RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy17267
(465 letters)
>2zpt_X Tyrosine-ester sulfotransferase; SULT1D1, catecholamine,
sulfonation; HET: A3P GOL; 1.15A {Mus musculus} PDB:
2zvp_X* 2zvq_X* 2zyt_X* 2zyu_X* 2zyv_X* 2zyw_X*
Length = 295
Score = 185 bits (472), Expect = 1e-55
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 40 ERYLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPL 99
E ++ +F RPDD+ + T+P+SGTTW E++ LI N + E+ + +
Sbjct: 16 EGIPLFWSIAEHWSQVESFEARPDDILISTYPKSGTTWVSEILDLIYNNGDAEKCKRDAI 75
Query: 100 TERFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIP 159
+R PF+E + E L R +KTH+P
Sbjct: 76 YKRVPFMELIIPGIT-------------------------NGVEMLNNMPSPRIVKTHLP 110
Query: 160 LSLLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
+ LLP + K+IYVARN KDV VSY+ Y++ + G ++ F F
Sbjct: 111 VQLLPSSFWKNDCKIIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAG 165
Score = 166 bits (422), Expect = 4e-48
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
IIYVARN KDV VSY+ Y++ + G ++ F F V + P+++HVK W R
Sbjct: 125 IIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAGQVSFGPWYDHVKSWWEKRK 184
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
+L+LFYEDM +N + + +
Sbjct: 185 EYRILYLFYEDMKEN---------------PKCEIQK-----------------IL---- 208
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
+FL + ++ + ++ + + NPS N+ +++ + + S F+R+G SG WK+
Sbjct: 209 -KFLEKDIPEEILNKILYHSSFSVMKENPSANYTTMMKEEMDHSVSP-FMRKGISGDWKN 266
Query: 439 KFSSELNMQADKWIEENLRNTDIRFP 464
+F+ + ++ + + ++ ++F
Sbjct: 267 QFTVAQYEKFEEDYVKKMEDSTLKFR 292
>1zd1_A Sulfotransferase 4A1; SGC, SULT4A1, structural genomics, structural
genomics conso transferase; 2.24A {Homo sapiens}
Length = 284
Score = 179 bits (456), Expect = 3e-53
Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 29/173 (16%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
P E+I NFPVRP DVW+VT+P+SGT+ QE+V+L++ G + +E + E
Sbjct: 25 VRLPPFCRGKMEEIANFPVRPSDVWIVTYPKSGTSLLQEVVYLVSQGADPDEIGLMNIDE 84
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
+ P LE+ P + ++E T R IK+H+P
Sbjct: 85 QLPVLEYPQ-----------------------------PGLDIIKELTSPRLIKSHLPYR 115
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
LP DL +KVIY+ARNPKD+ VSY+ ++ RT+ + G F F F ND
Sbjct: 116 FLPSDLHNGDSKVIYMARNPKDLVVSYYQFHRSLRTMSYRGTFQEFCRRFMND 168
Score = 153 bits (389), Expect = 2e-43
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 52/206 (25%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+IY+ARNPKD+ VSY+ ++ RT+ + G F F F ND +G+ ++ HV+E W HR
Sbjct: 128 VIYMARNPKDLVVSYYQFHRSLRTMSYRGTFQEFCRRFMNDKLGYGSWFEHVQEFWEHRM 187
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
+ NVLFL YEDM+++ ++ + LA
Sbjct: 188 DSNVLFLKYEDMHRD----------------LVTMVEQ----------------LA---- 211
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
FL + Q+E L + + + N + L + +G+ G WK
Sbjct: 212 -RFLGVSCDKAQLEALTEHC---HQLVDQCCNAEAL------------PVGRGRVGLWKD 255
Query: 439 KFSSELNMQADKWIEENLRNTDIRFP 464
F+ +N + D ++ + D+ F
Sbjct: 256 IFTVSMNEKFDLVYKQKMGKCDLTFD 281
>1fmj_A Retinol dehydratase; sulfotransferase, adenosine 3',5'-
diphosphate; HET: A3P RTL; 2.00A {Spodoptera frugiperda}
SCOP: c.37.1.5 PDB: 1fml_A* 1x8l_A* 1x8k_A* 1x8j_A*
Length = 351
Score = 178 bits (453), Expect = 3e-52
Identities = 76/217 (35%), Positives = 127/217 (58%), Gaps = 11/217 (5%)
Query: 6 TKFPYKVSPLDPKQNAQLRQHFKGESSHFVQVGPERYLFPSKYESDAEKIYNFPVRPDDV 65
FPY+ L+P+++ ++ + + +V++GP+ Y+ Y DA IYN P+RP DV
Sbjct: 7 LPFPYEFRELNPEEDKLVKANLGAFPTTYVKLGPKGYMVYRPYLKDAANIYNMPLRPTDV 66
Query: 66 WVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVRLAEFRAENS 125
+V ++ RSGTT TQELVWLI N LN+E A+ T ++ R+ +L+ + D + E+ +
Sbjct: 67 FVASYQRSGTTMTQELVWLIENDLNFEAAK-TYMSLRYIYLDGFMIYDPEKQEEYN-DIL 124
Query: 126 GNLEHQEIIDSIATPQY--------EQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIYV 177
N E+ ++ + +Y T +RF+KTH+PLSL+PP+++ + K++Y+
Sbjct: 125 PNPENLDMERYLGLLEYSSRPGSSLLAAVPPTEKRFVKTHLPLSLMPPNMLDT-VKMVYL 183
Query: 178 ARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
AR+P+DVAVS F+ +L L+ +F FW F
Sbjct: 184 ARDPRDVAVSSFHHARLLYLLNKQSNFKDFWEMFHRG 220
Score = 169 bits (428), Expect = 1e-48
Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 38/207 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
++Y+AR+P+DVAVS F+ +L L+ +F FW F L PY+ HVKE W+ R
Sbjct: 180 MVYLARDPRDVAVSSFHHARLLYLLNKQSNFKDFWEMFHRGLYTLTPYFEHVKEAWAKRH 239
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
+PN+LFLFYED K+ + R +A
Sbjct: 240 DPNMLFLFYEDYLKD---------------LPGCIAR-----------------IA---- 263
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
+FL L+++QI++L +L+ + F+ N +VN + +G+ FIR+GK+G W+
Sbjct: 264 -DFLGKKLSEEQIQRLCEHLNFEKFKNNGAVNMEDYREIGILADGEH-FIRKGKAGCWRD 321
Query: 439 KFSSELNMQADKWIEENLRNTDIRFPE 465
F E+ QA+KWI++NL++TD+R+P
Sbjct: 322 YFDEEMTKQAEKWIKDNLKDTDLRYPN 348
>1j99_A Alcohol sulfotransferase; dehydroepiandosterone, DHEA; HET: AND;
1.99A {Homo sapiens} SCOP: c.37.1.5 PDB: 1ov4_A* 3f3y_A*
2qp3_A* 2qp4_A* 1efh_A*
Length = 293
Score = 174 bits (444), Expect = 2e-51
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 33/176 (18%)
Query: 42 YLFPS---KYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTP 98
FP+ + E+ + F +R +DV ++T+P+SGT W E++ L+ + + + ++ P
Sbjct: 19 IAFPTMGFRSETLRKVRDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVP 78
Query: 99 LTERFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHI 158
+ ER P++E + Y L E R +H+
Sbjct: 79 IWERSPWVESEIG------------------------------YTALSETESPRLFSSHL 108
Query: 159 PLSLLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
P+ L P +S AKVIY+ RNP+DV VS + +K + L ++ ++ +F
Sbjct: 109 PIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFLKKPKSWEEYFEWFCQG 164
Score = 161 bits (410), Expect = 2e-46
Identities = 37/205 (18%), Positives = 77/205 (37%), Gaps = 39/205 (19%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+IY+ RNP+DV VS + +K + L ++ ++ +F V + +++H+ R+
Sbjct: 124 VIYLMRNPRDVLVSGYFFWKNMKFLKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPMRE 183
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
N L L YE++ ++ + + +
Sbjct: 184 EKNFLLLSYEELKQD----------------TGRTIEK----------------IC---- 207
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
+FL L +++ + ++ + N N+ L V +R+G SG WK+
Sbjct: 208 -QFLGKTLEPEELNLILKNSSFQSMKENKMSNYSLLSVDYVV--DKTQLLRKGVSGDWKN 264
Query: 439 KFSSELNMQADKWIEENLRNTDIRF 463
F+ DK +E + +
Sbjct: 265 HFTVAQAEDFDKLFQEKMADLPREL 289
>3bfx_A Sulfotransferase 1C2; PAP, structural genomics, PSI, protein
structure initiative, structural genomics consortium,
SGC, alternative splicing; HET: A3P; 1.80A {Homo
sapiens} SCOP: c.37.1.5
Length = 296
Score = 174 bits (442), Expect = 5e-51
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
L + +I +F +PDD+ + T+P++GTTW QE+V +I + E+ + +
Sbjct: 19 TLLQPATVDNWSQIQSFEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEKCQRAIIQH 78
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
R PF+E+ E+ + R +KTH+
Sbjct: 79 RHPFIEWARPPQ-------------------------PSGVEKAKAMPSPRILKTHLSTQ 113
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
LLPP + K +YVARN KD VSY++ ++ L G ++ ++ F N
Sbjct: 114 LLPPSFWENNCKFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFING 166
Score = 169 bits (430), Expect = 2e-49
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 38/206 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+YVARN KD VSY++ ++ L G ++ ++ F N V W +++HVK W +D
Sbjct: 126 FLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFINGKVVWGSWFDHVKGWWEMKD 185
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
+LFLFYED+ ++ +R+ +
Sbjct: 186 RHQILFLFYEDIKRD----------------PKHEIRK----------------VM---- 209
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
+F+ + + ++++ + + NP N + + + F+R+G G WK+
Sbjct: 210 -QFMGKKVDETVLDKIVQETSFEKMKENPMTNRSTVSK-SILDQSISSFMRKGTVGDWKN 267
Query: 439 KFSSELNMQADKWIEENLRNTDIRFP 464
F+ N + D+ + T I F
Sbjct: 268 HFTVAQNERFDEIYRRKMEGTSINFS 293
>1aqu_A EST, estrogen sulfotransferase; PAP, sulfonation, 17-beta
estradiol, steroid-binding; HET: A3P EST; 1.60A {Mus
musculus} SCOP: c.37.1.5 PDB: 1aqy_A* 1bo6_A* 1hy3_A*
1g3m_A*
Length = 297
Score = 173 bits (440), Expect = 7e-51
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
L ++ E + F RPDD+ + T+P+SGTTW E+V++I + E+ + +
Sbjct: 20 VLMDKRFTKYWEDVEMFLARPDDLVIATYPKSGTTWISEVVYMIYKEGDVEKCKEDAIFN 79
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
R P+LE +QL+E R +KTH+P
Sbjct: 80 RIPYLECRNE-------------------------DLINGIKQLKEKESPRIVKTHLPPK 114
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
LLP K+IY+ RN KDVAVSY+ + + F F F
Sbjct: 115 LLPASFWEKNCKMIYLCRNAKDVAVSYYYFLLMITSYPNPKSFSEFVEKFMQG 167
Score = 165 bits (420), Expect = 7e-48
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 38/206 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+IY+ RN KDVAVSY+ + + F F F V + +++HVK W
Sbjct: 127 MIYLCRNAKDVAVSYYYFLLMITSYPNPKSFSEFVEKFMQGQVPYGSWYDHVKAWWEKSK 186
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
N VLF+FYEDM ++ + + L
Sbjct: 187 NSRVLFMFYEDMKED----------------IRREVVK----------------LI---- 210
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
EFL + + ++++ + + + NPS N+ + + + F+R+G G WK+
Sbjct: 211 -EFLERKPSAELVDRIIQHTSFQEMKNNPSTNYTMMPE-EMMNQKVSPFMRKGIIGDWKN 268
Query: 439 KFSSELNMQADKWIEENLRNTDIRFP 464
F L + D+ ++ +++ ++F
Sbjct: 269 HFPEALRERFDEHYKQQMKDCTVKFR 294
>1ls6_A ARYL sulfotransferase; SULT 1A1, PAP, P-nitrophenol, positive
cooperativity, two substrate binding sites; HET: A3P
NPO; 1.90A {Homo sapiens} SCOP: c.37.1.5 PDB: 2d06_A*
3u3o_A* 3u3k_A* 3u3m_A* 3u3j_A* 3u3r_A* 1z28_A* 3qvv_A*
3qvu_A* 1z29_A* 1cjm_A 2a3r_A*
Length = 295
Score = 171 bits (436), Expect = 3e-50
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
+ + +F RPDD+ + T+P+SGTTW +++ +I G + E+ P+
Sbjct: 18 VPLIKYFAEALGPLQSFQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFM 77
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
R PFLEF E L++ R +KTH+PL+
Sbjct: 78 RVPFLEFKAPGIPSG-------------------------METLKDTPAPRLLKTHLPLA 112
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
LLP L+ KV+YVARN KDVAVSY++ Y + + G +D+F F
Sbjct: 113 LLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPGTWDSFLEKFMVG 165
Score = 164 bits (417), Expect = 2e-47
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 38/206 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
++YVARN KDVAVSY++ Y + + G +D+F F V + ++ HV+E W
Sbjct: 125 VVYVARNAKDVAVSYYHFYHMAKVHPEPGTWDSFLEKFMVGEVSYGSWYQHVQEWWELSR 184
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
VL+LFYEDM +N +++ +
Sbjct: 185 THPVLYLFYEDMKEN----------------PKREIQK----------------IL---- 208
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
EF+ L ++ ++ + + K + NP N+ + F+R+G +G WK+
Sbjct: 209 -EFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYTTV-PQEFMDHSISPFMRKGMAGDWKT 266
Query: 439 KFSSELNMQADKWIEENLRNTDIRFP 464
F+ N + D E + + F
Sbjct: 267 TFTVAQNERFDADYAEKMAGCSLSFR 292
>3ckl_A Sulfotransferase family cytosolic 1B member 1; SULT1B1, human
cytosolic sulfotransferase, resveratrol, SGC, cytoplasm,
lipid metabolism; HET: STL A3P; 2.00A {Homo sapiens}
PDB: 2z5f_A*
Length = 298
Score = 171 bits (436), Expect = 4e-50
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 24/173 (13%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
Y + S+ EKI F RPDD+ + T+P+SGTTW E++ +I N + E+ + +TE
Sbjct: 20 YPMTCAFASNWEKIEQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFITE 79
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
+ P LE + + T EQL + R +KTH+P
Sbjct: 80 KVPMLEMTLP------------------------GLRTSGIEQLEKNPSPRIVKTHLPTD 115
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
LLP + K+IY+ARN KDV+VSY++ + F G ++ + F
Sbjct: 116 LLPKSFWENNCKMIYLARNAKDVSVSYYHFDLMNNLQPFPGTWEEYLEKFLTG 168
Score = 161 bits (409), Expect = 2e-46
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 38/206 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+IY+ARN KDV+VSY++ + F G ++ + F V + ++ HVK W ++
Sbjct: 128 MIYLARNAKDVSVSYYHFDLMNNLQPFPGTWEEYLEKFLTGKVAYGSWFTHVKNWWKKKE 187
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
+LFL+YEDM +N +++ +
Sbjct: 188 EHPILFLYYEDMKEN----------------PKEEIKK----------------II---- 211
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
FL L + ++++ + + + NP VN+ L V F+R+G +G WK+
Sbjct: 212 -RFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTHL-PTTVMDHSKSPFMRKGTAGDWKN 269
Query: 439 KFSSELNMQADKWIEENLRNTDIRFP 464
F+ N + D E + T ++F
Sbjct: 270 YFTVAQNEKFDAIYETEMSKTALQFR 295
>2reo_A Putative sulfotransferase 1C3; sulfate conjugation, PAP, structural
genom consortium, SGC; HET: A3P; 2.65A {Homo sapiens}
PDB: 2h8k_A*
Length = 305
Score = 170 bits (432), Expect = 2e-49
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
+ EK+ NF +PDD+ + T+P+SGTTW E++ +I N + E+ + +
Sbjct: 27 VPTLILSKEWWEKVANFQAKPDDLILATYPKSGTTWMHEILDMILNDGDVEKCKRAQTLD 86
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
R FLE P E + E + + IKTH+P
Sbjct: 87 RHAFLELKFPHKEK------------------------PDLEFVLEMSSPQLIKTHLPSH 122
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
L+PP + K++YVARNPKD VSY++ +++ + + + F+ F +
Sbjct: 123 LIPPSIWKENCKIVYVARNPKDCLVSYYHFHRMASFMPDPQNLEEFYEKFMSG 175
Score = 166 bits (423), Expect = 3e-48
Identities = 45/206 (21%), Positives = 91/206 (44%), Gaps = 38/206 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
I+YVARNPKD VSY++ +++ + + + F+ F + V +++HVK W+ +D
Sbjct: 135 IVYVARNPKDCLVSYYHFHRMASFMPDPQNLEEFYEKFMSGKVVGGSWFDHVKGWWAAKD 194
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
+L+LFYED+ K+ + + +
Sbjct: 195 MHRILYLFYEDIKKD---------------PKREIEK-----------------IL---- 218
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
+FL ++++ + ++ + + NP N+ L + + S F+R+G G WK+
Sbjct: 219 -KFLEKDISEEILNKIIYHTSFDVMKQNPMTNYTTLPTSIMDHSISP-FMRKGMPGDWKN 276
Query: 439 KFSSELNMQADKWIEENLRNTDIRFP 464
F+ N + DK ++ + + + F
Sbjct: 277 YFTVAQNEEFDKDYQKKMAGSTLTFR 302
>2gwh_A Sulfotransferase 1C2; sulfate conjugation, pentachlorophenol, PA
pesticide, structural genomics, structural genomics
consort transferase; HET: A3P PCI; 1.80A {Homo sapiens}
PDB: 2ad1_A*
Length = 298
Score = 169 bits (429), Expect = 3e-49
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 25 QHFKGESSHFVQVGPER-YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVW 83
+ F + + + V + L P+ +KI+NF +PDD+ + T+P++GTTWTQE+V
Sbjct: 3 EDFTFDGTKRLSVNYVKGILQPTDTCDIWDKIWNFQAKPDDLLISTYPKAGTTWTQEIVE 62
Query: 84 LIANGLNYEEARTTPLTERFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYE 143
LI N + E+++ P +RFPFLE + E
Sbjct: 63 LIQNEGDVEKSKRAPTHQRFPFLEMKIPSLG-------------------------SGLE 97
Query: 144 QLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGD 203
Q R +KTH+P LLPP L+ K+IYVARNPKD VSY++ ++ + L G
Sbjct: 98 QAHAMPSPRILKTHLPFHLLPPSLLEKNCKIIYVARNPKDNMVSYYHFQRMNKALPAPGT 157
Query: 204 FDTFWNYFQND 214
++ ++ F
Sbjct: 158 WEEYFETFLAG 168
Score = 168 bits (426), Expect = 8e-49
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 38/206 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
IIYVARNPKD VSY++ ++ + L G ++ ++ F V W + HVK W +D
Sbjct: 128 IIYVARNPKDNMVSYYHFQRMNKALPAPGTWEEYFETFLAGKVCWGSWHEHVKGWWEAKD 187
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
+L+LFYEDM KN + + LA
Sbjct: 188 KHRILYLFYEDMKKN---------------PKHEIQK-----------------LA---- 211
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
EF+ L ++++ Y + NP N+ + + F+R+G G WK
Sbjct: 212 -EFIGKKLDDKVLDKIVHYTSFDVMKQNPMANYSSI-PAEIMDHSISPFMRKGAVGDWKK 269
Query: 439 KFSSELNMQADKWIEENLRNTDIRFP 464
F+ N + D+ ++ + +T + F
Sbjct: 270 HFTVAQNERFDEDYKKKMTDTRLTFH 295
>1q20_A SULT2B1B, sulfotransferase family, cytosolic, 2B, member 1 isoform
B; pregnenolone, cholesterol, PAP; HET: A3P PLO; 2.30A
{Homo sapiens} SCOP: c.37.1.5 PDB: 1q1z_A* 1q22_A*
Length = 299
Score = 164 bits (418), Expect = 1e-47
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 42 YLFPSKY---ESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTP 98
FP ES + VR DD++++T+P+SGTTW E++ LI + R+ P
Sbjct: 24 VPFPVGLYSLESISLAENTQDVRDDDIFIITYPKSGTTWMIEIICLILKEGDPSWIRSVP 83
Query: 99 LTERFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHI 158
+ ER P+ E L + R + +H+
Sbjct: 84 IWERAPWCETI------------------------------VGAFSLPDQYSPRLMSSHL 113
Query: 159 PLSLLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
P+ + +S AKVIY+ RNP+DV VS ++ K+ L G D F F
Sbjct: 114 PIQIFTKAFFSSKAKVIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKG 169
Score = 158 bits (402), Expect = 3e-45
Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 38/202 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+IY+ RNP+DV VS ++ K+ L G D F F V + +++H+K +
Sbjct: 129 VIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLRMKG 188
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
N LF+ YE++ ++ + R +
Sbjct: 189 KDNFLFITYEELQQD----------------LQGSVER----------------IC---- 212
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
FL PL ++ + + A+ +AN N+ L + + F+R+G G WK+
Sbjct: 213 -GFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLLPPSLLDHRRGA-FLRKGVCGDWKN 270
Query: 439 KFSSELNMQADKWIEENLRNTD 460
F+ + D+ + +R
Sbjct: 271 HFTVAQSEAFDRAYRKQMRGMP 292
>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform
A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens}
SCOP: c.37.1.5
Length = 350
Score = 165 bits (420), Expect = 2e-47
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 42 YLFPSKY---ESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTP 98
FP ES + VR DD++++T+P+SGTTW E++ LI + R+ P
Sbjct: 22 VPFPVGLYSLESISLAENTQDVRDDDIFIITYPKSGTTWMIEIICLILKEGDPSWIRSVP 81
Query: 99 LTERFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHI 158
+ ER P+ E L + R + +H+
Sbjct: 82 IWERAPWCETI------------------------------VGAFSLPDQYSPRLMSSHL 111
Query: 159 PLSLLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
P+ + +S AKVIY+ RNP+DV VS ++ K+ L G D F F
Sbjct: 112 PIQIFTKAFFSSKAKVIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKG 167
Score = 159 bits (403), Expect = 8e-45
Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 38/202 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+IY+ RNP+DV VS ++ K+ L G D F F V + +++H+K +
Sbjct: 127 VIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLRMKG 186
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
N LF+ YE++ ++ + R +
Sbjct: 187 KDNFLFITYEELQQD----------------LQGSVER----------------IC---- 210
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
FL PL ++ + + A+ +AN N+ L + + F+R+G G WK+
Sbjct: 211 -GFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLLPPSLLDHRRGA-FLRKGVCGDWKN 268
Query: 439 KFSSELNMQADKWIEENLRNTD 460
F+ + D+ + +R
Sbjct: 269 HFTVAQSEAFDRAYRKQMRGMP 290
>1q44_A RARO47, steroid sulfotransferase, AT2G03760/; APO, structu
genomics, protein structure initiative, center for
eukaryot structural genomics; 1.90A {Arabidopsis
thaliana} SCOP: c.37.1.5 PDB: 2q3m_A
Length = 326
Score = 152 bits (385), Expect = 2e-42
Identities = 37/177 (20%), Positives = 58/177 (32%), Gaps = 26/177 (14%)
Query: 42 YLFPSKY-ESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEART--TP 98
+ F + D+ +VT P+SGTTW + LV+ + N + + + P
Sbjct: 44 LWHTQAILQGILICQKRFEAKDSDIILVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHP 103
Query: 99 LTERFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHI 158
L P L LE R + THI
Sbjct: 104 LLVTNPHLLV-----------------PFLEGV-----YYESPDFDFSSLPSPRLMNTHI 141
Query: 159 PLSLLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDF-TGDFDTFWNYFQND 214
LP + +S K++Y RNPKD+ VS ++ K + + F
Sbjct: 142 SHLSLPESVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPEETADYPIEKAVEAFCEG 198
Score = 138 bits (349), Expect = 2e-37
Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 45/210 (21%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDF-TGDFDTFWNYFQNDLVGWAPYWNHVKEGW--S 315
I+Y RNPKD+ VS ++ K + + F P+W+H+ E W S
Sbjct: 157 IVYCCRNPKDMFVSLWHFGKKLAPEETADYPIEKAVEAFCEGKFIGGPFWDHILEYWYAS 216
Query: 316 HRDNPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAA 375
+ VLF+ YE++ K + R +A
Sbjct: 217 RENPNKVLFVTYEELKKQ---------------TEVEMKR-----------------IA- 243
Query: 376 LRSFEFL-STPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSG 434
EFL + ++++ ++ ++ +L ++ F R+G+ G
Sbjct: 244 ----EFLECGFIEEEEVREIVKLCSFESLSNLEVNKEGKLPN----GIETKTFFRKGEIG 295
Query: 435 GWKSKFSSELNMQADKWIEENLRNTDIRFP 464
GW+ S L + D+ IEE + + ++F
Sbjct: 296 GWRDTLSESLAEEIDRTIEEKFKGSGLKFS 325
>3mgb_A TEG12; sulfotransferase, glycopeptide, antibiotic, transferase-anti
complex; HET: GHP 3MY 3FG OMY PAP; 2.04A {Uncultured
soil bacterium} PDB: 3mgc_A* 3mg9_A* 3nib_A*
Length = 319
Score = 141 bits (358), Expect = 1e-38
Identities = 24/164 (14%), Positives = 51/164 (31%), Gaps = 33/164 (20%)
Query: 52 AEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVF 111
+ W+ ++P++G TW + ++ G + +
Sbjct: 26 GGQQMGRGSMNGIRWIASYPKAGNTWVRCMLAAYITG------KAPQVWNDIDAESLT-- 77
Query: 112 VDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMT-S 170
++++ E +KTH+ + L +
Sbjct: 78 ----------------------LEAMLRFGDLPPAEPMEPVLVKTHLKADVPVLGLYGEA 115
Query: 171 GAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
AKV+Y+ RNP+D+ +S + + R D F F +
Sbjct: 116 TAKVLYLVRNPRDMLLSSMRMASISR--DDVEKSRDFARKFIAN 157
Score = 123 bits (311), Expect = 5e-32
Identities = 36/228 (15%), Positives = 65/228 (28%), Gaps = 68/228 (29%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYF------------QNDLVGWAPY 306
++Y+ RNP+D+ +S + + R D F F VG +
Sbjct: 119 VLYLVRNPRDMLLSSMRMASISR--DDVEKSRDFARKFIANEGLGWNALGAGGGVGLGSW 176
Query: 307 WNHVKEGWSHRD----NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTT 362
+V+ N +VL + YED+ + A
Sbjct: 177 PENVRSWTESSSDRFPNADVLTMRYEDLKGD----------------PVARFSE------ 214
Query: 363 VFGGILSNCGLAALRSFEFL--STPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVC 420
+ EFL P+ + I + A ++ R + Q +
Sbjct: 215 ----------IV-----EFLDLGGPVDIEDIRRAVAASTLERMRELEKRSEQQGGGSPI- 258
Query: 421 RAQSDGFIRQGKSGGWKSKFSSELNMQA---------DKWIEENLRNT 459
D + +G GG + +F E + +E L
Sbjct: 259 -RHGDARMMKGGPGGARPQFVGEGRYDQSLSFLGEDIESDYQELLHGD 305
>2ov8_A STAL; sulfotransferase, structural genomics, montr kingston
bacterial structural genomics initiative, BSGI, UN
function; 2.58A {Streptomyces toyocaensis} PDB: 2ovb_A
2ovf_A*
Length = 288
Score = 136 bits (345), Expect = 5e-37
Identities = 23/161 (14%), Positives = 43/161 (26%), Gaps = 35/161 (21%)
Query: 57 NFPVRPDD--VWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDN 114
R W+ ++P++G W + ++ G E + P LE
Sbjct: 13 GLVPRGSHMMCWIASYPKAGGHWLRCMLTSYVTGEPVET--WPGIQAGVPHLEG------ 64
Query: 115 VRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMT-SGAK 173
+ + + + TH S AK
Sbjct: 65 ----------------------LLRDGEAPSADPDEQVLLATHFTADRPVLRFYRESTAK 102
Query: 174 VIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
V+ + RNP+D +S + + + F D
Sbjct: 103 VVCLIRNPRDAMLSLMRMKGI--PPEDVEACRKIAETFIAD 141
Score = 112 bits (281), Expect = 4e-28
Identities = 23/214 (10%), Positives = 53/214 (24%), Gaps = 55/214 (25%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND--------LVGWAPYWNHV 310
++ + RNP+D +S + + + F D G + ++
Sbjct: 103 VVCLIRNPRDAMLSLMRMKGI--PPEDVEACRKIAETFIADEGFSSVRIWAGEGSWPENI 160
Query: 311 KEGWSHR----DNPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGG 366
+ N VL + YED+ K+ L +
Sbjct: 161 RSWTDSVHESFPNAAVLAVRYEDLRKD-------------PE---GELWK---------- 194
Query: 367 ILSNCGLAALRSFEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDG 426
++ +FL D + A ++ R + + +
Sbjct: 195 VV-----------DFLELGGR-DGVADAVANCTLERMREMEERSKLLGLETTGLMTRGGK 242
Query: 427 ---FIRQGKSGGWKSKFSSELNMQADKWIEENLR 457
F+ +G ++ +
Sbjct: 243 QLPFVGKGGQRKSLKFMGDDIEKAYADLLHGETD 276
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 44.7 bits (105), Expect = 6e-05
Identities = 67/432 (15%), Positives = 119/432 (27%), Gaps = 158/432 (36%)
Query: 124 NSGNLEHQEIIDSIATP-----QYEQLRECTGRRFIKTHI-----------PLSLLPPDL 167
+ G+LEH + P QL+E +F K P + P +L
Sbjct: 12 SHGSLEH-----VLLVPTASFFIASQLQE----QFNKILPEPTEGFAADDEPTT--PAEL 60
Query: 168 MTSGAKVI-YVARNPKDVAVSYFN--LYKLFRTLDFTGDFDTFWNYFQ-NDLGKKMRSSV 223
+ K + YV+ + V F+ L +F+ Y + ND +
Sbjct: 61 V---GKFLGYVSSLVEPSKVGQFDQVLNLCLT------EFEN--CYLEGND--------I 101
Query: 224 PSVVVSTNSQPGDRRCWVQIPTRTEIYVRNFLLLEIIYVARN----PKD----------- 268
++ + + E+ ++N+ AR P D
Sbjct: 102 HALAAKLLQENDTT-----LVKTKEL-IKNY------ITARIMAKRPFDKKSNSALFRAV 149
Query: 269 -------VAV--------SYF----NLYKLFRTL--DFTGDFDTFWNYFQNDLVGWAPYW 307
VA+ YF +LY+ + L D + + +
Sbjct: 150 GEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVF 209
Query: 308 NHVK--EGWSHR--DNPNVLFLF----------------YE------DMNKNELLSCMAA 341
W + P+ +L Y EL S +
Sbjct: 210 TQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKG 269
Query: 342 IHAIHTRYATAVL-------RRYHMNTTVFGGILSNCGLAALRSFEFLSTP--LTQDQIE 392
TAV + ++ +L G+ ++ S P + +D +E
Sbjct: 270 ATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLE 329
Query: 393 QLAAYLDIKNFRANPSVNFDQL-IRVGVCRAQSDGFIRQGKSGGWKSKFSSELNMQADKW 451
N PS L I + + Q ++ K +S L A K
Sbjct: 330 ---------NNEGVPS---PMLSIS-NLTQEQVQDYVN---------KTNSHL--PAGKQ 365
Query: 452 IEENLRNTDIRF 463
+E +L N
Sbjct: 366 VEISLVNGAKNL 377
>1nst_A NST1, heparan sulfate N-deacetylase/N-sulfotransferase; PAP,
haparin sulfate, haparin sulfate biosynthesis,
glycoprotein; HET: A3P; 2.30A {Homo sapiens} SCOP:
c.37.1.5
Length = 325
Score = 43.7 bits (102), Expect = 7e-05
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 11/86 (12%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRT-----------LDFTGDFDTFWNYFQNDLVGWAPYW 307
++ + NP D A S++ + + D + QN + Y
Sbjct: 142 VLTILINPADRAYSWYQHQRAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYA 201
Query: 308 NHVKEGWSHRDNPNVLFLFYEDMNKN 333
H++ S +L L + +
Sbjct: 202 THIERWLSAYHANQILVLDGKLLRTE 227
Score = 37.2 bits (85), Expect = 0.009
Identities = 21/160 (13%), Positives = 43/160 (26%), Gaps = 17/160 (10%)
Query: 61 RPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVRLAEF 120
R + ++ ++GTT +L + ++ E F + + +
Sbjct: 46 RFPKLLIIGPQKTGTTALYL--FLGMHPDLSSNYPSSETFEEIQFFNGHNYHKGIDWYME 103
Query: 121 RAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIYVARN 180
N + + Y R + AKV+ + N
Sbjct: 104 FFPIPSNTTSDFYFE--KSANYFDSEVAPRRAA-------------ALLPKAKVLTILIN 148
Query: 181 PKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLGKKMR 220
P D A S++ + +D K+R
Sbjct: 149 PADRAYSWYQHQRAHDDPVALKYTFHEVITAGSDASSKLR 188
>2z6v_A Putative uncharacterized protein; sulfotransferase, unknown
function; HET: PLM; 2.60A {Mycobacterium avium}
Length = 414
Score = 41.4 bits (96), Expect = 4e-04
Identities = 10/75 (13%), Positives = 28/75 (37%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+I+ R+P S NL++L ++L + + + + +
Sbjct: 268 LIWAHRDPYKATGSLCNLWRLPQSLVMNTELLDQTEMGRLAMWQMRYHVDRPLRARERIG 327
Query: 319 NPNVLFLFYEDMNKN 333
+ ++Y +M ++
Sbjct: 328 DERFFHMYYHEMMRD 342
Score = 28.7 bits (63), Expect = 4.4
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 171 GAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDL 215
A++I+ R+P S NL++L ++L + + +
Sbjct: 265 DARLIWAHRDPYKATGSLCNLWRLPQSLVMNTELLDQTEMGRLAM 309
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 41.4 bits (96), Expect = 7e-04
Identities = 68/446 (15%), Positives = 127/446 (28%), Gaps = 140/446 (31%)
Query: 6 TKFPYKV---------SP---LDPKQN--AQLRQHFKGESSHFVQVGPERYLFPSKYESD 51
K +K+ SP L+ Q Q+ ++ S H + + S
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI-------KLRIHSI 230
Query: 52 AEKIYNFPVRP---------DDVW---------------------VVTFPRSGTTWTQEL 81
++ +V VT S T T
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 82 VWLIANGLNYEEARTTPLTERF----------------PFLEFNVFVDNVRLAEFRAENS 125
+ + L +E ++ L ++ P ++ +++R +N
Sbjct: 291 LDHHSMTLTPDEVKS--LLLKYLDCRPQDLPREVLTTNPRR-LSIIAESIRDGLATWDNW 347
Query: 126 GNL---EHQEIID-SIATPQYEQLRECTGRRFI---KTHIPLSLL-----------PPDL 167
++ + II+ S+ + + R+ R + HIP LL +
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV 407
Query: 168 MTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLGKKMRSSVPSVV 227
+ K V + PK+ +S ++Y L+ + + L + +
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIY-----LELKVKLEN-----EYALHRSIVDHY---- 453
Query: 228 VSTNSQPGDRRCWVQIPTRTEIYVRNFLLLEIIYVARNPKDVAVSYFNLYKLFRT--LDF 285
+ P IP + Y + I + +N + + LFR LDF
Sbjct: 454 ----NIPKTFDSDDLIPPYLDQYFYSH----IGHHLKN-----IEHPERMTLFRMVFLDF 500
Query: 286 TGDF--------DTFWN---YFQNDLVGWAPYWNHVKEGWSHRDNPNVLFLFYEDMNKNE 334
F T WN N L Y ++ DN +
Sbjct: 501 --RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI------CDNDPKYERLVNAILDF- 551
Query: 335 LLSCMAAIHAIHTRYATAVLRRYHMN 360
L + I ++Y T +LR M
Sbjct: 552 LPKI--EENLICSKY-TDLLRIALMA 574
Score = 41.0 bits (95), Expect = 7e-04
Identities = 65/490 (13%), Positives = 135/490 (27%), Gaps = 145/490 (29%)
Query: 40 ERYLFPS----KYESDAEKIYN----FP----VRPDDVWVVTFPRSGTTWTQEL---VWL 84
PS Y +++YN F R + EL +
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR------QALLELRPAKNV 153
Query: 85 IANG--------LNYEEARTTPLTERFPFLEFNVF---VDNVRLAEFRAENSGNLEHQ-- 131
+ +G + + + + + F +F + N E E L +Q
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDF---KIFWLNLKNCNSPETVLEMLQKLLYQID 210
Query: 132 ----EIIDSIATPQY--EQLRECTGRRFIKTHI-PLSLLPPDLMTSGAKVIYVARNPKDV 184
D + + ++ RR +K+ LL V N ++
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAEL-RRLLKSKPYENCLL-------------VLLNVQNA 256
Query: 185 -AVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLGKKMRSSVPSVVVSTNSQPGDRRC---- 239
A + FNL + L T + L + + S P + +
Sbjct: 257 KAWNAFNLS--CKILLTTRFKQVT-----DFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309
Query: 240 WVQIPT---RTEIYVRNFLLLEIIYVARNPKDVAV-----SYFNLYKLFRTLDFTGDF-- 289
++ E+ N L II A + +D + N KL ++ + +
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSII--AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE 367
Query: 290 -----DTFWNY--FQNDLVGWAPYWNHVKEGWSHRDNPNVLFLFYEDMNKNELLSCMAAI 342
F F P +L L + D+ K++ M +
Sbjct: 368 PAEYRKMFDRLSVFPPSA--HIP--------------TILLSLIWFDVIKSD---VMVVV 408
Query: 343 HAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRSFEFLSTPLTQDQIEQ--LAAYLDI 400
+ +H + V ++ +T I E + + + + Y
Sbjct: 409 NKLHKY--SLVEKQPKESTISIPSIY----------LELKVKLENEYALHRSIVDHYNIP 456
Query: 401 KNFRANPSVNFDQLIRVGVCRAQSDGFI--------RQGKSGGWKSKFSSE-LNMQADKW 451
K F ++ + D + + + + F L+ ++
Sbjct: 457 KTFDSD-----------DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF---RF 502
Query: 452 IEENLRNTDI 461
+E+ +R+
Sbjct: 503 LEQKIRHDST 512
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold,
transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A*
3ap3_A*
Length = 337
Score = 39.4 bits (92), Expect = 0.002
Identities = 36/214 (16%), Positives = 56/214 (26%), Gaps = 52/214 (24%)
Query: 20 NAQLRQHFKGESSHFVQVGPERYLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTW-- 77
+ R G PE+ + E Y + ++V PRSGTT
Sbjct: 12 SGVPRGSHMGAMR------PEQEELVMVGTNHVEYRYGKAMPL--IFVGGVPRSGTTLMR 63
Query: 78 -----------TQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVRLAEFRAENSG 126
+E I L +A + E+ E V D V A +A
Sbjct: 64 AMLDAHPEVRCGEETRI-IPRVLAMRQAWSKSGREKLRLDEAGVT-DEVLDAAMQAF--- 118
Query: 127 NLEHQEIIDSIATPQYEQLRECTGRRFI-KT-----HIPL--SLLPPDLMTSGAKVIYVA 178
E+I P R K L P +K + +
Sbjct: 119 ---ILEVIAKHGEPA---------RVLCNKDPFTLKSSVYLSRLFP------NSKFLLMV 160
Query: 179 RNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQ 212
R+ + S D + D + +
Sbjct: 161 RDGRASVHSMITRKVTIAGFDLSSYRDCLTKWNK 194
Score = 36.7 bits (85), Expect = 0.012
Identities = 8/72 (11%), Positives = 20/72 (27%), Gaps = 8/72 (11%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+ + R+ + S D + +++ L W +
Sbjct: 156 FLLMVRDGRASVHSMITRKVTIAGFDLS--------SYRDCLTKWNKAIEVMYAQCMEVG 207
Query: 319 NPNVLFLFYEDM 330
L ++YE +
Sbjct: 208 KEKCLPVYYEQL 219
>3uan_A Heparan sulfate glucosamine 3-O-sulfotransferase; alpha/beta motif,
CO-FACT PAPS/PAP, heparan sulfate oligosaccharides,
golgi-localized transferase; HET: A3P NGY BDP SGN IDS;
1.84A {Mus musculus} PDB: 1vkj_A* 1zrh_A*
Length = 269
Score = 37.8 bits (87), Expect = 0.004
Identities = 7/82 (8%), Positives = 26/82 (31%), Gaps = 7/82 (8%)
Query: 259 IIYVARNPKDVAVSYFN--LYKLFRTLDFTGDFDTFWNYFQNDLVGWAP-----YWNHVK 311
++ + R+P + +S + LY + + + + Y H+
Sbjct: 104 LLLILRDPSERVLSDYTQVLYNHLQKHKPYPPIEDLLMRDGRLNLDYKALNRSLYHAHML 163
Query: 312 EGWSHRDNPNVLFLFYEDMNKN 333
++ + + + ++
Sbjct: 164 NWLRFFPLGHIHIVDGDRLIRD 185
Score = 27.8 bits (61), Expect = 7.8
Identities = 20/151 (13%), Positives = 42/151 (27%), Gaps = 25/151 (16%)
Query: 64 DVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVRLAEFRAE 123
++ + GT E L + E F + L + +
Sbjct: 18 QTIIIGVRKGGTRALLE--MLSLHPDVA-----AAENEVHFFDWEEHYSQ--GLGWYLTQ 68
Query: 124 NSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIYVARNPKD 183
+ HQ ++ TP Y + R M +++ + R+P +
Sbjct: 69 MPFSSPHQLTVE--KTPAYFTSPKVPER-------------IHSMNPTIRLLLILRDPSE 113
Query: 184 VAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
+S + L+ L + + D
Sbjct: 114 RVLSDY-TQVLYNHLQKHKPYPPIEDLLMRD 143
>3rnl_A Sulfotransferase; structural genomics, PSI-biology, midwest center
for structu genomics, MCSG, alpha-beta-alpha sandwich;
HET: MSE; 1.75A {Alicyclobacillus acidocaldarius subsp}
Length = 311
Score = 37.5 bits (86), Expect = 0.007
Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 8/83 (9%)
Query: 259 IIYVARNPKDVAVSY--FNLYKLFRTLDFTGDFDTFWNYF------QNDLVGWAPYWNHV 310
I+ + RNP D A S + TL F Y V
Sbjct: 112 ILIMLRNPVDRAFSAYMHLVRDERETLSFRESLAKEEERIRQHYEPLWYYRAVGLYAAQV 171
Query: 311 KEGWSHRDNPNVLFLFYEDMNKN 333
K V + +E+ ++
Sbjct: 172 KRYLDVFGREQVKVILFEEFARD 194
>1t8t_A Heparan sulfate D-glucosaminyl 3-O- sulfotransferase 3A1;
alpha-beta motif, substrate-binding cleft; HET: A3P CIT;
1.85A {Homo sapiens} SCOP: c.37.1.5 PDB: 1t8u_A*
Length = 271
Score = 35.9 bits (82), Expect = 0.019
Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 8/82 (9%)
Query: 259 IIYVARNPKDVAVSYFNLYK-------LFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVK 311
+I V R+P A+S + F +L F + + + Y H++
Sbjct: 103 LIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTAGLIDTSWSAI-QIGIYAKHLE 161
Query: 312 EGWSHRDNPNVLFLFYEDMNKN 333
H +LF+ E + +
Sbjct: 162 HWLRHFPIRQMLFVSGERLISD 183
Score = 28.6 bits (63), Expect = 4.3
Identities = 25/153 (16%), Positives = 40/153 (26%), Gaps = 32/153 (20%)
Query: 64 DVWVVTFPRSGTTWTQELVWLIAN---GLNYEEARTTPLTERFPFLEFNVFVDNVRLAEF 120
++ + GT E +L + E + + + +
Sbjct: 19 QAIIIGVKKGGTRALLE--FLRVHPDVRAVGAEPHFFDRSYDKGLAWYRDLMPRTLDGQI 76
Query: 121 RAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIYVARN 180
E TP Y RE R M+ K+I V R+
Sbjct: 77 TME--------------KTPSYFVTREAPARIS-------------AMSKDTKLIVVVRD 109
Query: 181 PKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQN 213
P A+S + R T + TF N
Sbjct: 110 PVTRAISDYTQTLSKRPDIPTFESLTFKNRTAG 142
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics,
riken structur genomics/proteomics initiative, RSGI,
NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Length = 311
Score = 29.8 bits (68), Expect = 1.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 171 GAKVIYVARNPKDVAVSYFNLYKLFRTLDF 200
G +V+Y AR PK + + +L +L + D
Sbjct: 167 GMRVVYHARTPKPLPYPFLSLEELLKEADV 196
Score = 28.3 bits (64), Expect = 5.7
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 258 EIIYVARNPKDVAVSYFNLYKLFRTLDF 285
++Y AR PK + + +L +L + D
Sbjct: 169 RVVYHARTPKPLPYPFLSLEELLKEADV 196
>3bd9_A Heparan sulfate glucosamine 3-O-sulfotransferase 5; heparan sulfate
biosynthesis, substrate specificity, glycoprotein, golgi
apparatus, membrane; HET: A3P; 2.30A {Homo sapiens}
Length = 280
Score = 29.8 bits (66), Expect = 1.6
Identities = 10/84 (11%), Positives = 22/84 (26%), Gaps = 9/84 (10%)
Query: 259 IIYVARNPKDVAVSYFN--LYKLFRTLDFTGDFDTFWNYFQNDLVGWAP-------YWNH 309
++ + R P A+S + L R F+ V Y H
Sbjct: 112 LLIIVREPTTRAISDYTQVLEGKERKNKTYYKFEKLAIDPNTCEVNTKYKAVRTSIYTKH 171
Query: 310 VKEGWSHRDNPNVLFLFYEDMNKN 333
++ + + + +
Sbjct: 172 LERWLKYFPIEQFHVVDGDRLITE 195
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus
norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A
1aux_A*
Length = 309
Score = 28.2 bits (62), Expect = 5.1
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 407 PSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKSKFSS 442
P ++ IRV ++R SG WK+ S
Sbjct: 195 PFIDAKYDIRVQKIGNNYKAYMRTSISGNWKTNTGS 230
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural
genomics, joint center for structural genomics; HET:
MSE; 1.90A {Geobacter metallireducens}
Length = 142
Score = 27.7 bits (62), Expect = 5.4
Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 11/62 (17%)
Query: 373 LAALRSFEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGF--IRQ 430
LR + F ++ LT +Q++ +A + K+F + + +++D + +
Sbjct: 5 PERLRVYRFFAS-LTDEQLKDIALISEEKSFPTG-----SVIFKEN---SKADNLMLLLE 55
Query: 431 GK 432
G
Sbjct: 56 GG 57
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia,
vesicle T structural genomics, structural genomics
consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo
sapiens}
Length = 344
Score = 28.2 bits (62), Expect = 5.6
Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 387 TQDQIEQLAAYLDIKN--FRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKSKFSS 442
Q + + + + + ++ IR+ + ++R SG WK+ S
Sbjct: 190 NQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGS 247
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG,
midwest center for structural genomics, transporter;
HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB:
4ey3_A* 3t0n_A* 4eyk_A*
Length = 368
Score = 27.7 bits (62), Expect = 8.1
Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 9/55 (16%)
Query: 363 VFGGILSNCGLAALRSFE-----FLSTPLTQDQIEQLAAYLDIKNFRANPSVNFD 412
+ G ++ LAA + I + + Y+ R + ++
Sbjct: 76 IAGFGITPAALAAAPLATQAKVPEIVMAAGTSIITERSPYI----VRTSFTLAQS 126
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer,
oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4
PDB: 1ulj_B* 3en1_B* 3eqq_B
Length = 187
Score = 27.3 bits (60), Expect = 8.2
Identities = 7/56 (12%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Query: 276 LYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYW--NHVKEGWSHRDNPNVLFLFYED 329
Y + L+ F +++ D+ + P ++E F ++
Sbjct: 30 YYWEAKLLN-DRRFQEWFDLLAEDIHYFMPIRTTRIMRETAQEYSGAREYAHFDDN 84
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.137 0.430
Gapped
Lambda K H
0.267 0.0724 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,476,574
Number of extensions: 451680
Number of successful extensions: 1125
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1069
Number of HSP's successfully gapped: 79
Length of query: 465
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 368
Effective length of database: 3,993,456
Effective search space: 1469591808
Effective search space used: 1469591808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (26.5 bits)