RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17267
(465 letters)
>d1fmja_ c.37.1.5 (A:) Retinol dehydratase {Fall armyworm
(Spodoptera frugiperda) [TaxId: 7108]}
Length = 342
Score = 137 bits (345), Expect = 2e-37
Identities = 78/213 (36%), Positives = 125/213 (58%), Gaps = 9/213 (4%)
Query: 8 FPYKVSPLDPKQNAQLRQHFKGESSHFVQVGPERYLFPSKYESDAEKIYNFPVRPDDVWV 67
FPY+ L+P+++ ++ + + +V++GP+ Y+ Y DA IYN P+RP DV+V
Sbjct: 2 FPYEFRELNPEEDKLVKANLGAFPTTYVKLGPKGYMVYRPYLKDAANIYNMPLRPTDVFV 61
Query: 68 VTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVRLAEF-----RA 122
++ RSGTT TQELVWLI N LN+E A+ T ++ R+ +L+ + D + E+
Sbjct: 62 ASYQRSGTTMTQELVWLIENDLNFEAAK-TYMSLRYIYLDGFMIYDPEKQEEYNDILPNP 120
Query: 123 ENSGNLEHQEIIDSIATPQYEQLREC--TGRRFIKTHIPLSLLPPDLMTSGAKVIYVARN 180
EN + +++ + P L T +RF+KTH+PLSL+PP+ M K++Y+AR+
Sbjct: 121 ENLDMERYLGLLEYSSRPGSSLLAAVPPTEKRFVKTHLPLSLMPPN-MLDTVKMVYLARD 179
Query: 181 PKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQN 213
P+DVAVS F+ +L L+ +F FW F
Sbjct: 180 PRDVAVSSFHHARLLYLLNKQSNFKDFWEMFHR 212
Score = 84.3 bits (207), Expect = 2e-18
Identities = 84/305 (27%), Positives = 138/305 (45%), Gaps = 40/305 (13%)
Query: 160 LSLLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLGKKM 219
+ L+ DL AK R ++ K D + + + LG
Sbjct: 76 VWLIENDLNFEAAKTYMSLRYIYLDGFMIYDPEKQEEYNDILPNPENL--DMERYLGLLE 133
Query: 220 RSSVPSVVVSTNSQPGDRRCWVQIPTRTEIYVRNFLLLEIIYVARNPKDVAVSYFNLYKL 279
SS P + P ++R + + ++++Y+AR+P+DVAVS F+ +L
Sbjct: 134 YSSRPGSSLLAAVPPTEKRFVKTHLPLSLMPPNMLDTVKMVYLARDPRDVAVSSFHHARL 193
Query: 280 FRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRDNPNVLFLFYEDMNKNELLSCM 339
L+ +F FW F L PY+ HVKE W+ R +PN+LFLFYED K+
Sbjct: 194 LYLLNKQSNFKDFWEMFHRGLYTLTPYFEHVKEAWAKRHDPNMLFLFYEDYLKDLPGCIA 253
Query: 340 AAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRSFEFLSTPLTQDQIEQLAAYLD 399
R +FL L+++QI++L +L+
Sbjct: 254 -------------------------------------RIADFLGKKLSEEQIQRLCEHLN 276
Query: 400 IKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKSKFSSELNMQADKWIEENLRNT 459
+ F+ N +VN + +G+ A + FIR+GK+G W+ F E+ QA+KWI++NL++T
Sbjct: 277 FEKFKNNGAVNMEDYREIGI-LADGEHFIRKGKAGCWRDYFDEEMTKQAEKWIKDNLKDT 335
Query: 460 DIRFP 464
D+R+P
Sbjct: 336 DLRYP 340
>d3bfxa1 c.37.1.5 (A:12-296) Sulfotransferase Sult1c2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 121 bits (305), Expect = 4e-32
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
L + +I +F +PDD+ + T+P++GTTW QE+V +I + E+ + +
Sbjct: 8 TLLQPATVDNWSQIQSFEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEKCQRAIIQH 67
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
R PF+E+ E+ + R +KTH+
Sbjct: 68 RHPFIEWARPPQP-------------------------SGVEKAKAMPSPRILKTHLSTQ 102
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
LLPP + K +YVARN KD VSY++ ++ L G ++ ++ F N
Sbjct: 103 LLPPSFWENNCKFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFING 155
Score = 100 bits (250), Expect = 2e-24
Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 39/274 (14%)
Query: 191 LYKLFRTLDFTGDFDTFWNYFQNDLGKKMRSSVPSVVVSTNSQPGDRRCWVQIPTRTEIY 250
+ + + D + + + R PS V + P R + T+
Sbjct: 48 VDMIEQNGDVEKCQRAIIQHRHPFI-EWARPPQPSGVEKAKAMPSPRILKTHLSTQLLPP 106
Query: 251 VRNFLLLEIIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHV 310
+ +YVARN KD VSY++ ++ L G ++ ++ F N V W +++HV
Sbjct: 107 SFWENNCKFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFINGKVVWGSWFDHV 166
Query: 311 KEGWSHRDNPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSN 370
K W +D +LFLFYED+ ++
Sbjct: 167 KGWWEMKDRHQILFLFYEDIKRDPKHEI-------------------------------- 194
Query: 371 CGLAALRSFEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQ 430
+ +F+ + + ++++ + + NP N + + + F+R+
Sbjct: 195 -----RKVMQFMGKKVDETVLDKIVQETSFEKMKENPMTNRSTVSK-SILDQSISSFMRK 248
Query: 431 GKSGGWKSKFSSELNMQADKWIEENLRNTDIRFP 464
G G WK+ F+ N + D+ + T I F
Sbjct: 249 GTVGDWKNHFTVAQNERFDEIYRRKMEGTSINFS 282
>d1g3ma_ c.37.1.5 (A:) Estrogen sulfotransferase (STE, sult1e1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 290
Score = 117 bits (293), Expect = 2e-30
Identities = 48/172 (27%), Positives = 71/172 (41%), Gaps = 25/172 (14%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
L + + + F RPDD+ + T+P+SGTTW E+V++I + E+ + +
Sbjct: 15 ILMYKDFVKYWDNVEAFQARPDDLVIATYPKSGTTWVSEIVYMIYKEGDVEKCKEDVIFN 74
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
R PFLE +QL E R +KTH+P
Sbjct: 75 RIPFLEC-------------------------RKENLMNGVKQLDEMNSPRIVKTHLPPE 109
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQN 213
LLP K+IY+ RN KDVAVS++ + + G F F F
Sbjct: 110 LLPASFWEKDCKIIYLCRNAKDVAVSFYYFFLMVAGHPNPGSFPEFVEKFMQ 161
Score = 86.4 bits (213), Expect = 2e-19
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 38/208 (18%)
Query: 257 LEIIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSH 316
+IIY+ RN KDVAVS++ + + G F F F V + ++ HVK W
Sbjct: 120 CKIIYLCRNAKDVAVSFYYFFLMVAGHPNPGSFPEFVEKFMQGQVPYGSWYKHVKSWWEK 179
Query: 317 RDNPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAAL 376
+P VLFLFYED+ ++ + IH
Sbjct: 180 GKSPRVLFLFYEDLKEDIRKEVIKLIH--------------------------------- 206
Query: 377 RSFEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGW 436
FL +++ ++++ + + + NPS N+ L + + F+R+G +G W
Sbjct: 207 ----FLERKPSEELVDRIIHHTSFQEMKNNPSTNYTTLPD-EIMNQKLSPFMRKGITGDW 261
Query: 437 KSKFSSELNMQADKWIEENLRNTDIRFP 464
K+ F+ LN + DK E+ ++ + ++F
Sbjct: 262 KNHFTVALNEKFDKHYEQQMKESTLKFR 289
>d1ls6a_ c.37.1.5 (A:) Aryl sulfotransferase sult1a {Human (Homo
sapiens) [TaxId: 9606]}
Length = 288
Score = 114 bits (285), Expect = 3e-29
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
+ + +F RPDD+ + T+P+SGTTW +++ +I G + E+ P+
Sbjct: 11 VPLIKYFAEALGPLQSFQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFM 70
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
R PFLEF E L++ R +KTH+PL+
Sbjct: 71 RVPFLEFKAPGIP-------------------------SGMETLKDTPAPRLLKTHLPLA 105
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
LLP L+ KV+YVARN KDVAVSY++ Y + + G +D+F F
Sbjct: 106 LLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPGTWDSFLEKFMVG 158
Score = 88.7 bits (219), Expect = 2e-20
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 38/207 (18%)
Query: 257 LEIIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSH 316
++++YVARN KDVAVSY++ Y + + G +D+F F V + ++ HV+E W
Sbjct: 116 VKVVYVARNAKDVAVSYYHFYHMAKVHPEPGTWDSFLEKFMVGEVSYGSWYQHVQEWWEL 175
Query: 317 RDNPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAAL 376
VL+LFYEDM +N +
Sbjct: 176 SRTHPVLYLFYEDMKEN-PKREI------------------------------------Q 198
Query: 377 RSFEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGW 436
+ EF+ L ++ ++ + + K + NP N+ + + + + S F+R+G +G W
Sbjct: 199 KILEFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSISP-FMRKGMAGDW 257
Query: 437 KSKFSSELNMQADKWIEENLRNTDIRF 463
K+ F+ N + D E + + F
Sbjct: 258 KTTFTVAQNERFDADYAEKMAGCSLSF 284
>d2z5fa_ c.37.1.5 (A:) Thyroid hormone sulfotransferase Sult1b1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 113 bits (284), Expect = 4e-29
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 24/173 (13%)
Query: 42 YLFPSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTE 101
Y + S+ EKI F RPDD+ + T+P+SGTTW E++ +I N + E+ + +TE
Sbjct: 15 YPMTCAFASNWEKIEQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFITE 74
Query: 102 RFPFLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLS 161
+ P LE + + T EQL + R +KTH+P
Sbjct: 75 KVPMLEMT------------------------LPGLRTSGIEQLEKNPSPRIVKTHLPTD 110
Query: 162 LLPPDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
LLP + K+IY+ARN KDV+VSY++ + F G ++ + F
Sbjct: 111 LLPKSFWENNCKMIYLARNAKDVSVSYYHFDLMNNLQPFPGTWEEYLEKFLTG 163
Score = 88.7 bits (219), Expect = 3e-20
Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 38/274 (13%)
Query: 191 LYKLFRTLDFTGDFDTFWNYFQNDLGKKMRSSVPSVVVSTNSQPGDRRCWVQIPTRTEIY 250
+ + D F L + S + P R +PT
Sbjct: 55 IDMILNDGDIEKCKRGFITEKVPMLEMTLPGLRTSGIEQLEKNPSPRIVKTHLPTDLLPK 114
Query: 251 VRNFLLLEIIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHV 310
++IY+ARN KDV+VSY++ + F G ++ + F V + ++ HV
Sbjct: 115 SFWENNCKMIYLARNAKDVSVSYYHFDLMNNLQPFPGTWEEYLEKFLTGKVAYGSWFTHV 174
Query: 311 KEGWSHRDNPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSN 370
K W ++ +LFL+YEDM + + +
Sbjct: 175 KNWWKKKEEHPILFLYYEDM-------------------------KENPKEEI------- 202
Query: 371 CGLAALRSFEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQ 430
+ FL L + ++++ + + + NP VN+ L V F+R+
Sbjct: 203 -----KKIIRFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTHL-PTTVMDHSKSPFMRK 256
Query: 431 GKSGGWKSKFSSELNMQADKWIEENLRNTDIRFP 464
G +G WK+ F+ N + D E + T ++F
Sbjct: 257 GTAGDWKNYFTVAQNEKFDAIYETEMSKTALQFR 290
>d1j99a_ c.37.1.5 (A:) Hydroxysteroid sulfotransferase sult2a1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 99.5 bits (247), Expect = 4e-24
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 30/158 (18%)
Query: 57 NFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVR 116
F +R +DV ++T+P+SGT W E++ L+ + + + ++ P+ ER P++E
Sbjct: 28 EFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSPWVESE------- 80
Query: 117 LAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIY 176
Y L E R +H+P+ L P +S AKVIY
Sbjct: 81 -----------------------IGYTALSETESPRLFSSHLPIQLFPKSFFSSKAKVIY 117
Query: 177 VARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
+ RNP+DV VS + +K + L ++ ++ +F
Sbjct: 118 LMRNPRDVLVSGYFFWKNMKFLKKPKSWEEYFEWFCQG 155
Score = 85.3 bits (210), Expect = 4e-19
Identities = 38/201 (18%), Positives = 73/201 (36%), Gaps = 39/201 (19%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+IY+ RNP+DV VS + +K + L ++ ++ +F V + +++H+ R+
Sbjct: 115 VIYLMRNPRDVLVSGYFFWKNMKFLKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMPMRE 174
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
N L L YE++ ++ + + L N+ S
Sbjct: 175 EKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEELNLILKNS----------------S 218
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
F+ + + N N+ L V +R+G SG WK+
Sbjct: 219 FQSM---------------------KENKMSNYSLLSVDYVVDKTQ--LLRKGVSGDWKN 255
Query: 439 KFSSELNMQADKWIEENLRNT 459
F+ DK +E + +
Sbjct: 256 HFTVAQAEDFDKLFQEKMADL 276
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 320
Score = 90.7 bits (224), Expect = 7e-21
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 21/159 (13%)
Query: 57 NFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVR 116
F + D+ +VT P+SGTTW + LV+ + N + + + P L N
Sbjct: 55 RFEAKDSDIILVTNPKSGTTWLKALVFALLNRHKFPVSS----SGNHPLLVTNPH----- 105
Query: 117 LAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIY 176
L + R + THI LP + +S K++Y
Sbjct: 106 -----------LLVPFLEGVYYESPDFDFSSLPSPRLMNTHISHLSLPESVKSSSCKIVY 154
Query: 177 VARNPKDVAVSYFNLYKLFRTLDFT-GDFDTFWNYFQND 214
RNPKD+ VS ++ K + + F
Sbjct: 155 CCRNPKDMFVSLWHFGKKLAPEETADYPIEKAVEAFCEG 193
Score = 79.9 bits (196), Expect = 4e-17
Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 43/276 (15%)
Query: 191 LYKLFRTLDFTGDFDTFWNYFQNDLGKKMRSSVPSVVVSTNSQPGDRRCWVQIPTRTEIY 250
L + + +G+ + S +S P R I +
Sbjct: 84 LNRHKFPVSSSGNHPLLVTNPHLLVPFLEGVYYESPDFDFSSLPSPRLMNTHISHLSLPE 143
Query: 251 VRNFLLLEIIYVARNPKDVAVSYFNLYKLFRTLDFT-GDFDTFWNYFQNDLVGWAPYWNH 309
+I+Y RNPKD+ VS ++ K + + F P+W+H
Sbjct: 144 SVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPEETADYPIEKAVEAFCEGKFIGGPFWDH 203
Query: 310 VKEGW-SHRDNPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGIL 368
+ E W + R+NPN + + K + M
Sbjct: 204 ILEYWYASRENPNKVLFVTYEELKKQTEVEM----------------------------- 234
Query: 369 SNCGLAALRSFEFLSTPLTQ-DQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGF 427
R EFL + +++ ++ ++ +L ++ F
Sbjct: 235 -------KRIAEFLECGFIEEEEVREIVKLCSFESLSNLEVNKEGKLPN----GIETKTF 283
Query: 428 IRQGKSGGWKSKFSSELNMQADKWIEENLRNTDIRF 463
R+G+ GGW+ S L + D+ IEE + + ++F
Sbjct: 284 FRKGEIGGWRDTLSESLAEEIDRTIEEKFKGSGLKF 319
>d1q20a_ c.37.1.5 (A:) Cholesterol sulfotransferase sult2b1b {Human
(Homo sapiens) [TaxId: 9606]}
Length = 294
Score = 86.1 bits (212), Expect = 2e-19
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 57 NFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVR 116
VR DD++++T+P+SGTTW E++ LI + R+ P+ ER P+ E
Sbjct: 38 TQDVRDDDIFIITYPKSGTTWMIEIICLILKEGDPSWIRSVPIWERAPWCETI------- 90
Query: 117 LAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIY 176
L + R + +H+P+ + +S AKVIY
Sbjct: 91 -----------------------VGAFSLPDQYSPRLMSSHLPIQIFTKAFFSSKAKVIY 127
Query: 177 VARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
+ RNP+DV VS ++ K+ L G D F F
Sbjct: 128 MGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKG 165
Score = 64.5 bits (156), Expect = 4e-12
Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 38/201 (18%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLVGWAPYWNHVKEGWSHRD 318
+IY+ RNP+DV VS ++ K+ L G D F F V + +++H+K +
Sbjct: 125 VIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLRMKG 184
Query: 319 NPNVLFLFYEDMNKNELLSCMAAIHAIHTRYATAVLRRYHMNTTVFGGILSNCGLAALRS 378
N LF+ YE++ ++ S R
Sbjct: 185 KDNFLFITYEELQQDLQGSVE-------------------------------------RI 207
Query: 379 FEFLSTPLTQDQIEQLAAYLDIKNFRANPSVNFDQLIRVGVCRAQSDGFIRQGKSGGWKS 438
FL PL ++ + + A+ +AN N+ L + + F+R+G G WK+
Sbjct: 208 CGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLLPPSLLDHRRGA-FLRKGVCGDWKN 266
Query: 439 KFSSELNMQADKWIEENLRNT 459
F+ + D+ + +R
Sbjct: 267 HFTVAQSEAFDRAYRKQMRGM 287
>d1vkja_ c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 258
Score = 49.6 bits (117), Expect = 3e-07
Identities = 7/83 (8%), Positives = 27/83 (32%), Gaps = 9/83 (10%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQND--------LVGWAPYWNHV 310
++ + R+P + +S + + L + + D + + Y H+
Sbjct: 93 LLLILRDPSERVLSDYTQVL-YNHLQKHKPYPPIEDLLMRDGRLNLDYKALNRSLYHAHM 151
Query: 311 KEGWSHRDNPNVLFLFYEDMNKN 333
++ + + + ++
Sbjct: 152 LNWLRFFPLGHIHIVDGDRLIRD 174
Score = 39.9 bits (92), Expect = 4e-04
Identities = 17/151 (11%), Positives = 42/151 (27%), Gaps = 25/151 (16%)
Query: 64 DVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVRLAEFRAE 123
++ + GT E++ L + E E + F ++
Sbjct: 7 QTIIIGVRKGGTRALLEMLSLHPDVAAAEN-------------EVHFFDWEEHYSQGLGW 53
Query: 124 NSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIYVARNPKD 183
+ ++ E T F +P + M +++ + R+P +
Sbjct: 54 YLTQMPFS--------SPHQLTVEKTPAYFTSPKVPERIHS---MNPTIRLLLILRDPSE 102
Query: 184 VAVSYFNLYKLFRTLDFTGDFDTFWNYFQND 214
+S + + L + + D
Sbjct: 103 RVLSDYTQVL-YNHLQKHKPYPPIEDLLMRD 132
>d1nsta_ c.37.1.5 (A:) Heparan sulfate
N-deacetylase/N-sulfotransferase domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 301
Score = 43.0 bits (100), Expect = 4e-05
Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 11/86 (12%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFR-----------TLDFTGDFDTFWNYFQNDLVGWAPYW 307
++ + NP D A S++ + + D + QN + Y
Sbjct: 121 VLTILINPADRAYSWYQHQRAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYA 180
Query: 308 NHVKEGWSHRDNPNVLFLFYEDMNKN 333
H++ S +L L + +
Sbjct: 181 THIERWLSAYHANQILVLDGKLLRTE 206
Score = 40.7 bits (94), Expect = 2e-04
Identities = 22/176 (12%), Positives = 45/176 (25%), Gaps = 20/176 (11%)
Query: 45 PSKYESDAEKIYNFPVRPDDVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFP 104
+++ K P + ++ ++GTT +L + ++ E
Sbjct: 10 DKRHKDIWSKEKTCDRFPK-LLIIGPQKTGTTALYL--FLGMHPDLSSNYPSSETFEEIQ 66
Query: 105 FLEFNVFVDNVRLAEFRAENSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLP 164
F + + + N + + Y R
Sbjct: 67 FFNGHNYHKGIDWYMEFFPIPSNTTSDFYFE--KSANYFDSEVAPRRAA----------- 113
Query: 165 PDLMTSGAKVIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQNDLGKKMR 220
+ AKV+ + NP D A S++ D TF +
Sbjct: 114 --ALLPKAKVLTILINPADRAYSWYQHQ--RAHDDPVALKYTFHEVITAGSDASSK 165
>d1t8ta_ c.37.1.5 (A:) Heparan sulfate glucosamine
3-O-sulfotransferase 3 {Human (Homo sapiens) [TaxId:
9606]}
Length = 271
Score = 42.2 bits (98), Expect = 6e-05
Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 6/100 (6%)
Query: 240 WVQIPTRTEIYVRNFLLLEIIYVARNPKDVAVSYFNLYKLFRTLDFTGDFDTFWNYFQ-- 297
+ ++I V R+P A+S + R T + TF N
Sbjct: 84 YFVTREAPARISAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTAGL 143
Query: 298 ----NDLVGWAPYWNHVKEGWSHRDNPNVLFLFYEDMNKN 333
+ Y H++ H +LF+ E + +
Sbjct: 144 IDTSWSAIQIGIYAKHLEHWLRHFPIRQMLFVSGERLISD 183
Score = 36.4 bits (83), Expect = 0.005
Identities = 27/150 (18%), Positives = 44/150 (29%), Gaps = 26/150 (17%)
Query: 64 DVWVVTFPRSGTTWTQELVWLIANGLNYEEARTTPLTERFPFLEFNVFVDNVRLAEFRAE 123
++ + GT E +L + +R + D +
Sbjct: 19 QAIIIGVKKGGTRALLE--FLRVHPDVRAVGAEPHFFDRSYDKGLAWYRDLMP------- 69
Query: 124 NSGNLEHQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIYVARNPKD 183
L+ Q ++ TP Y RE R M+ K+I V R+P
Sbjct: 70 --RTLDGQITME--KTPSYFVTREAPARISA-------------MSKDTKLIVVVRDPVT 112
Query: 184 VAVSYFNLYKLFRTLDFTGDFDTFWNYFQN 213
A+S + R T + TF N
Sbjct: 113 RAISDYTQTLSKRPDIPTFESLTFKNRTAG 142
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium
smegmatis [TaxId: 1772]}
Length = 265
Score = 39.3 bits (90), Expect = 5e-04
Identities = 17/183 (9%), Positives = 39/183 (21%), Gaps = 23/183 (12%)
Query: 61 RPDDVWVVTFPRSGTTWTQELV-----------WLIANGLNYEEARTTPLTERFPFLEFN 109
P V+ RSG+T E + + +
Sbjct: 2 HPTAYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPNTSMSPQPREWFADVEDQSIL 61
Query: 110 VFVDNVRLAEFRAENSGNLE--HQEIIDSIATPQYEQLRECTGRRFIKTHIPLSLLPPDL 167
+D + + + Q + + +L ++ L
Sbjct: 62 RLLDPLIEGKPDLAPATIWRDYIQTVGRTPNGVWGGKLMWNQTPLLVQRAKDLPDRSGSG 121
Query: 168 MTSGA---------KVIYVARNPKDVAVSYFNLYKLFRTLDF-TGDFDTFWNYFQNDLGK 217
+ S + + AVS++ + D Y +
Sbjct: 122 LLSAIRDVVGSDPVLIHIHRPDVVSQAVSFWRAVQTRVWRGRPDPVRDARAEYHAGAIAH 181
Query: 218 KMR 220
+
Sbjct: 182 VIT 184
Score = 35.5 bits (80), Expect = 0.009
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Query: 259 IIYVARNPKDVAVSYFNLYKLFRTLDF-TGDFDTFWNYFQNDLVGWAPYWNHVKEGWSH- 316
I + AVS++ + D Y + +EGW
Sbjct: 137 IHIHRPDVVSQAVSFWRAVQTRVWRGRPDPVRDARAEYHAGAIAHVITMLRAQEEGWRAW 196
Query: 317 --RDNPNVLFLFYEDMNKN 333
+N + + Y + +N
Sbjct: 197 FTEENVEPIDVDYPYLWRN 215
>d1hc1a1 a.85.1.1 (A:5-135) Hemocyanin, N-terminal domain {Spiny
lobster (Panulirus interruptus) [TaxId: 6735]}
Length = 131
Score = 25.9 bits (57), Expect = 6.3
Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 6/51 (11%)
Query: 251 VRNFLLLEIIYVARNPKDVAVSYFN------LYKLFRTLDFTGDFDTFWNY 295
L+ E+ + S FN LF L+ ++ F +
Sbjct: 48 AVETLMKELNDHRLLEQRHWYSLFNTRQRKEALMLFAVLNQCKEWYCFRSN 98
Score = 25.5 bits (56), Expect = 7.7
Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 12/98 (12%)
Query: 125 SGNLEHQ----EIIDSIATP-QYEQLRECTGRRFIKTHIPLSLLPPDLMTSGAKVIYVAR 179
+GN + Q ++D I P +Y L++ + + + K + R
Sbjct: 1 TGNAQKQQDINHLLDKIYEPTKYPDLKDIAENFNPLGDTSIYNDHGAAVETLMKELNDHR 60
Query: 180 -NPKDVAVSYFN------LYKLFRTLDFTGDFDTFWNY 210
+ S FN LF L+ ++ F +
Sbjct: 61 LLEQRHWYSLFNTRQRKEALMLFAVLNQCKEWYCFRSN 98
>d7reqb1 c.1.19.1 (B:16-475) Methylmalonyl-CoA mutase beta subunit,
domain 1 {Propionibacterium freudenreichii, subsp.
shermanii [TaxId: 1744]}
Length = 460
Score = 26.3 bits (57), Expect = 9.3
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 70 FPRSGTTWTQELVWLIANGLNYEEA---RTTPLTERFPFLEFNVFVDN 114
+ +G EL W +A G Y A + TE F + F V +
Sbjct: 226 YHNAGAGDVAELAWALATGAEYVRALVEQGFTATEAFDTINFRVTATH 273
>d3euga_ c.18.1.1 (A:) Uracil-DNA glycosylase {Escherichia coli
[TaxId: 562]}
Length = 225
Score = 25.8 bits (56), Expect = 9.9
Identities = 7/55 (12%), Positives = 15/55 (27%)
Query: 293 WNYFQNDLVGWAPYWNHVKEGWSHRDNPNVLFLFYEDMNKNELLSCMAAIHAIHT 347
+ +GW + + V + V L+ K + H +
Sbjct: 127 GQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKA 181
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.137 0.430
Gapped
Lambda K H
0.267 0.0506 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,866,962
Number of extensions: 90612
Number of successful extensions: 313
Number of sequences better than 10.0: 1
Number of HSP's gapped: 298
Number of HSP's successfully gapped: 38
Length of query: 465
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 377
Effective length of database: 1,199,356
Effective search space: 452157212
Effective search space used: 452157212
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.5 bits)