Query psy1726
Match_columns 137
No_of_seqs 120 out of 876
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 17:25:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1726.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1726hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gc0_A D-xylose-proton symport 96.7 0.0031 1.1E-07 50.9 6.3 64 46-135 278-343 (491)
2 3o7q_A L-fucose-proton symport 95.1 0.053 1.8E-06 42.7 6.7 74 28-135 249-326 (438)
3 3o7q_A L-fucose-proton symport 94.5 0.085 2.9E-06 41.5 6.4 68 42-135 23-92 (438)
4 4aps_A DI-OR tripeptide H+ sym 93.9 0.1 3.6E-06 41.9 6.0 69 46-135 14-86 (491)
5 2xut_A Proton/peptide symporte 93.0 0.12 3.9E-06 42.1 4.9 73 43-135 10-86 (524)
6 1pw4_A Glycerol-3-phosphate tr 92.9 0.39 1.3E-05 37.7 7.7 62 48-135 255-321 (451)
7 1pw4_A Glycerol-3-phosphate tr 92.8 0.25 8.7E-06 38.8 6.6 62 47-135 30-93 (451)
8 2cfq_A Lactose permease; trans 92.3 0.45 1.6E-05 37.9 7.5 26 110-135 48-74 (417)
9 2gfp_A EMRD, multidrug resista 91.9 0.6 2.1E-05 36.0 7.5 27 110-136 40-67 (375)
10 2cfq_A Lactose permease; trans 89.1 0.8 2.7E-05 36.5 6.1 25 111-135 265-290 (417)
11 4gc0_A D-xylose-proton symport 80.6 0.7 2.4E-05 36.9 2.0 22 114-135 64-86 (491)
12 2gfp_A EMRD, multidrug resista 78.9 1.4 4.8E-05 33.8 3.2 22 52-73 207-228 (375)
13 4aps_A DI-OR tripeptide H+ sym 62.5 6.6 0.00023 31.2 3.7 23 113-135 327-350 (491)
No 1
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=96.68 E-value=0.0031 Score=50.92 Aligned_cols=64 Identities=5% Similarity=-0.017 Sum_probs=48.7
Q ss_pred HHHHHH-HHHhhhHHHHHHHHhHHHHhhhccCccCCCccccccCCCCCCCccccccccCChhhHHHHHHHHHHHHHHHHH
Q psy1726 46 KAVFLF-HRTVCAFCYYGVVLMTTELFEASDTRCSESPIAAASGMFKPVDTCTADCRQLNTQDYMDLLWTTLAEFPGNYY 124 (137)
Q Consensus 46 ~Tl~l~-iwf~~~~~YyGl~lw~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~l~~~~y~~~~i~~l~eipG~il 124 (137)
..+.++ .++....+++.+..+.|.++...+. .....+...++.++..+++.++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~ 331 (491)
T 4gc0_A 278 IVIGVMLSIFQQFVGINVVLYYAPEVFKTLGA--------------------------STDIALLQTIIVGVINLTFTVL 331 (491)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSSC--------------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHhcchHHHHhcCC--------------------------CccchhhHHHHHHHHHHHHHHH
Confidence 344455 6777777888888999988765432 1234466778889999999999
Q ss_pred -HHHHHHhcCCC
Q psy1726 125 -VFIRNRATYIS 135 (137)
Q Consensus 125 -~llidriGRK~ 135 (137)
.+++||+|||+
T Consensus 332 ~~~l~dr~Grr~ 343 (491)
T 4gc0_A 332 AIMTVDKFGRKP 343 (491)
T ss_dssp HHHHHHHHCSHH
T ss_pred HHHHHHhhcCcc
Confidence 99999999996
No 2
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=95.09 E-value=0.053 Score=42.71 Aligned_cols=74 Identities=9% Similarity=-0.048 Sum_probs=47.9
Q ss_pred cchhhhccccccchhHHHHHHHHH-HHHhhhHHHHHHHHhHHHH-hhhc-cCccCCCccccccCCCCCCCccccccccCC
Q psy1726 28 TGVKGLFTTFQSYPSRINKAVFLF-HRTVCAFCYYGVVLMTTEL-FEAS-DTRCSESPIAAASGMFKPVDTCTADCRQLN 104 (137)
Q Consensus 28 ~~i~~LF~~~~~~~~~r~~Tl~l~-iwf~~~~~YyGl~lw~P~L-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~c~~l~ 104 (137)
.+++++++ ++.++ .+. ..+...+.++++..|+|.+ ++.. +. ..
T Consensus 249 ~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--------------------------~~ 294 (438)
T 3o7q_A 249 ASLSRLAR----IRHWR----WAVLAQFCYVGAQTACWSYLIRYAVEEIPGM--------------------------TA 294 (438)
T ss_dssp HHHHHHTT----CSHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC--------------------------CH
T ss_pred hhHHHHHh----ChHHH----HHHHHHHHHHHHHHHHHHHHHHHhhhccCCc--------------------------ch
Confidence 35677773 33332 233 4556667788889999998 6543 21 01
Q ss_pred hhhHHHHHHHHHHHHHHHHH-HHHHHHhcCCC
Q psy1726 105 TQDYMDLLWTTLAEFPGNYY-VFIRNRATYIS 135 (137)
Q Consensus 105 ~~~y~~~~i~~l~eipG~il-~llidriGRK~ 135 (137)
...-....+..++.++|.++ .++.||+|||+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 326 (438)
T 3o7q_A 295 GFAANYLTGTMVCFFIGRFTGTWLISRFAPHK 326 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 11223344567888999999 99999999985
No 3
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=94.45 E-value=0.085 Score=41.52 Aligned_cols=68 Identities=13% Similarity=-0.074 Sum_probs=44.6
Q ss_pred hHHHHHHHHH-HHHhhhHHHHHHHHhHHHHhhhccCccCCCccccccCCCCCCCccccccccCChhhHHHHHHHHHHHHH
Q psy1726 42 SRINKAVFLF-HRTVCAFCYYGVVLMTTELFEASDTRCSESPIAAASGMFKPVDTCTADCRQLNTQDYMDLLWTTLAEFP 120 (137)
Q Consensus 42 ~~r~~Tl~l~-iwf~~~~~YyGl~lw~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~l~~~~y~~~~i~~l~eip 120 (137)
+.++..+.++ ..+...+.++.+...+|.+.+..+. .....-+...+..++.+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--------------------------s~~~~g~~~~~~~~~~~i 76 (438)
T 3o7q_A 23 SYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTL--------------------------TNFQAGLIQSAFYFGYFI 76 (438)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--------------------------CSHHHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC--------------------------CHHHHHHHHHHHHHHHHH
Confidence 3445555566 7777777777777778876554332 012223334456677777
Q ss_pred HHHH-HHHHHHhcCCC
Q psy1726 121 GNYY-VFIRNRATYIS 135 (137)
Q Consensus 121 G~il-~llidriGRK~ 135 (137)
+.++ +.+.||+|||+
T Consensus 77 ~~~~~G~l~dr~g~r~ 92 (438)
T 3o7q_A 77 IPIPAGILMKKLSYKA 92 (438)
T ss_dssp THHHHHHHHHHSCHHH
T ss_pred HHHhHHHHHHHhcchH
Confidence 8888 99999999986
No 4
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=93.87 E-value=0.1 Score=41.93 Aligned_cols=69 Identities=12% Similarity=0.060 Sum_probs=45.3
Q ss_pred HHHHHH-HHHhhhHHHHHHHHhHHHHhhhccCccCCCccccccCCCCCCCccccccccCC-hhhHHHHHHHHHHHHHHHH
Q psy1726 46 KAVFLF-HRTVCAFCYYGVVLMTTELFEASDTRCSESPIAAASGMFKPVDTCTADCRQLN-TQDYMDLLWTTLAEFPGNY 123 (137)
Q Consensus 46 ~Tl~l~-iwf~~~~~YyGl~lw~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~l~-~~~y~~~~i~~l~eipG~i 123 (137)
....++ ..+...+.||++..++|..+...... .+ - ..+ ...-....+..++.+.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~---------~~s~~~~~~~~~~~~~~~~~~~~ 72 (491)
T 4aps_A 14 GLSTLFMTEMWERFSYYGMRAILLYYMWFLIST--------GD----L---------HITRATAASIMAIYASMVYLSGT 72 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------TS----C---------CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch--------hh----c---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 444556 78888899999999999877653000 00 0 011 1222334456778888888
Q ss_pred H-HHHHHH-hcCCC
Q psy1726 124 Y-VFIRNR-ATYIS 135 (137)
Q Consensus 124 l-~llidr-iGRK~ 135 (137)
+ +.+.|| +|||+
T Consensus 73 ~~g~l~dr~~g~r~ 86 (491)
T 4aps_A 73 IGGFVADRIIGARP 86 (491)
T ss_dssp HHHHHHHHTSCHHH
T ss_pred HHHHHHhccccchH
Confidence 8 999999 89986
No 5
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}
Probab=92.98 E-value=0.12 Score=42.13 Aligned_cols=73 Identities=11% Similarity=0.097 Sum_probs=44.3
Q ss_pred HHHHHHHHH-HHHhhhHHHHHHHHhHHHHhhhccCccCCCccccccCCCCCCCccccccccCC-hhhHHHHHHHHHHHHH
Q psy1726 43 RINKAVFLF-HRTVCAFCYYGVVLMTTELFEASDTRCSESPIAAASGMFKPVDTCTADCRQLN-TQDYMDLLWTTLAEFP 120 (137)
Q Consensus 43 ~r~~Tl~l~-iwf~~~~~YyGl~lw~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~l~-~~~y~~~~i~~l~eip 120 (137)
+.+....++ ..+...+++|++..++|..+.+.-... ... ..+ ...-....+..++.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~------------~~~--------~~s~~~~g~~~~~~~~~~~~ 69 (524)
T 2xut_A 10 WPRQIPYIIASEACERFSFYGMRNILTPFLMTALLLS------------IPE--------ELRGAVAKDVFHSFVIGVYF 69 (524)
T ss_dssp ---CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSC------------CSS--------STTTTTHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------------ccc--------ccCHHHHHHHHHHHHHHHHH
Confidence 344445566 788888999999999998775421100 000 001 1112233445677778
Q ss_pred HHHH-HHHHHHh-cCCC
Q psy1726 121 GNYY-VFIRNRA-TYIS 135 (137)
Q Consensus 121 G~il-~llidri-GRK~ 135 (137)
+.++ +.+.||+ |||+
T Consensus 70 ~~~~~G~l~dr~~g~r~ 86 (524)
T 2xut_A 70 FPLLGGWIADRFFGKYN 86 (524)
T ss_dssp THHHHHHHHTTSSCSHH
T ss_pred HHHHHHHHHHHHhcchH
Confidence 8888 9999999 9985
No 6
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=92.86 E-value=0.39 Score=37.73 Aligned_cols=62 Identities=8% Similarity=0.196 Sum_probs=43.7
Q ss_pred HHHH-HHHhhhHHHHHHHHhHHHHhhhccCccCCCccccccCCCCCCCccccccccCCh-hhHHHHHHHHHHHHHHHHH-
Q psy1726 48 VFLF-HRTVCAFCYYGVVLMTTELFEASDTRCSESPIAAASGMFKPVDTCTADCRQLNT-QDYMDLLWTTLAEFPGNYY- 124 (137)
Q Consensus 48 l~l~-iwf~~~~~YyGl~lw~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~l~~-~~y~~~~i~~l~eipG~il- 124 (137)
+.+. ..+...++++++..|+|.++..... .+. ..-....+.+++.++|.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 308 (451)
T 1pw4_A 255 WYIAIANVFVYLLRYGILDWSPTYLKEVKH--------------------------FALDKSSWAYFLYEYAGIPGTLLC 308 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHBTTBSC--------------------------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------------------CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 6777788889999999988764211 111 1233455667889999999
Q ss_pred HHHHHHh--cCCC
Q psy1726 125 VFIRNRA--TYIS 135 (137)
Q Consensus 125 ~llidri--GRK~ 135 (137)
..+.||+ |||+
T Consensus 309 g~l~~~~~~~~~~ 321 (451)
T 1pw4_A 309 GWMSDKVFRGNRG 321 (451)
T ss_dssp HHHHHHTSTTCHH
T ss_pred HHHHHHHhcCCch
Confidence 9999999 8874
No 7
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=92.83 E-value=0.25 Score=38.80 Aligned_cols=62 Identities=11% Similarity=-0.030 Sum_probs=38.4
Q ss_pred HHHHH-HHHhhhHHHHHHHHhHHHHhhhccCccCCCccccccCCCCCCCccccccccCChhhHHHHHHHHHHHHHHHHH-
Q psy1726 47 AVFLF-HRTVCAFCYYGVVLMTTELFEASDTRCSESPIAAASGMFKPVDTCTADCRQLNTQDYMDLLWTTLAEFPGNYY- 124 (137)
Q Consensus 47 Tl~l~-iwf~~~~~YyGl~lw~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~l~~~~y~~~~i~~l~eipG~il- 124 (137)
.+.++ ..+...+..+.+...+|.+.+.. . + ....=+...+..++.+.+.++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------s-----------~~~~g~~~~~~~~~~~~~~~~~ 82 (451)
T 1pw4_A 30 FLGIFFGYAAYYLVRKNFALAMPYLVEQG-F---------------S-----------RGDLGFALSGISIAYGFSKFIM 82 (451)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHTTSST-T---------------C-----------SSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c---------------c-----------HhHHHHHHHHHHHHHHHHHHhH
Confidence 33444 56666666666777778665432 1 0 111122334566777888888
Q ss_pred HHHHHHhcCCC
Q psy1726 125 VFIRNRATYIS 135 (137)
Q Consensus 125 ~llidriGRK~ 135 (137)
+.+.||+|||+
T Consensus 83 G~l~dr~g~r~ 93 (451)
T 1pw4_A 83 GSVSDRSNPRV 93 (451)
T ss_dssp HHHHHHSCHHH
T ss_pred HHHHHhcCchH
Confidence 99999999986
No 8
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=92.30 E-value=0.45 Score=37.91 Aligned_cols=26 Identities=4% Similarity=-0.127 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHhcCCC
Q psy1726 110 DLLWTTLAEFPGNYY-VFIRNRATYIS 135 (137)
Q Consensus 110 ~~~i~~l~eipG~il-~llidriGRK~ 135 (137)
...+..++.+.+.++ +.+.||+|||+
T Consensus 48 ~~~~~~~~~~i~~~~~G~lsDr~Grr~ 74 (417)
T 2cfq_A 48 IFAAISLFSLLFQPLFGLLSDKLGLRK 74 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 344556788888899 99999999997
No 9
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=91.87 E-value=0.6 Score=35.98 Aligned_cols=27 Identities=11% Similarity=-0.156 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHhcCCCC
Q psy1726 110 DLLWTTLAEFPGNYY-VFIRNRATYISQ 136 (137)
Q Consensus 110 ~~~i~~l~eipG~il-~llidriGRK~~ 136 (137)
...+..++.+.+.++ +.+.||+|||+.
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 67 (375)
T 2gfp_A 40 VMGAYLLTYGVSQLFYGPISDRVGRRPV 67 (375)
T ss_dssp HHHHHHHHHHHHHTTHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 344556777788888 999999999975
No 10
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*
Probab=89.13 E-value=0.8 Score=36.46 Aligned_cols=25 Identities=16% Similarity=0.052 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHH-HHHHHHhcCCC
Q psy1726 111 LLWTTLAEFPGNYY-VFIRNRATYIS 135 (137)
Q Consensus 111 ~~i~~l~eipG~il-~llidriGRK~ 135 (137)
..+..+++++|.++ ..+.||+|||+
T Consensus 265 ~~~~~~~~~~~~~~~g~l~dr~g~~~ 290 (417)
T 2cfq_A 265 TTMGELLNASIMFFAPLIINRIGGKN 290 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcHHH
Confidence 34556788899999 99999999985
No 11
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*
Probab=80.58 E-value=0.7 Score=36.92 Aligned_cols=22 Identities=14% Similarity=0.073 Sum_probs=19.1
Q ss_pred HHHHHHHHHHH-HHHHHHhcCCC
Q psy1726 114 TTLAEFPGNYY-VFIRNRATYIS 135 (137)
Q Consensus 114 ~~l~eipG~il-~llidriGRK~ 135 (137)
..++.+.|.++ +.+.||+|||+
T Consensus 64 ~~~G~~iG~~~~G~laDr~GRk~ 86 (491)
T 4gc0_A 64 ALIGCIIGGALGGYCSNRFGRRD 86 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCHH
Confidence 35677889999 99999999996
No 12
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}
Probab=78.95 E-value=1.4 Score=33.84 Aligned_cols=22 Identities=9% Similarity=-0.232 Sum_probs=16.4
Q ss_pred HHHhhhHHHHHHHHhHHHHhhh
Q psy1726 52 HRTVCAFCYYGVVLMTTELFEA 73 (137)
Q Consensus 52 iwf~~~~~YyGl~lw~P~L~~~ 73 (137)
..+...+.++++..|+|.+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~ 228 (375)
T 2gfp_A 207 MLIGGLAGIAAFEACSGVLMGA 228 (375)
T ss_dssp HHHHHHHHHHHHHHHCSCSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677888888899976654
No 13
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=62.48 E-value=6.6 Score=31.17 Aligned_cols=23 Identities=4% Similarity=-0.094 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHH-HHHHHHhcCCC
Q psy1726 113 WTTLAEFPGNYY-VFIRNRATYIS 135 (137)
Q Consensus 113 i~~l~eipG~il-~llidriGRK~ 135 (137)
+.+++.+.+.++ ..+.||+|||.
T Consensus 327 ~~~~~~~~~~~~~~~l~~r~~~r~ 350 (491)
T 4aps_A 327 LNPLFIMLYTPFFAWLWTAWKKNQ 350 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred cchHHHHHHHHHHHHHHHHHhccC
Confidence 446667777777 88999999985
Done!