RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy17264
(75 letters)
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 97.5 bits (243), Expect = 1e-27
Identities = 45/74 (60%), Positives = 58/74 (78%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YDLD D ISR E+L VL +MVG ++EEQL +IA+RT+ EAD++GD +SF EF K+L
Sbjct: 122 LYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
Query: 61 ERTDVEQKMSIRFL 74
E+ DVEQKMSIR L
Sbjct: 182 EKMDVEQKMSIRIL 195
Score = 34.3 bits (79), Expect = 0.001
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 9/60 (15%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 62
D + +SR +L + + V + +R I +G Q + F F + L
Sbjct: 39 DRNKKGYLSRMDLQQIGALAV---------NPLGDRIIESFFPDGSQRVDFPGFVRVLAH 89
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 94.5 bits (235), Expect = 2e-26
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YDLD DD ISRDELL VL MMVG NIS+EQL SIA+RTI EADQ+GD ISF EF K L
Sbjct: 121 LYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
Query: 61 ERTDVEQKMSIRFL 74
E+ DVEQKMSIRFL
Sbjct: 181 EKVDVEQKMSIRFL 194
Score = 32.4 bits (74), Expect = 0.005
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 9/60 (15%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 62
D + +SR++ + E + + +R I G+ ++F F + L
Sbjct: 39 DKGENGTLSREDFQRIP---------ELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAH 89
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 87.3 bits (217), Expect = 4e-24
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YD+D D IS EL VL MMVG N+ + QL I ++TI+ AD++GD ISF+EFC +
Sbjct: 83 IYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 142
Query: 61 ERTDVEQKMSIR 72
D+ +KM +
Sbjct: 143 GGLDIHKKMVVD 154
Score = 34.9 bits (81), Expect = 6e-04
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 13/73 (17%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
DLDN ++S +E +++ + + +R I D +G+ + F EF + +
Sbjct: 14 KLDLDNSGSLSVEEFMSLPELQQ---------NPLVQRVIDIFDTDGNGEVDFKEFIEGV 64
Query: 61 ----ERTDVEQKM 69
+ D EQK+
Sbjct: 65 SQFSVKGDKEQKL 77
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 76.7 bits (189), Expect = 1e-19
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVG----ANISEEQLTSIAERTILEADQNGDQMISFDEF 56
++D D+D ++R++L +++ + G +S ++ + + + E+D + D I+ EF
Sbjct: 106 IFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 165
Query: 57 CKALERT-DVEQKMSIRF 73
+ R+ D I
Sbjct: 166 QHVISRSPDFASSFKIVL 183
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 76.4 bits (188), Expect = 2e-19
Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGAN---ISEEQLTSIAERTILEADQNGDQMISFDEFC 57
+YDL I R+EL ++ ++ + +SE+ + + ++ ++AD+ D I DE+
Sbjct: 119 LYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK 178
Query: 58 KALER-TDVEQKMSIRFL 74
+ + + M++ +L
Sbjct: 179 DFVSLNPSLIKNMTLPYL 196
Score = 34.0 bits (78), Expect = 0.001
Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 10/75 (13%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL-- 60
+ +D I ++E L + A+R D + +I F EF ++L
Sbjct: 49 SIIDDGLIHKEEFQLALFRN------RNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGV 102
Query: 61 --ERTDVEQKMSIRF 73
V +K+ F
Sbjct: 103 FHPSAPVHEKVKFAF 117
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 76.1 bits (187), Expect = 4e-19
Identities = 16/78 (20%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGA----NISEEQLTSIAERTILEADQNGDQMISFDEF 56
++D D+D ++R++L +++ + G +S ++ + + + E+D + D I+ EF
Sbjct: 137 IFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEF 196
Query: 57 CKALERT-DVEQKMSIRF 73
+ R+ D I
Sbjct: 197 QHVISRSPDFASSFKIVL 214
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 74.1 bits (182), Expect = 2e-18
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 1 MYDLDNDDAISRDELLAVLHM---MVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
+YDL I R E+ ++ G N+ + + I ++T EAD D I +E+
Sbjct: 130 LYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWR 189
Query: 58 KALER-TDVEQKMSIRFL 74
+ R + + M++++L
Sbjct: 190 SLVLRHPSLLKNMTLQYL 207
Score = 34.8 bits (80), Expect = 9e-04
Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL-- 60
+ +D I+++E L ++ + A+R D + ++ F+EF +AL
Sbjct: 60 AVIDDGLINKEEFQLALFKT------NKKESLFADRVFDLFDTKHNGILGFEEFARALSV 113
Query: 61 --ERTDVEQKMSIRF 73
++ K+ F
Sbjct: 114 FHPNAPIDDKIHFSF 128
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic,
ER, golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 61.5 bits (149), Expect = 4e-14
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMM-------VGANISEEQLTSIAERTILEADQNGDQMISF 53
M+D D ++ + EL + + +SE++L +I + + + D+N D I +
Sbjct: 76 MHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDY 135
Query: 54 DEFCKALE 61
EF K+L+
Sbjct: 136 AEFAKSLQ 143
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 60.2 bits (146), Expect = 3e-13
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTS--IAERTILEADQNGDQMISFDEFCK 58
+YD+D + I R ELL ++ + N E +T+ + D NGD +S +EF +
Sbjct: 96 LYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFME 155
Query: 59 ALERTDVEQKMSIRFL 74
+++ +V + R L
Sbjct: 156 GVQKDEVLLDILTRSL 171
Score = 37.4 bits (87), Expect = 1e-04
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL-- 60
++ E + + S + E+ D N D I F E+ AL
Sbjct: 25 TECPSGQLTLYEFKQFFGLK-NLSPSANKY---VEQMFETFDFNKDGYIDFMEYVAALSL 80
Query: 61 -ERTDVEQKMSIRF 73
+ V+QK+ F
Sbjct: 81 VLKGKVDQKLRWYF 94
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal
specific guanylate cyclase activator; 2.40A {Bos taurus}
SCOP: a.39.1.5
Length = 193
Score = 58.3 bits (141), Expect = 1e-12
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANIS-------EEQLTSIAERTILEADQNGDQMISF 53
MYDLD + IS+ E+L ++ + S E E+ + D N D +S
Sbjct: 107 MYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSL 166
Query: 54 DEFCKALERTDVEQKM 69
+EF + + ++
Sbjct: 167 EEFIRGAKSDPSIVRL 182
Score = 34.8 bits (80), Expect = 7e-04
Identities = 19/75 (25%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL- 60
+S +E + + AE D NGD I F EF AL
Sbjct: 35 LRDCPSGHLSMEEFKKIYGNF----FPYGDASKFAEHVFRTFDANGDGTIDFREFIIALS 90
Query: 61 --ERTDVEQKMSIRF 73
R +EQK+ F
Sbjct: 91 VTSRGKLEQKLKWAF 105
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 57.2 bits (138), Expect = 3e-12
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMM-------VGANISEEQLTSIAERTILEADQNGDQMISF 53
+YDL++D I+ DE+L ++ + V N E ++ D+N D I+
Sbjct: 107 LYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITL 166
Query: 54 DEFCKALER 62
DEF + +
Sbjct: 167 DEFREGSKV 175
Score = 27.1 bits (60), Expect = 0.47
Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL- 60
++R++ + + A D++ + I F+EF L
Sbjct: 35 LRDCPSGQLAREDFVKIYKQFFP----FGSPEDFANHLFTVFDKDNNGFIHFEEFITVLS 90
Query: 61 --ERTDVEQKMSIRF 73
R +E+K+S F
Sbjct: 91 TTSRGTLEEKLSWAF 105
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 57.1 bits (138), Expect = 4e-12
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMM-------VGANISEEQLTSIAERTILEADQNGDQMISF 53
+YDLDN+ IS DE+L ++ + V E+ + D+N D ++
Sbjct: 107 LYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTL 166
Query: 54 DEFCKALER 62
+EFC+ +R
Sbjct: 167 EEFCEGSKR 175
Score = 32.1 bits (73), Expect = 0.007
Identities = 13/75 (17%), Positives = 23/75 (30%), Gaps = 7/75 (9%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL- 60
+ +++ E + AE D + + I F EF AL
Sbjct: 35 FKDCPSGHLNKSEFQKIYKQFFPFGDPSA----FAEYVFNVFDADKNGYIDFKEFICALS 90
Query: 61 --ERTDVEQKMSIRF 73
R ++ K+ F
Sbjct: 91 VTSRGELNDKLIWAF 105
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 57.7 bits (139), Expect = 4e-12
Identities = 13/71 (18%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHM-------MVGANISEEQLTSIAERTILEADQNGDQMISF 53
+YD++ D I+++E++ ++ + E+ + + D+N D +++
Sbjct: 133 LYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTL 192
Query: 54 DEFCKALERTD 64
DEF ++ + D
Sbjct: 193 DEFLESCQEDD 203
Score = 28.8 bits (64), Expect = 0.12
Identities = 10/75 (13%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL- 60
+ ++ + + ++ A D + F++F AL
Sbjct: 61 KNECPSGVVNEETFKQIYAQFFP----HGDASTYAHYLFNAFDTTQTGSVKFEDFVTALS 116
Query: 61 --ERTDVEQKMSIRF 73
R V +K+ F
Sbjct: 117 ILLRGTVHEKLRWTF 131
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand,
transport protein; 2.00A {Rattus norvegicus} SCOP:
a.39.1.5 PDB: 2nz0_A 2i2r_E
Length = 183
Score = 56.7 bits (137), Expect = 6e-12
Identities = 13/71 (18%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHM-------MVGANISEEQLTSIAERTILEADQNGDQMISF 53
+YD++ D I+++E++ ++ + E+ + + D+N D +++
Sbjct: 100 LYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTL 159
Query: 54 DEFCKALERTD 64
DEF ++ + D
Sbjct: 160 DEFLESXQEDD 170
Score = 27.9 bits (62), Expect = 0.25
Identities = 10/75 (13%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL- 60
+ ++ + + ++ A D + F++F AL
Sbjct: 28 KNEXPSGVVNEETFKQIYAQF----FPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALS 83
Query: 61 --ERTDVEQKMSIRF 73
R V +K+ F
Sbjct: 84 ILLRGTVHEKLRWTF 98
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 56.4 bits (136), Expect = 7e-12
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGA-------NISEEQLTSIAERTILEADQNGDQMISF 53
+YDLDND I+R+E+L ++ + E +R D+N D ++
Sbjct: 107 LYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTL 166
Query: 54 DEFCKALER-TDVEQKMSI 71
EF + + + Q +S+
Sbjct: 167 QEFQEGSKADPSIVQALSL 185
Score = 28.7 bits (64), Expect = 0.13
Identities = 14/75 (18%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL- 60
+ + T A D+N D I F EF +AL
Sbjct: 35 IKDCPSGQLDAAGFQKIYKQFFP----FGDPTKFATFVFNVFDENKDGRIEFSEFIQALS 90
Query: 61 --ERTDVEQKMSIRF 73
R +++K+ F
Sbjct: 91 VTSRGTLDEKLRWAF 105
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 56.4 bits (136), Expect = 1e-11
Identities = 15/79 (18%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHM-------MVGANISEEQLTSIAERTILEADQNGDQMISF 53
+YD++ D I+++E+L ++ + E+ E + D+N D +++
Sbjct: 146 LYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTI 205
Query: 54 DEFCKALER-TDVEQKMSI 71
DEF ++ ++ ++ + M +
Sbjct: 206 DEFIESCQKDENIMRSMQL 224
Score = 30.6 bits (69), Expect = 0.025
Identities = 12/74 (16%), Positives = 28/74 (37%), Gaps = 7/74 (9%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL-- 60
+ ++ + + + T+ A D + + +SF++F K L
Sbjct: 75 NECPSGVVNEETFKEIYSQF----FPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSI 130
Query: 61 -ERTDVEQKMSIRF 73
R V++K++ F
Sbjct: 131 LLRGTVQEKLNWAF 144
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 55.4 bits (133), Expect = 3e-11
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHM-------MVGANISEEQLTSIAERTILEADQNGDQMISF 53
+YD++ D I+++E+LA++ + E+ ER + D+N D +++
Sbjct: 173 LYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTI 232
Query: 54 DEFCKALERTD 64
DEF + ++ +
Sbjct: 233 DEFLETCQKDE 243
Score = 26.9 bits (59), Expect = 0.60
Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 7/75 (9%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+ + D + + T+ A D +G+ I F++F L
Sbjct: 101 KNECPTGLVDEDTFKLIYSQFFP----QGDATTYAHFLFNAFDADGNGAIHFEDFVVGLS 156
Query: 62 ---RTDVEQKMSIRF 73
R V +K+ F
Sbjct: 157 ILLRGTVHEKLKWAF 171
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase
activator; 3.00A {Homo sapiens}
Length = 211
Score = 54.8 bits (132), Expect = 4e-11
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 1 MYDLDNDDAISRDELLAVLH-MMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
+YD D + +I ++ELL + + + D N D ++ +EF
Sbjct: 101 LYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFING 160
Query: 60 LER-TDVEQKMSIRF 73
+ + D+ + + F
Sbjct: 161 MAKDQDLLEIVYKSF 175
Score = 35.9 bits (83), Expect = 3e-04
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL-- 60
+ E +L + G N + ++ D N D + F EF A+
Sbjct: 30 MEYPSGLQTLHEFKTLLGLQ-GLNQKANKH---IDQVYNTFDTNKDGFVDFLEFIAAVNL 85
Query: 61 -ERTDVEQKMSIRF 73
+ +EQK+ F
Sbjct: 86 IMQEKMEQKLKWYF 99
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 52.7 bits (126), Expect = 2e-10
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 9/71 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGAN---------ISEEQLTSIAERTILEADQNGDQMI 51
+YD+D + IS++E+L ++ + E AE+ +N D +
Sbjct: 115 LYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKL 174
Query: 52 SFDEFCKALER 62
+ EF +
Sbjct: 175 TEKEFIEGTLA 185
Score = 29.6 bits (66), Expect = 0.054
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 7/74 (9%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL-- 60
I++ + ++ + + A+ D N D + F E+ AL
Sbjct: 44 KDCPTGRITQQQFQSIYAKF----FPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHM 99
Query: 61 -ERTDVEQKMSIRF 73
QK+ F
Sbjct: 100 TTAGKTNQKLEWAF 113
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 51.0 bits (122), Expect = 1e-09
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 12/81 (14%)
Query: 1 MYDLDNDDAISRDELLAVLHMM------------VGANISEEQLTSIAERTILEADQNGD 48
+YD D + I R ELL ++ + + +R L D+NGD
Sbjct: 103 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGD 162
Query: 49 QMISFDEFCKALERTDVEQKM 69
+S +EF + R KM
Sbjct: 163 GQLSLNEFVEGARRDKWVMKM 183
Score = 36.7 bits (85), Expect = 2e-04
Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 8/74 (10%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE- 61
+ + E + ++ E D NGD I F E+ AL
Sbjct: 33 EECPSGTLFMHEFKRFFKVPDNEEATQY-----VEAMFRAFDTNGDNTIDFLEYVAALNL 87
Query: 62 --RTDVEQKMSIRF 73
R +E K+ F
Sbjct: 88 VLRGTLEHKLKWTF 101
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding
protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 48.4 bits (116), Expect = 1e-09
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGA-NISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
D + D ++ EL + + +S++++ + + I AD+N D IS +EF A
Sbjct: 15 KLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNA 74
Query: 60 LERTDVEQK 68
+ K
Sbjct: 75 NAELLCQLK 83
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 49.7 bits (119), Expect = 5e-09
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D D IS EL + ++I E+L SI I + D N D + F+EF + L
Sbjct: 425 MFDKDGSGKISTKELFKLFSQA-DSSIQMEELESI----IEQVDNNKDGEVDFNEFVEML 479
Score = 37.0 bits (86), Expect = 1e-04
Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILE---------ADQNGDQMI 51
D +ND + RDEL+ H + + E + +E D +G I
Sbjct: 339 KLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSI 398
Query: 52 SFDEFCKA-LERTDVEQKMSIR 72
+ EF + ++RT + + +
Sbjct: 399 EYSEFIASAIDRTILLSRERME 420
Score = 24.3 bits (53), Expect = 5.3
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 13/66 (19%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D+D +I E +A + I L ++ + A D++G IS E K
Sbjct: 391 DMDGSGSIEYSEFIA-------SAIDRTIL--LSRERMERAFKMFDKDGSGKISTKELFK 441
Query: 59 ALERTD 64
+ D
Sbjct: 442 LFSQAD 447
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 49.7 bits (119), Expect = 5e-09
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D I+++EL ++ +ISE+ + + EADQN D MI FDEF +
Sbjct: 443 LFDTDKSGKITKEELA---NLFGLTSISEKTWNDV----LGEADQNKDNMIDFDEFVSMM 495
Query: 61 ER 62
+
Sbjct: 496 HK 497
Score = 39.3 bits (92), Expect = 2e-05
Identities = 13/76 (17%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAER--TILEA-DQNGDQMISFDEFC 57
D + D + + EL+ +++ +L ++ E IL+ D + + I + EF
Sbjct: 363 KLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFI 422
Query: 58 KA-LERTDVEQKMSIR 72
+++ + + +R
Sbjct: 423 SVCMDKQILFSEERLR 438
Score = 24.3 bits (53), Expect = 5.1
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 13/70 (18%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D D + I E ++ + ++ L S E + A D + I+ +E
Sbjct: 409 DFDKNGYIEYSEFIS-------VCMDKQILFS--EERLRRAFNLFDTDKSGKITKEELAN 459
Query: 59 ALERTDVEQK 68
T + +K
Sbjct: 460 LFGLTSISEK 469
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated,
SEN membrane targeting, EF-hand, cell projection,
cilium; 2.00A {Trypanosoma cruzi}
Length = 219
Score = 48.7 bits (116), Expect = 7e-09
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D + + +E + + E ++ E D+NG ++FDEF
Sbjct: 138 EIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAAL----FKELDKNGTGSVTFDEFAAWA 193
Query: 61 ERTDVE 66
++
Sbjct: 194 SAVKLD 199
Score = 36.4 bits (84), Expect = 2e-04
Identities = 9/64 (14%), Positives = 22/64 (34%), Gaps = 5/64 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAER-----TILEADQNGDQMISFDE 55
+D + + DE+ + ++ + ++ I +R L + F E
Sbjct: 56 KFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVE 115
Query: 56 FCKA 59
F +
Sbjct: 116 FLEF 119
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 48.9 bits (117), Expect = 8e-09
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D DN IS EL + +++ E S+ + E D+N D + FDEF + L
Sbjct: 426 MFDSDNSGKISSTELA---TIFGVSDVDSETWKSV----LSEVDKNNDGEVDFDEFQQML 478
Query: 61 ER 62
+
Sbjct: 479 LK 480
Score = 37.4 bits (87), Expect = 1e-04
Identities = 10/79 (12%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 1 MYDLDNDDAISRDELLAVLH------MMVGANISEEQLTSIAERTILEADQNGDQMISFD 54
D + D + R EL+ + + + ++ + D + + I +
Sbjct: 343 KMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYS 402
Query: 55 EFCKA-LERTDVEQKMSIR 72
EF ++R + + +
Sbjct: 403 EFVTVAMDRKTLLSRERLE 421
Score = 30.4 bits (69), Expect = 0.031
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Query: 17 AVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERTDVEQKMSIRFL 74
A L M S+++ + + D+NGD + E + + + L
Sbjct: 319 AALLYMGSKLTSQDETKELTA-IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASML 375
Score = 24.3 bits (53), Expect = 5.3
Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 13/70 (18%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D D + I E + + + L ++ + A D + IS E
Sbjct: 392 DFDKNGYIEYSEFVT-------VAMDRKTL--LSRERLERAFRMFDSDNSGKISSTELAT 442
Query: 59 ALERTDVEQK 68
+DV+ +
Sbjct: 443 IFGVSDVDSE 452
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 48.2 bits (115), Expect = 1e-08
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D D + IS DEL + ++ + + I D N D + F+EFCK +
Sbjct: 434 KFDQDGNGKISVDELA---SVFGLDHLESKTWKEM----ISGIDSNNDGDVDFEEFCKMI 486
Query: 61 ER 62
++
Sbjct: 487 QK 488
Score = 38.1 bits (89), Expect = 6e-05
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLT---SIAERTILEADQNGDQMISFDEFC 57
D + D + R EL+ + G ++ L S + + AD + + I + EF
Sbjct: 354 HIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFV 413
Query: 58 KA-LERTDVEQKMSIR 72
++R + K +
Sbjct: 414 TVAMDRKSLLSKDKLE 429
Score = 30.8 bits (70), Expect = 0.021
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 17 AVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 62
A L M S+E+ + + D+NGD + E +
Sbjct: 330 AALLYMASKLTSQEETKELTD-IFRHIDKNGDGQLDRQELIDGYSK 374
Score = 24.3 bits (53), Expect = 4.2
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 13/70 (18%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D D + I E + + + L +++ + A DQ+G+ IS DE
Sbjct: 400 DFDRNGYIDYSEFVT-------VAMDRKSL--LSKDKLESAFQKFDQDGNGKISVDELAS 450
Query: 59 ALERTDVEQK 68
+E K
Sbjct: 451 VFGLDHLESK 460
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 47.9 bits (114), Expect = 2e-08
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 7/61 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ D D D + DEL ++ ++ +E A +AD + + E
Sbjct: 136 VLDDDGDGTVDVDELKTMMKAF---DVPQEA----AYTFFEKADTDKSGKLERTELVHLF 188
Query: 61 E 61
Sbjct: 189 R 189
Score = 41.3 bits (97), Expect = 4e-06
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMM---VGANISE-EQLTSIAERTILEADQNGDQMISFDEF 56
+DLD+D + DE+L M V A + E++ L + +++
Sbjct: 44 TFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDW 103
Query: 57 CKALER 62
+A
Sbjct: 104 VEANRV 109
Score = 30.6 bits (69), Expect = 0.027
Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA------DQNGDQMISFDEF 56
++ + + R++ + + A E+ + +L D +GD + DE
Sbjct: 91 GVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDEL 150
Query: 57 CKALERTDVEQ 67
++ DV Q
Sbjct: 151 KTMMKAFDVPQ 161
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A
{Plasmodium falciparum K1}
Length = 197
Score = 47.6 bits (114), Expect = 2e-08
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMM-VGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+D+D + IS +EL + + + ++ + S+ + E D NGD I F EF
Sbjct: 137 FFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSL----LQEVDLNGDGEIDFHEFML 191
Score = 41.0 bits (97), Expect = 4e-06
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
D+DN +S E+L L + G + + + + D N I + +F A
Sbjct: 65 ALDVDNSGTLSSQEILDGLKKI-GYQKIPPDIHQV----LRDIDSNASGQIHYTDFLAA 118
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom
consortium, SGC, ATP-binding; 1.15A {Plasmodium
falciparum} PDB: 3o4y_A
Length = 191
Score = 47.2 bits (113), Expect = 2e-08
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D+DND I+ EL +L+ ++ + +R I + D+N D I F EF +
Sbjct: 130 VFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSE 187
Score = 40.3 bits (95), Expect = 7e-06
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
+ D D I++++L L G + + + + D +G I + EF A
Sbjct: 60 VLDEDGKGYITKEQLKKGLEKD-GLKLPYN-----FDLLLDQIDSDGSGKIDYTEFIAA 112
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 44.8 bits (107), Expect = 3e-08
Identities = 13/68 (19%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D I DE ++ + +++ ++ + EAD++G+ +I EF +
Sbjct: 16 VFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEA----MKEADEDGNGVIDIPEFMDLI 71
Query: 61 ERTDVEQK 68
+++ K
Sbjct: 72 KKSKNALK 79
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 47.0 bits (112), Expect = 3e-08
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D D D +S E A L + G ++++++ + D N + IS DEF +
Sbjct: 110 CIDTDKDGYVSLPEFKAFLQAV-GPDLTDDKAITC----FNTLDFNKNGQISRDEFLVTV 164
Query: 61 ER 62
Sbjct: 165 ND 166
Score = 35.1 bits (81), Expect = 6e-04
Identities = 10/66 (15%), Positives = 18/66 (27%), Gaps = 4/66 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANI----SEEQLTSIAERTILEADQNGDQMISFDEF 56
D+ D ISR++ + + E+ R + IS +E
Sbjct: 22 RVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEA 81
Query: 57 CKALER 62
Sbjct: 82 AVNATD 87
Score = 30.5 bits (69), Expect = 0.024
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTIL--EADQNGDQMISFDEFCKA 59
L IS +E + EE+ ++ + I+ D + D +S EF
Sbjct: 68 LGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAF 127
Query: 60 L 60
L
Sbjct: 128 L 128
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix,
structural genomics, protein structure initiative; NMR
{Arabidopsis thaliana} SCOP: a.39.1.5
Length = 67
Score = 44.4 bits (106), Expect = 3e-08
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D + D +S DE V ++E + E D +G+ ++ DEF +
Sbjct: 9 KFDKNKDGKLSLDEFREVALAF-SPYFTQEDIVKF----FEEIDVDGNGELNADEFTSCI 63
Query: 61 ER 62
E+
Sbjct: 64 EK 65
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 44.0 bits (105), Expect = 5e-08
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+D D D I+ DEL + + G + +E+L ++ I EAD + D ++++EF +
Sbjct: 14 AFDQDGDGHITVDELRRAMAGL-GQPLPQEELDAM----IREADVDQDGRVNYEEFAR 66
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 46.3 bits (110), Expect = 5e-08
Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D I+ DE A + G + S+E E T D + + DE +
Sbjct: 121 IFDKDGSGTITLDEWKAYGKIS-GISPSQEDC----EATFRHCDLDNAGDLDVDEMTR 173
Score = 34.3 bits (79), Expect = 0.001
Identities = 9/67 (13%), Positives = 24/67 (35%), Gaps = 5/67 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMV----GANISEEQLTS-IAERTILEADQNGDQMISFDE 55
D++ + I+ DE+++ + A + + E + I+F +
Sbjct: 28 FLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQ 87
Query: 56 FCKALER 62
F ++
Sbjct: 88 FLDGWKQ 94
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform
A; EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 44.4 bits (105), Expect = 7e-08
Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 5/70 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D + ISR+E A+ + +++EQ +R E N + + +F
Sbjct: 32 NFDTMKTNTISREEFRAICNRR-VQILTDEQF----DRLWNEMPVNAKGRLKYPDFLSRF 86
Query: 61 ERTDVEQKMS 70
M+
Sbjct: 87 SSETAATPMA 96
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 45.2 bits (108), Expect = 9e-08
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D + D IS EL + ++G + + I I + D NGD + F+EF + +
Sbjct: 96 EFDTNGDGEISTSELREAMRALLGHQVGHRDIEEI----IRDVDLNGDGRVDFEEFVRMM 151
Query: 61 ER 62
R
Sbjct: 152 SR 153
Score = 41.4 bits (98), Expect = 2e-06
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D D D I+ +L + M G +E +L + + + N + FD+F + +
Sbjct: 19 EFDKDKDGYINCRDLGNCMRTM-GYMPTEMELIEL----SQQINMNLGGHVDFDDFVELM 73
Query: 61 ER 62
Sbjct: 74 GP 75
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 45.2 bits (107), Expect = 1e-07
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
+ D D + AI+ DE A G S E E T D + + DE +
Sbjct: 117 IVDKDQNGAITLDEWKAYTKAA-GIIQSSEDC----EETFRVCDIDESGQLDVDEMTRQ 170
Score = 33.2 bits (76), Expect = 0.003
Identities = 10/73 (13%), Positives = 26/73 (35%), Gaps = 5/73 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMV----GANISEEQL-TSIAERTILEADQNGDQMISFDE 55
D++++ IS DE++ +V GA + + E A +
Sbjct: 24 FLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPA 83
Query: 56 FCKALERTDVEQK 68
+ + ++ ++
Sbjct: 84 YIEGWKKLATDEL 96
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 45.0 bits (107), Expect = 2e-07
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D D I+ +EL + + +E + + E D+N D + F+EF + +
Sbjct: 131 QFDSDGSGKITNEELG---RLFGVTEVDDETWHQV----LQECDKNNDGEVDFEEFVEMM 183
Query: 61 ER-TDVE 66
++ DV+
Sbjct: 184 QKICDVK 190
Score = 35.0 bits (81), Expect = 7e-04
Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 14/69 (20%)
Query: 1 MYDLDNDDAISRDELLAVLH----------MMVGANISEEQLTSIAERTILEADQNGDQM 50
D + D + R EL+ + ++ E ++ I + D + +
Sbjct: 48 QLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHI----LQSVDFDRNGY 103
Query: 51 ISFDEFCKA 59
I + EF
Sbjct: 104 IEYSEFVTV 112
Score = 23.8 bits (52), Expect = 7.1
Identities = 10/62 (16%), Positives = 21/62 (33%), Gaps = 9/62 (14%)
Query: 17 AVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCKALERTDVEQKMSIR 72
A + M + E+ E + + D NGD + E + + + ++
Sbjct: 24 AAMLFMGSKLTTLEE---TKE--LTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVS 78
Query: 73 FL 74
L
Sbjct: 79 DL 80
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP:
a.39.1.4
Length = 109
Score = 43.0 bits (102), Expect = 2e-07
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMM--VGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ D D I DEL L + +++ + + + D +GD I DE+
Sbjct: 50 VIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAF----LKAGDSDGDGAIGVDEWAA 105
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 43.0 bits (102), Expect = 2e-07
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF +
Sbjct: 37 VEDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQ 89
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal
binding Pro; NMR {Glycine max}
Length = 92
Score = 42.6 bits (101), Expect = 3e-07
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF K
Sbjct: 17 VFDKDQNGYISASELRHVMINL-GEKLTDEEVEQM----IKEADLDGDGQVNYEEFVK 69
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 43.3 bits (103), Expect = 3e-07
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D++ D A+S +E+ A + A +E+ L I D +G+ I +EF K
Sbjct: 8 EIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLLQLI----FKSIDADGNGEIDQNEFAKFY 62
Query: 61 ERTDVEQK 68
+
Sbjct: 63 GSIQGQDL 70
Score = 41.4 bits (98), Expect = 1e-06
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ D+D D ++++E+ + E++ +++AD NGD I+ +EF +
Sbjct: 83 LMDVDGDGKLTKEEVTSFF-----KKHGIEKVAEQ----VMKADANGDGYITLEEFLE 131
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 42.9 bits (102), Expect = 3e-07
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 1 MYDLDNDDAISRDELLAVL--HMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ D D I +EL VL G ++++ + ++ + D + D I DEF K
Sbjct: 49 ILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKAL----LAAGDSDHDGKIGADEFAK 104
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 44.4 bits (105), Expect = 4e-07
Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
D D +S++E+ VL + ++ D + + +S+ EF
Sbjct: 261 FADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQ----FSVVDVDDSKSLSYQEFVM 314
Score = 40.6 bits (95), Expect = 8e-06
Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 6/59 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
D +++ +SR E + S+ + AD++ + F E+
Sbjct: 196 KIDTNSNGTLSRKEFREHFVRL------GFDKKSVQDALFRYADEDESDDVGFSEYVHL 248
Score = 37.5 bits (87), Expect = 9e-05
Identities = 8/59 (13%), Positives = 16/59 (27%), Gaps = 5/59 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
+ S +L VL I E L + + + + +S+
Sbjct: 130 SSAVSGSGKFSFQDLKQVLAKY-ADTIPEGPLKKL----FVMVENDTKGRMSYITLVAV 183
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1;
calmodulin-like domain, EF calcium binding protein,
transferase; 2.00A {Arabidopsis thaliana}
Length = 166
Score = 43.3 bits (103), Expect = 4e-07
Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D D I+ DEL + + ++ + + + DQ+ D I ++EF +
Sbjct: 107 YFDKDGSGYITPDELQQACEEF---GVEDVRIEEL----MRDVDQDNDGRIDYNEFVAMM 159
Query: 61 ERTDVE 66
++ +
Sbjct: 160 QKGSIT 165
Score = 40.2 bits (95), Expect = 6e-06
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
M D D I+ +EL A L + GAN+ E ++ + + AD + I + EF A
Sbjct: 35 MIDADKSGQITFEELKAGLKRV-GANLKESEILDL----MQAADVDNSGTIDYKEFIAA 88
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 43.3 bits (103), Expect = 5e-07
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YD + + IS D + +L + +S E L ++ I E D +G + F+EF +
Sbjct: 99 LYDKEGNGYISTDVMREILAEL-DETLSSEDLDAM----IDEIDADGSGTVDFEEFMGVM 153
Query: 61 ERTD 64
D
Sbjct: 154 TGGD 157
Score = 37.5 bits (88), Expect = 7e-05
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 62
+ +S D++ +L ++ G ++ + + I E D G+ I FD F R
Sbjct: 26 EGSGRVSTDQIGIILEVL-GIQQTKSTIRQL----IDEFDPFGNGDIDFDSFKIIGAR 78
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 42.9 bits (102), Expect = 7e-07
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D + D I +EL +L G +++EE + + + ++D+N D I FDEF K
Sbjct: 104 IFDKNADGFIDIEELGEILRAT-GEHVTEEDIEDL----MKDSDKNNDGRIDFDEFLK 156
Score = 41.8 bits (99), Expect = 2e-06
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D D IS EL V+ M+ G N ++E+L +I I E D++G I F+EF +
Sbjct: 28 MFDADGGGDISTKELGTVMRML-GQNPTKEELDAI----IEEVDEDGSGTIDFEEFLVMM 82
Query: 61 ER 62
R
Sbjct: 83 VR 84
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding,
ME binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 42.6 bits (101), Expect = 8e-07
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D DN I+ +L V + G N++EE+L + I EAD+N D I DEF + +
Sbjct: 109 LFDDDNSGTITIKDLRRVAKEL-GENLTEEELQEM----IAEADRNDDNEIDEDEFIRIM 163
Query: 61 ERT 63
++T
Sbjct: 164 KKT 166
Score = 40.3 bits (95), Expect = 6e-06
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
++D D I EL + + G +E++ + I E D++G I F+EF
Sbjct: 36 LFDTDGSGTIDAKELKVAMRAL-GFEPKKEEIKKM----ISEIDKDGSGTIDFEEFL 87
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 41.4 bits (98), Expect = 9e-07
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D D IS EL V+ M+ G N ++E+L +I I E D++G I F+EF +
Sbjct: 28 MFDADGGGDISTKELGTVMRML-GQNPTKEELDAI----IEEVDEDGSGTIDFEEFLVMM 82
Query: 61 ER 62
R
Sbjct: 83 VR 84
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 42.4 bits (100), Expect = 1e-06
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
D + D+ ISRDE M+ + + A + D N D ++S +EF A
Sbjct: 102 AVDTNEDNNISRDEYGIFFGML---GLDKTM----APASFDAIDTNNDGLLSLEEFVIA 153
Score = 35.1 bits (81), Expect = 5e-04
Identities = 10/59 (16%), Positives = 17/59 (28%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+ I + + MV ++ + D N D IS DE+
Sbjct: 63 AVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFG 121
Score = 33.9 bits (78), Expect = 0.002
Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 1 MYDLDNDDAISRDELLAVLH-MMVGANISEEQLTSIAER-----TILEADQNGDQMISFD 54
D D D AI+R + ++ + + E + + G + I
Sbjct: 14 RIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDET 73
Query: 55 EFCKALER 62
F +++
Sbjct: 74 TFINSMKE 81
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 42.1 bits (100), Expect = 1e-06
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D IS L V + G N+++E+L + I EAD++GD +S EF +
Sbjct: 87 LFDDDETGKISFKNLKRVAKEL-GENLTDEELQEM----IDEADRDGDGEVSEQEFLR 139
Score = 40.9 bits (97), Expect = 3e-06
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D I EL + + G +E++ + I E D+ G ++F +F +
Sbjct: 14 LFDADGTGTIDVKELKVAMRAL-GFEPKKEEIKKM----ISEIDKEGTGKMNFGDFLTVM 68
Query: 61 ER 62
+
Sbjct: 69 TQ 70
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT
calmodulin chimera; calcium sensor, fluorescent protein;
HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A*
3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A*
3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 43.0 bits (101), Expect = 1e-06
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF +
Sbjct: 393 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQ 445
Score = 41.4 bits (97), Expect = 3e-06
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D D I+ EL V+ + G N +E +L + I E D +G+ I F EF +
Sbjct: 320 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDFPEFLTMM 374
Query: 61 ER 62
R
Sbjct: 375 AR 376
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 41.4 bits (98), Expect = 1e-06
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 1 MYDLDNDDAISRDELLAVL--HMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ D D I DEL L +++ + + + + D++GD MI DEF
Sbjct: 49 VIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF----LADGDKDGDGMIGVDEFAA 104
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 42.3 bits (100), Expect = 1e-06
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D D ++ DE L + G + + + + + D+NG + +EF +AL
Sbjct: 45 QLDRDGSRSLDADEFRQGLAKL-GLVLDQAEAEGV----CRKWDRNGSGTLDLEEFLRAL 99
Score = 31.5 bits (72), Expect = 0.010
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 11/65 (16%)
Query: 1 MYDLDNDDAISRDELLAVL----HMMV--GANISEEQLTSIAERTILEADQN-GDQMISF 53
D D ++ D+L V H V G +E L + D + D ++
Sbjct: 117 KLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRF----LDNFDSSEKDGQVTL 172
Query: 54 DEFCK 58
EF
Sbjct: 173 AEFQD 177
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 41.8 bits (99), Expect = 2e-06
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D+ IS L V + G +++E+L ++ I E D +GD I+ +EF
Sbjct: 104 LFDDDHTGKISIKNLRRVAKEL-GETLTDEELRAM----IEEFDLDGDGEINENEFIA 156
Score = 39.5 bits (93), Expect = 1e-05
Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
++D++ND + EL + + G + + ++ + I E D G ++ +D+F
Sbjct: 31 LFDMNNDGFLDYHELKVAMKAL-GFELPKREILDL----IDEYDSEGRHLMKYDDFY 82
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 41.1 bits (97), Expect = 2e-06
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 6/60 (10%)
Query: 1 MYDLDNDDAISRDELLAVL--HMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ D D I +EL L ++ + + + D +GD I +EF
Sbjct: 50 ILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAF----LAAGDTDGDGKIGVEEFQS 105
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 41.7 bits (98), Expect = 2e-06
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M D + D I+ DE A L + +S+ + A + D NG+ +S DE A+
Sbjct: 110 MCDKNADGQINADEFAAWLTAL---GMSKAE----AAEAFNQVDTNGNGELSLDELLTAV 162
Score = 38.6 bits (90), Expect = 3e-05
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMV---GANISEEQL-------TSIAERTILEADQNGDQM 50
+D D + A+ R + + G + ++ + + EA D
Sbjct: 15 RWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGS 74
Query: 51 ISFDEFCKALERTDVEQK 68
++ ++F + E EQ
Sbjct: 75 LTEEQFIRVTENLIFEQG 92
Score = 32.0 bits (73), Expect = 0.007
Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
+ +D +++ ++ + V ++ E + + D+N D I+ DEF
Sbjct: 68 GVGSDGSLTEEQFIRVTENLIFEQ-GEASFNRVLGPVVKGIVGMCDKNADGQINADEFAA 126
Query: 59 ALER 62
L
Sbjct: 127 WLTA 130
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 41.4 bits (98), Expect = 2e-06
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
M+D + D I +EL +L G I+E+ + + + + D+N D I +DEF +
Sbjct: 103 MFDKNADGYIDLEELKIMLQAT-GETITEDDIEEL----MKDGDKNNDGRIDYDEFLE 155
Score = 36.0 bits (84), Expect = 3e-04
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 1 MYDLD-NDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
++ L D +IS EL V+ M+ G N + E+L + I E D++G + FDEF
Sbjct: 26 IFVLGAEDGSISTKELGKVMRML-GQNPTPEELQEM----IDEVDEDGSGTVDFDEFLVM 80
Query: 60 LER 62
+ R
Sbjct: 81 MVR 83
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 41.9 bits (99), Expect = 2e-06
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D D + +E+ A L G +SE+ ++ + + D+ + FD++ +
Sbjct: 101 KRDSSGDGRLDSNEVRAALLSS-GYQVSEQTFQAL----MRKFDRQRRGSLGFDDYVELS 155
Query: 61 ER 62
Sbjct: 156 IF 157
Score = 35.0 bits (81), Expect = 7e-04
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
D D AIS EL A L G S + + D+N I+FDEF
Sbjct: 35 AVDTDGSGAISVPELNAALSSA-GVPFSLATTEKL----LHMYDKNHSGEITFDEFKD 87
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 41.8 bits (99), Expect = 2e-06
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 7/58 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+D D I+ DE+ + + + + I E DQ+ D I + EF
Sbjct: 90 YFDKDGSGYITLDEIQQACKDF---GLDDIHIDDM----IKEIDQDNDGQIDYGEFAA 140
Score = 40.3 bits (95), Expect = 7e-06
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M D DN I+ DEL L + G+ + E ++ + + AD + I + EF A
Sbjct: 18 MIDTDNSGTITFDELKDGLKRV-GSELMESEIKDL----MDAADIDKSGTIDYGEFIAAT 72
Query: 61 ER 62
Sbjct: 73 VH 74
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium
binding, EF-hand superfamily, S genomics, protein
structure initiative, PSI; 2.10A {Danio rerio} PDB:
2q4u_A
Length = 272
Score = 42.0 bits (98), Expect = 2e-06
Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Query: 1 MYDLDNDDAISRDELLAVLHMM---VGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
YD+ A+ E+ + M V +IS L E + D N D I E
Sbjct: 204 HYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELA 263
Query: 58 KAL 60
L
Sbjct: 264 LCL 266
Score = 40.8 bits (95), Expect = 6e-06
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 1 MYDLDNDDAISRDEL---LAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
YD D+ IS EL L L + I +L + + D+N D + ++
Sbjct: 112 KYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLA 171
Query: 58 KAL 60
+ L
Sbjct: 172 RIL 174
Score = 36.2 bits (83), Expect = 2e-04
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGA-----NISEEQLTSIAERTILEADQNGDQMISFDE 55
+D D++ I EL M+ I++E++ I + + D D + +E
Sbjct: 19 HFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEE 78
Query: 56 FCKALERTDVEQKMSIR 72
+ + + R
Sbjct: 79 LANMILPQEENFLLIFR 95
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4
PDB: 2pas_A 3pat_A
Length = 110
Score = 40.6 bits (96), Expect = 2e-06
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 1 MYDLDNDDAISRDELLAVL--HMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
D D I +EL VL G ++++ + + + AD++GD I DEF
Sbjct: 50 AIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAF----LKAADKDGDGKIGIDEFET 105
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 39.8 bits (94), Expect = 3e-06
Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + +I EL + + G ++ + ++ + + E D+ G+ I FD+F +
Sbjct: 15 LFDTNKTGSIDYHELKVAMRAL-GFDVKKPEILEL----MNEYDREGNGYIGFDDFLDIM 69
Query: 61 ER 62
Sbjct: 70 TE 71
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 40.8 bits (96), Expect = 3e-06
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ I+ + L ++ +S+E + + E D +GD ++ EFC +
Sbjct: 48 LLADPERHLITAESLRRNSGILGIEGMSKEDAQGM----VREGDLDGDGALNQTEFCVLM 103
Query: 61 ERT 63
R
Sbjct: 104 VRL 106
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 40.4 bits (95), Expect = 3e-06
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+DL+ + I L +L + G + +L + I E + S+ +F +
Sbjct: 40 EFDLNGNGDIDIMSLKRMLEKL-GVPKTHLELKKL----IGEVSSGSGETFSYPDFLR 92
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding
protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP:
a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A
1rk9_A 1g33_A
Length = 109
Score = 40.4 bits (95), Expect = 3e-06
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHMM--VGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ D D I DEL ++L ++S ++ ++ + D++GD I +EF
Sbjct: 49 ILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTL----MAAGDKDGDGKIGVEEFST 104
Query: 59 ALERT 63
+ +
Sbjct: 105 LVAES 109
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 41.0 bits (97), Expect = 3e-06
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D + IS EL V+ + G +++E++ + I EAD +GD ++++EF +
Sbjct: 92 VFDKDGNGYISAAELRHVMTNL-GEKLTDEEVDEM----IREADIDGDGQVNYEEFVQ 144
Score = 41.0 bits (97), Expect = 4e-06
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D D I+ EL V+ + G N +E +L + I E D +G+ I F EF +
Sbjct: 19 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDFPEFLTMM 73
Query: 61 ER 62
R
Sbjct: 74 AR 75
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 40.7 bits (95), Expect = 4e-06
Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+DL+ + I L +L + G + +L + I E ++ S+ +F +
Sbjct: 56 EFDLNGNGDIDIMSLKRMLEKL-GVPKTHLELKRL----IREVSSGSEETFSYSDFLR 108
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 40.9 bits (96), Expect = 4e-06
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ D D D A++ + L + E+ A + D +GD + E A
Sbjct: 106 VADTDGDGAVTVADTARALTAF---GVPEDL----ARQAAAALDTDGDGKVGETEIVPAF 158
Query: 61 ER 62
R
Sbjct: 159 AR 160
Score = 37.0 bits (86), Expect = 1e-04
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 10/72 (13%)
Query: 1 MYDLDNDDAISRDELLAVLHMM---VGANISEEQLTSIAERT-------ILEADQNGDQM 50
+D D + I R + M G ++ ++ AD++GDQ
Sbjct: 12 TFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQR 71
Query: 51 ISFDEFCKALER 62
I+ +EF +
Sbjct: 72 ITREEFVTGAVK 83
Score = 30.5 bits (69), Expect = 0.029
Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D D D I+R+E + + ++ +A + A D +GD ++ + +
Sbjct: 65 DRDGDQRITREEFVTG--AVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTAR 122
Query: 59 ALE 61
AL
Sbjct: 123 ALT 125
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 39.4 bits (93), Expect = 4e-06
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
M D DN I+ DEL L + G+ + E ++ + + AD + I + EF A
Sbjct: 31 MIDTDNSGTITFDELKDGLKRV-GSELMESEIKDL----MDAADIDKSGTIDYGEFIAA 84
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 40.7 bits (96), Expect = 4e-06
Identities = 8/62 (12%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D ++ +S +L +L + G +++ ++ + + + + + I + +F + +
Sbjct: 91 VFDKESTGKVSVGDLRYMLTGL-GEKLTDAEVDEL----LKGVEVDSNGEIDYKKFIEDV 145
Query: 61 ER 62
R
Sbjct: 146 LR 147
Score = 38.3 bits (90), Expect = 3e-05
Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D AI++D L L + G N + + + I ++ ++ D+ +
Sbjct: 12 LFDKKGQGAIAKDSLGDYLRAI-GYNPTNQLVQDIINA---DSSLRDASSLTLDQITGLI 67
Query: 61 ER 62
E
Sbjct: 68 EV 69
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 39.1 bits (92), Expect = 4e-06
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D++ D A+S +E+ A + A +E+ L + D +G+ I +EF K
Sbjct: 8 EIDVNGDGAVSYEEVKAFVSKK-RAIKNEQLL----QLIFKSIDADGNGEIDQNEFAKFY 62
Score = 24.4 bits (54), Expect = 1.6
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 42 EADQNGDQMISFDEFCKALER 62
E D NGD +S++E + +
Sbjct: 8 EIDVNGDGAVSYEEVKAFVSK 28
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A
2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B*
2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 40.5 bits (96), Expect = 4e-06
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D D I+ EL V+ + G N +E +L + I E D +G+ I F EF +
Sbjct: 18 LFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDM----INEVDADGNGTIDFPEFLSLM 72
Query: 61 ER 62
R
Sbjct: 73 AR 74
Score = 40.5 bits (96), Expect = 5e-06
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D + IS EL V+ + G ++++++ + I EAD +GD I+++EF +
Sbjct: 91 VFDRDGNGLISAAELRHVMTNL-GEKLTDDEVDEM----IREADIDGDGHINYEEFVR 143
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR
{Rattus norvegicus} PDB: 2g9b_A
Length = 263
Score = 41.0 bits (96), Expect = 5e-06
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 1 MYDLDNDDAISRDELLAVLHMM---VGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
YD D+ I +EL L + + + +L + + D N D + E
Sbjct: 111 KYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMA 170
Query: 58 KALERTD 64
+ L +
Sbjct: 171 RLLPVQE 177
Score = 39.1 bits (91), Expect = 3e-05
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+YD D + I +EL A+L + N E + +I+ + + + L
Sbjct: 199 LYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALIL 258
Score = 37.9 bits (88), Expect = 6e-05
Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAE--RTILEADQNGDQMISFDEFCK 58
+D D + EL ++ + + L E + + Q D I E
Sbjct: 24 HFDADGSGYLEGKELQNLIQEL-LQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAH 82
Query: 59 ALERTD 64
L +
Sbjct: 83 VLPTEE 88
Score = 27.5 bits (61), Expect = 0.30
Identities = 11/63 (17%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFC 57
Y +D I EL VL + + ++ D + I +E
Sbjct: 67 YGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELK 126
Query: 58 KAL 60
L
Sbjct: 127 NFL 129
Score = 24.4 bits (53), Expect = 4.6
Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEF 56
++D +ND + E+ +L + + + Q + + +A DQ+G+ I +E
Sbjct: 155 LFDSNNDGKLELTEMARLL-PVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL 213
Query: 57 CKALER 62
L+
Sbjct: 214 DALLKD 219
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 39.8 bits (93), Expect = 5e-06
Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D ++ + +L +++ + QL SI +D + D ++ +EF A+
Sbjct: 22 SHDKTMSGHLTGPQARTILMQ---SSLPQAQLASIWN----LSDIDQDGKLTAEEFILAM 74
Query: 61 ERTDVEQK 68
DV
Sbjct: 75 HLIDVAMS 82
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 145
Score = 40.2 bits (95), Expect = 5e-06
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
D + + I EL +L + G ++ ++ + + E +GD I+++ F
Sbjct: 84 ALDKEGNGTIQEAELRQLLLNL-GDALTSSEVEEL----MKEVSVSGDGAINYESFVD 136
Score = 34.4 bits (80), Expect = 9e-04
Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 13/72 (18%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC--- 57
++D DND +S +EL + L + G N + +L +I + + F
Sbjct: 13 IFDKDNDGKVSIEELGSALRSL-GKNPTNAELNTI----KGQLNAKE---FDLATFKTVY 64
Query: 58 --KALERTDVEQ 67
T+ +
Sbjct: 65 RKPIKTPTEQSK 76
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 39.6 bits (93), Expect = 6e-06
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMM--VGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ D D I DEL L ++ + + + AD +GD I +EF +
Sbjct: 49 ILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTF----LAAADHDGDGKIGAEEFQE 104
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus}
SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 39.6 bits (93), Expect = 6e-06
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMM--VGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
D D + DEL L ++E + S+ + AD +GD I DEF +
Sbjct: 49 FIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSL----MDAADNDGDGKIGADEFQE 104
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 40.2 bits (94), Expect = 7e-06
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+DL+N+ I L ++ + G + ++ + I E IS+ +F
Sbjct: 58 EFDLNNEGEIDLMSLKRMMEKL-GVPKTHLEMKKM----ISEVTGGVSDTISYRDFVN 110
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 39.8 bits (94), Expect = 7e-06
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D DN +IS EL V+ + G + SE ++ + + E D +G+ I F EF +
Sbjct: 19 LFDKDNSGSISASELATVMRSL-GLSPSEAEVADL----MNEIDVDGNHAIEFSEFLALM 73
Query: 61 ER 62
R
Sbjct: 74 SR 75
Score = 35.9 bits (84), Expect = 2e-04
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + D IS EL VL + G +++ ++ + + E +G I+ +F L
Sbjct: 92 VFDKNGDGLISAAELKHVLTSI-GEKLTDAEVDEM----LREVS-DGSGEINIKQFAALL 145
Query: 61 ER 62
+
Sbjct: 146 SK 147
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 39.0 bits (91), Expect = 8e-06
Identities = 6/55 (10%), Positives = 23/55 (41%)
Query: 6 NDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +++++L ++ + ++ ++ + + DQ D + F F +
Sbjct: 21 DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLI 75
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural
genomics, seattle S genomics center for infectious
disease, ssgcid; 1.90A {Entamoeba histolytica} PDB:
3sia_A 3sib_A
Length = 220
Score = 40.1 bits (94), Expect = 9e-06
Identities = 7/62 (11%), Positives = 15/62 (24%), Gaps = 6/62 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M + E+L L + G I++ + G + +
Sbjct: 125 MNARARSGTLEPHEILPALQQL-GFYINQR-----TSLLLHRLFARGMAFCDLNCWIAIC 178
Query: 61 ER 62
Sbjct: 179 AF 180
Score = 35.5 bits (82), Expect = 5e-04
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D D + +EL+ G +S + + + D + + ISF EF
Sbjct: 59 GVDRDRSGTLEINELMMGQFPG-GIRLSPQTALRM----MRIFDTDFNGHISFYEFMAMY 113
Query: 61 E 61
+
Sbjct: 114 K 114
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer,
domain-swapping, EF-hand; 1.75A {Chenopodium album}
SCOP: a.39.1.10 PDB: 1h4b_A
Length = 86
Score = 38.4 bits (90), Expect = 1e-05
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D + D IS EL L + +++ +++ + + E D +GD ISFDEF
Sbjct: 19 RFDTNGDGKISSSELGDALKTL--GSVTPDEVRRM----MAEIDTDGDGFISFDEFTDFA 72
Query: 61 ER 62
Sbjct: 73 RA 74
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially
structured protein, CAM-like; NMR {Entamoeba
histolytica} PDB: 2lc5_A
Length = 85
Score = 38.4 bits (90), Expect = 1e-05
Identities = 13/62 (20%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D DND+ ++ +EL V+ + GAN ++++++ I + + D++ + F +
Sbjct: 22 LFDKDNDNKLTAEELGTVMRAL-GANPTKQKISEI----VKDYDKDNSGKFDQETFLTIM 76
Query: 61 ER 62
Sbjct: 77 LE 78
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 38.1 bits (89), Expect = 2e-05
Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 7/60 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D + + R+E A+ + + E D + D I+F EF +
Sbjct: 35 ACDANRSGRLEREEFRALCTEL---RVRPADA----EAVFQRLDADRDGAITFQEFARGF 87
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould,
EF-hand; 1.75A {Physarum polycephalum}
Length = 142
Score = 39.0 bits (92), Expect = 2e-05
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D + I+++ L VL G + + EAD G+ I F EF +
Sbjct: 14 LFDSERTGFITKEGLQTVLKQF-GVRVEPAAFNEM----FNEADATGNGKIQFPEFLSMM 68
Query: 61 ER 62
R
Sbjct: 69 GR 70
Score = 34.0 bits (79), Expect = 0.001
Identities = 8/58 (13%), Positives = 17/58 (29%), Gaps = 6/58 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+D + I + L L + G + + + + I +D F
Sbjct: 87 TFDPEGTGYIPKAALQDALLNL-GDRLKPHEFAEF----LGITETE-KGQIRYDNFIN 138
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 39.4 bits (92), Expect = 2e-05
Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 10/73 (13%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISE----------EQLTSIAERTILEADQNGDQM 50
YD ++D I D+ + + + L I + AD+N D+
Sbjct: 21 FYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQ 80
Query: 51 ISFDEFCKALERT 63
++ +E+ K
Sbjct: 81 VTKEEWLKMWAEC 93
Score = 38.7 bits (90), Expect = 3e-05
Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 7/60 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ D D+ I + E V I + + G M++ + F +
Sbjct: 117 VNDTSGDNIIDKHEYSTVYMSY---GIPKSD----CDAAFDTLSDGGKTMVTREIFARLW 169
Score = 34.0 bits (78), Expect = 0.001
Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFCK 58
D + D+ ++++E L + V + E L + + D +GD +I E+
Sbjct: 74 DENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYST 133
Query: 59 ALERTDVEQ 67
+ +
Sbjct: 134 VYMSYGIPK 142
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 39.1 bits (92), Expect = 2e-05
Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 5/68 (7%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ D D +I + L +L G + E++ + + + + C +
Sbjct: 103 VLDPDGKGSIKKSFLEELLTTG-GGRFTPEEI----KNMWAAFPPDVAGNVDYKNICYVI 157
Query: 61 ERTDVEQK 68
+ +
Sbjct: 158 THGEDAEG 165
Score = 32.2 bits (74), Expect = 0.006
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 8/62 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ D + D I +D+L M N+ E+L ++ + I+F F
Sbjct: 33 VIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAM--------IKEASGPINFTVFLTMF 84
Query: 61 ER 62
Sbjct: 85 GE 86
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin
V, chicken, molecular motor, ATPase, ELC, IQ motif,
muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens}
SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B*
1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 38.7 bits (91), Expect = 2e-05
Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D + + + EL VL + G ++EE++ T+L ++ + I+++ F K
Sbjct: 95 VFDKEGNGKVMGAELRHVLTTL-GEKMTEEEV-----ETVLAGHEDSNGCINYEAFLK 146
Score = 35.3 bits (82), Expect = 4e-04
Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D I + V+ + G N + ++ + ++D+ + + F+ F L
Sbjct: 18 LFDRVGDGKILYSQCGDVMRAL-GQNPTNAEVLKVLGN--PKSDELKSRRVDFETFLPML 74
Query: 61 ER 62
+
Sbjct: 75 QA 76
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos
taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A
1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A
1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 37.6 bits (88), Expect = 2e-05
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 1 MYDLDNDDA--ISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++ D IS++EL V+ + G ++ + T + I E D+NGD +SF+EF
Sbjct: 13 VFAAKEGDPNQISKEELKLVMQTL-GPSLLKGMST--LDEMIEEVDKNGDGEVSFEEFLV 69
Query: 59 ALERT 63
+++
Sbjct: 70 MMKKI 74
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 38.6 bits (91), Expect = 2e-05
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D + I D L +L M G ++E++ + EA + ++ EF + L
Sbjct: 84 CFDEEASGFIHEDHLRELLTTM-GDRFTDEEV----DEMYREAPIDKKGNFNYVEFTRIL 138
Score = 32.5 bits (75), Expect = 0.004
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 9/62 (14%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M D + D I +++L +L M G N ++E L + I+F F
Sbjct: 15 MIDQNRDGFIDKEDLHDMLASM-GKNPTDEYLEGM--------MSEAPGPINFTMFLTMF 65
Query: 61 ER 62
Sbjct: 66 GE 67
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP:
a.39.1.10
Length = 78
Score = 37.5 bits (88), Expect = 2e-05
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+D + D IS EL L + G+ ++E +R + E D +GD I F+EF
Sbjct: 11 RFDTNGDGKISLSELTDALRTL-GSTSADE-----VQRMMAEIDTDGDGFIDFNEFIS 62
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 38.8 bits (91), Expect = 2e-05
Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 15/71 (21%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGD--------QMIS 52
D D D IS+ ++ + ++ + + + L IS
Sbjct: 116 KIDKDEDGYISKSDI---VSLVHDKVLDNNDIDNF----FLSVHSIKKGIPREHIINKIS 168
Query: 53 FDEFCKALERT 63
F EF + T
Sbjct: 169 FQEFKDYMLST 179
Score = 37.7 bits (88), Expect = 7e-05
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D +++ ++S E+ VL + I + + I + D N I++ EF
Sbjct: 47 KLDTNHNGSLSHREIYTVLASV---GIKKWDINRI----LQALDINDRGNITYTEFMAGC 99
Query: 61 ERTDVEQKMSIR 72
R + ++
Sbjct: 100 YRWKNIESTFLK 111
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 37.4 bits (87), Expect = 4e-05
Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 7/59 (11%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D D D +S E+ + + + L I D +S D+F A
Sbjct: 19 TDKDMDGFVSGLEVREI---FLKTGLPSTLLAHIWS----LCDTKDCGKLSKDQFALAF 70
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 38.4 bits (90), Expect = 4e-05
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
YD DN I ++EL L G +S++ + I + D+ G I+FD+F +
Sbjct: 82 TYDRDNSGMIDKNELKQALSGF-GYRLSDQFHDIL----IRKFDRQGRGQIAFDDFIQGC 136
Query: 61 ER 62
Sbjct: 137 IV 138
Score = 31.8 bits (73), Expect = 0.009
Identities = 14/62 (22%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D D IS EL L + + SI I D+ ++F EF
Sbjct: 15 RVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSI----ISMFDRENKAGVNFSEFTGVW 70
Query: 61 ER 62
+
Sbjct: 71 KY 72
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 38.0 bits (88), Expect = 5e-05
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 10/83 (12%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGAN----------ISEEQLTSIAERTILEADQNGDQM 50
D+++D +I ++ ++ N + L AD N D +
Sbjct: 17 FLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDV 76
Query: 51 ISFDEFCKALERTDVEQKMSIRF 73
+S++E+ E+T K
Sbjct: 77 VSWEEYLAMWEKTIATCKSVADL 99
Score = 37.2 bits (86), Expect = 1e-04
Identities = 5/62 (8%), Positives = 13/62 (20%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D+ D + +E ++ G + + +
Sbjct: 113 GMDVSGDGIVDLEEFQNYCKNF-QLQCAD------VPAVYNVITDGGKVTFDLNRYKELY 165
Query: 61 ER 62
R
Sbjct: 166 YR 167
Score = 34.5 bits (79), Expect = 9e-04
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEA----DQNGDQMISFDEFC 57
D++ DD +S +E LA+ + S L + + I D +GD ++ +EF
Sbjct: 69 ADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQ 128
Query: 58 KALERTDVEQ 67
+ ++
Sbjct: 129 NYCKNFQLQC 138
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis
complex; NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 36.2 bits (84), Expect = 9e-05
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 7/60 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D + I + +L+ I +D + D ++ DEFC A
Sbjct: 17 TIQPDLNGFIPGSAAKEFFTKS---KLPILELSHI----WELSDFDKDGALTLDEFCAAF 69
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 36.1 bits (83), Expect = 1e-04
Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGA-----------NISEEQLTSIAERTILEADQNGDQ 49
++D+++D + EL A+ + EE+ + E + D N D+
Sbjct: 28 LHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDR 87
Query: 50 MISFDEFCKALERTD 64
+++ +EF + +R +
Sbjct: 88 LVTLEEFLASTQRKE 102
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z
1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z
3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z
2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 36.8 bits (86), Expect = 1e-04
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Query: 1 MYDL--DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D A+ +L V + G N E + + + G++ + F+EF
Sbjct: 17 LFDFWDGRDGAVDAFKLGDVCRCL-GINPRNEDV-----FAVGGTHKMGEKSLPFEEFLP 70
Query: 59 ALER 62
A E
Sbjct: 71 AYEG 74
Score = 34.1 bits (79), Expect = 0.001
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEAD--QNGDQMISFDEFCK 58
+D + IS EL VL + G +S+E + I I D ++ + + +++F K
Sbjct: 92 TFDREGQGFISGAELRHVLTAL-GERLSDEDVDEI----IKLTDLQEDLEGNVKYEDFVK 146
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 36.5 bits (85), Expect = 2e-04
Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERTD 64
+ D + L L G S++++ ++ + EA +G+ +I +F + L +
Sbjct: 137 EGDGKCKEETLKRSLTTW-GEKFSQDEV----DQALSEAPIDGNGLIDIKKFAQILTKGA 191
Query: 65 VEQ 67
E+
Sbjct: 192 KEE 194
Score = 30.7 bits (70), Expect = 0.019
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 9/57 (15%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFC 57
+ D D D IS++++ A + G +E++L S+ I+F F
Sbjct: 65 LIDQDKDGFISKNDIRATFDSL-GRLCTEQELDSM--------VAEAPGPINFTMFL 112
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 35.5 bits (82), Expect = 2e-04
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D IS + +S +L+ I E +D + D ++ EFC A
Sbjct: 31 LQPDPSSFISGSVAKNFFTK---SKLSIPELSYIWE----LSDADCDGALTLPEFCAAF 82
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y
1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y
3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y
2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 36.0 bits (84), Expect = 2e-04
Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D ++ + + +L M G N +++++ T EA G + + +F +
Sbjct: 95 MFDEQETKKLNIEYIKDLLENM-GDNFNKDEM----RMTFKEAPVEGGK-FDYVKFTAMI 148
Query: 61 ERTDVEQ 67
+ + E+
Sbjct: 149 KGSGEEE 155
Score = 30.6 bits (70), Expect = 0.022
Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M D+D D +S++++ A+ + G +++LT++ + ++F F
Sbjct: 26 MIDVDRDGFVSKEDIKAISEQL-GRAPDDKELTAM--------LKEAPGPLNFTMFLSIF 76
Query: 61 ER 62
Sbjct: 77 SD 78
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins,
protein dynamics, binding protein; 2.10A {Homo sapiens}
PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 35.2 bits (81), Expect = 2e-04
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ IS+ +L + +S+ A++ I D N D ISFDE+ +
Sbjct: 24 YSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLI 81
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 35.2 bits (81), Expect = 2e-04
Identities = 10/56 (17%), Positives = 25/56 (44%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +++ EL +L + + + + + ++ + D N D + F E+C L
Sbjct: 27 GDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFL 82
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand;
NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 35.6 bits (83), Expect = 3e-04
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 9/62 (14%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D I + + +L G N + + I E + + ++F + L
Sbjct: 13 LFDRHGTGRIPKTSIGDLLRAC-GQNPTLAE--------ITEIESTLPAEVDMEQFLQVL 63
Query: 61 ER 62
R
Sbjct: 64 NR 65
Score = 31.3 bits (72), Expect = 0.011
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D I EL VL + G +S E++ + + D M+++ +F +
Sbjct: 84 VFDKDATGMIGVGELRYVLTSL-GEKLSNEEM----DELLKGVPVK-DGMVNYHDFVQ 135
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 34.8 bits (81), Expect = 6e-04
Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
++D D I+ ++ + + G N + ++ I ++ I+F+EF L
Sbjct: 16 LFDRTGDAKITASQVGDIARAL-GQNPTNAEINKILGN--PSKEEMNAAAITFEEFLPML 72
Query: 61 ER 62
+
Sbjct: 73 QA 74
Score = 34.4 bits (80), Expect = 8e-04
Identities = 11/58 (18%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D + + + EL VL + G ++EE++ +++ ++ + I+++ F K
Sbjct: 93 VFDKEGNGTVMGAELRHVLATL-GEKMTEEEV-----EELMKGQEDSNGCINYEAFVK 144
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding
protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A
1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X*
3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A*
3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 34.0 bits (78), Expect = 6e-04
Identities = 10/56 (17%), Positives = 24/56 (42%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ + + EL +++ + + E + + ++ + D NGD F EF +
Sbjct: 23 GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFV 78
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin
regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 34.5 bits (80), Expect = 0.001
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 8/64 (12%)
Query: 1 MYDL--DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
++D D + ++ +L + G N +E Q+ + G++ +E
Sbjct: 17 LFDFWDGRDGDVDAAKVGDLLRCL-GMNPTEAQV-----HQHGGTKKMGEKAYKLEEILP 70
Query: 59 ALER 62
E
Sbjct: 71 IYEE 74
Score = 33.3 bits (77), Expect = 0.002
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEAD--QNGDQMISFDEFCK 58
+D + IS E+ VL M+ G I+E+Q I D ++ D I +++ K
Sbjct: 93 TFDREGQGLISSAEIRNVLKML-GERITEDQCNDI----FTFCDIREDIDGNIKYEDLMK 147
Query: 59 AL 60
+
Sbjct: 148 KV 149
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 34.6 bits (78), Expect = 0.001
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 10/67 (14%)
Query: 3 DLD---NDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
LD D +S EL + ++ + R D + D+ I+ DE+
Sbjct: 163 QLDQHPIDGYLSHTELAPLRAPLI-------PMEHCTTRFFETCDLDNDKYIALDEWAGC 215
Query: 60 LERTDVE 66
+
Sbjct: 216 FGIKQKD 222
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal
binding protein, binding protein; NMR {Homo sapiens}
PDB: 3c1v_A
Length = 113
Score = 33.7 bits (77), Expect = 0.001
Identities = 10/56 (17%), Positives = 25/56 (44%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +++ EL +L + + + + + ++ + D N D + F E+C L
Sbjct: 36 GDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFL 91
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 33.7 bits (77), Expect = 0.001
Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 7/56 (12%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
I+ D+ + + + L I AD N D + EF A+
Sbjct: 44 PISGFITGDQARNFFFQ---SGLPQPVLAQI----WALADMNNDGRMDQVEFSIAM 92
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response,
metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A*
2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 33.2 bits (76), Expect = 0.001
Identities = 12/56 (21%), Positives = 24/56 (42%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ D +S+ EL +L + I + ++ + D N D+ + F EF +
Sbjct: 26 GHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLV 81
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 34.3 bits (78), Expect = 0.002
Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 41/103 (39%)
Query: 7 DDAISRDE-----LLAVLHMMVGANISEEQLTSIAERT--ILEADQ-------NG-DQMI 51
+D++ +E +L++ +N+++EQ+ +T L A + NG ++
Sbjct: 325 EDSLENNEGVPSPMLSI------SNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLV 378
Query: 52 ------SFDEFCKALER----TDVEQ----------KMSIRFL 74
S L + + ++Q K S RFL
Sbjct: 379 VSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFL 421
Score = 32.3 bits (73), Expect = 0.007
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 20/83 (24%)
Query: 8 DAISRDE-------LLAVLHMMVGANISEEQLTSIAERT------ILE-ADQN--GDQM- 50
A+ RDE ++A+ V A+ S+E L + ER ++E + N Q
Sbjct: 1795 VAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYV 1854
Query: 51 ISFDEFCKALER-TDVEQKMSIR 72
+ D +AL+ T+V + ++
Sbjct: 1855 AAGDL--RALDTVTNVLNFIKLQ 1875
Score = 29.2 bits (65), Expect = 0.095
Identities = 10/62 (16%), Positives = 21/62 (33%), Gaps = 11/62 (17%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA-LERT 63
+D+ + EL+ V + + ++ + +L EF LE
Sbjct: 50 ADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQ--VLNL--------CLTEFENCYLEGN 99
Query: 64 DV 65
D+
Sbjct: 100 DI 101
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 32.9 bits (75), Expect = 0.002
Identities = 10/56 (17%), Positives = 25/56 (44%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +++ EL +L + + + + + ++ + D N D + F E+C L
Sbjct: 24 GDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFL 79
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 32.9 bits (76), Expect = 0.003
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M+D D I D L +L M G N S+E++ + +A ++ ++++
Sbjct: 93 MFDEDGQGFIPEDYLKDLLENM-GDNFSKEEI----KNVWKDAPLK-NKQFNYNKMVDIK 146
Query: 61 ERTDVE 66
+ + E
Sbjct: 147 GKAEDE 152
Score = 28.3 bits (64), Expect = 0.13
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 9/62 (14%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
M D D D I ++L + + G +++L ++ + ++F F
Sbjct: 24 MIDQDRDGFIGMEDLKDMFSSL-GRVPPDDELNAM--------LKECPGQLNFTAFLTLF 74
Query: 61 ER 62
Sbjct: 75 GE 76
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15,
EPS15; EH domain, EF-hand, solution structure, S100
protein; NMR {Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 32.1 bits (73), Expect = 0.003
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ N + + A L + + + L I + AD +G ++S EF AL
Sbjct: 20 VEAGNTGRVLALDAAAFL---KKSGLPDLILGKIWD----LADTDGKGVLSKQEFFVAL 71
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin),
ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2
PDB: 1nsh_A
Length = 99
Score = 32.1 bits (73), Expect = 0.004
Identities = 12/56 (21%), Positives = 26/56 (46%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
N+ IS+ E L ++ + A ++ + +R + + D + D + F EF +
Sbjct: 27 GNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLI 82
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 32.1 bits (73), Expect = 0.004
Identities = 9/56 (16%), Positives = 24/56 (42%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +++ EL ++ + + + ++ + + D NGD + F EF +
Sbjct: 23 GSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFV 78
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer,
X-type four-helix bundle, metal binding protein; NMR
{Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A
2kbm_A 2l0p_A 2jpt_A
Length = 93
Score = 31.7 bits (72), Expect = 0.006
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +S+ EL +L + + + ++ ++ + E D+NGD + F EF +
Sbjct: 23 GDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLV 78
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of
cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB:
1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S
3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 32.4 bits (74), Expect = 0.006
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D+D I EL G +++E + I R + + FD F L
Sbjct: 85 QFDVDRSGTIGSSELPGAFEAA-GFHLNEHLYSMIIRR-----YSDEGGNMDFDNFISCL 138
Query: 61 ER 62
R
Sbjct: 139 VR 140
Score = 24.7 bits (54), Expect = 2.6
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 5/62 (8%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERT----ILEADQNGDQMISFDEFCKAL 60
+D +S EL+ +L+ V + + T + D + + F+EF
Sbjct: 15 GDDMEVSATELMNILNK-VVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 73
Query: 61 ER 62
Sbjct: 74 NN 75
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 31.8 bits (73), Expect = 0.008
Identities = 6/62 (9%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D + +++ ++ +L G +++++ + + I + FC+ +
Sbjct: 92 HFDNNCTGYLTKSQMKNILTTW-GDALTDQEAIDA----LNAFSSEDN--IDYKLFCEDI 144
Query: 61 ER 62
+
Sbjct: 145 LQ 146
Score = 31.4 bits (72), Expect = 0.011
Identities = 7/62 (11%), Positives = 18/62 (29%), Gaps = 9/62 (14%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ + IS D + G S I + ++++++ + L
Sbjct: 23 FNEKSSGGKISIDNASYNARKL-GLAPSSIDEKKI--------KELYGDNLTYEQYLEYL 73
Query: 61 ER 62
Sbjct: 74 SI 75
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 32.0 bits (73), Expect = 0.008
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D D + EL L M G +S + + SI NG I+FD++
Sbjct: 111 SFDTDRSGTVDPQELQKALTTM-GFRLSPQAVNSI----AKRYSTNGK--ITFDDYIACC 163
Query: 61 ER 62
+
Sbjct: 164 VK 165
Score = 26.7 bits (59), Expect = 0.71
Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERT-ILEADQNGDQMISFDEFCKALER 62
D I DEL L G + R + D++ + F+EF +
Sbjct: 44 GQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV 101
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand,
EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB:
2jxc_A 1f8h_A 1ff1_A
Length = 106
Score = 31.3 bits (71), Expect = 0.008
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERTD 64
+ +S D++ VL + + L + E +D + D M+ DEF A+
Sbjct: 26 PVNGFLSGDKVKPVLLNS---KLPVDILGRVWE----LSDIDHDGMLDRDEFAVAMFLVY 78
Query: 65 VEQK 68
+
Sbjct: 79 CALE 82
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1mr8_A
Length = 93
Score = 30.5 bits (69), Expect = 0.012
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 4/56 (7%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
N A+ RD+L +L I ++ + E D N D ++F EF +
Sbjct: 24 GNFHAVYRDDLKKLLETESPQYIRKKGA----DVWFKELDINTDGAVNFQEFLILV 75
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 30.6 bits (69), Expect = 0.014
Identities = 11/56 (19%), Positives = 27/56 (48%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +S+ EL +L+ + + ++ + E+ + + D N D + F+EF +
Sbjct: 24 GDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLV 79
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8
PDB: 1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 30.8 bits (70), Expect = 0.019
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D D + EL + +M G +S + LT+I + +NG I FD++
Sbjct: 78 TVDQDGSGTVEHHELRQAIGLM-GYRLSPQTLTTI----VKRYSKNG--RIFFDDYVACC 130
Query: 61 ER 62
+
Sbjct: 131 VK 132
Score = 26.2 bits (58), Expect = 0.78
Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERT-ILEADQNGDQMISFDEFCKALER 62
D + +EL L G N + + R I D++ + F+ F +
Sbjct: 11 GQDGEVDAEELQRCLTQS-GINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA 68
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 30.0 bits (68), Expect = 0.020
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ + +S++EL ++ + + + + E D+NGD +SF+EF +
Sbjct: 21 GDPNQLSKEELKQLIQAEFPSLLKGPRT---LDDLFQELDKNGDGEVSFEEFQVLV 73
>3a8r_A Putative uncharacterized protein; EF-hand, membrane,
oxidoreductase, transmembrane, calcium BI protein; 2.40A
{Oryza sativa japonica group}
Length = 179
Score = 30.4 bits (68), Expect = 0.029
Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGAN---ISEEQLTSIAERTILEADQNGDQMISFDEFC 57
M D + D ++ +E+ ++ + AN +E+ + E D I ++
Sbjct: 106 MVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLE 165
Query: 58 KALERTDVE 66
L ++ E
Sbjct: 166 ALLLQSPSE 174
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo
sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Length = 139
Score = 30.3 bits (68), Expect = 0.030
Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALERTD 64
+ I+ + + + L I + AD + D ++ +EF A
Sbjct: 62 PVNGKITGANAKKEMVK---SKLPNTVLGKIWK----LADVDKDGLLDDEEFALANHLIK 114
Query: 65 VEQK 68
V+ +
Sbjct: 115 VKLE 118
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme
delta1; phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 30.6 bits (68), Expect = 0.032
Identities = 9/69 (13%), Positives = 24/69 (34%), Gaps = 9/69 (13%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL- 60
D + D+ ++ EL L + + + + E D + + +E
Sbjct: 20 ADKNKDNKMNFKELKDFLKEL-NIQVDDGYA----RKIFRECDHSQTDSLEDEEIETFYK 74
Query: 61 ---ERTDVE 66
+R +++
Sbjct: 75 MLTQRAEID 83
Score = 24.5 bits (52), Expect = 4.9
Identities = 9/39 (23%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 25 ANISEEQLTSIAERTIL-EADQNGDQMISFDEFCKALER 62
++ + Q + L +AD+N D ++F E L+
Sbjct: 1 GSMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKE 39
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 29.8 bits (67), Expect = 0.033
Identities = 10/55 (18%), Positives = 21/55 (38%)
Query: 6 NDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ + + EL +L + E + + D N D + F E+ ++L
Sbjct: 25 DKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSL 79
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens}
PDB: 2rgi_A 4duq_A
Length = 98
Score = 29.4 bits (66), Expect = 0.035
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +S+ E+ +LH + + + E+ ++ + D+N DQ + F E+ L
Sbjct: 25 GDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFL 80
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 30.0 bits (68), Expect = 0.048
Identities = 6/54 (11%), Positives = 9/54 (16%), Gaps = 8/54 (14%)
Query: 3 DLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEF 56
D I+ + + A S D F
Sbjct: 392 MGDESACIAYIRI----TQYLDAGGIPRTAQSE----ETRVWHRRDGKWQIVHF 437
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 29.3 bits (66), Expect = 0.073
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 7/62 (11%)
Query: 1 MYDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+D D + EL L M G ++ + + SI +G I+FD++
Sbjct: 80 SFDSDRSGTVDPQELQKALTTM-GFRLNPQTVNSI----AKRYSTSGK--ITFDDYIACC 132
Query: 61 ER 62
+
Sbjct: 133 VK 134
Score = 23.9 bits (52), Expect = 6.3
Identities = 11/58 (18%), Positives = 18/58 (31%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALER 62
D I DEL L A + + D++ + F+EF +
Sbjct: 13 GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV 70
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1irj_A*
Length = 113
Score = 28.7 bits (64), Expect = 0.10
Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQL-TSIAERTILEADQNGDQMISFDEFC 57
+ D +++ E ++ + + +E + E + + D N D+ +SF+EF
Sbjct: 26 GHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium
free, signaling protein; HET: MSE; 1.15A {Homo sapiens}
SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A
1jwd_A 2cnp_A 2jtt_A
Length = 90
Score = 27.4 bits (61), Expect = 0.21
Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +S+ EL ++ + + R + + D+N DQ ++F E+ L
Sbjct: 24 GDKHTLSKKELKELIQKELTIGSKLQDAE--IARLMEDLDRNKDQEVNFQEYVTFL 77
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 27.4 bits (61), Expect = 0.25
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
+ +SR EL ++ + +E + + D+N DQ I F E+ L
Sbjct: 24 GSKLTLSRKELKELIKKELCLGEMKES---SIDDLMKSLDKNSDQEIDFKEYSVFL 76
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A
{Homo sapiens} SCOP: a.39.1.3
Length = 151
Score = 27.1 bits (59), Expect = 0.41
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 12/74 (16%)
Query: 3 DLD---NDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKA 59
LD D +S EL + ++ + R D + D+ I+ DE+
Sbjct: 85 QLDQHPIDGYLSHTELAPLRAPLI-------PMEHCTTRFFETCDLDNDKYIALDEWAGC 137
Query: 60 LERT--DVEQKMSI 71
D+++ + I
Sbjct: 138 FGIKQKDIDKDLVI 151
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2
PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 26.7 bits (59), Expect = 0.45
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 5 DNDDAISRDELLAVLHMMVGANISEEQLTSIA--ERTILEADQNGDQMISFDEFC 57
DD I + LL ++ +S + D+N D+ I F EF
Sbjct: 21 RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFL 75
>1eu1_A Dimethyl sulfoxide reductase; molybdenum, molybdenum cofactor,
DMSO, molybdopte oxidoreductase; HET: GLC MGD EPE; 1.30A
{Rhodobacter sphaeroides} SCOP: b.52.2.2 c.81.1.1 PDB:
4dmr_A* 1dmr_A* 1e5v_A* 1h5n_A* 2dmr_A* 3dmr_A* 1e61_A*
1e60_A* 1e18_A* 1dms_A*
Length = 780
Score = 27.0 bits (60), Expect = 0.57
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 29 EEQLTSIAERTILEADQNGDQMISFDEF 56
++S E + +A+ M SF++F
Sbjct: 535 MGWISSFYEAAVKQAEFKNVAMPSFEDF 562
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 26.3 bits (58), Expect = 0.63
Identities = 8/55 (14%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 6 NDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKAL 60
D++S +E ++ + + + + + D N D + F+E+ + +
Sbjct: 37 RKDSLSVNEFKELVTQQLPHLLKDVG---SLDEKMKSLDVNQDSELKFNEYWRLI 88
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex,
cytokine activation, complex (transcription factor/DNA),
transcription/DNA complex; HET: DNA PTR; 2.25A {Mus
musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Length = 596
Score = 26.0 bits (56), Expect = 1.2
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 4 LDNDDAISRDELLAVLHM----MVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ D++ VL +S EQLT++AE+ + I++ +FCK
Sbjct: 367 FTKPPIGTWDQVAEVLSWQFSSTTKRGLSIEQLTTLAEKLLGPGVNYSGCQITWAKFCK 425
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex,
membrane protein, endocytosis; HET: ANP; 3.10A {Mus
musculus}
Length = 550
Score = 25.1 bits (54), Expect = 2.4
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 43 ADQNGDQMISFDEFCKAL 60
+D + D M+ +EF A
Sbjct: 500 SDVDRDGMLDDEEFALAS 517
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases,
like, EF-hand, structural genomics, structural genomics
CON SGC, hydrolase; 1.80A {Homo sapiens}
Length = 174
Score = 24.9 bits (54), Expect = 2.6
Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 8/61 (13%)
Query: 5 DNDDAISRDELLAVLHMM---VGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
+ + +L + G IS E L + R + +SF L
Sbjct: 87 TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLR-----YSDSVGRVSFPSLVCFLM 141
Query: 62 R 62
R
Sbjct: 142 R 142
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM
barrel domain, hydrolase, calcium binding, phospholipid
binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Length = 816
Score = 24.1 bits (51), Expect = 6.1
Identities = 7/59 (11%), Positives = 15/59 (25%), Gaps = 1/59 (1%)
Query: 1 MYDLDNDD-AISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCK 58
+ ++ + I + L + + D + FD F K
Sbjct: 162 LTTVEMEKNKIPVKAIQKCLSKDKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFK 220
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP:
c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Length = 372
Score = 23.8 bits (52), Expect = 7.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 24 GANISEEQLTSIAERTIL 41
G+NIS QL ++ E+ +
Sbjct: 341 GSNISLAQLRALKEQLGM 358
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer,
regulation, pyridoxal PHOS isoleucine biosynthesis; HET:
PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2
d.58.18.2
Length = 514
Score = 23.7 bits (52), Expect = 7.9
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 18/61 (29%)
Query: 24 GANISEEQLTSIAERTILEA-----------DQNGDQMISFDEFCKALER---TDVEQKM 69
GAN++ L ++ER L ++ G SF +FC+ L T+ +
Sbjct: 316 GANVNFHGLRYVSERCELGEQREALLAVTIPEEKG----SFLKFCQLLGGRSVTEFNYRF 371
Query: 70 S 70
+
Sbjct: 372 A 372
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG
structure initiative; 2.35A {Corynebacterium glutamicum
atcc 13032} SCOP: c.56.8.1
Length = 319
Score = 23.6 bits (50), Expect = 8.5
Identities = 10/61 (16%), Positives = 21/61 (34%)
Query: 2 YDLDNDDAISRDELLAVLHMMVGANISEEQLTSIAERTILEADQNGDQMISFDEFCKALE 61
Y + + +LL + N+ L AE+ + + ++ ALE
Sbjct: 204 YVSASPYPAATLKLLQSIADSADLNLPLLALERDAEKVHRQLMEQTEESSEIQRVVGALE 263
Query: 62 R 62
+
Sbjct: 264 Q 264
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.132 0.350
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,108,891
Number of extensions: 53536
Number of successful extensions: 709
Number of sequences better than 10.0: 1
Number of HSP's gapped: 450
Number of HSP's successfully gapped: 296
Length of query: 75
Length of database: 6,701,793
Length adjustment: 44
Effective length of query: 31
Effective length of database: 5,473,269
Effective search space: 169671339
Effective search space used: 169671339
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (23.3 bits)