RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17256
(768 letters)
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 66
Score = 73.3 bits (180), Expect = 7e-17
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 61
Score = 73.3 bits (180), Expect = 7e-17
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K RVRT E+QL L+ + + PD E++ ++TGLS RV +VWFQN R + KK
Sbjct: 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 61
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 65
Score = 69.9 bits (171), Expect = 1e-15
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
K +R RTTF+ QL L+ F+ PD E +AQ T L++ QVWFQN RAR +K
Sbjct: 1 KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQ 60
Score = 69.9 bits (171), Expect = 1e-15
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
K +R RTTF+ QL L+ F+ PD E +AQ T L++ QVWFQN RAR +K
Sbjct: 1 KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFQNRRARLRKQ 60
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 58
Score = 69.9 bits (171), Expect = 1e-15
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
++ R +++ QL+ L+ + + +I+ T LS+R +WFQN R ++KK
Sbjct: 2 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKK 58
Score = 69.9 bits (171), Expect = 1e-15
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
++ R +++ QL+ L+ + + +I+ T LS+R +WFQN R ++KK
Sbjct: 2 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKK 58
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 68
Score = 69.8 bits (171), Expect = 1e-15
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
+R RT+FT+EQ++ L+ F+ PD ER+A L + QVWF N RA+ ++
Sbjct: 2 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 59
Score = 69.8 bits (171), Expect = 1e-15
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
+R RT+FT+EQ++ L+ F+ PD ER+A L + QVWF N RA+ ++
Sbjct: 2 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 59
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 88
Score = 70.0 bits (171), Expect = 2e-15
Identities = 21/74 (28%), Positives = 30/74 (40%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVT 104
+ T S +RT FT QL L+ F + IA L++
Sbjct: 12 NPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQV 71
Query: 105 QVWFQNSRARQKKH 118
++WFQN R +QKK
Sbjct: 72 KIWFQNRRMKQKKR 85
Score = 68.5 bits (167), Expect = 5e-15
Identities = 20/66 (30%), Positives = 28/66 (42%)
Query: 692 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 751
S +RT FT QL L+ F + IA L++ ++WFQN R
Sbjct: 20 SEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRR 79
Query: 752 ARQKKH 757
+QKK
Sbjct: 80 MKQKKR 85
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 77
Score = 69.5 bits (170), Expect = 2e-15
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 51 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 110
+ + ++ R +T+ Q L+ F + +A++ L++R ++WFQN
Sbjct: 4 AANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQN 63
Query: 111 SRARQKKH 118
R + KK
Sbjct: 64 RRMKMKKI 71
Score = 69.5 bits (170), Expect = 2e-15
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 690 SESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQN 749
+ + ++ R +T+ Q L+ F + +A++ L++R ++WFQN
Sbjct: 4 AANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQN 63
Query: 750 SRARQKKH 757
R + KK
Sbjct: 64 RRMKMKKI 71
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens)
[TaxId: 9606]}
Length = 57
Score = 68.3 bits (167), Expect = 3e-15
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
K + F+ +Q L+ F+ + +R+A++ LS+R + WFQN RA+ ++
Sbjct: 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 57
Score = 68.3 bits (167), Expect = 3e-15
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
K + F+ +Q L+ F+ + +R+A++ LS+R + WFQN RA+ ++
Sbjct: 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRR 57
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 68.9 bits (168), Expect = 4e-15
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 684 SDDGADSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD----SNPDGQDLERIAQITGLS 739
S + S S S KR RT FT EQ + + A + D +E+ TG+
Sbjct: 2 SSGSSGSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVR 61
Query: 740 KRVTQVWFQNSRARQKKH 757
++V ++W N++
Sbjct: 62 RQVLKIWMHNNKNSGPSS 79
Score = 68.5 bits (167), Expect = 6e-15
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 45 STDHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLD----SNPDGQDLERIAQITGLS 100
S+ + S S S KR RT FT EQ + + A + D +E+ TG+
Sbjct: 2 SSGSSGSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVR 61
Query: 101 KRVTQVWFQNSRARQKKH 118
++V ++W N++
Sbjct: 62 RQVLKIWMHNNKNSGPSS 79
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 57
Score = 67.6 bits (165), Expect = 5e-15
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
R RT FT +QL L+ F ++ +A L + +VWFQN R + K+
Sbjct: 1 RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKR 56
Score = 67.6 bits (165), Expect = 5e-15
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 701 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
R RT FT +QL L+ F ++ +A L + +VWFQN R + K+
Sbjct: 1 RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKR 56
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 60
Score = 66.9 bits (163), Expect = 1e-14
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
+R RT FT +QLQ L+A FQ + PD E IA T L++ +VWF+N RA+ +K
Sbjct: 2 RRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR 59
Score = 66.9 bits (163), Expect = 1e-14
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
+R RT FT +QLQ L+A FQ + PD E IA T L++ +VWF+N RA+ +K
Sbjct: 2 RRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR 59
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 77
Score = 67.0 bits (163), Expect = 1e-14
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 53 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
S +K ++ R FT+ Q L+ F+ + E +A + L+ ++WFQN R
Sbjct: 2 SDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHR 61
Query: 113 ARQKKHLHTGKMKSS 127
+ K+ + +
Sbjct: 62 YKTKRAQNEKGYEGH 76
Score = 67.0 bits (163), Expect = 1e-14
Identities = 17/75 (22%), Positives = 33/75 (44%)
Query: 692 SSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 751
S +K ++ R FT+ Q L+ F+ + E +A + L+ ++WFQN R
Sbjct: 2 SDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHR 61
Query: 752 ARQKKHLHTGKMKSS 766
+ K+ + +
Sbjct: 62 YKTKRAQNEKGYEGH 76
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 67
Score = 66.9 bits (163), Expect = 1e-14
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 120
+R RTTFT Q+ L+ +F L ++ L ++WF+N R R K
Sbjct: 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSD 61
Query: 121 TGKMKS 126
K +S
Sbjct: 62 QHKDQS 67
Score = 66.9 bits (163), Expect = 1e-14
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKHLH 759
+R RTTFT Q+ L+ +F L ++ L ++WF+N R R K
Sbjct: 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKIWFKNRRRRHKIQSD 61
Query: 760 TGKMKS 765
K +S
Sbjct: 62 QHKDQS 67
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 58
Score = 66.1 bits (161), Expect = 2e-14
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
++ RT FT QL L+ F+ + + L++ ++WFQN RA+ K+
Sbjct: 1 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 57
Score = 66.1 bits (161), Expect = 2e-14
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
++ RT FT QL L+ F+ + + L++ ++WFQN RA+ K+
Sbjct: 1 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 57
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 56
Score = 65.6 bits (160), Expect = 3e-14
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
R T+T Q L+ F + + IA L++R ++WFQN R + KK
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKE 55
Score = 65.6 bits (160), Expect = 3e-14
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
R T+T Q L+ F + + IA L++R ++WFQN R + KK
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKIWFQNRRMKWKKE 55
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster
[TaxId: 7227]}
Length = 53
Score = 64.5 bits (157), Expect = 6e-14
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 114
R RT F+ EQL L+ F + + ++++ GL++ ++WFQN+RA+
Sbjct: 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNARAK 53
Score = 64.5 bits (157), Expect = 6e-14
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 701 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
R RT F+ EQL L+ F + + ++++ GL++ ++WFQN+RA+
Sbjct: 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNARAK 53
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 64.3 bits (156), Expect = 1e-13
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQ-LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 114
S S R RT + E L +LQ+ + PD + + ++ L K +FQN R
Sbjct: 3 SGSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYH 62
Query: 115 QKKH 118
K
Sbjct: 63 VKHS 66
Score = 64.3 bits (156), Expect = 1e-13
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 695 SKSKAKRVRTTFTEEQLQVLQANFQ-LDSNPDGQDLERIAQITGLSKRVTQVWFQNSRAR 753
S S R RT + E L +LQ+ + PD + + ++ L K +FQN R
Sbjct: 3 SGSSGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYH 62
Query: 754 QKKH 757
K
Sbjct: 63 VKHS 66
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 64.2 bits (156), Expect = 1e-13
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 60 AKRVRTTFTEEQLQVLQANF---QLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
A+R R F ++ ++L F + P + E +A+ G++ WF N R R K
Sbjct: 1 ARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYK 60
Query: 117 KHLHTGKMKSSQN 129
K + GK + N
Sbjct: 61 K--NIGKFQEEAN 71
Score = 64.2 bits (156), Expect = 1e-13
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 699 AKRVRTTFTEEQLQVLQANF---QLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
A+R R F ++ ++L F + P + E +A+ G++ WF N R R K
Sbjct: 1 ARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYK 60
Query: 756 KHLHTGKMKSSQN 768
K + GK + N
Sbjct: 61 K--NIGKFQEEAN 71
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 58
Score = 63.8 bits (155), Expect = 1e-13
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ RTT + L+ +F S P Q++ R+A+ L K V +VWF N R R+K+
Sbjct: 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR 56
Score = 63.8 bits (155), Expect = 1e-13
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 701 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ RTT + L+ +F S P Q++ R+A+ L K V +VWF N R R+K+
Sbjct: 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR 56
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 68
Score = 63.4 bits (154), Expect = 2e-13
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 61 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
++ R F++ Q+ L+ F+ + E +A + L+ ++WFQN R + K+
Sbjct: 3 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 60
Score = 63.4 bits (154), Expect = 2e-13
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 700 KRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
++ R F++ Q+ L+ F+ + E +A + L+ ++WFQN R + K+
Sbjct: 3 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 60
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 53
Score = 62.2 bits (151), Expect = 4e-13
Identities = 12/53 (22%), Positives = 28/53 (52%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
+++ + + L+ F+ + + ++ E +A+ G++ +VWF N R R K
Sbjct: 1 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 53
Score = 62.2 bits (151), Expect = 4e-13
Identities = 12/53 (22%), Positives = 28/53 (52%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
+++ + + L+ F+ + + ++ E +A+ G++ +VWF N R R K
Sbjct: 1 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVWFINKRMRSK 53
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 61.6 bits (149), Expect = 9e-13
Identities = 20/60 (33%), Positives = 26/60 (43%)
Query: 59 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
KR RT+ L+ F P Q + IA GL K V +VWF N R + K+
Sbjct: 7 ARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDVVRVWFCNRRQKGKRS 66
Score = 61.6 bits (149), Expect = 9e-13
Identities = 20/60 (33%), Positives = 26/60 (43%)
Query: 698 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
KR RT+ L+ F P Q + IA GL K V +VWF N R + K+
Sbjct: 7 ARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDVVRVWFCNRRQKGKRS 66
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1
(Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 62.0 bits (150), Expect = 1e-12
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 15/81 (18%)
Query: 62 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA---------------QITGLSKRVTQV 106
R T+ +E L V+++ F + PD E IA + ++
Sbjct: 2 GSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYN 61
Query: 107 WFQNSRARQKKHLHTGKMKSS 127
WF N R K+ + + S
Sbjct: 62 WFANRRKEIKRRANIAAILES 82
Score = 62.0 bits (150), Expect = 1e-12
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 15/81 (18%)
Query: 701 RVRTTFTEEQLQVLQANFQLDSNPDGQDLERIA---------------QITGLSKRVTQV 745
R T+ +E L V+++ F + PD E IA + ++
Sbjct: 2 GSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYN 61
Query: 746 WFQNSRARQKKHLHTGKMKSS 766
WF N R K+ + + S
Sbjct: 62 WFANRRKEIKRRANIAAILES 82
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 72
Score = 61.5 bits (149), Expect = 1e-12
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 60 AKRVRTTFTEEQLQVLQANFQLDSN-PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 118
T TE+Q+++L+ NF + PD L IA GL++ TQ WF+ A ++
Sbjct: 1 GSEGAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWRRS 60
Score = 61.5 bits (149), Expect = 1e-12
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 699 AKRVRTTFTEEQLQVLQANFQLDSN-PDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 757
T TE+Q+++L+ NF + PD L IA GL++ TQ WF+ A ++
Sbjct: 1 GSEGAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQTQKWFKQRLAEWRRS 60
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 60.9 bits (148), Expect = 1e-12
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Query: 60 AKRVRTTFTEEQLQVLQANF---QLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
K R + V+++ P + ++IA T L+ WF N+R R
Sbjct: 2 GKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRIL 61
Query: 117 K 117
+
Sbjct: 62 Q 62
Score = 60.9 bits (148), Expect = 1e-12
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Query: 699 AKRVRTTFTEEQLQVLQANF---QLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
K R + V+++ P + ++IA T L+ WF N+R R
Sbjct: 2 GKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRIL 61
Query: 756 K 756
+
Sbjct: 62 Q 62
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 31
Score = 59.0 bits (143), Expect = 3e-12
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACF 645
CS C + I +S+ V +A+ +VYHL CF
Sbjct: 5 CSACGQSIPASELVMRAQGNVYHLKCF 31
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 50
Score = 59.1 bits (143), Expect = 4e-12
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 112
R FT+ Q + L A F+ + P + I+Q GL +F N+R
Sbjct: 2 RLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNAR 50
Score = 59.1 bits (143), Expect = 4e-12
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSR 751
R FT+ Q + L A F+ + P + I+Q GL +F N+R
Sbjct: 2 RLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSNFFMNAR 50
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 58.8 bits (142), Expect = 7e-12
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
RT+ L+ +F + P +D+ IA+ + K V +VWF N R ++K+
Sbjct: 2 RTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKR 55
Score = 58.8 bits (142), Expect = 7e-12
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
RT+ L+ +F + P +D+ IA+ + K V +VWF N R ++K+
Sbjct: 2 RTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFSNRRQKEKR 55
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 60
Score = 57.5 bits (139), Expect = 2e-11
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 67 FTEEQLQVLQANFQLDSN---PDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
FT+E +++L++ F + D + LE + + T LS+ + W N R ++K
Sbjct: 5 FTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKT 58
Score = 57.5 bits (139), Expect = 2e-11
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 706 FTEEQLQVLQANFQLDSN---PDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
FT+E +++L++ F + D + LE + + T LS+ + W N R ++K
Sbjct: 5 FTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNWVSNRRRKEKT 58
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 52
Score = 56.7 bits (137), Expect = 4e-11
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 68 TEEQLQVLQANFQLDS-NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
T + +L+ F + +PD + LE +++ R Q WF+ R ++K
Sbjct: 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 51
Score = 56.7 bits (137), Expect = 4e-11
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 707 TEEQLQVLQANFQLDS-NPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
T + +L+ F + +PD + LE +++ R Q WF+ R ++K
Sbjct: 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKP 51
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 59
Score = 53.6 bits (129), Expect = 5e-10
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 62 RVRTTFTEEQLQVLQANFQLDS-NPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 116
+ E L+ F + PD + L+ +++ S R Q WF++ R + K
Sbjct: 3 KDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSVRKIQCWFRHRRNQDK 58
Score = 53.6 bits (129), Expect = 5e-10
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 701 RVRTTFTEEQLQVLQANFQLDS-NPDGQDLERIAQITGLSKRVTQVWFQNSRARQK 755
+ E L+ F + PD + L+ +++ S R Q WF++ R + K
Sbjct: 3 KDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSVRKIQCWFRHRRNQDK 58
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 53.6 bits (128), Expect = 7e-10
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 58 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 117
+ T EQL+VLQA+F S ++L R+ T L++R WF + +
Sbjct: 2 DFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKAL 61
Query: 118 HLHTGKMKSS 127
++ S
Sbjct: 62 KEEKMEIDES 71
Score = 53.6 bits (128), Expect = 7e-10
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 697 SKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 756
+ T EQL+VLQA+F S ++L R+ T L++R WF + +
Sbjct: 2 DFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKAL 61
Query: 757 HLHTGKMKSS 766
++ S
Sbjct: 62 KEEKMEIDES 71
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Rat
(Rattus rattus) [TaxId: 10117]}
Length = 78
Score = 50.2 bits (119), Expect = 1e-08
Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 21/76 (27%)
Query: 64 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT---------------------GLSKR 102
R + Q+L ++ NP ++ E + + +++
Sbjct: 1 RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEV 60
Query: 103 VTQVWFQNSRARQKKH 118
WF N R +
Sbjct: 61 RVYNWFANRRKEEAFR 76
Score = 50.2 bits (119), Expect = 1e-08
Identities = 10/76 (13%), Positives = 22/76 (28%), Gaps = 21/76 (27%)
Query: 703 RTTFTEEQLQVLQANFQLDSNPDGQDLERIAQIT---------------------GLSKR 741
R + Q+L ++ NP ++ E + + +++
Sbjct: 1 RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEV 60
Query: 742 VTQVWFQNSRARQKKH 757
WF N R +
Sbjct: 61 RVYNWFANRRKEEAFR 76
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez
{Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 48.2 bits (114), Expect = 7e-08
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 56 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 115
S S KR T+EQL +L++ F +D +++ QITGL + WF ++R
Sbjct: 3 SGSSGKR----KTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYAL 58
Query: 116 KKHLHTGKMKSSQNRPKYG 134
K + + + P G
Sbjct: 59 KHGQLK-WFRDNASGPSSG 76
Score = 47.4 bits (112), Expect = 1e-07
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 695 SKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 754
S S KR T+EQL +L++ F +D +++ QITGL + WF ++R
Sbjct: 3 SGSSGKR----KTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQWFGDTRYAL 58
Query: 755 KK 756
K
Sbjct: 59 KH 60
>d2d8ya2 g.39.1.3 (A:44-85) Eplin, LIMA1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 31.9 bits (73), Expect = 0.017
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 647 CEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C +LS G +A R+ CK H+ +L
Sbjct: 2 CSYCNNKLSLGT-YASLHGRIYCKPHFNQL 30
>d1x62a2 g.39.1.3 (A:8-42) PDZ and LIM domain protein 1 Elfin {Human
(Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 31.3 bits (71), Expect = 0.019
Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACF 645
C KC GI K RD H C+
Sbjct: 11 CDKCGTGIVGV--FVKLRDRHRHPECY 35
>d1x64a1 g.39.1.3 (A:8-52) PDZ and LIM domain protein 3, PDLIM3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 45
Score = 31.3 bits (71), Expect = 0.031
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 619 CSKCCRGIASSDWVRKARDHVYHLACF 645
C KC GI + V KARD H CF
Sbjct: 21 CDKCGSGIVGA--VVKARDKYRHPECF 45
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 29.6 bits (67), Expect = 0.075
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 612 FRSFGAKCSKCCRGIASSDWVRKARDHVYHLACF 645
F KC C R + + A D V+H CF
Sbjct: 4 LAMFSPKCGGCNRPVLEN--YLSAMDTVWHPECF 35
>d2cura1 g.39.1.3 (A:33-63) Four and a half LIM domains protein 1,
FHL-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 31
Score = 28.8 bits (64), Expect = 0.15
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 647 CEACKRQLSTGEEFALHEDRVLCKSHYLELV 677
C C ++L+ G+ F ED+ C Y V
Sbjct: 2 CVTCSKKLA-GQRFTAVEDQYYCVDCYKNFV 31
>d1zq1c3 d.128.1.5 (C:5-276,C:408-456) Glutamyl-tRNA(Gln)
amidotransferase subunit E, GatE {Pyrococcus abyssi
[TaxId: 29292]}
Length = 321
Score = 30.9 bits (69), Expect = 0.48
Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 16/107 (14%)
Query: 47 DHTDSESSHSKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQV 106
D S ++ + K V+ + + QL+ L+ ++ T+
Sbjct: 225 DLNVSIKGGARIEIKGVQELDMIPIIIEREVERQLNL------LKIRDELRKRGPEETRR 278
Query: 107 WFQNSRARQKKHLHTGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEE 153
+ T M+ K YPE + L I ++
Sbjct: 279 ALPDGN--------TEYMRPLPG--KARMYPETDIPPLRIPDDLKKK 315
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 27.4 bits (61), Expect = 0.53
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 647 CEACKRQLSTGEEFALHEDRVLCKSHYLEL 676
C C STG F + R C+ HY
Sbjct: 2 CGDCFTSFSTGS-FFELDGRPFCELHYHHR 30
>d1x6aa2 g.39.1.3 (A:42-75) Lim domain kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 34
Score = 25.9 bits (57), Expect = 1.9
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 645 FACEACKRQLSTGEEFALHEDRVL-CKSHYLELV 677
FAC +CK + G+ +AL + L C + E+V
Sbjct: 1 FACMSCKVIIEDGDAYALVQHATLYCGKCHNEVV 34
>d1cg5b_ a.1.1.2 (B:) Hemoglobin, beta-chain {Cartilaginous fish
akaei (Dasyatis akajei) [TaxId: 31902]}
Length = 141
Score = 27.7 bits (61), Expect = 2.6
Identities = 9/72 (12%), Positives = 18/72 (25%), Gaps = 13/72 (18%)
Query: 483 DAPSYSSQTWNTIAKRHAQEKHLKY------NTAAEDLRASFTPLVCSTDGALHLEFHSF 536
+ ++ K A + +F P H + F
Sbjct: 76 KVEINFQNLSGKHQEIGVDTQNFKLLGQTFMVELALHYKKTFRP-------KEHAAAYKF 128
Query: 537 LKRIALVLSEKW 548
+ +A LS +
Sbjct: 129 FRLVAEALSSNY 140
>d1a7ia2 g.39.1.3 (A:36-67) Cysteine-rich (intestinal) protein, CRP,
CRIP {Japanese quail (Coturnix coturnix japonica), CRP2
[TaxId: 93934]}
Length = 32
Score = 25.2 bits (55), Expect = 2.9
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 647 CEACKRQLSTGEEFALHEDRVLCKSHY 673
C C++ L + A+H+ V CKS Y
Sbjct: 2 CMVCRKNLDS-TTVAIHDAEVYCKSCY 27
>d2d6fc3 d.128.1.5 (C:1-270,C:396-444) Glutamyl-tRNA(Gln)
amidotransferase subunit E, GatE {Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 319
Score = 28.6 bits (63), Expect = 3.3
Identities = 6/33 (18%), Positives = 10/33 (30%), Gaps = 2/33 (6%)
Query: 121 TGKMKSSQNRPKYGYYPEPNKSFLVIKPQFLEE 153
T ++ Y E + I+ LE
Sbjct: 283 TQYLRPLPT--SSRMYLETDIPLFRIEDDLLEG 313
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR,
C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Length = 70
Score = 26.2 bits (58), Expect = 3.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 330 EYQEKQERILSSLPPAKQRVLTRIVEGQS 358
E Q++ E++ SSL +Q+VL + G
Sbjct: 1 ETQDQLEQLFSSLTGREQQVLQLTIRGLM 29
>d1x63a1 g.39.1.3 (A:8-44) Four and a half LIM domains protein 1,
FHL-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 25.1 bits (55), Expect = 3.4
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 611 CF-RSFGAKCSKCCRGIASSDWVRKARDHVYHLACF 645
C R KC C + I + D + + V+H CF
Sbjct: 2 CTTREDSPKCKGCFKAIVAGDQNVEYKGTVWHKDCF 37
>d2f2ab2 d.128.1.5 (B:4-293) Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B, GatB, N-terminal domain
{Staphylococcus aureus [TaxId: 1280]}
Length = 290
Score = 28.4 bits (63), Expect = 3.5
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 5/29 (17%)
Query: 130 RPK-----YGYYPEPNKSFLVIKPQFLEE 153
R K Y Y+PEP+ L I + E
Sbjct: 256 RVKEGSDDYRYFPEPDIVPLYIDDAWKER 284
>d1vhea1 b.49.3.1 (A:73-162) Hypothetical protein YsdC {Bacillus
subtilis [TaxId: 1423]}
Length = 90
Score = 26.6 bits (59), Expect = 3.6
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Query: 162 HVQIVTEKRFLGGVIGN------GDEKKNYVKEKVNQWIDC-VKKLSEAAKK 206
V IVT+K + GVIG+ E + E + +ID EA +
Sbjct: 30 RVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEW 81
>gi|148225444|ref|NP_001084009.1|(23-166:170) myosin light chain,
phosphorylatable, fast skeletal muscle [Xenopus laevis]
gi|27371289|gb|AAH41503.1| Mylpf-prov protein
[Xenopus laevis] gi|32450381|gb|AAH53808.1|
Mylpf-prov protein [Xenopus laevis]
gi|45361043|ref|NP_989158.1| myosin, light polypeptide
2, regulatory, cardiac, slow [Xenopus (Silurana)
tropicalis] gi|38494267|gb|AAH61602.1| Fast skeletal
myosin light chain 2 [Xenopus tropicalis]
gi|68342098|gb|AAY90073.1| MLC2 [Xenopus tropicalis]
gi|89272443|emb|CAJ83266.1| fast skeletal myosin light
chain 2 [Xenopus tropicalis] E=1e-68 s/c=1.81 id=86%
cov=100%
Length = 144
Score = 27.2 bits (59), Expect = 4.0
Identities = 8/23 (34%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 20 FTEEQLQVLQANFQL-DSNPDGF 41
F + Q+Q + F + D N DG
Sbjct: 1 FDQTQIQEFKEAFTVIDQNRDGI 23
Score = 26.8 bits (58), Expect = 6.1
Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Query: 67 FTEEQLQVLQANFQL-DSNPDG 87
F + Q+Q + F + D N DG
Sbjct: 1 FDQTQIQEFKEAFTVIDQNRDG 22
Score = 26.8 bits (58), Expect = 6.1
Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Query: 706 FTEEQLQVLQANFQL-DSNPDG 726
F + Q+Q + F + D N DG
Sbjct: 1 FDQTQIQEFKEAFTVIDQNRDG 22
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 165
Score = 27.0 bits (58), Expect = 5.6
Identities = 6/25 (24%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 18 TTFTEEQLQVLQANFQ-LDSNPDGF 41
+ F ++++ L F+ LD + G
Sbjct: 8 SHFDADEIKRLGKRFKKLDLDNSGS 32
Score = 27.0 bits (58), Expect = 5.9
Identities = 6/25 (24%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 65 TTFTEEQLQVLQANFQ-LDSNPDGQ 88
+ F ++++ L F+ LD + G
Sbjct: 8 SHFDADEIKRLGKRFKKLDLDNSGS 32
Score = 27.0 bits (58), Expect = 5.9
Identities = 6/25 (24%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 704 TTFTEEQLQVLQANFQ-LDSNPDGQ 727
+ F ++++ L F+ LD + G
Sbjct: 8 SHFDADEIKRLGKRFKKLDLDNSGS 32
>d2oqma1 a.213.1.3 (A:1-171) Hypothetical protein Sden0562
{Shewanella denitrificans [TaxId: 192073]}
Length = 171
Score = 26.8 bits (59), Expect = 7.5
Identities = 9/83 (10%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Query: 209 QAAFSVVTKSLQCEWAFLQRVVNHCQDEYIPLREIIHSTLVPSIFE---HEISSSEHELF 265
+K L+ A + + + + + +++S L F + +
Sbjct: 4 DLTVVQFSKMLKNLNAIFDKAEAFAELKKVDMDVLLNSRLAADQFNLIRQVQIACDTAKV 63
Query: 266 HLPTRFGGLGINDPVETAQHAFA 288
+ G L + ++ A
Sbjct: 64 GVARLTGQLETAPKHDDSETTLA 86
>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase
{Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}
Length = 163
Score = 26.4 bits (58), Expect = 9.6
Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 17/103 (16%)
Query: 600 ILLKGRLSVLICFRSFGAKCSKCCRGIASSDWVRKARDHVYHLACFACEACKR--QLSTG 657
L+ G++ V+ + G C+ +G+ + ++ + D + A +A + T
Sbjct: 19 FLISGKIVVICGYGDVGKGCASSMKGLGARVYITE-IDPI-----CAIQAVMEGFNVVTL 72
Query: 658 EEFALHED---------RVLCKSHYLELVDGGTTSSDDGADSE 691
+E D V+ H L++ + + D E
Sbjct: 73 DEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDE 115
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.131 0.388
Gapped
Lambda K H
0.267 0.0654 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,790,335
Number of extensions: 130687
Number of successful extensions: 417
Number of sequences better than 10.0: 1
Number of HSP's gapped: 400
Number of HSP's successfully gapped: 122
Length of query: 768
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 676
Effective length of database: 1,144,436
Effective search space: 773638736
Effective search space used: 773638736
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (25.9 bits)