BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17268
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3X4|BSCL2_DROME Seipin OS=Drosophila melanogaster GN=Seipin PE=2 SV=1
Length = 370
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 172/242 (71%)
Query: 14 ELLKQRSIKELQNVWEKIFHSSMLVLLSASVLWISIFLYIAFYYTYIPNISHVRPVHLKF 73
+ ++ ++ +++ V E + ++ ++W+++F+Y AFYY Y+P ISH RPVH++F
Sbjct: 35 DRVRSKADEKVGTVRELVLRLGLIAFAVVLIIWLAVFMYAAFYYVYMPAISHTRPVHMQF 94
Query: 74 NACDEQKGVCSYPTAHVQLTKRHQLLMVGQPYKILMHLEMPESPTNIELGMFMVCAQLKD 133
C E C++P AHV LTK+ QLLMVGQ YK++++++MPESP N+ELGMFMVCA+++D
Sbjct: 95 KTCLETSTPCTFPHAHVSLTKKQQLLMVGQAYKVIVNIDMPESPQNLELGMFMVCAEMRD 154
Query: 134 KTGDLISHSCRSAMLHYRSSLLITLKTLVQAPFLILGGYEEKQTLTLELFSEYEEDQNHP 193
L HSCRSAM+ YRS L+ + T V +P +LG EE Q + +E+FS Y E++ HP
Sbjct: 155 YDSMLRGHSCRSAMMRYRSPLIRMISTWVLSPLYVLGWKEEFQQVPVEIFSRYLEERQHP 214
Query: 194 VTDIYIEVQSRFIHIYSASIHINAALSGLRYVMFTWPLLSAVLGISSNLIFIVFICAVSW 253
+TD+Y+E+QS+ I Y+ ++HI A +GLRY+MF WP+LSA++ IS+NL FI+ + +SW
Sbjct: 215 ITDVYVEIQSQKIQFYTVTLHIVADFTGLRYIMFNWPVLSAIVAISTNLFFILVVFLLSW 274
Query: 254 WQ 255
+
Sbjct: 275 YH 276
>sp|Q5FVJ6|BSCL2_RAT Seipin OS=Rattus norvegicus GN=Bscl2 PE=2 SV=1
Length = 377
Score = 197 bits (500), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 142/216 (65%), Gaps = 4/216 (1%)
Query: 44 VLWISIFLYIAFYYTYIPNISHVRPVHLKFNA-CDEQKG-VCSYPTAHVQLTK--RHQLL 99
+LW+S+FLY +FYY+Y+P +SH+ PVH + CD +CS+P A+V LTK R ++L
Sbjct: 41 LLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSTASLCSFPVANVSLTKSGRDRVL 100
Query: 100 MVGQPYKILMHLEMPESPTNIELGMFMVCAQLKDKTGDLISHSCRSAMLHYRSSLLITLK 159
M GQPY++ + LE+PESP N +LGMF+V + G +IS S RS MLHYRS LL L
Sbjct: 101 MYGQPYRVTLELELPESPVNQDLGMFLVTVSCYTRGGRIISTSSRSVMLHYRSQLLQMLD 160
Query: 160 TLVQAPFLILGGYEEKQTLTLELFSEYEEDQNHPVTDIYIEVQSRFIHIYSASIHINAAL 219
TLV + L+ G E+KQ L +EL+S+Y E+ P T IEV S+ + +Y A + I+A
Sbjct: 161 TLVFSSLLLFGFAEQKQLLEVELYSDYRENSYVPTTGAIIEVHSKRVQMYGAYLRIHAHF 220
Query: 220 SGLRYVMFTWPLLSAVLGISSNLIFIVFICAVSWWQ 255
+GLRY+++ +P+ A +G++SN F+ I S+ Q
Sbjct: 221 TGLRYLLYNFPMTCAFVGVASNFTFLSVIALFSYMQ 256
>sp|Q96G97|BSCL2_HUMAN Seipin OS=Homo sapiens GN=BSCL2 PE=1 SV=3
Length = 398
Score = 195 bits (495), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 142/216 (65%), Gaps = 4/216 (1%)
Query: 44 VLWISIFLYIAFYYTYIPNISHVRPVHLKFNA-CDEQK-GVCSYPTAHVQLTK--RHQLL 99
+LW+S+FLY +FYY+Y+P +SH+ PVH + CD +CS+P A+V LTK R ++L
Sbjct: 41 LLWVSVFLYGSFYYSYMPTVSHLSPVHFYYRTDCDSSTTSLCSFPVANVSLTKGGRDRVL 100
Query: 100 MVGQPYKILMHLEMPESPTNIELGMFMVCAQLKDKTGDLISHSCRSAMLHYRSSLLITLK 159
M GQPY++ + LE+PESP N +LGMF+V + G +IS S RS MLHYRS LL L
Sbjct: 101 MYGQPYRVTLELELPESPVNQDLGMFLVTISCYTRGGRIISTSSRSVMLHYRSDLLQMLD 160
Query: 160 TLVQAPFLILGGYEEKQTLTLELFSEYEEDQNHPVTDIYIEVQSRFIHIYSASIHINAAL 219
TLV + L+ G E+KQ L +EL+++Y E+ P T IE+ S+ I +Y A + I+A
Sbjct: 161 TLVFSSLLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHF 220
Query: 220 SGLRYVMFTWPLLSAVLGISSNLIFIVFICAVSWWQ 255
+GLRY+++ +P+ A +G++SN F+ I S+ Q
Sbjct: 221 TGLRYLLYNFPMTCAFIGVASNFTFLSVIVLFSYMQ 256
>sp|Q5E9P6|BSCL2_BOVIN Seipin OS=Bos taurus GN=BSCL2 PE=2 SV=1
Length = 394
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 141/216 (65%), Gaps = 4/216 (1%)
Query: 44 VLWISIFLYIAFYYTYIPNISHVRPVHLKFNA-CDEQKGV-CSYPTAHVQLTK--RHQLL 99
+LW+S+FLY +FYY+Y+P +SH+ PVH + C+ + CS+P A+V L K R ++L
Sbjct: 41 LLWVSVFLYGSFYYSYMPTVSHLSPVHFHYRTDCESSTSLLCSFPVANVTLAKGGRDRVL 100
Query: 100 MVGQPYKILMHLEMPESPTNIELGMFMVCAQLKDKTGDLISHSCRSAMLHYRSSLLITLK 159
M GQPY++ + LE+PESP N +LGMF+V + G +IS S RS MLHYRSSLL L
Sbjct: 101 MYGQPYRVTLELELPESPVNQDLGMFLVTISCYTRGGRIISTSSRSVMLHYRSSLLQMLD 160
Query: 160 TLVQAPFLILGGYEEKQTLTLELFSEYEEDQNHPVTDIYIEVQSRFIHIYSASIHINAAL 219
TLV + L+ G E+KQ L +EL+ EY E+ P T IE+ S+ I +Y A + I+A
Sbjct: 161 TLVFSSLLLFGFAEQKQLLEVELYPEYRENSYVPTTGAIIEIHSKRIQMYGAYLRIHAHF 220
Query: 220 SGLRYVMFTWPLLSAVLGISSNLIFIVFICAVSWWQ 255
+GLRY+++ +P+ A +G++SN F+ I S+ Q
Sbjct: 221 TGLRYLLYNFPMTCAFVGVASNFTFLSVIVLFSYMQ 256
>sp|Q9Z2E9|BSCL2_MOUSE Seipin OS=Mus musculus GN=Bscl2 PE=1 SV=2
Length = 383
Score = 187 bits (475), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 141/216 (65%), Gaps = 4/216 (1%)
Query: 44 VLWISIFLYIAFYYTYIPNISHVRPVHLKFNA-CDEQKG-VCSYPTAHVQLTK--RHQLL 99
+LW+S+FLY +FYY+Y+P +SH+ PVH + CD +CS+P A+V L K R ++L
Sbjct: 41 LLWVSVFLYGSFYYSYMPTVSHLSPVHFHYRTDCDSSTASLCSFPVANVSLAKSGRDRVL 100
Query: 100 MVGQPYKILMHLEMPESPTNIELGMFMVCAQLKDKTGDLISHSCRSAMLHYRSSLLITLK 159
M GQPY++ + LE+PESP N +LGMF+V + G +IS S RS MLHYRS LL L
Sbjct: 101 MYGQPYRVTLELELPESPVNQDLGMFLVTVSCYTRGGRIISTSSRSVMLHYRSQLLQVLD 160
Query: 160 TLVQAPFLILGGYEEKQTLTLELFSEYEEDQNHPVTDIYIEVQSRFIHIYSASIHINAAL 219
TL+ + L+ G E+KQ L +EL+S+Y E+ P T IE+ S+ I +Y A + I+A
Sbjct: 161 TLLFSSLLLFGFAEQKQLLEVELYSDYRENSYVPTTGAIIEIHSKRIQMYGAYLRIHAHF 220
Query: 220 SGLRYVMFTWPLLSAVLGISSNLIFIVFICAVSWWQ 255
+GLRY+++ +P+ A +G++SN F+ I S+ Q
Sbjct: 221 TGLRYLLYNFPMTCAFVGVASNFTFLSVIVLFSYMQ 256
>sp|O14119|BSCLH_SCHPO Seipin homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC3A11.04 PE=3 SV=4
Length = 249
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 34/229 (14%)
Query: 48 SIFLYIAFYYTYIPNISHVRPVHLKFNACDEQKGVCSYPTAHVQLTKRHQLLMVGQPYKI 107
S+ Y+ FY T IP+ PV+ + ++PTA V+L H + P
Sbjct: 24 SLVSYVIFYDTVIPHSVIQYPVYFNYTTG------LNFPTAEVRLD--HFSIDPRLPGTS 75
Query: 108 LMHLEMPESPTNIELGMFMVCAQLKDKTGDLISHSCRSAMLHYRSSLLITLKTLVQAPFL 167
L+ ++MP SP N +G FMV +D+ + R+ +L +RS + LK +V +P
Sbjct: 76 LLQIKMPHSPRNSAMGNFMVSVDFQDRNQRSLKQVKRTVLLPHRSPIHEYLKLIVCSPLY 135
Query: 168 ILGGYEEKQTLTLELF---------------SEYEEDQNHPVTDIYIEVQSRFIHIYSAS 212
+G EE + + LF S +N P I +++ S+ I Y A+
Sbjct: 136 FMGILEETDIVNVRLFESETFAKSFNSITTLSVRFSVKNTPAQAI-VKIYSKDIEFYEAT 194
Query: 213 IHINAALSGLRYVMFTWPLLSAVL---------GISSNLIFIVFICAVS 252
+ + L G+R+ M+T +SA L GI+S +I + + + S
Sbjct: 195 LAFASKLHGMRWFMYTHK-VSAFLVFTSLFWFTGITSTIITYLIVSSTS 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,855,501
Number of Sequences: 539616
Number of extensions: 4051651
Number of successful extensions: 11398
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 11380
Number of HSP's gapped (non-prelim): 11
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)