BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17263
(188 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 251 bits (640), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/195 (66%), Positives = 156/195 (80%), Gaps = 9/195 (4%)
Query: 1 MGNRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIPELAIN 59
MG+R+S LLR+EE+ +I++ET + +QI RLYSRFTSLD+G+ GTLSREDF RIPELAIN
Sbjct: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN 60
Query: 60 PLGDRIVHVFFEEGCSDRVNFRQFMQVLARFRPIKKSKENK-------LNSREQKLKFAF 112
PLGDRI++ FF EG D+VNFR FM+ LA FRPI+ ++++K LNSR KL FAF
Sbjct: 61 PLGDRIINAFFSEG-EDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAF 119
Query: 113 KMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 172
++YDLD DD ISRDELL VL MMVG NIS+EQL SIA+RTI EADQ+GD ISF EF K
Sbjct: 120 RLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV 179
Query: 173 LERTDVEQKMSIRFL 187
LE+ DVEQKMSIRFL
Sbjct: 180 LEKVDVEQKMSIRFL 194
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 248 bits (632), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/195 (66%), Positives = 156/195 (80%), Gaps = 9/195 (4%)
Query: 1 MGNRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIPELAIN 59
MG+R+S LLR+EE+ +I++ET + +QI RLYSRFTSLD+G+ GTLSREDF RIPELAIN
Sbjct: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN 60
Query: 60 PLGDRIVHVFFEEGCSDRVNFRQFMQVLARFRPIKKSKENK-------LNSREQKLKFAF 112
PLGDRI++ FF EG D+VNFR FM+ LA FRPI+ ++++K LNSR KL FAF
Sbjct: 61 PLGDRIINAFFPEG-EDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAF 119
Query: 113 KMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 172
++YDLD D+ ISRDELL VL MMVG NIS+EQL SIA+RTI EADQ+GD ISF EF K
Sbjct: 120 RLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV 179
Query: 173 LERTDVEQKMSIRFL 187
LE+ DVEQKMSIRFL
Sbjct: 180 LEKVDVEQKMSIRFL 194
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 176 bits (445), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 129/196 (65%), Gaps = 10/196 (5%)
Query: 1 MGNRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIPELAIN 59
MG+RSS + I+ ET + + RL+ RF +LDR G LSR D +I LA+N
Sbjct: 1 MGSRSSHAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVN 60
Query: 60 PLGDRIVHVFFEEGCSDRVNFRQFMQVLARFRPIK--------KSKENKLNSREQKLKFA 111
PLGDRI+ FF +G S RV+F F++VLA FRP++ K LNSR KL +A
Sbjct: 61 PLGDRIIESFFPDG-SQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYA 119
Query: 112 FKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 171
F++YDLD D ISR E+L VL +MVG ++EEQL +IA+RT+ EAD++GD +SF EF K
Sbjct: 120 FQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTK 179
Query: 172 ALERTDVEQKMSIRFL 187
+LE+ DVEQKMSIR L
Sbjct: 180 SLEKMDVEQKMSIRIL 195
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 129 bits (324), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 105/161 (65%), Gaps = 9/161 (5%)
Query: 24 PNQIERLYSRFTSLDRGDCGTLSREDFLRIPELAINPLGDRIVHVFFEEGCSDRVNFRQF 83
++I+RL RF LD + G+LS E+F+ +PEL NPL R++ +F +G + V+F++F
Sbjct: 3 ADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGE-VDFKEF 61
Query: 84 MQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEE 143
++ +++F +K KE QKL+FAF++YD+D D IS EL VL MMVG N+ +
Sbjct: 62 IEGVSQF-SVKGDKE-------QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDT 113
Query: 144 QLTSIAERTILEADQNGDQMISFDEFCKALERTDVEQKMSI 184
QL I ++TI+ AD++GD ISF+EFC + D+ +KM +
Sbjct: 114 QLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVV 154
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 129 bits (324), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 105/161 (65%), Gaps = 9/161 (5%)
Query: 24 PNQIERLYSRFTSLDRGDCGTLSREDFLRIPELAINPLGDRIVHVFFEEGCSDRVNFRQF 83
++I+RL RF LD + G+LS E+F+ +PEL NPL R++ +F +G + V+F++F
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGE-VDFKEF 60
Query: 84 MQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEE 143
++ +++F +K KE QKL+FAF++YD+D D IS EL VL MMVG N+ +
Sbjct: 61 IEGVSQF-SVKGDKE-------QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDT 112
Query: 144 QLTSIAERTILEADQNGDQMISFDEFCKALERTDVEQKMSI 184
QL I ++TI+ AD++GD ISF+EFC + D+ +KM +
Sbjct: 113 QLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVV 153
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 105/160 (65%), Gaps = 9/160 (5%)
Query: 25 NQIERLYSRFTSLDRGDCGTLSREDFLRIPELAINPLGDRIVHVFFEEGCSDRVNFRQFM 84
++I+RL RF LD + G+LS E+F+ +PEL NPL R++ +F +G + V+F++F+
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDG-NGEVDFKEFI 75
Query: 85 QVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQ 144
+ +++F +K KE QKL+FAF++YD+D D IS EL VL MMVG N+ + Q
Sbjct: 76 EGVSQF-SVKGDKE-------QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQ 127
Query: 145 LTSIAERTILEADQNGDQMISFDEFCKALERTDVEQKMSI 184
L I ++TI+ AD++GD ISF+EFC + D+ +KM +
Sbjct: 128 LQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVV 167
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 105/160 (65%), Gaps = 9/160 (5%)
Query: 25 NQIERLYSRFTSLDRGDCGTLSREDFLRIPELAINPLGDRIVHVFFEEGCSDRVNFRQFM 84
++I+RL RF LD + G+LS E+F+ +PEL NPL R++ +F +G + V+F++F+
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDG-NGEVDFKEFI 76
Query: 85 QVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQ 144
+ +++F +K KE QKL+FAF++YD+D D IS EL VL MMVG N+ + Q
Sbjct: 77 EGVSQF-SVKGDKE-------QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQ 128
Query: 145 LTSIAERTILEADQNGDQMISFDEFCKALERTDVEQKMSI 184
L I ++TI+ AD++GD ISF+EFC + D+ +KM +
Sbjct: 129 LQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMVV 168
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 36/187 (19%)
Query: 1 MGNRSSLLLREEEIAQIQEETV-TPNQIERLYSRFTSLDRGDC--GTLSREDFLRIPELA 57
MG +S+ L+ E + ++ +T T ++++ Y F DC G L F +I +
Sbjct: 1 MG-KSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIK----DCPSGQLDAAGFQKIYK-Q 54
Query: 58 INPLGD-----RIVHVFFEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSR---EQKLK 109
P GD V F+E R+ F +F+Q L+ + SR ++KL+
Sbjct: 55 FFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALS------------VTSRGTLDEKLR 102
Query: 110 FAFKMYDLDNDDAISRDELLAV---LHMMVGANI--SEEQLTS--IAERTILEADQNGDQ 162
+AFK+YDLDND I+R+E+L + ++ MVG + EE+ T +R D+N D
Sbjct: 103 WAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADG 162
Query: 163 MISFDEF 169
++ EF
Sbjct: 163 KLTLQEF 169
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 28/183 (15%)
Query: 1 MGNRSSLLLREEEIAQIQEETVTPNQIERLYSRFTSLDRGDC--GTLSREDFLRIPELAI 58
MG ++S L +++ Q +I++ + F DC G L+REDF++I +
Sbjct: 1 MGAKTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLR----DCPSGQLAREDFVKIYK-QF 55
Query: 59 NPLG---DRIVHVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFK 113
P G D H+F F++ + ++F +F+ VL+ + E+KL +AF+
Sbjct: 56 FPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLST---------TSRGTLEEKLSWAFE 106
Query: 114 MYDLDNDDAISRDELLAV---LHMMVGANIS---EEQLTSIAERTILE-ADQNGDQMISF 166
+YDL++D I+ DE+L + ++ M+G+ ++ +E + + I + D+N D I+
Sbjct: 107 LYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITL 166
Query: 167 DEF 169
DEF
Sbjct: 167 DEF 169
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 30/187 (16%)
Query: 1 MGNRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDC--GTLSREDFLRIPELA 57
MG ++S L R E + + E T T ++I+ Y F DC G LS E+F +I
Sbjct: 1 MGKQNSKL-RPEVMQDLLESTDFTEHEIQEWYKGFLR----DCPSGHLSMEEFKKIYG-N 54
Query: 58 INPLGDR---IVHVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAF 112
P GD HVF F+ ++FR+F+ L+ + KL EQKLK+AF
Sbjct: 55 FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSV------TSRGKL---EQKLKWAF 105
Query: 113 KMYDLDNDDAISRDELLAV---LHMMVGA--NISEEQLTS--IAERTILEADQNGDQMIS 165
MYDLD + IS+ E+L + ++ MV + + E++ T E+ + D N D +S
Sbjct: 106 SMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLS 165
Query: 166 FDEFCKA 172
+EF +
Sbjct: 166 LEEFIRG 172
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 48 EDFLRIPELAINPLGDRIVHVFFEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQK 107
E L +PEL NP +RI VF D ++F F+ +L+ F + + + K
Sbjct: 48 EQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVF--------SDTATPDIK 99
Query: 108 LKFAFKMYDLDNDDAISRDELLAVLHMMVG----ANISEEQLTSIAERTILEADQNGDQM 163
+AF+++D D+D ++R++L +++ + G +S ++ + + + E+D + D
Sbjct: 100 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 159
Query: 164 ISFDEFCKALERT 176
I+ EF + R+
Sbjct: 160 INLSEFQHVISRS 172
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 48 EDFLRIPELAINPLGDRIVHVFFEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQK 107
E L +PEL NP +RI VF D ++F F+ +L+ F + + + K
Sbjct: 79 EQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVF--------SDTATPDIK 130
Query: 108 LKFAFKMYDLDNDDAISRDELLAVLHMMVG----ANISEEQLTSIAERTILEADQNGDQM 163
+AF+++D D+D ++R++L +++ + G +S ++ + + + E+D + D
Sbjct: 131 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 190
Query: 164 ISFDEFCKALERT 176
I+ EF + R+
Sbjct: 191 INLSEFQHVISRS 203
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 20 ETVTPNQIERLYSRFTSLDRGDC--GTLSREDFLRIPELA-INPLGDRIVHVFFEEGCSD 76
E ++ + + Y +F + +C G L+ +F + L ++P ++ V FE +
Sbjct: 9 EELSATECHQWYKKFMT----ECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFN 64
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
+ + FM+ +A + K K +QKL++ FK+YD+D + I R ELL ++ +
Sbjct: 65 KDGYIDFMEYVAALSLVLKGK------VDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIR 118
Query: 137 GANISEEQLTS--IAERTILEADQNGDQMISFDEFCKALERTDV 178
N E +T+ + D NGD +S +EF + +++ +V
Sbjct: 119 AINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEV 162
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 30/165 (18%)
Query: 21 TVTP---NQIERLYSRFTSLDRG--DCGTLSREDFLRIPELAI-------NPLGDRIVHV 68
+VTP ++E LY F L D G + +E+F +LA+ N DRI V
Sbjct: 27 SVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEF----QLALFRNRNRRNLFADRIFDV 82
Query: 69 FFEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDEL 128
F + + + F +F++ L F P E K+KFAFK+YDL I R+EL
Sbjct: 83 F-DVKRNGVIEFGEFVRSLGVFHPSAPVHE--------KVKFAFKLYDLRQTGFIEREEL 133
Query: 129 ----LAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 169
+A+LH +SE+ + + ++ ++AD+ D I DE+
Sbjct: 134 KEMVVALLHESELV-LSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 30/165 (18%)
Query: 21 TVTP---NQIERLYSRFTSLDRG--DCGTLSREDFLRIPELAI-------NPLGDRIVHV 68
+VTP ++E LY F L D G + +E+F +LA+ N DRI V
Sbjct: 27 SVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEF----QLALFRNRNRRNLFADRIFDV 82
Query: 69 FFEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDEL 128
F + + + F +F++ L F P E K+KFAFK+YDL I R+EL
Sbjct: 83 F-DVKRNGVIEFGEFVRSLGVFHPSAPVHE--------KVKFAFKLYDLRQTGFIEREEL 133
Query: 129 ----LAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 169
+A+LH +SE+ + + ++ ++AD+ D I DE+
Sbjct: 134 KEMVVALLHES-ELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 26 QIERLYSRFTSLDRGDCGTLSREDFLRIPELAINPLGDRIVHVFFEEGCSDRVNFRQFMQ 85
Q++ Y +F L+ GTL +F R ++ N + V F ++ N F++
Sbjct: 23 QLQEWYKKF--LEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLE 80
Query: 86 VLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAV------LHMMVGAN 139
+A + + + E KLK+ FK+YD D + I R ELL + L
Sbjct: 81 YVAALNLVLRG------TLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVE 134
Query: 140 ISEEQ----LTS--IAERTILEADQNGDQMISFDEFCKALERTDVEQKM 182
+ EQ LT + +R L D+NGD +S +EF + R KM
Sbjct: 135 VEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKM 183
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 28/164 (17%)
Query: 26 QIERLYSRFTSLDRGDC--GTLSREDFLRIPELAINPLGDRIV---HVF--FEEGCSDRV 78
++++ Y F DC G L++ +F +I + P GD +VF F+ + +
Sbjct: 26 ELQQWYKGFFK----DCPSGHLNKSEFQKIYK-QFFPFGDPSAFAEYVFNVFDADKNGYI 80
Query: 79 NFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAV---LHMM 135
+F++F+ L+ + +LN KL +AF++YDLDN+ IS DE+L + ++ M
Sbjct: 81 DFKEFICALSV------TSRGELND---KLIWAFQLYDLDNNGLISYDEMLRIVDAIYKM 131
Query: 136 VGANISEEQLTSIAERTILE----ADQNGDQMISFDEFCKALER 175
VG+ + + E+ + + D+N D ++ +EFC+ +R
Sbjct: 132 VGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 5 SSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGT-LSREDFLRIPELAINPLG 62
S++ + E + Q+Q +T T +++ LY F + +C T L ED ++ P G
Sbjct: 70 STVRHQPEGLDQLQAQTKFTKKELQSLYRGF----KNECPTGLVDEDTFKLIYSQFFPQG 125
Query: 63 DRIVHVFF-----EEGCSDRVNFRQF---MQVLARFRPIKKSKENKLNSREQKLKFAFKM 114
D + F + + ++F F + +L R + +KLK+AF +
Sbjct: 126 DATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLR------------GTVHEKLKWAFNL 173
Query: 115 YDLDNDDAISRDELLAVL---HMMVGAN----ISEEQLTSIAERTILEADQNGDQMISFD 167
YD++ D I+++E+LA++ + M+G + + E+ ER + D+N D +++ D
Sbjct: 174 YDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTID 233
Query: 168 EFCKALER 175
EF + ++
Sbjct: 234 EFLETCQK 241
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTL-SREDFLRIPELAINP----LGDRIVHVFFEEGCSD 76
+T QI F D+ G + +RE + L NP L D I E +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEA--ENNNNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++NF +F ++A K+ + E++++ AFK++D D D IS EL V+ + +
Sbjct: 62 QLNFTEFCGIMA--------KQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVM-INL 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFC 170
G +++E++ + I EAD +GD MI+++EF
Sbjct: 113 GEKVTDEEIDEM----IREADFDGDGMINYEEFV 142
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF +D + I+ EL L +G N +E +L + I EA+ N + ++F
Sbjct: 11 EFKDAFVQFDKEGTGKIATREL-GTLMRTLGQNPTEAELQDL----IAEAENNNNGQLNF 65
Query: 167 DEFC----KALERTDVEQKMSIRF 186
EFC K + TD E++M F
Sbjct: 66 TEFCGIMAKQMRETDTEEEMREAF 89
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDR-GDCGTLSREDFLRIPELAINP----LGDRIVHVFFEEGCSD 76
+T +QI F+ D+ GD ++E + L NP L D I V + +
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++LK AF+++D D + IS EL V+
Sbjct: 63 TIDFPEFLNLMAR--------KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM---- 110
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD I++DEF K +
Sbjct: 111 -TNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTL-SREDFLRIPELAINPLGDRIVHVFFE--EGCSDRV 78
+T Q + + F D GT+ ++E + + L P + I + E + S +
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 79 NFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGA 138
+F +F+ ++ +K + +SRE+ LK AF+++D DN I+ +L V + G
Sbjct: 82 DFEEFLTMMT-------AKMGERDSREEILK-AFRLFDDDNSGTITIKDLRRVAKEL-GE 132
Query: 139 NISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 176
N++EE+L + I EAD+N D I DEF + +++T
Sbjct: 133 NLTEEELQEM----IAEADRNDDNEIDEDEFIRIMKKT 166
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E+KLK AF+++D D + IS EL V+
Sbjct: 62 TIDFPEFLNLMAR--------KMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVM---- 109
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 110 -TNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDR-GDCGTLSREDFLRIPELAINP----LGDRIVHVFFEEGCSD 76
+T +QI F+ D+ GD ++E + L NP L D I V + +
Sbjct: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++LK AF+++D D + IS EL V+
Sbjct: 63 TIDFPEFLNLMAR--------KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM---- 110
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD I+++EF K +
Sbjct: 111 -TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 20 ETVTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGC 74
E +T QI F D+ GT++ ++ + L NP L D I V +
Sbjct: 2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADG 59
Query: 75 SDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHM 134
+ ++F +F+ ++AR K KE E++L AFK++D D + IS EL V+
Sbjct: 60 NGTIDFPEFLSLMAR-----KMKEQ---DSEEELIEAFKVFDRDGNGLISAAELRHVM-- 109
Query: 135 MVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD I+++EF + +
Sbjct: 110 ---TNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 58
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++LK AF+++D D + IS EL V+
Sbjct: 59 TIDFPEFLNLMAR--------KMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVM---- 106
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 107 -TNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVM 142
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++LK AF+++D D + IS EL V+ +
Sbjct: 62 TIDFPEFLNLMAR--------KMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 113 GEKLTDEEVDEM----IREADVDGDGQVNYEEFVQVM 145
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLR-IPELAINP----LGDRIVHVFFEEGCSD 76
++ QI F D+ G ++ E+ I L NP L D I V + +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
+ F +F+ ++A KK K+ E++LK AFK++D D + IS EL H+M+
Sbjct: 62 TIEFDEFLSLMA-----KKVKDT---DAEEELKEAFKVFDKDQNGYISASELR---HVMI 110
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ E+ I EAD +GD ++++EF K +
Sbjct: 111 --NLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 145
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 103 SREQKLKF--AFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
S EQ + F AF ++D D D I+ +EL V+ + N +EE+L + I E D +G
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDM----ISEVDADG 59
Query: 161 DQMISFDEF----CKALERTDVEQKMSIRF 186
+ I FDEF K ++ TD E+++ F
Sbjct: 60 NGTIEFDEFLSLMAKKVKDTDAEEELKEAF 89
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 31 YSRFTSLDRGDCGTLSREDFLRIPELAINPLG---DRIVHVFFEEGCSDRVNFRQFMQVL 87
+ F + GD T +R+ L NP D I+ E+G S ++F +F+ ++
Sbjct: 26 FDMFDADGGGDISTKELGTVMRM--LGQNPTKEELDAIIEEVDEDG-SGTIDFEEFLVMM 82
Query: 88 ARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTS 147
R + KE+ E++L+ F+++D + D I +EL +L G +++EE +
Sbjct: 83 VR-----QMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRA-TGEHVTEEDI-- 134
Query: 148 IAERTILEADQNGDQMISFDEFCKALE 174
E + ++D+N D I FDEF K +E
Sbjct: 135 --EDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDF 75
Query: 167 DEF 169
+EF
Sbjct: 76 EEF 78
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERT----ILEADQNG 160
E++L+ AF ++D D I+++EL + LTSI+E+T + EADQN
Sbjct: 434 EERLRRAFNLFDTDKSGKITKEELANLF-----------GLTSISEKTWNDVLGEADQNK 482
Query: 161 DQMISFDEFCKALER 175
D MI FDEF + +
Sbjct: 483 DNMIDFDEFVSMMHK 497
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 16/147 (10%)
Query: 31 YSRFTSLDRGDCGTLSREDFLRIPELAINPLG---DRIVHVFFEEGCSDRVNFRQFMQVL 87
+ F + GD T +R+ L NP D I+ E+G S ++F +F+ ++
Sbjct: 23 FDMFDADGGGDISTKELGTVMRM--LGQNPTKEELDAIIEEVDEDG-SGTIDFEEFLVMM 79
Query: 88 ARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTS 147
R + KE+ E++L F+++D + D I +EL +L G +++EE +
Sbjct: 80 VR-----QMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA-TGEHVTEEDI-- 131
Query: 148 IAERTILEADQNGDQMISFDEFCKALE 174
E + ++D+N D I FDEF K +E
Sbjct: 132 --EDLMKDSDKNNDGRIDFDEFLKMME 156
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDF 72
Query: 167 DEF 169
+EF
Sbjct: 73 EEF 75
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 16/147 (10%)
Query: 31 YSRFTSLDRGDCGTLSREDFLRIPELAINPLG---DRIVHVFFEEGCSDRVNFRQFMQVL 87
+ F + GD T +R+ L NP D I+ E+G S ++F +F+ ++
Sbjct: 26 FDMFDADGGGDISTKELGTVMRM--LGQNPTKEELDAIIEEVDEDG-SGTIDFEEFLVMM 82
Query: 88 ARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTS 147
R + KE+ E++L F+++D + D I +EL +L G +++EE +
Sbjct: 83 VR-----QMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA-TGEHVTEEDI-- 134
Query: 148 IAERTILEADQNGDQMISFDEFCKALE 174
E + ++D+N D I FDEF K +E
Sbjct: 135 --EDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDF 75
Query: 167 DEF 169
+EF
Sbjct: 76 EEF 78
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 16/147 (10%)
Query: 31 YSRFTSLDRGDCGTLSREDFLRIPELAINPLG---DRIVHVFFEEGCSDRVNFRQFMQVL 87
+ F + GD T +R+ L NP D I+ E+G S ++F +F+ ++
Sbjct: 26 FDMFDADGGGDISTKELGTVMRM--LGQNPTKEELDAIIEEVDEDG-SGTIDFEEFLVMM 82
Query: 88 ARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTS 147
R + KE+ E++L F+++D + D I +EL +L G +++EE +
Sbjct: 83 VR-----QMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRA-TGEHVTEEDI-- 134
Query: 148 IAERTILEADQNGDQMISFDEFCKALE 174
E + ++D+N D I FDEF K +E
Sbjct: 135 --EDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDF 75
Query: 167 DEF 169
+EF
Sbjct: 76 EEF 78
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR K KE E++L AFK++D D + IS EL V+
Sbjct: 62 TIDFPEFLSLMAR-----KMKEQ---DSEEELIEAFKVFDRDGNGLISAAELRHVM---- 109
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD I+++EF + +
Sbjct: 110 -TNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 99 NKLNSREQKLKFAFKMYDLDNDDAISRDELLAVL---HMMVGAN----ISEEQLTSIAER 151
+ + + +KLK+AF +YD++ D I+++E+LA++ + M+G + + E+ ER
Sbjct: 2 SHMGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVER 61
Query: 152 TILEADQNGDQMISFDEFCKALER 175
+ D+N D +++ +EF +A ++
Sbjct: 62 FFEKMDRNQDGVVTIEEFLEACQK 85
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR K+ E++++ AF+++D D + IS EL V+ +
Sbjct: 62 TIDFPEFLTMMAR----------KMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL- 110
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF +
Sbjct: 111 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVTMM 143
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 362
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR+ K E++++ AF+++D D + IS EL V+
Sbjct: 363 TIDFPEFLTMMARWM--------KDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 410
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 411 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 362
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 363 TIDFPEFLTMMAR--------KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 410
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 411 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 6 SLLLREEEIAQ-IQEETVTPNQIERLYSRFTSLD---RGDCGTLSREDFLRIPELAINPL 61
+L+LR +++A I + +++L + F LD +G+ L L L + P
Sbjct: 32 ALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPN 91
Query: 62 GDRIVHVFFEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKF-AFKMYDLDND 120
D ++ +G S +++ +F+ R + K KL + AF+++D+DND
Sbjct: 92 FDLLLDQIDSDG-SGNIDYTEFLAAAIDRRQLSK-----------KLIYCAFRVFDVDND 139
Query: 121 DAISRDELLAVL-HMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 176
I+ EL VL + NI+E + + ++ I E D+NGD I F EF + ++ T
Sbjct: 140 GEITTAELAHVLFNGNKRGNITERDVNQV-KKMIREVDKNGDGKIDFYEFSEMMKLT 195
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 63 DRIVHVFFEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDA 122
D I+ E+G S ++F +F+ ++ R + KE+ E++L F+++D + D
Sbjct: 56 DAIIEEVDEDG-SGTIDFEEFLVMMVR-----QMKEDAKGKSEEELAECFRIFDRNADGY 109
Query: 123 ISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 174
I +EL + G ++++E++ S+ + + D+N D I FDEF K +E
Sbjct: 110 IDAEELAEIFRA-SGEHVTDEEIESL----MKDGDKNNDGRIDFDEFLKMME 156
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G ++E+L +I E E D++G I F
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRML-GQTPTKEELDAIIE----EVDEDGSGTIDF 72
Query: 167 DEF 169
+EF
Sbjct: 73 EEF 75
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V +
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGDG 361
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 362 TIDFPEFLTMMAR--------KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 409
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 410 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +GD I F
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDF 365
Query: 167 DEFCKALER----TDVEQKM 182
EF + R TD E+++
Sbjct: 366 PEFLTMMARKMKYTDSEEEI 385
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGDG 362
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 363 TIDFPEFLTMMAR--------KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 410
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 411 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 102 NSREQ-------KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTIL 154
N+R+Q + K AF ++D D D I+ EL V+ + G N +E +L + I
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----IN 354
Query: 155 EADQNGDQMISFDEFCKALER----TDVEQKM 182
E D +GD I F EF + R TD E+++
Sbjct: 355 EVDADGDGTIDFPEFLTMMARKMKYTDSEEEI 386
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V +
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGDG 361
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 362 TIDFPEFLTMMAR--------KMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 409
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 410 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +GD I F
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDF 365
Query: 167 DEFCKALER----TDVEQKM 182
EF + R TD E+++
Sbjct: 366 PEFLTMMARKMKYTDSEEEI 385
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 1 MGNRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRI-----P 54
MGN S L +E + ++Q T T ++ Y F L G ++R++F I P
Sbjct: 1 MGNSKSGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFP 58
Query: 55 ELAINPLGDRIVHVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAF 112
E HVF F+ ++F++++ L + K N QKL++AF
Sbjct: 59 EADPKAYAQ---HVFRSFDANSDGTLDFKEYVIALHM------TSAGKTN---QKLEWAF 106
Query: 113 KMYDLDNDDAISRDELLAVL 132
+YD+D + IS++E+L ++
Sbjct: 107 SLYDVDGNGTISKNEVLEIV 126
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 63 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 110
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ ++ I EAD +GD ++++EF + +
Sbjct: 111 -TNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 11/112 (9%)
Query: 63 DRIVHVFFEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDA 122
D I+ E+G S ++F +F+ ++ R + KE+ E++L F+++D + D
Sbjct: 56 DAIIEEVDEDG-SGTIDFEEFLVMMVR-----QMKEDAKGKSEEELAELFRIFDRNADGY 109
Query: 123 ISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 174
I +EL + G ++++E++ S+ + + D+N D I FDEF K +E
Sbjct: 110 IDAEELAEIFRA-SGEHVTDEEIESL----MKDGDKNNDGRIDFDEFLKMME 156
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G ++E+L +I E E D++G I F
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRML-GQTPTKEELDAIIE----EVDEDGSGTIDF 72
Query: 167 DEFC 170
+EF
Sbjct: 73 EEFL 76
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 59
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 60 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 110
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 111 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 143
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 31 YSRFTSLDRGDCGTLSREDFLRIPELAINPLG---DRIVHVFFEEGCSDRVNFRQFMQVL 87
+ F + GD T +R+ L NP D I+ E+G S ++F +F+ ++
Sbjct: 26 FDMFDADGGGDISTKELGTVMRM--LGQNPTKEELDAIIEEVDEDG-SGTIDFEEFLVMM 82
Query: 88 ARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTS 147
R + KE+ E++L F+++D + D I +EL +L G ++ EE +
Sbjct: 83 VR-----QMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA-TGEHVIEEDI-- 134
Query: 148 IAERTILEADQNGDQMISFDEFCKALE 174
E + ++D+N D I FDEF K +E
Sbjct: 135 --EDLMKDSDKNNDGRIDFDEFLKMME 159
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDF 75
Query: 167 DEF 169
+EF
Sbjct: 76 EEF 78
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 63 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 113
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 114 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 146
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++LK AFK++D D + IS EL H+M+ N+ E+ E+ I EAD +GD +
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELR---HVMI--NLGEKLTDEEVEQMIKEADLDGDGQV 62
Query: 165 SFDEFCKAL 173
+++EF K +
Sbjct: 63 NYEEFVKMM 71
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 59
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 60 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 107
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 108 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 63 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 110
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 111 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 63 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 113
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 114 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 146
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 63 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 113
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 114 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 146
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 62 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 113 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 145
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 63
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 64 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 114
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 115 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 147
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 58
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 59 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 106
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 107 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 60
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 61 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 108
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 109 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 67
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 68 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 118
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 119 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 62 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 113 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 145
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 65
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 66 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 116
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 117 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 149
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 2 ATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 59
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 60 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 110
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 111 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 143
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 363
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 364 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 411
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 412 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 362
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 363 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 410
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 411 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 362
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 363 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 410
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 411 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 2 GNRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRI-----PE 55
GN S L +E + ++Q T T ++ Y F L G ++R++F I PE
Sbjct: 1 GNSKSGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPE 58
Query: 56 LAINPLGDRIVHVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFK 113
HVF F+ ++F+Q++ L + K N QKL++AF
Sbjct: 59 ADPKAYAQ---HVFRSFDANSDGTLDFKQYVIALHM------TSAGKTN---QKLEWAFS 106
Query: 114 MYDLDNDDAISRDELLAVL 132
+YD+D + IS++E+L ++
Sbjct: 107 LYDVDGNGTISKNEVLEIV 125
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 63 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 113
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 114 GEXLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 62 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 113 GEXLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 145
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 20/156 (12%)
Query: 23 TPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSDR 77
T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGT 58
Query: 78 VNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVG 137
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ + G
Sbjct: 59 IDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL-G 109
Query: 138 ANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
+++E++ + I EAD +GD ++++EF + +
Sbjct: 110 EKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 141
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 325
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 326 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 373
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 374 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 20/155 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
+NF +F+ AR K E++++ AF+++D D + IS EL V +
Sbjct: 62 TINFPEFLTXXARCX--------KDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCK 171
G +++E++ + I EAD +GD ++++EF +
Sbjct: 113 GEKLTDEEV----DEXIREADIDGDGQVNYEEFVQ 143
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 328
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 329 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 376
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 377 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 328
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 329 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 376
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 377 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 102 NSREQ-------KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTIL 154
NSR+Q + K AF ++D D D I+ EL V+ + G N +E +L + I
Sbjct: 266 NSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----IN 320
Query: 155 EADQNGDQMISFDEFCKALER----TDVEQKMSIRF 186
E D +G+ I F EF + R TD E+++ F
Sbjct: 321 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF 356
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGDG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 62 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF + +
Sbjct: 113 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 145
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +GD I F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDF 65
Query: 167 DEFCKALER----TDVEQKMSIRF 186
EF + R TD E+++ F
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAF 89
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++LK AFK++D D + IS EL H+M+ N+ E+ E+ I EAD +GD +
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELR---HVMI--NLGEKLTDEEVEQMIKEADLDGDGQV 57
Query: 165 SFDEFCKAL 173
+++EF K +
Sbjct: 58 NYEEFVKMM 66
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 102 NSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGD 161
+SRE+ LK AF+++D DN I+ +L V + G N++EE+L + I EAD+N D
Sbjct: 6 DSREEILK-AFRLFDDDNSGTITIKDLRRVAKEL-GENLTEEELQEM----IAEADRNDD 59
Query: 162 QMISFDEFCKALERT 176
I DEF + +++T
Sbjct: 60 NEIDEDEFIRIMKKT 74
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V +
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGDG 361
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 362 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 409
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 410 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 102 NSREQ-------KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTIL 154
N+R+Q + K AF ++D D D I+ EL V+ + G N +E +L + I
Sbjct: 299 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----IN 353
Query: 155 EADQNGDQMISFDEFCKALER----TDVEQKM 182
E D +GD I F EF + R TD E+++
Sbjct: 354 EVDADGDGTIDFPEFLTMMARKMKDTDSEEEI 385
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 29/180 (16%)
Query: 6 SLLLREEEIAQ-IQEETVTPNQIERLYSRFTSLDRGDCGTLSRE--------DFLRIPEL 56
LLL+ +++A I + +E+L S F LD G +++E D L++P
Sbjct: 29 GLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-Y 87
Query: 57 AINPLGDRIVHVFFEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKF-AFKMY 115
+ L D+I + S ++++ +F+ + + K KL + AF+++
Sbjct: 88 NFDLLLDQI-----DSDGSGKIDYTEFIAAALDRKQLSK-----------KLIYCAFRVF 131
Query: 116 DLDNDDAISRDELLAVLH-MMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 174
D+DND I+ EL +L+ NI++ + + +R I + D+N D I F EF + ++
Sbjct: 132 DVDNDGEITTAELAHILYNGNKKGNITQRDVNRV-KRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTL-SREDFLRIPELAINPLGDRIVHVF--FEEGCSDRV 78
+T Q + + F D GT+ ++E + + L P + I + ++ S +
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 79 NFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGA 138
+F +F+Q++ +K + +SRE+ +K AF+++D D IS L V + G
Sbjct: 62 DFEEFLQMMT-------AKMGERDSREEIMK-AFRLFDDDETGKISFKNLKRVAKEL-GE 112
Query: 139 NISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 176
N+++E+L + I EAD++GD ++ +EF + +++T
Sbjct: 113 NMTDEELQEM----IDEADRDGDGEVNEEEFFRIMKKT 146
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 62 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF +
Sbjct: 113 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVTMM 145
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 63 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL- 113
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF +
Sbjct: 114 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVTMM 146
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 62 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF +
Sbjct: 113 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVTMM 145
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 63 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL- 113
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EAD +GD ++++EF +
Sbjct: 114 GEKLTDEEVDEM----IREADIDGDGQVNYEEFVTMM 146
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 20/155 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ AR + K E++++ AF+++D D + IS EL V +
Sbjct: 63 TIDFPEFLTXXAR--------KXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL- 113
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCK 171
G +++E++ ++ I EAD +GD ++++EF +
Sbjct: 114 GEKLTDEEV----DQXIREADIDGDGQVNYEEFVQ 144
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 22 VTPNQIERLYSRFTSLDR-GDCGTLSREDFLRIPELAINPLGDRIVHVFFE--EGCSDRV 78
+T Q+ F+ D+ GD +RE + L NP + + E + V
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 79 NFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGA 138
+F +F+ ++AR + K E++++ AF+++D D + +S EL V+ + G
Sbjct: 64 DFPEFLGMMAR--------KMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRL-GE 114
Query: 139 NISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
+S+E++ + I AD +GD ++++EF + L
Sbjct: 115 KLSDEEVDEM----IRAADTDGDGQVNYEEFVRVL 145
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 2 GNRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRI-----PE 55
GN S L +E + ++Q T T ++ Y F L G ++R++F I PE
Sbjct: 1 GNSKSGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPE 58
Query: 56 LAINPLGDRIVHVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFK 113
HVF F+ ++F++++ L + K N QKL++AF
Sbjct: 59 ADPKAYAQ---HVFRSFDANSDGTLDFKEYVIALHM------TSAGKTN---QKLEWAFS 106
Query: 114 MYDLDNDDAISRDELLAVL 132
+YD+D + IS++E+L ++
Sbjct: 107 LYDVDGNGTISKNEVLEIV 125
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 2 GNRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRI-----PE 55
GN S L +E + ++Q T T ++ Y F L G ++R++F I PE
Sbjct: 1 GNSKSGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPE 58
Query: 56 LAINPLGDRIVHVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFK 113
HVF F+ ++F++++ L + K N QKL++AF
Sbjct: 59 ADPKAYAQ---HVFRSFDANSDGTLDFKEYVIALHM------TSAGKTN---QKLEWAFS 106
Query: 114 MYDLDNDDAISRDELLAVL 132
+YD+D + IS++E+L ++
Sbjct: 107 LYDVDGNGTISKNEVLEIV 125
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V +
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGDG 353
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+
Sbjct: 354 TIDFPEFLIMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM---- 401
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EAD +GD ++++EF + +
Sbjct: 402 -TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +GD I F
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDF 357
Query: 167 DEF----CKALERTDVEQKM 182
EF + ++ TD E+++
Sbjct: 358 PEFLIMMARKMKDTDSEEEI 377
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 25 NQIERLYSRFTSLDRG--DCGTLSREDFLRIPELAI-------NPLGDRIVHVFFEEGCS 75
++IE LY F + D G +++E+F +LA+ + DR+ +F + +
Sbjct: 14 SEIEALYELFKKISSAVIDDGLINKEEF----QLALFKTNKKESLFADRVFDLF-DTKHN 68
Query: 76 DRVNFRQFMQVLARFRPIKKSKENKLNSR-EQKLKFAFKMYDLDNDDAISRDELLAVLHM 134
+ F +F + L+ F P N+ + K+ F+F++YDL I R E V M
Sbjct: 69 GILGFEEFARALSVFHP---------NAPIDDKIHFSFQLYDLKQQGFIERQE---VKQM 116
Query: 135 MV------GANISEEQLTSIAERTILEADQNGDQMISFDEF-CKALERTDVEQKMSIRFL 187
+V G N+ + + I ++T EAD D I +E+ L + + M++++L
Sbjct: 117 VVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYL 176
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 62 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I EA+ +GD ++++EF + +
Sbjct: 113 GEKLTDEEVDEM----IREANIDGDGQVNYEEFVQMM 145
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEV--DADGNG 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ AR + K E++++ AF+++D D + IS EL V +
Sbjct: 62 TIDFPEFLTXXAR--------KXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL- 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCK 171
G +++E++ + I EAD +GD ++++EF +
Sbjct: 113 GEKLTDEEV----DEXIREADIDGDGQVNYEEFVQ 143
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 23 TPNQIERLYSRFTSLDRGDCGTLS-REDFLRIPELAINPLGDRIVHVFFE---EGCSDRV 78
T Q + + F D GT+ +E + + L P + I + E EG ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTG-KM 59
Query: 79 NFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGA 138
NF F+ V+ + K +KE L AFK++D D IS L V + G
Sbjct: 60 NFGDFLTVMTQKMSEKDTKEEILK--------AFKLFDDDETGKISFKNLKRVAKEL-GE 110
Query: 139 NISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 175
N+++E+L + I EAD++GD +S EF + +++
Sbjct: 111 NLTDEELQEM----IDEADRDGDGEVSEQEFLRIMKK 143
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDF 64
Query: 167 DEFCKALER 175
+EF + R
Sbjct: 65 EEFLVMMVR 73
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 75 SDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHM 134
+++ F F++ +A I + K EQKLK+ FK+YD D + +I ++ELL +
Sbjct: 68 TNKDGFVDFLEFIAAVNLIMQEK------MEQKLKWYFKLYDADGNGSIDKNELLDMFMA 121
Query: 135 MVGAN----ISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 175
+ N +S E+ ++ I D N D ++ +EF + +
Sbjct: 122 VQALNGQQTLSPEEFINLVFHKI---DINNDGELTLEEFINGMAK 163
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSD 76
+T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNG 62
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++F +F+ ++AR + K E++++ AF+++D D + IS EL V+ +
Sbjct: 63 TIDFPEFLTMMAR--------KMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL- 113
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
G +++E++ + I E+D +GD ++++EF +
Sbjct: 114 GEKLTDEEVDEM----IRESDIDGDGQVNYEEFVTMM 146
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 43 GTLSREDFLRIPE-LAINPLGDRIVHVFFE--EGCSDRVNFRQFMQVLARFRPIKKSKEN 99
G++S ++ ++ L NP + + + E E S V+F +F+ ++ R K++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR-----SMKDD 88
Query: 100 KLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
E++L F+M+D + D I DEL +L G I+E+ + E + + D+N
Sbjct: 89 SKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQ-ATGETITEDDI----EELMKDGDKN 143
Query: 160 GDQMISFDEFCK 171
D I +DEF +
Sbjct: 144 NDGRIDYDEFLE 155
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 103 SREQKLKF--AFKMYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
+ EQK +F AF ++ L +D +IS EL V+ M+ G N + E+L + I E D++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDED 67
Query: 160 GDQMISFDEFCKALERT 176
G + FDEF + R+
Sbjct: 68 GSGTVDFDEFLVMMVRS 84
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDF 75
Query: 167 DEFCKALER 175
+EF + R
Sbjct: 76 EEFLVMMVR 84
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 25 NQIERLYSRFTSLDRG--DCGTLSREDFLRIPELAI-------NPLGDRIVHVFFEEGCS 75
++IE LY F + D G +++E+F +LA+ + DR+ +F + +
Sbjct: 45 SEIEALYELFKKISSAVIDDGLINKEEF----QLALFKTNKKESLFADRVFDLF-DTKHN 99
Query: 76 DRVNFRQFMQVLARFRPIKKSKENKLNSR-EQKLKFAFKMYDLDNDDAISRDELLAVLHM 134
+ F +F + L+ F P N+ + K+ F+F++YDL I R E V M
Sbjct: 100 GILGFEEFARALSVFHP---------NAPIDDKIHFSFQLYDLKQQGFIERQE---VKQM 147
Query: 135 MV------GANISEEQLTSIAERTILEADQNGDQMISFDEF-CKALERTDVEQKMSIRFL 187
+V G N+ + + I ++T EAD D I +E+ L + + M++++L
Sbjct: 148 VVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYL 207
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 3 NRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRI-----PEL 56
N S L +E + ++Q T T ++ Y F L G ++R++F I PE
Sbjct: 2 NSKSGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEA 59
Query: 57 AINPLGDRIVHVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKM 114
HVF F+ ++F+Q++ L + K N QKL++AF +
Sbjct: 60 DPKAYAQ---HVFRSFDANSDGTLDFKQYVIALHM------TSAGKTN---QKLEWAFSL 107
Query: 115 YDLDNDDAISRDELLAVL 132
YD+D + IS++E+L ++
Sbjct: 108 YDVDGNGTISKNEVLEIV 125
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 23 TPNQIERLYSRFTSLDRGDC--GTLSREDFLRIPELAINPLGDRIVHVFFEEGCSDR--- 77
T +++ LY F + +C G ++ E F I P GD + F D
Sbjct: 62 TKKELQILYRGF----KNECPSGVVNEETFKEIYS-QFFPQGDSTTYAHFLFNAFDTDHN 116
Query: 78 --VNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELL----AV 131
V+F F++ L+ + ++KL +AF +YD++ D I+++E+L A+
Sbjct: 117 GAVSFEDFIKGLSILLR---------GTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAI 167
Query: 132 LHMMVGAN---ISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 175
MM + E+ E + D+N D +++ DEF ++ ++
Sbjct: 168 YDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQK 214
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 43 GTLSREDFLRIPE-LAINPLGDRIVHVFFE--EGCSDRVNFRQFMQVLARFRPIKKSKEN 99
G++S ++ ++ L NP + + + E E S V+F +F+ ++ R K++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR-----SMKDD 88
Query: 100 KLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
E++L F+M+D + D I DEL +L G I+E+ + E + + D+N
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQ-ATGETITEDDI----EELMKDGDKN 143
Query: 160 GDQMISFD---EFCKALE 174
D I +D EF K +E
Sbjct: 144 NDGRIDYDEXLEFMKGVE 161
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 103 SREQKLKF--AFKMYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
+ EQK +F AF ++ L +D +IS EL V+ M+ G N + E+L + I E D++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDED 67
Query: 160 GDQMISFDEFCKALERT 176
G + FDEF + R+
Sbjct: 68 GSGTVDFDEFLVMMVRS 84
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 43 GTLSREDFLRIPE-LAINPLGDRIVHVFFE--EGCSDRVNFRQFMQVLARFRPIKKSKEN 99
G++S ++ ++ L NP + + + E E S V+F +F+ ++ R K++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR-----SMKDD 88
Query: 100 KLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
E++L F+M+D + D I DEL +L G I+E+ + E + + D+N
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQ-ATGETITEDDI----EELMKDGDKN 143
Query: 160 GDQMISFD---EFCKALE 174
D I +D EF K +E
Sbjct: 144 NDGRIDYDEWLEFMKGVE 161
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 103 SREQKLKF--AFKMYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
+ EQK +F AF ++ L +D +IS EL V+ M+ G N + E+L + I E D++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDED 67
Query: 160 GDQMISFDEFCKALERT 176
G + FDEF + R+
Sbjct: 68 GSGTVDFDEFLVMMVRS 84
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 23 TPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINP----LGDRIVHVFFEEGCSDR 77
T QI F+ D+ GT++ ++ + L NP L D I V + +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGT 58
Query: 78 VNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVG 137
++F +F+ ++AR K K ++ ++++ AF+++D D + IS EL V+
Sbjct: 59 IDFPEFLTMMAR-----KMK----DTDSEEIREAFRVFDKDGNGYISAAELRHVM----- 104
Query: 138 ANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 173
N+ E+ + I EA+ +GD ++++EF + +
Sbjct: 105 TNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMM 140
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++LK AF+++D D + IS EL V+ N+ E+ + I EAD +GD I
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQI 57
Query: 165 SFDEFCKAL 173
+++EF K +
Sbjct: 58 NYEEFVKVM 66
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 3 NRSSLLLREEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRI-----PEL 56
N S L +E + ++Q T T ++ Y F L G ++R++F I PE
Sbjct: 2 NSKSGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEA 59
Query: 57 AINPLGDRIVHVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKM 114
HVF F+ ++F++++ L + K N QKL++AF +
Sbjct: 60 DPKAYAQ---HVFRSFDANSDGTLDFKEYVIALHM------TSAGKTN---QKLEWAFSL 107
Query: 115 YDLDNDDAISRDELLAVL 132
YD+D + IS++E+L ++
Sbjct: 108 YDVDGNGTISKNEVLEIV 125
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 43 GTLSREDFLRIPE-LAINPLGDRIVHVFFE--EGCSDRVNFRQFMQVLARFRPIKKSKEN 99
G++S ++ ++ L NP + + + E E S V+F +F+ ++ R K++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR-----SMKDD 88
Query: 100 KLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
E++L F+M D + D I DEL +L G I+E+ + E + + D+N
Sbjct: 89 SKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQ-ATGETITEDDI----EELMKDGDKN 143
Query: 160 GDQMISFDEFCK 171
D I +DEF +
Sbjct: 144 NDGRIDYDEFLE 155
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 103 SREQKLKF--AFKMYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
+ EQK +F AF ++ L +D +IS EL V+ M+ G N + E+L + I E D++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDED 67
Query: 160 GDQMISFDEFCKALERT 176
G + FDEF + R+
Sbjct: 68 GSGTVDFDEFLVMMVRS 84
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 106 QKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMIS 165
++L+ AF+ +D + D IS EL + ++G + + I I + D NGD +
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI----IRDVDLNGDGRVD 62
Query: 166 FDEFCKALER 175
F+EF + + R
Sbjct: 63 FEEFVRMMSR 72
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 106 QKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMIS 165
++L+ AF+ +D + D IS EL + ++G + + I I + D NGD +
Sbjct: 102 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI----IRDVDLNGDGRVD 157
Query: 166 FDEFCKALER 175
F+EF + + R
Sbjct: 158 FEEFVRMMSR 167
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 78 VNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVG 137
+NF F+ V+ + K +KE L AFK++D D IS L V + G
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILK--------AFKLFDDDETGKISFKNLKRVAKEL-G 51
Query: 138 ANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 176
N+++E+L + I EAD++GD +S EF + +++T
Sbjct: 52 ENLTDEELQEM----IDEADRDGDGEVSEQEFLRIMKKT 86
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 106 QKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMIS 165
++L+ AF+ +D + D IS EL + ++G + + I I + D NGD +
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEI----IRDVDLNGDGRVD 143
Query: 166 FDEFCKALER 175
F+EF + + R
Sbjct: 144 FEEFVRMMSR 153
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS L V+ M+ G N ++E+L +I E E D++G I F
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDF 75
Query: 167 DEFCKALER 175
+EF + R
Sbjct: 76 EEFLVMMVR 84
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 43 GTLSREDFLRIPE-LAINPLGDRIVHVFFE--EGCSDRVNFRQFMQVLARFRPIKKSKEN 99
G++S ++ ++ L NP + + + E E S V+F +F+ ++ R K++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR-----SMKDD 88
Query: 100 KLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
E++L F+M+D + D I +EL +L G I+E+ + E + + D+N
Sbjct: 89 SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDI----EELMKDGDKN 143
Query: 160 GDQMISFDEFCK 171
D I +DEF +
Sbjct: 144 NDGRIDYDEFLE 155
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 103 SREQKLKF--AFKMYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
+ EQK +F AF ++ L +D +IS EL V+ M+ G N + E+L + I E D++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDED 67
Query: 160 GDQMISFDEFCKALERT 176
G + FDEF + R+
Sbjct: 68 GSGTVDFDEFLVMMVRS 84
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 43 GTLSREDFLRIPE-LAINPLGDRIVHVFFE--EGCSDRVNFRQFMQVLARFRPIKKSKEN 99
G++S ++ ++ L NP + + + E E S V+F +F+ ++ R K++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR-----SMKDD 88
Query: 100 KLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
E++L F+M+D + D I +EL +L G I+E+ + E + + D+N
Sbjct: 89 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDI----EELMKDGDKN 143
Query: 160 GDQMISFDEFCK 171
D I +DEF +
Sbjct: 144 NDGRIDYDEFLE 155
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 103 SREQKLKF--AFKMYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
+ EQK +F AF ++ L +D +IS EL V+ M+ G N + E+L + I E D++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDED 67
Query: 160 GDQMISFDEFCKALERT 176
G + FDEF + R+
Sbjct: 68 GSGTVDFDEFLVMMVRS 84
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 101 LNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
L SRE +L+ AF+M+D DN IS EL + + +++ E S+ + E D+N
Sbjct: 438 LLSRE-RLERAFRMFDSDNSGKISSTELATIFGV---SDVDSETWKSV----LSEVDKNN 489
Query: 161 DQMISFDEFCKAL 173
D + FDEF + L
Sbjct: 490 DGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 101 LNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
L SRE +L+ AF+M+D DN IS EL + + +++ E S+ + E D+N
Sbjct: 437 LLSRE-RLERAFRMFDSDNSGKISSTELATIFGV---SDVDSETWKSV----LSEVDKNN 488
Query: 161 DQMISFDEFCKAL 173
D + FDEF + L
Sbjct: 489 DGEVDFDEFQQML 501
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 106 QKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMIS 165
++L+ AF+ +D + D IS EL + ++G + + I I + D NGD +
Sbjct: 88 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI----IRDVDLNGDGRVD 143
Query: 166 FDEFCKALER 175
F+EF + + R
Sbjct: 144 FEEFVRMMSR 153
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF M+D D IS EL V+ M+ G N ++ +L +I I E D++G I F
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKCELDAI----ICEVDEDGSGTIDF 75
Query: 167 DEF 169
+EF
Sbjct: 76 EEF 78
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 101 LNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
L SRE +L+ AF+M+D DN IS EL + + +++ E S+ + E D+N
Sbjct: 414 LLSRE-RLERAFRMFDSDNSGKISSTELATIFGV---SDVDSETWKSV----LSEVDKNN 465
Query: 161 DQMISFDEFCKAL 173
D + FDEF + L
Sbjct: 466 DGEVDFDEFQQML 478
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +GD I F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 PEFLTMMAR 74
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 10 REEEIAQIQEET-VTPNQIERLYSRFTSLDRGDC--GTLSREDFLRIPELAINPLGDRIV 66
R E + Q++ +T T +++ LY F + +C G ++ E F +I P GD
Sbjct: 35 RPEGLEQLEAQTNFTKRELQVLYRGF----KNECPSGVVNEETFKQI-YAQFFPHGDAST 89
Query: 67 HVF-----FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDD 121
+ F+ + V F F+ L+ + +KL++ F +YD++ D
Sbjct: 90 YAHYLFNAFDTTQTGSVKFEDFVTALSILLR---------GTVHEKLRWTFNLYDINKDG 140
Query: 122 AISRDELLAV---LHMMVGAN----ISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 174
I+++E++ + ++ M+G + E+ + + D+N D +++ DEF ++ +
Sbjct: 141 YINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 200
Query: 175 RTD 177
D
Sbjct: 201 EDD 203
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 56 LAINPLGDRIVHVFFE--EGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFK 113
L NP + + + E E S V+F +F+ ++ R K++ E++L F+
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCM-----KDDSKGKTEEELSDLFR 102
Query: 114 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 169
M+D + D I +EL +L G I+E+ + E + + D+N D I +DEF
Sbjct: 103 MFDKNADGYIDLEELKIMLQ-ATGETITEDDI----EELMKDGDKNNDGRIDYDEF 153
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 103 SREQKLKF--AFKMYDLDNDDA-ISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
+ EQK +F AF ++ L +D IS EL V+ M+ G N + E+L + I E D++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRML-GQNPTPEELQEM----IDEVDED 67
Query: 160 GDQMISFDEF 169
G + FDEF
Sbjct: 68 GSGTVDFDEF 77
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 72 EGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAV 131
EG + NF F+ V + K ++ +++E+ LK AFK++D D IS L V
Sbjct: 79 EGTG-KXNFGDFLTVXTQ-------KXSEKDTKEEILK-AFKLFDDDETGKISFKNLKRV 129
Query: 132 LHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 176
+ G N+++E+L + I EAD++GD +S EF + ++T
Sbjct: 130 AKEL-GENLTDEEL----QEXIDEADRDGDGEVSEQEFLRIXKKT 169
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 103 SREQKLKF--AFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
S EQ + F AF ++D D D I+ +EL V+ + N +EE+L + I E D +G
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDM----ISEVDADG 59
Query: 161 DQMISFDEFCKALER 175
+ I FDEF + +
Sbjct: 60 NGTIEFDEFLSLMAK 74
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 103 SREQKLKF--AFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
S EQ + F AF ++D D D I+ +EL V+ + N +EE+L + I E D +G
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-DQNPTEEELQDM----ISEVDADG 59
Query: 161 DQMISFDEFCKALER 175
+ I FDEF + +
Sbjct: 60 NGTIEFDEFLSLMAK 74
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF +YD D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSL-GLNPTEAELQDM----INEVDADGNGTIDF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 PEFLTMMAR 74
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 85 QVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDEL---LAVLHMMVGAN-- 139
++ + E +++ +E +L + FKM+D D ++ + EL + +H G+
Sbjct: 48 HIMEHLEGVINKPEAEMSPQELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQA 106
Query: 140 --ISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 174
+SE++L +I + + + D+N D I + EF K+L+
Sbjct: 107 PLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 143
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA-DQNGDQMIS 165
KL+ AF+ +D D + IS DEL +V + + L S + ++ D N D +
Sbjct: 144 KLESAFQKFDQDGNGKISVDELASVFGL--------DHLESKTWKEMISGIDSNNDGDVD 195
Query: 166 FDEFCKALER 175
F+EFCK +++
Sbjct: 196 FEEFCKMIQK 205
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA-DQNGDQMIS 165
KL+ AF+ +D D + IS DEL +V + + L S + ++ D N D +
Sbjct: 427 KLESAFQKFDQDGNGKISVDELASVFGL--------DHLESKTWKEMISGIDSNNDGDVD 478
Query: 166 FDEFCKALER 175
F+EFCK +++
Sbjct: 479 FEEFCKMIQK 488
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 85 QVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDEL---LAVLHMMVGAN-- 139
++ + E +++ +E +L + FKM+D D ++ + EL + +H G+
Sbjct: 29 HIMEHLEGVINKPEAEMSPQELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQA 87
Query: 140 --ISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 174
+SE++L +I + + + D+N D I + EF K+L+
Sbjct: 88 PLMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 124
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAV---LHMMVGAN----ISEEQLTSIAERTILEAD 157
+KL++ F +YD++ D I+++E++ + ++ M+GA ++E+ + + D
Sbjct: 88 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMD 147
Query: 158 QNGDQMISFDEFCKALERTD 177
+N D +++ DEF ++ + D
Sbjct: 148 KNKDGIVTLDEFLESCQEDD 167
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 10 REEEIAQIQEET-VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIPELAINPLGDRIVHV 68
R E + Q++ +T T +++ LY F + G ++ E F +I P GD +
Sbjct: 2 RPEGLEQLEAQTNFTKRELQVLYRGFK--NEXPSGVVNEETFKQI-YAQFFPHGDASTYA 58
Query: 69 F-----FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAI 123
F+ + V F F+ L+ + +KL++ F +YD++ D I
Sbjct: 59 HYLFNAFDTTQTGSVKFEDFVTALSILLR---------GTVHEKLRWTFNLYDINKDGYI 109
Query: 124 SRDELLAV---LHMMVGAN----ISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 176
+++E++ + ++ M+G + E+ + + D+N D +++ DEF ++ +
Sbjct: 110 NKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQED 169
Query: 177 D 177
D
Sbjct: 170 D 170
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 20 ETVTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINPLGDRIVHVFFE---EGCS 75
+ +T QI F D+ + G++S + + L ++P + + E +G +
Sbjct: 3 QNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG-N 61
Query: 76 DRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVL 132
+ F +F+ +++R + K N EQ+L AFK++D + D IS EL VL
Sbjct: 62 HAIEFSEFLALMSR--------QLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVL 110
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 101 LNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
L SRE +++ AFKM+D D IS EL L ++I E+L SI E + D N
Sbjct: 413 LLSRE-RMERAFKMFDKDGSGKISTKELFK-LFSQADSSIQMEELESIIE----QVDNNK 466
Query: 161 DQMISFDEFCKALE 174
D + F+EF + L+
Sbjct: 467 DGEVDFNEFVEMLQ 480
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDF 65
Query: 167 DEFCKALER----TDVEQKMSIRF 186
EF + R TD E+++ F
Sbjct: 66 PEFLTMMARKMKDTDSEEEIREAF 89
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++L AFK++D D + IS EL V+ N+ E+ + I EAD +GD I
Sbjct: 7 EEELIEAFKVFDRDGNGLISAAELRHVM-----TNLGEKLTDDEVDEMIREADIDGDGHI 61
Query: 165 SFDEFCKAL 173
+++EF + +
Sbjct: 62 NYEEFVRMM 70
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 PEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDF 66
Query: 167 DEFCKALER 175
EF + R
Sbjct: 67 PEFLTMMAR 75
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 PEFLTMMAR 74
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 PEFLTMMAR 74
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 PEFLTMMAR 74
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 101 LNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
L SRE +L+ AF+ +D DN IS EL + + +++ E S+ + E D+N
Sbjct: 414 LLSRE-RLERAFRXFDSDNSGKISSTELATIFGV---SDVDSETWKSV----LSEVDKNN 465
Query: 161 DQMISFDEFCKAL 173
D + FDEF + L
Sbjct: 466 DGEVDFDEFQQXL 478
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 PEFLTMMAR 74
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 67 HVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAIS 124
HVF F+ ++F++++ L + K N QKL++AF +YD+D + IS
Sbjct: 75 HVFRSFDSNLDGTLDFKEYVIALHX------TTAGKTN---QKLEWAFSLYDVDGNGTIS 125
Query: 125 RDELLAVLHMM 135
++E+L ++ +
Sbjct: 126 KNEVLEIVXAI 136
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 PEFLTMMAR 74
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++++ AF+++D D + IS EL V+ N+ E+ + I EAD +GD +
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 55
Query: 165 SFDEFCKAL 173
+++EF + +
Sbjct: 56 NYEEFVQMM 64
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 98 ENKLNSREQKLKFAFKMYDLDNDDAISRDEL---LAVLHMMVGAN----ISEEQLTSIAE 150
E +++ +E +L + FKM+D D ++ + EL + +H G+ +SE++L +I +
Sbjct: 11 EAEMSPQELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIID 69
Query: 151 RTILEADQNGDQMISFDEFCKALE 174
+ + D+N D I + EF K+L+
Sbjct: 70 GVLRDDDKNNDGYIDYAEFAKSLQ 93
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 102 NSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGD 161
+++E+ LK AFK++D D IS L V + G N+++E+L + I EAD++GD
Sbjct: 8 DTKEEILK-AFKLFDDDETGKISFKNLKRVAKEL-GENLTDEELQEM----IDEADRDGD 61
Query: 162 QMISFDEFCKALERT 176
+S EF + +++T
Sbjct: 62 GEVSEQEFLRIMKKT 76
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++++ AF+++D D + IS EL V+ N+ E+ + I EAD +GD +
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 58
Query: 165 SFDEFCKAL 173
+++EF + +
Sbjct: 59 NYEEFVQMM 67
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++++ AF+++D D + IS EL V+ N+ E+ + I EAD +GD +
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 58
Query: 165 SFDEFCKAL 173
+++EF + +
Sbjct: 59 NYEEFVQMM 67
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D D D I+ EL V+ + G N +E +L + I E D +G+ I F
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 PEFLNLMAR 74
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 100 KLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
K E++++ AF+++D D + IS EL V+ N+ E+ + I EAD +
Sbjct: 2 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADID 56
Query: 160 GDQMISFDEFCKAL 173
GD ++++EF + +
Sbjct: 57 GDGQVNYEEFVQMM 70
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 100 KLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
K E++++ AF+++D D + IS EL V+ N+ E+ + I EAD +
Sbjct: 3 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADID 57
Query: 160 GDQMISFDEFCKAL 173
GD ++++EF + +
Sbjct: 58 GDGQVNYEEFVQMM 71
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 33.9 bits (76), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++++ AF+++D D + IS EL V+ N+ E+ + I EAD +GD +
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 59
Query: 165 SFDEFCKAL 173
+++EF + +
Sbjct: 60 NYEEFVQMM 68
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 107 KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISF 166
+ K AF ++D DN+ +IS EL V+ + G + SE ++ + E D +G+ I F
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMN----EIDVDGNHQIEF 65
Query: 167 DEFCKALER 175
EF + R
Sbjct: 66 SEFLALMSR 74
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINPLGDRIVHVFFE---EGCSDR 77
+T QI F D+ + G++S + + L ++P + + E +G + +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDG-NHQ 62
Query: 78 VNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVG 137
+ F +F+ +++R + K N EQ+L AFK++D + D IS EL VL +G
Sbjct: 63 IEFSEFLALMSR--------QLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIG 113
Query: 138 ANISEEQL 145
+++ +L
Sbjct: 114 EKLTDAEL 121
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 106 QKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMIS 165
+ L+ AF+ +D D D I+ DEL + + G + +E+L ++ I EAD + D ++
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGL-GQPLPQEELDAM----IREADVDQDGRVN 60
Query: 166 FDEFCKAL 173
++EF + L
Sbjct: 61 YEEFARML 68
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 33.5 bits (75), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 21/168 (12%)
Query: 10 REEEIAQIQEETVTPN----QIERLYSRFTSLDRGDCGTLSREDFL-RIPELAINPLGDR 64
+E E+ +I + + +I L + F +LD + GTLS ++ L + ++ +
Sbjct: 35 KENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPD 94
Query: 65 IVHVF--FEEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDA 122
I V + S ++++ F+ K+ L +++ FK +D+D +
Sbjct: 95 IHQVLRDIDSNASGQIHYTDFLAATI-------DKQTYL--KKEVCLIPFKFFDIDGNGK 145
Query: 123 ISRDELLAVLHMMVGANISEEQLTSIAERTIL-EADQNGDQMISFDEF 169
IS +EL + G + E L A ++L E D NGD I F EF
Sbjct: 146 ISVEELKRIF----GRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEF 189
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 78 VNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRD---ELLAVLHM 134
++F F + ARF +E +Q+L+ AF++YD + + IS D E+LA L
Sbjct: 67 IDFDSFKIIGARFL----GEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELD- 121
Query: 135 MVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERTD 177
+S E L ++ I E D +G + F+EF + D
Sbjct: 122 ---ETLSSEDLDAM----IDEIDADGSGTVDFEEFMGVMTGGD 157
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 19/159 (11%)
Query: 21 TVTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINPLGDRIVHVFFE---EGCSD 76
+T QI F D+ + G++S + + L ++P + + E +G +
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDG-NH 61
Query: 77 RVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMV 136
++ F +F+ +++R + K N EQ+L AFK++D + D IS EL VL +
Sbjct: 62 QIEFSEFLALMSR--------QLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSI 112
Query: 137 GANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 175
G E+LT +L +G I+ +F L +
Sbjct: 113 G-----EKLTDAEVDDMLREVSDGSGEINIQQFAALLSK 146
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 33.1 bits (74), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 22 VTPNQIERLYSRFTSLDRGDCGTLSREDFLRIP-ELAINPLGDRIVHVFFE---EGCSDR 77
+T QI F D+ + G++S + + L ++P + + E +G + +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDG-NHQ 63
Query: 78 VNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVG 137
+ F +F+ +++R + K N EQ+L AFK++D + D IS EL VL +G
Sbjct: 64 IEFSEFLALMSR--------QLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIG 114
Query: 138 ANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 175
E+LT +L +G I+ +F L +
Sbjct: 115 -----EKLTDAEVDDMLREVSDGSGEINIQQFAALLSK 147
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 33.1 bits (74), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAV---LHMMVGAN----ISEEQLTSIAERTILEAD 157
+KL++ F +YD++ D I+++E++ + ++ M+G + E+ + + D
Sbjct: 88 HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMD 147
Query: 158 QNGDQMISFDEFCKALERTD 177
+N D +++ DEF ++ + D
Sbjct: 148 KNKDGIVTLDEFLESCQEDD 167
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 33.1 bits (74), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 112 FKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 170
FK +D + D IS EL L + +++ +++ R + E D +GD ISFDEF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTL--GSVTPDEV----RRMMAEIDTDGDGFISFDEFT 69
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSI 148
+Q+ K AF+++D DND+ ++ +EL V+ + GAN ++++++ I
Sbjct: 13 QQEYKEAFQLFDKDNDNKLTAEELGTVMRAL-GANPTKQKISEI 55
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSI-AERTILEADQNGDQM 163
E+++ AFK++D + D I DE ++ + EE LT E + EAD++G+ +
Sbjct: 7 EEEILRAFKVFDANGDGVIDFDEFKFIMQ-----KVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 164 ISFDEFCKALERT 176
I EF ++++
Sbjct: 62 IDIPEFMDLIKKS 74
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 98 ENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEAD 157
E+ E++L F+++D + D I +EL +L G ++ EE + E + ++D
Sbjct: 2 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA-TGEHVIEEDI----EDLMKDSD 56
Query: 158 QNGDQMISFDEFCKALE 174
+N D I FDEF K +E
Sbjct: 57 KNNDGRIDFDEFLKMME 73
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 94 KKSKENKLNSREQKLKFAFKMYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERT 152
K + E ++ + K AF ++ L +D +IS EL V+ M+ G N + E+L +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEEL----QEM 60
Query: 153 ILEADQNGDQMISFDEFCKALERT 176
I E D++G + FDEF + R+
Sbjct: 61 IDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 103 SREQKLKF--AFKMYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
+ EQK +F AF ++ L +D +IS EL V+ M+ G N + E+L + I E D++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEEL----QEMIDEVDED 67
Query: 160 GDQMISFDEFCKALERT 176
G + FDEF + R+
Sbjct: 68 GSGTVDFDEFLVMMVRS 84
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 101 LNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
+ E++L F+M+D + D I DEL +L G I+E+ + E + + D+N
Sbjct: 1 MGKSEEELSDLFRMFDKNADGYIDLDELKIMLQ-ATGETITEDDI----EELMKDGDKNN 55
Query: 161 DQMISFDEFCK 171
D I +DEF +
Sbjct: 56 DGRIDYDEFLE 66
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 103 SREQKLKF--AFKMYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERTILEADQN 159
+ EQK +F AF ++ L +D +IS EL V+ M+ G N + E+L + I E D++
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRML-GQNPTPEEL----QEMIDEVDED 67
Query: 160 GDQMISFDEFCKALERT 176
G + FDEF + R+
Sbjct: 68 GSGTVDFDEFLVMMVRS 84
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 108 LKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFD 167
LK +K+ D+D D ++++E+ + + + +AE+ +++AD NGD I+ +
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFF--------KKHGIEKVAEQ-VMKADANGDGYITLE 57
Query: 168 EF 169
EF
Sbjct: 58 EF 59
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 106 QKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMIS 165
++++ AFK++D D + IS+ EL + + G +E +L I +R D +GD +
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRL----DMDGDGQVD 90
Query: 166 FDEFCKAL 173
F+EF L
Sbjct: 91 FEEFVTLL 98
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 94 KKSKENKLNSREQKLKFAFKMYDLDNDDA-ISRDELLAVLHMMVGANISEEQLTSIAERT 152
K + E + ++ + K AF ++ D +D IS EL V+ M+ G N + E+L +
Sbjct: 6 KAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRML-GQNPTPEEL----QEM 60
Query: 153 ILEADQNGDQMISFDEF 169
I E D++G + FDEF
Sbjct: 61 IDEVDEDGSGTVDFDEF 77
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 102 NSREQ-------KLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTIL 154
N+R+Q + K AF ++D D D I+ +L V+ + G N +E +L + I
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSL-GQNPTEAELQDM----IN 354
Query: 155 EADQNGDQMISFDEFCKALER----TDVEQKM 182
E +G+ I F +F + R TD E+++
Sbjct: 355 EVGADGNGTIDFPQFLTMMARKMKDTDSEEEI 386
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Query: 108 LKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFD 167
LK +K+ D+D D ++++E+ + + + +AE+ +++AD NGD I+ +
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFF--------KKHGIEKVAEQ-VMKADANGDGYITLE 127
Query: 168 EFC 170
EF
Sbjct: 128 EFL 130
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 94 KKSKENKLNSREQKLKFAFKMYDLDNDDA-ISRDELLAVLHMMVGANISEEQLTSIAERT 152
K + E ++ + K AF ++ L +D IS EL V+ M+ G N + E+L +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRML-GQNPTPEEL----QEM 60
Query: 153 ILEADQNGDQMISFDEF 169
I E D++G + FDEF
Sbjct: 61 IDEVDEDGSGTVDFDEF 77
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 9/63 (14%)
Query: 108 LKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFD 167
LK +K+ D+D D ++++E+ + + + +AE+ +++AD NGD I+ +
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFF--------KKHGIEKVAEQ-VMKADANGDGYITLE 127
Query: 168 EFC 170
EF
Sbjct: 128 EFL 130
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++++ AF++ D D + IS EL V+ N+ E+ + I EAD +GD +
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 165 SFDEFCKAL 173
+++EF + +
Sbjct: 83 NYEEFVQMM 91
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 94 KKSKENKLNSREQKLKFAFKMYDLDNDDA-ISRDELLAVLHMMVGANISEEQLTSIAERT 152
K + E ++ + K AF ++ D +D IS EL V+ M+ G N + E+L +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRML-GQNPTPEEL----QEM 60
Query: 153 ILEADQNGDQMISFDEF 169
I E D++G + FDEF
Sbjct: 61 IDEVDEDGSGTVDFDEF 77
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 97 KENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA 156
K++ E++L F+M+D + D I +EL +L G I+E+ + E + +
Sbjct: 6 KDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDI----EELMKDG 60
Query: 157 DQNGDQMISFDEF 169
D+N D I +DEF
Sbjct: 61 DKNNDGRIDYDEF 73
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++++ AF+++D D + IS +L V+ N+ E+ + I EAD +GD +
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQV 60
Query: 165 SFDEFCKAL 173
++++F + +
Sbjct: 61 NYEDFVQMM 69
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 94 KKSKENKLNSREQKLKFAFKMYDLDNDDA-ISRDELLAVLHMMVGANISEEQLTSIAERT 152
K + E ++ + K AF ++ L +D IS EL V+ M+ G N + E+L +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRML-GQNPTPEEL----QEM 60
Query: 153 ILEADQNGDQMISFDEFCKALER 175
I E D++G + FDE+ + R
Sbjct: 61 IDEVDEDGSGTVDFDEWLVMMAR 83
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 97 KENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA 156
K++ E++L F+M+D + D I +EL +L G I+E+ + E + +
Sbjct: 1 KDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDI----EELMKDG 55
Query: 157 DQNGDQMISFDEFCK 171
D+N D I +DEF +
Sbjct: 56 DKNNDGRIDYDEFLE 70
>pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f
Mutant From Thermus Thermophilus
pdb|2D5B|A Chain A, Crystal Structure Of Thermus Thermophilus Methionyl Trna
Synthetase Y225f Mutant Obtained In The Presence Of
Peg6000
Length = 500
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 91 RPIKKSKENKLNSREQKLKFAFKMYDLDNDDAI----SRDELLAVLHMMVG-ANISEEQL 145
RP+++ KE R +K + + Y +N D I R+E+LA+L +G +IS +
Sbjct: 149 RPVERRKEGNYFFRMEKYRPWLQEYIQENPDLIRPEGYRNEVLAMLAEPIGDLSISRPK- 207
Query: 146 TSIAERTILEADQNGDQMISFDEFCKALERTDVEQKMSIR 185
+ + L D+N + FD + D + + R
Sbjct: 208 SRVPWGIPLPWDENHVTFVWFDALLNYVSALDYPEGEAYR 247
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 112 FKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDE--- 168
FK +D + D IS EL L + + E Q R + E D +GD I F+E
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTSADEVQ------RMMAEIDTDGDGFIDFNEFIS 61
Query: 169 FCKA 172
FC A
Sbjct: 62 FCNA 65
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 94 KKSKENKLNSREQKLKFAFKMYDLDNDDA-ISRDELLAVLHMMVGANISEEQLTSIAERT 152
K + E ++ + K AF ++ L +D IS EL V+ M+ G N + E+L +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRML-GQNPTPEEL----QEM 60
Query: 153 ILEADQNGDQMISFDEF 169
I E D++G + FDE+
Sbjct: 61 IDEVDEDGSGTVDFDEW 77
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 112 FKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDE--- 168
FK +D + D IS EL L + + E Q R + E D +GD I F+E
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTSADEVQ------RMMAEIDTDGDGFIDFNEFIS 62
Query: 169 FCKA 172
FC A
Sbjct: 63 FCNA 66
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++L F+M+D + D I +EL +L G I+E+ + E + + D+N D I
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQA-TGETITEDDI----EELMKDGDKNNDGRI 60
Query: 165 SFDEFCK 171
+DEF +
Sbjct: 61 DYDEFLE 67
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 106 QKLKFAFKMYDLDNDDA--ISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQM 163
+++K AF+++ D IS++EL V+ + G ++ + S + I E D+NGD
Sbjct: 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTL-GPSLL--KGMSTLDEMIEEVDKNGDGE 61
Query: 164 ISFDEFCKALER 175
+SF+EF +++
Sbjct: 62 VSFEEFLVMMKK 73
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++L F+M+D + D I +EL +L G I+E+ + E + + D+N D I
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQA-TGETITEDDI----EELMKDGDKNNDGRI 58
Query: 165 SFDEFCK 171
+DEF +
Sbjct: 59 DYDEFLE 65
>pdb|1K1D|A Chain A, Crystal Structure Of D-Hydantoinase
pdb|1K1D|B Chain B, Crystal Structure Of D-Hydantoinase
pdb|1K1D|C Chain C, Crystal Structure Of D-Hydantoinase
pdb|1K1D|D Chain D, Crystal Structure Of D-Hydantoinase
pdb|1K1D|E Chain E, Crystal Structure Of D-Hydantoinase
pdb|1K1D|F Chain F, Crystal Structure Of D-Hydantoinase
pdb|1K1D|G Chain G, Crystal Structure Of D-Hydantoinase
pdb|1K1D|H Chain H, Crystal Structure Of D-Hydantoinase
Length = 460
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 9 LREEEIAQIQEETVTPNQIERLYSRFTSLDRGDCGTLSREDFLRIPELAINPLGDRIVHV 68
LRE+ ++ + Q++ L S S D L R DF +IP P+ + V +
Sbjct: 291 LREKWHQEVLWNALKNGQLQTLGSDQCSFDFKGQKELGRGDFTKIPNGG--PIIEDRVSI 348
Query: 69 FFEEGC-SDRVNFRQFMQVLA 88
F EG R+ QF+ +++
Sbjct: 349 LFSEGVKKGRITLNQFVDIVS 369
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 24 PNQIERLYSRFTSLDRGDCGTLSREDFLRI----PELAINPLGDRIVHVFFEEGCSDRVN 79
P+Q L++ F +D+ G +S + + NP+ R + F+ VN
Sbjct: 23 PDQ-SFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 81
Query: 80 FRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGAN 139
F +F V + F+ YD DN I ++EL L G
Sbjct: 82 FSEFTGVWKYITDWQN---------------VFRTYDRDNSGMIDKNELKQALSGF-GYR 125
Query: 140 ISEEQLTSIAERTILEADQNGDQMISFDEF---CKALER-TDV 178
+S++ + I + D+ G I+FD+F C L+R TD+
Sbjct: 126 LSDQ----FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI 164
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 105 EQKLKFAFKMYDLDNDDAISRD---ELLAVLHMMVGANISEEQLTSIAERTILEADQNGD 161
+Q+L+ AF++YD + + IS D E+LA L +S E L ++ I E D +G
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELD----ETLSSEDLDAM----IDEIDADGS 53
Query: 162 QMISFDEFCKALERTD 177
+ F+EF + D
Sbjct: 54 GTVDFEEFMGVMTGGD 69
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 24 PNQIERLYSRFTSLDRGDCGTLSREDFLRI----PELAINPLGDRIVHVFFEEGCSDRVN 79
P+Q L++ F +D+ G +S + + NP+ R + F+ VN
Sbjct: 4 PDQ-SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 80 FRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGAN 139
F +F V + F+ YD DN I ++EL L G
Sbjct: 63 FSEFTGVWKYITDWQN---------------VFRTYDRDNSGMIDKNELKQALSGF-GYR 106
Query: 140 ISEEQLTSIAERTILEADQNGDQMISFDEF---CKALER-TDV 178
+S++ + I + D+ G I+FD+F C L+R TD+
Sbjct: 107 LSDQ----FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI 145
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 30/157 (19%)
Query: 30 LYSRFTSLDRGDCGTLSREDFLRI----PELAINPLGDRIVHVFFEEGCSDRVNFRQFMQ 85
L++ F +D+ G +S + + NP+ R + F+ VNF +F
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 86 VLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQL 145
V + F+ YD DN I ++EL L G +S++
Sbjct: 66 VWKYITDWQN---------------VFRTYDRDNSGMIDKNELKQALS---GYRLSDQ-- 105
Query: 146 TSIAERTILEADQNGDQMISFDEF---CKALER-TDV 178
+ I + D+ G I+FD+F C L+R TD+
Sbjct: 106 --FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI 140
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 28/157 (17%)
Query: 30 LYSRFTSLDRGDCGTLSREDFLRI----PELAINPLGDRIVHVFFEEGCSDRVNFRQFMQ 85
L++ F +D+ G +S + + NP+ R + F+ VNF +F
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 86 VLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQL 145
V + F+ YD DN I ++EL L G +S++
Sbjct: 66 VWKYITDWQN---------------VFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQ-- 107
Query: 146 TSIAERTILEADQNGDQMISFDEF---CKALER-TDV 178
+ I + D+ G I+FD+F C L+R TD+
Sbjct: 108 --FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI 142
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 28/157 (17%)
Query: 30 LYSRFTSLDRGDCGTLSREDFLRI----PELAINPLGDRIVHVFFEEGCSDRVNFRQFMQ 85
L++ F +D+ G +S + + NP+ R + F+ VNF +F
Sbjct: 5 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 64
Query: 86 VLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQL 145
V + F+ YD DN I ++EL L G +S++
Sbjct: 65 VWKYITDWQN---------------VFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQ-- 106
Query: 146 TSIAERTILEADQNGDQMISFDEF---CKALER-TDV 178
+ I + D+ G I+FD+F C L+R TD+
Sbjct: 107 --FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI 141
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 28/157 (17%)
Query: 30 LYSRFTSLDRGDCGTLSREDFLRI----PELAINPLGDRIVHVFFEEGCSDRVNFRQFMQ 85
L++ F +D+ G +S + + NP+ R + F+ VNF +F
Sbjct: 27 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 86
Query: 86 VLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQL 145
V + F+ YD DN I ++EL L G +S++
Sbjct: 87 VWKYITDWQN---------------VFRTYDRDNSGMIDKNELKQALSGF-GYRLSDQ-- 128
Query: 146 TSIAERTILEADQNGDQMISFDEF---CKALER-TDV 178
+ I + D+ G I+FD+F C L+R TD+
Sbjct: 129 --FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI 163
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Query: 24 PNQIERLYSRFTSLDRGDCGTLSREDFLRI----PELAINPLGDRIVHVFFEEGCSDRVN 79
P+Q L++ F +D+ G +S + + NP+ R + F+ VN
Sbjct: 4 PDQ-SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 80 FRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGAN 139
F +F V + F+ YD DN I ++EL L G
Sbjct: 63 FSEFTGVWKYITDWQN---------------VFRTYDRDNSGMIDKNELKQALS-GAGYR 106
Query: 140 ISEEQLTSIAERTILEADQNGDQMISFDEF---CKALER-TDV 178
+S++ + I + D+ G I+FD+F C L+R TD+
Sbjct: 107 LSDQ----FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDI 145
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 94 KKSKENKLNSREQKLKFAFKMYDLDNDDA-ISRDELLAVLHMMVGANISEEQLTSIAERT 152
K + E ++ + K AF ++ +D IS EL V+ M+ G N + E+L +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRML-GQNPTPEEL----QEM 60
Query: 153 ILEADQNGDQMISFDEF 169
I E D++G + FDEF
Sbjct: 61 IDEVDEDGSGTVDFDEF 77
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 103 SREQKLKF--AFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNG 160
+ EQK +F AF ++ L +D + L + +G N + E+L + I E D++G
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEEL----QEXIDEVDEDG 68
Query: 161 DQMISFDEF 169
+ FDEF
Sbjct: 69 SGTVDFDEF 77
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 112 FKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 170
FK +D + D IS EL L + +I+ +++ + + E D +GD ISF EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTL--GSITPDEVKHM----MAEIDTDGDGFISFQEFT 67
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 39/123 (31%)
Query: 78 VNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDEL--------- 128
V++ + ++ RPIK EQ L+ FK D+D + I E
Sbjct: 17 VSYEEVKAFVSSKRPIK---------NEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAVKE 67
Query: 129 ---------LAVLHMMVGAN----ISEEQLTSIAER--------TILEADQNGDQMISFD 167
L +L+ ++ A+ +++E++T+ ++ I++AD NGD I+ +
Sbjct: 68 QDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMKADANGDGYITLE 127
Query: 168 EFC 170
EF
Sbjct: 128 EFL 130
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 15/98 (15%)
Query: 74 CSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFAFKMYDLDNDDAISRDELLAVLH 133
+D + ++F Q++ KKS ++ +K F + D D D I DEL ++L
Sbjct: 20 AADSFDHKKFFQMVG---LKKKSADD--------VKKVFHILDKDKDGFIDEDELGSILK 68
Query: 134 MMVGANISEEQLTSIAERTILEA-DQNGDQMISFDEFC 170
G + L++ +T++ A D++GD I +EF
Sbjct: 69 ---GFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFS 103
>pdb|1DK8|A Chain A, Crystal Structure Of The Rgs-Homologous Domain Of Axin
Length = 147
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 71 EEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFA---FKMYDLDNDDAISRDE 127
+EGC+D ++ F FR ++ N+ E++LK A ++ Y LDN+ +SR
Sbjct: 35 QEGCADLLD---FWFACTGFRKLEPCDSNE----EKRLKLARAIYRKYILDNNGIVSRQT 87
Query: 128 LLAVLHMMVGA 138
A + G
Sbjct: 88 KPATKSFIKGC 98
>pdb|1FI6|A Chain A, Solution Structure Of The Reps1 Eh Domain
Length = 92
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 80 FRQFMQVLARFRPIKKSKENKLNSREQKLKFA--FKMYDLDNDDAISRDELLAVLHMMVG 137
F+ L F P +KE S+ L+ + +++ D D D A++ DE A H++V
Sbjct: 15 FKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVA 74
>pdb|1EMU|A Chain A, Structure Of The Axin Rgs-Homologous Domain In Complex
With A Samp Repeat From Apc
Length = 132
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 71 EEGCSDRVNFRQFMQVLARFRPIKKSKENKLNSREQKLKFA---FKMYDLDNDDAISRDE 127
+EGC+D ++ F FR ++ N+ E++LK A ++ Y LDN+ +SR
Sbjct: 29 QEGCADLLD---FWFACTGFRKLEPCDSNE----EKRLKLARAIYRKYILDNNGIVSRQT 81
Query: 128 LLAVLHMMVGA 138
A + G
Sbjct: 82 KPATKSFIKGC 92
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 108 LKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTIL-EADQNGDQMISF 166
+K AF + D D I DEL L + S LT + L + D++GD MI
Sbjct: 43 VKKAFYVIDQDKSGFIEEDELKLFLQNF---SPSARALTDAETKAFLADGDKDGDGMIGV 99
Query: 167 DEFC 170
DEF
Sbjct: 100 DEFA 103
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 105 EQKLKFAFKMYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMI 164
E++LK AF++ D + I D L +L + G ++E+++ E I E D +G +
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSL-GDELTEDEI----ENMIAETDTDGSGTV 60
Query: 165 SFDEF 169
++EF
Sbjct: 61 DYEEF 65
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,761,064
Number of Sequences: 62578
Number of extensions: 175375
Number of successful extensions: 948
Number of sequences better than 100.0: 245
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 660
Number of HSP's gapped (non-prelim): 286
length of query: 188
length of database: 14,973,337
effective HSP length: 93
effective length of query: 95
effective length of database: 9,153,583
effective search space: 869590385
effective search space used: 869590385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)