40H5.5 CTD:181357
EMBL:U72211 PIR:T19871 RefSeq:NP_001257168.1
ProteinModelPortal:G5EE86 SMR:G5EE86 EnsemblMetazoa:C40H5.5a
WormBase:C40H5.5a OMA:CRADHAK NextBio:913598 Uniprot:G5EE86
Length = 409
Score = 181 (68.8 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 33/69 (47%), Positives = 50/69 (72%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
++KR+RT+F QL+ ++ F L+ NPD +DL+++A T L+KRV QVWFQN+RA+ ++
Sbjct: 291 RSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQVWFQNARAKYRRE 350
Query: 758 LHTGKMKSS 766
LH G SS
Sbjct: 351 LHDGGRSSS 359
Score = 173 (66.0 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 32/66 (48%), Positives = 47/66 (71%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R+RT+F QL+ ++ F L+ NPD +DL+++A T L+KRV QVWFQN+RA+ ++ LH
Sbjct: 294 RMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQVWFQNARAKYRRELHD 353
Query: 122 GKMKSS 127
G SS
Sbjct: 354 GGRSSS 359
Score = 109 (43.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 605 RLSVLICFRSFGAKCSKCCRG----IASSDWVRKARDHVYHLACFACEACKRQLSTGEEF 660
R V +C + KCCR + D V KA++ ++H ACF C C +L+ G+ +
Sbjct: 153 RDGVFLCRADHAKRYQKCCRKCEIPLNREDMVMKAKEMIFHHACFVCFICGIKLNPGDYY 212
Query: 661 ALH-EDRVLCKSHY 673
+ + + C +HY
Sbjct: 213 TMSPQGHLYCHAHY 226
Score = 48 (22.0 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 10/56 (17%), Positives = 21/56 (37%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
+C C I + + YH C C+ C ++ + + LC++ +
Sbjct: 109 QCCLCTFAIVDKE-ISVVDGKYYHNNCLRCQMCDIPFEYSDKCYVRDGVFLCRADH 163
>WB|WBGene00002989 [details] [associations]
symbol:lim-7 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0060323 "head morphogenesis"
evidence=IMP] [GO:0007588 "excretion" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] [GO:0060465 "pharynx development"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0002119 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0040011 GO:GO:0007588
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060465 GeneTree:ENSGT00700000104050 GO:GO:0035262
GO:GO:0060323 KO:K09370 HSSP:P50480 EMBL:U73946 EMBL:FO080336
PIR:T33049 RefSeq:NP_491668.1 UniGene:Cel.18382
ProteinModelPortal:G5EC36 SMR:G5EC36 IntAct:G5EC36
EnsemblMetazoa:C04F1.3 GeneID:172236 KEGG:cel:CELE_C04F1.3
CTD:172236 WormBase:C04F1.3 OMA:DEWDEER NextBio:874619
Uniprot:G5EC36
Length = 452
Score = 148 (57.2 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+A RVRT E QL++L+ + ++S PD ER+ ++TGLS RV +VWFQN R + KK
Sbjct: 264 QATRVRTVLNENQLKILRDCYSINSRPDATLKERLVEMTGLSARVIRVWFQNKRCKDKK 322
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E QL++L+ + ++S PD ER+ ++TGLS RV +VWFQN R + KK
Sbjct: 267 RVRTVLNENQLKILRDCYSINSRPDATLKERLVEMTGLSARVIRVWFQNKRCKDKK 322
Score = 135 (52.6 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKAR-DHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R F +CS+C +D V +A +V+HL CFAC AC+++L TGEEF + + + C+S
Sbjct: 112 RLFTTRCSRCHGDFDKTDLVMRAGPQNVFHLNCFACVACEKRLQTGEEFQIKNNSLYCRS 171
Score = 64 (27.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 14/60 (23%), Positives = 24/60 (40%)
Query: 617 AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
A C+ C I+ ++R + +H C C C R L + + + C+ Y L
Sbjct: 54 AVCAGCRLEISDRYFLRVNPNLEFHAQCLKCVQCSRPLDENQTAFVKNGQTYCRDDYRRL 113
Score = 52 (23.4 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 274 LGINDPVETAQHA--FAVTSEKCKVLV-DSLLKQEQLNLQEHNQCVK 317
L ++ PVE QH AV + C++ + D + NL+ H QC+K
Sbjct: 38 LCLDSPVEQRQHQPPMAVCAG-CRLEISDRYFLRVNPNLEFHAQCLK 83
Score = 42 (19.8 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 377 VQFRDALALRYNHGLKGLPTYCDGCGGEMSVTHALNCKKGGLVKHGHDYLRDE 429
++ D LR N L+ C C + + L+ + VK+G Y RD+
Sbjct: 61 LEISDRYFLRVNPNLE-FHAQCLKC---VQCSRPLDENQTAFVKNGQTYCRDD 109
>UNIPROTKB|E2QZZ9 [details] [associations]
symbol:LHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
EMBL:AAEX03006759 EMBL:AAEX03006760 EMBL:AAEX03006761
Ensembl:ENSCAFT00000031319 Uniprot:E2QZZ9
Length = 397
Score = 239 (89.2 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 55/135 (40%), Positives = 75/135 (55%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQV 745
+++ TGL RV QV
Sbjct: 194 QLSSETGLDMRVVQV 208
>UNIPROTKB|L7N0D8 [details] [associations]
symbol:LHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] GeneTree:ENSGT00700000104177
EMBL:AAEX03006759 Ensembl:ENSCAFT00000020228 Uniprot:L7N0D8
Length = 403
Score = 239 (89.2 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 55/135 (40%), Positives = 75/135 (55%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHED-RVLCK 670
F+ FG KC+ C GI + VR+A+D VYHL CFAC CKRQL+TG+EF L ED R++CK
Sbjct: 88 FKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCK 147
Query: 671 SHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLE 730
+ Y ++ AKR RTT T +QL+ L++ + P E
Sbjct: 148 ADY--------------ETAKQREAEATAKRPRTTITAKQLETLKSAYNTSPKPARHVRE 193
Query: 731 RIAQITGLSKRVTQV 745
+++ TGL RV QV
Sbjct: 194 QLSSETGLDMRVVQV 208
>UNIPROTKB|E1BUB0 [details] [associations]
symbol:Gga.17712 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 IPI:IPI00679968 EMBL:AADN02024688
EMBL:AADN02024689 EMBL:AADN02024690 Ensembl:ENSGALT00000030871
ArrayExpress:E1BUB0 Uniprot:E1BUB0
Length = 3532
Score = 171 (65.3 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2518 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2574
Score = 166 (63.5 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2519 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2574
Score = 136 (52.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 50/149 (33%), Positives = 75/149 (50%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2835 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2894
Query: 121 TGK-MKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNG 179
GK +Q P G PE S +K + S+ H Q +T+ R G
Sbjct: 2895 IGKPFMINQTGPD-GTKPEC--SLCGVK--YSARLSIRDHIFSKQHITKVRETVG--SQL 2947
Query: 180 DEKKNY-----VKEKV-NQWIDCVKKLSE 202
D +K+Y V++ + Q +D +KK ++
Sbjct: 2948 DREKDYLAPTTVRQLMAQQELDRIKKATD 2976
Score = 132 (51.5 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2834 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2893
Query: 759 HTGK 762
+ GK
Sbjct: 2894 NIGK 2897
Score = 118 (46.6 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2142 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2201
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2202 ETKDNEKR 2209
Score = 116 (45.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2135 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2194
Query: 756 K 756
K
Sbjct: 2195 K 2195
Score = 114 (45.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2043 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2098
Score = 83 (34.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2510 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2542
Score = 67 (28.6 bits), Expect = 3.3e-17, Sum P(3) = 3.3e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2039 SQFKRPRTRITDDQLKILRAYFDINNSP 2066
Score = 56 (24.8 bits), Expect = 4.4e-16, Sum P(3) = 4.4e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2132 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2163
>UNIPROTKB|D4A3E6 [details] [associations]
symbol:Zfhx4 "Protein Zfhx4" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 RGD:1563022 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.160.60 IPI:IPI00360964 Ensembl:ENSRNOT00000067194
ArrayExpress:D4A3E6 Uniprot:D4A3E6
Length = 3564
Score = 171 (65.3 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2553 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2609
Score = 166 (63.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2554 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2609
Score = 132 (51.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2876 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2935
Query: 759 HTGK 762
+ GK
Sbjct: 2936 NIGK 2939
Score = 131 (51.2 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2877 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2936
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2937 IGKPFMINQSGTDGTKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 2990
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
+K+Y V++ + Q +D +KK S+
Sbjct: 2991 REKDYLAPTTVRQLMAQQELDRIKKASD 3018
Score = 118 (46.6 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2180 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2239
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2240 EAKDNEKR 2247
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2173 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2232
Query: 756 K 756
K
Sbjct: 2233 K 2233
Score = 114 (45.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2081 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2136
Score = 83 (34.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2545 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2577
Score = 67 (28.6 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2077 SQFKRPRTRITDDQLKILRAYFDINNSP 2104
Score = 56 (24.8 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2170 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2201
>UNIPROTKB|J3QQ66 [details] [associations]
symbol:ZFHX4 "Zinc finger homeobox protein 4" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
EMBL:AC011716 EMBL:AC023200 EMBL:AC087110 HGNC:HGNC:30939
ProteinModelPortal:J3QQ66 Ensembl:ENST00000050961 Uniprot:J3QQ66
Length = 3567
Score = 171 (65.3 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2561 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2617
Score = 166 (63.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2562 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2617
Score = 132 (51.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2885 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2944
Query: 759 HTGK 762
+ GK
Sbjct: 2945 NIGK 2948
Score = 131 (51.2 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2886 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2945
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2946 IGKPFMINQGGTEGTKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 2999
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
+K+Y V++ + Q +D +KK S+
Sbjct: 3000 REKDYLAPTTVRQLMAQQELDRIKKASD 3027
Score = 118 (46.6 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2185 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2244
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2245 ETKDNEKR 2252
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2178 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2237
Query: 756 K 756
K
Sbjct: 2238 K 2238
Score = 114 (45.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2086 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2141
Score = 83 (34.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2553 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2585
Score = 67 (28.6 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2082 SQFKRPRTRITDDQLKILRAYFDINNSP 2109
Score = 56 (24.8 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2175 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2206
>UNIPROTKB|Q86UP3 [details] [associations]
symbol:ZFHX4 "Zinc finger homeobox protein 4" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.160.60 HSSP:P02836 eggNOG:NOG301069
KO:K09380 HOGENOM:HOG000155777 HOVERGEN:HBG050606 OrthoDB:EOG4Z0B4P
EMBL:AB083343 EMBL:AY260762 EMBL:AK131408 EMBL:AC011716
EMBL:AC023200 EMBL:AC087110 IPI:IPI00827871 IPI:IPI00941659
IPI:IPI00973446 IPI:IPI00978044 RefSeq:NP_078997.4
UniGene:Hs.458973 ProteinModelPortal:Q86UP3 SMR:Q86UP3
STRING:Q86UP3 PhosphoSite:Q86UP3 DMDM:74762449 PaxDb:Q86UP3
PRIDE:Q86UP3 Ensembl:ENST00000455469 GeneID:79776 KEGG:hsa:79776
UCSC:uc003yat.1 UCSC:uc003yaw.1 CTD:79776 GeneCards:GC08P077593
HGNC:HGNC:30939 HPA:HPA023837 MIM:606940 neXtProt:NX_Q86UP3
PharmGKB:PA134986366 GenomeRNAi:79776 NextBio:69263
ArrayExpress:Q86UP3 Bgee:Q86UP3 CleanEx:HS_ZFHX4
Genevestigator:Q86UP3 Uniprot:Q86UP3
Length = 3567
Score = 171 (65.3 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2561 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2617
Score = 166 (63.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2562 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2617
Score = 132 (51.5 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2885 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2944
Query: 759 HTGK 762
+ GK
Sbjct: 2945 NIGK 2948
Score = 131 (51.2 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2886 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2945
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2946 IGKPFMINQGGTEGTKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 2999
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
+K+Y V++ + Q +D +KK S+
Sbjct: 3000 REKDYLAPTTVRQLMAQQELDRIKKASD 3027
Score = 118 (46.6 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2185 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2244
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2245 ETKDNEKR 2252
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2178 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2237
Query: 756 K 756
K
Sbjct: 2238 K 2238
Score = 114 (45.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2086 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2141
Score = 83 (34.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2553 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2585
Score = 67 (28.6 bits), Expect = 3.4e-17, Sum P(3) = 3.4e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2082 SQFKRPRTRITDDQLKILRAYFDINNSP 2109
Score = 56 (24.8 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2175 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2206
>UNIPROTKB|O73590 [details] [associations]
symbol:ZFHX4 "Zinc finger homeobox protein 4" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.160.60 eggNOG:NOG301069
HOGENOM:HOG000155777 HOVERGEN:HBG050606 OrthoDB:EOG4Z0B4P
EMBL:U26150 IPI:IPI00679968 UniGene:Gga.54907 UniGene:Gga.55112
UniGene:Gga.56109 ProteinModelPortal:O73590 SMR:O73590
NextBio:20815969 Uniprot:O73590
Length = 3573
Score = 171 (65.3 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2549 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2605
Score = 166 (63.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2550 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2605
Score = 136 (52.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 50/149 (33%), Positives = 75/149 (50%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2876 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2935
Query: 121 TGK-MKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNG 179
GK +Q P G PE S +K + S+ H Q +T+ R G
Sbjct: 2936 IGKPFMINQTGPD-GTKPEC--SLCGVK--YSARLSIRDHIFSKQHITKVRETVG--SQL 2988
Query: 180 DEKKNY-----VKEKV-NQWIDCVKKLSE 202
D +K+Y V++ + Q +D +KK ++
Sbjct: 2989 DREKDYLAPTTVRQLMAQQELDRIKKATD 3017
Score = 132 (51.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2875 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2934
Query: 759 HTGK 762
+ GK
Sbjct: 2935 NIGK 2938
Score = 118 (46.6 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2173 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2232
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2233 ETKDNEKR 2240
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2166 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2225
Query: 756 K 756
K
Sbjct: 2226 K 2226
Score = 114 (45.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2074 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2129
Score = 83 (34.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2541 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2573
Score = 67 (28.6 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2070 SQFKRPRTRITDDQLKILRAYFDINNSP 2097
Score = 56 (24.8 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2163 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2194
>UNIPROTKB|F1ND08 [details] [associations]
symbol:Gga.17712 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 OMA:IMMQPVQ EMBL:AADN02024688
EMBL:AADN02024689 EMBL:AADN02024690 IPI:IPI00811326
Ensembl:ENSGALT00000025275 ArrayExpress:F1ND08 Uniprot:F1ND08
Length = 3578
Score = 171 (65.3 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2554 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2610
Score = 166 (63.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2555 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2610
Score = 136 (52.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 50/149 (33%), Positives = 75/149 (50%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2881 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2940
Query: 121 TGK-MKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNG 179
GK +Q P G PE S +K + S+ H Q +T+ R G
Sbjct: 2941 IGKPFMINQTGPD-GTKPEC--SLCGVK--YSARLSIRDHIFSKQHITKVRETVG--SQL 2993
Query: 180 DEKKNY-----VKEKV-NQWIDCVKKLSE 202
D +K+Y V++ + Q +D +KK ++
Sbjct: 2994 DREKDYLAPTTVRQLMAQQELDRIKKATD 3022
Score = 132 (51.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2880 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2939
Query: 759 HTGK 762
+ GK
Sbjct: 2940 NIGK 2943
Score = 118 (46.6 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2178 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2237
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2238 ETKDNEKR 2245
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2171 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2230
Query: 756 K 756
K
Sbjct: 2231 K 2231
Score = 114 (45.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2079 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2134
Score = 83 (34.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2546 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2578
Score = 67 (28.6 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2075 SQFKRPRTRITDDQLKILRAYFDINNSP 2102
Score = 56 (24.8 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2168 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2199
>UNIPROTKB|F1MPW8 [details] [associations]
symbol:F1MPW8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 OMA:IMMQPVQ EMBL:DAAA02038914
EMBL:DAAA02038915 IPI:IPI00727901 UniGene:Bt.105445
Ensembl:ENSBTAT00000061595 NextBio:20878201 Uniprot:F1MPW8
Length = 3586
Score = 171 (65.3 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2573 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2629
Score = 166 (63.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2574 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2629
Score = 132 (51.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2897 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2956
Query: 759 HTGK 762
+ GK
Sbjct: 2957 NIGK 2960
Score = 132 (51.5 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2898 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2957
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2958 IGKPFMINQSGTEGAKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 3011
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
+K+Y V++ + Q +D +KK S+
Sbjct: 3012 REKDYLAPTTVRQLMAQQELDRIKKASD 3039
Score = 116 (45.9 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2198 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQT 2257
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2258 ETKDNEKR 2265
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2191 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2250
Query: 756 K 756
K
Sbjct: 2251 K 2251
Score = 114 (45.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2099 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2154
Score = 83 (34.3 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2565 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2597
Score = 67 (28.6 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2095 SQFKRPRTRITDDQLKILRAYFDINNSP 2122
Score = 56 (24.8 bits), Expect = 4.7e-16, Sum P(3) = 4.7e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2188 SDTSFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2219
Score = 44 (20.5 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 9/33 (27%), Positives = 21/33 (63%)
Query: 309 LQEHNQCVKNAINTELVRKETEYQEKQERILSS 341
LQ++ Q +N + L +++ + QE+Q++ L +
Sbjct: 3285 LQQYQQYQQN-LQESLQKQQKQQQEQQQKALQA 3316
>UNIPROTKB|E7EVZ1 [details] [associations]
symbol:ZFHX4 "Zinc finger homeobox protein 4" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
EMBL:AC011716 EMBL:AC023200 EMBL:AC087110 IPI:IPI00978044
HGNC:HGNC:30939 ProteinModelPortal:E7EVZ1 SMR:E7EVZ1
Ensembl:ENST00000518282 ArrayExpress:E7EVZ1 Bgee:E7EVZ1
Uniprot:E7EVZ1
Length = 3590
Score = 171 (65.3 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2580 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2636
Score = 166 (63.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2581 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2636
Score = 132 (51.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2904 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2963
Query: 759 HTGK 762
+ GK
Sbjct: 2964 NIGK 2967
Score = 131 (51.2 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2905 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2964
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2965 IGKPFMINQGGTEGTKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 3018
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
+K+Y V++ + Q +D +KK S+
Sbjct: 3019 REKDYLAPTTVRQLMAQQELDRIKKASD 3046
Score = 118 (46.6 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2204 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2263
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2264 ETKDNEKR 2271
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2197 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2256
Query: 756 K 756
K
Sbjct: 2257 K 2257
Score = 114 (45.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2105 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2160
Score = 83 (34.3 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2572 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2604
Score = 67 (28.6 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2101 SQFKRPRTRITDDQLKILRAYFDINNSP 2128
Score = 56 (24.8 bits), Expect = 4.7e-16, Sum P(3) = 4.7e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2194 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2225
>RGD|1563022 [details] [associations]
symbol:Zfhx4 "zinc finger homeobox 4" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 RGD:1563022 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.160.60 GeneTree:ENSGT00530000063717 KO:K09380
OrthoDB:EOG4Z0B4P CTD:79776 OMA:IMMQPVQ IPI:IPI00768052
RefSeq:NP_001178631.1 UniGene:Rn.133363 Ensembl:ENSRNOT00000011641
GeneID:310250 KEGG:rno:310250 UCSC:RGD:1563022 NextBio:661754
ArrayExpress:D4A3U5 Uniprot:D4A3U5
Length = 3593
Score = 171 (65.3 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2582 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2638
Score = 166 (63.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2583 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2638
Score = 132 (51.5 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2905 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2964
Query: 759 HTGK 762
+ GK
Sbjct: 2965 NIGK 2968
Score = 131 (51.2 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2906 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2965
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2966 IGKPFMINQSGTDGTKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 3019
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
+K+Y V++ + Q +D +KK S+
Sbjct: 3020 REKDYLAPTTVRQLMAQQELDRIKKASD 3047
Score = 118 (46.6 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2209 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2268
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2269 EAKDNEKR 2276
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2202 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2261
Query: 756 K 756
K
Sbjct: 2262 K 2262
Score = 114 (45.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2110 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2165
Score = 83 (34.3 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2574 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2606
Score = 67 (28.6 bits), Expect = 3.5e-17, Sum P(3) = 3.5e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2106 SQFKRPRTRITDDQLKILRAYFDINNSP 2133
Score = 56 (24.8 bits), Expect = 4.7e-16, Sum P(3) = 4.7e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2199 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2230
>UNIPROTKB|G3V138 [details] [associations]
symbol:ZFHX4 "Zinc finger homeodomain 4, isoform CRA_c"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.160.60 EMBL:CH471068 KO:K09380 EMBL:AC011716
EMBL:AC023200 EMBL:AC087110 RefSeq:NP_078997.4 UniGene:Hs.458973
GeneID:79776 KEGG:hsa:79776 CTD:79776 HGNC:HGNC:30939
GenomeRNAi:79776 NextBio:69263 ProteinModelPortal:G3V138 SMR:G3V138
PRIDE:G3V138 Ensembl:ENST00000521891 OMA:IMMQPVQ
ArrayExpress:G3V138 Bgee:G3V138 Uniprot:G3V138
Length = 3616
Score = 171 (65.3 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2606 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2662
Score = 166 (63.5 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2607 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2662
Score = 132 (51.5 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2930 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2989
Query: 759 HTGK 762
+ GK
Sbjct: 2990 NIGK 2993
Score = 131 (51.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2931 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2990
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2991 IGKPFMINQGGTEGTKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 3044
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
+K+Y V++ + Q +D +KK S+
Sbjct: 3045 REKDYLAPTTVRQLMAQQELDRIKKASD 3072
Score = 118 (46.6 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2230 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2289
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2290 ETKDNEKR 2297
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2223 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2282
Query: 756 K 756
K
Sbjct: 2283 K 2283
Score = 114 (45.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2131 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2186
Score = 83 (34.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2598 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2630
Score = 67 (28.6 bits), Expect = 3.6e-17, Sum P(3) = 3.6e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2127 SQFKRPRTRITDDQLKILRAYFDINNSP 2154
Score = 56 (24.8 bits), Expect = 4.8e-16, Sum P(3) = 4.8e-16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2220 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2251
>MGI|MGI:2137668 [details] [associations]
symbol:Zfhx4 "zinc finger homeodomain 4" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028 PROSITE:PS50071
PROSITE:PS50157 SMART:SM00355 SMART:SM00389 SMART:SM00451
MGI:MGI:2137668 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.160.60 eggNOG:NOG301069
HOGENOM:HOG000155777 HOVERGEN:HBG050606 OrthoDB:EOG4Z0B4P
EMBL:AB024499 IPI:IPI00122043 UniGene:Mm.41522 PDB:2YRK PDBsum:2YRK
ProteinModelPortal:Q9JJN2 SMR:Q9JJN2 PhosphoSite:Q9JJN2
PRIDE:Q9JJN2 UCSC:uc008ooa.1 EvolutionaryTrace:Q9JJN2
CleanEx:MM_ZFHX4 Genevestigator:Q9JJN2 Uniprot:Q9JJN2
Length = 3550
Score = 171 (65.3 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2543 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2599
Score = 166 (63.5 bits), Expect = 6.9e-17, Sum P(3) = 6.9e-17
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2544 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2599
Score = 129 (50.5 bits), Expect = 6.9e-17, Sum P(3) = 6.9e-17
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA+++K +
Sbjct: 2866 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKERKFKI 2925
Query: 759 HTGK 762
+ GK
Sbjct: 2926 NIGK 2929
Score = 128 (50.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 46/148 (31%), Positives = 71/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA+++K ++
Sbjct: 2867 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKERKFKIN 2926
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2927 IGKPFMINQSGTDGTKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 2980
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
+K+Y V++ + Q +D +KK S+
Sbjct: 2981 REKDYLAPTTVRQLMAQQELDRIKKASD 3008
Score = 118 (46.6 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2170 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2229
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2230 EAKDNEKR 2237
Score = 115 (45.5 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2071 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVVKHWFRNTLFKERQ 2126
Score = 115 (45.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K
Sbjct: 2170 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARK 2223
Score = 83 (34.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2535 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2567
Score = 67 (28.6 bits), Expect = 6.9e-17, Sum P(3) = 6.9e-17
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2067 SQFKRPRTRITDDQLKILRAYFDINNSP 2094
Score = 54 (24.1 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 8 HSKSKA---KRV-RTTFTEEQLQVLQANFQLDSNP 38
H KS A KR RT FT+ QL+VLQ F ++ P
Sbjct: 2157 HYKSDAAFSKRSSRTRFTDYQLRVLQDFFDTNAYP 2191
>FB|FBgn0004607 [details] [associations]
symbol:zfh2 "Zn finger homeodomain 2" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0003677 "DNA binding" evidence=NAS;TAS]
[GO:0007399 "nervous system development" evidence=IEP] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=NAS] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028 PROSITE:PS50071
PROSITE:PS50157 SMART:SM00355 SMART:SM00389 GO:GO:0005634
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60 GO:GO:0007476
EMBL:AE014135 GO:GO:0000977 EMBL:M63450 EMBL:AY312816 EMBL:AY312817
EMBL:AY312818 EMBL:AY312819 EMBL:AY312820 EMBL:AY312821
EMBL:AY312822 EMBL:AY312823 EMBL:AY312824 EMBL:AY312825
EMBL:AY312826 EMBL:AY312827 EMBL:AY312828 EMBL:AY312829
EMBL:AY312830 EMBL:AY312831 EMBL:AY312832 EMBL:AY312833
EMBL:AY312834 EMBL:AY312835 EMBL:AY312836 EMBL:AY312837
EMBL:AY312838 EMBL:AY312839 EMBL:AY060681 PIR:S33642
RefSeq:NP_524623.2 ProteinModelPortal:P28167 SMR:P28167
IntAct:P28167 MINT:MINT-904703 STRING:P28167 PaxDb:P28167
EnsemblMetazoa:FBtr0089070 GeneID:43795 KEGG:dme:Dmel_CG1449
CTD:43795 FlyBase:FBgn0004607 eggNOG:NOG301069
GeneTree:ENSGT00530000063717 InParanoid:P28167 KO:K09380
OrthoDB:EOG447D82 PhylomeDB:P28167 GenomeRNAi:43795 NextBio:835886
Bgee:P28167 GermOnline:CG1449 Uniprot:P28167
Length = 3005
Score = 153 (58.9 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 44/136 (32%), Positives = 60/136 (44%)
Query: 622 CCRGIASSDWVRKARDHVYH-LACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVXXX 680
C R D K + H H L F +A + + + ++D C+ EL
Sbjct: 2689 CTRSKQKDD---KEKSHYLHNLEDFL-DATMIE-NNSQTLTFNDDEKACQKD--ELTQNS 2741
Query: 681 XXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSK 740
+ KR+RTT EQL L +Q +SNP + LE I++ L K
Sbjct: 2742 NAIEKRSSVSPVNVSSKQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKK 2801
Query: 741 RVTQVWFQNSRARQKK 756
RV QVWFQNSRA+ KK
Sbjct: 2802 RVVQVWFQNSRAKDKK 2817
Score = 144 (55.7 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 30/56 (53%), Positives = 37/56 (66%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT EQL L +Q +SNP + LE I++ L KRV QVWFQNSRA+ KK
Sbjct: 2762 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2817
Score = 131 (51.2 bits), Expect = 7.5e-07, Sum P(4) = 7.5e-07
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S KR RT FT+ Q++VLQ F+ +S P DLE ++++ LS RV VWFQN+R +Q+
Sbjct: 2151 SGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQR 2210
Query: 756 K 756
K
Sbjct: 2211 K 2211
Score = 128 (50.1 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RT FT+ Q++VLQ F+ +S P DLE ++++ LS RV VWFQN+R +Q+K
Sbjct: 2158 RTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRK 2211
Score = 102 (41.0 bits), Expect = 1.7e-09, Sum P(4) = 1.7e-09
Identities = 16/56 (28%), Positives = 38/56 (67%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A+F ++++P + + ++Q L +V + WF+N+ ++++
Sbjct: 1799 RARTRITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMKVVKHWFRNTLFKERQ 1854
Score = 79 (32.9 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 2 ADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
A++ S S KR RT T++QL++L+A+F ++++P
Sbjct: 1786 ANANSQQLASNQKRARTRITDDQLKILRAHFDINNSP 1822
Score = 69 (29.3 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 4 SESSHSKSKAKRV-RTTFTEEQLQVLQANFQLDSNP 38
S SS S S KR RT FT+ Q++VLQ F+ +S P
Sbjct: 2144 SSSSSSTSGGKRANRTRFTDYQIKVLQEFFENNSYP 2179
Score = 41 (19.5 bits), Expect = 3.5e-16, Sum P(4) = 3.5e-16
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 290 TSEKCKVLVDSLLKQEQLNLQEHNQC 315
TS++ K L++Q+Q L++ N+C
Sbjct: 2481 TSQEVKQ--QFLMQQQQKKLEQGNEC 2504
Score = 41 (19.5 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 9/47 (19%), Positives = 24/47 (51%)
Query: 497 KRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHL--EFHSFLKRIA 541
++H ++ H + T + + TP++ + + HL E H+ + ++
Sbjct: 1557 QKHMEQAHAEDGTPSTRTNSPQTPMLSTEETHKHLLAESHAVEREVS 1603
Score = 40 (19.1 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 65 TTFTEEQLQVLQANFQLDSNPDGQDLERI 93
T F ++QLQ Q++ PD DL +
Sbjct: 412 TEFLQQQLQQHQSSLFPSPCPDHPDLNGV 440
Score = 39 (18.8 bits), Expect = 0.00046, Sum P(3) = 0.00045
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 75 LQANFQLDSNPDGQDLERI 93
L+ANFQL S D + L+++
Sbjct: 951 LKANFQLHSKTD-KHLQKL 968
Score = 38 (18.4 bits), Expect = 4.5e-12, Sum P(4) = 4.5e-12
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 28 LQANFQLDSNPD 39
L+ANFQL S D
Sbjct: 951 LKANFQLHSKTD 962
Score = 37 (18.1 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 442 VKEPIMRDSSSTSPALIADFKINGVW 467
V P+ R S+ S I+D+ N ++
Sbjct: 1944 VSTPLSRPESTNSSGNISDYIGNNIF 1969
>ZFIN|ZDB-GENE-050309-237 [details] [associations]
symbol:si:ch73-386h18.1 "si:ch73-386h18.1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 ZFIN:ZDB-GENE-050309-237 GO:GO:0005634 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.160.60 GeneTree:ENSGT00530000063717 EMBL:CU607082
IPI:IPI00619238 Ensembl:ENSDART00000113668 ArrayExpress:F1Q7K3
Bgee:F1Q7K3 Uniprot:F1Q7K3
Length = 2962
Score = 168 (64.2 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL+VL + LDSNP + L+ I+ GL KRV QVWFQN+RAR++K
Sbjct: 2281 KRMRTTITPEQLEVLYQKYLLDSNPTRKMLDHISNEVGLKKRVVQVWFQNTRARERK 2337
Score = 163 (62.4 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL+VL + LDSNP + L+ I+ GL KRV QVWFQN+RAR++K
Sbjct: 2282 RMRTTITPEQLEVLYQKYLLDSNPTRKMLDHISNEVGLKKRVVQVWFQNTRARERK 2337
Score = 132 (51.5 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 46/166 (27%), Positives = 73/166 (43%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLH 120
R RT + Q++VL+A F P + E + GL+KRV QVWFQN+RA++KK L
Sbjct: 2567 RYRTQMSNLQVKVLKACFSDYKTPTMLECEALGNDIGLAKRVVQVWFQNARAKEKKAKLS 2626
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTE-KRFLGGVIGNG 179
K +++ P + ++ S+ H Q + + K LGG +
Sbjct: 2627 LAKQFGTESTS----IDRPKTECTLCSVKYSSSLSIRDHVFSQQHLAKVKEALGGQMERD 2682
Query: 180 DEKKNYVKEK---VNQWIDCVKKLSEA-AKKSPQAAFSVVTKSLQC 221
E V + Q ++ +KK S+ PQA + +L C
Sbjct: 2683 REYLGSVSTRQLMAQQELEQLKKTSDVLGHVQPQAILGLNQTALHC 2728
Score = 122 (48.0 bits), Expect = 8.6e-16, Sum P(3) = 8.6e-16
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT + Q++VL+A F P + E + GL+KRV QVWFQN+RA++KK
Sbjct: 2566 KRYRTQMSNLQVKVLKACFSDYKTPTMLECEALGNDIGLAKRVVQVWFQNARAKEKK 2622
Score = 119 (46.9 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-- 121
RT F + QL+VLQ F ++ P + E+++ + LS RV VWFQN+R + +K+
Sbjct: 1899 RTRFNDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLSTRVIVVWFQNARQKARKNYENQG 1958
Query: 122 --GKMKSSQNRPKYGYYPEPNKSF 143
GK ++ Y+ N +F
Sbjct: 1959 EGGKESERRDLSNDRYFRTSNNNF 1982
Score = 114 (45.2 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
RT F + QL+VLQ F ++ P + E+++ + LS RV VWFQN+R + +K+
Sbjct: 1899 RTRFNDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLSTRVIVVWFQNARQKARKN 1953
Score = 98 (39.6 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 17/56 (30%), Positives = 37/56 (66%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P+ + +A +GL +V + WF+N+ ++++
Sbjct: 1800 RPRTRITDDQLRVLRQYFDINNSPNEDQIHEMANKSGLPHKVIKHWFRNTLFKERQ 1855
Score = 80 (33.2 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT T EQL+VL + LDSNP
Sbjct: 2281 KRMRTTITPEQLEVLYQKYLLDSNP 2305
Score = 64 (27.6 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 11/30 (36%), Positives = 23/30 (76%)
Query: 10 KSKAKRVRTTFTEEQLQVLQANFQLDSNPD 39
+ ++KR RT T++QL+VL+ F ++++P+
Sbjct: 1795 QQQSKRPRTRITDDQLRVLRQYFDINNSPN 1824
Score = 45 (20.9 bits), Expect = 7.5e-14, Sum P(3) = 7.5e-14
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP 38
RT F + QL+VLQ F ++ P
Sbjct: 1899 RTRFNDYQLRVLQDFFDANAYP 1920
Score = 44 (20.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 281 ETAQHAFAVTSEKCKVLVDSLLKQEQLNLQEHNQ 314
+T+ + + +K ++DS L Q Q +LQ+ Q
Sbjct: 1377 DTSHPSTSDVRKKLVTMIDSALAQAQAHLQQELQ 1410
Score = 42 (19.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLAC--FACEACKRQLSTGEEFALH 663
+C C G + R AR Y F C+ C+ +T ++H
Sbjct: 442 QCPYCSSGQSHP---RLARGETYSCGYKPFRCQVCQYSTTTKGNLSIH 486
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 641 HLACFACEACKRQLSTGEEFALH 663
H+ + C C T E+ LH
Sbjct: 1091 HIYKYRCNQCSLAFKTPEKLQLH 1113
Score = 38 (18.4 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 634 KARDHVYHLACFACEACKRQLSTGEEFALHEDRV 667
K DH + C++C++ S H++++
Sbjct: 1620 KEVDHSEDVEKLECKSCRKLFSNALILKSHKEQI 1653
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 647 CEACKRQLSTGEEFALH 663
C AC + S+ E+ LH
Sbjct: 726 CNACDYKASSLEKLKLH 742
>FB|FBgn0052105 [details] [associations]
symbol:CG32105 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
eggNOG:NOG243427 HSSP:P50480 EMBL:BT003467 RefSeq:NP_729801.1
UniGene:Dm.15353 SMR:Q9VTW5 IntAct:Q9VTW5 MINT:MINT-307196
EnsemblMetazoa:FBtr0075953 GeneID:39406 KEGG:dme:Dmel_CG32105
UCSC:CG32105-RB FlyBase:FBgn0052105 InParanoid:Q9VTW5 OMA:CCHAILP
OrthoDB:EOG4BCC40 GenomeRNAi:39406 NextBio:813485 Uniprot:Q9VTW5
Length = 640
Score = 233 (87.1 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 56/154 (36%), Positives = 74/154 (48%)
Query: 613 RSFGAKCSKCCRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS 671
R FG KCS CC I + V R + V+HL CF C AC+ L GE+F L + ++ C
Sbjct: 328 RLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYR 387
Query: 672 HYLE----LVXXXXXXXXXXXXXXXXXXKSK-----AKRVRTTFTEEQLQVLQANFQLDS 722
H LE L + + KR RT T +Q + +A+F
Sbjct: 388 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSP 447
Query: 723 NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
P + E +A+ TGLS RV QVWFQN RA+ KK
Sbjct: 448 KPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK 481
>UNIPROTKB|E2R4S1 [details] [associations]
symbol:ZFHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 OMA:IMMQPVQ EMBL:AAEX03015884
EMBL:AAEX03015882 EMBL:AAEX03015883 Ensembl:ENSCAFT00000013195
Uniprot:E2R4S1
Length = 3623
Score = 171 (65.3 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 33/57 (57%), Positives = 43/57 (75%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2614 KRLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2670
Score = 166 (63.5 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2615 RLRTTITPEQLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2670
Score = 132 (51.5 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2938 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2997
Query: 759 HTGK 762
+ GK
Sbjct: 2998 NIGK 3001
Score = 132 (51.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2939 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2998
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2999 IGKPFMINQSGAEGTKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 3052
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
+K+Y V++ + Q +D +KK S+
Sbjct: 3053 REKDYLAPTTVRQLMAQQELDRIKKASD 3080
Score = 118 (46.6 bits), Expect = 4.8e-15, Sum P(3) = 4.8e-15
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2238 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2297
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2298 ETKDNEKR 2305
Score = 116 (45.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2231 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2290
Query: 756 K 756
K
Sbjct: 2291 K 2291
Score = 102 (41.0 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 18/56 (32%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+ L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2140 RPRTRITDDQLK-LRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2194
Score = 83 (34.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR+RTT T EQL++L + LDSNP
Sbjct: 2606 SGEDQHRDKRLRTTITPEQLEILYEKYLLDSNP 2638
Score = 55 (24.4 bits), Expect = 6.1e-16, Sum P(3) = 6.1e-16
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL+ L+A F ++++P
Sbjct: 2136 SQFKRPRTRITDDQLK-LRAYFDINNSP 2162
Score = 53 (23.7 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
+++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2228 ADASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2259
>UNIPROTKB|F1RWK5 [details] [associations]
symbol:ZFHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 OMA:IMMQPVQ EMBL:CU179688
EMBL:CU462958 Ensembl:ENSSSCT00000006763 Uniprot:F1RWK5
Length = 3566
Score = 154 (59.3 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RTT T ++L++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2556 KR-RTTITPDKLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2611
Score = 153 (58.9 bits), Expect = 8.3e-16, Sum P(3) = 8.3e-16
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RTT T ++L++L + LDSNP + L+ IA+ GL KRV QVWFQN+RAR++K
Sbjct: 2558 RTTITPDKLEILYEKYLLDSNPTRKMLDHIAREVGLKKRVVQVWFQNTRARERK 2611
Score = 133 (51.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 50/165 (30%), Positives = 77/165 (46%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-LH 120
R RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK ++
Sbjct: 2880 RFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKIN 2939
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
GK G PE + + L +F H+ V E +G + D
Sbjct: 2940 IGKPFMINQSGTEGTKPECTLCGVKYSAR-LSIRDHIFSKQHISKVRET--VGSQL---D 2993
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSEAAKKSPQAAFSVVTKSL 219
+K+Y V++ + Q +D +KK S+ + Q + + SL
Sbjct: 2994 REKDYLAPTTVRQLMAQQELDRIKKASDVLGLAVQQPSMMDSSSL 3038
Score = 132 (51.5 bits), Expect = 8.3e-16, Sum P(3) = 8.3e-16
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH-L 758
KR RT + QL+VL+A F P Q+ E + GL KRV QVWFQN+RA++KK +
Sbjct: 2879 KRFRTQMSNLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKI 2938
Query: 759 HTGK 762
+ GK
Sbjct: 2939 NIGK 2942
Score = 118 (46.6 bits), Expect = 1.7e-14, Sum P(3) = 1.7e-14
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK-HLHTG 122
RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +K + +
Sbjct: 2182 RTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKARKSYENQA 2241
Query: 123 KMKSSQNR 130
+ K ++ R
Sbjct: 2242 EAKDNEKR 2249
Score = 116 (45.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +KR RT FT+ QL+VLQ F ++ P ++E+++ + L RV VWFQN+R + +
Sbjct: 2175 SFSKRSSRTRFTDYQLRVLQDFFDTNAYPKDDEIEQLSTVLNLPTRVIVVWFQNARQKAR 2234
Query: 756 K 756
K
Sbjct: 2235 K 2235
Score = 114 (45.2 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 18/56 (32%), Positives = 42/56 (75%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL++L+A F ++++P + ++ +A+ +GLS++V + WF+N+ ++++
Sbjct: 2083 RPRTRITDDQLKILRAYFDINNSPSEEQIQEMAEKSGLSQKVIKHWFRNTLFKERQ 2138
Score = 67 (28.6 bits), Expect = 8.3e-16, Sum P(3) = 8.3e-16
Identities = 12/28 (42%), Positives = 22/28 (78%)
Query: 11 SKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S+ KR RT T++QL++L+A F ++++P
Sbjct: 2079 SQFKRPRTRITDDQLKILRAYFDINNSP 2106
Score = 66 (28.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 6 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S + + KR RTT T ++L++L + LDSNP
Sbjct: 2548 SGEDQHRDKR-RTTITPDKLEILYEKYLLDSNP 2579
Score = 56 (24.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 4 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
S++S SK + RT FT+ QL+VLQ F ++ P
Sbjct: 2172 SDASFSKRSS---RTRFTDYQLRVLQDFFDTNAYP 2203
>RGD|1560268 [details] [associations]
symbol:Zfhx3 "zinc finger homeobox 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0007050 "cell cycle
arrest" evidence=IEP] [GO:0007420 "brain development" evidence=IEP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISO] [GO:0045663 "positive regulation of
myoblast differentiation" evidence=ISO] [GO:0045664 "regulation of
neuron differentiation" evidence=IEP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 RGD:1560268 GO:GO:0005525 GO:GO:0005634
GO:GO:0005737 GO:GO:0045664 GO:GO:0007420 GO:GO:0043565
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 GO:GO:0003700
GO:GO:0007050 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 IPI:IPI00951506
Ensembl:ENSRNOT00000068594 ArrayExpress:F1M547 Uniprot:F1M547
Length = 2537
Score = 170 (64.9 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 1466 KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 1522
Score = 165 (63.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 1467 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 1522
Score = 121 (47.7 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK
Sbjct: 1770 KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK 1826
Score = 121 (47.7 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK +
Sbjct: 1771 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 1830
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQF-LEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
N+ Y P+ + IK L +F H+ V K +G + D
Sbjct: 1831 MAKHFGINQTSYEG-PKTECTLCGIKYSARLSVRDHIFSQQHISKV--KDTIGSQL---D 1884
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
++K Y V++ + Q +D +KK +E
Sbjct: 1885 KEKEYFDPATVRQLMAQQELDRIKKANE 1912
Score = 120 (47.3 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 122
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 1069 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 1128
Query: 123 KMKSSQNR 130
+ K + R
Sbjct: 1129 EGKDGERR 1136
Score = 115 (45.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 761
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 1069 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 1128
Query: 762 KMKSSQ 767
+ K +
Sbjct: 1129 EGKDGE 1134
Score = 102 (41.0 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 17/56 (30%), Positives = 39/56 (69%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P + ++ +A +GL ++V + WF+N+ ++++
Sbjct: 970 RPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ 1025
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT T EQL++L + LDSNP
Sbjct: 1466 KRLRTTITPEQLEILYQKYLLDSNP 1490
Score = 60 (26.2 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR RT T++QL+VL+ F ++++P
Sbjct: 969 KRPRTRITDDQLRVLRQYFDINNSP 993
Score = 51 (23.0 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 640 YHLACFACEA--CKRQ-LSTGEEFALHEDRVLCKS 671
YH C ACE+ C + LS E ALH+ R + ++
Sbjct: 2363 YH--CLACESALCGEEALSQHLESALHKHRTITRA 2395
Score = 50 (22.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP 38
RT FT+ QL+VLQ F ++ P
Sbjct: 1069 RTRFTDYQLRVLQDFFDANAYP 1090
Score = 42 (19.8 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 481 NADAPSYSSQTWNTIAKRHAQEK 503
+A +PS + T NT+ KR +EK
Sbjct: 1422 SATSPSTPTSTMNTL-KRKLEEK 1443
Score = 42 (19.8 bits), Expect = 2.7e-08, Sum P(4) = 2.7e-08
Identities = 12/58 (20%), Positives = 30/58 (51%)
Query: 302 LKQEQLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSS 359
++Q+Q Q+ Q + + + +++ + Q++Q++ P A Q T + +G +S
Sbjct: 2193 IQQQQQQQQQQQQQQQRQLQQQQQQQQQQQQQQQQQ--QQQPKASQ---TPVPQGPAS 2245
Score = 39 (18.8 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 638 HVYHLACFACEACKRQLSTGEEFALH 663
HVY + C C T E+ LH
Sbjct: 222 HVYK---YRCNQCSLAFKTIEKLQLH 244
Score = 37 (18.1 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 141 KSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
++F +K + LE + L + +Q + GG++ NGD
Sbjct: 264 RTFQALK-KHLETSHLELSEADIQ-----QLYGGLLANGD 297
>UNIPROTKB|F1M4Q6 [details] [associations]
symbol:Zfhx3 "Protein Zfhx3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0045663 "positive regulation of
myoblast differentiation" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 RGD:1560268 GO:GO:0005525 GO:GO:0005739 GO:GO:0043565
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0044212 Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 IPI:IPI00359640
Ensembl:ENSRNOT00000019408 ArrayExpress:F1M4Q6 Uniprot:F1M4Q6
Length = 2542
Score = 170 (64.9 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 1466 KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 1522
Score = 165 (63.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 1467 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 1522
Score = 121 (47.7 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK
Sbjct: 1770 KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK 1826
Score = 121 (47.7 bits), Expect = 9.7e-06, Sum P(4) = 9.7e-06
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK +
Sbjct: 1771 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 1830
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQF-LEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
N+ Y P+ + IK L +F H+ V K +G + D
Sbjct: 1831 MAKHFGINQTSYEG-PKTECTLCGIKYSARLSVRDHIFSQQHISKV--KDTIGSQL---D 1884
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
++K Y V++ + Q +D +KK +E
Sbjct: 1885 KEKEYFDPATVRQLMAQQELDRIKKANE 1912
Score = 120 (47.3 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 122
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 1069 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 1128
Query: 123 KMKSSQNR 130
+ K + R
Sbjct: 1129 EGKDGERR 1136
Score = 115 (45.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 761
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 1069 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 1128
Query: 762 KMKSSQ 767
+ K +
Sbjct: 1129 EGKDGE 1134
Score = 102 (41.0 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 17/56 (30%), Positives = 39/56 (69%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P + ++ +A +GL ++V + WF+N+ ++++
Sbjct: 970 RPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ 1025
Score = 79 (32.9 bits), Expect = 9.7e-06, Sum P(4) = 9.7e-06
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT T EQL++L + LDSNP
Sbjct: 1466 KRLRTTITPEQLEILYQKYLLDSNP 1490
Score = 60 (26.2 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR RT T++QL+VL+ F ++++P
Sbjct: 969 KRPRTRITDDQLRVLRQYFDINNSP 993
Score = 51 (23.0 bits), Expect = 2.2e-08, Sum P(4) = 2.2e-08
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 640 YHLACFACEA--CKRQ-LSTGEEFALHEDRVLCKS 671
YH C ACE+ C + LS E ALH+ R + ++
Sbjct: 2368 YH--CLACESALCGEEALSQHLESALHKHRTITRA 2400
Score = 50 (22.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP 38
RT FT+ QL+VLQ F ++ P
Sbjct: 1069 RTRFTDYQLRVLQDFFDANAYP 1090
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(4) = 2.2e-08
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 303 KQEQLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQSS 359
+Q+Q Q+ Q + + V+++ + Q++Q++ P A Q T + +G +S
Sbjct: 2199 QQQQQQQQQQRQLQQQQQQQQKVQQQQQQQQQQQQ--QQQPKASQ---TPVPQGPAS 2250
Score = 42 (19.8 bits), Expect = 1.2e-15, Sum P(4) = 1.2e-15
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 481 NADAPSYSSQTWNTIAKRHAQEK 503
+A +PS + T NT+ KR +EK
Sbjct: 1422 SATSPSTPTSTMNTL-KRKLEEK 1443
Score = 39 (18.8 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 638 HVYHLACFACEACKRQLSTGEEFALH 663
HVY + C C T E+ LH
Sbjct: 222 HVYK---YRCNQCSLAFKTIEKLQLH 244
Score = 37 (18.1 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 141 KSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
++F +K + LE + L + +Q + GG++ NGD
Sbjct: 264 RTFQALK-KHLETSHLELSEADIQ-----QLYGGLLANGD 297
>UNIPROTKB|F1S397 [details] [associations]
symbol:ZFHX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005525 GO:GO:0005739 GO:GO:0043565
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0044212 Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 OMA:SMDAMEI EMBL:CU442712
EMBL:CU694824 Ensembl:ENSSSCT00000003049 Uniprot:F1S397
Length = 2637
Score = 170 (64.9 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 1577 KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 1633
Score = 165 (63.1 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 1578 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 1633
Score = 121 (47.7 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK
Sbjct: 1882 KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK 1938
Score = 121 (47.7 bits), Expect = 9.0e-06, Sum P(4) = 9.0e-06
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK +
Sbjct: 1883 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 1942
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQF-LEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
N+ Y P+ + IK L +F H+ V K +G + D
Sbjct: 1943 MAKHFGINQTSYEG-PKTECTLCGIKYSARLSVRDHIFSQQHISKV--KDTIGSQL---D 1996
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
++K Y V++ + Q +D +KK +E
Sbjct: 1997 KEKEYFDPATVRQLMAQQELDRIKKANE 2024
Score = 120 (47.3 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 122
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 1182 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 1241
Query: 123 KMKSSQNR 130
+ K + R
Sbjct: 1242 EGKDGERR 1249
Score = 115 (45.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 761
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 1182 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 1241
Query: 762 KMKSSQ 767
+ K +
Sbjct: 1242 EGKDGE 1247
Score = 102 (41.0 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 17/56 (30%), Positives = 39/56 (69%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P + ++ +A +GL ++V + WF+N+ ++++
Sbjct: 1083 RPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ 1138
Score = 79 (32.9 bits), Expect = 9.0e-06, Sum P(4) = 9.0e-06
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT T EQL++L + LDSNP
Sbjct: 1577 KRLRTTITPEQLEILYQKYLLDSNP 1601
Score = 60 (26.2 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR RT T++QL+VL+ F ++++P
Sbjct: 1082 KRPRTRITDDQLRVLRQYFDINNSP 1106
Score = 51 (23.0 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 640 YHLACFACEA--CKRQ-LSTGEEFALHEDRVLCKS 671
YH C ACE+ C + LS E ALH+ R + ++
Sbjct: 2459 YH--CLACESALCGEEALSQHLESALHKHRTITRA 2491
Score = 50 (22.7 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP 38
RT FT+ QL+VLQ F ++ P
Sbjct: 1182 RTRFTDYQLRVLQDFFDANAYP 1203
Score = 44 (20.5 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 300 SLLKQEQLNLQEHNQCVKNAINTELVRK-ETEYQEKQERILSSLPPAKQRVLTRIVEGQS 358
SLL+Q Q++ Q ++ AI + R+ + + Q++Q+++ P + T + G +
Sbjct: 2289 SLLQQ----YQQYQQSLQEAIQQQQQRQLQQQQQQQQQKVQQQQQPKASQ--TPVPPGAA 2342
Query: 359 S 359
S
Sbjct: 2343 S 2343
Score = 42 (19.8 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 481 NADAPSYSSQTWNTIAKRHAQEK 503
+A +PS + T NT+ KR +EK
Sbjct: 1535 SATSPSTPTSTMNTL-KRKLEEK 1556
Score = 40 (19.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 638 HVYHLACFACEACKRQLSTGEEFALH 663
HVY + C C T E+ LH
Sbjct: 326 HVYK---YRCNQCSLAFKTVEKLQLH 348
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 28/142 (19%), Positives = 59/142 (41%)
Query: 301 LLKQEQLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQRVLTRIVEGQ-SS 359
+L+Q+Q Q+ +Q + ++ L++ ++K + ++ QR G+ +S
Sbjct: 780 ILQQQQQQQQQQSQLSLSQSHSALLQPSQHTEKKNKSVIKEKEKEIQRERDSAEGGEGNS 839
Query: 360 HWLNVIP---KSSDNFDLSPVQFRDALAL--RYNHGLKGLPTYC--DGCGGEMSVTHALN 412
+P K+ + +L+P + L R +G T + G E+ + + N
Sbjct: 840 GPKESLPDALKAKEKKELAPGGSSEPSMLPPRIASDARGNATKALLENFGFELVIQYNEN 899
Query: 413 C----KKGGLVKHGHDYLRDEC 430
KK G + G + + EC
Sbjct: 900 KQKVQKKNGKTEQGENLEKLEC 921
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 141 KSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
++F +K + LE + L + +Q + GG++ NGD
Sbjct: 368 RTFQALK-KHLETSHLELSEADIQ-----QLYGGLLANGD 401
>UNIPROTKB|E9PSL4 [details] [associations]
symbol:Zfhx2 "Protein Zfhx2" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR027028
PANTHER:PTHR24208:SF42 IPI:IPI00409966 Ensembl:ENSRNOT00000034133
RGD:735143 ArrayExpress:E9PSL4 Uniprot:E9PSL4
Length = 1106
Score = 155 (59.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K KR+RTT EQL++L + DSNP + L+ I++ GL KRV QVWFQN+RAR++K
Sbjct: 393 KDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERK 451
Score = 147 (56.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT EQL++L + DSNP + L+ I++ GL KRV QVWFQN+RAR++K
Sbjct: 396 RLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERK 451
Score = 132 (51.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTG 122
RT FTE Q Q LQ+ F+ + P ++ER+A + GL+ RV VWFQN+R + +K+ G
Sbjct: 139 RTKFTEFQTQALQSFFETSAYPKDGEVERLASLLGLASRVVVVWFQNARQKARKNACEG 197
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTG 761
RT FTE Q Q LQ+ F+ + P ++ER+A + GL+ RV VWFQN+R + +K+ G
Sbjct: 139 RTKFTEFQTQALQSFFETSAYPKDGEVERLASLLGLASRVVVVWFQNARQKARKNACEG 197
Score = 124 (48.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+R RT + QL++++A ++ P Q+ E + + GL KRV QVWFQN+RA++KK
Sbjct: 604 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKK 660
Score = 122 (48.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT + QL++++A ++ P Q+ E + + GL KRV QVWFQN+RA++KK
Sbjct: 605 RYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKK 660
Score = 68 (29.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 12 KAKRVRTTFTEEQLQVLQANFQLDSNP 38
K KR+RTT EQL++L + DSNP
Sbjct: 393 KDKRLRTTILPEQLEILYRWYMQDSNP 419
Score = 54 (24.1 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP-DG 40
RT FTE Q Q LQ+ F+ + P DG
Sbjct: 139 RTKFTEFQTQALQSFFETSAYPKDG 163
>FB|FBgn0003896 [details] [associations]
symbol:tup "tailup" species:7227 "Drosophila melanogaster"
[GO:0008293 "torso signaling pathway" evidence=IGI] [GO:0007362
"terminal region determination" evidence=IGI] [GO:0007390
"germ-band shortening" evidence=IMP] [GO:0008258 "head involution"
evidence=NAS] [GO:0046665 "amnioserosa maintenance" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IMP] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IPI] [GO:0007391 "dorsal
closure" evidence=IMP] [GO:0008407 "chaeta morphogenesis"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0070983 "dendrite
guidance" evidence=IMP] [GO:0035310 "notum cell fate specification"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007507 "heart
development" evidence=IMP] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IDA] [GO:0048542
"lymph gland development" evidence=IMP] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0022416 "chaeta development"
evidence=IMP] [GO:0007521 "muscle cell fate determination"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007507 GO:GO:0046872
GO:GO:0007391 GO:GO:0008293 GO:GO:0008270 GO:GO:0045944
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000980
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0043433 GO:GO:0048542
GO:GO:0035310 GO:GO:0008407 eggNOG:NOG264882 GO:GO:0007362
GO:GO:0070983 GO:GO:0008258 GO:GO:0007390 GO:GO:0007521 HSSP:P50480
GO:GO:0046665 EMBL:U89385 ProteinModelPortal:P92031 SMR:P92031
STRING:P92031 PRIDE:P92031 FlyBase:FBgn0003896 InParanoid:P92031
OrthoDB:EOG45DV52 ArrayExpress:P92031 Bgee:P92031 Uniprot:P92031
Length = 534
Score = 154 (59.3 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVL-CKS 671
R FG KC KC + +D+V +A+ ++H+ CF C AC RQL G+EFAL + L CK
Sbjct: 110 RLFGTKCDKCGNSFSKNDFVMRAKTKIFHIECFRCSACARQLLPGDEFALRDAGALYCKE 169
Query: 672 HY 673
+
Sbjct: 170 DH 171
Score = 132 (51.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK T
Sbjct: 243 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDKKK--T 300
Query: 122 GKMKSSQNRPKYG 134
+MK + K G
Sbjct: 301 IQMKLQMHEEKEG 313
Score = 128 (50.1 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 240 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDKK 298
Score = 73 (30.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 618 KCSKC--CRGIASSDWV-RKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
+ S C C G ++ R A D +H AC C+ C++ L + + + CK Y+
Sbjct: 50 RLSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYV 109
Query: 675 EL 676
L
Sbjct: 110 RL 111
Score = 39 (18.8 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 5/10 (50%), Positives = 9/10 (90%)
Query: 396 TYCDGCGGEM 405
++C GCGG++
Sbjct: 52 SHCVGCGGQI 61
>UNIPROTKB|F1N9R6 [details] [associations]
symbol:ZFHX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0045663 "positive regulation of
myoblast differentiation" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005525 GO:GO:0005739 GO:GO:0043565
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0044212 Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 OMA:SMDAMEI EMBL:AADN02054193
EMBL:AADN02054194 IPI:IPI00604352 Ensembl:ENSGALT00000001009
Uniprot:F1N9R6
Length = 3662
Score = 170 (64.9 bits), Expect = 5.2e-15, Sum P(4) = 5.2e-15
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2637 KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2693
Score = 165 (63.1 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2638 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2693
Score = 123 (48.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK +
Sbjct: 2943 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3002
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQF-LEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
N+ Y P+ + IK L +F H+ V E +G + D
Sbjct: 3003 MAKHFGINQTSYEG-PKTECTLCGIKYSARLSVRDHIFSQQHISKVKET--IGSQL---D 3056
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
++K Y V++ + Q +D +KK +E
Sbjct: 3057 KEKEYFDPATVRQLMAQQELDRIKKANE 3084
Score = 121 (47.7 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK
Sbjct: 2942 KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK 2998
Score = 120 (47.3 bits), Expect = 5.2e-15, Sum P(4) = 5.2e-15
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 122
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2241 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2300
Query: 123 KMKSSQNR 130
+ K + R
Sbjct: 2301 EGKDGERR 2308
Score = 115 (45.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 761
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2241 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2300
Query: 762 KMKSSQ 767
+ K +
Sbjct: 2301 EGKDGE 2306
Score = 102 (41.0 bits), Expect = 5.7e-12, Sum P(3) = 5.7e-12
Identities = 17/56 (30%), Positives = 39/56 (69%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P + ++ +A +GL ++V + WF+N+ ++++
Sbjct: 2142 RPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ 2197
Score = 79 (32.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT T EQL++L + LDSNP
Sbjct: 2637 KRLRTTITPEQLEILYQKYLLDSNP 2661
Score = 60 (26.2 bits), Expect = 3.3e-15, Sum P(3) = 3.3e-15
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR RT T++QL+VL+ F ++++P
Sbjct: 2141 KRPRTRITDDQLRVLRQYFDINNSP 2165
Score = 50 (22.7 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP 38
RT FT+ QL+VLQ F ++ P
Sbjct: 2241 RTRFTDYQLRVLQDFFDANAYP 2262
Score = 44 (20.5 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 109 QN-SRARQKKHLHTGKMKSSQNRPKYGYYPEPNKSFLVIK 147
QN S+ + +HL G + S Y YY N + +K
Sbjct: 835 QNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLK 874
Score = 42 (19.8 bits), Expect = 5.2e-15, Sum P(4) = 5.2e-15
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 481 NADAPSYSSQTWNTIAKRHAQEK 503
+A +PS + T NT+ KR +EK
Sbjct: 2595 SATSPSTPTSTMNTL-KRKLEEK 2616
Score = 42 (19.8 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 14/50 (28%), Positives = 17/50 (34%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLAC--FACEACKRQLSTGEEFALH 663
G C C G R AR Y F CE C +T ++H
Sbjct: 695 GGSCVYCKSG---QPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIH 741
Score = 39 (18.8 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 638 HVYHLACFACEACKRQLSTGEEFALH 663
HVY + C C T E+ LH
Sbjct: 1395 HVYK---YRCNQCSLAFKTIEKLQLH 1417
>UNIPROTKB|E1BPV9 [details] [associations]
symbol:LOC510844 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028 PROSITE:PS50071
PROSITE:PS50157 SMART:SM00355 SMART:SM00389 SMART:SM00451
GO:GO:0005739 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0044212 Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 KO:K09378 OMA:SMDAMEI
EMBL:DAAA02046727 EMBL:DAAA02046728 EMBL:DAAA02046729
EMBL:DAAA02046730 EMBL:DAAA02046731 EMBL:DAAA02046732
IPI:IPI00699406 RefSeq:XP_003583442.1 RefSeq:XP_003587277.1
Ensembl:ENSBTAT00000019489 GeneID:510844 KEGG:bta:510844
Uniprot:E1BPV9
Length = 3695
Score = 170 (64.9 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2643 KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2699
Score = 165 (63.1 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2644 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2699
Score = 121 (47.7 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK
Sbjct: 2948 KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK 3004
Score = 121 (47.7 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK +
Sbjct: 2949 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3008
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQF-LEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
N+ Y P+ + IK L +F H+ V K +G + D
Sbjct: 3009 MAKHFGINQTSYEG-PKTECTLCGIKYSARLSVRDHIFSQQHISKV--KDTIGSQL---D 3062
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
++K Y V++ + Q +D +KK +E
Sbjct: 3063 KEKEYFDPATVRQLMAQQELDRIKKANE 3090
Score = 120 (47.3 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 122
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2247 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2306
Query: 123 KMKSSQNR 130
+ K + R
Sbjct: 2307 EGKDGERR 2314
Score = 115 (45.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 761
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2247 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2306
Query: 762 KMKSSQ 767
+ K +
Sbjct: 2307 EGKDGE 2312
Score = 102 (41.0 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 17/56 (30%), Positives = 39/56 (69%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P + ++ +A +GL ++V + WF+N+ ++++
Sbjct: 2148 RPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ 2203
Score = 79 (32.9 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT T EQL++L + LDSNP
Sbjct: 2643 KRLRTTITPEQLEILYQKYLLDSNP 2667
Score = 60 (26.2 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR RT T++QL+VL+ F ++++P
Sbjct: 2147 KRPRTRITDDQLRVLRQYFDINNSP 2171
Score = 51 (23.0 bits), Expect = 6.2e-08, Sum P(4) = 6.2e-08
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 640 YHLACFACEA--CKRQ-LSTGEEFALHEDRVLCKS 671
YH C ACE+ C + LS E ALH+ R + ++
Sbjct: 3519 YH--CLACESALCGEEALSQHLESALHKHRTITRA 3551
Score = 50 (22.7 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP 38
RT FT+ QL+VLQ F ++ P
Sbjct: 2247 RTRFTDYQLRVLQDFFDANAYP 2268
Score = 45 (20.9 bits), Expect = 6.2e-08, Sum P(4) = 6.2e-08
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 300 SLLKQEQLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQ 347
SLL+Q Q++ Q ++ A+ + ++ + Q++Q+++ P A Q
Sbjct: 3357 SLLQQ----YQQYQQSLQEALQQQ---QQRQLQQQQQKVQQQQPKASQ 3397
Score = 42 (19.8 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 481 NADAPSYSSQTWNTIAKRHAQEK 503
+A +PS + T NT+ KR +EK
Sbjct: 2601 SATSPSTPTSTMNTL-KRKLEEK 2622
Score = 42 (19.8 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 14/50 (28%), Positives = 17/50 (34%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLAC--FACEACKRQLSTGEEFALH 663
G C C G R AR Y F CE C +T ++H
Sbjct: 707 GGSCVYCKSG---QPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIH 753
Score = 40 (19.1 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 638 HVYHLACFACEACKRQLSTGEEFALH 663
HVY + C C T E+ LH
Sbjct: 1406 HVYK---YRCNQCSLAFKTVEKLQLH 1428
Score = 39 (18.8 bits), Expect = 2.4e-07, Sum P(4) = 2.4e-07
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 114 RQKKHLHTGKMKSSQNRPKYGYYPEP 139
+Q++ L + K Q +PK P P
Sbjct: 3376 QQQRQLQQQQQKVQQQQPKASQTPVP 3401
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 109 QN-SRARQKKHLHTGKMKSSQNRPKYGYYPEPN 140
QN ++ + +HL G + S Y YY N
Sbjct: 846 QNMTQMQHSRHLGLGGLPSPAEAELYQYYLAQN 878
Score = 37 (18.1 bits), Expect = 0.00040, Sum P(5) = 0.00040
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 141 KSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
++F +K + LE + L + +Q + GG++ NGD
Sbjct: 1448 RTFQALK-KHLETSHLELSEADIQ-----QLYGGLLANGD 1481
Score = 37 (18.1 bits), Expect = 0.00040, Sum P(5) = 0.00040
Identities = 17/81 (20%), Positives = 37/81 (45%)
Query: 297 LVDSLLKQEQLNLQEHNQCVKNAINTEL--------VRKETEYQEKQERILSSLPPAKQR 348
L++ L Q Q+ Q H Q ++ ++L + + +++ EK+ +++ K++
Sbjct: 1832 LLEDLKAQVQIPQQGHQQMLQQQQQSQLPLPQSHPALLQPSQHAEKKNKLVIK---EKEK 1888
Query: 349 VLTRIVEGQSSHWLNVIPKSS 369
R +G +N PK S
Sbjct: 1889 ESQRERDGAEGGEINSGPKES 1909
>UNIPROTKB|Q15911 [details] [associations]
symbol:ZFHX3 "Zinc finger homeobox protein 3" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IDA] [GO:0045663
"positive regulation of myoblast differentiation" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005525 GO:GO:0005739 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003924
GO:GO:0006184 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0044212 Gene3D:3.30.160.60
GO:GO:0007517 EMBL:CH471166 GO:GO:0045662 GO:GO:0045663
eggNOG:NOG301069 EMBL:L32832 EMBL:D10250 EMBL:AC004943
EMBL:AC132068 EMBL:AC002044 IPI:IPI00014186 IPI:IPI00219003
PIR:A41948 RefSeq:NP_001158238.1 RefSeq:NP_008816.3
UniGene:Hs.598297 PDB:2DA1 PDB:2DA2 PDB:2DA3 PDBsum:2DA1
PDBsum:2DA2 PDBsum:2DA3 ProteinModelPortal:Q15911 SMR:Q15911
IntAct:Q15911 MINT:MINT-1462085 STRING:Q15911 PhosphoSite:Q15911
DMDM:108935822 PaxDb:Q15911 PeptideAtlas:Q15911 PRIDE:Q15911
Ensembl:ENST00000268489 Ensembl:ENST00000397992 GeneID:463
KEGG:hsa:463 UCSC:uc002fck.3 CTD:463 GeneCards:GC16M072816
H-InvDB:HIX0038876 HGNC:HGNC:777 MIM:104155 neXtProt:NX_Q15911
PharmGKB:PA162409676 HOGENOM:HOG000155777 HOVERGEN:HBG050606
InParanoid:Q15911 KO:K09378 OMA:SMDAMEI OrthoDB:EOG4Z0B4P
PhylomeDB:Q15911 ChiTaRS:ZFHX3 EvolutionaryTrace:Q15911
GenomeRNAi:463 NextBio:1915 ArrayExpress:Q15911 Bgee:Q15911
CleanEx:HS_ZFHX3 Genevestigator:Q15911 GermOnline:ENSG00000140836
Uniprot:Q15911
Length = 3703
Score = 170 (64.9 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2642 KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2698
Score = 165 (63.1 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2643 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2698
Score = 121 (47.7 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK
Sbjct: 2947 KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK 3003
Score = 121 (47.7 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK +
Sbjct: 2948 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3007
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQF-LEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
N+ Y P+ + IK L +F H+ V K +G + D
Sbjct: 3008 MAKHFGINQTSYEG-PKTECTLCGIKYSARLSVRDHIFSQQHISKV--KDTIGSQL---D 3061
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
++K Y V++ + Q +D +KK +E
Sbjct: 3062 KEKEYFDPATVRQLMAQQELDRIKKANE 3089
Score = 120 (47.3 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 122
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2246 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2305
Query: 123 KMKSSQNR 130
+ K + R
Sbjct: 2306 EGKDGERR 2313
Score = 115 (45.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 761
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2246 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2305
Query: 762 KMKSSQ 767
+ K +
Sbjct: 2306 EGKDGE 2311
Score = 102 (41.0 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 17/56 (30%), Positives = 39/56 (69%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P + ++ +A +GL ++V + WF+N+ ++++
Sbjct: 2147 RPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ 2202
Score = 79 (32.9 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT T EQL++L + LDSNP
Sbjct: 2642 KRLRTTITPEQLEILYQKYLLDSNP 2666
Score = 60 (26.2 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR RT T++QL+VL+ F ++++P
Sbjct: 2146 KRPRTRITDDQLRVLRQYFDINNSP 2170
Score = 51 (23.0 bits), Expect = 7.8e-08, Sum P(4) = 7.8e-08
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 640 YHLACFACEA--CKRQ-LSTGEEFALHEDRVLCKS 671
YH C ACE+ C + LS E ALH+ R + ++
Sbjct: 3529 YH--CLACESALCGEEALSQHLESALHKHRTITRA 3561
Score = 50 (22.7 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP 38
RT FT+ QL+VLQ F ++ P
Sbjct: 2246 RTRFTDYQLRVLQDFFDANAYP 2267
Score = 50 (22.7 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 486 SYSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHLEFHSFLKRI 540
S S W + Q K +YNT L+A+F L C TD H++ + + I
Sbjct: 970 SLSEDEWKAVMGDSYQCKLCRYNT---QLKANFQ-LHCKTDK--HVQKYQLVAHI 1018
Score = 44 (20.5 bits), Expect = 7.8e-08, Sum P(4) = 7.8e-08
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 300 SLLKQEQLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQ 347
SLL+Q Q++ Q ++ AI + R+ Q++Q+++ P A Q
Sbjct: 3359 SLLQQ----YQQYQQSLQEAIQQQQQRQLQ--QQQQQKVQQQQPKASQ 3400
Score = 42 (19.8 bits), Expect = 5.4e-15, Sum P(4) = 5.4e-15
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 481 NADAPSYSSQTWNTIAKRHAQEK 503
+A +PS + T NT+ KR +EK
Sbjct: 2600 SATSPSTPTSTMNTL-KRKLEEK 2621
Score = 42 (19.8 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 14/50 (28%), Positives = 17/50 (34%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLAC--FACEACKRQLSTGEEFALH 663
G C C G R AR Y F CE C +T ++H
Sbjct: 698 GGSCVYCKSG---QPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIH 744
Score = 41 (19.5 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 109 QN-SRARQKKHLHTGKMKSSQNRPKYGYYPEPNKSFLVIK 147
QN ++ + +HL G + S Y YY N + +K
Sbjct: 837 QNMTQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLK 876
Score = 39 (18.8 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 638 HVYHLACFACEACKRQLSTGEEFALH 663
HVY + C C T E+ LH
Sbjct: 1397 HVYK---YRCNQCSLAFKTIEKLQLH 1419
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 141 KSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
++F +K + LE + L + +Q + GG++ NGD
Sbjct: 1439 RTFQALK-KHLETSHLELSEADIQ-----QLYGGLLANGD 1472
>UNIPROTKB|E2RBC5 [details] [associations]
symbol:ZFHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045663 "positive regulation of myoblast
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028 PROSITE:PS50071
PROSITE:PS50157 SMART:SM00355 SMART:SM00389 SMART:SM00451
GO:GO:0005525 GO:GO:0005739 GO:GO:0043565 GO:GO:0008270
GO:GO:0003924 GO:GO:0006184 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
Gene3D:3.30.160.60 GO:GO:0045662 GO:GO:0045663
GeneTree:ENSGT00530000063717 OMA:SMDAMEI EMBL:AAEX03004091
Ensembl:ENSCAFT00000032240 Uniprot:E2RBC5
Length = 3719
Score = 170 (64.9 bits), Expect = 5.5e-15, Sum P(4) = 5.5e-15
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2659 KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2715
Score = 165 (63.1 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2660 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2715
Score = 121 (47.7 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK
Sbjct: 2964 KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK 3020
Score = 121 (47.7 bits), Expect = 3.4e-05, Sum P(4) = 3.4e-05
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK +
Sbjct: 2965 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3024
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQF-LEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
N+ Y P+ + IK L +F H+ V K +G + D
Sbjct: 3025 MAKHFGINQTSYEG-PKTECTLCGIKYSARLSVRDHIFSQQHISKV--KDTIGSQL---D 3078
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
++K Y V++ + Q +D +KK +E
Sbjct: 3079 KEKEYFDPATVRQLMAQQELDRIKKANE 3106
Score = 120 (47.3 bits), Expect = 5.5e-15, Sum P(4) = 5.5e-15
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 122
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2264 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2323
Query: 123 KMKSSQNR 130
+ K + R
Sbjct: 2324 EGKDGERR 2331
Score = 115 (45.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 761
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2264 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2323
Query: 762 KMKSSQ 767
+ K +
Sbjct: 2324 EGKDGE 2329
Score = 102 (41.0 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 17/56 (30%), Positives = 39/56 (69%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P + ++ +A +GL ++V + WF+N+ ++++
Sbjct: 2165 RPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ 2220
Score = 79 (32.9 bits), Expect = 3.4e-05, Sum P(4) = 3.4e-05
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT T EQL++L + LDSNP
Sbjct: 2659 KRLRTTITPEQLEILYQKYLLDSNP 2683
Score = 60 (26.2 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR RT T++QL+VL+ F ++++P
Sbjct: 2164 KRPRTRITDDQLRVLRQYFDINNSP 2188
Score = 51 (23.0 bits), Expect = 8.0e-08, Sum P(4) = 8.0e-08
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 640 YHLACFACEA--CKRQ-LSTGEEFALHEDRVLCKS 671
YH C ACE+ C + LS E ALH+ R + ++
Sbjct: 3543 YH--CLACESALCGEEALSQHLESALHKHRTITRA 3575
Score = 50 (22.7 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP 38
RT FT+ QL+VLQ F ++ P
Sbjct: 2264 RTRFTDYQLRVLQDFFDANAYP 2285
Score = 44 (20.5 bits), Expect = 8.0e-08, Sum P(4) = 8.0e-08
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 300 SLLKQEQLNLQEHNQCVKNAINTELVRKETEYQEKQERILSSLPPAKQ 347
SLL+Q Q++ Q ++ AI + R + + Q++Q+++ P A Q
Sbjct: 3375 SLLQQ----YQQYQQSLQEAIQQQQQR-QLQQQQQQQKVQQQ-PKASQ 3416
Score = 42 (19.8 bits), Expect = 5.5e-15, Sum P(4) = 5.5e-15
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 481 NADAPSYSSQTWNTIAKRHAQEK 503
+A +PS + T NT+ KR +EK
Sbjct: 2617 SATSPSTPTSTMNTL-KRKLEEK 2638
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 14/50 (28%), Positives = 17/50 (34%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLAC--FACEACKRQLSTGEEFALH 663
G C C G R AR Y F CE C +T ++H
Sbjct: 696 GGSCVYCKSG---QPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIH 742
Score = 41 (19.5 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 109 QN-SRARQKKHLHTGKMKSSQNRPKYGYYPEPNKSFLVIK 147
QN ++ + +HL G + S Y YY N + +K
Sbjct: 836 QNMTQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLK 875
Score = 39 (18.8 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 638 HVYHLACFACEACKRQLSTGEEFALH 663
HVY + C C T E+ LH
Sbjct: 1405 HVYK---YRCNQCSLAFKTIEKLQLH 1427
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 131 PKYGYYPEPNKSFLVIKPQFLEEASLLFH 159
P++ + E N + L KP +E+++ H
Sbjct: 19 PQHQQWTEVNSTHLPDKPSSMEQSTSETH 47
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 141 KSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
++F +K + LE + L + +Q + GG++ NGD
Sbjct: 1447 RTFQALK-KHLETSHLELSEADIQ-----QLYGGLLANGD 1480
>MGI|MGI:99948 [details] [associations]
symbol:Zfhx3 "zinc finger homeobox 3" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISO] [GO:0045663 "positive regulation of
myoblast differentiation" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00096
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 MGI:MGI:99948 GO:GO:0005525 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003924 GO:GO:0006184 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60 GO:GO:0007517
eggNOG:NOG301069 HOGENOM:HOG000155777 HOVERGEN:HBG050606
OrthoDB:EOG4Z0B4P ChiTaRS:ZFHX3 EMBL:D26046 IPI:IPI00119958
UniGene:Mm.416972 UniGene:Mm.477670 ProteinModelPortal:Q61329
SMR:Q61329 IntAct:Q61329 STRING:Q61329 PhosphoSite:Q61329
PRIDE:Q61329 UCSC:uc009nid.1 InParanoid:Q61329 CleanEx:MM_ZFHX3
Genevestigator:Q61329 GermOnline:ENSMUSG00000038872 Uniprot:Q61329
Length = 3726
Score = 170 (64.9 bits), Expect = 5.5e-15, Sum P(4) = 5.5e-15
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2651 KRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2707
Score = 165 (63.1 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT T EQL++L + LDSNP + L+ IA GL KRV QVWFQN+RAR++K
Sbjct: 2652 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2707
Score = 121 (47.7 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK
Sbjct: 2955 KRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKK 3011
Score = 121 (47.7 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT T QL+VL++ F P + E + GL KRV QVWFQN+RA++KK +
Sbjct: 2956 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3015
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQF-LEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
N+ Y P+ + IK L +F H+ V K +G + D
Sbjct: 3016 MAKHFGINQTSYEG-PKTECTLCGIKYSARLSVRDHIFSQQHISKV--KDTIGSQL---D 3069
Query: 181 EKKNY-----VKEKV-NQWIDCVKKLSE 202
++K Y V++ + Q +D +KK +E
Sbjct: 3070 KEKEYFDPATVRQLMAQQELDRIKKANE 3097
Score = 120 (47.3 bits), Expect = 5.5e-15, Sum P(4) = 5.5e-15
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 122
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2253 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2312
Query: 123 KMKSSQNR 130
+ K + R
Sbjct: 2313 EGKDGERR 2320
Score = 115 (45.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT-G 761
RT FT+ QL+VLQ F ++ P + E+++ + L RV VWFQN+R + +K+ G
Sbjct: 2253 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQG 2312
Query: 762 KMKSSQ 767
+ K +
Sbjct: 2313 EGKDGE 2318
Score = 102 (41.0 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 17/56 (30%), Positives = 39/56 (69%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P + ++ +A +GL ++V + WF+N+ ++++
Sbjct: 2154 RPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQ 2209
Score = 79 (32.9 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT T EQL++L + LDSNP
Sbjct: 2651 KRLRTTITPEQLEILYQKYLLDSNP 2675
Score = 60 (26.2 bits), Expect = 3.5e-15, Sum P(3) = 3.5e-15
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR RT T++QL+VL+ F ++++P
Sbjct: 2153 KRPRTRITDDQLRVLRQYFDINNSP 2177
Score = 51 (23.0 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 640 YHLACFACEA--CKRQ-LSTGEEFALHEDRVLCKS 671
YH C ACE+ C + LS E ALH+ R + ++
Sbjct: 3552 YH--CLACESALCGEEALSQHLESALHKHRTITRA 3584
Score = 50 (22.7 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP 38
RT FT+ QL+VLQ F ++ P
Sbjct: 2253 RTRFTDYQLRVLQDFFDANAYP 2274
Score = 50 (22.7 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 486 SYSSQTWNTIAKRHAQEKHLKYNTAAEDLRASFTPLVCSTDGALHLEFHSFLKRI 540
S S W + Q K +YNT L+A+F L C TD H++ + + I
Sbjct: 971 SLSEDEWKAVMGDSYQCKLCRYNT---QLKANFQ-LHCKTDK--HVQKYQLVAHI 1019
Score = 46 (21.3 bits), Expect = 7.5e-07, Sum P(4) = 7.5e-07
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACF 645
C KC G + AR H+ L CF
Sbjct: 3494 CRKCQAGFGDEE---AARSHLKSLCCF 3517
Score = 42 (19.8 bits), Expect = 5.5e-15, Sum P(4) = 5.5e-15
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 481 NADAPSYSSQTWNTIAKRHAQEK 503
+A +PS + T NT+ KR +EK
Sbjct: 2609 SATSPSTPTSTMNTL-KRKLEEK 2630
Score = 42 (19.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 14/50 (28%), Positives = 17/50 (34%)
Query: 616 GAKCSKCCRGIASSDWVRKARDHVYHLAC--FACEACKRQLSTGEEFALH 663
G C C G R AR Y F CE C +T ++H
Sbjct: 699 GGSCVYCKSG---QPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIH 745
Score = 41 (19.5 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 109 QN-SRARQKKHLHTGKMKSSQNRPKYGYYPEPNKSFLVIK 147
QN ++ + +HL G + S Y YY N + +K
Sbjct: 838 QNMTQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLK 877
Score = 39 (18.8 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 304 QEQLNLQEHNQCVKNAINTELVRKETEYQEK--QERILSSLPPAKQRVLTRIVEGQSS 359
Q+Q Q+ Q + +L +++ + Q+K Q++ P A Q T + +G +S
Sbjct: 3380 QQQQQQQQQQQQQQQQQQRQLQQQQQQQQQKVQQQQQQQQQPKASQ---TPVPQGAAS 3434
Score = 39 (18.8 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 638 HVYHLACFACEACKRQLSTGEEFALH 663
HVY + C C T E+ LH
Sbjct: 1407 HVYK---YRCNQCSLAFKTIEKLQLH 1429
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 141 KSFLVIKPQFLEEASLLFHDLHVQIVTEKRFLGGVIGNGD 180
++F +K + LE + L + +Q + GG++ NGD
Sbjct: 1449 RTFQALK-KHLETSHLELSEADIQ-----QLYGGLLANGD 1482
>UNIPROTKB|F1PF36 [details] [associations]
symbol:ZFHX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028 PROSITE:PS50071
PROSITE:PS50157 SMART:SM00355 SMART:SM00389 SMART:SM00451
GO:GO:0005634 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 OMA:PLCQEQL InterPro:IPR027028
PANTHER:PTHR24208:SF42 EMBL:AAEX03005613 Ensembl:ENSCAFT00000018471
Uniprot:F1PF36
Length = 2566
Score = 155 (59.6 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K KR+RTT EQL++L + DSNP + L+ I++ GL KRV QVWFQN+RAR++K
Sbjct: 1849 KDKRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERK 1907
Score = 147 (56.8 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT EQL++L + DSNP + L+ I++ GL KRV QVWFQN+RAR++K
Sbjct: 1852 RLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERK 1907
Score = 132 (51.5 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTG 122
RT FTE Q Q LQ+ F+ + P ++ER+A + GL+ RV VWFQN+R + +K+ G
Sbjct: 1592 RTKFTEFQTQALQSFFETSAYPKDGEVERLASLLGLASRVVVVWFQNARQKARKNAIEG 1650
Score = 132 (51.5 bits), Expect = 0.00029, P = 0.00029
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTG 761
RT FTE Q Q LQ+ F+ + P ++ER+A + GL+ RV VWFQN+R + +K+ G
Sbjct: 1592 RTKFTEFQTQALQSFFETSAYPKDGEVERLASLLGLASRVVVVWFQNARQKARKNAIEG 1650
Score = 124 (48.7 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+R RT + QL++++A ++ P Q+ E + + GL KRV QVWFQN+RA++KK
Sbjct: 2060 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKK 2116
Score = 122 (48.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT + QL++++A ++ P Q+ E + + GL KRV QVWFQN+RA++KK
Sbjct: 2061 RYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKK 2116
Score = 68 (29.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 12 KAKRVRTTFTEEQLQVLQANFQLDSNP 38
K KR+RTT EQL++L + DSNP
Sbjct: 1849 KDKRLRTTILPEQLEILYRWYMQDSNP 1875
Score = 54 (24.1 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP-DG 40
RT FTE Q Q LQ+ F+ + P DG
Sbjct: 1592 RTKFTEFQTQALQSFFETSAYPKDG 1616
>UNIPROTKB|E1BD77 [details] [associations]
symbol:ZFHX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR009057
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028 PROSITE:PS50071
PROSITE:PS50157 SMART:SM00355 SMART:SM00389 SMART:SM00451
GO:GO:0005634 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.160.60
GeneTree:ENSGT00530000063717 CTD:85446 KO:K09379 OMA:PLCQEQL
InterPro:IPR027028 PANTHER:PTHR24208:SF42 EMBL:DAAA02028036
IPI:IPI00700885 RefSeq:XP_002690489.2 RefSeq:XP_589218.6
Ensembl:ENSBTAT00000009273 GeneID:539758 KEGG:bta:539758
Uniprot:E1BD77
Length = 2571
Score = 152 (58.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 30/57 (52%), Positives = 41/57 (71%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT EQL++L + DSNP + L+ I++ GL KRV QVWFQN+RAR++K
Sbjct: 1857 KRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERK 1913
Score = 147 (56.8 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT EQL++L + DSNP + L+ I++ GL KRV QVWFQN+RAR++K
Sbjct: 1858 RLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERK 1913
Score = 134 (52.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTG 122
RT FTE Q Q LQ+ F+ + P ++ER+A + GL+ RV VWFQN+R + +K+ G
Sbjct: 1601 RTKFTEFQTQALQSFFETSAYPKDGEVERLASLLGLASRVVVVWFQNARQKARKNASDG 1659
Score = 134 (52.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTG 761
RT FTE Q Q LQ+ F+ + P ++ER+A + GL+ RV VWFQN+R + +K+ G
Sbjct: 1601 RTKFTEFQTQALQSFFETSAYPKDGEVERLASLLGLASRVVVVWFQNARQKARKNASDG 1659
Score = 124 (48.7 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+R RT + QL++++A ++ P Q+ E + + GL KRV QVWFQN+RA++KK
Sbjct: 2065 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKK 2121
Score = 122 (48.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT + QL++++A ++ P Q+ E + + GL KRV QVWFQN+RA++KK
Sbjct: 2066 RYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKK 2121
Score = 65 (27.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT EQL++L + DSNP
Sbjct: 1857 KRLRTTILPEQLEILYRWYMQDSNP 1881
Score = 54 (24.1 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP-DG 40
RT FTE Q Q LQ+ F+ + P DG
Sbjct: 1601 RTKFTEFQTQALQSFFETSAYPKDG 1625
Score = 47 (21.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLAC--FACEACKRQLSTGEEFALH 663
CS C G A R AR Y+ + CE C +T ++H
Sbjct: 485 CSYCTAGGAHP---RLARGESYNCGYKPYRCEVCNYSTTTKGNLSIH 528
>UNIPROTKB|Q9C0A1 [details] [associations]
symbol:ZFHX2 "Zinc finger homeobox protein 2" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR009057 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
SMART:SM00451 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.160.60 EMBL:AL135999 EMBL:AB028979
EMBL:AB051549 EMBL:AL132855 IPI:IPI00007109 IPI:IPI00926149
RefSeq:NP_207646.2 UniGene:Hs.508937 ProteinModelPortal:Q9C0A1
SMR:Q9C0A1 PhosphoSite:Q9C0A1 DMDM:300669698 PaxDb:Q9C0A1
PRIDE:Q9C0A1 Ensembl:ENST00000419474 GeneID:85446 KEGG:hsa:85446
UCSC:uc010akq.3 CTD:85446 GeneCards:GC14M023990 H-InvDB:HIX0011544
H-InvDB:HIX0172362 HGNC:HGNC:20152 HPA:HPA000720 HPA:HPA005146
neXtProt:NX_Q9C0A1 eggNOG:NOG272646 HOGENOM:HOG000128272
HOVERGEN:HBG063719 InParanoid:Q9UPU6 KO:K09379 OMA:PLCQEQL
OrthoDB:EOG4GHZNM GenomeRNAi:85446 NextBio:76049
ArrayExpress:Q9C0A1 Bgee:Q9C0A1 CleanEx:HS_ZFHX2
Genevestigator:Q9C0A1 GermOnline:ENSG00000136367 InterPro:IPR027028
PANTHER:PTHR24208:SF42 Uniprot:Q9C0A1
Length = 2572
Score = 152 (58.6 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 30/57 (52%), Positives = 41/57 (71%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR+RTT EQL++L + DSNP + L+ I++ GL KRV QVWFQN+RAR++K
Sbjct: 1858 KRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERK 1914
Score = 147 (56.8 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R+RTT EQL++L + DSNP + L+ I++ GL KRV QVWFQN+RAR++K
Sbjct: 1859 RLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERK 1914
Score = 132 (51.5 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTG 122
RT FTE Q Q LQ+ F+ + P ++ER+A + GL+ RV VWFQN+R + +K+ G
Sbjct: 1599 RTKFTEFQTQALQSFFETSAYPKDGEVERLASLLGLASRVVVVWFQNARQKARKNACEG 1657
Score = 124 (48.7 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+R RT + QL++++A ++ P Q+ E + + GL KRV QVWFQN+RA++KK
Sbjct: 2066 RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKK 2122
Score = 122 (48.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT + QL++++A ++ P Q+ E + + GL KRV QVWFQN+RA++KK
Sbjct: 2067 RYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKK 2122
Score = 65 (27.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 14 KRVRTTFTEEQLQVLQANFQLDSNP 38
KR+RTT EQL++L + DSNP
Sbjct: 1858 KRLRTTILPEQLEILYRWYMQDSNP 1882
Score = 54 (24.1 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 17 RTTFTEEQLQVLQANFQLDSNP-DG 40
RT FTE Q Q LQ+ F+ + P DG
Sbjct: 1599 RTKFTEFQTQALQSFFETSAYPKDG 1623
>WB|WBGene00002988 [details] [associations]
symbol:lim-6 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030421 "defecation"
evidence=IMP] [GO:0060756 "foraging behavior" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009449 "gamma-aminobutyric acid
biosynthetic process" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0061038 "uterus morphogenesis"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007409 GO:GO:0010468 GO:GO:0030421
GeneTree:ENSGT00700000104050 GO:GO:0009449 eggNOG:NOG243427
GO:GO:0061038 EMBL:FO080324 GeneID:180459 KEGG:cel:CELE_K03E6.1
CTD:180459 GO:GO:0060756 RefSeq:NP_001256980.1
ProteinModelPortal:Q21192 SMR:Q21192 PaxDb:Q21192
EnsemblMetazoa:K03E6.1b UCSC:K03E6.1 WormBase:K03E6.1b
HOGENOM:HOG000018451 InParanoid:Q21192 OMA:HGNIYCE NextBio:909480
ArrayExpress:Q21192 Uniprot:Q21192
Length = 316
Score = 204 (76.9 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 43/145 (29%), Positives = 69/145 (47%)
Query: 615 FGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
+G +C +C + +D V + YH CF+C +C+R + G+E+ + + V C++ Y
Sbjct: 99 YGKRCRRCMTLLLPTDIVHRVHFMYYHAQCFSCCSCQRPFNLGDEYHVFDGEVFCRNDYQ 158
Query: 675 ELVXXXXXXX---XXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER 731
+ + KR RT +Q + + F+ S P + E+
Sbjct: 159 SICNFQTISNPDPLMEEVVRSEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQ 218
Query: 732 IAQITGLSKRVTQVWFQNSRARQKK 756
+A TGLS RV QVWFQN RA+ KK
Sbjct: 219 LANETGLSVRVVQVWFQNQRAKIKK 243
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 32/87 (36%), Positives = 40/87 (45%)
Query: 31 NFQLDSNPDGFGXXXXXXXXXXXXXXXXXXXRVRTTFTEEQLQVLQANFQLDSNPDGQDL 90
NFQ SNPD R RT +Q + + F+ S P +
Sbjct: 162 NFQTISNPDPL-----MEEVVRSEIHRKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVR 216
Query: 91 ERIAQITGLSKRVTQVWFQNSRARQKK 117
E++A TGLS RV QVWFQN RA+ KK
Sbjct: 217 EQLANETGLSVRVVQVWFQNQRAKIKK 243
>UNIPROTKB|H0YKY2 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0021520
"spinal cord motor neuron cell fate specification" evidence=IEA]
[GO:0021524 "visceral motor neuron differentiation" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
GO:GO:0045665 GO:GO:0005622 Gene3D:2.10.110.10 GO:GO:0031290
EMBL:AC027243 GO:GO:0021520 GO:GO:0021524 HGNC:HGNC:18524
Ensembl:ENST00000558437 Bgee:H0YKY2 Uniprot:H0YKY2
Length = 145
Score = 184 (69.8 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSH 672
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF+L E +LC++
Sbjct: 58 RLFGIKCAKCQVGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRAD 117
Query: 673 Y 673
+
Sbjct: 118 H 118
>WB|WBGene00003000 [details] [associations]
symbol:lin-11 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040026 "positive
regulation of vulval development" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0045595 "regulation of cell differentiation"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001708 GO:GO:0018991
GO:GO:0040010 GO:GO:0045595 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 Gene3D:2.10.110.10 GO:GO:0007413 GO:GO:0040026
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
KO:K09372 EMBL:Z80221 EMBL:X54355 PIR:T27509 RefSeq:NP_492696.1
ProteinModelPortal:P20154 SMR:P20154 STRING:P20154
EnsemblMetazoa:ZC247.3 GeneID:172893 KEGG:cel:CELE_ZC247.3
UCSC:ZC247.3 CTD:172893 WormBase:ZC247.3 InParanoid:P20154
OMA:NDQQFYP NextBio:877423 Uniprot:P20154
Length = 405
Score = 135 (52.6 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHE-DRVLCKS 671
R + +C+ C + D VR+ARD V+H+ CF C C+R L TG++ + E +R +C+S
Sbjct: 121 RRYSQRCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIMEGNRFVCQS 180
Query: 672 HY 673
+
Sbjct: 181 DF 182
Score = 115 (45.5 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK- 755
+K + RTT +QL+ L+ F P E++A TGL+ RV QVWFQN R++++
Sbjct: 239 AKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR 298
Query: 756 -KHLHTGKMKSSQ 767
K L G + S+
Sbjct: 299 MKQLRFGGYRQSR 311
>FB|FBgn0036274 [details] [associations]
symbol:CG4328 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0006911 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0048813
GeneTree:ENSGT00700000104050 EMBL:BT050501 RefSeq:NP_648567.2
UniGene:Dm.27132 SMR:Q9VTW3 IntAct:Q9VTW3 MINT:MINT-301655
EnsemblMetazoa:FBtr0301071 GeneID:39405 KEGG:dme:Dmel_CG4328
UCSC:CG4328-RA FlyBase:FBgn0036274 InParanoid:Q9VTW3 OMA:ETNKENC
OrthoDB:EOG4B8GVN GenomeRNAi:39405 NextBio:813480 Uniprot:Q9VTW3
Length = 544
Score = 201 (75.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELVX 678
C C IA+ + V + ++V+HL CFAC C L GE++ + + ++ C+ Y + V
Sbjct: 259 CLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEVE 318
Query: 679 XXXXXXXXXXXXXXXXXKSKA--KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT 736
+ KR RT +Q + +A+F++ P + E +A+ T
Sbjct: 319 MLQGYDFYGDELFPPKLDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDT 378
Query: 737 GLSKRVTQVWFQNSRARQKK 756
GLS R+ QVWFQN RA+ KK
Sbjct: 379 GLSLRIVQVWFQNQRAKVKK 398
Score = 121 (47.7 bits), Expect = 0.00069, P = 0.00069
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT +Q + +A+F++ P + E +A+ TGLS R+ QVWFQN RA+ KK
Sbjct: 343 RPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKKI--- 399
Query: 122 GKMKSSQNRPKYG 134
+ K+ Q P G
Sbjct: 400 -QKKAKQEPPSKG 411
>UNIPROTKB|H0YM35 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007498 "mesoderm development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0007411 GO:GO:0007498 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 Gene3D:2.10.110.10
GO:GO:0001843 GO:GO:0009953 GO:GO:0021978 GO:GO:0000988
EMBL:AC006450 GO:GO:2000678 HGNC:HGNC:6594 ChiTaRS:LHX2
EMBL:AL158052 Ensembl:ENST00000560961 Bgee:H0YM35 Uniprot:H0YM35
Length = 147
Score = 160 (61.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 612 FRSFGA-KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
+R F +C++C GI++S+ V +ARD VYHL CF C C + L+TG+ F + + V C+
Sbjct: 66 YRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCR 125
Query: 671 SHYLELV 677
H+ L+
Sbjct: 126 LHFEALL 132
Score = 40 (19.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG++S
Sbjct: 12 CAGCGGKIS 20
>ZFIN|ZDB-GENE-041014-332 [details] [associations]
symbol:lmx1a "LIM homeobox transcription factor 1,
alpha" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-041014-332 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
HOGENOM:HOG000231629 CTD:4009 HOVERGEN:HBG052335 EMBL:BX296562
IPI:IPI00496510 RefSeq:NP_001020669.1 UniGene:Dr.108111
Ensembl:ENSDART00000019059 GeneID:558036 KEGG:dre:558036
eggNOG:NOG302270 InParanoid:Q5RI65 OMA:RLYSMQD OrthoDB:EOG4P8FJW
NextBio:20882278 Uniprot:Q5RI65
Length = 366
Score = 135 (52.6 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 184 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 242
Score = 129 (50.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 187 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKK 242
Score = 103 (41.3 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 605 RLSVLICFRS----FGAKCSKCCRGIASSDWVRKARDH-VYHLACFACEACKRQLSTGEE 659
R L C R F +C C I+ S+ V +A+ V+HL CF C C +L G+
Sbjct: 67 RNKTLYCKRDYQKLFVVRCQGCSEIISPSELVMRAQGSAVFHLRCFCCCVCGCRLQKGDH 126
Query: 660 FALHEDRVLCKSHY 673
L D + C +H+
Sbjct: 127 CVLRGDGLFCATHF 140
Score = 60 (26.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 623 CRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C + ++ + +D ++H C C +C+ L + L + CK Y +L
Sbjct: 29 CNELIRDRYLLRVQDGLWHERCLHCASCREPLK--DTCFLRNKTLYCKRDYQKL 80
>WB|WBGene00022518 [details] [associations]
symbol:zfh-2 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] Pfam:PF00096 InterPro:IPR001356 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00028 PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355
SMART:SM00389 SMART:SM00451 GO:GO:0005634 GO:GO:0002009
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 GO:GO:0043565
GO:GO:0008270 GO:GO:0040011 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.160.60 GO:GO:0040035 eggNOG:NOG301069
GeneTree:ENSGT00530000063717 EMBL:FO081823 RefSeq:NP_490781.2
ProteinModelPortal:O45019 SMR:O45019 STRING:O45019 PaxDb:O45019
EnsemblMetazoa:ZC123.3 GeneID:171670 KEGG:cel:CELE_ZC123.3
UCSC:ZC123.3 CTD:171670 WormBase:ZC123.3 InParanoid:O45019
OMA:KEECEMC NextBio:872233 Uniprot:O45019
Length = 1565
Score = 120 (47.3 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
KR RT T Q+Q++++ F P + E + + GL KRV QVWFQN+RA+++K
Sbjct: 1289 KRFRTHLTPMQVQMMKSVFNEYKTPSMAECELLGKEVGLHKRVVQVWFQNARAKERK 1345
Score = 116 (45.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 35 DSNPDGFGXXXXXXXXXXXXXXXXXXXRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA 94
DS FG R RT T Q+Q++++ F P + E +
Sbjct: 1263 DSAFAAFGLQLANSTSGSECRSPASNKRFRTHLTPMQVQMMKSVFNEYKTPSMAECELLG 1322
Query: 95 QITGLSKRVTQVWFQNSRARQKK 117
+ GL KRV QVWFQN+RA+++K
Sbjct: 1323 KEVGLHKRVVQVWFQNARAKERK 1345
Score = 114 (45.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 697 SKAKRV-RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
S +R RT FT+ QL+ LQ F + P DLE +++ LS RV VWFQN+R + +
Sbjct: 978 SSGRRANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQLSPRVIVVWFQNARQKAR 1037
Query: 756 K 756
K
Sbjct: 1038 K 1038
Score = 112 (44.5 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RT FT+ QL+ LQ F + P DLE +++ LS RV VWFQN+R + +K
Sbjct: 985 RTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQLSPRVIVVWFQNARQKARK 1038
Score = 96 (38.9 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 16/56 (28%), Positives = 37/56 (66%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT T++QL+VL+ F ++++P ++ ++Q L ++V + WF+N+ ++++
Sbjct: 807 RARTRITDDQLKVLRQYFNINNSPSEAQIKEMSQKASLPEKVIKHWFRNTLFKERQ 862
Score = 70 (29.7 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 9 SKSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
+ S AKR RT T++QL+VL+ F ++++P
Sbjct: 801 NNSPAKRARTRITDDQLKVLRQYFNINNSP 830
Score = 42 (19.8 bits), Expect = 1.8e-11, Sum P(4) = 1.8e-11
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 448 RDSSSTSPALIADFKINGVWEAGGTAFFDNRIVNADAPS 486
RDS STSP+ D + + A F ++ N+ + S
Sbjct: 1242 RDSISTSPSRSEDDVLTEALDDSAFAAFGLQLANSTSGS 1280
>ZFIN|ZDB-GENE-990415-133 [details] [associations]
symbol:isl2b "islet2b" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-990415-133 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG264882 GeneTree:ENSGT00700000104050 HOVERGEN:HBG004671
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38454 EMBL:AL845510
EMBL:BC095011 EMBL:U09404 IPI:IPI00485578 PIR:I51735
RefSeq:NP_571039.1 UniGene:Dr.20916 ProteinModelPortal:P53407
SMR:P53407 STRING:P53407 Ensembl:ENSDART00000055936 GeneID:30151
KEGG:dre:30151 CTD:30151 InParanoid:P53407 OMA:HAHKQAE
NextBio:20806624 Bgee:P53407 Uniprot:P53407
Length = 358
Score = 186 (70.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 613 RSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKS- 671
R FG KC+KC G +SSD V +ARD VYH+ CF C C RQL G+EF++ ++ +LC++
Sbjct: 83 RLFGIKCAKCTLGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRAD 142
Query: 672 HYLEL 676
H L L
Sbjct: 143 HGLAL 147
Score = 136 (52.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 45/159 (28%), Positives = 65/159 (40%)
Query: 600 ILLKGRLSV--LICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTG 657
++++ R SV + CFR CS C R + D RD L C A + G
Sbjct: 101 LVMRARDSVYHIECFR-----CSVCSRQLLPGDEF-SVRDE--ELLCRADHGLALERGPG 152
Query: 658 EEFALHEDRVLCKSHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQAN 717
L + + L + K RVRT E+QL L+
Sbjct: 153 GS-PLSPGNIHTRG--LHMAADPVSVRQTPHRNHVHKQSEKTTRVRTVLNEKQLHTLRTC 209
Query: 718 FQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 210 YNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 248
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 193 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKRSIL 252
Query: 122 GKMKSSQNRPK 132
K Q+ K
Sbjct: 253 MKQLQQQHGDK 263
>WB|WBGene00003167 [details] [associations]
symbol:mec-3 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IMP] [GO:0007638 "mechanosensory behavior" evidence=IMP]
[GO:0009612 "response to mechanical stimulus" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0016358 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0001190 GO:GO:0000977
GeneTree:ENSGT00700000104050 GO:GO:0007638 eggNOG:NOG257130
EMBL:L02877 EMBL:M20244 EMBL:Z81054 PIR:S28390 PIR:T20458
RefSeq:NP_001023111.1 RefSeq:NP_001023112.1 UniGene:Cel.19754
ProteinModelPortal:P09088 SMR:P09088 STRING:P09088 PaxDb:P09088
EnsemblMetazoa:F01D4.6a GeneID:177938 KEGG:cel:CELE_F01D4.6
UCSC:F01D4.6a CTD:177938 WormBase:F01D4.6a WormBase:F01D4.6b
HOGENOM:HOG000064530 InParanoid:P09088 KO:K09376 OMA:VIDSIGV
NextBio:899038 ArrayExpress:P09088 Uniprot:P09088
Length = 321
Score = 116 (45.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK-- 755
K + RTT + QL VL F P ++A TGLS RV QVWFQN R++++
Sbjct: 216 KRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQVWFQNRRSKERRL 275
Query: 756 KHL 758
KHL
Sbjct: 276 KHL 278
Score = 108 (43.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 618 KCSKCCRGIASSDWVRKARDH-VYHLACFACEACKRQLSTGEEFALHEDR--VLCKSHY 673
+C+ C +G++ +D V K + V+H+ C C C R LS GE+ + + V C SHY
Sbjct: 88 RCAGCKKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLSPGEQILVDDTMMTVSCMSHY 146
Score = 70 (29.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 618 KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHY 673
KC+ CC ++ + + YH C C C+ L+ E+ R+ C HY
Sbjct: 28 KCN-CCNEQIYDRYIYRMDNRSYHENCVKCTICESPLA--EKCFWKNGRIYCSQHY 80
>UNIPROTKB|F1PUR9 [details] [associations]
symbol:DUXA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 OMA:PGYATKQ
EMBL:AAEX03000701 Ensembl:ENSCAFT00000003829
GeneTree:ENSGT00610000085975 Uniprot:F1PUR9
Length = 163
Score = 110 (43.8 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA-QITGLSKRVTQVWFQNSRAR---QKK 117
R RT FTE+QL++L F + P +R+A ++ R+ QVWFQN RAR QKK
Sbjct: 17 RSRTKFTEDQLKILIKAFDQNPYPGYATKQRLALEVNAEESRI-QVWFQNRRARHQCQKK 75
Query: 118 HLHTGKMKSSQNRPKYGYYPE 138
++SSQ++ YPE
Sbjct: 76 SEPDEDLESSQDQD----YPE 92
Score = 108 (43.1 bits), Expect = 0.00072, P = 0.00072
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA-QITGLSKRVTQVWFQNSRAR---QK 755
+R RT FTE+QL++L F + P +R+A ++ R+ QVWFQN RAR QK
Sbjct: 16 RRSRTKFTEDQLKILIKAFDQNPYPGYATKQRLALEVNAEESRI-QVWFQNRRARHQCQK 74
Query: 756 KHLHTGKMKSSQN 768
K ++SSQ+
Sbjct: 75 KSEPDEDLESSQD 87
Score = 90 (36.7 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+R RT++T QL L F + P E++A+ G+ + Q+WFQN R+R
Sbjct: 101 RRCRTSYTSSQLHTLIEAFTNNPYPGIDTREQLAKEIGIPESRVQIWFQNRRSR 154
>ZFIN|ZDB-GENE-030131-6699 [details] [associations]
symbol:wu:fa03a11 "wu:fa03a11" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001356
InterPro:IPR007087 InterPro:IPR009057 InterPro:IPR015880
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00028
PROSITE:PS50071 PROSITE:PS50157 SMART:SM00355 SMART:SM00389
ZFIN:ZDB-GENE-030131-6699 GO:GO:0005634 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00530000063717 InterPro:IPR027028
PANTHER:PTHR24208:SF42 EMBL:BX294113 IPI:IPI00902115
Ensembl:ENSDART00000122689 Bgee:E7FAS9 Uniprot:E7FAS9
Length = 1529
Score = 122 (48.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+R RT +QL +L + D NP + E+I++ L K+V Q+WFQN RAR++K
Sbjct: 1035 RRSRTIIHADQLDILYGCYFKDPNPGKHEFEQISEWVNLPKKVVQIWFQNMRARERK 1091
Score = 120 (47.3 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT +QL +L + D NP + E+I++ L K+V Q+WFQN RAR++K
Sbjct: 1036 RSRTIIHADQLDILYGCYFKDPNPGKHEFEQISEWVNLPKKVVQIWFQNMRARERK 1091
Score = 120 (47.3 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
S +R RT T QL +LQ+ ++ ++P+ + E + GL +V Q+WFQN+RA++K+
Sbjct: 1338 STPRRPRTHLTSLQLSILQSCYETCAHPNALECEAVGTELGLPLKVVQIWFQNTRAKEKR 1397
Query: 757 -HLHTGKM 763
L KM
Sbjct: 1398 WRLQQEKM 1405
Score = 58 (25.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 64 RTTFTEEQLQVLQANFQL-D----SNPDGQDLERIAQITGLSKRVTQVWFQNS-RARQKK 117
R TE Q QVL A + D S+P +D E + + GLS + WF ++ +++ K
Sbjct: 599 RPVLTEFQSQVLWAFLESRDDAETSSPQREDCEALGREVGLSGEEVRKWFLDAWQSKDKD 658
Query: 118 HL 119
L
Sbjct: 659 RL 660
Score = 42 (19.8 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 10 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 40
+SK K F +E ++ + N +D + DG
Sbjct: 653 QSKDKDRLDRFHDESMEEEEGNLMIDESEDG 683
>RGD|621166 [details] [associations]
symbol:Lmo1 "LIM domain only 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:621166
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:2.10.110.10 eggNOG:NOG316748 HOGENOM:HOG000232175
HOVERGEN:HBG054231 OrthoDB:EOG405S2K EMBL:AF353304 IPI:IPI00197708
UniGene:Rn.25503 ProteinModelPortal:Q99MB5 SMR:Q99MB5 STRING:Q99MB5
UCSC:RGD:621166 InParanoid:Q99MB5 Genevestigator:Q99MB5
GermOnline:ENSRNOG00000008041 Uniprot:Q99MB5
Length = 145
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 54 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 111
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC++ Y E
Sbjct: 112 FCVGDKFFLKNNMILCQTDYEE 133
>UNIPROTKB|Q99MB5 [details] [associations]
symbol:Lmo3 "LIM domain only protein 3" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 RGD:621166 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 eggNOG:NOG316748
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:AF353304 IPI:IPI00197708 UniGene:Rn.25503
ProteinModelPortal:Q99MB5 SMR:Q99MB5 STRING:Q99MB5 UCSC:RGD:621166
InParanoid:Q99MB5 Genevestigator:Q99MB5
GermOnline:ENSRNOG00000008041 Uniprot:Q99MB5
Length = 145
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 54 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 111
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC++ Y E
Sbjct: 112 FCVGDKFFLKNNMILCQTDYEE 133
>UNIPROTKB|F1NBH5 [details] [associations]
symbol:LOC100858792 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0045944 GO:GO:0000122 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:GSFETQV EMBL:AADN02030560
IPI:IPI00812377 Ensembl:ENSGALT00000009595 Uniprot:F1NBH5
Length = 156
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 65 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 122
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 123 FCVGDKFFLKNNMILCQMDYEE 144
>UNIPROTKB|Q0P5B3 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:BC120273 IPI:IPI00699115 RefSeq:NP_001069363.1
ProteinModelPortal:Q0P5B3 SMR:Q0P5B3 STRING:Q0P5B3
Ensembl:ENSBTAT00000045558 GeneID:527152 KEGG:bta:527152 CTD:4004
eggNOG:NOG288849 InParanoid:Q0P5B3 OMA:GSFETQV NextBio:20874528
Uniprot:Q0P5B3
Length = 156
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 65 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 122
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 123 FCVGDKFFLKNNMILCQMDYEE 144
>UNIPROTKB|E2RLZ2 [details] [associations]
symbol:LMO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0000122 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
CTD:4004 OMA:GSFETQV EMBL:AAEX03012888 RefSeq:XP_851199.1
ProteinModelPortal:E2RLZ2 Ensembl:ENSCAFT00000011097 GeneID:610473
KEGG:cfa:610473 Uniprot:E2RLZ2
Length = 156
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 65 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 122
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 123 FCVGDKFFLKNNMILCQMDYEE 144
>UNIPROTKB|E9PK83 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 EMBL:AC091013 HGNC:HGNC:6641 ChiTaRS:LMO1
IPI:IPI00979256 ProteinModelPortal:E9PK83 SMR:E9PK83
Ensembl:ENST00000534484 ArrayExpress:E9PK83 Bgee:E9PK83
Uniprot:E9PK83
Length = 145
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 54 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 111
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 112 FCVGDKFFLKNNMILCQMDYEE 133
>UNIPROTKB|E9PSF5 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 CTD:4004
EMBL:AC091013 UniGene:Hs.654426 GeneID:4004 KEGG:hsa:4004
HGNC:HGNC:6641 ChiTaRS:LMO1 IPI:IPI00877062 RefSeq:NP_001257357.1
ProteinModelPortal:E9PSF5 SMR:E9PSF5 Ensembl:ENST00000428101
UCSC:uc001mgh.1 ArrayExpress:E9PSF5 Bgee:E9PSF5 Uniprot:E9PSF5
Length = 155
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 64 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 121
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 122 FCVGDKFFLKNNMILCQMDYEE 143
>UNIPROTKB|P25800 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 HOGENOM:HOG000232175 HOVERGEN:HBG054231
OrthoDB:EOG405S2K CTD:4004 eggNOG:NOG288849 OMA:GSFETQV EMBL:M26682
EMBL:AJ277662 EMBL:AC091013 EMBL:BC069673 EMBL:BC069752
EMBL:BC069793 EMBL:BC096056 EMBL:BC096057 IPI:IPI00396316
PIR:A32795 RefSeq:NP_002306.1 UniGene:Hs.654426
ProteinModelPortal:P25800 SMR:P25800 STRING:P25800
PhosphoSite:P25800 DMDM:132532 PRIDE:P25800 DNASU:4004
Ensembl:ENST00000335790 GeneID:4004 KEGG:hsa:4004 UCSC:uc001mgg.1
GeneCards:GC11M008202 HGNC:HGNC:6641 MIM:186921 neXtProt:NX_P25800
PharmGKB:PA30407 InParanoid:P25800 ChiTaRS:LMO1 GenomeRNAi:4004
NextBio:15708 PMAP-CutDB:P25800 ArrayExpress:P25800 Bgee:P25800
CleanEx:HS_LMO1 Genevestigator:P25800 GermOnline:ENSG00000166407
Uniprot:P25800
Length = 156
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 65 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 122
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 123 FCVGDKFFLKNNMILCQMDYEE 144
>UNIPROTKB|Q3B8H4 [details] [associations]
symbol:lmo1 "Rhombotin-1" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:Q13642 HOVERGEN:HBG054231 CTD:4004
EMBL:BC106431 RefSeq:NP_001089735.1 UniGene:Xl.82232
ProteinModelPortal:Q3B8H4 SMR:Q3B8H4 GeneID:734798 KEGG:xla:734798
Uniprot:Q3B8H4
Length = 156
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 65 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 122
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 123 FCVGDKFFLKNNMILCQMDYEE 144
>ZFIN|ZDB-GENE-021115-6 [details] [associations]
symbol:lmo1 "LIM domain only 1" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-021115-6 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 OrthoDB:EOG405S2K CTD:4004 eggNOG:NOG288849
OMA:GSFETQV EMBL:AF398514 EMBL:BC092690 IPI:IPI00488481
RefSeq:NP_775326.1 UniGene:Dr.77277 ProteinModelPortal:Q8JFQ2
SMR:Q8JFQ2 STRING:Q8JFQ2 Ensembl:ENSDART00000044208 GeneID:280646
KEGG:dre:280646 InParanoid:Q8JFQ2 NextBio:20804856
ArrayExpress:Q8JFQ2 Bgee:Q8JFQ2 Uniprot:Q8JFQ2
Length = 155
Score = 147 (56.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 64 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 121
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 122 FCVGDKFFLKNNMILCQMDYEE 143
>UNIPROTKB|A9ED79 [details] [associations]
symbol:LMO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670 HOVERGEN:HBG054231
CTD:4004 OMA:GSFETQV EMBL:FP340194 EMBL:AB304399
RefSeq:NP_001106526.1 SMR:A9ED79 Ensembl:ENSSSCT00000022371
GeneID:100127356 KEGG:ssc:100127356 Uniprot:A9ED79
Length = 156
Score = 146 (56.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 65 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 122
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 123 FCVGDKFFLKNNMILCQLDYEE 144
>MGI|MGI:102812 [details] [associations]
symbol:Lmo1 "LIM domain only 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:102812
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0000122 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OrthoDB:EOG405S2K CTD:4004
eggNOG:NOG288849 OMA:GSFETQV EMBL:AJ296304 EMBL:BC053074
IPI:IPI00410856 RefSeq:NP_476514.1 UniGene:Mm.360145
ProteinModelPortal:Q924W9 SMR:Q924W9 STRING:Q924W9
PhosphoSite:Q924W9 PRIDE:Q924W9 Ensembl:ENSMUST00000036992
GeneID:109594 KEGG:mmu:109594 InParanoid:Q924W9 NextBio:362409
Bgee:Q924W9 CleanEx:MM_LMO1 Genevestigator:Q924W9
GermOnline:ENSMUSG00000036111 Uniprot:Q924W9
Length = 156
Score = 146 (56.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 594 MYIRVRILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQ 653
+Y + ++L R L F + G C+ C + I + + V +ARD+VYHL CFAC+ C ++
Sbjct: 65 LYTKANLILCRR-DYLRLFGTTG-NCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQR 122
Query: 654 LSTGEEFALHEDRVLCKSHYLE 675
G++F L + +LC+ Y E
Sbjct: 123 FCVGDKFFLKNNMILCQVDYEE 144
>UNIPROTKB|G3V309 [details] [associations]
symbol:DUX4L2 "Double homeobox protein 4-like protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC126281 HGNC:HGNC:37267 HGNC:HGNC:37266
SMR:G3V309 Ensembl:ENST00000554376 Ensembl:ENST00000554416
Uniprot:G3V309
Length = 163
Score = 102 (41.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 21 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 80
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 81 ESRPWPGRRGPPEG 94
Score = 94 (38.1 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>UNIPROTKB|F1NBH3 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:HTEIGIY EMBL:AADN02006566
EMBL:AADN02006567 EMBL:AADN02006568 IPI:IPI00590236
Ensembl:ENSGALT00000009596 Uniprot:F1NBH3
Length = 147
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 59 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 118
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 119 KFFLKNNMILCQTDYEE 135
>UNIPROTKB|Q2KIA3 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:BC112712 IPI:IPI00722914 RefSeq:NP_001039802.1
UniGene:Bt.97510 ProteinModelPortal:Q2KIA3 SMR:Q2KIA3
Ensembl:ENSBTAT00000043044 GeneID:532870 KEGG:bta:532870 CTD:55885
eggNOG:NOG316748 HOGENOM:HOG000232175 HOVERGEN:HBG054231
InParanoid:Q2KIA3 OMA:HTEIGIY OrthoDB:EOG405S2K NextBio:20875832
Uniprot:Q2KIA3
Length = 145
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 57 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 116
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 117 KFFLKNNMILCQTDYEE 133
>UNIPROTKB|E2RHK8 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 EMBL:AAEX03015233
RefSeq:XP_003433617.1 ProteinModelPortal:E2RHK8
Ensembl:ENSCAFT00000020038 GeneID:486662 KEGG:cfa:486662
Uniprot:E2RHK8
Length = 156
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 68 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 127
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 128 KFFLKNNMILCQTDYEE 144
>UNIPROTKB|J9NZN8 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 OMA:HTEIGIY
EMBL:AAEX03015233 GeneID:486662 KEGG:cfa:486662 RefSeq:XP_866550.2
Ensembl:ENSCAFT00000044444 Uniprot:J9NZN8
Length = 163
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 75 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 134
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 135 KFFLKNNMILCQTDYEE 151
>UNIPROTKB|J9P4K0 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 EMBL:AAEX03015233
GeneID:486662 KEGG:cfa:486662 RefSeq:XP_866536.1
ProteinModelPortal:J9P4K0 Ensembl:ENSCAFT00000048736 Uniprot:J9P4K0
Length = 145
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 57 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 116
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 117 KFFLKNNMILCQTDYEE 133
>UNIPROTKB|B4DG90 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 CTD:55885
HOGENOM:HOG000232175 HOVERGEN:HBG054231 EMBL:AC007529 EMBL:AC007552
RefSeq:NP_001001395.1 UniGene:Hs.504908 DNASU:55885 GeneID:55885
KEGG:hsa:55885 HGNC:HGNC:6643 GenomeRNAi:55885 NextBio:61212
EMBL:AK294474 EMBL:AK316021 IPI:IPI00910185 RefSeq:NP_001230541.1
SMR:B4DG90 STRING:B4DG90 Ensembl:ENST00000541295 UCSC:uc010shy.2
Uniprot:B4DG90
Length = 163
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 75 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 134
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 135 KFFLKNNMILCQTDYEE 151
>UNIPROTKB|Q8TAP4 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 EMBL:CH471094 CTD:55885
eggNOG:NOG316748 HOGENOM:HOG000232175 HOVERGEN:HBG054231
OMA:HTEIGIY OrthoDB:EOG405S2K EMBL:AB044745 EMBL:AB044746
EMBL:AK095595 EMBL:AK294909 EMBL:AC007529 EMBL:AC007552
EMBL:BC026311 EMBL:BC050085 IPI:IPI00744307 RefSeq:NP_001001395.1
RefSeq:NP_001230538.1 RefSeq:NP_001230539.1 RefSeq:NP_001230540.1
RefSeq:NP_001230542.1 RefSeq:NP_061110.2 UniGene:Hs.504908
ProteinModelPortal:Q8TAP4 SMR:Q8TAP4 IntAct:Q8TAP4
MINT:MINT-2874669 STRING:Q8TAP4 PhosphoSite:Q8TAP4 DMDM:34098603
PRIDE:Q8TAP4 DNASU:55885 Ensembl:ENST00000261169
Ensembl:ENST00000320122 Ensembl:ENST00000354662
Ensembl:ENST00000441439 Ensembl:ENST00000447609
Ensembl:ENST00000534946 Ensembl:ENST00000535535
Ensembl:ENST00000537304 Ensembl:ENST00000540445
Ensembl:ENST00000540848 Ensembl:ENST00000541846 GeneID:55885
KEGG:hsa:55885 UCSC:uc001rdk.2 GeneCards:GC12M016701 HGNC:HGNC:6643
MIM:180386 neXtProt:NX_Q8TAP4 PharmGKB:PA30409 InParanoid:Q8TAP4
PhylomeDB:Q8TAP4 GenomeRNAi:55885 NextBio:61212 ArrayExpress:Q8TAP4
Bgee:Q8TAP4 CleanEx:HS_LMO3 Genevestigator:Q8TAP4
GermOnline:ENSG00000048540 Uniprot:Q8TAP4
Length = 145
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 57 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 116
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 117 KFFLKNNMILCQTDYEE 133
>UNIPROTKB|A9ED84 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 HOVERGEN:HBG054231
OMA:HTEIGIY OrthoDB:EOG405S2K EMBL:CU915363 EMBL:AB304400
RefSeq:NP_001106155.1 UniGene:Ssc.8086 SMR:A9ED84
Ensembl:ENSSSCT00000000642 GeneID:100127154 KEGG:ssc:100127154
eggNOG:NOG315878 Uniprot:A9ED84
Length = 145
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 57 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 116
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 117 KFFLKNNMILCQTDYEE 133
>MGI|MGI:102810 [details] [associations]
symbol:Lmo3 "LIM domain only 3" species:10090 "Mus musculus"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
MGI:MGI:102810 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
CTD:55885 eggNOG:NOG316748 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:AK034177 EMBL:BC057086 IPI:IPI00406211 RefSeq:NP_997105.1
UniGene:Mm.490545 ProteinModelPortal:Q8BZL8 SMR:Q8BZL8
STRING:Q8BZL8 PhosphoSite:Q8BZL8 PRIDE:Q8BZL8
Ensembl:ENSMUST00000161450 Ensembl:ENSMUST00000162772
Ensembl:ENSMUST00000163024 GeneID:109593 KEGG:mmu:109593
UCSC:uc009enl.1 InParanoid:Q8BZL8 NextBio:362405 Bgee:Q8BZL8
CleanEx:MM_LMO3 Genevestigator:Q8BZL8 GermOnline:ENSMUSG00000030226
Uniprot:Q8BZL8
Length = 145
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 57 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 116
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 117 KFFLKNNMILCQTDYEE 133
>RGD|1561357 [details] [associations]
symbol:RGD1561357 "similar to LIM domain only 3" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 RGD:1561357 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 OMA:HTEIGIY IPI:IPI00480651
RefSeq:XP_003749911.1 ProteinModelPortal:F2Z3R1 SMR:F2Z3R1
Ensembl:ENSRNOT00000010623 GeneID:497798 KEGG:rno:497798 CTD:497798
Uniprot:F2Z3R1
Length = 145
Score = 143 (55.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+D+VYHL CFAC+ C ++ G+
Sbjct: 57 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGD 116
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 117 KFFLKNNMILCQTDYEE 133
>UNIPROTKB|A6NLW8 [details] [associations]
symbol:DUXA "Double homeobox protein A" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC025588
IPI:IPI00556392 RefSeq:NP_001012747.1 UniGene:Hs.585857
ProteinModelPortal:A6NLW8 SMR:A6NLW8 PhosphoSite:A6NLW8
PRIDE:A6NLW8 Ensembl:ENST00000554048 GeneID:503835 KEGG:hsa:503835
UCSC:uc002qoa.1 CTD:503835 GeneCards:GC19M057663 H-InvDB:HIX0016200
HGNC:HGNC:32179 MIM:611168 neXtProt:NX_A6NLW8 PharmGKB:PA142671924
eggNOG:NOG289976 HOGENOM:HOG000112297 InParanoid:A6NLW8 OMA:PGYATKQ
OrthoDB:EOG4N04FW GenomeRNAi:503835 NextBio:112042 Bgee:A6NLW8
CleanEx:HS_DUXA Genevestigator:A6NLW8 Uniprot:A6NLW8
Length = 204
Score = 102 (41.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA-QITGLSKRVTQVWFQNSRARQ--KKH 118
R RT FTEEQL++L F P +++A +I R+ Q+WFQN RAR +K
Sbjct: 17 RCRTKFTEEQLKILINTFNQKPYPGYATKQKLALEINTEESRI-QIWFQNRRARHGFQKR 75
Query: 119 LHTGKMKSSQNR 130
++SSQ++
Sbjct: 76 PEAETLESSQSQ 87
Score = 95 (38.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+A+R RTT++ QL L F + P E +A+ G+ + Q+WFQN R+R
Sbjct: 100 EARRCRTTYSASQLHTLIKAFMKNPYPGIDSREELAKEIGVPESRVQIWFQNRRSR 155
Score = 63 (27.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 2 ADSESSHS--KSKAKRVRTTFTEEQLQVLQANFQLDSNP 38
A+ SH K+ +R RT FTEEQL++L F P
Sbjct: 2 AEDTYSHKMVKTNHRRCRTKFTEEQLKILINTFNQKPYP 40
>UNIPROTKB|Q9YH16 [details] [associations]
symbol:lmo3 "LIM domain only protein 3" species:8355
"Xenopus laevis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 HSSP:P61969 HOVERGEN:HBG054231
EMBL:U94991 EMBL:BC079734 RefSeq:NP_001084116.1 UniGene:Xl.6611
ProteinModelPortal:Q9YH16 SMR:Q9YH16 GeneID:399311 KEGG:xla:399311
CTD:399311 Xenbase:XB-GENE-6254052 Uniprot:Q9YH16
Length = 156
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+++VYHL CFAC+ C ++ G+
Sbjct: 68 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGD 127
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 128 KFFLKNNMILCQTDYEE 144
>ZFIN|ZDB-GENE-050522-201 [details] [associations]
symbol:lmo3 "LIM domain only 3" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-050522-201 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OMA:HTEIGIY EMBL:AL954848
IPI:IPI00855464 UniGene:Dr.85219 SMR:B0R1F5
Ensembl:ENSDART00000112860 Uniprot:B0R1F5
Length = 167
Score = 139 (54.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 605 RLSVLIC----FRSFGA--KCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGE 658
+ ++++C R FG C+ C + I + + V +A+++VYHL CFAC+ C ++ G+
Sbjct: 79 KANLILCRRDYLRLFGVTGNCAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGD 138
Query: 659 EFALHEDRVLCKSHYLE 675
+F L + +LC++ Y E
Sbjct: 139 KFFLKNNMILCQTDYEE 155
>ZFIN|ZDB-GENE-081105-149 [details] [associations]
symbol:si:dkey-90l8.3 "si:dkey-90l8.3" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-081105-149 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177 EMBL:CU984584
IPI:IPI00501922 Ensembl:ENSDART00000074551 Uniprot:F1QMD9
Length = 165
Score = 123 (48.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 613 RSFG--AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
R FG CS C + I +S+ V +A+ +VYHL CF+C C+ QL G+ F + C+
Sbjct: 81 RLFGHTGACSACGQSIPASEMVMRAQGNVYHLKCFSCATCRNQLVPGDRFHYVNGTIFCE 140
Score = 39 (18.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 398 CDGCGGEMS 406
C GCGG +S
Sbjct: 24 CAGCGGRIS 32
>UNIPROTKB|E1C639 [details] [associations]
symbol:Gga.30007 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02006258 IPI:IPI00598714 Ensembl:ENSGALT00000020505
OMA:WRKHEKF Uniprot:E1C639
Length = 160
Score = 134 (52.2 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R+RTTFT EQLQ L+ FQ+ PD ++A L + Q+WFQN RA+ +KH
Sbjct: 84 RIRTTFTAEQLQELEKIFQVTHYPDVHIRNQLAAKINLPEARVQIWFQNQRAKWRKHEKF 143
Query: 122 GKMKSSQNRPKYGYYP 137
G Q+ + + P
Sbjct: 144 GNFGGLQHLTEVDFIP 159
Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
K K +R+RTTFT EQLQ L+ FQ+ PD ++A L + Q+WFQN RA+ +
Sbjct: 80 KGK-RRIRTTFTAEQLQELEKIFQVTHYPDVHIRNQLAAKINLPEARVQIWFQNQRAKWR 138
Query: 756 KHLHTGKMKSSQN 768
KH G Q+
Sbjct: 139 KHEKFGNFGGLQH 151
>UNIPROTKB|F1N959 [details] [associations]
symbol:F1N959 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02072754 EMBL:AADN02072755
EMBL:AADN02072756 EMBL:AADN02072757 EMBL:AADN02072758
IPI:IPI00819883 Ensembl:ENSGALT00000024015 ArrayExpress:F1N959
Uniprot:F1N959
Length = 303
Score = 134 (52.2 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 132 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 190
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 135 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 190
Score = 62 (26.9 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 14/56 (25%), Positives = 22/56 (39%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYL 674
C C I +R + D +H AC C C + L + + + CK Y+
Sbjct: 3 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 58
>UNIPROTKB|E1BWH2 [details] [associations]
symbol:E1BWH2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001102 "RNA polymerase
II activating transcription factor binding" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0003139 "secondary heart field specification"
evidence=IEA] [GO:0003148 "outflow tract septum morphogenesis"
evidence=IEA] [GO:0003203 "endocardial cushion morphogenesis"
evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0021524 "visceral motor neuron differentiation"
evidence=IEA] [GO:0021559 "trigeminal nerve development"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0032725 "positive regulation of granulocyte macrophage
colony-stimulating factor production" evidence=IEA] [GO:0032729
"positive regulation of interferon-gamma production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032731 "positive regulation of interleukin-1
beta production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045766 "positive regulation of angiogenesis"
evidence=IEA] [GO:0048880 "sensory system development"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] [GO:0050728 "negative regulation of
inflammatory response" evidence=IEA] [GO:0055010 "ventricular
cardiac muscle tissue morphogenesis" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0060379 "cardiac
muscle cell myoblast differentiation" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060413 "atrial septum
morphogenesis" evidence=IEA] [GO:0060913 "cardiac cell fate
determination" evidence=IEA] [GO:0071657 "positive regulation of
granulocyte colony-stimulating factor production" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0043524
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0090090 GO:GO:0001105
GO:GO:0001158 GO:GO:0042517 GeneTree:ENSGT00700000104050
GO:GO:0043388 GO:GO:0003266 IPI:IPI00598855 OMA:TDMGDMG
EMBL:AADN02072754 EMBL:AADN02072755 EMBL:AADN02072756
EMBL:AADN02072757 EMBL:AADN02072758 Ensembl:ENSGALT00000038907
ArrayExpress:E1BWH2 Uniprot:E1BWH2
Length = 339
Score = 134 (52.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 170 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 228
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 173 RVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 228
Score = 63 (27.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
C C I +R + D +H AC C C + L + + + CK Y+ +
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYIRKI 75
Score = 45 (20.9 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 393 GLPTYCDGCGGEM 405
G+P+ C GCG ++
Sbjct: 12 GIPSLCVGCGNQI 24
>UNIPROTKB|Q5FVB2 [details] [associations]
symbol:lmo4.1 "LIM domain transcription factor LMO4.1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=ISS] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007498 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 GO:GO:0045665 GO:GO:0006351
Gene3D:2.10.110.10 GO:GO:0003712 GO:GO:0007369
GeneTree:ENSGT00700000104177 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 EMBL:BC090104 RefSeq:NP_001015822.1
UniGene:Str.52903 ProteinModelPortal:Q5FVB2 SMR:Q5FVB2
Ensembl:ENSXETT00000050669 GeneID:548539 KEGG:xtr:548539 CTD:548539
Xenbase:XB-GENE-479327 eggNOG:NOG314117 InParanoid:Q5FVB2
OMA:DRYWHTR OrthoDB:EOG4XKV82 Bgee:Q5FVB2 Uniprot:Q5FVB2
Length = 167
Score = 120 (47.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
F S GA CS C + I +S+ V +A+ VYHL CF C C+ +L G+ F + C+
Sbjct: 82 FGSSGA-CSACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRFHYVNGAIFCE 139
Score = 44 (20.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 393 GLPTYCDGCGGEMS 406
G P C GCGG+++
Sbjct: 19 GPPKACAGCGGKIA 32
>WB|WBGene00006778 [details] [associations]
symbol:unc-42 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0040011 "locomotion" evidence=IMP] [GO:0030163 "protein
catabolic process" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030163
GO:GO:0048665 GeneTree:ENSGT00700000104273 EMBL:Z70754 EMBL:Z70780
PIR:T22296 RefSeq:NP_505519.3 ProteinModelPortal:G5EBS8 SMR:G5EBS8
IntAct:G5EBS8 EnsemblMetazoa:F58E6.10 GeneID:192081
KEGG:cel:CELE_F58E6.10 CTD:192081 WormBase:F58E6.10 OMA:AAFQKSH
NextBio:951506 Uniprot:G5EBS8
Length = 264
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 31/58 (53%), Positives = 39/58 (67%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
+R RTTFT+EQLQ L A FQ PD E +A+IT L++ QVWFQN RA+ +KH
Sbjct: 86 RRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQNRRAKHRKH 143
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 34/83 (40%), Positives = 46/83 (55%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTTFT+EQLQ L A FQ PD E +A+IT L++ QVWFQN RA+ +KH
Sbjct: 87 RHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLNEARIQVWFQNRRAKHRKH--- 143
Query: 122 GKMKSSQNRPKYGYYPEPNKSFL 144
K + P + + P + +
Sbjct: 144 EKQLNKAINPPHSFLSNPANTLM 166
>UNIPROTKB|Q6RFH8 [details] [associations]
symbol:DUX4L9 "Double homeobox protein 4C" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008283 "cell proliferation"
evidence=IDA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008283
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0010468 EMBL:AY500824 EMBL:AF146191
IPI:IPI00874112 UniGene:Hs.742140 ProteinModelPortal:Q6RFH8
SMR:Q6RFH8 STRING:Q6RFH8 PhosphoSite:Q6RFH8 PRIDE:Q6RFH8
GeneCards:GC04M190943 H-InvDB:HIX0020902 HGNC:HGNC:33855
neXtProt:NX_Q6RFH8 eggNOG:NOG323819 HOVERGEN:HBG063255
Uniprot:Q6RFH8
Length = 374
Score = 102 (41.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 21 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 80
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 81 ESRPWPGRRGPPEG 94
Score = 94 (38.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>UNIPROTKB|H7BYS6 [details] [associations]
symbol:H7BYS6 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC025287 ProteinModelPortal:H7BYS6 SMR:H7BYS6
Ensembl:ENST00000398113 Bgee:H7BYS6 Uniprot:H7BYS6
Length = 150
Score = 99 (39.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R R + + Q +LQ+ FQ D PD E++A+ G+ + QVWF+N R +Q+K
Sbjct: 1 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRK 56
Score = 74 (31.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 17/57 (29%), Positives = 36/57 (63%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 752
+++ K+ T+T++ +++QA F+ + PD +++A+ TGL + Q+WFQ R+
Sbjct: 85 EARQKQTFITWTQKN-RLVQA-FERNPFPDIATRKKLAEQTGLQESRIQMWFQKQRS 139
>UNIPROTKB|D6RBG8 [details] [associations]
symbol:PITX2 "Pituitary homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
HOGENOM:HOG000231518 EMBL:AC017068 HGNC:HGNC:9005 ChiTaRS:PITX2
IPI:IPI00967695 ProteinModelPortal:D6RBG8 SMR:D6RBG8
Ensembl:ENST00000511990 ArrayExpress:D6RBG8 Bgee:D6RBG8
Uniprot:D6RBG8
Length = 118
Score = 127 (49.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
K + +R RT FT +QLQ L+A FQ + PD E IA T L++ +VWF+N RA+ +
Sbjct: 36 KKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR 95
Query: 756 K 756
K
Sbjct: 96 K 96
Score = 121 (47.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT FT +QLQ L+A FQ + PD E IA T L++ +VWF+N RA+ +K
Sbjct: 41 RQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERN 100
Query: 122 GKMKSSQNRPKYGYYPEPN 140
+ + +N G+ P+ N
Sbjct: 101 QQAELCKN----GFGPQFN 115
>UNIPROTKB|P0CJ87 [details] [associations]
symbol:DUX4L4 "Double homeobox protein 4-like protein 4"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00472083 UniGene:Hs.725918 ProteinModelPortal:P0CJ87
SMR:P0CJ87 PhosphoSite:P0CJ87 Ensembl:ENST00000554637
Ensembl:ENST00000566884 GeneCards:GC04P191023 HGNC:HGNC:38686
neXtProt:NX_P0CJ87 ArrayExpress:P0CJ87 Bgee:P0CJ87 Uniprot:P0CJ87
Length = 422
Score = 102 (41.0 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 21 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 80
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 81 ESRPWPGRRGPPEG 94
Score = 94 (38.1 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>UNIPROTKB|P0CJ85 [details] [associations]
symbol:DUX4L2 "Double homeobox protein 4-like protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.714689 ProteinModelPortal:P0CJ85
SMR:P0CJ85 PhosphoSite:P0CJ85 Ensembl:ENST00000553702
Ensembl:ENST00000562745 GeneCards:GC04P191026 HGNC:HGNC:37267
neXtProt:NX_P0CJ85 ArrayExpress:P0CJ85 Uniprot:P0CJ85
Length = 424
Score = 102 (41.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 21 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 80
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 81 ESRPWPGRRGPPEG 94
Score = 94 (38.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>UNIPROTKB|P0CJ86 [details] [associations]
symbol:DUX4L3 "Double homeobox protein 4-like protein 3"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.723089 ProteinModelPortal:P0CJ86
SMR:P0CJ86 PhosphoSite:P0CJ86 Ensembl:ENST00000557656
Ensembl:ENST00000569113 GeneCards:GC04P191025 HGNC:HGNC:38688
neXtProt:NX_P0CJ86 ArrayExpress:P0CJ86 Uniprot:P0CJ86
Length = 424
Score = 102 (41.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 21 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 80
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 81 ESRPWPGRRGPPEG 94
Score = 94 (38.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>UNIPROTKB|P0CJ88 [details] [associations]
symbol:DUX4L5 "Double homeobox protein 4-like protein 5"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.714687 ProteinModelPortal:P0CJ88
SMR:P0CJ88 PhosphoSite:P0CJ88 Ensembl:ENST00000557283
Ensembl:ENST00000563535 GeneCards:GC04P191017 HGNC:HGNC:38689
neXtProt:NX_P0CJ88 ArrayExpress:P0CJ88 Uniprot:P0CJ88
Length = 424
Score = 102 (41.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 21 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 80
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 81 ESRPWPGRRGPPEG 94
Score = 94 (38.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>UNIPROTKB|P0CJ89 [details] [associations]
symbol:DUX4L6 "Double homeobox protein 4-like protein 6"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.723089 ProteinModelPortal:P0CJ89
SMR:P0CJ89 PhosphoSite:P0CJ89 Ensembl:ENST00000553722
Ensembl:ENST00000563106 GeneCards:GC04P191016 HGNC:HGNC:37265
neXtProt:NX_P0CJ89 ArrayExpress:P0CJ89 Uniprot:P0CJ89
Length = 424
Score = 102 (41.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 21 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 80
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 81 ESRPWPGRRGPPEG 94
Score = 94 (38.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>UNIPROTKB|P0CJ90 [details] [associations]
symbol:DUX4L7 "Double homeobox protein 4-like protein 7"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.714688 ProteinModelPortal:P0CJ90
SMR:P0CJ90 PhosphoSite:P0CJ90 Ensembl:ENST00000553820
Ensembl:ENST00000554906 Ensembl:ENST00000561772
Ensembl:ENST00000566160 GeneCards:GC04P190992 HGNC:HGNC:37266
neXtProt:NX_P0CJ90 ArrayExpress:P0CJ90 Bgee:P0CJ90 Uniprot:P0CJ90
Length = 424
Score = 102 (41.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 21 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 80
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 81 ESRPWPGRRGPPEG 94
Score = 94 (38.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>UNIPROTKB|Q9UBX2 [details] [associations]
symbol:DUX4 "Double homeobox protein 4" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06601
UniGene:Hs.723089 UniGene:Hs.714687 eggNOG:NOG323819
HOVERGEN:HBG063255 EMBL:AF117653 EMBL:AY044051 IPI:IPI00965468
UniGene:Hs.553518 ProteinModelPortal:Q9UBX2 SMR:Q9UBX2
STRING:Q9UBX2 PhosphoSite:Q9UBX2 DMDM:74720085 PRIDE:Q9UBX2
Ensembl:ENST00000565211 Ensembl:ENST00000569241
GeneCards:GC04P191005 HGNC:HGNC:3082 MIM:158900 MIM:606009
neXtProt:NX_Q9UBX2 Orphanet:269 InParanoid:Q9UBX2
ArrayExpress:Q9UBX2 CleanEx:HS_DUX4 Genevestigator:Q9UBX2
GermOnline:ENSG00000075705 Uniprot:Q9UBX2
Length = 424
Score = 102 (41.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 21 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 80
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 81 ESRPWPGRRGPPEG 94
Score = 94 (38.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 93 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 148
>WB|WBGene00000430 [details] [associations]
symbol:ceh-5 species:6239 "Caenorhabditis elegans"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 EMBL:Z81036 PIR:S05706 PIR:T19335 RefSeq:NP_492586.2
ProteinModelPortal:P20269 SMR:P20269 EnsemblMetazoa:C16C2.1
GeneID:191616 KEGG:cel:CELE_C16C2.1 UCSC:C16C2.1 CTD:191616
WormBase:C16C2.1 eggNOG:NOG309408 GeneTree:ENSGT00680000099870
HOGENOM:HOG000017392 InParanoid:P20269 OMA:QNYWTAA NextBio:949690
Uniprot:P20269
Length = 134
Score = 126 (49.4 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ KR RT FT+EQL+ L+ +F G ++A+ GLS +VWFQN R +QKK
Sbjct: 34 RPKRPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQKK 92
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT FT+EQL+ L+ +F G ++A+ GLS +VWFQN R +QKK
Sbjct: 37 RPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQKKIDSR 96
Query: 122 GKMKSSQNRPKYGY 135
+K +P Y
Sbjct: 97 DPIKPETLKPAENY 110
>UNIPROTKB|E9PEK5 [details] [associations]
symbol:DUX4L4 "Double homeobox protein 4-like protein 4"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC126281 IPI:IPI00472083 UniGene:Hs.725918
HGNC:HGNC:38686 RefSeq:NP_001170847.1 ProteinModelPortal:E9PEK5
SMR:E9PEK5 Ensembl:ENST00000538692 GeneID:441056 KEGG:hsa:441056
UCSC:uc010ist.1 CTD:441056 OMA:CHPAPWS GenomeRNAi:441056
NextBio:109726 ArrayExpress:E9PEK5 Bgee:E9PEK5 Uniprot:E9PEK5
Length = 483
Score = 102 (41.0 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 141
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 142 ESRPWPGRRGPPEG 155
Score = 94 (38.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 154 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>RGD|1310011 [details] [associations]
symbol:Mixl1 "Mix paired-like homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0000980 "RNA
polymerase II distal enhancer sequence-specific DNA binding"
evidence=ISO] [GO:0000987 "core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0001071 "nucleic
acid binding transcription factor activity" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001205 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001706 "endoderm formation" evidence=ISO] [GO:0002244
"hematopoietic progenitor cell differentiation" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0007369 "gastrulation" evidence=ISO] [GO:0007492 "endoderm
development" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0035987
"endodermal cell differentiation" evidence=ISO] [GO:0042074 "cell
migration involved in gastrulation" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048565 "digestive tract development"
evidence=ISO] [GO:1901533 "negative regulation of hematopoietic
progenitor cell differentiation" evidence=ISO] [GO:2000382
"positive regulation of mesoderm development" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1310011 GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048565 GO:GO:0042074
GO:GO:0001706 EMBL:CH473985 GeneTree:ENSGT00700000104273 CTD:83881
OrthoDB:EOG4RR6J0 OMA:VFRRTRY IPI:IPI00198812 RefSeq:NP_001099449.1
RefSeq:XP_003751333.1 UniGene:Rn.218456 Ensembl:ENSRNOT00000004244
GeneID:100912275 GeneID:289311 KEGG:rno:100912275 KEGG:rno:289311
UCSC:RGD:1310011 NextBio:629595 Uniprot:D4A558
Length = 231
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT+F+ EQLQ+L+ F+ PD ER+A +T L + QVWFQN RA+ ++
Sbjct: 88 RKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSGK 147
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASL 156
S R + + P P +KPQ EA +
Sbjct: 148 SFQPLSSRREDFLHRPAPGTEARCLKPQLPLEADV 182
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 759
+R RT+F+ EQLQ+L+ F+ PD ER+A +T L + QVWFQN RA+ ++
Sbjct: 87 RRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ-- 144
Query: 760 TGK 762
+GK
Sbjct: 145 SGK 147
>UNIPROTKB|F5GZ66 [details] [associations]
symbol:DUX4L2 "Double homeobox protein 4-like protein 7"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC126281 UniGene:Hs.714689 HGNC:HGNC:37267
UniGene:Hs.723089 HGNC:HGNC:38688 UniGene:Hs.714687 HGNC:HGNC:38689
HGNC:HGNC:37265 UniGene:Hs.714688 HGNC:HGNC:37266 UniGene:Hs.553518
HGNC:HGNC:3082 RefSeq:NP_001120858.2 RefSeq:NP_001120859.2
RefSeq:NP_001120860.2 RefSeq:NP_001120861.2 RefSeq:NP_001157939.1
RefSeq:NP_149418.3 SMR:F5GZ66 DNASU:22947 Ensembl:ENST00000440426
Ensembl:ENST00000553598 Ensembl:ENST00000554668
Ensembl:ENST00000554690 Ensembl:ENST00000555191
Ensembl:ENST00000556625 GeneID:22947 GeneID:653543 GeneID:653544
GeneID:653545 GeneID:653548 GeneID:728410 KEGG:hsa:22947
KEGG:hsa:653543 KEGG:hsa:653544 KEGG:hsa:653545 KEGG:hsa:653548
KEGG:hsa:728410 UCSC:uc001lns.2 CTD:22947 CTD:653543 CTD:653544
CTD:653545 CTD:653548 CTD:728410 NextBio:43707 Uniprot:F5GZ66
Length = 485
Score = 102 (41.0 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLH 120
R R +T Q + L+A F+ + P ER+AQ G+ + Q+WFQN R+RQ ++H
Sbjct: 82 RRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRR 141
Query: 121 TGKMKSSQNRPKYG 134
+ + P G
Sbjct: 142 ESRPWPGRRGPPEG 155
Score = 94 (38.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
+ +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR
Sbjct: 154 EGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR 209
>UNIPROTKB|P91608 [details] [associations]
symbol:Bx "Dttg protein" species:7242 "Drosophila sp."
[GO:0002121 "inter-male aggressive behavior" evidence=IMP]
[GO:0005634 "nucleus" evidence=NAS] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IGI;IMP] [GO:0035218 "leg disc development"
evidence=IMP] [GO:0036011 "imaginal disc-derived leg segmentation"
evidence=IMP] [GO:0042220 "response to cocaine" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0006911 GO:GO:0046872 GO:GO:0042220
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0002121 GO:GO:0045475
GO:GO:0007476 GO:GO:0036011 HSSP:P70662 EMBL:X83012
ProteinModelPortal:P91608 SMR:P91608 FlyBase:FBgn0000242
InParanoid:P91608 Uniprot:P91608
Length = 266
Score = 141 (54.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 603 KGRLSVLIC----FRSFG--AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLST 656
KG L ++C R FG C+ C + I + + V +AR +VYHL CFAC+ C +
Sbjct: 89 KGNL--MLCKRDYLRLFGNTGYCAACSKVIPAFEMVMRARTNVYHLECFACQQCNHRFCV 146
Query: 657 GEEFALHEDRVLCKSHYLE 675
G+ F L E+++LC+ Y E
Sbjct: 147 GDRFYLCENKILCEYDYEE 165
>MGI|MGI:1351322 [details] [associations]
symbol:Mixl1 "Mix1 homeobox-like 1 (Xenopus laevis)"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0000980
"RNA polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0000987 "core promoter proximal region
sequence-specific DNA binding" evidence=IDA] [GO:0001071 "nucleic
acid binding transcription factor activity" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO;IPI] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001205 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001706 "endoderm formation" evidence=IMP] [GO:0002244
"hematopoietic progenitor cell differentiation" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IMP] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007507 "heart development"
evidence=IMP] [GO:0030097 "hemopoiesis" evidence=IDA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0035987 "endodermal cell
differentiation" evidence=IDA] [GO:0042074 "cell migration involved
in gastrulation" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0048565 "digestive tract development"
evidence=IMP] [GO:1901533 "negative regulation of hematopoietic
progenitor cell differentiation" evidence=IDA] [GO:2000382
"positive regulation of mesoderm development" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:1351322 GO:GO:0007507 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000980 GO:GO:0000978 GO:GO:0001077 GO:GO:0000790
GO:GO:0001190 GO:GO:0048565 GO:GO:0042074 GO:GO:0002244 HSSP:P06601
GO:GO:2000382 GeneTree:ENSGT00700000104273 GO:GO:0035987 CTD:83881
eggNOG:NOG288598 HOVERGEN:HBG106595 OrthoDB:EOG4RR6J0 GO:GO:0001205
GO:GO:1901533 EMBL:AF135063 EMBL:AF154573 EMBL:AF201959
EMBL:AF447591 EMBL:BC099876 EMBL:BC099877 IPI:IPI00124691
RefSeq:NP_038757.1 UniGene:Mm.103647 ProteinModelPortal:Q9WUI0
SMR:Q9WUI0 STRING:Q9WUI0 PhosphoSite:Q9WUI0 PRIDE:Q9WUI0
Ensembl:ENSMUST00000027778 GeneID:27217 KEGG:mmu:27217
UCSC:uc007dwp.1 HOGENOM:HOG000113594 InParanoid:Q9WUI0 OMA:VFRRTRY
NextBio:305112 Bgee:Q9WUI0 CleanEx:MM_MIXL1 Genevestigator:Q9WUI0
Uniprot:Q9WUI0
Length = 231
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RT+F+ EQLQ+L+ F+ PD ER+A +T L + QVWFQN RA+ ++
Sbjct: 88 RKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQSGK 147
Query: 122 GKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEEASL 156
S R + + P P +KPQ EA +
Sbjct: 148 SFQPLSSRRGVFLHCPAPGTEARCLKPQLPLEADV 182
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 759
+R RT+F+ EQLQ+L+ F+ PD ER+A +T L + QVWFQN RA+ ++
Sbjct: 87 RRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQVWFQNRRAKSRRQ-- 144
Query: 760 TGK 762
+GK
Sbjct: 145 SGK 147
>ZFIN|ZDB-GENE-010702-1 [details] [associations]
symbol:lmo4a "LIM domain only 4a" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0030900 "forebrain
development" evidence=IMP;IDA] [GO:0031076 "embryonic camera-type
eye development" evidence=IMP;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-010702-1 GO:GO:0046872
GO:GO:0008270 GO:GO:0030900 Gene3D:2.10.110.10 GO:GO:0031076
GeneTree:ENSGT00700000104177 HSSP:P70662 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 OMA:DRYWHTR EMBL:CR855258
EMBL:BC045835 EMBL:AY028903 IPI:IPI00495249 RefSeq:NP_817093.1
UniGene:Dr.107376 SMR:Q8QG63 STRING:Q8QG63
Ensembl:ENSDART00000085219 GeneID:114412 KEGG:dre:114412 CTD:114412
InParanoid:Q8QG63 OrthoDB:EOG4T4CWR NextBio:20796903 Uniprot:Q8QG63
Length = 167
Score = 118 (46.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 613 RSFG--AKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
R FG CS C + I +S+ V +A+ +VYHL CF C C+ +L G+ F + C+
Sbjct: 80 RLFGHSGACSACGQSIPASEMVMRAQGNVYHLKCFTCATCRNRLVPGDRFHYVNGTIFCE 139
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 381 DALALRYNHGLKGLPTYCDGCGGEMS 406
++ A+ G G C GCGG +S
Sbjct: 7 ESSAVAVTGGSGGAVRSCAGCGGRIS 32
Score = 43 (20.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 398 CDGCGGEMSVTHALNCKKGGLVKHGHDYLR 427
C C ++ + KGG++ +DY+R
Sbjct: 51 CSCCQAQLGEIGSTCFSKGGMILCRNDYIR 80
>UNIPROTKB|F1NYH7 [details] [associations]
symbol:F1NYH7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 EMBL:AADN02024154 EMBL:AADN02024155
EMBL:AADN02024156 EMBL:AADN02024157 EMBL:AADN02024158
IPI:IPI00587855 Ensembl:ENSGALT00000006292 ArrayExpress:F1NYH7
Uniprot:F1NYH7
Length = 188
Score = 125 (49.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
K K +R RTTFT EQL+ L+ F+ PD E +AQ L++ QVWF N RAR +
Sbjct: 125 KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWR 184
Query: 756 K 756
K
Sbjct: 185 K 185
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RTTFT EQL+ L+ F+ PD E +AQ L++ QVWF N RAR +K
Sbjct: 130 RSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRK 185
Score = 43 (20.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 172 LGGVIGNGDEKKNYVKEKV 190
LGGV NG N+++ K+
Sbjct: 8 LGGVFINGRPLPNHIRHKI 26
>UNIPROTKB|F1LTM6 [details] [associations]
symbol:F1LTM6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00558159
Ensembl:ENSRNOT00000047637 OMA:GRTNTRA Uniprot:F1LTM6
Length = 140
Score = 99 (39.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
S ++R RT +Q ++L F+ + P E++ Q TGL++ +WFQN RARQ +
Sbjct: 66 SDSRRPRTRLNLQQRRILVQAFERNPLPGFATREQLGQRTGLNEDTIHIWFQNRRARQAR 125
Score = 59 (25.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 71 QLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHTGKMKSSQNR 130
Q + L + F + P D + +A+ L +VWFQN R+R + +T + +N
Sbjct: 1 QKKALLSAFSKNKYPSFWDRQELARQIQLPASRIRVWFQNQRSRTGR-TNTRASGTGRNW 59
Query: 131 P 131
P
Sbjct: 60 P 60
>UNIPROTKB|O43812 [details] [associations]
symbol:DUX1 "Double homeobox protein 1" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0000976
HSSP:P06601 EMBL:AJ001481 IPI:IPI00472029 RefSeq:NP_036278.1
UniGene:Hs.274469 ProteinModelPortal:O43812 SMR:O43812 PRIDE:O43812
DNASU:26584 GeneID:26584 KEGG:hsa:26584 CTD:26581 CTD:26584
GeneCards:GC10U901220 HGNC:HGNC:3079 MIM:611441 neXtProt:NX_O43812
PharmGKB:PA27535 HOVERGEN:HBG081466 GenomeRNAi:26584 NextBio:48948
CleanEx:HS_DUX1 Genevestigator:O43812 Uniprot:O43812
Length = 170
Score = 101 (40.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
K +R RT T Q +L F+ D P E +A+ TGL + Q+WFQN RAR +
Sbjct: 93 KGRRKRTAITGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHR 150
Score = 71 (30.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 68 TEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ-KKHLHTGKMKS 126
T Q L+A F+ + P E +AQ + + Q+WFQN R+ Q ++H +
Sbjct: 27 TPSQSDALRACFERNLYPGIATKEELAQGIDIPEPRVQIWFQNERSCQLRQHRRQSRPWP 86
Query: 127 SQNRPKYG 134
+ P+ G
Sbjct: 87 GRRDPQKG 94
>MGI|MGI:1277097 [details] [associations]
symbol:Alx3 "aristaless-like homeobox 3" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IGI]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
[GO:0042981 "regulation of apoptotic process" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:1277097 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704
CTD:257 eggNOG:NOG292934 HOVERGEN:HBG004213 KO:K09323 OMA:PYSHPHG
OrthoDB:EOG40K810 GO:GO:0007389 EMBL:U96109 IPI:IPI00115634
RefSeq:NP_031467.1 UniGene:Mm.10112 ProteinModelPortal:O70137
SMR:O70137 STRING:O70137 PhosphoSite:O70137 PRIDE:O70137
DNASU:11694 Ensembl:ENSMUST00000014747 GeneID:11694 KEGG:mmu:11694
InParanoid:O70137 NextBio:279353 Bgee:O70137 CleanEx:MM_ALX3
Genevestigator:O70137 GermOnline:ENSMUSG00000014603 Uniprot:O70137
Length = 343
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KSK +R RTTF+ QL+ L+ FQ PD E++A T L++ QVWFQN RA+ +
Sbjct: 150 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 209
Query: 756 KHLHTGKMKSSQN 768
K GKM+ +N
Sbjct: 210 KRERYGKMQEGRN 222
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTTF+ QL+ L+ FQ PD E++A T L++ QVWFQN RA+ +K
Sbjct: 155 RNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERY 214
Query: 122 GKMKSSQN 129
GKM+ +N
Sbjct: 215 GKMQEGRN 222
>ZFIN|ZDB-GENE-030328-42 [details] [associations]
symbol:pnx "posterior neuron-specific homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030328-42 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 HSSP:P13297 HOVERGEN:HBG066288 EMBL:BC162069
EMBL:BC162454 EMBL:AB067731 IPI:IPI00491629 RefSeq:NP_840087.1
UniGene:Dr.88552 STRING:Q8AXR6 GeneID:352939 KEGG:dre:352939
CTD:352939 eggNOG:NOG325253 HOGENOM:HOG000205901 InParanoid:Q8AXR6
OrthoDB:EOG4H72D8 NextBio:20812680 Uniprot:Q8AXR6
Length = 182
Score = 128 (50.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
K K+KR+RT FT +QL++L+ +FQ + IA GLS+ ++WFQN R + K
Sbjct: 64 KVKSKRIRTAFTLDQLRILERSFQSSHYLSVFERHCIASALGLSETQVKIWFQNRRTKWK 123
Query: 756 KHL--HTGKMKS 765
K L H G+ +S
Sbjct: 124 KELDGHGGEEQS 135
Score = 114 (45.2 bits), Expect = 0.00028, P = 0.00028
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHL-- 119
R+RT FT +QL++L+ +FQ + IA GLS+ ++WFQN R + KK L
Sbjct: 69 RIRTAFTLDQLRILERSFQSSHYLSVFERHCIASALGLSETQVKIWFQNRRTKWKKELDG 128
Query: 120 HTGKMKS 126
H G+ +S
Sbjct: 129 HGGEEQS 135
>UNIPROTKB|F1P7I2 [details] [associations]
symbol:ALX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
OMA:PYSHPHG EMBL:AAEX03004725 EMBL:AAEX03004724
Ensembl:ENSCAFT00000031481 Uniprot:F1P7I2
Length = 254
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KSK +R RTTF+ QL+ L+ FQ PD E++A T L++ QVWFQN RA+ +
Sbjct: 61 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 120
Query: 756 KHLHTGKMKSSQN 768
K GK++ +N
Sbjct: 121 KRERFGKIQEGRN 133
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTTF+ QL+ L+ FQ PD E++A T L++ QVWFQN RA+ +K
Sbjct: 66 RNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERF 125
Query: 122 GKMKSSQN 129
GK++ +N
Sbjct: 126 GKIQEGRN 133
>UNIPROTKB|F1S615 [details] [associations]
symbol:LOC100621405 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
OMA:PYSHPHG EMBL:CU137690 Ensembl:ENSSSCT00000007462 Uniprot:F1S615
Length = 254
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
KSK +R RTTF+ QL+ L+ FQ PD E++A T L++ QVWFQN RA+ +
Sbjct: 61 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 120
Query: 756 KHLHTGKMKSSQN 768
K GK++ +N
Sbjct: 121 KRERYGKIQEGRN 133
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLHT 121
R RTTF+ QL+ L+ FQ PD E++A T L++ QVWFQN RA+ +K
Sbjct: 66 RNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERY 125
Query: 122 GKMKSSQN 129
GK++ +N
Sbjct: 126 GKIQEGRN 133
>UNIPROTKB|E1C2D6 [details] [associations]
symbol:E1C2D6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021542 "dentate gyrus development"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0021953 "central nervous system neuron differentiation"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001558 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
EMBL:AADN02034025 EMBL:AADN02034026 EMBL:AADN02034027
EMBL:AADN02034028 EMBL:AADN02034029 IPI:IPI00590021
Ensembl:ENSGALT00000005411 OMA:XKSDDEE Uniprot:E1C2D6
Length = 386
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 44/150 (29%), Positives = 64/150 (42%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLC-- 669
F S C CC + +S+ +R + HV + C K S ++ +C
Sbjct: 114 FSSVSVSCYHCCF-VCASEGLRGSNAHVLQMGQIRC---KGNPSPAKQIFRKVSPQICTP 169
Query: 670 ---KSHYLELVXXXXXXXXXXXXXXXXXXKSKAKRVRTTFTEEQLQVLQANFQLDSNPDG 726
KS + V + KR RT T +Q + +A+F++ S P
Sbjct: 170 SPGKSDDEDSVCKMGPASAKGAEEGKDH--KRPKRPRTILTTQQRRAFKASFEVSSKPCR 227
Query: 727 QDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ E +A TGLS RV QVWFQN RA+ KK
Sbjct: 228 KVRETLAAETGLSVRVVQVWFQNQRAKMKK 257
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK--HL 119
R RT T +Q + +A+F++ S P + E +A TGLS RV QVWFQN RA+ KK
Sbjct: 202 RPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR 261
Query: 120 HTGKMKSSQNRPKYGYYPEPNKS 142
+ + QN + +PN S
Sbjct: 262 QQQQQQDQQNTQRLSS-AQPNSS 283
>UNIPROTKB|F1NZI9 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 IPI:IPI00579776 OMA:GVSMANS EMBL:AADN02026599
Ensembl:ENSGALT00000006733 Uniprot:F1NZI9
Length = 165
Score = 120 (47.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
K K +R RTTF QLQ L+ F+ PD E +A+ LS+ QVWFQN RA+ +
Sbjct: 13 KKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR 72
Query: 756 KH 757
++
Sbjct: 73 RN 74
Score = 109 (43.4 bits), Expect = 0.00060, P = 0.00060
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R RTTF QLQ L+ F+ PD E +A+ LS+ QVWFQN RA+ +++
Sbjct: 18 RNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRN 74
>UNIPROTKB|Q90963 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 EMBL:X79695
IPI:IPI00579776 PIR:S49440 UniGene:Gga.53985
ProteinModelPortal:Q90963 SMR:Q90963 STRING:Q90963 eggNOG:NOG309174
InParanoid:Q90963 Uniprot:Q90963
Length = 165
Score = 120 (47.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 696 KSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
K K +R RTTF QLQ L+ F+ PD E +A+ LS+ QVWFQN RA+ +
Sbjct: 13 KKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR 72
Query: 756 KH 757
++
Sbjct: 73 RN 74
Score = 109 (43.4 bits), Expect = 0.00060, P = 0.00060
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R RTTF QLQ L+ F+ PD E +A+ LS+ QVWFQN RA+ +++
Sbjct: 18 RNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRN 74
>UNIPROTKB|E1BYB0 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02012827 EMBL:AADN02012828
IPI:IPI00819278 Ensembl:ENSGALT00000010105 ArrayExpress:E1BYB0
Uniprot:E1BYB0
Length = 165
Score = 117 (46.2 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
F + GA CS C + I +S+ V +A+ +VYHL CF C C+ +L G+ F + C+
Sbjct: 81 FGNSGA-CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCE 138
Score = 37 (18.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG+++
Sbjct: 23 CAGCGGKIA 31
>UNIPROTKB|Q3SWZ8 [details] [associations]
symbol:LMO4 "LIM domain transcription factor LMO4"
species:9913 "Bos taurus" [GO:0050865 "regulation of cell
activation" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0042659
"regulation of cell fate specification" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003281 "ventricular septum development" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366 GO:GO:0001843
GO:GO:0048538 GO:GO:0001158 GO:GO:0021527 GO:GO:0042659
GO:GO:0003281 GO:GO:0021514 GeneTree:ENSGT00700000104177
HOGENOM:HOG000232175 HOVERGEN:HBG054231 eggNOG:NOG314117
OrthoDB:EOG4XKV82 OMA:ALSWKRC EMBL:BC104582 IPI:IPI00705980
RefSeq:NP_001029923.1 UniGene:Bt.3730 ProteinModelPortal:Q3SWZ8
SMR:Q3SWZ8 PRIDE:Q3SWZ8 Ensembl:ENSBTAT00000000389 GeneID:614212
KEGG:bta:614212 CTD:8543 InParanoid:Q3SWZ8 NextBio:20898998
GO:GO:0050865 Uniprot:Q3SWZ8
Length = 165
Score = 117 (46.2 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKRQLSTGEEFALHEDRVLCK 670
F + GA CS C + I +S+ V +A+ +VYHL CF C C+ +L G+ F + C+
Sbjct: 81 FGNSGA-CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCE 138
Score = 37 (18.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 398 CDGCGGEMS 406
C GCGG+++
Sbjct: 23 CAGCGGKIA 31
WARNING: HSPs involving 272 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 768 714 0.00084 121 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 522
No. of states in DFA: 628 (67 KB)
Total size of DFA: 401 KB (2193 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.22u 0.10s 60.32t Elapsed: 00:00:04
Total cpu time: 60.25u 0.10s 60.35t Elapsed: 00:00:04
Start: Thu Aug 15 11:51:55 2013 End: Thu Aug 15 11:51:59 2013
WARNINGS ISSUED: 2