BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17264
(75 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 112 bits (280), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YDLD DD ISRDELL VL MMVG NIS+EQL SIA+RTI EADQ+GD ISF EF K L
Sbjct: 121 LYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
Query: 61 ERTDVEQKMSIRFL 74
E+ DVEQKMSIRFL
Sbjct: 181 EKVDVEQKMSIRFL 194
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YDLD D+ ISRDELL VL MMVG NIS+EQL SIA+RTI EADQ+GD ISF EF K L
Sbjct: 121 LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
Query: 61 ERTDVEQKMSIRFL 74
E+ DVEQKMSIRFL
Sbjct: 181 EKVDVEQKMSIRFL 194
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 94.7 bits (234), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YDLD D ISR E+L VL +MVG ++EEQL +IA+RT+ EAD++GD +SF EF K+L
Sbjct: 122 LYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
Query: 61 ERTDVEQKMSIRFL 74
E+ DVEQKMSIR L
Sbjct: 182 EKMDVEQKMSIRIL 195
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YD+D D IS EL VL MMVG N+ + QL I ++TI+ AD++GD ISF+EFC +
Sbjct: 84 IYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 143
Query: 61 ERTDVEQKMSI 71
D+ +KM +
Sbjct: 144 GGLDIHKKMVV 154
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YD+D D IS EL VL MMVG N+ + QL I ++TI+ AD++GD ISF+EFC +
Sbjct: 83 IYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 142
Query: 61 ERTDVEQKMSI 71
D+ +KM +
Sbjct: 143 GGLDIHKKMVV 153
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YD+D D IS EL VL MMVG N+ + QL I ++TI+ AD++GD ISF+EFC +
Sbjct: 98 IYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
Query: 61 ERTDVEQKMSI 71
D+ +KM +
Sbjct: 158 GGLDIHKKMVV 168
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 72.4 bits (176), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YD+D D IS EL VL MMVG N+ + QL I ++TI+ AD++GD ISF+EFC +
Sbjct: 97 IYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
Query: 61 ERTDVEQKMSI 71
D+ +KM +
Sbjct: 157 GGLDIHKKMVV 167
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 1 MYDLDNDDAISRDELLAV---LHMMVGANISEEQLTSIAERTILE----ADQNGDQMISF 53
+YDLDN+ IS DE+L + ++ MVG+ + + E+ + + D+N D ++
Sbjct: 107 LYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTL 166
Query: 54 DEFCKALER 62
+EFC+ +R
Sbjct: 167 EEFCEGSKR 175
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.8 bits (81), Expect = 0.006, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 15/66 (22%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERT----ILEADQNGDQMISFDEF 56
++D D I+++EL + LTSI+E+T + EADQN D MI FDEF
Sbjct: 443 LFDTDKSGKITKEELANLF-----------GLTSISEKTWNDVLGEADQNKDNMIDFDEF 491
Query: 57 CKALER 62
+ +
Sbjct: 492 VSMMHK 497
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 1 MYDLDNDDAISRDELLAVL-HMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
++D+DND I+ EL VL + NI+E + + ++ I E D+NGD I F EF +
Sbjct: 133 VFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQV-KKMIREVDKNGDGKIDFYEFSEM 191
Query: 60 LERT 63
++ T
Sbjct: 192 MKLT 195
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F+EF +
Sbjct: 17 MFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDFEEFLVMM 71
Query: 61 ER 62
R
Sbjct: 72 VR 73
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MYDLDNDDAISRDELLAV---LHMMVGANI--SEEQLTS--IAERTILEADQNGDQMISF 53
+YDLDND I+R+E+L + ++ MVG + EE+ T +R D+N D ++
Sbjct: 107 LYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTL 166
Query: 54 DEF 56
EF
Sbjct: 167 QEF 169
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F+EF +
Sbjct: 28 MFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDFEEFLVMM 82
Query: 61 ER 62
R
Sbjct: 83 VR 84
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F+EF
Sbjct: 28 MFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDFEEF 78
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D I +EL +L G +++EE + E + ++D+N D I FDEF K +
Sbjct: 104 IFDKNADGFIDIEELGEILRA-TGEHVTEEDI----EDLMKDSDKNNDGRIDFDEFLKMM 158
Query: 61 E 61
E
Sbjct: 159 E 159
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F+EF
Sbjct: 25 MFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDFEEF 75
Score = 28.5 bits (62), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D I +EL +L G +++EE + E + ++D+N D I FDEF K +
Sbjct: 101 IFDKNADGFIDIEELGEILRA-TGEHVTEEDI----EDLMKDSDKNNDGRIDFDEFLKMM 155
Query: 61 E 61
E
Sbjct: 156 E 156
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F+EF
Sbjct: 28 MFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDFEEF 78
Score = 28.5 bits (62), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D I +EL +L G +++EE + E + ++D+N D I FDEF K +
Sbjct: 104 IFDKNADGFIDIEELGEILRA-TGEHVTEEDI----EDLMKDSDKNNDGRIDFDEFLKMM 158
Query: 61 E 61
E
Sbjct: 159 E 159
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F+EF
Sbjct: 28 MFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDFEEF 78
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D I +EL +L G ++ EE + E + ++D+N D I FDEF K +
Sbjct: 104 IFDKNADGFIDIEELGEILRA-TGEHVIEEDI----EDLMKDSDKNNDGRIDFDEFLKMM 158
Query: 61 E 61
E
Sbjct: 159 E 159
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C
In The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
M+D D IS EL V+ M+ G N ++E+L +I E E D++G I F+EF
Sbjct: 28 MFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDFEEF 78
Score = 28.5 bits (62), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D I +EL +L G +++EE + E + ++D+N D I FDEF K +
Sbjct: 104 IFDKNADGFIDIEELGEILRA-TGEHVTEEDI----EDLMKDSDKNNDGRIDFDEFLKMM 158
Query: 61 E 61
E
Sbjct: 159 E 159
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF---- 56
++D D D I+ +EL V+ + N +EE+L + I E D +G+ I FDEF
Sbjct: 18 LFDKDGDGCITVEELATVIRSL-DQNPTEEELQDM----ISEVDADGNGTIEFDEFLSLM 72
Query: 57 CKALERTDVEQKMSIRF 73
K ++ TD E+++ F
Sbjct: 73 AKKVKDTDAEEELKEAF 89
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL H+M+ N+ E+ E+ I EAD +GD ++++EF K +
Sbjct: 91 VFDKDQNGYISASELR---HVMI--NLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 145
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTS--IAERTILEADQNGDQMISFDEFCK 58
+YD+D + I R ELL ++ + N E +T+ + D NGD +S +EF +
Sbjct: 96 LYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFME 155
Query: 59 ALERTDV 65
+++ +V
Sbjct: 156 GVQKDEV 162
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D DN I+ +L V + G N++EE+L + I EAD+N D I DEF + +
Sbjct: 109 LFDDDNSGTITIKDLRRVAKEL-GENLTEEELQEM----IAEADRNDDNEIDEDEFIRIM 163
Query: 61 ERT 63
++T
Sbjct: 164 KKT 166
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 1 MYDLDNDDAISRDELLAVL---HMMVGAN----ISEEQLTSIAERTILEADQNGDQMISF 53
+YD++ D I+++E+LA++ + M+G + + E+ ER + D+N D +++
Sbjct: 173 LYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTI 232
Query: 54 DEFCKALER 62
DEF + ++
Sbjct: 233 DEFLETCQK 241
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF---- 56
++D D D I+ EL V+ + G N +E +L + I E D +GD I F EF
Sbjct: 319 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDFPEFLTMM 373
Query: 57 CKALERTDVEQKMSIRF 73
+ ++ TD E+++ F
Sbjct: 374 ARKMKYTDSEEEIREAF 390
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 392 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D DN I+ +L V + G N++EE+L + I EAD+N D I DEF + +
Sbjct: 17 LFDDDNSGTITIKDLRRVAKEL-GENLTEEELQEM----IAEADRNDDNEIDEDEFIRIM 71
Query: 61 ERT 63
++T
Sbjct: 72 KKT 74
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D D I+ EL V+ + G N +E +L + I E D +GD I F EF +
Sbjct: 318 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDFPEFLTMM 372
Query: 61 ER----TDVEQKMSIRF 73
R TD E+++ F
Sbjct: 373 ARKMKDTDSEEEIREAF 389
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 391 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 32.7 bits (73), Expect = 0.058, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D D I+ EL V+ + G N +E +L + I E D +GD I F EF +
Sbjct: 318 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDFPEFLTMM 372
Query: 61 ER----TDVEQKMSIRF 73
R TD E+++ F
Sbjct: 373 ARKMKYTDSEEEIREAF 389
Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 391 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+D + D IS EL + ++G + + I I + D NGD + F+EF + +
Sbjct: 16 FDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI----IRDVDLNGDGRVDFEEFVRMMS 71
Query: 62 R 62
R
Sbjct: 72 R 72
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 1 MYDLDNDDAISRDELLAVL---HMMVGAN----ISEEQLTSIAERTILEADQNGDQMISF 53
+YD++ D I+++E+LA++ + M+G + + E+ ER + D+N D +++
Sbjct: 17 LYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVVTI 76
Query: 54 DEFCKALER 62
+EF +A ++
Sbjct: 77 EEFLEACQK 85
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 32.3 bits (72), Expect = 0.070, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D D I+ EL V+ + G N +E +L + I E D +GD I F EF +
Sbjct: 318 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDFPEFLTMM 372
Query: 61 ER----TDVEQKMSIRF 73
R TD E+++ F
Sbjct: 373 ARKMKYTDSEEEIREAF 389
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 391 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D D IS L V+ M+ G N ++E+L +I E E D++G I F+EF +
Sbjct: 28 MFDADGGGDISTKALGTVMRML-GQNPTKEELDAIIE----EVDEDGSGTIDFEEFLVMM 82
Query: 61 ER 62
R
Sbjct: 83 VR 84
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
M+D D IS EL V+ M+ G N ++ +L +I I E D++G I F+EF
Sbjct: 28 MFDADGGGDISTKELGTVMRML-GQNPTKCELDAI----ICEVDEDGSGTIDFEEF 78
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D D I+ EL V+ + G N +E +L + I E D +GD I F EF +
Sbjct: 18 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDFPEFLTMM 72
Query: 61 ER 62
R
Sbjct: 73 AR 74
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+D + D IS EL + ++G + + I I + D NGD + F+EF + +
Sbjct: 111 FDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI----IRDVDLNGDGRVDFEEFVRMMS 166
Query: 62 R 62
R
Sbjct: 167 R 167
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 32.0 bits (71), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF---- 56
++D D D I+ EL V+ + G N +E +L + I E D +GD I F EF
Sbjct: 310 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDFPEFLIMM 364
Query: 57 CKALERTDVEQKMSIRF 73
+ ++ TD E+++ F
Sbjct: 365 ARKMKDTDSEEEIREAF 381
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 383 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D D I+ EL V+ + G N +E +L + I E D +GD I F EF +
Sbjct: 18 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGDGTIDFPEFLTMM 72
Query: 61 ER----TDVEQKMSIRF 73
R TD E+++ F
Sbjct: 73 ARKMKDTDSEEEIREAF 89
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 91 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 145
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.0 bits (71), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+D + D IS EL + ++G + + I I + D NGD + F+EF + +
Sbjct: 97 FDTNGDGEISTSELREAMRKLLGHQVGHRDIEEI----IRDVDLNGDGRVDFEEFVRMMS 152
Query: 62 R 62
R
Sbjct: 153 R 153
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.0 bits (71), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+D + D IS EL + ++G + + I I + D NGD + F+EF + +
Sbjct: 97 FDTNGDGEISTSELREAMRALLGHQVGHRDIEEI----IRDVDLNGDGRVDFEEFVRMMS 152
Query: 62 R 62
R
Sbjct: 153 R 153
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MYDLDNDDAISRDELLAVLH-MMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
++D+DND I+ EL +L+ NI++ + + +R I + D+N D I F EF +
Sbjct: 130 VFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRV-KRMIRDVDKNNDGKIDFHEFSEM 188
Query: 60 LE 61
++
Sbjct: 189 MK 190
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 12/81 (14%)
Query: 1 MYDLDNDDAISRDELLAV------LHMMVGANISEEQ----LTS--IAERTILEADQNGD 48
+YD D + I R ELL + L + EQ LT + +R L D+NGD
Sbjct: 103 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGD 162
Query: 49 QMISFDEFCKALERTDVEQKM 69
+S +EF + R KM
Sbjct: 163 GQLSLNEFVEGARRDKWVMKM 183
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL H+M+ N+ E+ E+ I EAD +GD ++++EF K +
Sbjct: 17 VFDKDQNGYISASELR---HVMI--NLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
++D D D IS EL V+ + +G +++E++ + I EAD +GD MI+++EF
Sbjct: 91 IFDRDGDGFISPAELRFVM-INLGEKVTDEEIDEM----IREADFDGDGMINYEEFV 142
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 16 LAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC----KALERTDVEQKMSI 71
L L +G N +E +L + I EA+ N + ++F EFC K + TD E++M
Sbjct: 32 LGTLMRTLGQNPTEAELQDL----IAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMRE 87
Query: 72 RF 73
F
Sbjct: 88 AF 89
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL H+M+ N+ E+ E+ I EAD +GD ++++EF K +
Sbjct: 12 VFDKDQNGYISASELR---HVMI--NLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment
Of Troponin I
Length = 159
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
M+D D IS EL V+ M+ G ++E+L +I E E D++G I F+EF
Sbjct: 25 MFDADGGGDISVKELGTVMRML-GQTPTKEELDAIIE----EVDEDGSGTIDFEEF 75
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D I +EL + G ++++E++ S+ + + D+N D I FDEF K +
Sbjct: 101 IFDRNADGYIDAEELAEIFRA-SGEHVTDEEIESL----MKDGDKNNDGRIDFDEFLKMM 155
Query: 61 E 61
E
Sbjct: 156 E 156
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
M+D D IS EL V+ M+ G ++E+L +I E E D++G I F+EF
Sbjct: 25 MFDADGGGDISVKELGTVMRML-GQTPTKEELDAIIE----EVDEDGSGTIDFEEFL 76
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D I +EL + G ++++E++ S+ + + D+N D I FDEF K +
Sbjct: 101 IFDRNADGYIDAEELAEIFRA-SGEHVTDEEIESL----MKDGDKNNDGRIDFDEFLKMM 155
Query: 61 E 61
E
Sbjct: 156 E 156
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
++D D D I+ +EL V+ + N +EE+L + I E D +G+ I FDEF
Sbjct: 18 LFDKDGDGCITVEELATVIRSL-DQNPTEEELQDM----ISEVDADGNGTIEFDEF 68
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
++D D D I+ +EL V+ + N +EE+L + I E D +G+ I FDEF
Sbjct: 18 LFDKDGDGCITVEELATVIRSL-DQNPTEEELQDM----ISEVDADGNGTIEFDEF 68
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF---- 56
++D DN+ +IS EL V+ + G + SE ++ + E D +G+ I F EF
Sbjct: 19 LFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMN----EIDVDGNHQIEFSEFLALM 73
Query: 57 CKALERTDVEQKM 69
+ L+ D EQ++
Sbjct: 74 SRQLKSNDSEQEL 86
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 14/72 (19%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D+D + I E LA++ + +N SE++L LEA D+NGD +IS E
Sbjct: 57 DVDGNHQIEFSEFLALMSRQLKSNDSEQEL--------LEAFKVFDKNGDGLISAAELKH 108
Query: 59 ALERTDVEQKMS 70
L T + +K++
Sbjct: 109 VL--TSIGEKLT 118
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 63
D +IS EL V+ M+ G N + E+L + I E D++G + FDEF + R+
Sbjct: 33 DGSISTKELGKVMRML-GQNPTPEEL----QEMIDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 63
D +IS EL V+ M+ G N + E+L + I E D++G + FDEF + R+
Sbjct: 33 DGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 63
D +IS EL V+ M+ G N + E+L + I E D++G + FDEF + R+
Sbjct: 33 DGSISTKELGKVMRML-GQNPTPEEL----QEMIDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 1 MYDLDNDDAISRDELLAV---LHMMVGANIS---EEQLTSIAERTILE-ADQNGDQMISF 53
+YDL++D I+ DE+L + ++ M+G+ ++ +E + + I + D+N D I+
Sbjct: 107 LYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITL 166
Query: 54 DEF 56
DEF
Sbjct: 167 DEF 169
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD I++DEF K +
Sbjct: 92 VFDKDQNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADVDGDGQINYDEFVKVM 146
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 63
D +IS EL V+ M+ G N + E+L + I E D++G + FDEF + R+
Sbjct: 33 DGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEFLVMMVRS 84
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
M+D + D I DEL +L G I+E+ + E + + D+N D I +DEF +
Sbjct: 103 MWDKNADGYIDLDELKIMLQA-TGETITEDDI----EELMKDGDKNNDGRIDYDEFLE 155
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 63
D +IS EL V+ M+ G N + E+L + I E D++G + FDEF + R+
Sbjct: 33 DGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEFLVMMVRS 84
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFD---EFC 57
M+D + D I DEL +L G I+E+ + E + + D+N D I +D EF
Sbjct: 103 MFDKNADGYIDLDELKIMLQA-TGETITEDDI----EELMKDGDKNNDGRIDYDEWLEFM 157
Query: 58 KALE 61
K +E
Sbjct: 158 KGVE 161
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF---- 56
++D DN+ +IS EL V+ + G + SE ++ + + E D +G+ I F EF
Sbjct: 18 LFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDL----MNEIDVDGNHQIEFSEFLALM 72
Query: 57 CKALERTDVEQKM 69
+ L+ D EQ++
Sbjct: 73 SRQLKSNDSEQEL 85
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 14/72 (19%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D+D + I E LA++ + +N SE++L LEA D+NGD +IS E
Sbjct: 56 DVDGNHQIEFSEFLALMSRQLKSNDSEQEL--------LEAFKVFDKNGDGLISAAELKH 107
Query: 59 ALERTDVEQKMS 70
L T + +K++
Sbjct: 108 VL--TSIGEKLT 117
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
1 Structure
Length = 161
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 63
D +IS EL V+ M+ G N + E+L + I E D++G + FDEF + R+
Sbjct: 33 DGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEFLVMMVRS 84
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
M+D + D I +EL +L G I+E+ + E + + D+N D I +DEF +
Sbjct: 103 MFDKNADGYIDLEELKIMLQA-TGETITEDDI----EELMKDGDKNNDGRIDYDEFLE 155
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 63
D +IS EL V+ M+ G N + E+L + I E D++G + FDEF + R+
Sbjct: 33 DGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 63
D +IS EL V+ M+ G N + E+L + I E D++G + FDEF + R+
Sbjct: 33 DGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERT 63
D +IS EL V+ M+ G N + E+L + I E D++G + FDEF + R+
Sbjct: 33 DGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF---- 56
++D DN+ +IS EL V+ + G + SE ++ + + E D +G+ I F EF
Sbjct: 18 LFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDL----MNEIDVDGNHQIEFSEFLALM 72
Query: 57 CKALERTDVEQKM 69
+ L+ D EQ++
Sbjct: 73 SRQLKSNDSEQEL 85
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 14/72 (19%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D+D + I E LA++ + +N SE++L LEA D+NGD +IS E
Sbjct: 56 DVDGNHQIEFSEFLALMSRQLKSNDSEQEL--------LEAFKVFDKNGDGLISAAELKH 107
Query: 59 ALERTDVEQKMS 70
L T + +K++
Sbjct: 108 VL--TSIGEKLT 117
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 1 MYDLDNDDAISRDELLAV---LHMMVGA--NISEEQLTS--IAERTILEADQNGDQMISF 53
MYDLD + IS+ E+L + ++ MV + + E++ T E+ + D N D +S
Sbjct: 107 MYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSL 166
Query: 54 DEFCKA 59
+EF +
Sbjct: 167 EEFIRG 172
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
+D + D IS EL L + +++ +++ R + E D +GD ISFDEF
Sbjct: 20 FDTNGDGKISSSELGDALKTL--GSVTPDEV----RRMMAEIDTDGDGFISFDEFT 69
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D DN IS EL + + +++ E S+ + E D+N D + FDEF + L
Sbjct: 450 MFDSDNSGKISSTELATIFGV---SDVDSETWKSV----LSEVDKNNDGEVDFDEFQQML 502
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D DN IS EL + + +++ E S+ + E D+N D + FDEF + L
Sbjct: 449 MFDSDNSGKISSTELATIFGV---SDVDSETWKSV----LSEVDKNNDGEVDFDEFQQML 501
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D DN IS EL + + +++ E S+ + E D+N D + FDEF + L
Sbjct: 426 MFDSDNSGKISSTELATIFGV---SDVDSETWKSV----LSEVDKNNDGEVDFDEFQQML 478
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
D IS EL V+ M+ G N + E+L + I E D++G + FDEF
Sbjct: 33 DGCISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEF 77
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
D IS EL V+ M+ G N + E+L + I E D++G + FDEF
Sbjct: 33 DGCISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEF 77
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D DN+ +IS EL V+ + G + SE ++ + + E D +G+ I F EF +
Sbjct: 18 LFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDL----MNEIDVDGNHQIEFSEFLALM 72
Query: 61 ER 62
R
Sbjct: 73 SR 74
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
D IS EL V+ M+ G N + E+L + I E D++G + FDEF
Sbjct: 33 DGCISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEF 77
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
D IS EL V+ M+ G N + E+L + I E D++G + FDEF
Sbjct: 33 DGCISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEF 77
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA-DQNGDQMISFDEFCKAL 60
+D D + IS DEL +V + + L S + ++ D N D + F+EFCK +
Sbjct: 435 FDQDGNGKISVDELASVFGL--------DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 486
Query: 61 ER 62
++
Sbjct: 487 QK 488
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA-DQNGDQMISFDEFCKAL 60
+D D + IS DEL +V + + L S + ++ D N D + F+EFCK +
Sbjct: 152 FDQDGNGKISVDELASVFGL--------DHLESKTWKEMISGIDSNNDGDVDFEEFCKMI 203
Query: 61 ER 62
++
Sbjct: 204 QK 205
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin
C In The Troponin C-Troponin I Complex
Length = 161
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
D IS EL V+ M+ G N + E+L + I E D++G + FDEF
Sbjct: 33 DGCISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEF 77
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD I+++EF K +
Sbjct: 12 VFDKDQNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADVDGDGQINYEEFVKVM 66
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D D IS EL L ++I E+L SI E + D N D + F+EF + L
Sbjct: 425 MFDKDGSGKISTKELFK-LFSQADSSIQMEELESIIE----QVDNNKDGEVDFNEFVEML 479
Query: 61 E 61
+
Sbjct: 480 Q 480
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD I+++EF K +
Sbjct: 92 VFDKDQNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADVDGDGQINYEEFVKVM 146
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D DN +IS EL V+ + G + SE ++ + + E D +G+ I F EF +
Sbjct: 19 LFDKDNSGSISASELATVMRSL-GLSPSEAEVADL----MNEIDVDGNHAIEFSEFLALM 73
Query: 61 ER----TDVEQKM 69
R D EQ++
Sbjct: 74 SRQLKCNDSEQEL 86
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 14/72 (19%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D+D + AI E LA++ + N SE++L LEA D+NGD +IS E
Sbjct: 57 DVDGNHAIEFSEFLALMSRQLKCNDSEQEL--------LEAFKVFDKNGDGLISAAELKH 108
Query: 59 ALERTDVEQKMS 70
L T + +K++
Sbjct: 109 VL--TSIGEKLT 118
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 62
D IS EL V+ M+ G N + E+L + I E D++G + FDE+ + R
Sbjct: 33 DGCISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEWLVMMAR 83
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + +S EL V+ + G +S+E++ + I AD +GD ++++EF + L
Sbjct: 91 VFDKDGNGFVSAAELRHVMTRL-GEKLSDEEVDEM----IRAADTDGDGQVNYEEFVRVL 145
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 1 MYDLDNDDAISRDELL----AVLHMMVGAN---ISEEQLTSIAERTILEADQNGDQMISF 53
+YD++ D I+++E+L A+ MM + E+ E + D+N D +++
Sbjct: 146 LYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTI 205
Query: 54 DEFCKALER 62
DEF ++ ++
Sbjct: 206 DEFIESCQK 214
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D D D I+ DEL + + G + +E+L ++ I EAD + D ++++EF + L
Sbjct: 15 FDQDGDGHITVDELRRAMAGL-GQPLPQEELDAM----IREADVDQDGRVNYEEFARML 68
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 27.7 bits (60), Expect = 2.0, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D DN IS EL + + +++ E S+ + E D+N D + FDEF + L
Sbjct: 427 FDSDNSGKISSTELATIFGV---SDVDSETWKSV----LSEVDKNNDGEVDFDEFQQXL 478
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D IS L V + G N+++E+L + I EAD++GD +S EF + +
Sbjct: 19 LFDDDETGKISFKNLKRVAKEL-GENLTDEELQEM----IDEADRDGDGEVSEQEFLRIM 73
Query: 61 ERT 63
++T
Sbjct: 74 KKT 76
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 27 ISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+SE++L +I + + + D+N D I + EF K+L+
Sbjct: 59 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 93
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 358 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 9/54 (16%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
D+D D ++++E+ + + + +AE+ +++AD NGD I+ +EF
Sbjct: 15 DVDGDGKLTKEEVTSFF--------KKHGIEKVAEQ-VMKADANGDGYITLEEF 59
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 392 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 392 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 392 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 392 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D IS L V + G N+++E+L + I EAD++GD +S EF + +
Sbjct: 29 LFDDDETGKISFKNLKRVAKEL-GENLTDEELQEM----IDEADRDGDGEVSEQEFLRIM 83
Query: 61 ERT 63
++T
Sbjct: 84 KKT 86
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDE---FCK 58
+D + D IS EL L + + E Q R + E D +GD I F+E FC
Sbjct: 12 FDTNGDGKISLSELTDALRTLGSTSADEVQ------RMMAEIDTDGDGFIDFNEFISFCN 65
Query: 59 A 59
A
Sbjct: 66 A 66
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDE---FCK 58
+D + D IS EL L + + E Q R + E D +GD I F+E FC
Sbjct: 11 FDTNGDGKISLSELTDALRTLGSTSADEVQ------RMMAEIDTDGDGFIDFNEFISFCN 64
Query: 59 A 59
A
Sbjct: 65 A 65
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 393 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD I+++EF + +
Sbjct: 16 VFDRDGNGLISAAELRHVM-----TNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 70
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 355 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 27 ISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+SE++L +I + + + D+N D I + EF K+L+
Sbjct: 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 143
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 27 ISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+SE++L +I + + + D+N D I + EF K+L+
Sbjct: 90 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 124
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 26.9 bits (58), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 358 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSI 35
++D DND+ ++ +EL V+ + GAN ++++++ I
Sbjct: 22 LFDKDNDNKLTAEELGTVMRAL-GANPTKQKISEI 55
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
D+D D ++++E+ + + + +AE+ +++AD NGD I+ +EF
Sbjct: 85 DVDGDGKLTKEEVTSFF--------KKHGIEKVAEQ-VMKADANGDGYITLEEFL 130
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 6 NDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 62
+ + IS++EL V+ + G ++ + S + I E D+NGD +SF+EF +++
Sbjct: 20 DPNQISKEELKLVMQTL-GPSLL--KGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 88 VFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADVDGDGQVNYEEFVQVM 142
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 1 MYDLDNDDAISRDELLAV---LHMMVGAN----ISEEQLTSIAERTILEADQNGDQMISF 53
+YD++ D I+++E++ + ++ M+GA ++E+ + + D+N D +++
Sbjct: 97 LYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTL 156
Query: 54 DEFCKALERTD 64
DEF ++ + D
Sbjct: 157 DEFLESCQEDD 167
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 91 VFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADVDGDGQVNYEEFVQVM 145
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
+ D+D D ++++E+ + + + +AE+ +++AD NGD I+ +EF
Sbjct: 83 LMDVDGDGKLTKEEVTSFF--------KKHGIEKVAEQ-VMKADANGDGYITLEEFL 130
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ ++ I EAD +GD ++++EF + +
Sbjct: 92 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D + D I DEL +L G I+E+ + E + + D+N D I +DEF + +
Sbjct: 14 MFDKNADGYIDLDELKIMLQA-TGETITEDDI----EELMKDGDKNNDGRIDYDEFLEFM 68
Query: 61 E 61
+
Sbjct: 69 K 69
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 91 VFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADVDGDGQVNYEEFVQVM 145
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD I+++EF + +
Sbjct: 91 VFDRDGNGLISAAELRHVM-----TNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD I+++EF + +
Sbjct: 91 VFDRDGNGLISAAELRHVM-----TNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 92 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 146
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D I +EL +L G ++ EE + E + ++D+N D I FDEF K +
Sbjct: 18 IFDKNADGFIDIEELGEILRA-TGEHVIEEDI----EDLMKDSDKNNDGRIDFDEFLKMM 72
Query: 61 E 61
E
Sbjct: 73 E 73
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 10 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 64
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 17 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 71
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D IS L V + G N+++E+L + I EAD++GD +S EF +
Sbjct: 112 LFDDDETGKISFKNLKRVAKEL-GENLTDEEL----QEXIDEADRDGDGEVSEQEFLRIX 166
Query: 61 ERT 63
++T
Sbjct: 167 KKT 169
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 89 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 87 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 141
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 89 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 143
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 13 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 14 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 68
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 89 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 143
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ N+ E+ + I EAD +GD ++++EF + +
Sbjct: 13 VFDKDGNGYISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 67
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 16 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 70
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 92 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 146
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 88 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 142
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 97 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 91 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 91 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 145
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 90 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 144
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 92 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 146
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D IS L V + G N+++E+L + I EAD++GD ++ +EF + +
Sbjct: 89 LFDDDETGKISFKNLKRVAKEL-GENMTDEELQEM----IDEADRDGDGEVNEEEFFRIM 143
Query: 61 ERT 63
++T
Sbjct: 144 KKT 146
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 93 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 147
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 7 DDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
D IS EL V + G N + E+L + I E D++G + FDEF
Sbjct: 33 DGCISTKELGKVXRXL-GQNPTPEEL----QEXIDEVDEDGSGTVDFDEF 77
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 95 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 92 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 146
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D + IS EL V + G +++E++ ++ I EAD +GD ++++EF +
Sbjct: 92 VFDKDGNGYISAAELRHVXTNL-GEKLTDEEV----DQXIREADIDGDGQVNYEEFVQ 144
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 92 VFDKDGNGYISAAELRHVMTNL-GEXLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF + +
Sbjct: 91 VFDKDGNGYISAAELRHVMTNL-GEXLTDEEVDEM----IREADIDGDGQVNYEEFVQMM 145
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 25.8 bits (55), Expect = 6.8, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 7 DDAISRDELLAV----LHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 62
D+ I+++ L + L++ +GA ++ ++ + T+ D NG+Q +FD+ A+ R
Sbjct: 220 DEQIAKEALKVLTKQGLNIRLGARVTASEVKK-KQVTVTFTDANGEQKETFDKLIVAVGR 278
Query: 63 TDV 65
V
Sbjct: 279 RPV 281
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D IS L V + G N+++E+L + I EAD++GD +S EF + +
Sbjct: 87 LFDDDETGKISFKNLKRVAKEL-GENLTDEELQEM----IDEADRDGDGEVSEQEFLRIM 141
Query: 61 ER 62
++
Sbjct: 142 KK 143
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 1 MYDLDNDDAISRDEL----LAVLHM--MVGANISEEQLTSIAERTILEADQNGDQMISFD 54
+YDL I R+EL +A+LH +V +SE+ + + ++ ++AD+ D I D
Sbjct: 119 LYDLRQTGFIEREELKEMVVALLHESELV---LSEDMIEVMVDKAFVQADRKNDGKIDID 175
Query: 55 EF 56
E+
Sbjct: 176 EW 177
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 1 MYDLDNDDAISRDEL----LAVLHM--MVGANISEEQLTSIAERTILEADQNGDQMISFD 54
+YDL I R+EL +A+LH +V +SE+ + + ++ ++AD+ D I D
Sbjct: 119 LYDLRQTGFIEREELKEMVVALLHESELV---LSEDMIEVMVDKAFVQADRKNDGKIDID 175
Query: 55 EF 56
E+
Sbjct: 176 EW 177
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF
Sbjct: 89 VFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFV 140
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF
Sbjct: 91 VFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFV 142
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D + IS+ EL + + G +E +L I +R D +GD + F+EF L
Sbjct: 44 VFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRL----DMDGDGQVDFEEFVTLL 98
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D + IS EL V + G +++E++ + I EAD +GD ++++EF +
Sbjct: 91 VFDKDGNGYISAAELRHVXTNL-GEKLTDEEV----DEXIREADIDGDGQVNYEEFVQ 143
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF
Sbjct: 92 VFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFV 143
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF
Sbjct: 91 VFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFV 142
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF
Sbjct: 92 VFDKDGNGFISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFV 143
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D + IS EL V + G +++E++ + I EAD +GD ++++EF +
Sbjct: 91 VFDKDGNGYISAAELRHVXTNL-GEKLTDEEV----DEXIREADIDGDGQVNYEEFVQ 143
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,823,908
Number of Sequences: 62578
Number of extensions: 51410
Number of successful extensions: 438
Number of sequences better than 100.0: 183
Number of HSP's better than 100.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 292
Number of HSP's gapped (non-prelim): 211
length of query: 75
length of database: 14,973,337
effective HSP length: 44
effective length of query: 31
effective length of database: 12,219,905
effective search space: 378817055
effective search space used: 378817055
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)