BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17270
(429 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/371 (52%), Positives = 244/371 (65%), Gaps = 64/371 (17%)
Query: 13 QVLHDHICYRYEILEVIGKGSFGQVIRALDHKTNTH-ALKYYGNQLTEFERTEIEKYLEI 71
QV HDH+ YRYE+L+VIGKGSFGQV++A DHK + H ALK N+
Sbjct: 89 QVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--------------- 133
Query: 72 WYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVI 131
KRFH QA E+RIL+HLRK+D D++ NVI
Sbjct: 134 -------------------------------KRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 132 HMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENII 191
HMLE F FRNH+C++FEL+++NLYELIK+N +QGFSL L+R+FA S++QCL LH+ II
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 192 HCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDM 251
HCDLKPEN+LLKQ+G S IKVIDFGSSCY HQRVYT IQSRFYR+PEVILG YG PIDM
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDM 282
Query: 252 WSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCI 311
WSLGCILAEL TG PL PGE+E +QLAC++E+LG P ++++ + R + F KG PR
Sbjct: 283 WSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYC 342
Query: 312 TNSK----------GRKRK------PGSKDMASVLR-CNDKAFVDFVTQCFNWDSKKRLT 354
T + GR R+ P S++ + L+ C+D F+DF+ QC WD R+T
Sbjct: 343 TVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402
Query: 355 PDEALRHEWLK 365
P +ALRH WL+
Sbjct: 403 PGQALRHPWLR 413
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/371 (52%), Positives = 244/371 (65%), Gaps = 64/371 (17%)
Query: 13 QVLHDHICYRYEILEVIGKGSFGQVIRALDHKTNTH-ALKYYGNQLTEFERTEIEKYLEI 71
QV HDH+ YRYE+L+VIGKGSFGQV++A DHK + H ALK N+
Sbjct: 89 QVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--------------- 133
Query: 72 WYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVI 131
KRFH QA E+RIL+HLRK+D D++ NVI
Sbjct: 134 -------------------------------KRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 132 HMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENII 191
HMLE F FRNH+C++FEL+++NLYELIK+N +QGFSL L+R+FA S++QCL LH+ II
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 192 HCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDM 251
HCDLKPEN+LLKQ+G S IKVIDFGSSCY HQRVYT IQSRFYR+PEVILG YG PIDM
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDM 282
Query: 252 WSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCI 311
WSLGCILAEL TG PL PGE+E +QLAC++E+LG P ++++ + R + F KG PR
Sbjct: 283 WSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYC 342
Query: 312 TNSK----------GRKRK------PGSKDMASVLR-CNDKAFVDFVTQCFNWDSKKRLT 354
T + GR R+ P S++ + L+ C+D F+DF+ QC WD R+T
Sbjct: 343 TVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402
Query: 355 PDEALRHEWLK 365
P +ALRH WL+
Sbjct: 403 PGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/371 (51%), Positives = 242/371 (65%), Gaps = 64/371 (17%)
Query: 13 QVLHDHICYRYEILEVIGKGSFGQVIRALDHKTNTH-ALKYYGNQLTEFERTEIEKYLEI 71
QV HDH+ YRYE+L+VIGKG FGQV++A DHK + H ALK N+
Sbjct: 89 QVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNE--------------- 133
Query: 72 WYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVI 131
KRFH QA E+RIL+HLRK+D D++ NVI
Sbjct: 134 -------------------------------KRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 132 HMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENII 191
HMLE F FRNH+C++FEL+++NLYELIK+N +QGFSL L+R+FA S++QCL LH+ II
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 192 HCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDM 251
HCDLKPEN+LLKQ+G S IKVIDFGSSCY HQRVY IQSRFYR+PEVILG YG PIDM
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDM 282
Query: 252 WSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCI 311
WSLGCILAEL TG PL PGE+E +QLAC++E+LG P ++++ + R + F KG PR
Sbjct: 283 WSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYC 342
Query: 312 TNSK----------GRKRK------PGSKDMASVLR-CNDKAFVDFVTQCFNWDSKKRLT 354
T + GR R+ P S++ + L+ C+D F+DF+ QC WD R+T
Sbjct: 343 TVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402
Query: 355 PDEALRHEWLK 365
P +ALRH WL+
Sbjct: 403 PGQALRHPWLR 413
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 205/368 (55%), Gaps = 69/368 (18%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RYEI +IGKGSFGQV++A D R E E W A KI
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYD-------------------RVEQE-----WV----AIKI 86
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NKK F +QA IEVR+L+ + K D + Y ++H+ +F FRN
Sbjct: 87 -----------------IKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE--NIIHCDLKPEN 199
HLC+ FE+++ NLY+L++ N++G SL L R+FA + L L +IIHCDLKPEN
Sbjct: 130 HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPEN 189
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILA 259
+LL S+IK++DFGSSC QR+Y IQSRFYRSPEV+LG+PY IDMWSLGCIL
Sbjct: 190 ILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILV 249
Query: 260 ELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS--KGTPRCITNSKGR 317
E++TG PLF G NEV+Q+ I+E+LG PP +++ A + R FF+ GT G+
Sbjct: 250 EMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGK 309
Query: 318 K--RKPGSKDMASVL----------RCNDKA--------FVDFVTQCFNWDSKKRLTPDE 357
+ + PG++ + ++L R + F D + + ++D K R+ P
Sbjct: 310 REYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYY 369
Query: 358 ALRHEWLK 365
AL+H + K
Sbjct: 370 ALQHSFFK 377
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 205/368 (55%), Gaps = 69/368 (18%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RYEI +IGKGSFGQV++A D R E E W A KI
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYD-------------------RVEQE-----WV----AIKI 67
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NKK F +QA IEVR+L+ + K D + Y ++H+ +F FRN
Sbjct: 68 -----------------IKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 110
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE--NIIHCDLKPEN 199
HLC+ FE+++ NLY+L++ N++G SL L R+FA + L L +IIHCDLKPEN
Sbjct: 111 HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPEN 170
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILA 259
+LL S+IK++DFGSSC QR+Y IQSRFYRSPEV+LG+PY IDMWSLGCIL
Sbjct: 171 ILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILV 230
Query: 260 ELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS--KGTPRCITNSKGR 317
E++TG PLF G NEV+Q+ I+E+LG PP +++ A + R FF+ GT G+
Sbjct: 231 EMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGK 290
Query: 318 K--RKPGSKDMASVL----------RCNDKA--------FVDFVTQCFNWDSKKRLTPDE 357
+ + PG++ + ++L R + F D + + ++D K R+ P
Sbjct: 291 REYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYY 350
Query: 358 ALRHEWLK 365
AL+H + K
Sbjct: 351 ALQHSFFK 358
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 250 bits (639), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 204/368 (55%), Gaps = 69/368 (18%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RYEI +IGKGSFGQV++A D R E E W A KI
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYD-------------------RVEQE-----WV----AIKI 86
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NKK F +QA IEVR+L+ + K D + Y ++H+ +F FRN
Sbjct: 87 -----------------IKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE--NIIHCDLKPEN 199
HLC+ FE+++ NLY+L++ N++G SL L R+FA + L L +IIHCDLKPEN
Sbjct: 130 HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPEN 189
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILA 259
+LL +IK++DFGSSC QR+Y IQSRFYRSPEV+LG+PY IDMWSLGCIL
Sbjct: 190 ILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILV 249
Query: 260 ELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS--KGTPRCITNSKGR 317
E++TG PLF G NEV+Q+ I+E+LG PP +++ A + R FF+ GT G+
Sbjct: 250 EMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGK 309
Query: 318 K--RKPGSKDMASVL----------RCNDKA--------FVDFVTQCFNWDSKKRLTPDE 357
+ + PG++ + ++L R + F D + + ++D K R+ P
Sbjct: 310 REYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYY 369
Query: 358 ALRHEWLK 365
AL+H + K
Sbjct: 370 ALQHSFFK 377
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 170/365 (46%), Gaps = 65/365 (17%)
Query: 17 DHICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGL 76
D + RYEI++ +G+G+FG+V+ +DHK +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHV-------------------------- 43
Query: 77 DACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY 136
A KI N R+ A E+++L+HL D +S++ + MLE+
Sbjct: 44 -AVKI-----------------VKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEW 85
Query: 137 FYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLK 196
F H+CI FEL+ L+ Y+ IK N + F L IR+ A+ + + + LH + H DLK
Sbjct: 86 FEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLK 145
Query: 197 PENVLLKQRGSSS-----------------IKVIDFGSSCYSHQRVYTYIQSRFYRSPEV 239
PEN+L Q + IKV+DFGS+ Y + T + +R YR+PEV
Sbjct: 146 PENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEV 205
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
IL L + P D+WS+GCIL E Y G +FP + E LA + ILG P +I +R+R
Sbjct: 206 ILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQ-KTRKR 264
Query: 300 LFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCND---KAFVDFVTQCFNWDSKKRLTPD 356
+F +S GR K + + D + D + + +D KR+T
Sbjct: 265 KYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR 324
Query: 357 EALRH 361
EAL+H
Sbjct: 325 EALKH 329
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 169/365 (46%), Gaps = 65/365 (17%)
Query: 17 DHICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGL 76
D + RYEI++ +G+G+FG+V+ +DHK +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHV-------------------------- 43
Query: 77 DACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY 136
A KI N R+ A E+++L+HL D +S++ + MLE+
Sbjct: 44 -AVKI-----------------VKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEW 85
Query: 137 FYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLK 196
F H+CI FEL+ L+ Y+ IK N + F L IR+ A+ + + + LH + H DLK
Sbjct: 86 FEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLK 145
Query: 197 PENVLLKQRGSSS-----------------IKVIDFGSSCYSHQRVYTYIQSRFYRSPEV 239
PEN+L Q + IKV+DFGS+ Y + T + R YR+PEV
Sbjct: 146 PENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRHYRAPEV 205
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
IL L + P D+WS+GCIL E Y G +FP + E LA + ILG P +I +R+R
Sbjct: 206 ILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQ-KTRKR 264
Query: 300 LFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCND---KAFVDFVTQCFNWDSKKRLTPD 356
+F +S GR K + + D + D + + +D KR+T
Sbjct: 265 KYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR 324
Query: 357 EALRH 361
EAL+H
Sbjct: 325 EALKH 329
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 177/368 (48%), Gaps = 71/368 (19%)
Query: 17 DHICYRYEILEVIGKGSFGQVIRALDHKTNTH--ALKYYGNQLTEFERTEIEKYLEIWYL 74
D + RYEI+ +G+G+FG+V++ +DH+ ALK N +EKY E
Sbjct: 29 DWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKN---------VEKYKE---- 75
Query: 75 GLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHML 134
A +E+ +L+ + +KD D+ + M
Sbjct: 76 ---------------------------------AARLEINVLEKINEKDPDNKNLCVQMF 102
Query: 135 EYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
++F + H+CISFEL+ L+ ++ +K NNY + + +R AF L Q ++ LH + H D
Sbjct: 103 DWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTD 162
Query: 195 LKPENVLL------------KQRG-----SSSIKVIDFGSSCYSHQRVYTYIQSRFYRSP 237
LKPEN+L K+R S++++V+DFGS+ + H+ T + +R YR+P
Sbjct: 163 LKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAP 222
Query: 238 EVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASR 297
EVIL L + P D+WS+GCI+ E Y G LF + E LA + ILG P +I +
Sbjct: 223 EVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK 282
Query: 298 RRLFFDSKGTPRCITN-SKGRKRKPGSKDMASVLRCNDK---AFVDFVTQCFNWDSKKRL 353
++ F+ +G N S GR + K + L + D + ++ KRL
Sbjct: 283 QKYFY--RGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRL 340
Query: 354 TPDEALRH 361
T EAL+H
Sbjct: 341 TLGEALQH 348
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 170/365 (46%), Gaps = 65/365 (17%)
Query: 17 DHICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGL 76
D + RYEI+ +G+G+FG+V+ LDH +
Sbjct: 47 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQV-------------------------- 80
Query: 77 DACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY 136
A KI N ++ A +E+ +L +++KD ++ + + M ++
Sbjct: 81 -ALKI-----------------IRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDW 122
Query: 137 FYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLK 196
F F H+CI+FEL+ N +E +K NN+Q + L +R A+ L LR LH + H DLK
Sbjct: 123 FNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLK 182
Query: 197 PENVLL-----------------KQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEV 239
PEN+L K ++SI+V DFGS+ + H+ T + +R YR PEV
Sbjct: 183 PENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEV 242
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
IL L + P D+WS+GCIL E Y G LF E L + +ILG P +I+ +++
Sbjct: 243 ILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQK 302
Query: 300 LFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFV---DFVTQCFNWDSKKRLTPD 356
F+ G +S GR K K + S + + V D + + +D +R+T
Sbjct: 303 YFYKG-GLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA 361
Query: 357 EALRH 361
EAL H
Sbjct: 362 EALLH 366
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 170/365 (46%), Gaps = 65/365 (17%)
Query: 17 DHICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGL 76
D + RYEI+ +G+G+FG+V+ LDH +
Sbjct: 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQV-------------------------- 48
Query: 77 DACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY 136
A KI N ++ A +E+ +L +++KD ++ + + M ++
Sbjct: 49 -ALKI-----------------IRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDW 90
Query: 137 FYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLK 196
F F H+CI+FEL+ N +E +K NN+Q + L +R A+ L LR LH + H DLK
Sbjct: 91 FNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLK 150
Query: 197 PENVLL-----------------KQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEV 239
PEN+L K ++SI+V DFGS+ + H+ T + +R YR PEV
Sbjct: 151 PENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEV 210
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
IL L + P D+WS+GCIL E Y G LF E L + +ILG P +I+ +++
Sbjct: 211 ILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQK 270
Query: 300 LFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFV---DFVTQCFNWDSKKRLTPD 356
F+ G +S GR K K + S + + V D + + +D +R+T
Sbjct: 271 YFYKG-GLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA 329
Query: 357 EALRH 361
EAL H
Sbjct: 330 EALLH 334
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 170/365 (46%), Gaps = 65/365 (17%)
Query: 17 DHICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGL 76
D + RYEI+ +G+G+FG+V+ LDH +
Sbjct: 24 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQV-------------------------- 57
Query: 77 DACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY 136
A KI N ++ A +E+ +L +++KD ++ + + M ++
Sbjct: 58 -ALKI-----------------IRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDW 99
Query: 137 FYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLK 196
F F H+CI+FEL+ N +E +K NN+Q + L +R A+ L LR LH + H DLK
Sbjct: 100 FNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLK 159
Query: 197 PENVLL-----------------KQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEV 239
PEN+L K ++SI+V DFGS+ + H+ T + +R YR PEV
Sbjct: 160 PENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEV 219
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
IL L + P D+WS+GCIL E Y G LF E L + +ILG P +I+ +++
Sbjct: 220 ILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQK 279
Query: 300 LFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFV---DFVTQCFNWDSKKRLTPD 356
F+ G +S GR K K + S + + V D + + +D +R+T
Sbjct: 280 YFYKG-GLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA 338
Query: 357 EALRH 361
EAL H
Sbjct: 339 EALLH 343
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 15/260 (5%)
Query: 121 KKDADSSYNVIHMLEYFYFRN----HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF 176
K+D+ + +++ +L++F + H+ + FE++ NL LIK+ ++G L +++ +
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 177 SLVQCLRLLHRE-NIIHCDLKPENVLLKQRGSS----SIKVIDFGSSCYSHQRVYTYIQS 231
L+ L +HR IIH D+KPENVL++ S IK+ D G++C+ + IQ+
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQT 198
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF-PGEN-----EVEQLACIMEILG 285
R YRSPEV+LG P+G D+WS C++ EL TG LF P E + + +A I+E+LG
Sbjct: 199 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
Query: 286 CPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCF 345
P ++ R FF+S+G R I+ K + + + K DF++
Sbjct: 259 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML 318
Query: 346 NWDSKKRLTPDEALRHEWLK 365
D +KR + H WLK
Sbjct: 319 QLDPRKRADAGGLVNHPWLK 338
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 15/260 (5%)
Query: 121 KKDADSSYNVIHMLEYFYFRN----HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF 176
K+D+ + +++ +L++F + H+ + FE++ NL LIK+ ++G L +++ +
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 177 SLVQCLRLLHRE-NIIHCDLKPENVLLKQRGSS----SIKVIDFGSSCYSHQRVYTYIQS 231
L+ L +HR IIH D+KPENVL++ S IK+ D G++C+ + IQ+
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQT 198
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF-PGEN-----EVEQLACIMEILG 285
R YRSPEV+LG P+G D+WS C++ EL TG LF P E + + +A I+E+LG
Sbjct: 199 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
Query: 286 CPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCF 345
P ++ R FF+S+G R I+ K + + + K DF++
Sbjct: 259 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML 318
Query: 346 NWDSKKRLTPDEALRHEWLK 365
D +KR + H WLK
Sbjct: 319 QLDPRKRADAGGLVNHPWLK 338
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 143/295 (48%), Gaps = 34/295 (11%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKR 160
N K++ A IE IL ++ D +++ V + ++ Y+ +H+C+ FE + +LYE+I R
Sbjct: 70 NIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY-DHMCLIFEPLGPSLYEIITR 128
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLK----------------- 203
NNY GF + I+ + +++ L L + ++ H DLKPEN+LL
Sbjct: 129 NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188
Query: 204 ------QRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
+ S+ IK+IDFG + + + I +R YR+PEVIL L + DMWS GC+
Sbjct: 189 KKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248
Query: 258 LAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR 317
LAELYTG LF +E LA + I+ P ++ A++ SK +
Sbjct: 249 LAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTN---GSKYVNKDELKLAWP 305
Query: 318 KRKPGSKDMASVLRC-------NDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + V +C + F DF+ D R +P E L+H++L+
Sbjct: 306 ENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 162/355 (45%), Gaps = 77/355 (21%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+++ LE +G G++ V + L+ T Y+ L K+
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGV-------------------------YVALKEVKL 40
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
EE A+ E+ ++ L+ ++ Y+VIH N
Sbjct: 41 DSEEGTPST------------------AIREISLMKELKHENIVRLYDVIHT------EN 76
Query: 142 HLCISFELMNLNLYELIKR----NNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKP 197
L + FE M+ +L + + N +G L L++ F + L+Q L H I+H DLKP
Sbjct: 77 KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKP 136
Query: 198 ENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILG-LPYGPPIDMWS 253
+N+L+ +RG +K+ DFG + V T+ + + +YR+P+V++G Y ID+WS
Sbjct: 137 QNLLINKRGQ--LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWS 194
Query: 254 LGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITN 313
GCILAE+ TG PLFPG N+ EQL I +I+G P + + + ++ + N
Sbjct: 195 CGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY-----------N 243
Query: 314 SKGRKRKPGSKDMASVLRCN-----DKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
++R P +D+ VL+ + D +DF+ + RL+ +AL H W
Sbjct: 244 PNIQQRPP--RDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L HL+ + NVI +L+ F + + + LM +L ++K Q
Sbjct: 77 ELRLLKHLKHE------NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS---QA 127
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
S ++ + L++ L+ +H IIH DLKP NV + + S ++++DFG + + + +
Sbjct: 128 LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DSELRILDFGLARQADEEM 185
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL G LFPG + ++QL IME++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 245
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P EV+ S + P KD++S+ R + +D + +
Sbjct: 246 GTPSPEVLAKISSEHARTYIQSLPPM-----------PQKDLSSIFRGANPLAIDLLGRM 294
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS +R++ EAL H +
Sbjct: 295 LVLDSDQRVSAAEALAHAY 313
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++++L + + + G L LI+ + F L+Q L H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKPEN+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 124 RVLHRDLKPENLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 232
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 233 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 365 K 365
+
Sbjct: 289 Q 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++++L + + + G L LI+ + F L+Q L H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKPEN+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 126 RVLHRDLKPENLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 234
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 235 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 365 K 365
+
Sbjct: 291 Q 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++++L + + + G L LI+ + F L+Q L H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 126 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 234
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 235 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 365 K 365
+
Sbjct: 291 Q 291
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 127/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++++L + + + G L LI+ + F L+Q L H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 125 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 233
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 234 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 365 K 365
+
Sbjct: 290 Q 290
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L HL+ + NVI +L+ F + + + LM +L ++K Q
Sbjct: 77 ELRLLKHLKHE------NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---CQA 127
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
S ++ + L++ L+ +H IIH DLKP NV + + S ++++DFG + + + +
Sbjct: 128 LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DSELRILDFGLARQADEEM 185
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL G LFPG + ++QL IME++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 245
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P EV+ S + P KD++S+ R + +D + +
Sbjct: 246 GTPSPEVLAKISSEHARTYIQSLPPM-----------PQKDLSSIFRGANPLAIDLLGRM 294
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS +R++ EAL H +
Sbjct: 295 LVLDSDQRVSAAEALAHAY 313
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKPEN+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPENLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKPEN+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 124 RVLHRDLKPENLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 232
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 233 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 365 K 365
+
Sbjct: 289 Q 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKPEN+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 125 RVLHRDLKPENLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 233
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 234 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 365 K 365
+
Sbjct: 290 Q 290
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 130 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY 187
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 238
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 239 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 365 K 365
+
Sbjct: 295 Q 295
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 127 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 235
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 236 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 365 K 365
+
Sbjct: 292 Q 292
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 130 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 187
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 238
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 239 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 365 K 365
+
Sbjct: 295 Q 295
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 122 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 230
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 231 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 365 K 365
+
Sbjct: 287 Q 287
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 124 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 232
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 233 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 365 K 365
+
Sbjct: 289 Q 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 124 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 232
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 233 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 365 K 365
+
Sbjct: 289 Q 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 122 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 230
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 231 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 365 K 365
+
Sbjct: 287 Q 287
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 122 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 230
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 231 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 365 K 365
+
Sbjct: 287 Q 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 125 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 233
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 234 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 365 K 365
+
Sbjct: 290 Q 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 126 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 234
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 235 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 365 K 365
+
Sbjct: 291 Q 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 125 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 233
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 234 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 365 K 365
+
Sbjct: 290 Q 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 124 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 232
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 233 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 365 K 365
+
Sbjct: 289 Q 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 127 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 184
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 235
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 236 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 365 K 365
+
Sbjct: 292 Q 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 123 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 232 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 365 K 365
+
Sbjct: 288 Q 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 122 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 230
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 231 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 365 K 365
+
Sbjct: 287 Q 287
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 122 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 230
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 231 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 365 K 365
+
Sbjct: 287 Q 287
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 126 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 234
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 235 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 365 K 365
+
Sbjct: 291 Q 291
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + G L LI+ + F L+Q L H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 126 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 234
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 235 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 365 K 365
+
Sbjct: 291 Q 291
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L HL+ + NVI +L+ F + + + LM +L ++K Q
Sbjct: 69 ELRLLKHLKHE------NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---CQA 119
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
S ++ + L++ L+ +H IIH DLKP NV + + ++++DFG + + + +
Sbjct: 120 LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCELRILDFGLARQADEEM 177
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL G LFPG + ++QL IME++
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVV 237
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P EV+ S + P KD++S+ R + +D + +
Sbjct: 238 GTPSPEVLAKISSEHARTYIQSLPPM-----------PQKDLSSIFRGANPLAIDLLGRM 286
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS +R++ EAL H +
Sbjct: 287 LVLDSDQRVSAAEALAHAY 305
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + + G L LI+ + F L+Q L H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 126 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 234
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 235 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 365 K 365
+
Sbjct: 291 Q 291
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 33/275 (12%)
Query: 100 YNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF--------YFRNHLCISFELMN 151
+ + F +A E+R+L H+R + NVI +L+ F + +L + F M
Sbjct: 62 FQSELFAKRAYRELRLLKHMRHE------NVIGLLDVFTPDETLDDFTDFYLVMPF--MG 113
Query: 152 LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIK 211
+L +L+K ++ I+ + +++ LR +H IIH DLKP N+ + + +K
Sbjct: 114 TDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE--DCELK 168
Query: 212 VIDFGSSCYSHQRVYTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPG 270
++DFG + + + + +R+YR+PEVIL + Y +D+WS+GCI+AE+ TG LF G
Sbjct: 169 ILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228
Query: 271 ENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVL 330
+ ++QL IM++ G PP E + KG P KD AS+L
Sbjct: 229 SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL-----------EKKDFASIL 277
Query: 331 RCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
V+ + + D+++R+T EAL H + +
Sbjct: 278 TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 139/273 (50%), Gaps = 52/273 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RYE L+ +G+G F V +A D TN Q+ ++ ++
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTN---------QIVAIKKIKL---------------- 45
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
G S +++G + AL E+++L L S N+I +L+ F ++
Sbjct: 46 -GHRSEAKDG-------------INRTALREIKLLQEL------SHPNIIGLLDAFGHKS 85
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
++ + F+ M +L E+I ++N + I+ + +Q L LH+ I+H DLKP N+L
Sbjct: 86 NISLVFDFMETDL-EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLL 144
Query: 202 LKQRGSSSIKVIDFG--SSCYSHQRVYTY-IQSRFYRSPEVILGL-PYGPPIDMWSLGCI 257
L + G +K+ DFG S S R Y + + +R+YR+PE++ G YG +DMW++GCI
Sbjct: 145 LDENGV--LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCI 202
Query: 258 LAELYTGCPLFPGENEVEQLACIMEILGCPPDE 290
LAEL P PG+++++QL I E LG P +E
Sbjct: 203 LAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE 235
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 142/324 (43%), Gaps = 60/324 (18%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYN--VIHMLEYFYFR----NHLCISFELMNLNL 154
+ + + AL E+R+L +R D + V+ +L+ F H+C+ FE++ +L
Sbjct: 72 SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHL 131
Query: 155 YELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHCDLKPENVLLK---------- 203
+ I ++NYQG L +++ ++Q L LH + IIH D+KPEN+LL
Sbjct: 132 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 191
Query: 204 ------QRGSS-------------------------------SIKVIDFGSSCYSHQRVY 226
QR + +K+ D G++C+ H+
Sbjct: 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT 251
Query: 227 TYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF---PGEN---EVEQLACI 280
IQ+R YRS EV++G Y P D+WS C+ EL TG LF GE + + +A I
Sbjct: 252 EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALI 311
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDF 340
+E+LG P ++I + FF KG + IT K + + F DF
Sbjct: 312 IELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDF 371
Query: 341 VTQCFNWDSKKRLTPDEALRHEWL 364
+ +KR T E LRH WL
Sbjct: 372 LLPMLELIPEKRATAAECLRHPWL 395
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 19/241 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ + N L + FE ++ +L + + G L LI+ + F L+Q L H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY---IQSRFYRSPEVILGLP- 244
++H DLKP+N+L+ G +IK+ DFG + V TY + + +YR+PE++LG
Sbjct: 122 RVLHRDLKPQNLLINTEG--AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D+WSLGCI AE+ T LFPG++E++QL I LG PDEV+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT-PDEVVWPGV-------- 230
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + K K +D + V+ D+ ++Q ++D KR++ AL H +
Sbjct: 231 ----TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 365 K 365
+
Sbjct: 287 Q 287
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 142/324 (43%), Gaps = 60/324 (18%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYN--VIHMLEYFYFR----NHLCISFELMNLNL 154
+ + + AL E+R+L +R D + V+ +L+ F H+C+ FE++ +L
Sbjct: 56 SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHL 115
Query: 155 YELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHCDLKPENVLLK---------- 203
+ I ++NYQG L +++ ++Q L LH + IIH D+KPEN+LL
Sbjct: 116 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 175
Query: 204 ------QRGSS-------------------------------SIKVIDFGSSCYSHQRVY 226
QR + +K+ D G++C+ H+
Sbjct: 176 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT 235
Query: 227 TYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF---PGEN---EVEQLACI 280
IQ+R YRS EV++G Y P D+WS C+ EL TG LF GE + + +A I
Sbjct: 236 EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALI 295
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDF 340
+E+LG P ++I + FF KG + IT K + + F DF
Sbjct: 296 IELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDF 355
Query: 341 VTQCFNWDSKKRLTPDEALRHEWL 364
+ +KR T E LRH WL
Sbjct: 356 LLPMLELIPEKRATAAECLRHPWL 379
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 133/260 (51%), Gaps = 29/260 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 100 ELRLLKHMKHE------NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK---CQK 150
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 208
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + + QL IM +
Sbjct: 209 TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLT 268
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G PP VI+ R NS + K ++ A V + VD + +
Sbjct: 269 GTPPASVISRMPSHE--------ARNYINSLPQMPK---RNFADVFIGANPLAVDLLEKM 317
Query: 345 FNWDSKKRLTPDEALRHEWL 364
D+ KR+T EAL H +
Sbjct: 318 LVLDTDKRITASEALAHPYF 337
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 136/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 77 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 127
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + S +K++DFG + ++ +
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DSELKILDFGLARHTDDEM 185
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 291
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 292 EKMLVLDSDKRITAAQALAHAY 313
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 136/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 73 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 123
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + S +K++DFG + ++ +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DSELKILDFGLARHTDDEM 181
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 287
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 288 EKMLVLDSDKRITAAQALAHAY 309
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS---QK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + S +K++DFG ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DSELKILDFGLCRHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX---QK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX---QK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 158/359 (44%), Gaps = 71/359 (19%)
Query: 17 DHIC---YRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWY 73
D +C +YE + IG+G++G+V +A D K G + +R ++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKN--------GGRFVALKRVRVQT------ 49
Query: 74 LGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHM 133
GEE + + + EV +L HL + NV+ +
Sbjct: 50 ---------GEEGMPLS------------------TIREVAVLRHL---ETFEHPNVVRL 79
Query: 134 LEYFYF-----RNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
+ L + FE ++ +L + + G I+ F L++ L LH
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYT-YIQSRFYRSPEVILGLPYG 246
++H DLKP+N+L+ G IK+ DFG + YS Q T + + +YR+PEV+L Y
Sbjct: 140 RVVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 197
Query: 247 PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKG 306
P+D+WS+GCI AE++ PLF G ++V+QL I++++G P +E
Sbjct: 198 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE---------------D 242
Query: 307 TPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
PR + + ++ + + D+ D + +C ++ KR++ AL H + +
Sbjct: 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 82 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 132
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKILDFGLARHTDDEM 190
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 251 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 296
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 297 EKMLVLDSDKRITAAQALAHAY 318
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 135/260 (51%), Gaps = 29/260 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 77 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 127
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 185
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 246 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 294
Query: 345 FNWDSKKRLTPDEALRHEWL 364
DS KR+T +AL H +
Sbjct: 295 LVLDSDKRITAAQALAHAYF 314
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 158/359 (44%), Gaps = 71/359 (19%)
Query: 17 DHIC---YRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWY 73
D +C +YE + IG+G++G+V +A D K G + +R ++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKN--------GGRFVALKRVRVQT------ 49
Query: 74 LGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHM 133
GEE + + + EV +L HL + NV+ +
Sbjct: 50 ---------GEEGMPLS------------------TIREVAVLRHL---ETFEHPNVVRL 79
Query: 134 LEYFYF-----RNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
+ L + FE ++ +L + + G I+ F L++ L LH
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYT-YIQSRFYRSPEVILGLPYG 246
++H DLKP+N+L+ G IK+ DFG + YS Q T + + +YR+PEV+L Y
Sbjct: 140 RVVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 197
Query: 247 PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKG 306
P+D+WS+GCI AE++ PLF G ++V+QL I++++G P +E
Sbjct: 198 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE---------------D 242
Query: 307 TPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
PR + + ++ + + D+ D + +C ++ KR++ AL H + +
Sbjct: 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 76 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 126
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKILDFGLARHTDDEM 184
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 290
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 291 EKMLVLDSDKRITAAQALAHAY 312
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 135/259 (52%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 90 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 140
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 198
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 258
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 259 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 307
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS KR+T +AL H +
Sbjct: 308 LVLDSDKRITAAQALAHAY 326
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 135/259 (52%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 91 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 141
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 199
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 260 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 308
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS KR+T +AL H +
Sbjct: 309 LVLDSDKRITAAQALAHAY 327
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 135/259 (52%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 81 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 131
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 189
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 190 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 249
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 250 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 298
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS KR+T +AL H +
Sbjct: 299 LVLDSDKRITAAQALAHAY 317
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 76 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 126
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DXELKILDFGLARHTDDEM 184
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 290
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 291 EKMLVLDSDKRITAAQALAHAY 312
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 135/259 (52%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 240 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 288
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS KR+T +AL H +
Sbjct: 289 LVLDSDKRITAAQALAHAY 307
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 158/359 (44%), Gaps = 71/359 (19%)
Query: 17 DHIC---YRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWY 73
D +C +YE + IG+G++G+V +A D K G + +R ++
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKN--------GGRFVALKRVRVQT------ 49
Query: 74 LGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHM 133
GEE + + + EV +L HL + NV+ +
Sbjct: 50 ---------GEEGMPLS------------------TIREVAVLRHL---ETFEHPNVVRL 79
Query: 134 LEYFYF-----RNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
+ L + FE ++ +L + + G I+ F L++ L LH
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYT-YIQSRFYRSPEVILGLPYG 246
++H DLKP+N+L+ G IK+ DFG + YS Q T + + +YR+PEV+L Y
Sbjct: 140 RVVHRDLKPQNILVTSSGQ--IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYA 197
Query: 247 PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKG 306
P+D+WS+GCI AE++ PLF G ++V+QL I++++G P +E
Sbjct: 198 TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE---------------D 242
Query: 307 TPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
PR + + ++ + + D+ D + +C ++ KR++ AL H + +
Sbjct: 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 135/259 (52%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 67 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 117
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 175
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 236 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 284
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS KR+T +AL H +
Sbjct: 285 LVLDSDKRITAAQALAHAY 303
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 94 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 144
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 202
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 203 XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 308
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 309 EKMLVLDSDKRITAAQALAHAY 330
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 77 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 127
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 185
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 291
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 292 EKMLVLDSDKRITAAQALAHAY 313
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 138/286 (48%), Gaps = 42/286 (14%)
Query: 100 YNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
++K F + L E++IL H + ++ + +N I + F N + I ELM +L+ +I
Sbjct: 47 FDKPLFALRTLREIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVI- 104
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
+ Q S I+ F + ++ +++LH N+IH DLKP N+L+ + +KV DFG
Sbjct: 105 --STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN--SNCDLKVCDFGLAR 160
Query: 217 ---------SSCYSHQRVYT-YIQSRFYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGC 265
S Q T Y+ +R+YR+PEV+L Y +D+WS GCILAEL+
Sbjct: 161 IIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
Query: 266 PLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRK------R 319
P+FPG + QL I I+G P S RCI + + R+
Sbjct: 221 PIFPGRDYRHQLLLIFGIIGTP---------------HSDNDLRCIESPRAREYIKSLPM 265
Query: 320 KPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
P + R N K +D + + +D KR+T EAL H +L+
Sbjct: 266 YPAAPLEKMFPRVNPKG-IDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 82 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 132
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 190
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 250
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 251 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 296
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 297 EKMLVLDSDKRITAAQALAHAY 318
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 73 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 123
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 181
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 287
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 288 EKMLVLDSDKRITAAQALAHAY 309
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 83 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 133
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 191
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 297
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 298 EKMLVLDSDKRITAAQALAHAY 319
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 77 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 127
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 185
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 245
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 246 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 291
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 292 EKMLVLDSDKRITAAQALAHAY 313
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 83 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 133
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 191
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 297
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 298 EKMLVLDSDKRITAAQALAHAY 319
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 94 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 144
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 202
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 203 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 263 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 308
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 309 EKMLVLDSDKRITAAQALAHAY 330
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 83 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 133
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 191
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 251
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 252 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 297
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 298 EKMLVLDSDKRITAAQALAHAY 319
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 90 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 140
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 198
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 258
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 259 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 304
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 305 EKMLVLDSDKRITAAQALAHAY 326
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 76 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 126
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 184
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 290
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 291 EKMLVLDSDKRITAAQALAHAY 312
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 76 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 126
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 184
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 244
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 245 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 290
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 291 EKMLVLDSDKRITAAQALAHAY 312
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 91 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 141
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 199
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 260 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 305
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 306 EKMLVLDSDKRITAAQALAHAY 327
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 70 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 120
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 178
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 179 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 238
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 239 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 284
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 285 EKMLVLDSDKRITAAQALAHAY 306
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 73 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 123
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 181
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 287
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 288 EKMLVLDSDKRITAAQALAHAY 309
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 78 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 128
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 186
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 292
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 293 EKMLVLDSDKRITAAQALAHAY 314
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 73 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 123
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 181
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 241
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 242 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 287
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 288 EKMLVLDSDKRITAAQALAHAY 309
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 69 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 119
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 120 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 177
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 237
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 238 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 283
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 284 EKMLVLDSDKRITAAQALAHAY 305
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 78 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 128
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTADEM 186
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 292
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 293 EKMLVLDSDKRITAAQALAHAY 314
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 78 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 128
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTADEM 186
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 292
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 293 EKMLVLDSDKRITAAQALAHAY 314
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 68 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 118
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 176
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 236
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 237 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 282
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 283 EKMLVLDSDKRITAAQALAHAY 304
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 78 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 128
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTADEM 186
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 246
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 292
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 293 EKMLVLDSDKRITAAQALAHAY 314
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 67 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 117
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 175
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 236 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 281
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 282 EKMLVLDSDKRITAAQALAHAY 303
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 68 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 118
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 176
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 236
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 237 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 282
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 283 EKMLVLDSDKRITAAQALAHAY 304
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 169/359 (47%), Gaps = 83/359 (23%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTH-ALKYYGNQLTEFE-RTEIEKYL-EIWYLGLDA 78
RY L+ IG+G++G V A DH T A+K +++ FE +T ++ L EI L
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIK----KISPFEHQTYCQRTLREIQIL---- 95
Query: 79 CKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY 138
RF H+ +I +R D LR ++ +V
Sbjct: 96 ------------------------LRFRHENVIGIR--DILRASTLEAMRDVY------- 122
Query: 139 FRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPE 198
I +LM +LY+L+K Q S I F + +++ L+ +H N++H DLKP
Sbjct: 123 ------IVQDLMETDLYKLLKS---QQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPS 173
Query: 199 NVLLKQRGSSSIKVIDFG-----SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDM 251
N+L+ + +K+ DFG + H T + +R+YR+PE++L Y ID+
Sbjct: 174 NLLINT--TCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDI 231
Query: 252 WSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCI 311
WS+GCILAE+ + P+FPG++ ++QL I+ ILG P E +N CI
Sbjct: 232 WSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN----------------CI 275
Query: 312 TNSKGR---KRKPGSKDM--ASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
N K R + P + A + +D +D + + ++ KR+T +EAL H +L+
Sbjct: 276 INMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLE 334
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 141/273 (51%), Gaps = 29/273 (10%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIH-MLEYFYFRNHLCISFELMNLNLYELIK 159
N KR L E++IL H + + + +++ + Y F++ + + +LM +L+++I
Sbjct: 96 NAKR----TLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS-VYVVLDLMESDLHQII- 149
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
++ Q +L +R F + L++ L+ +H +IH DLKP N+L+ + + +K+ DFG
Sbjct: 150 -HSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELKIGDFGMAR 206
Query: 217 ---SSCYSHQRVYT-YIQSRFYRSPEVILGL-PYGPPIDMWSLGCILAELYTGCPLFPGE 271
+S HQ T Y+ +R+YR+PE++L L Y ID+WS+GCI E+ LFPG+
Sbjct: 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266
Query: 272 NEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLR 331
N V QL IM +LG P VI R+ + P R+P + +V
Sbjct: 267 NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLP---------PRQPVPWE--TVYP 315
Query: 332 CNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
D+ + + + ++ R++ ALRH +L
Sbjct: 316 GADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 135/259 (52%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
++ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 240 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 288
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS KR+T +AL H +
Sbjct: 289 LVLDSDKRITAAQALAHAY 307
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 135/260 (51%), Gaps = 29/260 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 67 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 117
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 175
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
++ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 176 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 236 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 284
Query: 345 FNWDSKKRLTPDEALRHEWL 364
DS KR+T +AL H +
Sbjct: 285 LVLDSDKRITAAQALAHAYF 304
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 131/259 (50%), Gaps = 24/259 (9%)
Query: 113 VRILDHLRKKDADSSYNVIHMLEYFYFRN-----HLCISFELMNLNLYELIKRNNYQGFS 167
VR + LR+ +A NV+ +++ + + FE ++ +L + + G
Sbjct: 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 118
Query: 168 LGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVY 226
I+ ++ L LH I+H DLKPEN+L+ G+ +K+ DFG + YS+Q
Sbjct: 119 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT--VKLADFGLARIYSYQMAL 176
Query: 227 T-YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILG 285
T + + +YR+PEV+L Y P+DMWS+GCI AE++ PLF G +E +QL I +++G
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
Query: 286 CPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCF 345
PP++ PR ++ +G G + + SV+ +++ + +
Sbjct: 237 LPPED---------------DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEML 281
Query: 346 NWDSKKRLTPDEALRHEWL 364
++ KR++ AL+H +L
Sbjct: 282 TFNPHKRISAFRALQHSYL 300
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 159/351 (45%), Gaps = 71/351 (20%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RYE + IG G++G V +A D + ++ L + ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGH-------------------------FVALKSVRV 39
Query: 82 -HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFR 140
+GEE L + VR + LR+ +A NV+ +++
Sbjct: 40 PNGEEGLP---------------------ISTVREVALLRRLEAFEHPNVVRLMDVCATS 78
Query: 141 N-----HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDL 195
+ + FE ++ +L + + G I+ ++ L LH I+H DL
Sbjct: 79 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 138
Query: 196 KPENVLLKQRGSSSIKVIDFG-SSCYSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWS 253
KPEN+L+ G+ +K+ DFG + YS+Q ++ + + +YR+PEV+L Y P+DMWS
Sbjct: 139 KPENILVTSGGT--VKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 254 LGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITN 313
+GCI AE++ PLF G +E +QL I +++G PP++ PR ++
Sbjct: 197 VGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED---------------DWPRDVSL 241
Query: 314 SKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+G G + + SV+ +++ + + ++ KR++ AL+H +L
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 166/364 (45%), Gaps = 70/364 (19%)
Query: 11 AFQVLHDHICYRYEILEVIGKGSFGQVIRALDHKTNTH-ALKYYGNQLTEFERTEIEKYL 69
+F V D + YEI+E IG G++G V A T A+K N
Sbjct: 46 SFDVTFD-VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN-------------- 90
Query: 70 EIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYN 129
FD N KR L E++IL H + + + +
Sbjct: 91 ----------------------AFDVVT---NAKR----TLRELKILKHFKHDNIIAIKD 121
Query: 130 VIH-MLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
++ + Y F++ + + +LM +L+++I ++ Q +L +R F + L++ L+ +H
Sbjct: 122 ILRPTVPYGEFKS-VYVVLDLMESDLHQII--HSSQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFG------SSCYSHQRVYT-YIQSRFYRSPEVIL 241
+IH DLKP N+L+ + + +K+ DFG +S HQ T Y+ +R+YR+PE++L
Sbjct: 179 QVIHRDLKPSNLLVNE--NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 242 GL-PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRL 300
L Y ID+WS+GCI E+ LFPG+N V QL IM +LG P VI R+
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 296
Query: 301 FFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALR 360
+ P R+P + +V D+ + + + ++ R++ ALR
Sbjct: 297 RAYIQSLP---------PRQPVPWE--TVYPGADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 361 HEWL 364
H +L
Sbjct: 346 HPFL 349
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++D+G + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDYGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 135/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
++ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K
Sbjct: 67 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CAK 117
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 175
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 176 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 235
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 236 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 284
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS KR+T +AL H +
Sbjct: 285 LVLDSDKRITAAQALAHAY 303
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 138/286 (48%), Gaps = 42/286 (14%)
Query: 100 YNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
++K F + L E++IL H + ++ + +N I + F N + I ELM +L+ +I
Sbjct: 47 FDKPLFALRTLREIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVI- 104
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
+ Q S I+ F + ++ +++LH N+IH DLKP N+L+ + +KV DFG
Sbjct: 105 --STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN--SNCDLKVCDFGLAR 160
Query: 217 ---------SSCYSHQR-VYTYIQSRFYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGC 265
S Q + ++ +R+YR+PEV+L Y +D+WS GCILAEL+
Sbjct: 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
Query: 266 PLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRK------R 319
P+FPG + QL I I+G P S RCI + + R+
Sbjct: 221 PIFPGRDYRHQLLLIFGIIGTP---------------HSDNDLRCIESPRAREYIKSLPM 265
Query: 320 KPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
P + R N K +D + + +D KR+T EAL H +L+
Sbjct: 266 YPAAPLEKMFPRVNPKG-IDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 160/349 (45%), Gaps = 68/349 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+YE L ++G+GS+G V++ + T I+K+LE
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTG--------------RIVAIKKFLE----------- 60
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
S + K A+ E+++L LR + N++++LE +
Sbjct: 61 -----------------SDDDKMVKKIAMREIKLLKQLRHE------NLVNLLEVCKKKK 97
Query: 142 HLCISFELMN---LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPE 198
+ FE ++ L+ EL G +++++ F ++ + H NIIH D+KPE
Sbjct: 98 RWYLVFEFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPE 153
Query: 199 NVLLKQRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFYRSPEVILG-LPYGPPIDMWSLGC 256
N+L+ Q G + F + + VY + +R+YR+PE+++G + YG +D+W++GC
Sbjct: 154 NILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGC 213
Query: 257 ILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKG 316
++ E++ G PLFPG+++++QL IM LG N R + F+ + +
Sbjct: 214 LVTEMFMGEPLFPGDSDIDQLYHIMMCLG-------NLIPRHQELFNKNPVFAGVRLPEI 266
Query: 317 RKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
++R+P + + + +D +C + D KR E L H++ +
Sbjct: 267 KEREPLERRYPKL----SEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 157/351 (44%), Gaps = 71/351 (20%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RYE + IG G++G V +A D + ++ L + ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGH-------------------------FVALKSVRV 39
Query: 82 -HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFR 140
+GEE L + VR + LR+ +A NV+ +++
Sbjct: 40 PNGEEGLP---------------------ISTVREVALLRRLEAFEHPNVVRLMDVCATS 78
Query: 141 N-----HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDL 195
+ + FE ++ +L + + G I+ ++ L LH I+H DL
Sbjct: 79 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 138
Query: 196 KPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYT-YIQSRFYRSPEVILGLPYGPPIDMWS 253
KPEN+L+ G+ +K+ DFG + YS+Q + + +YR+PEV+L Y P+DMWS
Sbjct: 139 KPENILVTSGGT--VKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 254 LGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITN 313
+GCI AE++ PLF G +E +QL I +++G PP++ PR ++
Sbjct: 197 VGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED---------------DWPRDVSL 241
Query: 314 SKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+G G + + SV+ +++ + + ++ KR++ AL+H +L
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 91 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 141
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 199
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 200 XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 259
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
G P E++ S + R S + K + A+V + VD + +
Sbjct: 260 GTPGAELLKKISSE--------SARNYIQSLAQMPK---MNFANVFIGANPLAVDLLEKM 308
Query: 345 FNWDSKKRLTPDEALRHEW 363
DS KR+T +AL H +
Sbjct: 309 LVLDSDKRITAAQALAHAY 327
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 137/286 (47%), Gaps = 42/286 (14%)
Query: 100 YNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
++K F + L E++IL H + ++ + +N I + F N + I ELM +L+ +I
Sbjct: 47 FDKPLFALRTLREIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVI- 104
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
+ Q S I+ F + ++ +++LH N+IH DLKP N+L+ + +KV DFG
Sbjct: 105 --STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN--SNCDLKVCDFGLAR 160
Query: 217 ---------SSCYSHQRVYT-YIQSRFYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGC 265
S Q T + +R+YR+PEV+L Y +D+WS GCILAEL+
Sbjct: 161 IIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
Query: 266 PLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRK------R 319
P+FPG + QL I I+G P S RCI + + R+
Sbjct: 221 PIFPGRDYRHQLLLIFGIIGTP---------------HSDNDLRCIESPRAREYIKSLPM 265
Query: 320 KPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
P + R N K +D + + +D KR+T EAL H +L+
Sbjct: 266 YPAAPLEKMFPRVNPKG-IDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 157/351 (44%), Gaps = 71/351 (20%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RYE + IG G++G V +A D + ++ L + ++
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGH-------------------------FVALKSVRV 39
Query: 82 -HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFR 140
+GEE L + VR + LR+ +A NV+ +++
Sbjct: 40 PNGEEGLP---------------------ISTVREVALLRRLEAFEHPNVVRLMDVCATS 78
Query: 141 N-----HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDL 195
+ + FE ++ +L + + G I+ ++ L LH I+H DL
Sbjct: 79 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDL 138
Query: 196 KPENVLLKQRGSSSIKVIDFG-SSCYSHQRVY-TYIQSRFYRSPEVILGLPYGPPIDMWS 253
KPEN+L+ G+ +K+ DFG + YS+Q + + +YR+PEV+L Y P+DMWS
Sbjct: 139 KPENILVTSGGT--VKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 254 LGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITN 313
+GCI AE++ PLF G +E +QL I +++G PP++ PR ++
Sbjct: 197 VGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED---------------DWPRDVSL 241
Query: 314 SKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+G G + + SV+ +++ + + ++ KR++ AL+H +L
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 134/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++ FG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILGFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 147/327 (44%), Gaps = 68/327 (20%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYN--VIHMLEYFYFRN----HLCISFELMNLNL 154
+ + + AL E+++L +R+ D V+ +++ F H+C+ FE++ +L
Sbjct: 66 SAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHL 125
Query: 155 YELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHCDLKPENVLL----------- 202
+ I ++NYQG + ++ ++Q L LH + IIH D+KPEN+L+
Sbjct: 126 LKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMA 185
Query: 203 ------KQRGSSS----------------------------IKVIDFGSSCYSHQRVYTY 228
++ G+ +K+ D G++C+ H+
Sbjct: 186 AEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTED 245
Query: 229 IQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF---PGEN---EVEQLACIME 282
IQ+R YRS EV++G Y P D+WS C+ EL TG LF GE+ + + +A I+E
Sbjct: 246 IQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIE 305
Query: 283 ILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCN----DKA-F 337
+LG P + R FF+ +G R IT K KP S V + D A F
Sbjct: 306 LLGSIPRHFALSGKYSREFFNRRGELRHIT-----KLKPWSLFDVLVEKYGWPHEDAAQF 360
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
DF+ +KR + E LRH WL
Sbjct: 361 TDFLIPMLEMVPEKRASAGECLRHPWL 387
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 134/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++D G + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDAGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 134/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DFG + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 134/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++D G + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDGGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 134/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++D G + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDRGLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 49/289 (16%)
Query: 96 ENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHL------CISFEL 149
+N ++ K+ + + L+ +++++H N+I +L F + L I EL
Sbjct: 62 QNQTHAKRAY--RELVLMKVVNH---------KNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 150 MNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSS 208
M+ NL ++I+ +++ S L + ++ ++ LH IIH DLKP N+++K +
Sbjct: 111 MDANLSQVIQMELDHERMSYLL-----YQMLVGIKHLHSAGIIHRDLKPSNIVVK--SDA 163
Query: 209 SIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
++K++DFG + + + Y+ +R+YR+PEVILG+ Y +D+WS+GCI+ E+ G
Sbjct: 164 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
Query: 267 LFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPG---S 323
LFPG + ++Q ++E LG P E F K P T + R + G
Sbjct: 224 LFPGTDHIDQWNKVIEQLGTPSPE-----------FMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 324 KDMASVL--------RCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
K VL + D +++ D+ KR++ DEAL+H ++
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 134/262 (51%), Gaps = 35/262 (13%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFR------NHLCISFELMNLNLYELIKRNNYQG 165
E+R+L H++ + NVI +L+ F N + + LM +L ++K Q
Sbjct: 71 ELRLLKHMKHE------NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQK 121
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
+ ++ + +++ L+ +H +IIH DLKP N+ + + +K++DF + ++ +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFYLARHTDDEM 179
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y+ +R+YR+PE++L + Y +D+WS+GCI+AEL TG LFPG + ++QL I+ ++
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 285 GCPPDEV---INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
G P E+ I++ S R P+ + A+V + VD +
Sbjct: 240 GTPGAELLKKISSESARNYIQSLTQMPKM--------------NFANVFIGANPLAVDLL 285
Query: 342 TQCFNWDSKKRLTPDEALRHEW 363
+ DS KR+T +AL H +
Sbjct: 286 EKMLVLDSDKRITAAQALAHAY 307
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 138/268 (51%), Gaps = 38/268 (14%)
Query: 109 ALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSL 168
AL E+R+L L+ N++++LE F + L + FE + + + R +G
Sbjct: 49 ALREIRMLKQLKHP------NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPE 101
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-------SSCYS 221
L++ + +Q + H+ N IH D+KPEN+L+ + S IK+ DFG S Y
Sbjct: 102 HLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKH--SVIKLCDFGFARLLTGPSDYY 159
Query: 222 HQRVYTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
V T R+YRSPE+++G YGPP+D+W++GC+ AEL +G PL+PG+++V+QL I
Sbjct: 160 DDEVAT----RWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI 215
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASV-LRCNDKAF-- 337
+ LG + R + F + + + P +DM + L+ + ++
Sbjct: 216 RKTLG-------DLIPRHQQVFSTNQYFSGV-------KIPDPEDMEPLELKFPNISYPA 261
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + C + D +RLT ++ L H + +
Sbjct: 262 LGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 53/291 (18%)
Query: 96 ENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHL------CISFEL 149
+N ++ K+ + + L+ +++++H N+I +L F + L I EL
Sbjct: 62 QNQTHAKRAY--RELVLMKVVNH---------KNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 150 MNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCL---RLLHRENIIHCDLKPENVLLKQRG 206
M+ NL ++I+ R ++ L Q L + LH IIH DLKP N+++K
Sbjct: 111 MDANLSQVIQMELDH-------ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--S 161
Query: 207 SSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+++K++DFG + + + Y+ +R+YR+PEVILG+ Y +D+WS+GCI+ E+ G
Sbjct: 162 DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
Query: 265 CPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPG-- 322
LFPG + ++Q ++E LG P E F K P T + R + G
Sbjct: 222 GVLFPGTDHIDQWNKVIEQLGTPSPE-----------FMKKLQPTVRTYVENRPKYAGYS 270
Query: 323 -SKDMASVL--------RCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
K VL + D +++ D+ KR++ DEAL+H ++
Sbjct: 271 FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K +++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ G LFPG + ++Q ++E LG P E
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE--------- 247
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 248 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL-----YQMLVG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K +++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+G I+ E+ G LFPG + ++Q ++E LG P E
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE--------- 247
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 248 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 157/348 (45%), Gaps = 69/348 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+Y LE IG+G++G V +A ++ T ALK + +EK E G+ + I
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALK----------KIRLEKEDE----GIPSTTI 48
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
E+ IL L+ + Y+VIH +
Sbjct: 49 R-----------------------------EISILKELKHSNIVKLYDVIHT------KK 73
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L + FE ++ +L +L+ G + F L+ + H ++H DLKP+N+L
Sbjct: 74 RLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL 132
Query: 202 LKQRGSSSIKVIDFG--SSCYSHQRVYTY-IQSRFYRSPEVILG-LPYGPPIDMWSLGCI 257
+ + G +K+ DFG + R YT+ I + +YR+P+V++G Y ID+WS+GCI
Sbjct: 133 INREGE--LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 258 LAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR 317
AE+ G PLFPG +E +QL I ILG P + N + L P+ N
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK--NWPNVTEL-------PKYDPNFTVY 241
Query: 318 KRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ P S L+ D++ +D +++ D +R+T +AL H + K
Sbjct: 242 EPLP----WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 156/358 (43%), Gaps = 77/358 (21%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+YE L IG+G+FG+V +A KT K+
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQ--------------------------------KV 46
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLE------ 135
++ L +N K+ F AL E++IL L+ + NV++++E
Sbjct: 47 ALKKVLMEN----------EKEGFPITALREIKILQLLKHE------NVVNLIEICRTKA 90
Query: 136 --YFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHC 193
Y + + + F+ +L L+ N F+L I+R L+ L +HR I+H
Sbjct: 91 SPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHR 149
Query: 194 DLKPENVLLKQRGSSSIKVIDFG-------SSCYSHQRVYTYIQSRFYRSPEVILG-LPY 245
D+K NVL+ + G +K+ DFG + R + + +YR PE++LG Y
Sbjct: 150 DMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 207
Query: 246 GPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSK 305
GPPID+W GCI+AE++T P+ G E QLA I ++ G EV L+
Sbjct: 208 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY---- 263
Query: 306 GTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
+ KG+KRK + A V D +D + + D +R+ D+AL H++
Sbjct: 264 ---EKLELVKGQKRKVKDRLKAYV---RDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 144/289 (49%), Gaps = 49/289 (16%)
Query: 96 ENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHL------CISFEL 149
+N ++ K+ + + L+ +++++H N+I +L F + L I EL
Sbjct: 62 QNQTHAKRAY--RELVLMKVVNH---------KNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 150 MNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSS 208
M+ NL ++I+ +++ S L + ++ ++ LH IIH DLKP N+++K +
Sbjct: 111 MDANLSQVIQMELDHERMSYLL-----YQMLVGIKHLHSAGIIHRDLKPSNIVVK--SDA 163
Query: 209 SIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
++K++DFG + + + Y+ +R+YR+PEVILG+ Y +D+WS+G I+ E+ G
Sbjct: 164 TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGV 223
Query: 267 LFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPG---S 323
LFPG + ++Q ++E LG P E F K P T + R + G
Sbjct: 224 LFPGTDHIDQWNKVIEQLGTPSPE-----------FMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 324 KDMASVL--------RCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
K VL + D +++ D+ KR++ DEAL+H ++
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 156/358 (43%), Gaps = 77/358 (21%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+YE L IG+G+FG+V +A KT K+
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQ--------------------------------KV 46
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLE------ 135
++ L +N K+ F AL E++IL L+ + NV++++E
Sbjct: 47 ALKKVLMEN----------EKEGFPITALREIKILQLLKHE------NVVNLIEICRTKA 90
Query: 136 --YFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHC 193
Y + + + F+ +L L+ N F+L I+R L+ L +HR I+H
Sbjct: 91 SPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHR 149
Query: 194 DLKPENVLLKQRGSSSIKVIDFG-------SSCYSHQRVYTYIQSRFYRSPEVILG-LPY 245
D+K NVL+ + G +K+ DFG + R + + +YR PE++LG Y
Sbjct: 150 DMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 207
Query: 246 GPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSK 305
GPPID+W GCI+AE++T P+ G E QLA I ++ G EV L+
Sbjct: 208 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY---- 263
Query: 306 GTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
+ KG+KRK + A V D +D + + D +R+ D+AL H++
Sbjct: 264 ---EKLELVKGQKRKVKDRLKAYV---RDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 134/274 (48%), Gaps = 40/274 (14%)
Query: 100 YNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF--------YFRNHLCISFELMN 151
+ + F +A E+ +L H++ + NVI +L+ F ++ +L + F M
Sbjct: 79 FQSEIFAKRAYRELLLLKHMQHE------NVIGLLDVFTPASSLRNFYDFYLVMPF--MQ 130
Query: 152 LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIK 211
+L +++ FS I+ + +++ L+ +H ++H DLKP N+ + + +K
Sbjct: 131 TDLQKIMGME----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE--DCELK 184
Query: 212 VIDFGSSCYSHQRVYTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPG 270
++DFG + ++ + Y+ +R+YR+PEVIL + Y +D+WS+GCI+AE+ TG LF G
Sbjct: 185 ILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244
Query: 271 ENEVEQLACIMEILGCPPDEVI---NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMA 327
++ ++QL I+++ G P E + N + + TPR KD
Sbjct: 245 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR--------------KDFT 290
Query: 328 SVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
+ D + + D KRLT +AL H
Sbjct: 291 QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 69/348 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+Y LE IG+G++G V +A ++ T ALK + +EK E G+ + I
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALK----------KIRLEKEDE----GIPSTTI 48
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
E+ IL L+ + Y+VIH +
Sbjct: 49 R-----------------------------EISILKELKHSNIVKLYDVIHT------KK 73
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L + FE ++ +L +L+ G + F L+ + H ++H DLKP+N+L
Sbjct: 74 RLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL 132
Query: 202 LKQRGSSSIKVIDFG--SSCYSHQRVYTY-IQSRFYRSPEVILG-LPYGPPIDMWSLGCI 257
+ + G +K+ DFG + R YT+ + + +YR+P+V++G Y ID+WS+GCI
Sbjct: 133 INREGE--LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 258 LAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR 317
AE+ G PLFPG +E +QL I ILG P + N + L P+ N
Sbjct: 191 FAEMVNGAPLFPGVSEADQLMRIFRILGTPNSK--NWPNVTEL-------PKYDPNFTVY 241
Query: 318 KRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ P S L+ D++ +D +++ D +R+T +AL H + K
Sbjct: 242 EPLP----WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 156/358 (43%), Gaps = 77/358 (21%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+YE L IG+G+FG+V +A KT K+
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQ--------------------------------KV 45
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLE------ 135
++ L +N K+ F AL E++IL L+ + NV++++E
Sbjct: 46 ALKKVLMEN----------EKEGFPITALREIKILQLLKHE------NVVNLIEICRTKA 89
Query: 136 --YFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHC 193
Y + + + F+ +L L+ N F+L I+R L+ L +HR I+H
Sbjct: 90 SPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHR 148
Query: 194 DLKPENVLLKQRGSSSIKVIDFG-------SSCYSHQRVYTYIQSRFYRSPEVILG-LPY 245
D+K NVL+ + G +K+ DFG + R + + +YR PE++LG Y
Sbjct: 149 DMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 206
Query: 246 GPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSK 305
GPPID+W GCI+AE++T P+ G E QLA I ++ G EV L+
Sbjct: 207 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY---- 262
Query: 306 GTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
+ KG+KRK + A V D +D + + D +R+ D+AL H++
Sbjct: 263 ---EKLELVKGQKRKVKDRLKAYV---RDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 69/348 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+Y LE IG+G++G V +A ++ T ALK + +EK E G+ + I
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALK----------KIRLEKEDE----GIPSTTI 48
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
E+ IL L+ + Y+VIH +
Sbjct: 49 R-----------------------------EISILKELKHSNIVKLYDVIHT------KK 73
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L + FE ++ +L +L+ G + F L+ + H ++H DLKP+N+L
Sbjct: 74 RLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLL 132
Query: 202 LKQRGSSSIKVIDFG--SSCYSHQRVYTY-IQSRFYRSPEVILG-LPYGPPIDMWSLGCI 257
+ + G +K+ DFG + R YT+ + + +YR+P+V++G Y ID+WS+GCI
Sbjct: 133 INREGE--LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 258 LAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR 317
AE+ G PLFPG +E +QL I ILG P + N + L P+ N
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK--NWPNVTEL-------PKYDPNFTVY 241
Query: 318 KRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ P S L+ D++ +D +++ D +R+T +AL H + K
Sbjct: 242 EPLP----WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 156/358 (43%), Gaps = 77/358 (21%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+YE L IG+G+FG+V +A KT K+
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQ--------------------------------KV 46
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLE------ 135
++ L +N K+ F AL E++IL L+ + NV++++E
Sbjct: 47 ALKKVLMEN----------EKEGFPITALREIKILQLLKHE------NVVNLIEICRTKA 90
Query: 136 --YFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHC 193
Y + + + F+ +L L+ N F+L I+R L+ L +HR I+H
Sbjct: 91 SPYNRCKASIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHR 149
Query: 194 DLKPENVLLKQRGSSSIKVIDFG-------SSCYSHQRVYTYIQSRFYRSPEVILG-LPY 245
D+K NVL+ + G +K+ DFG + R + + +YR PE++LG Y
Sbjct: 150 DMKAANVLITRDGV--LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDY 207
Query: 246 GPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSK 305
GPPID+W GCI+AE++T P+ G E QLA I ++ G EV L+
Sbjct: 208 GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY---- 263
Query: 306 GTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
+ KG+KRK + A V D +D + + D +R+ D+AL H++
Sbjct: 264 ---EKLELVKGQKRKVKDRLKAYV---RDPYALDLIDKLLVLDPAQRIDSDDALNHDF 315
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 134/274 (48%), Gaps = 40/274 (14%)
Query: 100 YNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF--------YFRNHLCISFELMN 151
+ + F +A E+ +L H++ + NVI +L+ F ++ +L + F M
Sbjct: 61 FQSEIFAKRAYRELLLLKHMQHE------NVIGLLDVFTPASSLRNFYDFYLVMPF--MQ 112
Query: 152 LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIK 211
+L +++ FS I+ + +++ L+ +H ++H DLKP N+ + + +K
Sbjct: 113 TDLQKIMGLK----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE--DCELK 166
Query: 212 VIDFGSSCYSHQRVYTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPG 270
++DFG + ++ + Y+ +R+YR+PEVIL + Y +D+WS+GCI+AE+ TG LF G
Sbjct: 167 ILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226
Query: 271 ENEVEQLACIMEILGCPPDEVI---NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMA 327
++ ++QL I+++ G P E + N + + TPR KD
Sbjct: 227 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR--------------KDFT 272
Query: 328 SVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
+ D + + D KRLT +AL H
Sbjct: 273 QLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ G LFPG + ++Q ++E LG P E
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE--------- 247
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 248 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 140/282 (49%), Gaps = 42/282 (14%)
Query: 100 YNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
+ + + + L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 63 FEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 121
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 122 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLAR 176
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 237 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 280
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 281 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ G LFPG + ++Q ++E LG P E
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE--------- 247
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 248 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 155/348 (44%), Gaps = 80/348 (22%)
Query: 27 EVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIHGEES 86
+VIG GSFG V +A +L E + I+K L+
Sbjct: 46 KVIGNGSFGVVFQA---------------KLVESDEVAIKKVLQ---------------- 74
Query: 87 LSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNH---- 142
KRF ++ L +RI+ H NV+ + +FY
Sbjct: 75 ---------------DKRFKNRELQIMRIVKH---------PNVVDLKAFFYSNGDKKDE 110
Query: 143 --LCISFELMNLNLYELIKR--NNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPE 198
L + E + +Y + Q + LI+ + + L++ L +H I H D+KP+
Sbjct: 111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQ 170
Query: 199 NVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLG 255
N+LL S +K+IDFGS+ + + + I SR+YR+PE+I G Y ID+WS G
Sbjct: 171 NLLLDP-PSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTG 229
Query: 256 CILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSK 315
C++AEL G PLFPGE+ ++QL I+++LG P E I T + + + K P+ +
Sbjct: 230 CVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPN--YMEHK-FPQIRPHPF 286
Query: 316 GRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
+ +P + A +D +++ + RLT EAL H +
Sbjct: 287 SKVFRPRTPPDA----------IDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 128/257 (49%), Gaps = 40/257 (15%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I +++ S L + ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPE 238
++ LH IIH DLKP N+++K ++K++DFG ++C ++ + Y+ +R+YR+PE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAC-TNFMMTPYVVTRYYRAPE 195
Query: 239 VILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRR 298
VILG+ Y +D+WS+GCI+ EL GC +F G + ++Q ++E LG P E
Sbjct: 196 VILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAE-------- 247
Query: 299 RLFFDSKGTPRCITNSKGRKRKPGSK-----------DMASVLRCNDKAFVDFVTQCFNW 347
F + P + R + PG K + + D +++
Sbjct: 248 ---FMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 348 DSKKRLTPDEALRHEWL 364
D KR++ DEALRH ++
Sbjct: 305 DPDKRISVDEALRHPYI 321
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 87/361 (24%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFE-RTEIEKYLEIWYLGLDACK 80
RY L IG+G++G V A D N + ++ +++ FE +T ++ L + L
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYD---NVNKVRVAIKKISPFEHQTYCQRTLREIKILL---- 96
Query: 81 IHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFR 140
RF H+ +I + D +R I ++ Y
Sbjct: 97 -----------------------RFRHENIIGIN--DIIRAP-------TIEQMKDVYLV 124
Query: 141 NHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
HL M +LY+L+K Q S I F + +++ L+ +H N++H DLKP N+
Sbjct: 125 THL------MGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 175
Query: 201 LLKQRGSSSIKVIDFG-----SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWS 253
LL + +K+ DFG + H T Y+ +R+YR+PE++L Y ID+WS
Sbjct: 176 LLNT--TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 233
Query: 254 LGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITN 313
+GCILAE+ + P+FPG++ ++QL I+ ILG P E +N CI N
Sbjct: 234 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN----------------CIIN 277
Query: 314 SKGR---------KRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
K R + P ++ + D +D + + ++ KR+ ++AL H +L
Sbjct: 278 LKARNYLLSLPHKNKVPWNRLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333
Query: 365 K 365
+
Sbjct: 334 E 334
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 63 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 121
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 122 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLAR 176
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 237 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 280
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 281 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 117
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 118 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLAR 172
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 233 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 276
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 277 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 160/358 (44%), Gaps = 55/358 (15%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTH-ALKY------YGNQLTEFERTEIEKYLEIWYL 74
+Y + + +G GSFG V D ++ ALK Y N+ E + ++ ++ I L
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR--ELDIMKVLDHVNIIKL 65
Query: 75 GLDACKIHGEESLSQNGGFDDEN---GSYNKKRFHHQALIEVRILDHLRKKDADSSYNVI 131
+D G+E DD N G N HH+++I + S N
Sbjct: 66 -VDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVI------------VNPSQN-- 110
Query: 132 HMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFS--LGLIRRFAFSLVQCLRLLHREN 189
+L + E + L++++K G S + LI + + L + + +H
Sbjct: 111 ---------KYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG 161
Query: 190 IIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRFYRSPEVILGLP-YG 246
I H D+KP+N+L+ + +++K+ DFGS+ + I SRFYR+PE++LG Y
Sbjct: 162 ICHRDIKPQNLLVNSK-DNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYT 220
Query: 247 PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKG 306
P ID+WS+GC+ EL G PLF GE ++QL I++I+G P E + R +
Sbjct: 221 PSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM---IRMNPHYTEVR 277
Query: 307 TPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
P + G+ +A +D + Q ++ R+ P EA+ H +
Sbjct: 278 FPTLKAKDWRKILPEGTPSLA----------IDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 67 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 125
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 126 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 180
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 181 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 241 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 284
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 285 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 117
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 118 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 172
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 233 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 276
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 277 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 64 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 122
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 123 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 177
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 178 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 238 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 281
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 282 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 65 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 123
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 124 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 178
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 179 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 239 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 282
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 283 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 56 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 114
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 115 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 169
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 170 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 230 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 273
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 274 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 63 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 121
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 122 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 176
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 237 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 280
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 281 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 57 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 115
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 116 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 170
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 231 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 274
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 275 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 63 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 121
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 122 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 176
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 237 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 280
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 281 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 57 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 115
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 116 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 170
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 231 YLDQLNHILGILGSPEQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 274
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 275 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 79 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 137
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 138 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 192
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 253 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 296
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 297 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 117
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 118 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 172
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 233 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 276
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 277 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 61 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 119
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 120 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 174
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 235 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 278
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 279 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 316
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ G LFPG + ++Q ++E LG P E
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE--------- 247
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 248 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 139
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ G LFPG + ++Q ++E LG P E
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE--------- 248
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 249 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 307 ASKRISVDEALQHPYI 322
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 37/277 (13%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 117
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 118 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKIXDFGLAR 172
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 273 EVEQLACIMEILGCPPDE----VINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMAS 328
++QL I+ ILG P E +IN +R L + + + P ++ +
Sbjct: 233 YLDQLNHILGILGSPSQEDLNXIINLKARNYLL-----------SLPHKNKVPWNRLFPN 281
Query: 329 VLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
D +D + + ++ KR+ ++AL H +L+
Sbjct: 282 A----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 164/379 (43%), Gaps = 84/379 (22%)
Query: 18 HICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLD 77
H+ +YE+++ +GKG++G V +++D +T
Sbjct: 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTG------------------------------- 34
Query: 78 ACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF 137
E ++ FD S + +R + +I + H N++++L
Sbjct: 35 -------EVVAVKKIFDAFQNSTDAQRTFREIMILTELSGH---------ENIVNLLNVL 78
Query: 138 YFRNH--LCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDL 195
N + + F+ M +L+ +I+ N + + + L++ ++ LH ++H D+
Sbjct: 79 RADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKVIKYLHSGGLLHRDM 135
Query: 196 KPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYT-----------------------YIQS 231
KP N+LL +KV DFG S + + R T Y+ +
Sbjct: 136 KPSNILLN--AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVAT 193
Query: 232 RFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE 290
R+YR+PE++LG Y IDMWSLGCIL E+ G P+FPG + + QL I+ ++ P +E
Sbjct: 194 RWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNE 253
Query: 291 VINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKA-----FVDFVTQCF 345
+ + + + + KR +K +L+ N KA +D + +
Sbjct: 254 DVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313
Query: 346 NWDSKKRLTPDEALRHEWL 364
++ KR++ ++AL+H ++
Sbjct: 314 QFNPNKRISANDALKHPFV 332
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 47/281 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 61 FEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 119
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 120 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 174
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 235 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 278
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + D +D + + ++ KR+ ++AL H +L
Sbjct: 279 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 140/277 (50%), Gaps = 37/277 (13%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 59 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 117
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 118 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TXDLKICDFGLAR 172
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 273 EVEQLACIMEILGCPPDE----VINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMAS 328
++QL I+ ILG P E +IN +R L + + + P ++ +
Sbjct: 233 YLDQLNHILGILGSPSQEDLNXIINLKARNYLL-----------SLPHKNKVPWNRLFPN 281
Query: 329 VLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
D +D + + ++ KR+ ++AL H +L+
Sbjct: 282 A----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 130/260 (50%), Gaps = 31/260 (11%)
Query: 109 ALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSL 168
A+ EV +L L+ + + +++IH L + FE ++ +L + + + ++
Sbjct: 47 AIREVSLLKDLKHANIVTLHDIIHT------EKSLTLVFEYLDKDLKQYLD-DCGNIINM 99
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY 228
++ F F L++ L HR+ ++H DLKP+N+L+ +RG +K+ DFG + TY
Sbjct: 100 HNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE--LKLADFGLARAKSIPTKTY 157
Query: 229 ---IQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
+ + +YR P+++LG Y IDMW +GCI E+ TG PLFPG EQL I IL
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRK---RKPGSKDMASVLRCNDKAFVDFV 341
G P +E P ++N + + K ++ + S D D +
Sbjct: 218 GTPTEETW---------------PGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLL 262
Query: 342 TQCFNWDSKKRLTPDEALRH 361
T+ ++ + R++ ++A++H
Sbjct: 263 TKLLQFEGRNRISAEDAMKH 282
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 139/282 (49%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 63 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 121
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG
Sbjct: 122 ---CQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 176
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 237 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 280
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 281 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 47/281 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 61 FEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 119
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--- 216
Q S I F + +++ L+ +H N++H DLKP N+LL +S +K+ DFG
Sbjct: 120 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TSDLKICDFGLAR 174
Query: 217 --SSCYSHQRVYT-YIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ H T Y+ +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N C N K R + P +
Sbjct: 235 YLDQLNHILGILGSPSQEDLN----------------CGINLKARNYLLSLPHKNKVPWN 278
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ + D +D + + ++ KR+ ++AL H +L
Sbjct: 279 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 140
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + ++ +R+YR+PEV
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ G LFPG + ++Q ++E LG P E
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE--------- 249
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 250 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 307
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 308 ASKRISVDEALQHPYI 323
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 154/353 (43%), Gaps = 79/353 (22%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+YE LE IG+G++G V +A + +T+ ++ +R ++
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETH---------EIVALKRVRLD--------------- 38
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
DD+ G AL E+ +L L+ K N++ + + +
Sbjct: 39 ------------DDDEG------VPSSALREICLLKELKHK------NIVRLHDVLHSDK 74
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L + FE + +L + N +++ F F L++ L H N++H DLKP+N+L
Sbjct: 75 KLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133
Query: 202 LKQRGSSSIKVIDFGSS--------CYSHQRVYTYIQSRFYRSPEVILGLP-YGPPIDMW 252
+ + G +K+ DFG + CYS + V + +YR P+V+ G Y IDMW
Sbjct: 134 INRNG--ELKLADFGLARAFGIPVRCYSAEVV-----TLWYRPPDVLFGAKLYSTSIDMW 186
Query: 253 SLGCILAELYTGC-PLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCI 311
S GCI AEL PLFPG + +QL I +LG P +E + ++ +
Sbjct: 187 SAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK-------------L 233
Query: 312 TNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ K P + + +V+ + D + + +R++ +EAL+H +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 127/256 (49%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + + +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ G LFPG + ++Q ++E LG P E
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE--------- 247
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVLRCND--------KAFVDFVTQCFNWD 348
F K P T + R + G K VL D D +++ D
Sbjct: 248 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVID 305
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 107
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 108 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278
Query: 290 EVI 292
E I
Sbjct: 279 EQI 281
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 63 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 121
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC 219
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG +
Sbjct: 122 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 176
Query: 220 YSHQR------VYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ + + +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 177 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 237 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 280
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 281 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 47/282 (16%)
Query: 105 FHHQA-----LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIK 159
F HQ L E++IL R ++ ++I ++ + I +LM +LY+L+K
Sbjct: 64 FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD-VYIVQDLMETDLYKLLK 122
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC 219
Q S I F + +++ L+ +H N++H DLKP N+LL + +K+ DFG +
Sbjct: 123 T---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--TCDLKICDFGLAR 177
Query: 220 YSHQR------VYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGEN 272
+ + + +R+YR+PE++L Y ID+WS+GCILAE+ + P+FPG++
Sbjct: 178 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 273 EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR---------KRKPGS 323
++QL I+ ILG P E +N CI N K R + P +
Sbjct: 238 YLDQLNHILGILGSPSQEDLN----------------CIINLKARNYLLSLPHKNKVPWN 281
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + D +D + + ++ KR+ ++AL H +L+
Sbjct: 282 RLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 43 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 101
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 102 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 153
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 154 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 212
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 272
Query: 290 EVI 292
E I
Sbjct: 273 EQI 275
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 161/358 (44%), Gaps = 88/358 (24%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+Y+ LE +G+G++G V +A D + ALK + LDA
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKR---------------------IRLDA--- 57
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
+DE A+ E+ +L L N++ +++ +
Sbjct: 58 ------------EDEG-------IPSTAIREISLLKELHHP------NIVSLIDVIHSER 92
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L + FE M +L +++ N G I+ + + L++ + H+ I+H DLKP+N+L
Sbjct: 93 CLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLL 151
Query: 202 LKQRGSSSIKVIDFGSS--------CYSHQRVYTYIQSRFYRSPEVILG-LPYGPPIDMW 252
+ G+ +K+ DFG + Y+H+ V + +YR+P+V++G Y +D+W
Sbjct: 152 INSDGA--LKLADFGLARAFGIPVRSYTHEVV-----TLWYRAPDVLMGSKKYSTSVDIW 204
Query: 253 SLGCILAELYTGCPLFPGENEVEQLACIMEILGCP-PDEVINTAS----RRRLFFDSKGT 307
S+GCI AE+ TG PLFPG + +QL I ILG P P E ++R F
Sbjct: 205 SIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF------ 258
Query: 308 PRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ ++KP S S++ + +D ++ +D KR++ +A+ H + K
Sbjct: 259 -------QVFEKKPWS----SIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 79/353 (22%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+YE LE IG+G++G V +A + +T+ ++ +R ++
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETH---------EIVALKRVRLD--------------- 38
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
DD+ G AL E+ +L L+ K N++ + + +
Sbjct: 39 ------------DDDEG------VPSSALREICLLKELKHK------NIVRLHDVLHSDK 74
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L + FE + +L + N +++ F F L++ L H N++H DLKP+N+L
Sbjct: 75 KLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLL 133
Query: 202 LKQRGSSSIKVIDFGSS--------CYSHQRVYTYIQSRFYRSPEVILGLP-YGPPIDMW 252
+ + G +K+ +FG + CYS + V + +YR P+V+ G Y IDMW
Sbjct: 134 INRNG--ELKLANFGLARAFGIPVRCYSAEVV-----TLWYRPPDVLFGAKLYSTSIDMW 186
Query: 253 SLGCILAELY-TGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCI 311
S GCI AEL G PLFPG + +QL I +LG P +E + ++ +
Sbjct: 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK-------------L 233
Query: 312 TNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ K P + + +V+ + D + + +R++ +EAL+H +
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 51 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 109
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 110 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 161
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 162 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 220
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 280
Query: 290 EVI 292
E I
Sbjct: 281 EQI 283
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 53 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 111
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 112 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 163
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 164 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 222
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 282
Query: 290 EVI 292
E I
Sbjct: 283 EQI 285
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 130/252 (51%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLL-----YQMLXG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCP-PDEVINTASRR 298
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P P+ +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 299 RLFFDSKGT------PRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + +++ P+ +S +K AS R D +++ D KR
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 309
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 161/358 (44%), Gaps = 88/358 (24%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+Y+ LE +G+G++G V +A D + ALK + LDA
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKR---------------------IRLDA--- 57
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
+DE A+ E+ +L L N++ +++ +
Sbjct: 58 ------------EDEG-------IPSTAIREISLLKELHHP------NIVSLIDVIHSER 92
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L + FE M +L +++ N G I+ + + L++ + H+ I+H DLKP+N+L
Sbjct: 93 CLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLL 151
Query: 202 LKQRGSSSIKVIDFGSS--------CYSHQRVYTYIQSRFYRSPEVILG-LPYGPPIDMW 252
+ G+ +K+ DFG + Y+H+ V + +YR+P+V++G Y +D+W
Sbjct: 152 INSDGA--LKLADFGLARAFGIPVRSYTHEVV-----TLWYRAPDVLMGSKKYSTSVDIW 204
Query: 253 SLGCILAELYTGCPLFPGENEVEQLACIMEILGCP-PDEVINTAS----RRRLFFDSKGT 307
S+GCI AE+ TG PLFPG + +QL I ILG P P E ++R F
Sbjct: 205 SIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF------ 258
Query: 308 PRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ ++KP S S++ + +D ++ +D KR++ +A+ H + K
Sbjct: 259 -------QVFEKKPWS----SIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 94 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 152
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 153 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 204
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 205 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 263
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 323
Query: 290 EVI 292
E I
Sbjct: 324 EQI 326
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 16/200 (8%)
Query: 170 LIRRFAFSLVQCLRLLHRE--NIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRV 225
LI+ F F L++ + LH N+ H D+KP NVL+ + ++K+ DFGS+ +
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE-ADGTLKLCDFGSAKKLSPSEPN 188
Query: 226 YTYIQSRFYRSPEVILG-LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
YI SR+YR+PE+I G Y +D+WS+GCI AE+ G P+F G+N QL I+ +L
Sbjct: 189 VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQC 344
GCP EV+ R+L + T + NSKG P S + + K D ++
Sbjct: 249 GCPSREVL-----RKL--NPSHTDVDLYNSKG---IPWSNVFSDHSLKDAKEAYDLLSAL 298
Query: 345 FNWDSKKRLTPDEALRHEWL 364
+ ++R+ P EAL H +
Sbjct: 299 LQYLPEERMKPYEALCHPYF 318
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 20 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 78
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 79 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 130
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 131 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 189
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 249
Query: 290 EVI 292
E I
Sbjct: 250 EQI 252
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 130/252 (51%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLL-----YQMLXG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCP-PDEVINTASRR 298
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P P+ +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 299 RLFFDSKGT------PRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + +++ P+ +S +K AS R D +++ D KR
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 309
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 28 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 86
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 87 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 138
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 139 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 197
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 257
Query: 290 EVI 292
E I
Sbjct: 258 EQI 260
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 130/252 (51%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLL-----YQMLXG 131
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCP-PDEVINTASRR 298
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P P+ +
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 299 RLFFDSKGT------PRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + +++ P+ +S +K AS R D +++ D KR
Sbjct: 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 302
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 303 ISVDDALQHPYI 314
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 73
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 74 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 290 EVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDS 349
E I + F P+ + + +P + A + ++ +
Sbjct: 245 EQIREMNPNYTEFK---FPQIKAHPWTKVFRPRTPPEA----------IALCSRLLEYTP 291
Query: 350 KKRLTPDEALRHEWL 364
RLTP EA H +
Sbjct: 292 TARLTPLEACAHSFF 306
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 132
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E
Sbjct: 191 ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE--------- 241
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 242 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 300 ASKRISVDEALQHPYI 315
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 155/333 (46%), Gaps = 39/333 (11%)
Query: 51 KYYGNQLTEFERTEIEKYLEIWYLGLDACKI---HGEESLSQNGGFDDENGSYNKKRFHH 107
++Y Q+ + T +++Y ++ +G A I + L N + + +
Sbjct: 7 QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAK 66
Query: 108 QALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRN-NYQGF 166
+A E+ +L + K+ S NV + + + ELM+ NL ++I +++
Sbjct: 67 RAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM 126
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQR 224
S L + ++ ++ LH IIH DLKP N+++K ++K++DFG + ++
Sbjct: 127 SYLL-----YQMLCGIKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTASTNFM 179
Query: 225 VYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
+ Y+ +R+YR+PEVILG+ Y +D+WS+GCI+ EL G +F G + ++Q ++E L
Sbjct: 180 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL 239
Query: 285 GCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPG-------------SKDMASVLR 331
G P E F + P + R PG S+ ++
Sbjct: 240 GTPSAE-----------FMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIK 288
Query: 332 CNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+ D +++ D KR++ DEALRH ++
Sbjct: 289 TSQAR--DLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 143
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 201
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E
Sbjct: 202 ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE--------- 252
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 253 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 310
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 311 ASKRISVDEALQHPYI 326
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 130/252 (51%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCP-PDEVINTASRR 298
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P P+ +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 299 RLFFDSKGT------PRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + +++ P+ +S +K AS R D +++ D KR
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 309
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 57/275 (20%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RY + +G+G++G+V +A+D TN + +R +E
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTN---------ETVAIKRIRLE--------------- 70
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
H EE + A+ EV +L L+ + N+I + + +
Sbjct: 71 HEEEGVPGT------------------AIREVSLLKELQHR------NIIELKSVIHHNH 106
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L + FE +L + + +N S+ +I+ F + L+ + H +H DLKP+N+L
Sbjct: 107 RLHLIFEYAENDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLL 164
Query: 202 LKQRGSSSIKVIDFGSSCYSHQ-----RVYTY-IQSRFYRSPEVILGLP-YGPPIDMWSL 254
L +S V+ G + R +T+ I + +YR PE++LG Y +D+WS+
Sbjct: 165 LSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSI 224
Query: 255 GCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
CI AE+ PLFPG++E++QL I E+LG P D
Sbjct: 225 ACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDD 259
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 107
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 108 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 218
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278
Query: 290 EVI 292
E I
Sbjct: 279 EQI 281
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 309
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G K F ++ L +R LDH
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHC- 73
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 74 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 290 EVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDS 349
E I + F P+ + + +P + A + ++ +
Sbjct: 245 EQIREMNPNYTEF---AFPQIKAHPWTKVFRPRTPPEA----------IALCSRLLEYTP 291
Query: 350 KKRLTPDEALRHEWL 364
RLTP EA H +
Sbjct: 292 TARLTPLEACAHSFF 306
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 27 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 85
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 86 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 138 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 256
Query: 290 EVI 292
E I
Sbjct: 257 EQI 259
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 27 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 85
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 86 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 138 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 256
Query: 290 EVI 292
E I
Sbjct: 257 EQI 259
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 23 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 81
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 82 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 133
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 134 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 192
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 252
Query: 290 EVI 292
E I
Sbjct: 253 EQI 255
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 34 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 92
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 93 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 144
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 145 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 203
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 263
Query: 290 EVI 292
E I
Sbjct: 264 EQI 266
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 309
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 139
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 258 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 310
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 311 ISVDDALQHPYI 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 132
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 251 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 303
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 304 ISVDDALQHPYI 315
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 132
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 250
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 251 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 303
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 304 ISVDDALQHPYI 315
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 139
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 257
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 258 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 310
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 311 ISVDDALQHPYI 322
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G K F ++ L +R LDH
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHC- 73
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 74 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + +YI
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 290 EVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDS 349
E I + F P+ + + +P + A + ++ +
Sbjct: 245 EQIREMNPNYTEFK---FPQIKAHPWTKVFRPRTPPEA----------IALCSRLLEYTP 291
Query: 350 KKRLTPDEALRHEWL 364
RLTP EA H +
Sbjct: 292 TARLTPLEACAHSFF 306
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 176
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 347
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 348 ISVDDALQHPYI 359
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 176
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 347
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 348 ISVDDALQHPYI 359
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 131
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 302
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 303 ISVDDALQHPYI 314
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 19 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 77
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 78 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 129
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 130 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 188
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 248
Query: 290 EVI 292
E I
Sbjct: 249 EQI 251
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 256
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 257 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 309
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 310 ISVDDALQHPYI 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 30/252 (11%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L + ELM+ NL ++I+ +++ S L + ++
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 137
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + Y+ +R+YR+PEV
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 195
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDE-------VI 292
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E +
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 255
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
R + P+ +S +K AS R D +++ D KR
Sbjct: 256 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR-------DLLSKMLVIDPAKR 308
Query: 353 LTPDEALRHEWL 364
++ D+AL+H ++
Sbjct: 309 ISVDDALQHPYI 320
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 73
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 74 --------NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 290 EVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDS 349
E I + F P+ + + +P + A + ++ +
Sbjct: 245 EQIREMNPNYTEFK---FPQIKAHPWTKVFRPRTPPEA----------IALCSRLLEYTP 291
Query: 350 KKRLTPDEALRHEWL 364
RLTP EA H +
Sbjct: 292 TARLTPLEACAHSFF 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 16 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 74
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 75 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 126
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 127 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 185
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 245
Query: 290 EVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDS 349
E I + F P+ + + +P + A + ++ +
Sbjct: 246 EQIREMNPNYTEFK---FPQIKAHPWTKVFRPRTPPEA----------IALCSRLLEYTP 292
Query: 350 KKRLTPDEALRHEWL 364
RLTP EA H +
Sbjct: 293 TARLTPLEACAHSFF 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 73
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 74 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 290 EVI 292
E I
Sbjct: 245 EQI 247
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G KRF ++ L +R LDH
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 73
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 74 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 290 EVI 292
E I
Sbjct: 245 EQI 247
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 22/201 (10%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-----CYSHQ-RV 225
R F + L++ L+ +H N++H DLKP N+ + +K+ DFG + YSH+ +
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE-DLVLKIGDFGLARIMDPHYSHKGHL 181
Query: 226 YTYIQSRFYRSPEVILGLP--YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI 283
+ +++YRSP ++L P Y IDMW+ GCI AE+ TG LF G +E+EQ+ I+E
Sbjct: 182 SEGLVTKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240
Query: 284 LGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQ 343
+ V++ R+ L P I N KP ++ + + R VDF+ Q
Sbjct: 241 I-----PVVHEEDRQELL---SVIPVYIRNDMTEPHKPLTQLLPGISR----EAVDFLEQ 288
Query: 344 CFNWDSKKRLTPDEALRHEWL 364
+ RLT +EAL H ++
Sbjct: 289 ILTFSPMDRLTAEEALSHPYM 309
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + + +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P E
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPE--------- 247
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P T + R + G K VL + D +++ D
Sbjct: 248 --FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 34/315 (10%)
Query: 61 ERTEIEKYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLR 120
+R + Y + +G + + + L +G K F ++ L +R LDH
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHC- 73
Query: 121 KKDADSSYNVIHMLEYFYFRN------HLCISFELMNLNLYELIKRNNYQGFSLGLI--R 172
N++ + +FY +L + + + +Y + + + +L +I +
Sbjct: 74 --------NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVK 125
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQ 230
+ + L + L +H I H D+KP+N+LL ++ +K+ DFGS+ + + I
Sbjct: 126 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-DTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 231 SRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPD 289
SR+YR+PE+I G Y ID+WS GC+LAEL G P+FPG++ V+QL I+++LG P
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 290 EVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDS 349
E I + F P+ + + +P + A + ++ +
Sbjct: 245 EQIREMNPNYTEF---AFPQIKAHPWTKVFRPRTPPEA----------IALCSRLLEYTP 291
Query: 350 KKRLTPDEALRHEWL 364
RLTP EA H +
Sbjct: 292 TARLTPLEACAHSFF 306
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 124/256 (48%), Gaps = 38/256 (14%)
Query: 129 NVIHMLEYFYFRNHL------CISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQC 181
N+I +L F + L I ELM+ NL ++I+ +++ S L + ++
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-----YQMLCG 138
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEV 239
++ LH IIH DLKP N+++K ++K++DFG + + + + +R+YR+PEV
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVK--SDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
ILG+ Y +D+WS+GCI+ E+ LFPG + ++Q ++E LG P
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPA--------- 247
Query: 300 LFFDSKGTPRCITNSKGRKRKPG---SKDMASVL--------RCNDKAFVDFVTQCFNWD 348
F K P + R + G K VL + D +++ D
Sbjct: 248 --FMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 349 SKKRLTPDEALRHEWL 364
+ KR++ DEAL+H ++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 15/260 (5%)
Query: 108 QALIEVRILDHLRKKDADSSYNV-IHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGF 166
+ L E+R+L+H + ++ +H E + +L ELM +L ++I +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVT--ELMRTDLAQVI-HDQRIVI 131
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
S I+ F + ++ L +LH ++H DL P N+LL +I + +
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT 191
Query: 227 TYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILG 285
Y+ R+YR+PE+++ + +DMWS GC++AE++ LF G QL I+E++G
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG 251
Query: 286 CPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCF 345
P E + + F S + NS ++ +V+ D +D + +
Sbjct: 252 TPKIEDV-------VMFSSPSARDYLRNSLS---NVPARAWTAVVPTADPVALDLIAKML 301
Query: 346 NWDSKKRLTPDEALRHEWLK 365
++ ++R++ ++ALRH + +
Sbjct: 302 EFNPQRRISTEQALRHPYFE 321
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 15/260 (5%)
Query: 108 QALIEVRILDHLRKKDADSSYNV-IHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGF 166
+ L E+R+L+H + ++ +H E + +L ELM +L ++I
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVT--ELMRTDLAQVIHDQRIV-I 131
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
S I+ F + ++ L +LH ++H DL P N+LL +I + +
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT 191
Query: 227 TYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILG 285
Y+ R+YR+PE+++ + +DMWS GC++AE++ LF G QL I+E++G
Sbjct: 192 HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG 251
Query: 286 CPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCF 345
P E + + F S + NS ++ +V+ D +D + +
Sbjct: 252 TPKIEDV-------VMFSSPSARDYLRNSLS---NVPARAWTAVVPTADPVALDLIAKML 301
Query: 346 NWDSKKRLTPDEALRHEWLK 365
++ ++R++ ++ALRH + +
Sbjct: 302 EFNPQRRISTEQALRHPYFE 321
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 53/259 (20%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RY I+ ++GKGSFG+V++ D T ++Y A K+
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQ-------------------QEY---------AVKV 54
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
N + K + L EV +L L + + ++ FY
Sbjct: 55 I--------------NKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L EL + E+IKR + I + FS + +H+ NI+H DLKPEN+L
Sbjct: 101 ELYTGGELFD----EIIKRKRFSEHDAARIIKQVFS---GITYMHKHNIVHRDLKPENIL 153
Query: 202 LKQRGSS-SIKVIDFG-SSCYSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCIL 258
L+ + IK+IDFG S+C+ ++ I + +Y +PEV+ G Y D+WS G IL
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVIL 212
Query: 259 AELYTGCPLFPGENEVEQL 277
L +G P F G+NE + L
Sbjct: 213 YILLSGTPPFYGKNEYDIL 231
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 55/260 (21%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNT-HALKYYGNQLTEFERTEIEKYLEIWYLGLDACK 80
RY I+ ++GKGSFG+V++ D T +A+K
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI--------------------------- 55
Query: 81 IHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFR 140
N + K + L EV +L L + + ++ FY
Sbjct: 56 ----------------NKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99
Query: 141 NHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
L EL + E+IKR + I + FS + +H+ NI+H DLKPEN+
Sbjct: 100 GELYTGGELFD----EIIKRKRFSEHDAARIIKQVFS---GITYMHKHNIVHRDLKPENI 152
Query: 201 LLKQRGSS-SIKVIDFG-SSCYSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
LL+ + IK+IDFG S+C+ ++ I + +Y +PEV+ G Y D+WS G I
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVI 211
Query: 258 LAELYTGCPLFPGENEVEQL 277
L L +G P F G+NE + L
Sbjct: 212 LYILLSGTPPFYGKNEYDIL 231
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 55/260 (21%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNT-HALKYYGNQLTEFERTEIEKYLEIWYLGLDACK 80
RY I+ ++GKGSFG+V++ D T +A+K
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI--------------------------- 55
Query: 81 IHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFR 140
N + K + L EV +L L + + ++ FY
Sbjct: 56 ----------------NKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99
Query: 141 NHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
L EL + E+IKR + I + FS + +H+ NI+H DLKPEN+
Sbjct: 100 GELYTGGELFD----EIIKRKRFSEHDAARIIKQVFS---GITYMHKHNIVHRDLKPENI 152
Query: 201 LLKQRGSS-SIKVIDFG-SSCYSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
LL+ + IK+IDFG S+C+ ++ I + +Y +PEV+ G Y D+WS G I
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVI 211
Query: 258 LAELYTGCPLFPGENEVEQL 277
L L +G P F G+NE + L
Sbjct: 212 LYILLSGTPPFYGKNEYDIL 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 52/262 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RY+ V+GKGSFG+VI D T A K+
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQEC----------------------------AVKV 58
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
+ + Q K L EV++L L + Y YFY
Sbjct: 59 ISKRQVKQ-------------KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
+ EL + E+I R + I R S + +H+ I+H DLKPEN+L
Sbjct: 106 EVYTGGELFD----EIISRKRFSEVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLL 158
Query: 202 LKQRG-SSSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCIL 258
L+ + ++I++IDFG S + + +++ I + +Y +PEV+ G Y D+WS G IL
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVIL 217
Query: 259 AELYTGCPLFPGENEVEQLACI 280
L +GCP F G NE + L +
Sbjct: 218 YILLSGCPPFNGANEYDILKKV 239
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 52/262 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RY+ V+GKGSFG+VI D T A K+
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQEC----------------------------AVKV 81
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
+ + Q K L EV++L L + Y YFY
Sbjct: 82 ISKRQVKQ-------------KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 128
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
+ EL + E+I R + I R S + +H+ I+H DLKPEN+L
Sbjct: 129 EVYTGGELFD----EIISRKRFSEVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLL 181
Query: 202 LKQRG-SSSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCIL 258
L+ + ++I++IDFG S + + +++ I + +Y +PEV+ G Y D+WS G IL
Sbjct: 182 LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVIL 240
Query: 259 AELYTGCPLFPGENEVEQLACI 280
L +GCP F G NE + L +
Sbjct: 241 YILLSGCPPFNGANEYDILKKV 262
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 52/262 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RY+ V+GKGSFG+VI D T A K+
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQEC----------------------------AVKV 82
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
+ + Q K L EV++L L + Y YFY
Sbjct: 83 ISKRQVKQ-------------KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 129
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
+ EL + E+I R + I R S + +H+ I+H DLKPEN+L
Sbjct: 130 EVYTGGELFD----EIISRKRFSEVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLL 182
Query: 202 LKQRG-SSSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCIL 258
L+ + ++I++IDFG S + + +++ I + +Y +PEV+ G Y D+WS G IL
Sbjct: 183 LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVIL 241
Query: 259 AELYTGCPLFPGENEVEQLACI 280
L +GCP F G NE + L +
Sbjct: 242 YILLSGCPPFNGANEYDILKKV 263
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 110/262 (41%), Gaps = 52/262 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RY+ V+GKGSFG+VI D T A K+
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQEC----------------------------AVKV 64
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
+ + Q K L EV++L L + Y YFY
Sbjct: 65 ISKRQVKQ-------------KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 111
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
+ EL + E+I R + I R S + +H+ I+H DLKPEN+L
Sbjct: 112 EVYTGGELFD----EIISRKRFSEVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLL 164
Query: 202 LKQRGS-SSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCIL 258
L+ + ++I++IDFG S + + +++ I + +Y +PEV+ G Y D+WS G IL
Sbjct: 165 LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVIL 223
Query: 259 AELYTGCPLFPGENEVEQLACI 280
L +GCP F G NE + L +
Sbjct: 224 YILLSGCPPFNGANEYDILKKV 245
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 108/262 (41%), Gaps = 52/262 (19%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
RY+ V+GKGSFG+VI D T A K+
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQEC----------------------------AVKV 58
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
+ + Q K L EV++L L + Y YFY
Sbjct: 59 ISKRQVKQ-------------KTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVG 105
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
+ EL + E+I R + I R S + H+ I+H DLKPEN+L
Sbjct: 106 EVYTGGELFD----EIISRKRFSEVDAARIIRQVLS---GITYXHKNKIVHRDLKPENLL 158
Query: 202 LKQRG-SSSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCIL 258
L+ + ++I++IDFG S + + ++ I + +Y +PEV+ G Y D+WS G IL
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVIL 217
Query: 259 AELYTGCPLFPGENEVEQLACI 280
L +GCP F G NE + L +
Sbjct: 218 YILLSGCPPFNGANEYDILKKV 239
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 148 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 206
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 207 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 267 --DGLNAYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 320
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 321 RYDHQERLTALEAMTHPYFQ 340
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 151/353 (42%), Gaps = 95/353 (26%)
Query: 18 HICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLD 77
H+ Y+ ++ +G G++G+V+ D ++T ER
Sbjct: 34 HLSEMYQRVKKLGSGAYGEVLLCRD-------------KVTHVER--------------- 65
Query: 78 ACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF 137
A KI + S+S S N K A++ ++LDH N++ + ++F
Sbjct: 66 AIKIIRKTSVST---------SSNSKLLEEVAVL--KLLDH---------PNIMKLYDFF 105
Query: 138 Y-FRNHLCISFELMNLNLY-ELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDL 195
RN+ + L+ E+I R + +I + S V LH+ NI+H DL
Sbjct: 106 EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVT---YLHKHNIVHRDL 162
Query: 196 KPENVLLKQRGSSS-IKVIDFG-SSCYSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMW 252
KPEN+LL+ + + IK++DFG S+ + +Q ++ + + +Y +PEV L Y D+W
Sbjct: 163 KPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVW 221
Query: 253 SLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCIT 312
S+G IL L G P F G+ + E++ + + FDS P
Sbjct: 222 SIGVILFILLAGYPPFGGQTD---------------QEILRKVEKGKYTFDS---PEWKN 263
Query: 313 NSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
S+G K D + Q +DS++R++ +AL H W+K
Sbjct: 264 VSEGAK--------------------DLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 246 --DGLNVYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 300 RYDHQERLTALEAMTHPYFQ 319
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 246 --DGLNVYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 300 RYDHQERLTALEAMTHPYFQ 319
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 246 --DGLNVYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 300 RYDHQERLTALEAMTHPYFQ 319
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 246 --DGLNVYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 300 RYDHQERLTALEAMTHPYFQ 319
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 247 --DGLNVYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 300
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 301 RYDHQERLTALEAMTHPYFQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 246 --DGLNVYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 300 RYDHQERLTALEAMTHPYFQ 319
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 246 --DGLNVYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 300 RYDHQERLTALEAMTHPYFQ 319
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 129 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 187
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 188 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 247
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 248 --DGLNVYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 301
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 302 RYDHQERLTALEAMTHPYFQ 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ +++ID+G + + H +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ L Y +DMWSLGC+ A + + P F G + +QL I ++LG
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDM-ASVLRCNDKAFVDFVTQCF 345
D + ++ R+ D P+ RKP K M A +DF+ +
Sbjct: 247 --DGLNVYLNKYRIELD----PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 300
Query: 346 NWDSKKRLTPDEALRHEWLK 365
+D ++RLT EA+ H + +
Sbjct: 301 RYDHQERLTALEAMTHPYFQ 320
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NVL+ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + L++ L H + I+H D+KP NV++ + +++ID+G + + H Q
Sbjct: 139 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ-QKKLRLIDWGLAEFYHPAQEYNVR 197
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ Y +DMWSLGC+LA + + P F G++ +QL I ++LG
Sbjct: 198 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 257
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFN 346
+E+ + + D I RKR + + +A +D + +
Sbjct: 258 --EELYGYLKKYHIDLDPHFND--ILGQHSRKRWENFIHSENRHLVSPEA-LDLLDKLLR 312
Query: 347 WDSKKRLTPDEALRHEWL 364
+D ++RLT EA+ H +
Sbjct: 313 YDHQQRLTAKEAMEHPYF 330
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 10/206 (4%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + L++ L H + I+H D+KP NV++ + +++ID+G + + H
Sbjct: 126 YQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ-QKKLRLIDWGLAEFYH 184
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G++ +QL
Sbjct: 185 PAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLV 244
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFV 338
I ++LG +E+ + + D I RKR + + +A +
Sbjct: 245 RIAKVLGT--EELYGYLKKYHIDLDPHFND--ILGQHSRKRWENFIHSENRHLVSPEA-L 299
Query: 339 DFVTQCFNWDSKKRLTPDEALRHEWL 364
D + + +D ++RLT EA+ H +
Sbjct: 300 DLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 123 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 181
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 242 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 295
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 296 LDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 112/259 (43%), Gaps = 54/259 (20%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
YE+ EVIGKG+F V R ++ +T G Q A KI
Sbjct: 26 YELCEVIGKGAFSVVRRCINRET--------GQQF--------------------AVKIV 57
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNH 142
+ + G E+ H +L H +++ +LE +
Sbjct: 58 DVAKFTSSPGLSTEDLKREASICH--------MLKHP---------HIVELLETYSSDGM 100
Query: 143 LCISFELMNLN--LYELIKRNNYQGF--SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPE 198
L + FE M+ +E++KR + GF S + + +++ LR H NIIH D+KPE
Sbjct: 101 LYMVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPE 159
Query: 199 NVLLKQR-GSSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSL 254
NVLL + S+ +K+ DFG + S + + + +PEV+ PYG P+D+W
Sbjct: 160 NVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGC 219
Query: 255 GCILAELYTGCPLFPGENE 273
G IL L +GC F G E
Sbjct: 220 GVILFILLSGCLPFYGTKE 238
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 182
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 243 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 296
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 297 LDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 182
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 243 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 296
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 297 LDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 160/400 (40%), Gaps = 115/400 (28%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
YEI +IG+GS+G V A D N + N++ E L CK
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFE---------------DLIDCK-- 72
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNH 142
+ L E+ IL+ L+ +++I + F +
Sbjct: 73 -------------------------RILREITILNRLKSDYIIRLHDLIIPEDLLKF-DE 106
Query: 143 LCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL 202
L I E+ + +L +L K + + ++ ++L+ + +H IIH DLKP N LL
Sbjct: 107 LYIVLEIADSDLKKLFKTPIF--LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLL 164
Query: 203 KQRGSSSIKVIDFGSSCYSH----------------------------QRVYTYIQSRFY 234
Q S+K+ DFG + + +++ +++ +R+Y
Sbjct: 165 NQ--DCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWY 222
Query: 235 RSPEVIL-GLPYGPPIDMWSLGCILAELYTGC-----------PLFPG------------ 270
R+PE+IL Y ID+WS GCI AEL PLFPG
Sbjct: 223 RAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNS 282
Query: 271 -----ENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKD 325
++ +QL I ++G PP+E + +++ + K P R SK
Sbjct: 283 KKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFP-------TRDGIDLSKK 335
Query: 326 MASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+S+ K +D + ++++KR+T D+AL H +LK
Sbjct: 336 YSSI----SKEGIDLLESMLRFNAQKRITIDKALSHPYLK 371
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 136/346 (39%), Gaps = 92/346 (26%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
Y+ILE +G G+FG V R ++ T R + K++ Y LD +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATG---------------RVFVAKFINTPY-PLDKYTVK 96
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDA-DSSYNVIHMLEYFYFRN 141
E S+ + HH LI + DA + Y ++ +LE+
Sbjct: 97 NEISIMN--------------QLHHPKLINLH--------DAFEDKYEMVLILEF----- 129
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L L++ I +Y+ S + + + L+ +H +I+H D+KPEN++
Sbjct: 130 -------LSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIM 181
Query: 202 LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILA 259
+ + +SS+K+IDFG + + V + + +PE++ P G DMW++G +
Sbjct: 182 CETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGY 241
Query: 260 ELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKR 319
L +G F GE+++E L + R FD +K
Sbjct: 242 VLLSGLSPFAGEDDLETLQNV---------------KRCDWEFDEDAFSSVSPEAK---- 282
Query: 320 KPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
DF+ + +KRLT +AL H WLK
Sbjct: 283 -------------------DFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 130 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 188
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 189 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 248
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 249 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 302
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 303 LDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 12/207 (5%)
Query: 163 YQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH 222
YQ + IR + + +++ L H I+H D+KP NV++ +++ID+G + + H
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH 183
Query: 223 --QRVYTYIQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLA 278
Q + SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAF 337
I ++LG +++ + + + D + +S+ R +R S++ V
Sbjct: 244 RIAKVLGT--EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEA 297
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
+DF+ + +D + RLT EA+ H +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH--QRVYTY 228
IR + + +++ L H I+H D+KP NV++ +++ID+G + + H Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHPGQEYNVR 191
Query: 229 IQSRFYRSPEVILGLP-YGPPIDMWSLGCILAEL-YTGCPLFPGENEVEQLACIMEILGC 286
+ SR+++ PE+++ Y +DMWSLGC+LA + + P F G + +QL I ++LG
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGR-KRKPGSKDMASVLRCNDKAFVDFVTQCF 345
+++ + + + D + +S+ R +R S++ V +DF+ +
Sbjct: 252 --EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV----SPEALDFLDKLL 305
Query: 346 NWDSKKRLTPDEALRHEWL 364
+D + RLT EA+ H +
Sbjct: 306 RYDHQSRLTAREAMEHPYF 324
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 48/241 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFE-LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+++ L+ + + L + E L +L +++ G I +Q L LH
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 134
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLP 244
+IH D+K +N+LL GS +K+ DFG + T + + ++ +PEV+
Sbjct: 135 NQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
YGP +D+WSLG + E+ G P + EN + L I +
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----------------------T 230
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
GTP K ++++ R DF+ +C + D +KR + E L+H++L
Sbjct: 231 NGTPELQNPEK----------LSAIFR-------DFLNRCLDMDVEKRGSAKELLQHQFL 273
Query: 365 K 365
K
Sbjct: 274 K 274
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 51/278 (18%)
Query: 91 GGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELM 150
G + D+N N ++FH + E+ +L L + ++V +YFY EL
Sbjct: 77 GRYSDDNK--NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELF 134
Query: 151 NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGS-SS 209
++I R+ + I + ++ + LH+ NI+H D+KPEN+LL+ + S +
Sbjct: 135 E----QIINRHKFDECDAANIMK---QILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 210 IKVIDFGSSCYSHQ--RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPL 267
IK++DFG S + + ++ + + +Y +PEV L Y D+WS G I+ L G P
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPP 246
Query: 268 FPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMA 327
F G+N+ ++I + + +FD +K
Sbjct: 247 FGGQND---------------QDIIKKVEKGKYYFDFNDWKNISDEAK------------ 279
Query: 328 SVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+ + +D KR T +EAL W+K
Sbjct: 280 -----------ELIKLMLTYDYNKRCTAEEALNSRWIK 306
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 111/271 (40%), Gaps = 54/271 (19%)
Query: 13 QVLHDHICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIW 72
++ HDH+ Y+I E +G G+FG V R + T + + E ++ + K
Sbjct: 43 EIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK----- 97
Query: 73 YLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIH 132
E++ + LR +++
Sbjct: 98 ---------------------------------------EIQTMSVLRHP------TLVN 112
Query: 133 MLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENII 191
+ + F N + + +E M+ L+E + + + S + + + L +H N +
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGELFEKVA-DEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 171
Query: 192 HCDLKPENVLLKQRGSSSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
H DLKPEN++ + S+ +K+IDFG + + Q V + + +PEV G P G
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 231
Query: 250 DMWSLGCILAELYTGCPLFPGENEVEQLACI 280
DMWS+G + L +G F GEN+ E L +
Sbjct: 232 DMWSVGVLSYILLSGLSPFGGENDDETLRNV 262
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 48/241 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFE-LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+++ L+ + + L + E L +L +++ G I +Q L LH
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 134
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLP 244
+IH D+K +N+LL GS +K+ DFG + + + ++ +PEV+
Sbjct: 135 NQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKA 192
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
YGP +D+WSLG + E+ G P + EN + L I +
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----------------------T 230
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
GTP K ++++ R DF+ +C + D +KR + E L+H++L
Sbjct: 231 NGTPELQNPEK----------LSAIFR-------DFLNRCLDMDVEKRGSAKELLQHQFL 273
Query: 365 K 365
K
Sbjct: 274 K 274
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 111/271 (40%), Gaps = 54/271 (19%)
Query: 13 QVLHDHICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIW 72
++ HDH+ Y+I E +G G+FG V R + T + + E ++ + K
Sbjct: 149 EIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK----- 203
Query: 73 YLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIH 132
E++ + LR +++
Sbjct: 204 ---------------------------------------EIQTMSVLRHP------TLVN 218
Query: 133 MLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENII 191
+ + F N + + +E M+ L+E + + + S + + + L +H N +
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVA-DEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277
Query: 192 HCDLKPENVLLKQRGSSSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
H DLKPEN++ + S+ +K+IDFG + + Q V + + +PEV G P G
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 337
Query: 250 DMWSLGCILAELYTGCPLFPGENEVEQLACI 280
DMWS+G + L +G F GEN+ E L +
Sbjct: 338 DMWSVGVLSYILLSGLSPFGGENDDETLRNV 368
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 48/241 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFE-LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+++ L+ + + L + E L +L +++ G I +Q L LH
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 134
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLP 244
+IH D+K +N+LL GS +K+ DFG + + + ++ +PEV+
Sbjct: 135 NQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 192
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
YGP +D+WSLG + E+ G P + EN + L I +
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----------------------T 230
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
GTP K ++++ R DF+ +C D +KR + E L+H++L
Sbjct: 231 NGTPELQNPEK----------LSAIFR-------DFLNRCLEMDVEKRGSAKELLQHQFL 273
Query: 365 K 365
K
Sbjct: 274 K 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 48/241 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFE-LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+++ L+ + + L + E L +L +++ G I +Q L LH
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 135
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLP 244
+IH D+K +N+LL GS +K+ DFG + + + ++ +PEV+
Sbjct: 136 NQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 193
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
YGP +D+WSLG + E+ G P + EN + L I +
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----------------------T 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
GTP K ++++ R DF+ +C D +KR + E ++H++L
Sbjct: 232 NGTPELQNPEK----------LSAIFR-------DFLNRCLEMDVEKRGSAKELIQHQFL 274
Query: 365 K 365
K
Sbjct: 275 K 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 48/241 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFE-LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+++ L+ + + L + E L +L +++ G I +Q L LH
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS 135
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLP 244
+IH ++K +N+LL GS +K+ DFG + T + + ++ +PEV+
Sbjct: 136 NQVIHRNIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 193
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
YGP +D+WSLG + E+ G P + EN + L I +
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----------------------T 231
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
GTP K ++++ R DF+ +C D +KR + E ++H++L
Sbjct: 232 NGTPELQNPEK----------LSAIFR-------DFLNRCLEMDVEKRGSAKELIQHQFL 274
Query: 365 K 365
K
Sbjct: 275 K 275
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 58/262 (22%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMN-LNLYELIKRNNYQGFSLGL 170
E+ IL+ R + N++H+ E F L + FE ++ L+++E R N F L
Sbjct: 51 EISILNIARHR------NILHLHESFESMEELVMIFEFISGLDIFE---RINTSAFELNE 101
Query: 171 --IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY-----SHQ 223
I + + + L+ LH NI H D++PEN++ + R SS+IK+I+FG + + +
Sbjct: 102 REIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR 161
Query: 224 RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI 283
++T + Y +PEV DMWSLG ++ L +G F E + + IM
Sbjct: 162 LLFTAPE---YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNA 218
Query: 284 LGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQ 343
+E S + DFV +
Sbjct: 219 EYTFDEEAFKEISIEAM--------------------------------------DFVDR 240
Query: 344 CFNWDSKKRLTPDEALRHEWLK 365
+ K R+T EAL+H WLK
Sbjct: 241 LLVKERKSRMTASEALQHPWLK 262
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 159/410 (38%), Gaps = 120/410 (29%)
Query: 18 HICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLD 77
I RYEI +IG GS+G V A D E I+K L ++ +D
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDK--------------LEKRVVAIKKILRVFEDLID 95
Query: 78 ACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF 137
+I E ++ R +H + V++LD + KD +E F
Sbjct: 96 CKRILREIAILN--------------RLNHDHV--VKVLDIVIPKD----------VEKF 129
Query: 138 YFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKP 197
+ L + E+ + + +L + Y + I+ ++L+ ++ +H I+H DLKP
Sbjct: 130 ---DELYVVLEIADSDFKKLFRTPVY--LTELHIKTLLYNLLVGVKYVHSAGILHRDLKP 184
Query: 198 ENVLLKQRGSSSIKVIDFGSS-------------------------CYSH-----QRVYT 227
N L+ Q S+KV DFG + + H +++
Sbjct: 185 ANCLVNQ--DCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTG 242
Query: 228 YIQSRFYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGC-----------PLFPGEN--- 272
++ +R+YR+PE+IL Y ID+WS+GCI AEL PLFPG +
Sbjct: 243 HVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFP 302
Query: 273 -----------------EVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSK 315
+QL I ILG P +E I + D+K R +
Sbjct: 303 LSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKE----DAKRYIRIFPKRE 358
Query: 316 GRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
G D+A + + + + ++ KR+T +E L H + K
Sbjct: 359 G-------TDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFK 401
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 155/402 (38%), Gaps = 112/402 (27%)
Query: 18 HICYRYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLD 77
H+ Y I +IG+GS+G V A D T + N++ E L
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE---------------DLI 67
Query: 78 ACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF 137
CK + L E+ IL+ L+ Y++I +
Sbjct: 68 DCK---------------------------RILREITILNRLKSDYIIRLYDLIIPDDLL 100
Query: 138 YFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKP 197
F + L I E+ + +L +L K + + I+ ++L+ +H IIH DLKP
Sbjct: 101 KF-DELYIVLEIADSDLKKLFKTPIF--LTEEHIKTILYNLLLGENFIHESGIIHRDLKP 157
Query: 198 ENVLLKQRGSSSIKVIDFGSSCYSH-------------------------QRVYTYIQSR 232
N LL Q S+KV DFG + + +++ +++ +R
Sbjct: 158 ANCLLNQ--DCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR 215
Query: 233 FYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGC-----------PLFPG---------- 270
+YR+PE+IL Y ID+WS GCI AEL PLFPG
Sbjct: 216 WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDR 275
Query: 271 -------ENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGS 323
++ +QL I I+G P ++ + ++ + K P RKP +
Sbjct: 276 NSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPH---------RKPIN 326
Query: 324 KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
+D ++ + ++ KR+T D+AL H +LK
Sbjct: 327 LKQKYPSISDDG--INLLESMLKFNPNKRITIDQALDHPYLK 366
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 48 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 101
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 102 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 155
Query: 218 SCYSHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
SC++ T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 156 SCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 216 YKRISRVEFTFPDFVTEGA 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + F +N + + E ++ L++ I +Y L I F + + +R +H+
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRHMHQ 205
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRFYRSPEVILGLPY 245
I+H DLKPEN+L R + IK+IDFG + +++ + + +PEV+
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 246 GPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSK 305
P DMWS+G I L +G F G+N+ E L I+ DE S F SK
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK 325
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 108/259 (41%), Gaps = 54/259 (20%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
YE+ EVIGKG F V R ++ +T G Q A KI
Sbjct: 26 YELCEVIGKGPFSVVRRCINRET--------GQQF--------------------AVKIV 57
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNH 142
+ + G E+ H +L H +++ +LE +
Sbjct: 58 DVAKFTSSPGLSTEDLKREASICH--------MLKHP---------HIVELLETYSSDGM 100
Query: 143 LCISFELMNLN--LYELIKRNNYQGF--SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPE 198
L + FE M+ +E++KR + GF S + + +++ LR H NIIH D+KP
Sbjct: 101 LYMVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPH 159
Query: 199 NVLLKQR-GSSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSL 254
VLL + S+ +K+ FG + S + + + +PEV+ PYG P+D+W
Sbjct: 160 CVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGC 219
Query: 255 GCILAELYTGCPLFPGENE 273
G IL L +GC F G E
Sbjct: 220 GVILFILLSGCLPFYGTKE 238
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 108/259 (41%), Gaps = 54/259 (20%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
YE+ EVIGKG F V R ++ +T G Q A KI
Sbjct: 28 YELCEVIGKGPFSVVRRCINRET--------GQQF--------------------AVKIV 59
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNH 142
+ + G E+ H +L H +++ +LE +
Sbjct: 60 DVAKFTSSPGLSTEDLKREASICH--------MLKH---------PHIVELLETYSSDGM 102
Query: 143 LCISFELMNLN--LYELIKRNNYQGF--SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPE 198
L + FE M+ +E++KR + GF S + + +++ LR H NIIH D+KP
Sbjct: 103 LYMVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPH 161
Query: 199 NVLLKQR-GSSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSL 254
VLL + S+ +K+ FG + S + + + +PEV+ PYG P+D+W
Sbjct: 162 CVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGC 221
Query: 255 GCILAELYTGCPLFPGENE 273
G IL L +GC F G E
Sbjct: 222 GVILFILLSGCLPFYGTKE 240
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+T + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 124 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 181
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+T + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 182 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 231
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 154 LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVI 213
L+ L++++ Q F + + +A + L LH ++II+ DLKPEN+LL + G IK+
Sbjct: 93 LFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH--IKIT 148
Query: 214 DFGSSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENE 273
DFG + Y Y + Y +PEV+ PY ID WS G ++ E+ G F N
Sbjct: 149 DFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT 208
Query: 274 VEQLACIMEI-LGCPP 288
++ I+ L PP
Sbjct: 209 MKTYEKILNAELRFPP 224
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 158 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS 215
Query: 250 DMWSLGCILAELYTGCPLFPGENEVEQLACIMEI 283
D+W+LGCI+ +L G P F NE A I+++
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G IKV DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IKVADFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G IKV DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IKVADFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G IKV DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IKVADFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G IKV DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IKVADFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 42/191 (21%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQR-GSSSIKVIDFGSSCY---SHQRVYTYIQSRF 233
+++ + +H+ +I+H DLKPEN+LL + +++K+ DFG + Q + + +
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPG 198
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVIN 293
Y SPEV+ PYG P+D+W+ G IL L G P F E++
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ-------------------- 238
Query: 294 TASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRL 353
+L+ K + + P +K++ + Q + KR+
Sbjct: 239 ----HKLYQQIKAGAYDFPSPEWDTVTPEAKNL--------------INQMLTINPAKRI 280
Query: 354 TPDEALRHEWL 364
T D+AL+H W+
Sbjct: 281 TADQALKHPWV 291
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 8/154 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 158 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 250 DMWSLGCILAELYTGCPLFPGENEVEQLACIMEI 283
D+W+LGCI+ +L G P F NE A I+++
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NV+ M + + L + E + L +++ + + +++Q L +LH
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHA 265
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV---YTYIQSRFYRSPEVILGLP 244
+ +IH D+K +++LL G +K+ DFG + V + + ++ +PE+I LP
Sbjct: 266 QGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
YGP +D+WSLG ++ E+ G P + E ++ + I + L PP
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PP 365
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+++ Q+G IKV DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY--IKVTDFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 158
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R +++ + Y SPE++
Sbjct: 159 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 216
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+++ Q+G IKV DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY--IKVTDFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+++ Q+G IKV DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY--IKVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+++ Q+G IKV DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY--IKVTDFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 42/183 (22%)
Query: 186 HRENIIHCDLKPENVLLKQRG-SSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVIL 241
H I+H DLKPEN+LL + +++K+ DFG + Q + + + Y SPEV+
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLF 301
PYG P+DMW+ G IL L G P F E++ RL+
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQ------------------------HRLY 215
Query: 302 FDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
K + + P +KD+ + + + KR+T EAL+H
Sbjct: 216 QQIKAGAYDFPSPEWDTVTPEAKDL--------------INKMLTINPAKRITASEALKH 261
Query: 362 EWL 364
W+
Sbjct: 262 PWI 264
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVIL 241
LH++ II+ DLKPEN++L +G +K+ DFG S + +T+ + Y +PE+++
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGH--VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM 194
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI-LGCPP 288
+ +D WSLG ++ ++ TG P F GEN + + I++ L PP
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+++ Q+G IKV DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY--IKVTDFGLAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 42/183 (22%)
Query: 186 HRENIIHCDLKPENVLLKQRG-SSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVIL 241
H I+H DLKPEN+LL + +++K+ DFG + Q + + + Y SPEV+
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLF 301
PYG P+DMW+ G IL L G P F E++ RL+
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQ------------------------HRLY 215
Query: 302 FDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
K + + P +KD+ + + + KR+T EAL+H
Sbjct: 216 QQIKAGAYDFPSPEWDTVTPEAKDL--------------INKMLTINPAKRITASEALKH 261
Query: 362 EWL 364
W+
Sbjct: 262 PWI 264
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 129 NVIHMLEYFYFRNHLCISFELMN----LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRL 184
NV+ M + + L + E + ++ + N Q I +++Q L +
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------IAAVCLAVLQALSV 131
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV---YTYIQSRFYRSPEVIL 241
LH + +IH D+K +++LL G +K+ DFG + V + + ++ +PE+I
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 189
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
LPYGP +D+WSLG ++ E+ G P + E ++ + I + L PP
Sbjct: 190 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PP 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 156 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS 213
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+++ Q+G IKV DFG + R + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY--IKVTDFGFAKRVKGRTWXLCGT 202
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 129 NVIHMLEYFYFRNHLCISFELMN----LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRL 184
NV+ M + + L + E + ++ + N Q I +++Q L +
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------IAAVCLAVLQALSV 135
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV---YTYIQSRFYRSPEVIL 241
LH + +IH D+K +++LL G +K+ DFG + V + + ++ +PE+I
Sbjct: 136 LHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 193
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
LPYGP +D+WSLG ++ E+ G P + E ++ + I + L PP
Sbjct: 194 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+++ Q+G IKV DFG + R + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY--IKVTDFGFAKRVKGRTWXLCGT 201
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 129 NVIHMLEYFYFRNHLCISFELMN----LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRL 184
NV+ M + + L + E + ++ + N Q I +++Q L +
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------IAAVCLAVLQALSV 142
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV---YTYIQSRFYRSPEVIL 241
LH + +IH D+K +++LL G +K+ DFG + V + + ++ +PE+I
Sbjct: 143 LHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 200
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
LPYGP +D+WSLG ++ E+ G P + E ++ + I + L PP
Sbjct: 201 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PP 245
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 154
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R +++ + Y SPE++
Sbjct: 155 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS 212
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 78 ACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF 137
CK + + + GG GS++ + ++ +D LRK N+I + + +
Sbjct: 41 TCKEYAVKIIDVTGG-----GSFSAEEVQELREATLKEVDILRKVSGHP--NIIQLKDTY 93
Query: 138 YFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLK 196
+ F+LM L++ + S R+ +L++ + LH+ NI+H DLK
Sbjct: 94 ETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLK 151
Query: 197 PENVLLKQRGSSSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVIL-----GLP-YGPP 248
PEN+LL +IK+ DFG SC +++ + + Y +PE+I P YG
Sbjct: 152 PENILLDD--DMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 249 IDMWSLGCILAELYTGCPLFPGENEVEQLACIM 281
+DMWS G I+ L G P F ++ L IM
Sbjct: 210 VDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 156 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 158 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 156 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NV+ M + + L + E + L +++ + + +++Q L +LH
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHA 143
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV---YTYIQSRFYRSPEVILGLP 244
+ +IH D+K +++LL G +K+ DFG + V + + ++ +PE+I LP
Sbjct: 144 QGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
YGP +D+WSLG ++ E+ G P + E ++ + I + L PP
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 158 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 155
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 156 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 213
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 158
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 159 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 216
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 217 DLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 131 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 188
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 158 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 215
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 216 DLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 160
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 161 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 218
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 196
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 129 NVIHMLEYFYFRNHLCISFELMN----LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRL 184
NV+ M + + L + E + ++ + N Q I +++Q L +
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------IAAVCLAVLQALSV 185
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV---YTYIQSRFYRSPEVIL 241
LH + +IH D+K +++LL G +K+ DFG + V + + ++ +PE+I
Sbjct: 186 LHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELIS 243
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
LPYGP +D+WSLG ++ E+ G P + E ++ + I + L PP
Sbjct: 244 RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PP 288
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 201
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 139 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 196
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 201
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 201
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 216
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 139
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 140 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 197
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 198 DLWALGCIIYQLVAGLPPFRAGNE 221
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 165 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 222
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 201
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 137 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 194
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 201
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 103/269 (38%), Gaps = 58/269 (21%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 51 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 104
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 105 KLSRFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSNGE--LKIADFGW 158
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 159 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
Query: 277 LACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKA 336
I + PD V A
Sbjct: 219 YRRISRVEFTFPDFVTEGAR---------------------------------------- 238
Query: 337 FVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
D +++ ++ +RLT E L H W+K
Sbjct: 239 --DLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 145 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 202
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS 231
R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R + +
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRTWXLCGT 201
Query: 232 RFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG +
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGAT 216
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+T + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 217 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 132
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 133 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 190
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 191 DLWALGCIIYQLVAGLPPFRAGNE 214
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 133
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 134 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 191
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 192 DLWALGCIIYQLVAGLPPFRAGNE 215
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 49/243 (20%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNY--QGFSLGLIRRFAFSLVQCLRLL 185
N++ + + H + F+L+ L+E I Y + + I++ +++ C
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC---- 137
Query: 186 HRENIIHCDLKPENVLLKQR-GSSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVIL 241
H+ ++H DLKPEN+LL + +++K+ DFG + Q + + + Y SPEV+
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLF 301
PYG P+D+W+ G IL L G P F E++ RL+
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------------------------HRLY 233
Query: 302 FDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
K + + P +KD+ + + + KR+T EAL+H
Sbjct: 234 QQIKAGAYDFPSPEWDTVTPEAKDL--------------INKMLTINPSKRITAAEALKH 279
Query: 362 EWL 364
W+
Sbjct: 280 PWI 282
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+++ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 134
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 135 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 192
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 193 DLWALGCIIYQLVAGLPPFRAGNE 216
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 27/189 (14%)
Query: 129 NVIHMLEYF--YFRNHLCISFELMNLNLYELIK-----RNNYQGFSL--GLIRRFAFSLV 179
NVI + + F + + + F+ +L+ +IK + N + L G+++ + ++
Sbjct: 79 NVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 180 QCLRLLHRENIIHCDLKPENVLLKQRGS--SSIKVIDFG------SSCYSHQRVYTYIQS 231
+ LH ++H DLKP N+L+ G +K+ D G S + + +
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 198
Query: 232 RFYRSPEVILGLP-YGPPIDMWSLGCILAELYTGCPLFPGENEV---------EQLACIM 281
+YR+PE++LG Y ID+W++GCI AEL T P+F E +QL I
Sbjct: 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 258
Query: 282 EILGCPPDE 290
++G P D+
Sbjct: 259 NVMGFPADK 267
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 135
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 136 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 193
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 194 DLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 78 ACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF 137
CK + + + GG GS++ + ++ +D LRK N+I + + +
Sbjct: 28 TCKEYAVKIIDVTGG-----GSFSAEEVQELREATLKEVDILRK--VSGHPNIIQLKDTY 80
Query: 138 YFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLK 196
+ F+LM L++ + S R+ +L++ + LH+ NI+H DLK
Sbjct: 81 ETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLK 138
Query: 197 PENVLLKQRGSSSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVIL-----GLP-YGPP 248
PEN+LL +IK+ DFG SC +++ + Y +PE+I P YG
Sbjct: 139 PENILLDD--DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE 196
Query: 249 IDMWSLGCILAELYTGCPLFPGENEVEQLACIM 281
+DMWS G I+ L G P F ++ L IM
Sbjct: 197 VDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 154
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 155 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 212
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 213 DLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+++ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGY--IQVTDFGLAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 78 ACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYF 137
CK + + + GG GS++ + ++ +D LRK N+I + + +
Sbjct: 41 TCKEYAVKIIDVTGG-----GSFSAEEVQELREATLKEVDILRKVSGHP--NIIQLKDTY 93
Query: 138 YFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLK 196
+ F+LM L++ + S R+ +L++ + LH+ NI+H DLK
Sbjct: 94 ETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLK 151
Query: 197 PENVLLKQRGSSSIKVIDFGSSCY--SHQRVYTYIQSRFYRSPEVIL-----GLP-YGPP 248
PEN+LL +IK+ DFG SC +++ + Y +PE+I P YG
Sbjct: 152 PENILLDD--DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 249 IDMWSLGCILAELYTGCPLFPGENEVEQLACIM 281
+DMWS G I+ L G P F ++ L IM
Sbjct: 210 VDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 136 YFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCD 194
YF F++ + F L EL+K G F R + +V L LH + IIH D
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 162
Query: 195 LKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTYIQSRFYRSPEVILGLPYGPPI 249
LKPEN+LL + I++ DFG++ R ++ + Y SPE++
Sbjct: 163 LKPENILLNE--DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 220
Query: 250 DMWSLGCILAELYTGCPLFPGENE 273
D+W+LGCI+ +L G P F NE
Sbjct: 221 DLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 52 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 105
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 106 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 159
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 160 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 220 YKRISRVEFTFPDFVTEGA 238
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELIK 159
K HQ EV I HLR N++ + YF+ R +L + + + EL K
Sbjct: 65 KAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQK 118
Query: 160 RNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS 218
+ + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG S
Sbjct: 119 LSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGWS 172
Query: 219 CYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 173 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 232
Query: 278 ACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 233 KRISRVEFTFPDFVTEGA 250
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ----RVYTYI 229
+A + L LH+ II+ DLK +NV+L G IK+ DFG C H +
Sbjct: 125 YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGH--IKIADFGM-CKEHMMDGVTTREFC 181
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
+ Y +PE+I PYG +D W+ G +L E+ G P F GE+E E IME
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 51 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 104
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 105 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 158
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 159 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 219 YKRISRVEFTFPDFVTEGA 237
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 103/269 (38%), Gaps = 58/269 (21%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 51 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 104
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 105 KLSRFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSNGE--LKIADFGW 158
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 159 SVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
Query: 277 LACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKA 336
I + PD V A
Sbjct: 219 YRRISRVEFTFPDFVTEGAR---------------------------------------- 238
Query: 337 FVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
D +++ ++ +RLT E L H W+K
Sbjct: 239 --DLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ ++ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQ 245
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 104 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 157
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 158 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 218 YKRISRVEFTFPDFVTEGA 236
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 102/244 (41%), Gaps = 52/244 (21%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGF-----SLGLIRRFAFSLVQCLR 183
N++ + + + NHL + +L++ EL R +GF + LIR+ ++ +
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGG--ELFDRIVEKGFYTEKDASTLIRQ----VLDAVY 134
Query: 184 LLHRENIIHCDLKPENVLL-KQRGSSSIKVIDFGSSCYSHQR--VYTYIQSRFYRSPEVI 240
LHR I+H DLKPEN+L Q S I + DFG S + + T + Y +PEV+
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL 194
Query: 241 LGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRL 300
PY +D WS+G I L G P F EN+ + I+ +
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL---------------KAEY 239
Query: 301 FFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALR 360
FDS P D++ + DF+ D KR T ++A R
Sbjct: 240 EFDS----------------PYWDDISDSAK-------DFIRNLMEKDPNKRYTCEQAAR 276
Query: 361 HEWL 364
H W+
Sbjct: 277 HPWI 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVY 226
R + +V L LH + IIH DLKPEN+LL + I++ DFG++ R
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNE--DMHIQITDFGTAKVLSPESKQARAN 192
Query: 227 TYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENE 273
+++ + Y SPE++ D+W+LGCI+ +L G P F NE
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 46 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 99
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 100 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 153
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 154 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 214 YKRISRVEFTFPDFVTEGA 232
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 52 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 105
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 106 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 159
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE I G + +D+WSLG + E G P F E
Sbjct: 160 SVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 220 YKRISRVEFTFPDFVTEGA 238
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 101 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 154
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 155 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 215 YKRISRVEFTFPDFVTEGA 233
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELIK 159
K HQ EV I HLR N++ + YF+ R +L + + + EL K
Sbjct: 74 KAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 160 RNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS 218
+ + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG S
Sbjct: 128 LSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGWS 181
Query: 219 CYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 182 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 241
Query: 278 ACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 242 KRISRVEFTFPDFVTEGA 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 104 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 157
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 158 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 218 YKRISRVEFTFPDFVTEGA 236
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ ++G I+V DFG + R
Sbjct: 125 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGY--IQVTDFGFAKRVKGRT 182
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 183 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 232
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 44 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 97
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 98 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 151
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 152 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 212 YKRISRVEFTFPDFVTEGA 230
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVIL 241
LH++ II+ DLKPEN++L +G +K+ DFG S + + + + Y +PE+++
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGH--VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI-LGCPP 288
+ +D WSLG ++ ++ TG P F GEN + + I++ L PP
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP 242
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+++ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +PE+I+ Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 48 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 101
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 102 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 155
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 156 SVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 216 YKRISRVEFTFPDFVTEGA 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 51/243 (20%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN--LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLH 186
N++ + E+F + + + E+ E+I R + +I + S LH
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLH 121
Query: 187 RENIIHCDLKPENVLLKQRGSSS-IKVIDFGSSCYSHQRVYTYIQSR----FYRSPEVIL 241
+ NI+H DLKPEN+LL+ + + IK++DFG S +H V ++ R +Y +PEV L
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKMKERLGTAYYIAPEV-L 178
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLF 301
Y D+WS G IL L G P F G+ + E++ + +
Sbjct: 179 RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD---------------QEILKRVEKGKFS 223
Query: 302 FDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
FD + +K V ++ KR++ +EAL H
Sbjct: 224 FDPPDWTQVSDEAK-----------------------QLVKLMLTYEPSKRISAEEALNH 260
Query: 362 EWL 364
W+
Sbjct: 261 PWI 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 51/243 (20%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN--LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLH 186
N++ + E+F + + + E+ E+I R + +I + S LH
Sbjct: 82 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLH 138
Query: 187 RENIIHCDLKPENVLLKQRGSSS-IKVIDFGSSCYSHQRVYTYIQSR----FYRSPEVIL 241
+ NI+H DLKPEN+LL+ + + IK++DFG S +H V ++ R +Y +PEV L
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKMKERLGTAYYIAPEV-L 195
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLF 301
Y D+WS G IL L G P F G+ + E++ + +
Sbjct: 196 RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD---------------QEILKRVEKGKFS 240
Query: 302 FDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
FD + +K V ++ KR++ +EAL H
Sbjct: 241 FDPPDWTQVSDEAK-----------------------QLVKLMLTYEPSKRISAEEALNH 277
Query: 362 EWL 364
W+
Sbjct: 278 PWI 280
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS---HQRVYT 227
++ + L L LH II+ DLKPEN+LL + G IK+ DFG S S ++ Y+
Sbjct: 129 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESIDHEKKAYS 186
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI-LGC 286
+ + Y +PEV+ + D WS G ++ E+ TG F G++ E + I++ LG
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 246
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKG 316
P S R+ F R G
Sbjct: 247 PQFLSPEAQSLLRMLFKRNPANRLGAGPDG 276
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS---HQRVYT 227
++ + L L LH II+ DLKPEN+LL + G IK+ DFG S S ++ Y+
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESIDHEKKAYS 185
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI-LGC 286
+ + Y +PEV+ + D WS G ++ E+ TG F G++ E + I++ LG
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 245
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKG 316
P S R+ F R G
Sbjct: 246 PQFLSPEAQSLLRMLFKRNPANRLGAGPDG 275
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS---HQRVYT 227
++ + L L LH II+ DLKPEN+LL + G IK+ DFG S S ++ Y+
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESIDHEKKAYS 185
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI-LGC 286
+ + Y +PEV+ + D WS G ++ E+ TG F G++ E + I++ LG
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 245
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKG 316
P S R+ F R G
Sbjct: 246 PQFLSPEAQSLLRMLFKRNPANRLGAGPDG 275
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTY 228
R +A + L LH NI++ DLKPEN+LL +G I + DFG + + T+
Sbjct: 142 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH--IVLTDFGLCKENIEHNSTTSTF 199
Query: 229 IQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIM-EILGCP 287
+ Y +PEV+ PY +D W LG +L E+ G P F N E I+ + L
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK 259
Query: 288 PDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNW 347
P+ I ++R L +G + K R ++ G+KD + F + NW
Sbjct: 260 PN--ITNSARHLL----EGLLQ-----KDRTKRLGAKD--DFMEIKSHVFFSLI----NW 302
Query: 348 DS--KKRLTP 355
D K++TP
Sbjct: 303 DDLINKKITP 312
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + Y +P +IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 96/240 (40%), Gaps = 43/240 (17%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + E F + + EL+ L++ I Y +S +++ + LH
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEAVAYLHE 166
Query: 188 ENIIHCDLKPENVLLKQRGSSS-IKVIDFG-SSCYSHQRVY-TYIQSRFYRSPEVILGLP 244
I+H DLKPEN+L + +K+ DFG S HQ + T + Y +PE++ G
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
YGP +DMWS+G I L C P +E IL C +F S
Sbjct: 227 YGPEVDMWSVGIITYILL--CGFEPFYDERGDQFMFRRILNC------------EYYFIS 272
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
N+K D V + D KKRLT +AL+H W+
Sbjct: 273 PWWDEVSLNAK-----------------------DLVRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 101 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 154
Query: 218 SCYSHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 155 SVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 215 YKRISRVEFTFPDFVTEGA 233
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 101 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 154
Query: 218 SCYSHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 155 SVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 215 YKRISRVEFTFPDFVTEGA 233
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 104 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 157
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 158 SVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 218 YKRISRVEFTFPDFVTEGA 236
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 49/243 (20%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNY--QGFSLGLIRRFAFSLVQCLRLL 185
N++ + + H + F+L+ L+E I Y + + I++ +++ C
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC---- 126
Query: 186 HRENIIHCDLKPENVLLKQR-GSSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVIL 241
H+ ++H +LKPEN+LL + +++K+ DFG + Q + + + Y SPEV+
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLF 301
PYG P+D+W+ G IL L G P F E++ RL+
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQ------------------------HRLY 222
Query: 302 FDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
K + + P +KD+ + + + KR+T EAL+H
Sbjct: 223 QQIKAGAYDFPSPEWDTVTPEAKDL--------------INKMLTINPSKRITAAEALKH 268
Query: 362 EWL 364
W+
Sbjct: 269 PWI 271
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 52 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 105
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 106 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 159
Query: 218 SCYSHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 160 SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 220 YKRISRVEFTFPDFVTEGA 238
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 48 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 101
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 102 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 155
Query: 218 SCYSHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 156 SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 216 YKRISRVEFTFPDFVTEGA 234
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
FS R +A +V LH ++I+ DLKPEN+L+ Q+G I+V DFG + R
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY--IQVTDFGFAKRVKGRT 195
Query: 226 YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVE 275
+ + +PE+IL Y +D W+LG ++ E+ G P F + ++
Sbjct: 196 WXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELIK 159
K HQ EV I HLR N++ + YF+ R +L + + + EL K
Sbjct: 50 KAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQK 103
Query: 160 RNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS 218
+ + + + I A +L C H + +IH D+KPEN+LL G +K+ +FG S
Sbjct: 104 LSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIANFGWS 157
Query: 219 CYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 158 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 217
Query: 278 ACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 218 KRISRVEFTFPDFVTEGA 235
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + EL
Sbjct: 52 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPRGEVYKELQ 105
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 106 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 159
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 160 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 220 YKRISRVEFTFPDFVTEGA 238
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 101 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 154
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 155 SVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 215 YKRISRVEFTFPDFVTEGA 233
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 101 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 154
Query: 218 SCYSHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 155 SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 215 YKRISRVEFTFPDFVTEGA 233
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 129 NVIHMLEYFYFRNHLCISFELMN----LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRL 184
NV+ M + + L + E + ++ + N Q I S+++ L
Sbjct: 103 NVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------IATVCLSVLRALSY 156
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV---YTYIQSRFYRSPEVIL 241
LH + +IH D+K +++LL G IK+ DFG + V + + ++ +PEVI
Sbjct: 157 LHNQGVIHRDIKSDSILLTSDGR--IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVIS 214
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLF 301
LPYG +D+WSLG ++ E+ G P + E ++ + I + L ++ +S R F
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGF 274
Query: 302 FD 303
D
Sbjct: 275 LD 276
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 49 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 102
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 103 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 156
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 157 SVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 217 YKRISRVEFTFPDFVTEGA 235
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 13/191 (6%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKR 160
K+ HQ E+ I HLR N++ M YF+ R + + E EL K
Sbjct: 54 EKEGVEHQLRREIEIQSHLRHP------NILRMYNYFHDRKRIYLMLEFAPRG--ELYKE 105
Query: 161 NNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC 219
G F F L L H +IH D+KPEN+L+ +G +K+ DFG S
Sbjct: 106 LQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWSV 163
Query: 220 YSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLA 278
++ R + Y PE+I G + +D+W G + E G P F + E
Sbjct: 164 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 223
Query: 279 CIMEI-LGCPP 288
I+ + L PP
Sbjct: 224 RIVNVDLKFPP 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 13/191 (6%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKR 160
K+ HQ E+ I HLR N++ M YF+ R + + E EL K
Sbjct: 53 EKEGVEHQLRREIEIQSHLRHP------NILRMYNYFHDRKRIYLMLEFAPRG--ELYKE 104
Query: 161 NNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC 219
G F F L L H +IH D+KPEN+L+ +G +K+ DFG S
Sbjct: 105 LQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWSV 162
Query: 220 YSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLA 278
++ R + Y PE+I G + +D+W G + E G P F + E
Sbjct: 163 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
Query: 279 CIMEI-LGCPP 288
I+ + L PP
Sbjct: 223 RIVNVDLKFPP 233
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 101 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 154
Query: 218 SCYSHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 155 SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 215 YKRISRVEFTFPDFVTEGA 233
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ +FG
Sbjct: 104 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIANFGW 157
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R T + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 158 SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 218 YKRISRVEFTFPDFVTEGA 236
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ FY+ N+L I E + + + + I+ + L LH
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH---QRVYTYIQSRFYRSPEVIL---- 241
IIH DLK N+L G IK+ DFG S + QR ++I + ++ +PEV++
Sbjct: 155 KIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 242 -GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
PY D+WSLG L E+ + P +E+ + +++I P
Sbjct: 213 KDRPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEP 257
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 44/240 (18%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHR 187
N++ + + + HL + +L++ EL R +GF + R F ++ ++ LH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 188 ENIIHCDLKPENVLLKQRGSSS-IKVIDFGSSCYSH--QRVYTYIQSRFYRSPEVILGLP 244
I+H DLKPEN+L S I + DFG S + T + Y +PEV+ P
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D WS+G I L G P F EN+ + I+ + FDS
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL---------------KAEYEFDS 239
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
P D++ + DF+ D +KR T ++AL+H W+
Sbjct: 240 ----------------PYWDDISDSAK-------DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 100
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 101 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 154
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 155 SVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 215 YKRISRVEFTFPDFVTEGA 233
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 44/240 (18%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHR 187
N++ + + + HL + +L++ EL R +GF + R F ++ ++ LH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 188 ENIIHCDLKPENVLLKQRGSSS-IKVIDFGSSCYSH--QRVYTYIQSRFYRSPEVILGLP 244
I+H DLKPEN+L S I + DFG S + T + Y +PEV+ P
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D WS+G I L G P F EN+ + I+ + FDS
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL---------------KAEYEFDS 239
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
P D++ + DF+ D +KR T ++AL+H W+
Sbjct: 240 ----------------PYWDDISDSAK-------DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 104 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 157
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 158 SVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 218 YKRISRVEFTFPDFVTEGA 236
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 44/240 (18%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHR 187
N++ + + + HL + +L++ EL R +GF + R F ++ ++ LH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 188 ENIIHCDLKPENVLLKQRGSSS-IKVIDFGSSCYSH--QRVYTYIQSRFYRSPEVILGLP 244
I+H DLKPEN+L S I + DFG S + T + Y +PEV+ P
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D WS+G I L G P F EN+ + I+ + FDS
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL---------------KAEYEFDS 239
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
P D++ + DF+ D +KR T ++AL+H W+
Sbjct: 240 ----------------PYWDDISDSAK-------DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 13/191 (6%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKR 160
K+ HQ E+ I HLR N++ M YF+ R + + E EL K
Sbjct: 53 EKEGVEHQLRREIEIQSHLRHP------NILRMYNYFHDRKRIYLMLEFAPRG--ELYKE 104
Query: 161 NNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC 219
G F F L L H +IH D+KPEN+L+ +G +K+ DFG S
Sbjct: 105 LQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--ELKIADFGWSV 162
Query: 220 YSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLA 278
++ R + Y PE+I G + +D+W G + E G P F + E
Sbjct: 163 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR 222
Query: 279 CIMEI-LGCPP 288
I+ + L PP
Sbjct: 223 RIVNVDLKFPP 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ FY+ N+L I E + + + + I+ + L LH
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH---QRVYTYIQSRFYRSPEVIL---- 241
IIH DLK N+L G IK+ DFG S + QR ++I + ++ +PEV++
Sbjct: 155 KIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 242 -GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
PY D+WSLG L E+ + P +E+ + +++I P
Sbjct: 213 KDRPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEP 257
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 129 NVIHMLEYF------YFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCL 182
N+I + E F Y LC EL +++ + R + R ++ +
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-------RIMKDVLSAV 119
Query: 183 RLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFGSSC--YSHQRVYTYIQSRFYRSPEV 239
H+ N+ H DLKPEN L L S +K+IDFG + + + T + + +Y SP+V
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 179
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
+ GL YGP D WS G ++ L G P F + E + I E
Sbjct: 180 LEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 221
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 129 NVIHMLEYF------YFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCL 182
N+I + E F Y LC EL +++ + R + R ++ +
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-------RIMKDVLSAV 136
Query: 183 RLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFGSSC--YSHQRVYTYIQSRFYRSPEV 239
H+ N+ H DLKPEN L L S +K+IDFG + + + T + + +Y SP+V
Sbjct: 137 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 196
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
+ GL YGP D WS G ++ L G P F + E + I E
Sbjct: 197 LEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 238
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 44/240 (18%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHR 187
N++ + + + HL + +L++ EL R +GF + R F ++ ++ LH
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGG--ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 188 ENIIHCDLKPENVLLKQRGSSS-IKVIDFGSSCYSH--QRVYTYIQSRFYRSPEVILGLP 244
I+H DLKPEN+L S I + DFG S + T + Y +PEV+ P
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 245 YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDS 304
Y +D WS+G I L G P F EN+ + I+ + FDS
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL---------------KAEYEFDS 239
Query: 305 KGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
P D++ + DF+ D +KR T ++AL+H W+
Sbjct: 240 ----------------PYWDDISDSAK-------DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL G +IK+ DFG S ++ T+ S Y
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLD--GDMNIKIADFGFSNEFTVGNKLDTFCGSPPY 179
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 53/246 (21%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+Y + +G G+FG V A+D + N + + + EK LE C I
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKK---------EKVLE-------DCWI 68
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
D + G + +E+ IL + N+I +L+ F +
Sbjct: 69 E-----------DPKLG---------KVTLEIAILSRVEHA------NIIKVLDIFENQG 102
Query: 142 HLCISFEL--MNLNLYELIKRNNYQGFSLG-LIRRFAFSLVQCLRLLHRENIIHCDLKPE 198
+ E L+L+ I R+ L I R S V LRL ++IIH D+K E
Sbjct: 103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDE 159
Query: 199 NVLLKQRGSSSIKVIDFGSSCYSH--QRVYTYIQSRFYRSPEVILGLPY-GPPIDMWSLG 255
N+++ + +IK+IDFGS+ Y + YT+ + Y +PEV++G PY GP ++MWSLG
Sbjct: 160 NIVIAE--DFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLG 217
Query: 256 CILAEL 261
L L
Sbjct: 218 VTLYTL 223
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ FY+ N+L I E + + + + I+ + L LH
Sbjct: 68 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH----QRVYTYIQSRFYRSPEVIL--- 241
IIH DLK N+L G IK+ DFG S + QR ++I + ++ +PEV++
Sbjct: 128 KIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 242 --GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
PY D+WSLG L E+ + P +E+ + +++I P
Sbjct: 186 SKDRPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEP 231
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N++ +L+ FY+ N+L I E + + + + I+ + L LH
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSH---QRVYTYIQSRFYRSPEVIL---- 241
IIH DLK N+L G IK+ DFG S + QR +I + ++ +PEV++
Sbjct: 155 KIIHRDLKAGNILFTLDG--DIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 242 -GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
PY D+WSLG L E+ + P +E+ + +++I P
Sbjct: 213 KDRPYDYKADVWSLGITLIEM---AEIEPPHHELNPMRVLLKIAKSEP 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDSTRVYLILEYAPLGTVYRELQ 100
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 101 KLSKFDEQRTATYITELANALSYC----HSKKVIHRDIKPENLLLGSAGE--LKIADFGW 154
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R + Y PE+I G + +D+WSLG + E G P F +
Sbjct: 155 SVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 215 YKRISRVEFTFPDFVTEGA 233
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + + EL
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQ 103
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 104 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 157
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 158 SVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 218 YKRISRVEFTFPDFVTEGA 236
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS---HQRVYT 227
++ + L L LH II+ DLKPEN+LL + G IK+ DFG S + ++ Y+
Sbjct: 132 VKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGLSKEAIDHEKKAYS 189
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI-LGC 286
+ + Y +PEV+ + D WS G ++ E+ TG F G++ E + I++ LG
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGM 249
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKG 316
P S R F R + G
Sbjct: 250 PQFLSTEAQSLLRALFKRNPANRLGSGPDG 279
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELIK 159
K HQ EV I HLR N++ + YF+ R +L + + + EL K
Sbjct: 74 KAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 160 RNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS 218
+ + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG S
Sbjct: 128 LSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGWS 181
Query: 219 CYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
++ R + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 182 VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 241
Query: 278 ACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 242 KRISRVEFTFPDFVTEGA 259
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 128 YNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLH 186
+NVI + + + R + + EL++ L++ + + + S F ++ + LH
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLH 132
Query: 187 RENIIHCDLKPENVLL--KQRGSSSIKVIDFGSSCYSHQRV--YTYIQSRFYRSPEVILG 242
+ I H DLKPEN++L K IK+IDFG + V + + +PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA I + +E + S
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS------ 246
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++A DF+ + +++KRLT EALRH
Sbjct: 247 ----------------------ELAK----------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 363 WL 364
W+
Sbjct: 275 WI 276
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 16/199 (8%)
Query: 101 NKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFY--FRNHLCISFELMNLNLYELI 158
K HQ EV I HLR N++ + YF+ R +L + + EL
Sbjct: 52 EKAGVEHQLRREVEIQSHLRHP------NILRLYGYFHDATRVYLILEYAPRGEVYKELQ 105
Query: 159 KRNNY-QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGS 217
K + + + + I A +L C H + +IH D+KPEN+LL G +K+ DFG
Sbjct: 106 KLSKFDEQRTATYITELANALSYC----HSKRVIHRDIKPENLLLGSAGE--LKIADFGW 159
Query: 218 SCYS-HQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQ 276
S ++ R + Y PE+I G + +D+WSLG + E G P F E
Sbjct: 160 SVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 277 LACIMEILGCPPDEVINTA 295
I + PD V A
Sbjct: 220 YKRISRVEFTFPDFVTEGA 238
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 128 YNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLH 186
+NVI + + + R + + EL++ L++ + + + S F ++ + LH
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLH 132
Query: 187 RENIIHCDLKPENVLL--KQRGSSSIKVIDFGSSCYSHQRV--YTYIQSRFYRSPEVILG 242
+ I H DLKPEN++L K IK+IDFG + V + + +PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA I + +E + S
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS------ 246
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++A DF+ + +++KRLT EALRH
Sbjct: 247 ----------------------ELAK----------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 363 WL 364
W+
Sbjct: 275 WI 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY--SHQRVYTYI 229
R SL++ + LH NI+H DLKPEN+LL + I++ DFG SC+ +++
Sbjct: 203 RSIMRSLLEAVSFLHANNIVHRDLKPENILLDD--NMQIRLSDFGFSCHLEPGEKLRELC 260
Query: 230 QSRFYRSPEVI------LGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
+ Y +PE++ YG +D+W+ G IL L G P F ++ L IME
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 128 YNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLH 186
+NVI + + + R + + EL++ L++ + + + S F ++ + LH
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLH 132
Query: 187 RENIIHCDLKPENVLL--KQRGSSSIKVIDFGSSCYSHQRV--YTYIQSRFYRSPEVILG 242
+ I H DLKPEN++L K IK+IDFG + V + + +PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA I + +E + S
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS------ 246
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++A DF+ + +++KRLT EALRH
Sbjct: 247 ----------------------ELAK----------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 363 WL 364
W+
Sbjct: 275 WI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 128 YNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLH 186
+NVI + + + R + + EL++ L++ + + + S F ++ + LH
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLH 132
Query: 187 RENIIHCDLKPENVLL--KQRGSSSIKVIDFGSSCYSHQRV--YTYIQSRFYRSPEVILG 242
+ I H DLKPEN++L K IK+IDFG + V + + +PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA I + +E + S
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS------ 246
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++A DF+ + +++KRLT EALRH
Sbjct: 247 ----------------------ELAK----------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 363 WL 364
W+
Sbjct: 275 WI 276
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 64 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 183
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLI 171
E+ +L ++ ++ + ++ ++Y L EL + +++R Y L+
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFD----RILERGVYTEKDASLV 111
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFGSSCYSHQRVY-TYI 229
+ S V + LH I+H DLKPEN+L L +S I + DFG S + T
Sbjct: 112 IQQVLSAV---KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC 168
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
+ Y +PEV+ PY +D WS+G I L G P F E E + I E
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 64 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 183
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 68 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 127
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 128 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 187
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 188 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 78 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 137
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 138 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 197
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 198 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 62 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 121
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 122 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 181
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 63 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 122
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 123 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 182
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 183 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 128 YNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLH 186
+NVI + + + R + + EL++ L++ + + + S F ++ + LH
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLH 132
Query: 187 RENIIHCDLKPENVLL--KQRGSSSIKVIDFGSSCYSHQRV--YTYIQSRFYRSPEVILG 242
+ I H DLKPEN++L K IK+IDFG + V + + +PE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNY 192
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA I + +E + S
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS------ 246
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++A DF+ + +++KRLT EALRH
Sbjct: 247 ----------------------ELAK----------DFIRKLLVKETRKRLTIQEALRHP 274
Query: 363 WL 364
W+
Sbjct: 275 WI 276
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 70 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 129
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 130 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 189
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 190 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 108 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 167
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 168 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 227
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 114 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 173
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 174 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 233
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 234 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 180 QCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG------SSCYSHQRVYTYIQSRF 233
Q L H+ IIH D+KP N+L+ ++++KV+DFG S S + I +
Sbjct: 127 QALNFSHQNGIIHRDVKPANILIS--ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEV 274
Y SPE G D++SLGC+L E+ TG P F G++ V
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 69 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 128
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 129 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 188
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 189 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSH 222
F R +A ++ L LH + II+ DLK +NVLL G K+ DFG +
Sbjct: 121 FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHC--KLADFGMCKEGICNG 178
Query: 223 QRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
T+ + Y +PE++ + YGP +D W++G +L E+ G F ENE + I+
Sbjct: 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
Query: 283 ILGCPPDEVI 292
DEV+
Sbjct: 239 ------DEVV 242
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQ 230
+A + L L + II+ DLK +NV+L G IK+ DFG + + +
Sbjct: 126 YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWDGVTTKXFCG 183
Query: 231 SRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
+ Y +PE+I PYG +D W+ G +L E+ G F GE+E E IME
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 51/266 (19%)
Query: 104 RFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNY 163
R H + E RI L+ + ++ I + Y L EL +++ R Y
Sbjct: 45 RDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYY 100
Query: 164 -QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQR-GSSSIKVIDFGSSCY- 220
+ + I++ +++ C H+ ++H DLKPEN+LL + +++K+ DFG +
Sbjct: 101 SEADASHCIQQILEAVLHC----HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV 156
Query: 221 --SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLA 278
Q + + + Y SPEV+ YG P+D+W+ G IL L G P F E++
Sbjct: 157 QGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQ----- 211
Query: 279 CIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFV 338
+L+ K + + P +K++
Sbjct: 212 -------------------HKLYQQIKAGAYDFPSPEWDTVTPEAKNL------------ 240
Query: 339 DFVTQCFNWDSKKRLTPDEALRHEWL 364
+ Q + KR+T EAL+H W+
Sbjct: 241 --INQMLTINPAKRITAHEALKHPWV 264
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 109 ALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFS 167
AL E +IL+ + +S V+ + + ++ LC+ LMN +L I GF
Sbjct: 231 ALNEKQILEKV------NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 168 LGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYT 227
+A + L LHRE I++ DLKPEN+LL G I + Q +
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+ + Y +PEV+ Y D W+LGC+L E+ G
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 109 ALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFS 167
AL E +IL+ + +S V+ + + ++ LC+ LMN +L I GF
Sbjct: 231 ALNEKQILEKV------NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 168 LGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYT 227
+A + L LHRE I++ DLKPEN+LL G I + Q +
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+ + Y +PEV+ Y D W+LGC+L E+ G
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 49/243 (20%)
Query: 125 DSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRL 184
DSSY + Y I L + +L++ + F + + + +++ L
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDY 135
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVIL 241
LH E IH D+K NVLL ++G +K+ DFG + + + T++ + F+ +PEVI
Sbjct: 136 LHSEKKIHRDIKAANVLLSEQGD--VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQ 193
Query: 242 GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLF 301
Y D+WSLG EL G PP+ + R LF
Sbjct: 194 QSAYDSKADIWSLGITAIELAK---------------------GEPPNS--DMHPMRVLF 230
Query: 302 FDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
K P + K+F +F+ C N D R T E L+H
Sbjct: 231 LIPKNNPPTLVGD------------------FTKSFKEFIDACLNKDPSFRPTAKELLKH 272
Query: 362 EWL 364
+++
Sbjct: 273 KFI 275
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 26 LEVIGKGSFGQVIRALDHKTN 46
LE IGKGSFG+V + +D++T
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQ 48
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQ 230
+A + L L + II+ DLK +NV+L G IK+ DFG + + +
Sbjct: 447 YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIWDGVTTKXFCG 504
Query: 231 SRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
+ Y +PE+I PYG +D W+ G +L E+ G F GE+E E IME
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL +IK+ DFG S ++ T+ S Y
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLD--ADMNIKIADFGFSNEFTVGGKLDTFCGSPPY 176
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 45/241 (18%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + + R + + EL++ L++ + + + S F ++ + LH
Sbjct: 76 NIITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHT 133
Query: 188 ENIIHCDLKPENVLL--KQRGSSSIKVIDFGSSCYSHQRV--YTYIQSRFYRSPEVILGL 243
+ I H DLKPEN++L K IK+IDFG + V + + +PE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 244 PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFD 303
P G DMWS+G I L +G F G+ + E LA I + +E + S
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS------- 246
Query: 304 SKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
++A DF+ + +++KRLT EALRH W
Sbjct: 247 ---------------------ELAK----------DFIRKLLVKETRKRLTIQEALRHPW 275
Query: 364 L 364
+
Sbjct: 276 I 276
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSH 222
F L +A ++ L+ LH + I++ DLK +N+LL + G IK+ DFG +
Sbjct: 116 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH--IKIADFGMCKENMLGD 173
Query: 223 QRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ + + Y +PE++LG Y +D WS G +L E+ G F G++E E I
Sbjct: 174 AKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSH 222
F L +A ++ L+ LH + I++ DLK +N+LL + G IK+ DFG +
Sbjct: 115 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGH--IKIADFGMCKENMLGD 172
Query: 223 QRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ + + Y +PE++LG Y +D WS G +L E+ G F G++E E I
Sbjct: 173 AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLI 171
EV+I L+ YN Y Y +C + E MN L +N + FS
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGE-MNRYL-----KNRVKPFSENEA 114
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC---YSHQRVYTY 228
R F ++ + LH I+H DL N+LL + + +IK+ DFG + H++ YT
Sbjct: 115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR--NMNIKIADFGLATQLKMPHEKHYTL 172
Query: 229 IQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+ Y SPE+ +G D+WSLGC+ L G P F
Sbjct: 173 CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 180 QCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG------SSCYSHQRVYTYIQSRF 233
Q L H+ IIH D+KP N+++ ++++KV+DFG S S + I +
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEV 274
Y SPE G D++SLGC+L E+ TG P F G++ V
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N++ + E F+ + H + EL+N L+E IK+ + FS LV + +H
Sbjct: 67 NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHD 124
Query: 188 ENIIHCDLKPENVLLKQRGSS-SIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVILGL 243
++H DLKPEN+L + IK+IDFG + +Q + T + Y +PE++
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQN 184
Query: 244 PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEIL 284
Y D+WSLG IL + +G F + +EI+
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ------ 223
LI + L LH + I H D+KPEN L S IK++DFG S ++
Sbjct: 169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 224 -RVYTYIQSRFYRSPEVI--LGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ T + ++ +PEV+ YGP D WS G +L L G FPG N+ + ++ +
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQV 288
Query: 281 M 281
+
Sbjct: 289 L 289
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 180 QCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG------SSCYSHQRVYTYIQSRF 233
Q L H+ IIH D+KP N+++ ++++KV+DFG S S + I +
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEV 274
Y SPE G D++SLGC+L E+ TG P F G++ V
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 180 QCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG------SSCYSHQRVYTYIQSRF 233
Q L H+ IIH D+KP N+++ ++++KV+DFG S S + I +
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEV 274
Y SPE G D++SLGC+L E+ TG P F G++ V
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 180 QCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG------SSCYSHQRVYTYIQSRF 233
Q L H+ IIH D+KP N+++ ++++KV+DFG S S + I +
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEV 274
Y SPE G D++SLGC+L E+ TG P F G++ V
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSH-QRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL +IK+ DFG S+ ++ ++ T+ S Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLD--ADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSH-QRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL +IK+ DFG S+ ++ ++ T+ S Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLD--ADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSH-QRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL +IK+ DFG S+ ++ ++ T+ S Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLD--ADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSH-QRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL +IK+ DFG S+ ++ ++ T+ S Y
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLD--ADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 171
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 62 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 121
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + +
Sbjct: 122 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTP 181
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 47/243 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVI + E + + + + EL+ L++ + + + F ++ + LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 ENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEVILG 242
I H DLKPEN++L R IK+IDFG + + ++ + F +PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEIVNY 191
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA + +N F
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDEYFS 242
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++ + DF+ + D KKR+T ++L+H
Sbjct: 243 NTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 363 WLK 365
W+K
Sbjct: 274 WIK 276
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 51/259 (19%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGL 170
EV IL +R N+I + + F + + + EL++ L++ + + +
Sbjct: 58 EVNILREIRHP------NIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDE 109
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLL--KQRGSSSIKVIDFGSS--CYSHQRVY 226
+F ++ + LH + I H DLKPEN++L K + IK+IDFG + +
Sbjct: 110 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 169
Query: 227 TYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGC 286
+ + +PE++ P G DMWS+G I L +G F GE + E L I +
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 229
Query: 287 PPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFN 346
+E + S ++A DF+ +
Sbjct: 230 FDEEYFSNTS----------------------------ELAK----------DFIRRLLV 251
Query: 347 WDSKKRLTPDEALRHEWLK 365
D K+R+T ++L H W+K
Sbjct: 252 KDPKRRMTIAQSLEHSWIK 270
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
++E+ IL D Y ++ +L +Y L I E + I +G +
Sbjct: 56 IVEIEIL-----ATCDHPY-IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP 109
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC---YSHQRVY 226
I+ +++ L LH + IIH DLK NVL+ G I++ DFG S + Q+
Sbjct: 110 QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG--DIRLADFGVSAKNLKTLQKRD 167
Query: 227 TYIQSRFYRSPEVIL-----GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIM 281
++I + ++ +PEV++ PY D+WSLG L E+ + P +E+ + ++
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM---AQIEPPHHELNPMRVLL 224
Query: 282 EILGCPPDEVINTASRRRLFFD 303
+I P ++ + F D
Sbjct: 225 KIAKSDPPTLLTPSKWSVEFRD 246
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
++E+ IL D Y ++ +L +Y L I E + I +G +
Sbjct: 64 IVEIEIL-----ATCDHPY-IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP 117
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC---YSHQRVY 226
I+ +++ L LH + IIH DLK NVL+ G I++ DFG S + Q+
Sbjct: 118 QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG--DIRLADFGVSAKNLKTLQKRD 175
Query: 227 TYIQSRFYRSPEVIL-----GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIM 281
++I + ++ +PEV++ PY D+WSLG L E+ + P +E+ + ++
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM---AQIEPPHHELNPMRVLL 232
Query: 282 EILGCPPDEVINTASRRRLFFD 303
+I P ++ + F D
Sbjct: 233 KIAKSDPPTLLTPSKWSVEFRD 254
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 44/186 (23%)
Query: 185 LHRENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEV 239
LH I H DLKPEN++L R IK+IDFG + + ++ + F +PE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEI 188
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
+ P G DMWS+G I L +G F G+ + E LA + +N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDE 239
Query: 300 LFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEAL 359
F ++ + DF+ + D KKR+T ++L
Sbjct: 240 YFSNTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSL 270
Query: 360 RHEWLK 365
+H W+K
Sbjct: 271 QHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 47/243 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVI + E + + + + EL+ L++ + + + F ++ + LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 ENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEVILG 242
I H DLKPEN++L R IK+IDFG + + ++ + F +PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEIVNY 191
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA + +N F
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDEYFS 242
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++ + DF+ + D KKR+T ++L+H
Sbjct: 243 NTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 363 WLK 365
W+K
Sbjct: 274 WIK 276
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 180 QCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG------SSCYSHQRVYTYIQSRF 233
Q L H+ IIH D+KP N+++ ++++KV+DFG S S + I +
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGEN 272
Y SPE G D++SLGC+L E+ TG P F G++
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 47/243 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVI + E + + + + EL+ L++ + + + F ++ + LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 ENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEVILG 242
I H DLKPEN++L R IK+IDFG + + ++ + F +PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEIVNY 191
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA + +N F
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDEYFS 242
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++ + DF+ + D KKR+T ++L+H
Sbjct: 243 NTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 363 WLK 365
W+K
Sbjct: 274 WIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 47/243 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVI + E + + + + EL+ L++ + + + F ++ + LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 ENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEVILG 242
I H DLKPEN++L R IK+IDFG + + ++ + F +PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEIVNY 191
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA + +N F
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDEYFS 242
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++ + DF+ + D KKR+T ++L+H
Sbjct: 243 NTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 363 WLK 365
W+K
Sbjct: 274 WIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 47/243 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVI + E + + + + EL+ L++ + + + F ++ + LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 ENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEVILG 242
I H DLKPEN++L R IK+IDFG + + ++ + F +PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEIVNY 191
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA + +N F
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDEYFS 242
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++ + DF+ + D KKR+T ++L+H
Sbjct: 243 NTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 363 WLK 365
W+K
Sbjct: 274 WIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 47/243 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVI + E + + + + EL+ L++ + + + F ++ + LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 ENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEVILG 242
I H DLKPEN++L R IK+IDFG + + ++ + F +PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEIVNY 191
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA + +N F
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDEYFS 242
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++ + DF+ + D KKR+T ++L+H
Sbjct: 243 NTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 363 WLK 365
W+K
Sbjct: 274 WIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 47/243 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVI + E + + + + EL+ L++ + + + F ++ + LH
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS 131
Query: 188 ENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEVILG 242
I H DLKPEN++L R IK+IDFG + + ++ + F +PE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEIVNY 190
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA + +N F
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDEYFS 241
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++ + DF+ + D KKR+T ++L+H
Sbjct: 242 NTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 363 WLK 365
W+K
Sbjct: 273 WIK 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 44/197 (22%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTY 228
F ++ + LH I H DLKPEN++L R IK+IDFG + + ++ +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF 178
Query: 229 IQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
F +PE++ P G DMWS+G I L +G F G+ + E LA +
Sbjct: 179 GTPEFV-APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 289 DEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWD 348
+N F ++ + DF+ + D
Sbjct: 230 -SAVNYEFEDEYFSNTSALAK-----------------------------DFIRRLLVKD 259
Query: 349 SKKRLTPDEALRHEWLK 365
KKR+T ++L+H W+K
Sbjct: 260 PKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 47/243 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVI + E + + + + EL+ L++ + + + F ++ + LH
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS 131
Query: 188 ENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEVILG 242
I H DLKPEN++L R IK+IDFG + + ++ + F +PE++
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEIVNY 190
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA + +N F
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDEYFS 241
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++ + DF+ + D KKR+T ++L+H
Sbjct: 242 NTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 363 WLK 365
W+K
Sbjct: 273 WIK 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 47/243 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVI + E + + + + EL+ L++ + + + F ++ + LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 ENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEVILG 242
I H DLKPEN++L R IK+IDFG + + ++ + F +PE++
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEIVNY 191
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFF 302
P G DMWS+G I L +G F G+ + E LA + +N F
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDEYFS 242
Query: 303 DSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHE 362
++ + DF+ + D KKR+T ++L+H
Sbjct: 243 NTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 363 WLK 365
W+K
Sbjct: 274 WIK 276
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRG-SSSIKVIDFGSS--CYSHQRVYTYIQSRFY 234
+++ + H I+H +LKPEN+LL + +++K+ DFG + + + + + Y
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 196
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENE 273
SPEV+ PY P+D+W+ G IL L G P F E++
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 235
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 48/188 (25%)
Query: 185 LHRENIIHCDLKPENVLLKQRG--SSSIKVIDFGSSCYSHQ-----RVYTYIQSRFYRSP 237
LH I H DLKPEN++L R IK+IDFG +H+ + + +P
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG---LAHKIDFGNEFKNIFGTPAFVAP 186
Query: 238 EVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASR 297
E++ P G DMWS+G I L +G F G+ + E LA + +N
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFE 237
Query: 298 RRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDE 357
F ++ + DF+ + D KKR+T +
Sbjct: 238 DEYFSNTSALAK-----------------------------DFIRRLLVKDPKKRMTIQD 268
Query: 358 ALRHEWLK 365
+L+H W+K
Sbjct: 269 SLQHPWIK 276
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRG-SSSIKVIDFGSS--CYSHQRVYTYIQSRFY 234
+++ + H I+H +LKPEN+LL + +++K+ DFG + + + + + Y
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENE 273
SPEV+ PY P+D+W+ G IL L G P F E++
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 212
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNY-QGFSLGL 170
E RI L+ + ++ I + Y L EL +++ R Y + +
Sbjct: 55 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHC 110
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRG-SSSIKVIDFGSS--CYSHQRVYT 227
I++ S+ C H I+H +LKPEN+LL + +++K+ DFG + + +
Sbjct: 111 IQQILESIAYC----HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 166
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENE 273
+ + Y SPEV+ PY P+D+W+ G IL L G P F E++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 212
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 105/265 (39%), Gaps = 60/265 (22%)
Query: 122 KDADSSYNVIHMLEYFYFRNHLCI--------------SFELMNLN-LYELIKRNNYQGF 166
++AD + NV +E NH CI ELM L++ + N +
Sbjct: 60 READPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRL 117
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL-KQRGSSSIKVIDFGSSCYSHQR- 224
+ + + ++ ++ LH IIH DLKPENVLL Q IK+ DFG S +
Sbjct: 118 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 177
Query: 225 -VYTYIQSRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ T + Y +PEV++ + Y +D WSLG IL +G P F
Sbjct: 178 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF------------ 225
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDF 340
+ R ++ + IT+ K + V + +D
Sbjct: 226 -------------SEHRTQVSLKDQ-----ITSGK-------YNFIPEVWAEVSEKALDL 260
Query: 341 VTQCFNWDSKKRLTPDEALRHEWLK 365
V + D K R T +EALRH WL+
Sbjct: 261 VKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 98/246 (39%), Gaps = 56/246 (22%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTH-ALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
Y I E +G+GSFG+V A +KT ALK+ QL + + EI YL
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL------- 63
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
K H +I++ Y+VI
Sbjct: 64 ---------------------KLLRHPHIIKL--------------YDVITT------PT 82
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
+ + E L++ I G RRF ++ + HR I+H DLKPEN+L
Sbjct: 83 DIVMVIEYAGGELFDYIVEKKRMTEDEG--RRFFQQIICAIEYCHRHKIVHRDLKPENLL 140
Query: 202 LKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRFYRSPEVILGLPY-GPPIDMWSLGCIL 258
L + ++K+ DFG S + T S Y +PEVI G Y GP +D+WS G +L
Sbjct: 141 LDD--NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198
Query: 259 AELYTG 264
+ G
Sbjct: 199 YVMLVG 204
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 46/190 (24%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRFY 234
+++ L LH E IH D+K NVLL ++G +K+ DFG + + + ++ + F+
Sbjct: 125 ILKGLDYLHSERKIHRDIKAANVLLSEQGD--VKLADFGVAGQLTDTQIKRNXFVGTPFW 182
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINT 294
+PEVI Y D+WSLG EL G P P+ ++
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEP---------------------PNSDLHP 221
Query: 295 ASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLT 354
R LF K +P + +G+ KP F +FV C N D + R T
Sbjct: 222 M--RVLFLIPKNSPPTL---EGQHSKP---------------FKEFVEACLNKDPRFRPT 261
Query: 355 PDEALRHEWL 364
E L+H+++
Sbjct: 262 AKELLKHKFI 271
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 44/198 (22%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYT 227
F ++ + LH I H DLKPEN++L R IK+IDFG + + ++
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCP 287
+ F +PE++ P G DMWS+G I L +G F G+ + E LA +
Sbjct: 178 FGTPEFV-APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV------- 229
Query: 288 PDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNW 347
+N F ++ + DF+ +
Sbjct: 230 --SAVNYEFEDEYFSNTSALAK-----------------------------DFIRRLLVK 258
Query: 348 DSKKRLTPDEALRHEWLK 365
D KKR+T ++L+H W+K
Sbjct: 259 DPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 44/186 (23%)
Query: 185 LHRENIIHCDLKPENVLLKQRG--SSSIKVIDFGSS---CYSHQRVYTYIQSRFYRSPEV 239
LH I H DLKPEN++L R IK+IDFG + + ++ + F +PE+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV-APEI 188
Query: 240 ILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRR 299
+ P G DMWS+G I L +G F G+ + E LA + +N
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---------SAVNYEFEDE 239
Query: 300 LFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEAL 359
F ++ + DF+ + D KKR+T ++L
Sbjct: 240 YFSNTSALAK-----------------------------DFIRRLLVKDPKKRMTIQDSL 270
Query: 360 RHEWLK 365
+H W+K
Sbjct: 271 QHPWIK 276
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNY-QGFSLGL 170
E RI L+ + ++ I + Y L EL +++ R Y + +
Sbjct: 54 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHC 109
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRG-SSSIKVIDFGSS--CYSHQRVYT 227
I++ S+ C H I+H +LKPEN+LL + +++K+ DFG + + +
Sbjct: 110 IQQILESIAYC----HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 165
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENE 273
+ + Y SPEV+ PY P+D+W+ G IL L G P F E++
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ 211
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 105/265 (39%), Gaps = 60/265 (22%)
Query: 122 KDADSSYNVIHMLEYFYFRNHLCI--------------SFELMNLN-LYELIKRNNYQGF 166
++AD + NV +E NH CI ELM L++ + N +
Sbjct: 54 READPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRL 111
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL-KQRGSSSIKVIDFGSSCYSHQR- 224
+ + + ++ ++ LH IIH DLKPENVLL Q IK+ DFG S +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 225 -VYTYIQSRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ T + Y +PEV++ + Y +D WSLG IL +G P F
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF------------ 219
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDF 340
+ R ++ + IT+ K + V + +D
Sbjct: 220 -------------SEHRTQVSLKDQ-----ITSGK-------YNFIPEVWAEVSEKALDL 254
Query: 341 VTQCFNWDSKKRLTPDEALRHEWLK 365
V + D K R T +EALRH WL+
Sbjct: 255 VKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 105/265 (39%), Gaps = 60/265 (22%)
Query: 122 KDADSSYNVIHMLEYFYFRNHLCI--------------SFELMNLN-LYELIKRNNYQGF 166
++AD + NV +E NH CI ELM L++ + N +
Sbjct: 53 READPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRL 110
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL-KQRGSSSIKVIDFGSSCYSHQR- 224
+ + + ++ ++ LH IIH DLKPENVLL Q IK+ DFG S +
Sbjct: 111 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 170
Query: 225 -VYTYIQSRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ T + Y +PEV++ + Y +D WSLG IL +G P F
Sbjct: 171 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF------------ 218
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDF 340
+ R ++ + IT+ K + V + +D
Sbjct: 219 -------------SEHRTQVSLKDQ-----ITSGK-------YNFIPEVWAEVSEKALDL 253
Query: 341 VTQCFNWDSKKRLTPDEALRHEWLK 365
V + D K R T +EALRH WL+
Sbjct: 254 VKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 105/265 (39%), Gaps = 60/265 (22%)
Query: 122 KDADSSYNVIHMLEYFYFRNHLCI--------------SFELMNLN-LYELIKRNNYQGF 166
++AD + NV +E NH CI ELM L++ + N +
Sbjct: 54 READPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRL 111
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL-KQRGSSSIKVIDFGSSCYSHQR- 224
+ + + ++ ++ LH IIH DLKPENVLL Q IK+ DFG S +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 225 -VYTYIQSRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ T + Y +PEV++ + Y +D WSLG IL +G P F
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF------------ 219
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDF 340
+ R ++ + IT+ K + V + +D
Sbjct: 220 -------------SEHRTQVSLKDQ-----ITSGK-------YNFIPEVWAEVSEKALDL 254
Query: 341 VTQCFNWDSKKRLTPDEALRHEWLK 365
V + D K R T +EALRH WL+
Sbjct: 255 VKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS---CYSHQRVYTYIQ 230
+ +++ L+ LH I+H D+K +NVL+ S +K+ DFG+S + T+
Sbjct: 127 YTKQILEGLKYLHDNQIVHRDIKGDNVLINTY-SGVLKISDFGTSKRLAGINPCTETFTG 185
Query: 231 SRFYRSPEVILGLP--YGPPIDMWSLGCILAELYTGCPLF 268
+ Y +PE+I P YG D+WSLGC + E+ TG P F
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 105/265 (39%), Gaps = 60/265 (22%)
Query: 122 KDADSSYNVIHMLEYFYFRNHLCI--------------SFELMNLN-LYELIKRNNYQGF 166
++AD + NV +E NH CI ELM L++ + N +
Sbjct: 54 READPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRL 111
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL-KQRGSSSIKVIDFGSSCYSHQR- 224
+ + + ++ ++ LH IIH DLKPENVLL Q IK+ DFG S +
Sbjct: 112 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 171
Query: 225 -VYTYIQSRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ T + Y +PEV++ + Y +D WSLG IL +G P F
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF------------ 219
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDF 340
+ R ++ + IT+ K + V + +D
Sbjct: 220 -------------SEHRTQVSLKDQ-----ITSGK-------YNFIPEVWAEVSEKALDL 254
Query: 341 VTQCFNWDSKKRLTPDEALRHEWLK 365
V + D K R T +EALRH WL+
Sbjct: 255 VKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 98/245 (40%), Gaps = 50/245 (20%)
Query: 129 NVIHMLEYFYFRNHLCISFEL-MNLNLYELIKRNNYQGFSL--GLIRRFAFSLVQCLRLL 185
N+I + E F +++ I E L E I +G +L G + ++ L
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 186 HRENIIHCDLKPENVLLKQRGS-SSIKVIDFGSS--CYSHQRVYTYIQSRFYRSPEVILG 242
H ++++H DLKPEN+L + S IK+IDFG + S + + Y +PEV
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV-FK 199
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGEN--EVEQLACIMEILGCPPDEVINTASRRRL 300
D+WS G ++ L TGC F G + EV+Q A E P+ + R L
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE-----PNYAVEC---RPL 251
Query: 301 FFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALR 360
TP+ VD + Q D ++R + + L
Sbjct: 252 ------TPQA---------------------------VDLLKQMLTKDPERRPSAAQVLH 278
Query: 361 HEWLK 365
HEW K
Sbjct: 279 HEWFK 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS---CYSHQRVYTYIQSRFY 234
+++ L+ LH I+H D+K +NVL+ S +K+ DFG+S + T+ + Y
Sbjct: 117 ILEGLKYLHDNQIVHRDIKGDNVLINTY-SGVLKISDFGTSKRLAGINPCTETFTGTLQY 175
Query: 235 RSPEVILGLP--YGPPIDMWSLGCILAELYTGCPLF 268
+PE+I P YG D+WSLGC + E+ TG P F
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGL 170
EV IL +R N+I + + F + + + EL++ L++ + + +
Sbjct: 65 EVNILREIRHP------NIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDE 116
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLL--KQRGSSSIKVIDFGSS--CYSHQRVY 226
+F ++ + LH + I H DLKPEN++L K + IK+IDFG + +
Sbjct: 117 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 176
Query: 227 TYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI 283
+ + +PE++ P G DMWS+G I L +G F GE + E L I +
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL +IK+ DFG S ++ + + Y
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLD--ADMNIKIADFGFSNEFTVGGKLDAFCGAPPY 179
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGL 170
EV IL +R N+I + + F + + + EL++ L++ + + +
Sbjct: 79 EVNILREIRHP------NIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDE 130
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLL--KQRGSSSIKVIDFGSS--CYSHQRVY 226
+F ++ + LH + I H DLKPEN++L K + IK+IDFG + +
Sbjct: 131 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 190
Query: 227 TYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI 283
+ + +PE++ P G DMWS+G I L +G F GE + E L I +
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 247
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 108 HWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIX 167
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSR 232
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG SH + T +
Sbjct: 168 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 227
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+Y +PEV+ Y D WSLG I L G P F
Sbjct: 228 YYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYI 229
RRF ++ + HR I+H DLKPEN+LL + ++K+ DFG S + T
Sbjct: 115 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH--LNVKIADFGLSNIMTDGNFLKTSC 172
Query: 230 QSRFYRSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENE 273
S Y +PEVI G Y GP +D+WS G IL + C P ++E
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML--CRRLPFDDE 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYI 229
RRF ++ + HR I+H DLKPEN+LL + ++K+ DFG S + T
Sbjct: 116 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH--LNVKIADFGLSNIMTDGNFLKTSC 173
Query: 230 QSRFYRSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENE 273
S Y +PEVI G Y GP +D+WS G IL + C P ++E
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML--CRRLPFDDE 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSH-QRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL +IK+ DFG S+ ++ ++ + S Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLD--ADMNIKIADFGFSNEFTFGNKLDEFCGSPPY 178
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSH-QRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL +IK+ DFG S+ ++ ++ + + Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLD--ADXNIKIADFGFSNEFTFGNKLDAFCGAPPY 178
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 106/268 (39%), Gaps = 51/268 (19%)
Query: 15 LHDHICYRYEILEVIGKGSFGQVIRALDHKTNTH-ALKYYGNQLTEFERTEIEKYLEIWY 73
L C +E+ E +G G FG V+R + T A+K +L+ R E W
Sbjct: 8 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR-------ERWC 60
Query: 74 LGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHM 133
L + K + +H ++ R + +K A + ++ M
Sbjct: 61 LEIQIMK-----------------------KLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97
Query: 134 LEYFYFRNHLCISFELMN-LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIH 192
EY C +L LN +E N G G IR + LR LH IIH
Sbjct: 98 -EY-------CEGGDLRKYLNQFE-----NCCGLKEGPIRTLLSDISSALRYLHENRIIH 144
Query: 193 CDLKPENVLLKQRGSSSI--KVIDFGSSCYSHQR--VYTYIQSRFYRSPEVILGLPYGPP 248
DLKPEN++L Q G + K+ID G + Q ++ + Y +PE++ Y
Sbjct: 145 RDLKPENIVL-QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 203
Query: 249 IDMWSLGCILAELYTGC-PLFPGENEVE 275
+D WS G + E TG P P V+
Sbjct: 204 VDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYI 229
RRF ++ + HR I+H DLKPEN+LL + ++K+ DFG S + T
Sbjct: 106 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH--LNVKIADFGLSNIMTDGNFLKTSC 163
Query: 230 QSRFYRSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENE 273
S Y +PEVI G Y GP +D+WS G IL + C P ++E
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML--CRRLPFDDE 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYI 229
RRF ++ + HR I+H DLKPEN+LL + ++K+ DFG S + T
Sbjct: 110 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH--LNVKIADFGLSNIMTDGNFLKTSC 167
Query: 230 QSRFYRSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENE 273
S Y +PEVI G Y GP +D+WS G IL + C P ++E
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML--CRRLPFDDE 210
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 106/268 (39%), Gaps = 51/268 (19%)
Query: 15 LHDHICYRYEILEVIGKGSFGQVIRALDHKTNTH-ALKYYGNQLTEFERTEIEKYLEIWY 73
L C +E+ E +G G FG V+R + T A+K +L+ R E W
Sbjct: 9 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR-------ERWC 61
Query: 74 LGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHM 133
L + K + +H ++ R + +K A + ++ M
Sbjct: 62 LEIQIMK-----------------------KLNHPNVVSAREVPDGLQKLAPNDLPLLAM 98
Query: 134 LEYFYFRNHLCISFELMN-LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIH 192
EY C +L LN +E N G G IR + LR LH IIH
Sbjct: 99 -EY-------CEGGDLRKYLNQFE-----NCCGLKEGPIRTLLSDISSALRYLHENRIIH 145
Query: 193 CDLKPENVLLKQRGSSSI--KVIDFGSSCYSHQR--VYTYIQSRFYRSPEVILGLPYGPP 248
DLKPEN++L Q G + K+ID G + Q ++ + Y +PE++ Y
Sbjct: 146 RDLKPENIVL-QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVT 204
Query: 249 IDMWSLGCILAELYTGC-PLFPGENEVE 275
+D WS G + E TG P P V+
Sbjct: 205 VDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSH-QRVYTYIQSRFY 234
+V ++ H++ I+H DLK EN+LL +IK+ DFG S+ ++ ++ + + Y
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLD--ADMNIKIADFGFSNEFTFGNKLDAFCGAPPY 178
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
+PE+ G Y GP +D+WSLG IL L +G F G+N
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 105/265 (39%), Gaps = 60/265 (22%)
Query: 122 KDADSSYNVIHMLEYFYFRNHLCI--------------SFELMNLN-LYELIKRNNYQGF 166
++AD + NV +E NH CI ELM L++ + N +
Sbjct: 193 READPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRL 250
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL-KQRGSSSIKVIDFGSSCYSHQR- 224
+ + + ++ ++ LH IIH DLKPENVLL Q IK+ DFG S +
Sbjct: 251 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 310
Query: 225 -VYTYIQSRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ T + Y +PEV++ + Y +D WSLG IL +G P F
Sbjct: 311 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF------------ 358
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDF 340
+ R ++ + IT+ K + V + +D
Sbjct: 359 -------------SEHRTQVSLKDQ-----ITSGK-------YNFIPEVWAEVSEKALDL 393
Query: 341 VTQCFNWDSKKRLTPDEALRHEWLK 365
V + D K R T +EALRH WL+
Sbjct: 394 VKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 105/265 (39%), Gaps = 60/265 (22%)
Query: 122 KDADSSYNVIHMLEYFYFRNHLCI--------------SFELMNLN-LYELIKRNNYQGF 166
++AD + NV +E NH CI ELM L++ + N +
Sbjct: 179 READPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRL 236
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL-KQRGSSSIKVIDFGSSCYSHQR- 224
+ + + ++ ++ LH IIH DLKPENVLL Q IK+ DFG S +
Sbjct: 237 KEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 296
Query: 225 -VYTYIQSRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ T + Y +PEV++ + Y +D WSLG IL +G P F
Sbjct: 297 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF------------ 344
Query: 281 MEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDF 340
+ R ++ + IT+ K + V + +D
Sbjct: 345 -------------SEHRTQVSLKDQ-----ITSGK-------YNFIPEVWAEVSEKALDL 379
Query: 341 VTQCFNWDSKKRLTPDEALRHEWLK 365
V + D K R T +EALRH WL+
Sbjct: 380 VKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 98/237 (41%), Gaps = 50/237 (21%)
Query: 137 FYFRNHLCISFELMNLNLYELIKR--NNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHC 193
+ + I ELM+ +L + K+ + Q ++ + A S+V+ L LH + ++IH
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 178
Query: 194 DLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS--RFYRSPEVI----LGLPYGP 247
D+KP NVL+ G +K+ DFG S Y V I + + Y +PE I Y
Sbjct: 179 DVKPSNVLINALG--QVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSV 236
Query: 248 PIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGT 307
D+WSLG + EL IL R +DS GT
Sbjct: 237 KSDIWSLGITMIEL--------------------AIL--------------RFPYDSWGT 262
Query: 308 PRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
P K +P + A FVDF +QC +SK+R T E ++H +
Sbjct: 263 P--FQQLKQVVEEPSPQLPADKFSAE---FVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 17/112 (15%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHREN-----IIHCDLKPENVLLKQRGSSSIKVIDFG-SSC 219
F L ++ + +L +C HR + ++H DLKP NV L G ++K+ DFG +
Sbjct: 112 FVLRVMTQLTLALKEC----HRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLARI 165
Query: 220 YSHQRVY--TYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFP 269
+H + T++ + +Y SPE + + Y D+WSLGC+L EL C L P
Sbjct: 166 LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL---CALMP 214
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 23/132 (17%)
Query: 148 ELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHREN--IIHCDLKPENVLLKQ 204
EL L E +K+ +G S + + + + ++ +HR+ IIH DLK EN+LL
Sbjct: 114 ELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN 173
Query: 205 RGSSSIKVIDFGS-SCYSHQRVYTYIQSR--------------FYRSPEVI---LGLPYG 246
+G +IK+ DFGS + SH Y++ R YR+PE+I P G
Sbjct: 174 QG--TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG 231
Query: 247 PPIDMWSLGCIL 258
D+W+LGCIL
Sbjct: 232 EKQDIWALGCIL 243
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 99/245 (40%), Gaps = 29/245 (11%)
Query: 124 ADSSYNVIHMLEYFYFRNH----LCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSL 178
A +++ +L+ + +H L I E M L+ I+ Q F+ +
Sbjct: 78 ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSI-KVIDFGSSCYSHQR-VYTYIQSRFYRS 236
++ LH NI H D+KPEN+L + ++ K+ DFG + + Q + T + +Y +
Sbjct: 138 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVA 197
Query: 237 PEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTAS 296
PEV+ Y DMWSLG I+ L G P F + I+
Sbjct: 198 PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT----------------GQAISPGM 241
Query: 297 RRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFN--WDSKKRLT 354
+RR+ G P N + + +K + +L D +TQ N W ++ +
Sbjct: 242 KRRIRLGQYGFP----NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVV 297
Query: 355 PDEAL 359
P L
Sbjct: 298 PQTPL 302
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 24/211 (11%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSI-K 211
L+ I+ Q F+ + ++ LH NI H D+KPEN+L + ++ K
Sbjct: 93 ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLK 152
Query: 212 VIDFGSSCYSHQR-VYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPG 270
+ DFG + + Q + T + +Y +PEV+ Y DMWSLG I+ L G P F
Sbjct: 153 LTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 212
Query: 271 ENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVL 330
+ I+ +RR+ G P N + + +K + +L
Sbjct: 213 NT----------------GQAISPGMKRRIRLGQYGFP----NPEWSEVSEDAKQLIRLL 252
Query: 331 RCNDKAFVDFVTQCFN--WDSKKRLTPDEAL 359
D +TQ N W ++ + P L
Sbjct: 253 LKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 50/234 (21%)
Query: 137 FYFRNHLCISFELMNLNLYELIKR--NNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHC 193
+ + I ELM+ +L + K+ + Q ++ + A S+V+ L LH + ++IH
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134
Query: 194 DLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS--RFYRSPEVI----LGLPYGP 247
D+KP NVL+ G +K+ DFG S Y V I + + Y +PE I Y
Sbjct: 135 DVKPSNVLINALG--QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSV 192
Query: 248 PIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGT 307
D+WSLG + EL IL P +DS GT
Sbjct: 193 KSDIWSLGITMIEL--------------------AILRFP--------------YDSWGT 218
Query: 308 PRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
P K +P + A FVDF +QC +SK+R T E ++H
Sbjct: 219 P--FQQLKQVVEEPSPQLPADKFSAE---FVDFTSQCLKKNSKERPTYPELMQH 267
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYI 229
RR ++ + HR ++H DLKPENVLL ++ K+ DFG S + + T
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRTSC 171
Query: 230 QSRFYRSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
S Y +PEVI G Y GP +D+WS G IL L G F E+
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 106 HHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMN-----LNLYELIKR 160
+ A++E +IL + S ++ + F + LC+ +MN ++Y + +
Sbjct: 229 YQGAMVEKKILAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY 220
N GF + +V L LH+ NII+ DLKPENVLL G+ I +
Sbjct: 283 NP--GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 221 SHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAEL 261
+ Q + Y + + +PE++LG Y +D ++LG L E+
Sbjct: 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 106 HHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMN-----LNLYELIKR 160
+ A++E +IL + S ++ + F + LC+ +MN ++Y + +
Sbjct: 229 YQGAMVEKKILAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY 220
N GF + +V L LH+ NII+ DLKPENVLL G+ I +
Sbjct: 283 NP--GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 221 SHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAEL 261
+ Q + Y + + +PE++LG Y +D ++LG L E+
Sbjct: 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGS-SSIKVIDFG----------SSCYSHQRVY 226
+ L LH + I H DLKPEN+L + S +K+ DFG S S +
Sbjct: 120 VASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELL 179
Query: 227 TYIQSRFYRSPEVILGLP-----YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIM 281
T S Y +PEV+ Y D+WSLG IL L +G P F G +
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD------ 233
Query: 282 EILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
C D + + + F+S +G+ P KD A + C K D +
Sbjct: 234 ----CGWDRGEACPACQNMLFESI--------QEGKYEFP-DKDWAHI-SCAAK---DLI 276
Query: 342 TQCFNWDSKKRLTPDEALRHEWLK 365
++ D+K+RL+ + L+H W++
Sbjct: 277 SKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 59/272 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
+E L+++GKG+FG+VI + T +YY A KI
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATG----RYY------------------------AMKIL 181
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H L E R+L +S + + L+Y F +
Sbjct: 182 KKEVI------------VAKDEVAH-TLTENRVLQ-------NSRHPFLTALKYSFQTHD 221
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHCDLKPEN 199
LC E N L+ + R FS R + +V L LH E N+++ DLK EN
Sbjct: 222 RLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 279
Query: 200 VLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGC 256
++L + G IK+ DFG + T+ + Y +PEV+ YG +D W LG
Sbjct: 280 LMLDKDGH--IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 337
Query: 257 ILAELYTG-CPLFPGENEVEQLACIMEILGCP 287
++ E+ G P + ++E +ME + P
Sbjct: 338 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 369
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 106 HHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMN-----LNLYELIKR 160
+ A++E +IL + S ++ + F + LC+ +MN ++Y + +
Sbjct: 229 YQGAMVEKKILAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY 220
N GF + +V L LH+ NII+ DLKPENVLL G+ I +
Sbjct: 283 NP--GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 221 SHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAEL 261
+ Q + Y + + +PE++LG Y +D ++LG L E+
Sbjct: 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E M +L++ I L R F +
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARSFFW 121
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 179
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 59/272 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
+E L+++GKG+FG+VI + T +YY A KI
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATG----RYY------------------------AMKIL 184
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H L E R+L +S + + L+Y F +
Sbjct: 185 KKEVI------------VAKDEVAH-TLTENRVLQ-------NSRHPFLTALKYSFQTHD 224
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHCDLKPEN 199
LC E N L+ + R FS R + +V L LH E N+++ DLK EN
Sbjct: 225 RLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 282
Query: 200 VLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGC 256
++L + G IK+ DFG + T+ + Y +PEV+ YG +D W LG
Sbjct: 283 LMLDKDGH--IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 340
Query: 257 ILAELYTG-CPLFPGENEVEQLACIMEILGCP 287
++ E+ G P + ++E +ME + P
Sbjct: 341 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 372
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 106 HHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMN-----LNLYELIKR 160
+ A++E +IL + S ++ + F + LC+ +MN ++Y + +
Sbjct: 229 YQGAMVEKKILAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY 220
N GF + +V L LH+ NII+ DLKPENVLL G+ I +
Sbjct: 283 NP--GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 221 SHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAEL 261
+ Q + Y + + +PE++LG Y +D ++LG L E+
Sbjct: 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC-YSHQR 224
FS +R +A ++ L +H +++ DLKP N+LL + G +++ D G +C +S ++
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLACDFSKKK 346
Query: 225 VYTYIQSRFYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGCPLF-----PGENEVEQLA 278
+ + + Y +PEV+ G+ Y D +SLGC+L +L G F ++E++++
Sbjct: 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406
Query: 279 CIMEI 283
M +
Sbjct: 407 LTMAV 411
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC-YSHQR 224
FS +R +A ++ L +H +++ DLKP N+LL + G +++ D G +C +S ++
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLACDFSKKK 345
Query: 225 VYTYIQSRFYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGCPLF-----PGENEVEQLA 278
+ + + Y +PEV+ G+ Y D +SLGC+L +L G F ++E++++
Sbjct: 346 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 405
Query: 279 CIMEI 283
M +
Sbjct: 406 LTMAV 410
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC-YSHQR 224
FS +R +A ++ L +H +++ DLKP N+LL + G +++ D G +C +S ++
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLACDFSKKK 346
Query: 225 VYTYIQSRFYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGCPLF-----PGENEVEQLA 278
+ + + Y +PEV+ G+ Y D +SLGC+L +L G F ++E++++
Sbjct: 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406
Query: 279 CIMEI 283
M +
Sbjct: 407 LTMAV 411
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC-YSHQR 224
FS +R +A ++ L +H +++ DLKP N+LL + G +++ D G +C +S ++
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLACDFSKKK 346
Query: 225 VYTYIQSRFYRSPEVIL-GLPYGPPIDMWSLGCILAELYTGCPLF-----PGENEVEQLA 278
+ + + Y +PEV+ G+ Y D +SLGC+L +L G F ++E++++
Sbjct: 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406
Query: 279 CIMEI 283
M +
Sbjct: 407 LTMAV 411
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 17/112 (15%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHREN-----IIHCDLKPENVLLKQRGSSSIKVIDFG-SSC 219
F L ++ + +L +C HR + ++H DLKP NV L G ++K+ DFG +
Sbjct: 112 FVLRVMTQLTLALKEC----HRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLARI 165
Query: 220 YSHQRVYT--YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFP 269
+H + ++ + +Y SPE + + Y D+WSLGC+L EL C L P
Sbjct: 166 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL---CALMP 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 17/114 (14%)
Query: 164 QGFSLGLIRRFAFSLVQCLRLLHREN-----IIHCDLKPENVLLKQRGSSSIKVIDFG-S 217
+ F L ++ + +L +C HR + ++H DLKP NV L G ++K+ DFG +
Sbjct: 110 EEFVLRVMTQLTLALKEC----HRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLA 163
Query: 218 SCYSHQRVYT--YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFP 269
+H + ++ + +Y SPE + + Y D+WSLGC+L EL C L P
Sbjct: 164 RILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL---CALMP 214
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRFY 234
+++ L LH E IH D+K NVLL + G +K+ DFG + + + T++ + F+
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VKLADFGVAGQLTDTQIKRNTFVGTPFW 170
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
+PEVI Y D+WSLG EL G P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEP 202
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 26 LEVIGKGSFGQVIRALDHKTN 46
LE IGKGSFG+V + +D++T
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQ 32
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKR 160
K +Q + E+++L + +S Y ++ FY + I E M+ +L +++K+
Sbjct: 63 KPAIRNQIIRELQVL-----HECNSPY-IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 116
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLL-HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SS 218
++ + + ++++ L L + I+H D+KP N+L+ RG IK+ DFG S
Sbjct: 117 AGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSG 172
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG-CPLFPGENEVEQL 277
+++ +R Y SPE + G Y D+WS+G L E+ G P+ G +
Sbjct: 173 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIF 232
Query: 278 ACIMEILGCPP 288
+ I+ PP
Sbjct: 233 ELLDYIVNEPP 243
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 128 YNVIHMLEYFYFRNHLCISFELMN----LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLR 183
+NV+ M + + L + E + ++ ++ N Q I +++Q L
Sbjct: 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQ------IATVCEAVLQALA 155
Query: 184 LLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV---YTYIQSRFYRSPEVI 240
LH + +IH D+K +++LL G +K+ DFG + V + + ++ +PEVI
Sbjct: 156 YLHAQGVIHRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI 213
Query: 241 LGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINT 294
Y +D+WSLG ++ E+ G P + ++ V+ + + + PP ++ N+
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPPPKLKNS 264
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRFY 234
+++ L LH E IH D+K NVLL + G +K+ DFG + + + T++ + F+
Sbjct: 133 ILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VKLADFGVAGQLTDTQIKRNTFVGTPFW 190
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
+PEVI Y D+WSLG EL G P
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEP 222
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 26 LEVIGKGSFGQVIRALDHKTN 46
LE IGKGSFG+V + +D++T
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQ 52
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 20/183 (10%)
Query: 97 NGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYF--RNHLCISFELMNLNL 154
NG N K+ E+++L LR K NVI +++ Y + + + E +
Sbjct: 48 NGEANVKK-------EIQLLRRLRHK------NVIQLVDVLYNEEKQKMYMVMEYCVCGM 94
Query: 155 YELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVID 214
E++ + F + + L+ L LH + I+H D+KP N+LL G+ I +
Sbjct: 95 QEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALG 154
Query: 215 FGSSCY---SHQRVYTYIQSRFYRSPEVILGLPY--GPPIDMWSLGCILAELYTGCPLFP 269
+ + + T S ++ PE+ GL G +D+WS G L + TG F
Sbjct: 155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
Query: 270 GEN 272
G+N
Sbjct: 215 GDN 217
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKR 160
K +Q + E+++L + +S Y ++ FY + I E M+ +L +++K+
Sbjct: 106 KPAIRNQIIRELQVL-----HECNSPY-IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 159
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLL-HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SS 218
++ + + ++++ L L + I+H D+KP N+L+ RG IK+ DFG S
Sbjct: 160 AGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSG 215
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+++ +R Y SPE + G Y D+WS+G L E+ G
Sbjct: 216 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 85 ESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDA---------------DSSYN 129
E +S+ G + G K + LI R L HL K A +S Y
Sbjct: 19 ERISELGAGN--GGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 75
Query: 130 VIHMLEYFYFRNHLCISFELMN-------LNLYELIKRNNYQGFSLGLIRRFAFSLVQCL 182
++ FY + I E M+ L + I S+ ++R A+
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAY------ 129
Query: 183 RLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQSRFYRSPEVIL 241
L + I+H D+KP N+L+ RG IK+ DFG S +++ +R Y +PE +
Sbjct: 130 -LREKHQIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQ 186
Query: 242 GLPYGPPIDMWSLGCILAELYTG 264
G Y D+WS+G L EL G
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVG 209
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFE--LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLH 186
VI +L++F + + E L +L++ I G G R F +V ++ H
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE--GPSRCFFGQVVAAIQHCH 156
Query: 187 RENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFYRSPEVILGLPY 245
++H D+K EN+L+ R + K+IDFGS H YT + +R Y PE I Y
Sbjct: 157 SRGVVHRDIKDENILIDLRRGCA-KLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQY 215
Query: 246 -GPPIDMWSLGCILAELYTG 264
P +WSLG +L ++ G
Sbjct: 216 HALPATVWSLGILLYDMVCG 235
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYI 229
RR ++ + HR ++H DLKPENVLL ++ K+ DFG S + +
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRDSC 171
Query: 230 QSRFYRSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGEN 272
S Y +PEVI G Y GP +D+WS G IL L G F E+
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 60 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 117
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 175
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKR 160
K +Q + E+++L + +S Y ++ FY + I E M+ +L +++K+
Sbjct: 71 KPAIRNQIIRELQVL-----HECNSPY-IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 124
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLL-HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SS 218
++ + + ++++ L L + I+H D+KP N+L+ RG IK+ DFG S
Sbjct: 125 AGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSG 180
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+++ +R Y SPE + G Y D+WS+G L E+ G
Sbjct: 181 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 87/204 (42%), Gaps = 39/204 (19%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGS-SSIKVIDF--GS--------SCYSHQRVY 226
+ L LH + I H DLKPEN+L + S +K+ DF GS S S +
Sbjct: 120 VASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179
Query: 227 TYIQSRFYRSPEVILGLP-----YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIM 281
T S Y +PEV+ Y D+WSLG IL L +G P F G +
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD------ 233
Query: 282 EILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFV 341
C D + + + F+S +G+ P KD A + C K D +
Sbjct: 234 ----CGWDRGEACPACQNMLFESI--------QEGKYEFP-DKDWAHI-SCAAK---DLI 276
Query: 342 TQCFNWDSKKRLTPDEALRHEWLK 365
++ D+K+RL+ + L+H W++
Sbjct: 277 SKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKR 160
K +Q + E+++L + +S Y ++ FY + I E M+ +L +++K+
Sbjct: 44 KPAIRNQIIRELQVL-----HECNSPY-IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 97
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLL-HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SS 218
++ + + ++++ L L + I+H D+KP N+L+ RG IK+ DFG S
Sbjct: 98 AGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSG 153
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+++ +R Y SPE + G Y D+WS+G L E+ G
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 111/272 (40%), Gaps = 59/272 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
+E L+++GKG+FG+VI + T +YY A KI
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATG----RYY------------------------AMKIL 41
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H L E R+L +S + + L+Y F +
Sbjct: 42 KKEVIVA------------KDEVAH-TLTENRVLQ-------NSRHPFLTALKYSFQTHD 81
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHCDLKPEN 199
LC E N L+ + R FS R + +V L LH E N+++ DLK EN
Sbjct: 82 RLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 139
Query: 200 VLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGC 256
++L + G IK+ DFG + + + Y +PEV+ YG +D W LG
Sbjct: 140 LMLDKDGH--IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 197
Query: 257 ILAELYTG-CPLFPGENEVEQLACIMEILGCP 287
++ E+ G P + ++E +ME + P
Sbjct: 198 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 229
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 111/272 (40%), Gaps = 59/272 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
+E L+++GKG+FG+VI + T +YY A KI
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATG----RYY------------------------AMKIL 42
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H L E R+L +S + + L+Y F +
Sbjct: 43 KKEVIVA------------KDEVAH-TLTENRVLQ-------NSRHPFLTALKYSFQTHD 82
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHCDLKPEN 199
LC E N L+ + R FS R + +V L LH E N+++ DLK EN
Sbjct: 83 RLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 140
Query: 200 VLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGC 256
++L + G IK+ DFG + + + Y +PEV+ YG +D W LG
Sbjct: 141 LMLDKDGH--IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 198
Query: 257 ILAELYTG-CPLFPGENEVEQLACIMEILGCP 287
++ E+ G P + ++E +ME + P
Sbjct: 199 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 230
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKR 160
K +Q + E+++L + +S Y ++ FY + I E M+ +L +++K+
Sbjct: 44 KPAIRNQIIRELQVL-----HECNSPY-IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 97
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLL-HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SS 218
++ + + ++++ L L + I+H D+KP N+L+ RG IK+ DFG S
Sbjct: 98 AGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSG 153
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+++ +R Y SPE + G Y D+WS+G L E+ G
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 111/272 (40%), Gaps = 59/272 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
+E L+++GKG+FG+VI + T +YY A KI
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATG----RYY------------------------AMKIL 43
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H L E R+L +S + + L+Y F +
Sbjct: 44 KKEVIVA------------KDEVAH-TLTENRVLQ-------NSRHPFLTALKYSFQTHD 83
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHCDLKPEN 199
LC E N L+ + R FS R + +V L LH E N+++ DLK EN
Sbjct: 84 RLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN 141
Query: 200 VLLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGC 256
++L + G IK+ DFG + + + Y +PEV+ YG +D W LG
Sbjct: 142 LMLDKDGH--IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 199
Query: 257 ILAELYTG-CPLFPGENEVEQLACIMEILGCP 287
++ E+ G P + ++E +ME + P
Sbjct: 200 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 231
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKR 160
K +Q + E+++L + +S Y ++ FY + I E M+ +L +++K+
Sbjct: 44 KPAIRNQIIRELQVL-----HECNSPY-IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 97
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLL-HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SS 218
++ + + ++++ L L + I+H D+KP N+L+ RG IK+ DFG S
Sbjct: 98 AGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSG 153
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+++ +R Y SPE + G Y D+WS+G L E+ G
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS----CYSHQRVY 226
++ + +V L LH+ II+ D+K EN+LL G + + DFG S +R Y
Sbjct: 161 VQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKEFVADETERAY 218
Query: 227 TYIQSRFYRSPEVILGLPYG--PPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
+ + Y +P+++ G G +D WSLG ++ EL TG F + E A I
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 274
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 107/257 (41%), Gaps = 52/257 (20%)
Query: 23 YEILEVIGKGSFGQVIRA---LDHKTNTHALKYYGNQLTEFERTEIEK--------YLEI 71
++ +E+IG G FGQV +A +D KT Y N+ E E + K Y
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 72 WYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQAL-IEVRILDHLRKKDADSSYNV 130
W G D ++SL ++ +D EN S N R + L I++ D
Sbjct: 74 WD-GFDYDPETSDDSL-ESSDYDPEN-SKNSSRSKTKCLFIQMEFCDK------------ 118
Query: 131 IHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENI 190
LE + + +++ L L+E I + + +H + +
Sbjct: 119 -GTLEQWIEKRRGEKLDKVLALELFEQITKG--------------------VDYIHSKKL 157
Query: 191 IHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPP 248
IH DLKP N+ L + +K+ DFG +S + + + Y SPE I YG
Sbjct: 158 IHRDLKPSNIFLVD--TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKE 215
Query: 249 IDMWSLGCILAELYTGC 265
+D+++LG ILAEL C
Sbjct: 216 VDLYALGLILAELLHVC 232
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKR 160
K +Q + E+++L + +S Y ++ FY + I E M+ +L +++K+
Sbjct: 47 KPAIRNQIIRELQVL-----HECNSPY-IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 100
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLL-HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SS 218
++ + + ++++ L L + I+H D+KP N+L+ RG IK+ DFG S
Sbjct: 101 AGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSG 156
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+ ++ +R Y SPE + G Y D+WS+G L E+ G
Sbjct: 157 QLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 147 FELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ-R 205
F L L E++ N+ + R +++ + LH+ NI+H DLKP+N+LL
Sbjct: 117 FSLCLPELAEMVSEND--------VIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY 168
Query: 206 GSSSIKVIDFG-SSCYSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
IK++DFG S H + + + Y +PE++ P DMW++G I L T
Sbjct: 169 PLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
Query: 264 GCPLFPGENEVEQLACIMEILGCPPDEVINTASR 297
F GE+ E I ++ +E ++ S+
Sbjct: 229 HTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQ 262
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 91/207 (43%), Gaps = 55/207 (26%)
Query: 170 LIRRFAFSLVQCLRLLHREN--IIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYT 227
++ + + V+ L L +EN IIH D+KP N+LL + G +IK+ DFG S Q V +
Sbjct: 126 ILGKITLATVKALNHL-KENLKIIHRDIKPSNILLDRSG--NIKLCDFG---ISGQLVDS 179
Query: 228 YIQS-----RFYRSPEVILGLP----YGPPIDMWSLGCILAELYTGCPLFPGENEV-EQL 277
++ R Y +PE I Y D+WSLG L EL TG +P N V +QL
Sbjct: 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL 239
Query: 278 ACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAF 337
++ KG P ++NS+ R+ P +F
Sbjct: 240 TQVV-----------------------KGDPPQLSNSEEREFSP--------------SF 262
Query: 338 VDFVTQCFNWDSKKRLTPDEALRHEWL 364
++FV C D KR E L+H ++
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKR 160
K +Q + E+++L + +S Y ++ FY + I E M+ +L +++K+
Sbjct: 44 KPAIRNQIIRELQVL-----HECNSPY-IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 97
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLL-HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SS 218
++ + + ++++ L L + I+H D+KP N+L+ RG IK+ DFG S
Sbjct: 98 AGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSG 153
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+++ +R Y SPE + G Y D+WS+G L E+ G
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKR 160
K +Q + E+++L + +S Y ++ FY + I E M+ +L +++K+
Sbjct: 44 KPAIRNQIIRELQVL-----HECNSPY-IVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 97
Query: 161 NNYQGFSLGLIRRFAFSLVQCLRLL-HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SS 218
++ + + ++++ L L + I+H D+KP N+L+ RG IK+ DFG S
Sbjct: 98 AGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSG 153
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+++ +R Y SPE + G Y D+WS+G L E+ G
Sbjct: 154 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRFY 234
+++ L LH E IH D+K NVLL + G +K+ DFG + + + ++ + F+
Sbjct: 128 ILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
+PEVI Y D+WSLG EL G P
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEP 217
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 26 LEVIGKGSFGQVIRALDHKTN 46
LE IGKGSFG+V + +D++T
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQ 47
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 137
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 195
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRFY 234
+++ L LH E IH D+K NVLL + G +K+ DFG + + + ++ + F+
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VKLADFGVAGQLTDTQIKRNXFVGTPFW 170
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
+PEVI Y D+WSLG EL G P
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGEP 202
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 26 LEVIGKGSFGQVIRALDHKTN 46
LE IGKGSFG+V + +D++T
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQ 32
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 137
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 195
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
++ +LIK I +++ L LH+ +IH D+K +NVLL + ++ +K+
Sbjct: 113 SVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKL 170
Query: 213 IDFGSSCYSHQRV---YTYIQSRFYRSPEVIL-----GLPYGPPIDMWSLGCILAELYTG 264
+DFG S + V T+I + ++ +PEVI Y D+WSLG E+ G
Sbjct: 171 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
Query: 265 CP 266
P
Sbjct: 231 AP 232
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 79 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 136
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 194
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 79 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 136
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 194
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 235
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 64 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 121
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 179
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 120
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 178
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 179 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 122
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 180
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 80 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 137
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 195
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 236
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 122
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 180
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 42/254 (16%)
Query: 129 NVIHMLEYFYFRNHLCISFE-LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N++ ++E+F + FE L ++ I++ + F+ R + L LH
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFLHT 129
Query: 188 ENIIHCDLKPENVLLKQ-RGSSSIKVIDF--------GSSC--YSHQRVYTYIQSRFYRS 236
+ I H DLKPEN+L + S +K+ DF +SC + + T S Y +
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 237 PEVI-----LGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEV 291
PEV+ Y D+WSLG +L + +G P F G + G EV
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD--------CGWDRGEV 241
Query: 292 INTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKK 351
+ F+S +G+ P KD A + D +++ D+K+
Sbjct: 242 CRVCQNK--LFESI--------QEGKYEFP-DKDWAHI----SSEAKDLISKLLVRDAKQ 286
Query: 352 RLTPDEALRHEWLK 365
RL+ + L+H W++
Sbjct: 287 RLSAAQVLQHPWVQ 300
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 149
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 207
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 149
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 207
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 65 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 122
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 180
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 58/271 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
++ L+++GKG+FG+VI + T +YY A KI
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATG----RYY------------------------AMKIL 41
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H + E R+L + R + + L+Y F +
Sbjct: 42 RKEVI------------IAKDEVAH-TVTESRVLQNTR-------HPFLTALKYAFQTHD 81
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
LC E N L+ + R F+ R + +V L LH ++++ D+K EN+
Sbjct: 82 RLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 139
Query: 201 LLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
+L + G IK+ DFG + T+ + Y +PEV+ YG +D W LG +
Sbjct: 140 MLDKDGH--IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 197
Query: 258 LAELYTG-CPLFPGENEVEQLACIMEILGCP 287
+ E+ G P + ++E +ME + P
Sbjct: 198 MYEMMCGRLPFYNQDHERLFELILMEEIRFP 228
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 150
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 208
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 149
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 207
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 58/271 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
++ L+++GKG+FG+VI + T +YY A KI
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATG----RYY------------------------AMKIL 38
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H + E R+L + R + + L+Y F +
Sbjct: 39 RKEVI------------IAKDEVAH-TVTESRVLQNTR-------HPFLTALKYAFQTHD 78
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
LC E N L+ + R F+ R + +V L LH ++++ D+K EN+
Sbjct: 79 RLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 201 LLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
+L + G IK+ DFG + T+ + Y +PEV+ YG +D W LG +
Sbjct: 137 MLDKDGH--IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 258 LAELYTG-CPLFPGENEVEQLACIMEILGCP 287
+ E+ G P + ++E +ME + P
Sbjct: 195 MYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 150
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 208
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 164
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 222
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 60 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 117
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 175
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 58/271 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
++ L+++GKG+FG+VI + T +YY A KI
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATG----RYY------------------------AMKIL 38
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H + E R+L + R + + L+Y F +
Sbjct: 39 RKEVI------------IAKDEVAH-TVTESRVLQNTR-------HPFLTALKYAFQTHD 78
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
LC E N L+ + R F+ R + +V L LH ++++ D+K EN+
Sbjct: 79 RLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 201 LLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
+L + G IK+ DFG + T+ + Y +PEV+ YG +D W LG +
Sbjct: 137 MLDKDGH--IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 258 LAELYTG-CPLFPGENEVEQLACIMEILGCP 287
+ E+ G P + ++E +ME + P
Sbjct: 195 MYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 99 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 156
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 214
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 255
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 60 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 117
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 175
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 150
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 208
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQCLRLLHR 187
N++ E HL I E + EL +R N FS R F L+ + H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS--HQRVYTYIQSRFYRSPEVILGLPY 245
+ H DLK EN LL + +K+ DFG S S H + + + + Y +PEV+L Y
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 246 -GPPIDMWSLGCILAELYTGCPLFPGENEVE 275
G D+WS G L + G +P E+ E
Sbjct: 194 DGKVADVWSCGVTLYVMLVGA--YPFEDPEE 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ R + +V + +H+ + +H D+KP+NVLL G I++ DFGS C T +
Sbjct: 192 MARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGH--IRLADFGS-CLKMNDDGT-V 247
Query: 230 QSRF------YRSPEVILGLP-----YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLA 278
QS Y SPE++ + YGP D WSLG + E+ G F E+ VE
Sbjct: 248 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 307
Query: 279 CIM 281
IM
Sbjct: 308 KIM 310
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 93 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 150
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 208
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 92 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 149
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 207
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 164
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 222
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 87 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 144
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 202
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 243
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 164
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 222
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 119 LRKKDADSSYNVIHMLEYFYFRNHLCISFELMN--LNLYELIKRNNYQGFSLGLIRRFAF 176
L KK + VI +L++F + + E +L++ I L R F +
Sbjct: 112 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 169
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFGSSCYSHQRVYT-YIQSRFY 234
+++ +R H ++H D+K EN+L+ RG +K+IDFGS VYT + +R Y
Sbjct: 170 QVLEAVRHCHNCGVLHRDIKDENILIDLNRG--ELKLIDFGSGALLKDTVYTDFDGTRVY 227
Query: 235 RSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEV 274
PE I Y G +WSLG +L ++ G F + E+
Sbjct: 228 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 268
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ- 230
RR ++ + HR ++H DLKPENVLL ++ K+ DFG S +
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNA--KIADFGLSNMMSDGEFLRXSC 176
Query: 231 -SRFYRSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLF 268
S Y +PEVI G Y GP +D+WS G IL L G F
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
F ++ F LV L L + IIH D+KP+N+LL + G I + + ++
Sbjct: 112 FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI 171
Query: 226 YTYIQSRFYRSPEVI---LGLPYGPPIDMWSLGCILAELYTG 264
T ++ Y +PE+ G Y +D WSLG EL G
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ R + +V + +H+ + +H D+KP+NVLL G I++ DFGS C T +
Sbjct: 176 MARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGH--IRLADFGS-CLKMNDDGT-V 231
Query: 230 QSRF------YRSPEVILGLP-----YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLA 278
QS Y SPE++ + YGP D WSLG + E+ G F E+ VE
Sbjct: 232 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 291
Query: 279 CIM 281
IM
Sbjct: 292 KIM 294
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 47/240 (19%)
Query: 132 HMLEYF--YFRN-HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
H+++Y+ YF+N L I E I R + + I S ++ L LH
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVILGLPY 245
IH D+K N+LL G + K+ DFG + + I + F+ +PEVI + Y
Sbjct: 145 RKIHRDIKAGNILLNTEGHA--KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 246 GPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSK 305
D+WSLG E+ G P + ++ + I I PP T + L+ D+
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPY---ADIHPMRAIFMIPTNPPP----TFRKPELWSDN- 254
Query: 306 GTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWLK 365
F DFV QC ++R T + L+H +++
Sbjct: 255 -------------------------------FTDFVKQCLVKSPEQRATATQLLQHPFVR 283
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 45/243 (18%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + + ++ + ELM L + I R + FS F++ + + LH
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHA 134
Query: 188 ENIIHCDLKPENVL-LKQRGS-SSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVILG 242
+ ++H DLKP N+L + + G+ SI++ DFG + + + T + + +PEV+
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER 194
Query: 243 LPYGPPIDMWSLGCILAELYTG-CPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLF 301
Y D+WSLG +L + TG P G ++ P+E++ + F
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-------------PEEILARIGSGK-F 240
Query: 302 FDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRH 361
S G ++++ D V++ + D +RLT LRH
Sbjct: 241 SLSGGYWNSVSDTAK----------------------DLVSKMLHVDPHQRLTAALVLRH 278
Query: 362 EWL 364
W+
Sbjct: 279 PWI 281
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R F +Q ++ LH +IH DLK N+ L +K+
Sbjct: 128 SLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKI 183
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + + +R T + Y +PEV+ + +D+WSLGCIL L G P F
Sbjct: 184 GDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 49/249 (19%)
Query: 23 YEILEVIGKGSFGQVIRA---LDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDAC 79
++ +E+IG G FGQV +A +D KT Y N+ E E + K + + + C
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 80 KIHGEESLSQNGGFDDENGSYNKKRFHHQAL-IEVRILDHLRKKDADSSYNVIHMLEYFY 138
+D E S N R + L I++ D LE +
Sbjct: 73 --------WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDK-------------GTLEQWI 111
Query: 139 FRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPE 198
+ +++ L L+E I + + +H + +I+ DLKP
Sbjct: 112 EKRRGEKLDKVLALELFEQITKG--------------------VDYIHSKKLINRDLKPS 151
Query: 199 NVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGC 256
N+ L + +K+ DFG +S + + + Y SPE I YG +D+++LG
Sbjct: 152 NIFLVD--TKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGL 209
Query: 257 ILAELYTGC 265
ILAEL C
Sbjct: 210 ILAELLHVC 218
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 16/186 (8%)
Query: 102 KKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLN-LYELIKR 160
K+ HQ E+ I HL N++ + YFY R + + E LY+ +++
Sbjct: 63 KEGVEHQLRREIEIQAHLHHP------NILRLYNYFYDRRRIYLILEYAPRGELYKELQK 116
Query: 161 NNY--QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS 218
+ + + ++ A +L+ C H + +IH D+KPEN+LL +G I DFG S
Sbjct: 117 SCTFDEQRTATIMEELADALMYC----HGKKVIHRDIKPENLLLGLKGELKIA--DFGWS 170
Query: 219 CYSHQ-RVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
++ R T + Y PE+I G + +D+W +G + EL G P F + E
Sbjct: 171 VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETY 230
Query: 278 ACIMEI 283
I+++
Sbjct: 231 RRIVKV 236
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHR 187
N++ E HL I E + EL +R G FS R F L+ + H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS--HQRVYTYIQSRFYRSPEVILGLPY 245
+ H DLK EN LL + +K+ DFG S S H + + + + Y +PEV+L Y
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 246 -GPPIDMWSLGCILAELYTGCPLFPGENEVE 275
G D+WS G L + G +P E+ E
Sbjct: 194 DGKVADVWSCGVTLYVMLVGA--YPFEDPEE 222
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ R + +V + +H+ + +H D+KP+N+L+ G I++ DFGS C T +
Sbjct: 176 MARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH--IRLADFGS-CLKLMEDGT-V 231
Query: 230 QSRF------YRSPEVILGLP-----YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLA 278
QS Y SPE++ + YGP D WSLG + E+ G F E+ VE
Sbjct: 232 QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 291
Query: 279 CIM 281
IM
Sbjct: 292 KIM 294
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N++ E HL I E + LYE I N FS R F L+ + H
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERI--CNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS--HQRVYTYIQSRFYRSPEVILGLPY 245
I H DLK EN LL + +K+ DFG S S H + + + + Y +PEV+L Y
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 246 -GPPIDMWSLGCILAELYTGCPLFPGENEVE 275
G D+WS G L + G +P E+ E
Sbjct: 195 DGKIADVWSCGVTLYVMLVGA--YPFEDPEE 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 8/151 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHR 187
N++ E HL I E + EL +R G FS R F L+ + H
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS--HQRVYTYIQSRFYRSPEVILGLPY 245
+ H DLK EN LL + +K+ DFG S S H + + + + Y +PEV+L Y
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 246 -GPPIDMWSLGCILAELYTGCPLFPGENEVE 275
G D+WS G L + G +P E+ E
Sbjct: 193 DGKVADVWSCGVTLYVMLVGA--YPFEDPEE 221
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQR----VYT 227
R ++ + L LH II+ DLK +NVLL G IK+ D+G C R T
Sbjct: 156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGM-CKEGLRPGDTTST 212
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+ + Y +PE++ G YG +D W+LG ++ E+ G
Sbjct: 213 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 58/271 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
++ L+++GKG+FG+VI + T +YY A KI
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATG----RYY------------------------AMKIL 43
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H + E R+L + R + + L+Y F +
Sbjct: 44 RKEVI------------IAKDEVAH-TVTESRVLQNTR-------HPFLTALKYAFQTHD 83
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
LC E N L+ + R F+ R + +V L LH ++++ D+K EN+
Sbjct: 84 RLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 141
Query: 201 LLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
+L + G IK+ DFG + + + Y +PEV+ YG +D W LG +
Sbjct: 142 MLDKDGH--IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 258 LAELYTG-CPLFPGENEVEQLACIMEILGCP 287
+ E+ G P + ++E +ME + P
Sbjct: 200 MYEMMCGRLPFYNQDHERLFELILMEEIRFP 230
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 58/271 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
++ L+++GKG+FG+VI + T +YY A KI
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATG----RYY------------------------AMKIL 38
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H + E R+L + R + + L+Y F +
Sbjct: 39 RKEVI------------IAKDEVAH-TVTESRVLQNTR-------HPFLTALKYAFQTHD 78
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
LC E N L+ + R F+ R + +V L LH ++++ D+K EN+
Sbjct: 79 RLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 201 LLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
+L + G IK+ DFG + + + Y +PEV+ YG +D W LG +
Sbjct: 137 MLDKDGH--IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 258 LAELYTG-CPLFPGENEVEQLACIMEILGCP 287
+ E+ G P + ++E +ME + P
Sbjct: 195 MYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ----RVYT 227
R + +V L +H IH D+KP+N+LL + G +K+ DFG+ ++ R T
Sbjct: 171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMVRCDT 228
Query: 228 YIQSRFYRSPEVILGLP----YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIM-- 281
+ + Y SPEV+ YG D WS+G L E+ G F ++ V + IM
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 288
Query: 282 -EILGCPPDEVINTASR 297
L P D I+ ++
Sbjct: 289 KNSLTFPDDNDISKEAK 305
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFE 61
YE+++VIG+G+FG+V + + HK+ Y L++FE
Sbjct: 71 YEVVKVIGRGAFGEV-QLVRHKSTRKV--YAMKLLSKFE 106
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 58/271 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
++ L+++GKG+FG+VI + T +YY A KI
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATG----RYY------------------------AMKIL 38
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H + E R+L + R + + L+Y F +
Sbjct: 39 RKEVI------------IAKDEVAH-TVTESRVLQNTR-------HPFLTALKYAFQTHD 78
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
LC E N L+ + R F+ R + +V L LH ++++ D+K EN+
Sbjct: 79 RLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 201 LLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
+L + G IK+ DFG + + + Y +PEV+ YG +D W LG +
Sbjct: 137 MLDKDGH--IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 258 LAELYTG-CPLFPGENEVEQLACIMEILGCP 287
+ E+ G P + ++E +ME + P
Sbjct: 195 MYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ----RVYT 227
R + +V L +H IH D+KP+N+LL + G +K+ DFG+ ++ R T
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMVRCDT 233
Query: 228 YIQSRFYRSPEVILGLP----YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIM-- 281
+ + Y SPEV+ YG D WS+G L E+ G F ++ V + IM
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
Query: 282 -EILGCPPDEVINTASR 297
L P D I+ ++
Sbjct: 294 KNSLTFPDDNDISKEAK 310
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFE 61
YE+++VIG+G+FG+V + + HK+ Y L++FE
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKV--YAMKLLSKFE 111
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPE 238
+Q L LH N+IH D+K N+LL + G +K+ DFGS+ ++ + ++ +PE
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKLGDFGSASIM-APANXFVGTPYWMAPE 181
Query: 239 VILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
VIL + Y +D+WSLG EL P N + L I +
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ----RVYT 227
R + +V L +H IH D+KP+N+LL + G +K+ DFG+ ++ R T
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKLADFGTCMKMNKEGMVRCDT 233
Query: 228 YIQSRFYRSPEVILGLP----YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIM-- 281
+ + Y SPEV+ YG D WS+G L E+ G F ++ V + IM
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
Query: 282 -EILGCPPDEVINTASR 297
L P D I+ ++
Sbjct: 294 KNSLTFPDDNDISKEAK 310
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFE 61
YE+++VIG+G+FG+V + + HK+ Y L++FE
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKV--YAMKLLSKFE 111
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 94/237 (39%), Gaps = 50/237 (21%)
Query: 137 FYFRNHLCISFELMNLNLYELIKR--NNYQGFSLGLIRRFAFSLVQCLRLLHRE-NIIHC 193
+ + I EL + +L + K+ + Q ++ + A S+V+ L LH + ++IH
Sbjct: 102 LFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 161
Query: 194 DLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQS--RFYRSPEVI----LGLPYGP 247
D+KP NVL+ G +K DFG S Y V I + + Y +PE I Y
Sbjct: 162 DVKPSNVLINALG--QVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSV 219
Query: 248 PIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGT 307
D+WSLG EL IL R +DS GT
Sbjct: 220 KSDIWSLGITXIEL--------------------AIL--------------RFPYDSWGT 245
Query: 308 PRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
P K +P + A FVDF +QC +SK+R T E +H +
Sbjct: 246 P--FQQLKQVVEEPSPQLPADKFSAE---FVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 156 ELIKRNNYQG---FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L KR N Q F I + + L+ +H I+H D+K +N+ L + G+ +++
Sbjct: 109 DLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT--VQL 166
Query: 213 IDFGSSCYSHQRV---YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
DFG + + V I + +Y SPE+ PY D+W+LGC+L EL T
Sbjct: 167 GDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPE 238
+Q L LH N+IH D+K N+LL + G +K+ DFGS+ ++ + ++ +PE
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKLGDFGSASIM-APANXFVGTPYWMAPE 220
Query: 239 VILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
VIL + Y +D+WSLG EL P N + L I +
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 267
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 110/271 (40%), Gaps = 58/271 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
++ L+++GKG+FG+VI + T +YY A KI
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATG----RYY------------------------AMKIL 38
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEY-FYFRN 141
+E + K H + E R+L + R + + L+Y F +
Sbjct: 39 RKEVI------------IAKDEVAH-TVTESRVLQNTR-------HPFLTALKYAFQTHD 78
Query: 142 HLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENV 200
LC E N L+ + R F+ R + +V L LH ++++ D+K EN+
Sbjct: 79 RLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 201 LLKQRGSSSIKVIDFG---SSCYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCI 257
+L + G IK+ DFG + + + Y +PEV+ YG +D W LG +
Sbjct: 137 MLDKDGH--IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 258 LAELYTG-CPLFPGENEVEQLACIMEILGCP 287
+ E+ G P + ++E +ME + P
Sbjct: 195 MYEMMCGRLPFYNQDHERLFELILMEEIRFP 225
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 34/153 (22%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ-- 223
S +R + +L + L+ +H+ I+H D+KP N L +R ++DFG + +H
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRR-LKKYALVDFGLAQGTHDTK 172
Query: 224 -RVYTYIQSRF----------------------------YRSPEVILGLP-YGPPIDMWS 253
+ ++QS +R+PEV+ P IDMWS
Sbjct: 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWS 232
Query: 254 LGCILAELYTG-CPLFPGENEVEQLACIMEILG 285
G I L +G P + +++ LA IM I G
Sbjct: 233 AGVIFLSLLSGRYPFYKASDDLTALAQIMTIRG 265
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R + +V + LHR +IH DLK N+ L + +K+
Sbjct: 103 SLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKI 158
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + Y +R T + Y +PEV+ + +D+WS+GCI+ L G P F
Sbjct: 159 GDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R F +Q ++ LH +IH DLK N+ L +K+
Sbjct: 128 SLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKI 183
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + + +R + Y +PEV+ + +D+WSLGCIL L G P F
Sbjct: 184 GDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R F +Q ++ LH +IH DLK N+ L +K+
Sbjct: 112 SLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKI 167
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + + +R + Y +PEV+ + +D+WSLGCIL L G P F
Sbjct: 168 GDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R + +V + LHR +IH DLK N+ L + +K+
Sbjct: 107 SLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKI 162
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + Y +R T + Y +PEV+ + +D+WS+GCI+ L G P F
Sbjct: 163 GDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R F +Q ++ LH +IH DLK N+ L +K+
Sbjct: 128 SLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND--DMDVKI 183
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + + +R + Y +PEV+ + +D+WSLGCIL L G P F
Sbjct: 184 GDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R + +V + LHR +IH DLK N+ L + +K+
Sbjct: 103 SLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKI 158
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + Y +R T + Y +PEV+ + +D+WS+GCI+ L G P F
Sbjct: 159 GDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 131/362 (36%), Gaps = 113/362 (31%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYL-EIWYLGLDACKI 81
Y IL+ IG G +V + L+ K +A+KY L E + ++ Y EI YL
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--LEEADNQTLDSYRNEIAYL------- 108
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NK + H S +I + +Y
Sbjct: 109 -------------------NKLQQH--------------------SDKIIRLYDYEITDQ 129
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF--SLVQCLRLLHRENIIHCDLKPEN 199
++ + E N++L +K+ S+ R ++ ++++ + +H+ I+H DLKP N
Sbjct: 130 YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 185
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-----SRFYRSPEVILGLPYG-------- 246
L+ +K+IDFG + + ++ + Y PE I +
Sbjct: 186 FLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 242
Query: 247 ---PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFD 303
P D+WSLGCIL + G P ++IN S+ D
Sbjct: 243 KISPKSDVWSLGCILYYMTYG--------------------KTPFQQIINQISKLHAIID 282
Query: 304 SKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
N + KD+ VL+C C D K+R++ E L H +
Sbjct: 283 P--------NHEIEFPDIPEKDLQDVLKC-----------CLKRDPKQRISIPELLAHPY 323
Query: 364 LK 365
++
Sbjct: 324 VQ 325
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-------SS 218
S+ F ++ ++ H I+H D+KP+N+L+ + ++K+ DFG +S
Sbjct: 108 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID--SNKTLKIFDFGIAKALSETS 165
Query: 219 CYSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEV 274
V +Q Y SPE G D++S+G +L E+ G P F GE V
Sbjct: 166 LTQTNHVLGTVQ---YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 131/362 (36%), Gaps = 113/362 (31%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYL-EIWYLGLDACKI 81
Y IL+ IG G +V + L+ K +A+KY L E + ++ Y EI YL
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--LEEADNQTLDSYRNEIAYL------- 64
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NK + H S +I + +Y
Sbjct: 65 -------------------NKLQQH--------------------SDKIIRLYDYEITDQ 85
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF--SLVQCLRLLHRENIIHCDLKPEN 199
++ + E N++L +K+ S+ R ++ ++++ + +H+ I+H DLKP N
Sbjct: 86 YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 141
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-----SRFYRSPEVILGLPYG-------- 246
L+ +K+IDFG + + ++ + Y PE I +
Sbjct: 142 FLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 198
Query: 247 ---PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFD 303
P D+WSLGCIL + G P ++IN S+ D
Sbjct: 199 KISPKSDVWSLGCILYYMTYG--------------------KTPFQQIINQISKLHAIID 238
Query: 304 SKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
N + KD+ VL+C C D K+R++ E L H +
Sbjct: 239 P--------NHEIEFPDIPEKDLQDVLKC-----------CLKRDPKQRISIPELLAHPY 279
Query: 364 LK 365
++
Sbjct: 280 VQ 281
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 57/266 (21%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+Y + + IGKGS+G V A + NT YY A K+
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNT----YY------------------------AMKV 45
Query: 82 HGEESLSQNGGFDDE----------NGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVI 131
++ L + GF G + Q E+ IL L NV+
Sbjct: 46 LSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP------NVV 99
Query: 132 HMLEYFYFRN--HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHREN 189
++E N HL + FEL+N +++ + S R + L++ + LH +
Sbjct: 100 KLVEVLDDPNEDHLYMVFELVNQG--PVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQK 157
Query: 190 IIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVIL---GL 243
IIH D+KP N+L+ + G IK+ DFG S S + + + + +PE + +
Sbjct: 158 IIHRDIKPSNLLVGEDG--HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKI 215
Query: 244 PYGPPIDMWSLGCIL-AELYTGCPLF 268
G +D+W++G L ++ CP
Sbjct: 216 FSGKALDVWAMGVTLYCFVFGQCPFM 241
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 131/362 (36%), Gaps = 113/362 (31%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYL-EIWYLGLDACKI 81
Y IL+ IG G +V + L+ K +A+KY L E + ++ Y EI YL
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--LEEADNQTLDSYRNEIAYL------- 80
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NK + H S +I + +Y
Sbjct: 81 -------------------NKLQQH--------------------SDKIIRLYDYEITDQ 101
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF--SLVQCLRLLHRENIIHCDLKPEN 199
++ + E N++L +K+ S+ R ++ ++++ + +H+ I+H DLKP N
Sbjct: 102 YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 157
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-----SRFYRSPEVILGLPYG-------- 246
L+ +K+IDFG + + ++ + Y PE I +
Sbjct: 158 FLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 214
Query: 247 ---PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFD 303
P D+WSLGCIL + G P ++IN S+ D
Sbjct: 215 KISPKSDVWSLGCILYYMTYG--------------------KTPFQQIINQISKLHAIID 254
Query: 304 SKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
N + KD+ VL+C C D K+R++ E L H +
Sbjct: 255 P--------NHEIEFPDIPEKDLQDVLKC-----------CLKRDPKQRISIPELLAHPY 295
Query: 364 LK 365
++
Sbjct: 296 VQ 297
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSLG--LIRRFAFSLVQCLRLL 185
NVI F N L I EL + +L +IK Q + + ++ L L +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 186 HRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQR---VYTYIQSRFYRSPEVILG 242
H ++H D+KP NV + G +K+ D G + + ++ + + +Y SPE I
Sbjct: 153 HSRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 210
Query: 243 LPYGPPIDMWSLGCILAEL 261
Y D+WSLGC+L E+
Sbjct: 211 NGYNFKSDIWSLGCLLYEM 229
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 131/362 (36%), Gaps = 113/362 (31%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYL-EIWYLGLDACKI 81
Y IL+ IG G +V + L+ K +A+KY L E + ++ Y EI YL
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--LEEADNQTLDSYRNEIAYL------- 108
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NK + H S +I + +Y
Sbjct: 109 -------------------NKLQQH--------------------SDKIIRLYDYEITDQ 129
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF--SLVQCLRLLHRENIIHCDLKPEN 199
++ + E N++L +K+ S+ R ++ ++++ + +H+ I+H DLKP N
Sbjct: 130 YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 185
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-----SRFYRSPEVILGLPYG-------- 246
L+ +K+IDFG + + ++ + Y PE I +
Sbjct: 186 FLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 242
Query: 247 ---PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFD 303
P D+WSLGCIL + G P ++IN S+ D
Sbjct: 243 KISPKSDVWSLGCILYYMTYG--------------------KTPFQQIINQISKLHAIID 282
Query: 304 SKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
N + KD+ VL+C C D K+R++ E L H +
Sbjct: 283 --------PNHEIEFPDIPEKDLQDVLKC-----------CLKRDPKQRISIPELLAHPY 323
Query: 364 LK 365
++
Sbjct: 324 VQ 325
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 131/362 (36%), Gaps = 113/362 (31%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYL-EIWYLGLDACKI 81
Y IL+ IG G +V + L+ K +A+KY L E + ++ Y EI YL
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--LEEADNQTLDSYRNEIAYL------- 60
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NK + H S +I + +Y
Sbjct: 61 -------------------NKLQQH--------------------SDKIIRLYDYEITDQ 81
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF--SLVQCLRLLHRENIIHCDLKPEN 199
++ + E N++L +K+ S+ R ++ ++++ + +H+ I+H DLKP N
Sbjct: 82 YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 137
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-----SRFYRSPEVILGLPYG-------- 246
L+ +K+IDFG + + ++ + Y PE I +
Sbjct: 138 FLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 194
Query: 247 ---PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFD 303
P D+WSLGCIL + G P ++IN S+ D
Sbjct: 195 KISPKSDVWSLGCILYYMTYG--------------------KTPFQQIINQISKLHAIID 234
Query: 304 SKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
N + KD+ VL+C C D K+R++ E L H +
Sbjct: 235 P--------NHEIEFPDIPEKDLQDVLKC-----------CLKRDPKQRISIPELLAHPY 275
Query: 364 LK 365
++
Sbjct: 276 VQ 277
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 130/362 (35%), Gaps = 113/362 (31%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYL-EIWYLGLDACKI 81
Y IL+ IG G +V + L+ K +A+KY L E + ++ Y EI YL
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--LEEADNQTLDSYRNEIAYL------- 108
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NK + H S +I + +Y
Sbjct: 109 -------------------NKLQQH--------------------SDKIIRLYDYEITDQ 129
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF--SLVQCLRLLHRENIIHCDLKPEN 199
++ + E N++L +K+ S+ R ++ ++++ + +H+ I+H DLKP N
Sbjct: 130 YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 185
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR-----FYRSPEVILGLPYG-------- 246
L+ +K+IDFG + + ++ Y PE I +
Sbjct: 186 FLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKS 242
Query: 247 ---PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFD 303
P D+WSLGCIL + G P ++IN S+ D
Sbjct: 243 KISPKSDVWSLGCILYYMTYG--------------------KTPFQQIINQISKLHAIID 282
Query: 304 SKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
N + KD+ VL+C C D K+R++ E L H +
Sbjct: 283 --------PNHEIEFPDIPEKDLQDVLKC-----------CLKRDPKQRISIPELLAHPY 323
Query: 364 LK 365
++
Sbjct: 324 VQ 325
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 42/195 (21%)
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGS-SSIKVIDFGSSCY---SHQRVYTYIQ 230
F++ + + LH + ++H DLKP N+L + + G+ SI++ DFG + + + T
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY 182
Query: 231 SRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG-CPLFPGENEVEQLACIMEILGCPPD 289
+ + +PEV+ Y D+WSLG +L TG P G ++ P+
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDT-------------PE 229
Query: 290 EVINTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDS 349
E++ + F S G ++++ D V++ + D
Sbjct: 230 EILARIGSGK-FSLSGGYWNSVSDTAK----------------------DLVSKXLHVDP 266
Query: 350 KKRLTPDEALRHEWL 364
+RLT LRH W+
Sbjct: 267 HQRLTAALVLRHPWI 281
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQR----VYT 227
R ++ + L LH II+ DLK +NVLL G IK+ D+G C R
Sbjct: 124 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGM-CKEGLRPGDTTSX 180
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+ + Y +PE++ G YG +D W+LG ++ E+ G
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 144/354 (40%), Gaps = 72/354 (20%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNT-HALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
Y I+ + +G F ++I L K N +ALK Y L E +R D K
Sbjct: 33 YRIIRTLNQGKFNKII--LCEKDNKFYALKKYEKSLLEKKR--------------DFTKS 76
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
+ ++ +S +DD Q + +++ L + ++Y+ ++++ Y Y N
Sbjct: 77 NNDK-ISIKSKYDDFKNEL-------QIITDIKNEYCLTCEGIITNYDEVYII-YEYMEN 127
Query: 142 HLCISFELMNLNLYELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHRE-NIIHCDLKPEN 199
+ F+ Y + NY F + +I+ S++ +H E NI H D+KP N
Sbjct: 128 DSILKFDE-----YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN 182
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQR-------VYTYIQSRFYRSPEVILGLPYGPPIDMW 252
+L+ + G +K+ DFG S Y + Y ++ F+ + G +D+W
Sbjct: 183 ILMDKNG--RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSY----NGAKVDIW 236
Query: 253 SLG-CILAELYTGCPLFPGENEVEQLACI-MEILGCPPDEVINTASRRRLFFDSKGTPRC 310
SLG C+ Y P + VE I + + P D R +
Sbjct: 237 SLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLD-------RNHFLYP------- 282
Query: 311 ITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
+TN K+ S + S +DF+ + +R+T ++AL+HEWL
Sbjct: 283 LTN----KKSTCSNNFLS------NEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 50/253 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQG------FSLGLIRRFAFSLVQC 181
N++ F ++ L + +L++ ++ ++IK +G I +++
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY-------SHQRV-YTYIQSRF 233
L LH+ IH D+K N+LL + G S+++ DFG S + + +V T++ +
Sbjct: 134 LEYLHKNGQIHRDVKAGNILLGEDG--SVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 234 YRSPEVILGL-PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVI 292
+ +PEV+ + Y D+WS G EL TG + PP +V
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH---------------KYPPMKV- 235
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
L + P + G +D +L+ K+F ++ C D +KR
Sbjct: 236 -------LMLTLQNDPPSLET--------GVQD-KEMLKKYGKSFRKMISLCLQKDPEKR 279
Query: 353 LTPDEALRHEWLK 365
T E LRH++ +
Sbjct: 280 PTAAELLRHKFFQ 292
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQR----VYT 227
R ++ + L LH II+ DLK +NVLL G IK+ D+G C R
Sbjct: 109 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGM-CKEGLRPGDTTSX 165
Query: 228 YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+ + Y +PE++ G YG +D W+LG ++ E+ G
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---SSCYSHQRVYTY 228
R ++ + L LH II+ DLK +NVLL G IK+ D+G +
Sbjct: 113 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRPGDTTSXF 170
Query: 229 IQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTG 264
+ Y +PE++ G YG +D W+LG ++ E+ G
Sbjct: 171 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 114/298 (38%), Gaps = 56/298 (18%)
Query: 23 YEILEVIGKGSFGQV----------------IRALDHKTNTHALKYYGNQLTEFERTEIE 66
+E ++ +G+G FG V IR + + + L + E I
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 67 KYLEIWYLGLDACKIHGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADS 126
+Y W L+ +E + + DE+ + V+I R+ D S
Sbjct: 68 RYFNAW---LETPPEKWQEEMDE-IWLKDESTDWPLSSPSPMDAPSVKI----RRMDPFS 119
Query: 127 SYNVIHMLE------YFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQ 180
+ N + L+ Y Y + LC L + + +R + + G+ + +
Sbjct: 120 TKNTVGQLQPSSPKVYLYIQMQLCRKENLKDW----MNRRCSLEDREHGVCLHIFIQIAE 175
Query: 181 CLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYT-------- 227
+ LH + ++H DLKP N+ +KV DFG Q V T
Sbjct: 176 AVEFLHSKGLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH 233
Query: 228 --YIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI 283
+ ++ Y SPE I G Y +D++SLG IL EL L+ ++E++ I ++
Sbjct: 234 XGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL-----LYSFSTQMERVRIITDV 286
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 31/176 (17%)
Query: 130 VIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLL-HR 187
++ F + I+ ELM +L KR QG ++ + ++V+ L L +
Sbjct: 86 IVQCFGTFITNTDVFIAMELMGTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEK 143
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR-----FYRSPEVILG 242
+IH D+KP N+LL +RG IK+ DFG S + V + R Y +PE I
Sbjct: 144 HGVIHRDVKPSNILLDERG--QIKLCDFG---ISGRLVDDKAKDRSAGCAAYMAPERI-- 196
Query: 243 LPYGPP----------IDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPP 288
PP D+WSLG L EL TG FP +N + ++L P
Sbjct: 197 ---DPPDPTKPDYDIRADVWSLGISLVELATG--QFPYKNCKTDFEVLTKVLQEEP 247
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 131/362 (36%), Gaps = 113/362 (31%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYL-EIWYLGLDACKI 81
Y IL+ IG G +V + L+ K +A+KY L E + ++ Y EI YL
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--LEEADNQTLDSYRNEIAYL------- 61
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NK + H S +I + +Y
Sbjct: 62 -------------------NKLQQH--------------------SDKIIRLYDYEITDQ 82
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF--SLVQCLRLLHRENIIHCDLKPEN 199
++ + E N++L +K+ S+ R ++ ++++ + +H+ I+H DLKP N
Sbjct: 83 YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 138
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-----SRFYRSPEVILGLPYG-------- 246
L+ +K+IDFG + + ++ + Y PE I +
Sbjct: 139 FLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 195
Query: 247 ---PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFD 303
P D+WSLGCIL + G P ++IN S+ D
Sbjct: 196 KISPKSDVWSLGCILYYMTYG--------------------KTPFQQIINQISKLHAIID 235
Query: 304 SKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
N + KD+ VL+C C D K+R++ E L H +
Sbjct: 236 P--------NHEIEFPDIPEKDLQDVLKC-----------CLKRDPKQRISIPELLAHPY 276
Query: 364 LK 365
++
Sbjct: 277 VQ 278
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 50/253 (19%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQG------FSLGLIRRFAFSLVQC 181
N++ F ++ L + +L++ ++ ++IK +G I +++
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY-------SHQRV-YTYIQSRF 233
L LH+ IH D+K N+LL + G S+++ DFG S + + +V T++ +
Sbjct: 129 LEYLHKNGQIHRDVKAGNILLGEDG--SVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 234 YRSPEVILGL-PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVI 292
+ +PEV+ + Y D+WS G EL TG + PP +V
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH---------------KYPPMKV- 230
Query: 293 NTASRRRLFFDSKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKR 352
L + P + G +D +L+ K+F ++ C D +KR
Sbjct: 231 -------LMLTLQNDPPSLET--------GVQD-KEMLKKYGKSFRKMISLCLQKDPEKR 274
Query: 353 LTPDEALRHEWLK 365
T E LRH++ +
Sbjct: 275 PTAAELLRHKFFQ 287
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHR 187
N++ E HL I E + EL +R G FS R F L+ + H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS--HQRVYTYIQSRFYRSPEVILGLPY 245
+ H DLK EN LL + +K+ FG S S H + + + + Y +PEV+L Y
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEY 193
Query: 246 -GPPIDMWSLGCILAELYTGCPLFPGENEVE 275
G D+WS G L + G +P E+ E
Sbjct: 194 DGKVADVWSCGVTLYVMLVGA--YPFEDPEE 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R + +V + LHR +IH DLK N+ L + +K+
Sbjct: 101 SLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKI 156
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + Y +R + Y +PEV+ + +D+WS+GCI+ L G P F
Sbjct: 157 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R + +V + LHR +IH DLK N+ L + +K+
Sbjct: 125 SLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKI 180
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + Y +R + Y +PEV+ + +D+WS+GCI+ L G P F
Sbjct: 181 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 130/362 (35%), Gaps = 113/362 (31%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYL-EIWYLGLDACKI 81
Y IL+ IG G +V + L+ K +A+KY L E + ++ Y EI YL
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVN--LEEADNQTLDSYRNEIAYL------- 80
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
NK + H S +I + +Y
Sbjct: 81 -------------------NKLQQH--------------------SDKIIRLYDYEITDQ 101
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAF--SLVQCLRLLHRENIIHCDLKPEN 199
++ + E N++L +K+ S+ R ++ ++++ + +H+ I+H DLKP N
Sbjct: 102 YIYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 157
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-----SRFYRSPEVILGLPYG-------- 246
L+ +K+IDFG + ++ + Y PE I +
Sbjct: 158 FLIV---DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKS 214
Query: 247 ---PPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFD 303
P D+WSLGCIL + G P ++IN S+ D
Sbjct: 215 KISPKSDVWSLGCILYYMTYG--------------------KTPFQQIINQISKLHAIID 254
Query: 304 SKGTPRCITNSKGRKRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEW 363
N + KD+ VL+C C D K+R++ E L H +
Sbjct: 255 P--------NHEIEFPDIPEKDLQDVLKC-----------CLKRDPKQRISIPELLAHPY 295
Query: 364 LK 365
++
Sbjct: 296 VQ 297
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L EL KR + + R + +V + LHR +IH DLK N+ L + +K+
Sbjct: 127 SLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE--DLEVKI 182
Query: 213 IDFGSSC---YSHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
DFG + Y +R + Y +PEV+ + +D+WS+GCI+ L G P F
Sbjct: 183 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR 232
+ A + LH + IH D+K N+LL + + + K+ DFG + S + T + SR
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLDE--AFTAKISDFGLARASEKFAQTVMXSR 194
Query: 233 F-----YRSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
Y +PE + G P D++S G +L E+ TG P
Sbjct: 195 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP 232
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 116/287 (40%), Gaps = 63/287 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
+E + V+G+G+FGQV++A N +YY + + TE EK I
Sbjct: 8 FEEIAVLGQGAFGQVVKA----RNALDSRYYA--IKKIRHTE-EKLSTI----------- 49
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNH 142
LS+ N Y + ++ A +E R N + + ++
Sbjct: 50 ----LSEVMLLASLNHQYVVR--YYAAWLERR--------------NFVKPMTAVKKKST 89
Query: 143 LCISFEL-MNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L I E N LY+LI N R F +++ L +H + IIH DLKP N+
Sbjct: 90 LFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR-QILEALSYIHSQGIIHRDLKPMNIF 148
Query: 202 LKQRGSSSIKVIDFGSSCYSHQ-----------------RVYTYIQSRFYRSPEVILGLP 244
+ + S ++K+ DFG + H+ + + I + Y + EV+ G
Sbjct: 149 IDE--SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 245 -YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI-LGCPPD 289
Y IDM+SLG I E+ P G V L + + + PPD
Sbjct: 207 HYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPD 251
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 24/130 (18%)
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG---------------SSCY 220
+ + + LH + ++H DLKP N+ +KV DFG +
Sbjct: 125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTM--DDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 221 SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACI 280
++ R + ++ Y SPE I G Y +D++SLG IL EL L+P ++E++ +
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRTL 237
Query: 281 MEI--LGCPP 288
++ L PP
Sbjct: 238 TDVRNLKFPP 247
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY----TYI 229
+ +V L +H +IH D+KP+N+LL + G +K+ DFG+ + T +
Sbjct: 179 YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKLADFGTCMKMDETGMVHCDTAV 236
Query: 230 QSRFYRSPEVILGLP----YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIME 282
+ Y SPEV+ YG D WS+G L E+ G F ++ V + IM+
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD 293
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 116/287 (40%), Gaps = 63/287 (21%)
Query: 23 YEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKIH 82
+E + V+G+G+FGQV++A N +YY + + TE EK I
Sbjct: 8 FEEIAVLGQGAFGQVVKA----RNALDSRYYA--IKKIRHTE-EKLSTI----------- 49
Query: 83 GEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNH 142
LS+ N Y + ++ A +E R N + + ++
Sbjct: 50 ----LSEVMLLASLNHQYVVR--YYAAWLERR--------------NFVKPMTAVKKKST 89
Query: 143 LCISFEL-MNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
L I E N LY+LI N R F +++ L +H + IIH DLKP N+
Sbjct: 90 LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR-QILEALSYIHSQGIIHRDLKPMNIF 148
Query: 202 LKQRGSSSIKVIDFGSSCYSHQ-----------------RVYTYIQSRFYRSPEVILGLP 244
+ + S ++K+ DFG + H+ + + I + Y + EV+ G
Sbjct: 149 IDE--SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 245 -YGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEI-LGCPPD 289
Y IDM+SLG I E+ P G V L + + + PPD
Sbjct: 207 HYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPD 251
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRN-NYQGFSLGLIRRFAFSLVQCLRLLHR 187
N++ E HL I E + EL +R N FS R F L+ + H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGG--ELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS--HQRVYTYIQSRFYRSPEVILGLPY 245
+ H DLK EN LL + +K+ FG S S H + + + Y +PEV+L Y
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEY 193
Query: 246 -GPPIDMWSLGCILAELYTGCPLFPGENEVE 275
G D+WS G L + G +P E+ E
Sbjct: 194 DGKVADVWSCGVTLYVMLVGA--YPFEDPEE 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPE 238
V L + + +IH DLKP N+LL G + +K+ DFG++C + S + +PE
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWMAPE 173
Query: 239 VILGLPYGPPIDMWSLGCILAELYT 263
V G Y D++S G IL E+ T
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVIT 198
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPE 238
V L + + +IH DLKP N+LL G + +K+ DFG++C + S + +PE
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWMAPE 174
Query: 239 VILGLPYGPPIDMWSLGCILAELYT 263
V G Y D++S G IL E+ T
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVIT 199
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-CYSHQRVYTYIQSRFY--- 234
++ L LH I+H D+K +NVLL GS + + DFG + C + + + Y
Sbjct: 174 LEGLEYLHTRRILHGDVKADNVLLSSDGSRA-ALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 235 ----RSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
+PEV++G P +D+WS C++ + GC
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 267
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR 232
+ A + LH + IH D+K N+LL + + + K+ DFG + S + T + R
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLDE--AFTAKISDFGLARASEKFAQTVMXXR 194
Query: 233 F-----YRSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
Y +PE + G P D++S G +L E+ TG P
Sbjct: 195 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP 232
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-CYSHQRVYTYIQSRFY--- 234
++ L LH I+H D+K +NVLL GS + + DFG + C + + + Y
Sbjct: 160 LEGLEYLHTRRILHGDVKADNVLLSSDGSRA-ALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 235 ----RSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
+PEV++G P +D+WS C++ + GC
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-CYSHQRVYTYIQSRFY--- 234
++ L LH I+H D+K +NVLL GS + + DFG + C + + + Y
Sbjct: 176 LEGLEYLHTRRILHGDVKADNVLLSSDGSRA-ALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 235 ----RSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
+PEV++G P +D+WS C++ + GC
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 269
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 165
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 13/115 (11%)
Query: 158 IKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG- 216
++ +Q F L I R Q + LH +NIIH D+K N+ L + ++K+ DFG
Sbjct: 124 VQETKFQMFQLIDIAR---QTAQGMDYLHAKNIIHRDMKSNNIFLHE--GLTVKIGDFGL 178
Query: 217 ----SSCYSHQRVYTYIQSRFYRSPEVIL---GLPYGPPIDMWSLGCILAELYTG 264
S Q+V S + +PEVI P+ D++S G +L EL TG
Sbjct: 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 118 HLRKKDADSSYNVIHMLEYFYF-RNHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFA 175
H R ++ + E Y R L I E ++ L+ I+ Q F+
Sbjct: 64 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVL-LKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFY 234
S+ + ++ LH NI H D+KPEN+L +R ++ +K+ DFG +
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---------------- 167
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYTGCPLF 268
+ G Y DMWSLG I+ L G P F
Sbjct: 168 ---KETTGEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 112 EVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLI 171
E+ L +LR + Y+V+ + C EL + +I ++ ++
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDY----IISQDRLSEEETRVV 113
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ- 230
R +V + +H + H DLKPEN+L + +K+IDFG ++Q
Sbjct: 114 FR---QIVSAVAYVHSQGYAHRDLKPENLLFDEY--HKLKLIDFGLCAKPKGNKDYHLQT 168
Query: 231 ---SRFYRSPEVILGLPY-GPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIM 281
S Y +PE+I G Y G D+WS+G +L L G F +N + IM
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM 223
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR 232
+ A + LH + IH D+K N+LL + + + K+ DFG + S + SR
Sbjct: 128 KIAQGAANGINFLHENHHIHRDIKSANILLDE--AFTAKISDFGLARASEKFAQXVXXSR 185
Query: 233 F-----YRSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
Y +PE + G P D++S G +L E+ TG P
Sbjct: 186 IVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLP 223
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 165
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 165
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 165
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 165
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 106 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 163
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 165
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 165
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 107 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 164
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 16/146 (10%)
Query: 130 VIH--MLEYFYFRNHL-----CISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCL 182
V+H +++ F F H + + +M + +KR+ Q + + ++ L
Sbjct: 136 VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPAL 195
Query: 183 RLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRFYRSPEVILG 242
LH +++ DLKPEN++L + +K+ID G+ + Y Y F ++PE++
Sbjct: 196 SYLHSIGLVYNDLKPENIMLTEE---QLKLIDLGAVSRINSFGYLYGTPGF-QAPEIVR- 250
Query: 243 LPYGPPI--DMWSLGCILAELYTGCP 266
GP + D++++G LA L P
Sbjct: 251 --TGPTVATDIYTVGRTLAALTLDLP 274
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYT 227
+RF L+ + LH I H D+KPEN+LL +R ++K+ DFG + + +R+
Sbjct: 108 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRYNNRERLLN 165
Query: 228 YIQSRF-YRSPEVILGLPY-GPPIDMWSLGCILAELYTG 264
+ Y +PE++ + P+D+WS G +L + G
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 119/287 (41%), Gaps = 58/287 (20%)
Query: 98 GSYNK-KRFHHQAL---IEVRILDHLRKKDAD---------SSYNVIHMLEYFYFRNHLC 144
GSY++ KR H+A V+++D ++ ++ N+I + + + H+
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVY 97
Query: 145 ISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL-L 202
+ ELM L + I R + FS ++ + + LH + ++H DLKP N+L +
Sbjct: 98 LVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYV 155
Query: 203 KQRGSSS-IKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCIL 258
+ G+ +++ DFG + + + T + + +PEV+ Y D+WSLG +L
Sbjct: 156 DESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 259 AELYTG-CPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR 317
+ G P G ++ P+E++ + F S G ++ +
Sbjct: 216 YTMLAGYTPFANGPSDT-------------PEEILTRIGSGK-FTLSGGNWNTVSETAK- 260
Query: 318 KRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
D V++ + D +RLT + L+H W+
Sbjct: 261 ---------------------DLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 119/287 (41%), Gaps = 58/287 (20%)
Query: 98 GSYNK-KRFHHQAL---IEVRILDHLRKKDAD---------SSYNVIHMLEYFYFRNHLC 144
GSY++ KR H+A V+++D ++ ++ N+I + + + H+
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVY 97
Query: 145 ISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL-L 202
+ ELM L + I R + FS ++ + + LH + ++H DLKP N+L +
Sbjct: 98 LVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYV 155
Query: 203 KQRGSSS-IKVIDFGSSCY---SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCIL 258
+ G+ +++ DFG + + + T + + +PEV+ Y D+WSLG +L
Sbjct: 156 DESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 259 AELYTG-CPLFPGENEVEQLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGR 317
+ G P G ++ P+E++ + F S G ++ +
Sbjct: 216 YTMLAGYTPFANGPSDT-------------PEEILTRIGSGK-FTLSGGNWNTVSETAK- 260
Query: 318 KRKPGSKDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEALRHEWL 364
D V++ + D +RLT + L+H W+
Sbjct: 261 ---------------------DLVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 113/271 (41%), Gaps = 62/271 (22%)
Query: 23 YEILEVIGKGSFGQV-IRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
+EIL+VIG+G+F +V + + +A+K N+ +R E+ + E
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIM-NKWDMLKRGEVSCFRE----------- 110
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALIEVRILDHLRKKDADSSYNVIHMLEYFYFRN 141
E + NG +R+ Q H +D + Y V +EY+
Sbjct: 111 --ERDVLVNG----------DRRWITQL--------HFAFQDENYLYLV---MEYY---- 143
Query: 142 HLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVL 201
+ +L+ L L + +R + + R + +V + +HR +H D+KP+N+L
Sbjct: 144 ---VGGDLLTL-LSKFGERIPAE-----MARFYLAEIVMAIDSVHRLGYVHRDIKPDNIL 194
Query: 202 LKQRGSSSIKVIDFGS----SCYSHQRVYTYIQSRFYRSPEVILGL-------PYGPPID 250
L + G I++ DFGS R + + Y SPE++ + YGP D
Sbjct: 195 LDRCG--HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECD 252
Query: 251 MWSLGCILAELYTGCPLFPGENEVEQLACIM 281
W+LG E++ G F ++ E I+
Sbjct: 253 WWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 170 LIRRFAFSLVQCLRLLHRENI---IHCDLKPENVLLKQR------GSSSIKVIDFGSSCY 220
++ +A + + + LH E I IH DLK N+L+ Q+ + +K+ DFG +
Sbjct: 106 ILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165
Query: 221 SHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPG 270
H+ + + +PEVI + D+WS G +L EL TG F G
Sbjct: 166 WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR 232
+ A + LH + IH D+K N+LL + + + K+ DFG + S + + R
Sbjct: 131 KIAQGAANGINFLHENHHIHRDIKSANILLDE--AFTAKISDFGLARASEKFAQXVMXXR 188
Query: 233 F-----YRSPEVILGLPYGPPIDMWSLGCILAELYTGCP 266
Y +PE + G P D++S G +L E+ TG P
Sbjct: 189 IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 151 NLNLYELIKRNNYQGF--------SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL 202
NL+ Y KRN + + +L + ++F + + + L IH DL N+LL
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 177
Query: 203 KQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCI 257
++ + +K+ DFG + Y +R + +PE I Y D+WS G +
Sbjct: 178 SEK--NVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 235
Query: 258 LAELYT-GCPLFPG 270
L E+++ G +PG
Sbjct: 236 LWEIFSLGASPYPG 249
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 109 ALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSL 168
AL+E+++L ++D NVI L I+ EL NLNL +L++ N +L
Sbjct: 73 ALMEIKLL-----TESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENL 127
Query: 169 GLIRRF-AFSLVQCLRL----LHRENIIHCDLKPENVLL---------KQRGSSSIKVI- 213
L + + SL++ + LH IIH DLKP+N+L+ +Q G+ +++++
Sbjct: 128 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 214 -DFG--SSCYSHQRVYTY-----IQSRFYRSPEVI---LGLPYGPPIDMWSLGCIL 258
DFG S Q + + +R+PE++ ID++S+GC+
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 109 ALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSL 168
AL+E+++L ++D NVI L I+ EL NLNL +L++ N +L
Sbjct: 73 ALMEIKLL-----TESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENL 127
Query: 169 GLIRRF-AFSLVQCLRL----LHRENIIHCDLKPENVLL---------KQRGSSSIKVI- 213
L + + SL++ + LH IIH DLKP+N+L+ +Q G+ +++++
Sbjct: 128 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 214 -DFG--SSCYSHQRVYTY-----IQSRFYRSPEVI---LGLPYGPPIDMWSLGCIL 258
DFG S Q + + +R+PE++ ID++S+GC+
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVF 243
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-CYSHQRVYT------YIQ- 230
++ L LH I+H D+K +NVLL GS + + DFG + C + YI
Sbjct: 176 LEGLEYLHSRRILHGDVKADNVLLSSDGSHA-ALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 231 SRFYRSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
+ + +PEV+LG +D+WS C++ + GC
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGC 269
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 179 VQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-CYSHQRVYTYIQSRFY--- 234
++ L LH I+H D+K +NVLL GS + + DFG + C + + + Y
Sbjct: 195 LEGLEYLHSRRILHGDVKADNVLLSSDGSHAA-LCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 235 ----RSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
+PEV+LG +D+WS C++ + GC
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGC 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYS 221
F + + A + + LH ++IIH DLK N+ L + +++K+ DFG S +S
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE--DNTVKIGDFGLATEKSRWS 174
Query: 222 HQRVYTYIQ-SRFYRSPEVIL---GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
+ + S + +PEVI PY D+++ G +L EL TG + N +Q
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ- 233
Query: 278 ACIMEILG 285
I+E++G
Sbjct: 234 --IIEMVG 239
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 151 NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSI 210
N LY+LI N R F +++ L +H + IIH +LKP N+ + + S ++
Sbjct: 99 NRTLYDLIHSENLNQQRDEYWRLFR-QILEALSYIHSQGIIHRNLKPXNIFIDE--SRNV 155
Query: 211 KVIDFGSSCYSHQ-----------------RVYTYIQSRFYRSPEVILGLP-YGPPIDMW 252
K+ DFG + H+ + + I + Y + EV+ G Y ID +
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXY 215
Query: 253 SLGCILAELYTGCPLFPGENEVEQLACIMEI-LGCPPD 289
SLG I E P G V L + + + PPD
Sbjct: 216 SLGIIFFEXI--YPFSTGXERVNILKKLRSVSIEFPPD 251
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYS 221
F + + A + + LH ++IIH DLK N+ L + +++K+ DFG S +S
Sbjct: 117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE--DNTVKIGDFGLATEKSRWS 174
Query: 222 HQRVYTYIQ-SRFYRSPEVIL---GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
+ + S + +PEVI PY D+++ G +L EL TG + N +Q
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ- 233
Query: 278 ACIMEILG 285
I+E++G
Sbjct: 234 --IIEMVG 239
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYS 221
F + + A + + LH ++IIH DLK N+ L + +++K+ DFG S +S
Sbjct: 105 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHE--DNTVKIGDFGLATVKSRWS 162
Query: 222 HQRVYTYIQ-SRFYRSPEVIL---GLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
+ + S + +PEVI PY D+++ G +L EL TG + N +Q
Sbjct: 163 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ- 221
Query: 278 ACIMEILG 285
I+E++G
Sbjct: 222 --IIEMVG 227
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY------------- 220
FA + + LH NIIH DL N L+++ + ++ V DFG +
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLVRE--NKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 221 ----SHQRVYTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAEL 261
++ YT + + ++ +PE+I G Y +D++S G +L E+
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF--- 233
+ + + L + +H DL N L+ +G +KV DFG S Y YT + S+F
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEYTSSVGSKFPVR 177
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ PEV++ + D+W+ G ++ E+Y+
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF--- 233
+ + + L + +H DL N L+ +G +KV DFG S Y YT + S+F
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEYTSSVGSKFPVR 170
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ PEV++ + D+W+ G ++ E+Y+
Sbjct: 171 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF--- 233
+ + + L + +H DL N L+ +G +KV DFG S Y YT + S+F
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ PEV++ + D+W+ G ++ E+Y+
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 65/268 (24%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
R + + +G+G+FGQVI A +G T RT K L+
Sbjct: 28 RLNLGKPLGRGAFGQVIEA----------DAFGIDKTATXRTVAVKMLK----------- 66
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALI-EVRILDHLRKKDADSSYNVIHMLEYFYFR 140
E ++++ H+AL+ E++IL H+ NV+++L
Sbjct: 67 --------------EGATHSE----HRALMSELKILIHI-----GHHLNVVNLLGACTKP 103
Query: 141 N---HLCISF-ELMNLNLYELIKRNNYQGF--------SLGLIRRFAFSLVQCLRLLHRE 188
+ + F + NL+ Y KRN + + +L + ++F + + + L
Sbjct: 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR 163
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRF---YRSPEVILGL 243
IH DL N+LL ++ + +K+ DFG + Y +R + +PE I
Sbjct: 164 KXIHRDLAARNILLSEK--NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 221
Query: 244 PYGPPIDMWSLGCILAELYT-GCPLFPG 270
Y D+WS G +L E+++ G +PG
Sbjct: 222 VYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 180 QCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF---YR 235
+ + L + +H DL N L+ +G +KV DFG S Y YT + S+F +
Sbjct: 111 EAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 168
Query: 236 SPEVILGLPYGPPIDMWSLGCILAELYT 263
PEV++ + D+W+ G ++ E+Y+
Sbjct: 169 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 180 QCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF---YR 235
+ + L + +H DL N L+ +G +KV DFG S Y YT + S+F +
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 173
Query: 236 SPEVILGLPYGPPIDMWSLGCILAELYT 263
PEV++ + D+W+ G ++ E+Y+
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGETGKYLRLP 363
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 364 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR 421
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIMEI- 283
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 481
Query: 284 -LGCPPD 289
+ CPP+
Sbjct: 482 RMPCPPE 488
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-SR 232
F+ + + + + R+N IH DL+ NVL+ + S K+ DFG + YT + ++
Sbjct: 115 FSAQIAEGMAYIERKNYIHRDLRAANVLVSE--SLMCKIADFGLARVIEDNEYTAREGAK 172
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIMEILGCP- 287
F + +PE I + D+WS G +L E+ T G +PG + + + + P
Sbjct: 173 FPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPR 232
Query: 288 ----PDEV 291
PDE+
Sbjct: 233 VENCPDEL 240
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 21/124 (16%)
Query: 109 ALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSL 168
AL+E+++L ++D NVI L I+ EL NLNL +L++ N +L
Sbjct: 55 ALMEIKLL-----TESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENL 109
Query: 169 GLIRRF-AFSLVQCLRL----LHRENIIHCDLKPENVLL---------KQRGSSSIKVI- 213
L + + SL++ + LH IIH DLKP+N+L+ +Q G+ +++++
Sbjct: 110 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169
Query: 214 -DFG 216
DFG
Sbjct: 170 SDFG 173
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 21/124 (16%)
Query: 109 ALIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSL 168
AL+E+++L ++D NVI L I+ EL NLNL +L++ N +L
Sbjct: 55 ALMEIKLL-----TESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENL 109
Query: 169 GLIRRF-AFSLVQCLRL----LHRENIIHCDLKPENVLL---------KQRGSSSIKVI- 213
L + + SL++ + LH IIH DLKP+N+L+ +Q G+ +++++
Sbjct: 110 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169
Query: 214 -DFG 216
DFG
Sbjct: 170 SDFG 173
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 51/216 (23%)
Query: 173 RFAFSLVQCLRLLHRE---------NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY--- 220
R A S+ + L LH E I H DL NVL+K G+ I DFG S
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS--DFGLSMRLTG 172
Query: 221 --------SHQRVYTYIQSRFYRSPEVILGL-------PYGPPIDMWSLGCILAELYTGC 265
+ + + Y +PEV+ G +DM++LG I E++ C
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRC 232
Query: 266 P-LFPGENEVE-QLACIMEILGCPPDEVINTASRRRLFFDSKGTPRCITNSKGRKRKPGS 323
LFPGE+ E Q+A E+ P E + ++ K R + P +
Sbjct: 233 TDLFPGESVPEYQMAFQTEVGNHPTFEDMQV---------------LVSREKQRPKFPEA 277
Query: 324 -KDMASVLRCNDKAFVDFVTQCFNWDSKKRLTPDEA 358
K+ + +R + + + C++ D++ RLT A
Sbjct: 278 WKENSLAVR----SLKETIEDCWDQDAEARLTAQXA 309
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGETGKYLRLP 280
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR 338
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 399 RMPCPPE 405
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGETGKYLRLP 280
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR 338
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 399 RMPCPPE 405
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 143 LCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL 202
+C+ FE M R F+ + + + + L ++IH DL N L+
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLV 136
Query: 203 KQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF---YRSPEVILGLPYGPPIDMWSLGCIL 258
+ + IKV DFG + + YT ++F + SPEV Y D+WS G ++
Sbjct: 137 GE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 194
Query: 259 AELYT 263
E+++
Sbjct: 195 WEVFS 199
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 155 YELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVI 213
Y++ + Y+ F +L + ++F + + + L IH DL N+LL ++ + +K+
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKIC 190
Query: 214 DFGSS--CYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + Y +R + +PE I Y D+WS G +L E+++ G
Sbjct: 191 DFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 268 FPG 270
+PG
Sbjct: 251 YPG 253
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
++F + + + L IH DL N+LL ++ + +K+ DFG + Y +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G +L E+++ G +PG
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 296
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
++F + + + L IH DL N+LL ++ + +K+ DFG + Y +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G +L E+++ G +PG
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 305
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
++F + + + L IH DL N+LL ++ + +K+ DFG + Y +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G +L E+++ G +PG
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 303
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 19/189 (10%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSL 168
L E +I+ L+ Y V+ + I E MN +L + +K + L
Sbjct: 52 LEEAQIMKKLKHDKLVQLYAVVS-------EEPIYIVTEYMNKGSLLDFLKDGEGRALKL 104
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSI-KVIDFGSSCYSHQRVYT 227
+ A + + + R N IH DL+ N+L+ G+ I K+ DFG + T
Sbjct: 105 PNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV---GNGLICKIADFGLARLIEDNEXT 161
Query: 228 YIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME 282
Q ++F + +PE L + D+WS G +L EL T G +PG N E L +
Sbjct: 162 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
Query: 283 --ILGCPPD 289
+ CP D
Sbjct: 222 GYRMPCPQD 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 155 YELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVI 213
Y++ + Y+ F +L + ++F + + + L IH DL N+LL ++ + +K+
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKIC 181
Query: 214 DFGSS--CYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + Y +R + +PE I Y D+WS G +L E+++ G
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 268 FPG 270
+PG
Sbjct: 242 YPG 244
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 155 YELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVI 213
Y++ + Y+ F +L + ++F + + + L IH DL N+LL ++ + +K+
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKIC 181
Query: 214 DFGSS--CYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + Y +R + +PE I Y D+WS G +L E+++ G
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 268 FPG 270
+PG
Sbjct: 242 YPG 244
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 227 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKG------SLLDFLKGETGKYLRLP 280
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR 338
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 399 RMPCPPE 405
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
++F + + + L IH DL N+LL ++ + +K+ DFG + Y +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G +L E+++ G +PG
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 298
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATEKSRWSGSHQFEQL 194
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR 232
+F+ + + + L N +H DL NVL+ + + KV DFG + + T
Sbjct: 112 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQDTGKLPV 169
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYT-------GCPLFPGENEVEQLACIMEILG 285
+ +PE + + D+WS G +L E+Y+ PL VE+ + G
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 229
Query: 286 CPP 288
CPP
Sbjct: 230 CPP 232
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 155 YELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVI 213
Y++ + Y+ F +L + ++F + + + L IH DL N+LL ++ + +K+
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKIC 190
Query: 214 DFGSS--CYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + Y +R + +PE I Y D+WS G +L E+++ G
Sbjct: 191 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 268 FPG 270
+PG
Sbjct: 251 YPG 253
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSL 168
L E +++ LR + Y V+ + I E MN +L + +K + L
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVS-------EEPIYIVTEYMNKGSLLDFLKGETGKYLRL 110
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY 228
+ + + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 111 PQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTA 168
Query: 229 IQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 228
Query: 283 -ILGCPPD 289
+ CPP+
Sbjct: 229 YRMPCPPE 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 187 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATVKSRWSGSHQFEQL 193
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 194 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATVKSRWSGSHQFEQL 194
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 155 YELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVI 213
Y++ + Y+ F +L + ++F + + + L IH DL N+LL ++ + +K+
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKIC 227
Query: 214 DFGSS--CYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + Y +R + +PE I Y D+WS G +L E+++ G
Sbjct: 228 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
Query: 268 FPG 270
+PG
Sbjct: 288 YPG 290
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF--- 233
+ + + L + +H DL N L+ +G +KV DFG S Y YT + S+F
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEYTSSRGSKFPVR 171
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ PEV++ + D+W+ G ++ E+Y+
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 164 QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYS 221
+ ++G + FA+ + Q ++ L +++H DL N+L+ + +K+ DFG S Y
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAE--GRKMKISDFGLSRDVYE 202
Query: 222 HQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
Q R + + E + Y D+WS G +L E+ T G +PG
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR 232
+F+ + + + L N +H DL NVL+ + + KV DFG + + T
Sbjct: 121 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQDTGKLPV 178
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYT-------GCPLFPGENEVEQLACIMEILG 285
+ +PE + + D+WS G +L E+Y+ PL VE+ + G
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 238
Query: 286 CPP 288
CPP
Sbjct: 239 CPP 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
++F + + + L IH DL N+LL ++ + +K+ DFG + Y +
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G +L E+++ G +PG
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 164 QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYS 221
+ ++G + FA+ + Q ++ L ++H DL N+L+ + +K+ DFG S Y
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDVYE 202
Query: 222 HQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
Q R + + E + Y D+WS G +L E+ T G +PG
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 67/270 (24%)
Query: 22 RYEILEVIGKGSFGQVIRALDHKTNTHALKYYGNQLTEFERTEIEKYLEIWYLGLDACKI 81
R ++ + +G+G+FGQVI A +G T RT K L+
Sbjct: 30 RLKLGKPLGRGAFGQVIEA----------DAFGIDKTATXRTVAVKMLK----------- 68
Query: 82 HGEESLSQNGGFDDENGSYNKKRFHHQALI-EVRILDHLRKKDADSSYNVIHMLEYFYFR 140
E ++++ H+AL+ E++IL H+ NV+++L
Sbjct: 69 --------------EGATHSE----HRALMSELKILIHI-----GHHLNVVNLLGACTKP 105
Query: 141 N---HLCISF-ELMNLNLYELIKRNNYQGF----------SLGLIRRFAFSLVQCLRLLH 186
+ + F + NL+ Y KRN + + +L + ++F + + + L
Sbjct: 106 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLA 165
Query: 187 RENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRF---YRSPEVIL 241
IH DL N+LL ++ + +K+ DFG + +R + +PE I
Sbjct: 166 SRKXIHRDLAARNILLSEK--NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF 223
Query: 242 GLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
Y D+WS G +L E+++ G +PG
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR 232
+F+ + + + L N +H DL NVL+ + + KV DFG + + T
Sbjct: 293 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQDTGKLPV 350
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYT-------GCPLFPGENEVEQLACIMEILG 285
+ +PE + + D+WS G +L E+Y+ PL VE+ + G
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 410
Query: 286 CPP 288
CPP
Sbjct: 411 CPP 413
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR 232
+F+ + + + L N +H DL NVL+ + + KV DFG + + T
Sbjct: 106 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 233 FYRSPEVILGLPYGPPIDMWSLGCILAELYT-------GCPLFPGENEVEQLACIMEILG 285
+ +PE + + D+WS G +L E+Y+ PL VE+ + G
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 223
Query: 286 CPP 288
CPP
Sbjct: 224 CPP 226
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 172 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 164 QGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYS 221
+ ++G + FA+ + Q ++ L ++H DL N+L+ + +K+ DFG S Y
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDVYE 202
Query: 222 HQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
Q R + + E + Y D+WS G +L E+ T G +PG
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 54 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGETGKYLRLP 107
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 108 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR 165
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 166 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 225
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 226 RMPCPPE 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 172 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 143 LCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL 202
+C+ FE M R F+ + + + + L +IH DL N L+
Sbjct: 80 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV 139
Query: 203 KQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF---YRSPEVILGLPYGPPIDMWSLGCIL 258
+ + IKV DFG + + YT ++F + SPEV Y D+WS G ++
Sbjct: 140 GE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 197
Query: 259 AELYT 263
E+++
Sbjct: 198 WEVFS 202
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATEKSRWSGSHQFEQL 166
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 111 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATVKSRWSGSHQFEQL 168
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 169 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
++F + + + L IH DL N+LL + ++ +K+ DFG + Y + +
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G +L E+++ G +PG
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPG 304
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 143 LCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL 202
+C+ FE M R F+ + + + + L +IH DL N L+
Sbjct: 75 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV 134
Query: 203 KQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF---YRSPEVILGLPYGPPIDMWSLGCIL 258
+ + IKV DFG + + YT ++F + SPEV Y D+WS G ++
Sbjct: 135 GE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 192
Query: 259 AELYT 263
E+++
Sbjct: 193 WEVFS 197
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 228 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGEMGKYLRLP 281
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG YT
Sbjct: 282 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLGRLIEDNEYTAR 339
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 340 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 399
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 400 RMPCPPE 406
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG----SSCYSHQRVYTYI 229
A Q + LH ++IIH DLK N+ L + ++K+ DFG S +S + +
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHE--DLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 230 Q-SRFYRSPEVILGL---PYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
S + +PEVI PY D+++ G +L EL TG + N +Q+
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 143 LCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL 202
+C+ FE M R F+ + + + + L +IH DL N L+
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV 136
Query: 203 KQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF---YRSPEVILGLPYGPPIDMWSLGCIL 258
+ + IKV DFG + + YT ++F + SPEV Y D+WS G ++
Sbjct: 137 GE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 194
Query: 259 AELYT 263
E+++
Sbjct: 195 WEVFS 199
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSL 168
L E +++ LR + Y V+ + I E M+ +L + +K + L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVS-------EEPIYIVIEYMSKGSLLDFLKGEMGKYLRL 113
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY 228
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTA 171
Query: 229 IQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 283 -ILGCPPD 289
+ CPP+
Sbjct: 232 YRMPCPPE 239
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ-SR 232
F+ + + + + R+N IH DL+ NVL+ + S K+ DFG + YT + ++
Sbjct: 114 FSAQIAEGMAYIERKNYIHRDLRAANVLVSE--SLMCKIADFGLARVIEDNEYTAREGAK 171
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIMEILGCP- 287
F + +PE I + ++WS G +L E+ T G +PG + ++ + + P
Sbjct: 172 FPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPR 231
Query: 288 ----PDEV 291
PDE+
Sbjct: 232 MENCPDEL 239
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSS--- 209
+L++L R FSL + A L+ + +H +N+I+ D+KPEN L+ + G+ +
Sbjct: 93 DLFDLCDRT----FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQV 148
Query: 210 IKVIDFG 216
I +IDFG
Sbjct: 149 IHIIDFG 155
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 143 LCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL 202
+C+ FE M R F+ + + + + L +IH DL N L+
Sbjct: 97 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV 156
Query: 203 KQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF---YRSPEVILGLPYGPPIDMWSLGCIL 258
+ + IKV DFG + + YT ++F + SPEV Y D+WS G ++
Sbjct: 157 GE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 214
Query: 259 AELYT 263
E+++
Sbjct: 215 WEVFS 219
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L + +K + L + F+ + + + + + N IH DL+ N+L+ S K+
Sbjct: 268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS--ASLVCKI 325
Query: 213 IDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + YT + ++F + +PE I + D+WS G +L E+ T G
Sbjct: 326 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
Query: 268 FPGENEVEQLACIMEILGCP-----PDEVINTASR 297
+PG + E + + P P+E+ N R
Sbjct: 386 YPGMSNPEVIRALERGYRMPRPENCPEELYNIMMR 420
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSL 168
L E +++ LR + Y V+ + I E M+ L + +K + L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVS-------EEPIYIVMEYMSKGCLLDFLKGEMGKYLRL 113
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY 228
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTA 171
Query: 229 IQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 283 -ILGCPPD 289
+ CPP+
Sbjct: 232 YRMPCPPE 239
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSL 168
L E +++ LR + Y V+ + I E MN +L + +K + L
Sbjct: 58 LQEAQVMKKLRHEKLVQLYAVVS-------EEPIYIVTEYMNKGSLLDFLKGETGKYLRL 110
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY 228
+ + + + + R N +H DL+ N+L+ + + KV DFG + +T
Sbjct: 111 PQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEWTA 168
Query: 229 IQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 228
Query: 283 -ILGCPPD 289
+ CPP+
Sbjct: 229 YRMPCPPE 236
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGEMGKYLRLP 114
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR 172
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 233 RMPCPPE 239
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L + +K + L + F+ + + + + + N IH DL+ N+L+ S K+
Sbjct: 95 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS--ASLVCKI 152
Query: 213 IDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + YT + ++F + +PE I + D+WS G +L E+ T G
Sbjct: 153 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
Query: 268 FPGENEVEQLACIMEILGCP-----PDEVINTASR 297
+PG + E + + P P+E+ N R
Sbjct: 213 YPGMSNPEVIRALERGYRMPRPENCPEELYNIMMR 247
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 52 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGEMGKYLRLP 105
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 106 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR 163
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 164 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 223
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 224 RMPCPPE 230
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 50 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGEMGKYLRLP 103
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 104 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR 161
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 162 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 221
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 222 RMPCPPE 228
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 151 NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSI 210
N +L + +K + ++ + A + + + + N IH DL+ N+L+ + S
Sbjct: 86 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSC 143
Query: 211 KVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GC 265
K+ DFG + YT + ++F + +PE I + D+WS G +L E+ T G
Sbjct: 144 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
Query: 266 PLFPG 270
+PG
Sbjct: 204 IPYPG 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH DL+ N+L+
Sbjct: 90 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 149
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + YT + ++F + +PE I + D+WS G +L E
Sbjct: 150 --TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 207
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 208 IVTHGRIPYPG 218
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 7/127 (5%)
Query: 149 LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSS 208
+ N +L + +K + ++ + A + + + + N IH DL+ N+L+ +
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TL 146
Query: 209 SIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT- 263
S K+ DFG + YT + ++F + +PE I + D+WS G +L E+ T
Sbjct: 147 SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 206
Query: 264 GCPLFPG 270
G +PG
Sbjct: 207 GRIPYPG 213
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSS--- 209
+L++L R F+L + A L+ + +H +N+I+ D+KPEN L+ ++G+
Sbjct: 85 DLFDLCDRT----FTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHV 140
Query: 210 IKVIDFG 216
I +IDFG
Sbjct: 141 IHIIDFG 147
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH DL+ N+L+
Sbjct: 91 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 150
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + YT + ++F + +PE I + D+WS G +L E
Sbjct: 151 --TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 209 IVTHGRIPYPG 219
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH DL+ N+L+
Sbjct: 95 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 154
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + YT + ++F + +PE I + D+WS G +L E
Sbjct: 155 --TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 212
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 213 IVTHGRIPYPG 223
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS-HQRVYTYIQSRF--- 233
+ + + L + +H DL N L+ +G +KV DFG S Y + + S+F
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGV--VKVSDFGLSRYVLDDEETSSVGSKFPVR 186
Query: 234 YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ PEV++ + D+W+ G ++ E+Y+
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLN-LYELIKRNNYQGFSL 168
L E +++ LR + Y V+ + I E M+ L + +K + L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVS-------EEPIYIVTEYMSKGCLLDFLKGEMGKYLRL 113
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY 228
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTA 171
Query: 229 IQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 283 -ILGCPPD 289
+ CPP+
Sbjct: 232 YRMPCPPE 239
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSL 168
L E +++ LR + Y V+ + I E M+ +L + +K + L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVS-------EEPIYIVCEYMSKGSLLDFLKGEMGKYLRL 113
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY 228
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTA 171
Query: 229 IQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 283 -ILGCPPD 289
+ CPP+
Sbjct: 232 YRMPCPPE 239
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ LR + Y V+ + ++ +L + +K + L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGEMGKYLRLP 114
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL N+L+ + + KV DFG + YT
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLAAANILVGE--NLVCKVADFGLARLIEDNEYTAR 172
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 233 RMPCPPE 239
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLG 169
L E +++ +R + Y V+ + ++ +L + +K + L
Sbjct: 61 LQEAQVMKKIRHEKLVQLYAVVSEEPIYIVTEYMSKG------SLLDFLKGEMGKYLRLP 114
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYI 229
+ A + + + R N +H DL+ N+L+ + + KV DFG + YT
Sbjct: 115 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTAR 172
Query: 230 Q-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME-- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
Query: 283 ILGCPPD 289
+ CPP+
Sbjct: 233 RMPCPPE 239
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 155 YELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVI 213
Y++ + Y+ F +L + ++F + + + L IH DL N+LL ++ + +K+
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKIC 181
Query: 214 DFGSS--CYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + +R + +PE I Y D+WS G +L E+++ G
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 268 FPG 270
+PG
Sbjct: 242 YPG 244
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 155 YELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVI 213
Y++ + Y+ F +L + ++F + + + L IH DL N+LL ++ + +K+
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKIC 181
Query: 214 DFGSS--CYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + +R + +PE I Y D+WS G +L E+++ G
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 268 FPG 270
+PG
Sbjct: 242 YPG 244
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 155 YELIKRNNYQGF-SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVI 213
Y++ + Y+ F +L + ++F + + + L IH DL N+LL ++ + +K+
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKIC 190
Query: 214 DFGSS--CYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPL 267
DFG + +R + +PE I Y D+WS G +L E+++ G
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 268 FPG 270
+PG
Sbjct: 251 YPG 253
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 157 LIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDF 215
L + +QG F LG + R+A + + + L + IH DL N+LL R +K+ DF
Sbjct: 102 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDF 159
Query: 216 GSSCYSHQRVYTYIQSRFYR------SPEVILGLPYGPPIDMWSLGCILAELYT 263
G Q Y+ + +PE + + D W G L E++T
Sbjct: 160 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 157 LIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDF 215
L + +QG F LG + R+A + + + L + IH DL N+LL R +K+ DF
Sbjct: 102 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDF 159
Query: 216 GSSCYSHQRVYTYIQSRFYR------SPEVILGLPYGPPIDMWSLGCILAELYT 263
G Q Y+ + +PE + + D W G L E++T
Sbjct: 160 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 157 LIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDF 215
L + +QG F LG + R+A + + + L + IH DL N+LL R +K+ DF
Sbjct: 108 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDF 165
Query: 216 GSSCYSHQRVYTYIQSRFYR------SPEVILGLPYGPPIDMWSLGCILAELYT 263
G Q Y+ + +PE + + D W G L E++T
Sbjct: 166 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 157 LIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDF 215
L + +QG F LG + R+A + + + L + IH DL N+LL R +K+ DF
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDF 155
Query: 216 GSSCYSHQRVYTYIQSRFYR------SPEVILGLPYGPPIDMWSLGCILAELYT 263
G Q Y+ + +PE + + D W G L E++T
Sbjct: 156 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 9/114 (7%)
Query: 157 LIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDF 215
L + +QG F LG + R+A + + + L + IH DL N+LL R +K+ DF
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDF 155
Query: 216 GSSCYSHQRVYTYIQSRFYR------SPEVILGLPYGPPIDMWSLGCILAELYT 263
G Q Y+ + +PE + + D W G L E++T
Sbjct: 156 GLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 21/110 (19%)
Query: 186 HRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYIQSRFYRSPEVI 240
H+ I H D+K +NVLLK ++ I DFG + S + + +R Y +PEV+
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIA--DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 241 LGL-----PYGPPIDMWSLGCILAELYTGCP---------LFPGENEVEQ 276
G IDM+++G +L EL + C + P E E+ Q
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
++F + + + L IH DL N+LL ++ + +K+ DFG + +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G +L E+++ G +PG
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSS--- 209
+L++L R FSL + A L+ + +H +N+I+ D+KPEN L+ + G+ +
Sbjct: 114 DLFDLCDRT----FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQV 169
Query: 210 IKVIDFG 216
I +IDF
Sbjct: 170 IHIIDFA 176
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY--TYIQSR 232
A+ + + + L + IH DL NVL+ + + +K+ DFG + H Y R
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGR 202
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G +L E++T G +PG
Sbjct: 203 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 244
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR--FYRSPEVILG 242
LH + ++H D+KP N+ L RG K+ DFG +Q Y +PE++ G
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRG--RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG 230
Query: 243 LPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQL 277
YG D++SLG + E+ L G +QL
Sbjct: 231 -SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY--TYIQSR 232
A+ + + + L + IH DL NVL+ + + +K+ DFG + H Y R
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G +L E++T G +PG
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSS--- 209
+L++L R FSL + A L+ + +H +N+I+ D+KPEN L+ + G+ +
Sbjct: 93 DLFDLCDRT----FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQV 148
Query: 210 IKVIDFG 216
I +IDF
Sbjct: 149 IHIIDFA 155
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY--TYIQSR 232
A+ + + + L + IH DL NVL+ + + +K+ DFG + H Y R
Sbjct: 149 AYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGR 206
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G +L E++T G +PG
Sbjct: 207 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 248
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY--TYIQSR 232
A+ + + + L + IH DL NVL+ + + +K+ DFG + H Y R
Sbjct: 148 AYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGR 205
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G +L E++T G +PG
Sbjct: 206 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY--TYIQSR 232
A+ + + + L + IH DL NVL+ + + +K+ DFG + H Y R
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G +L E++T G +PG
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY--TYIQSR 232
A+ + + + L + IH DL NVL+ + + +K+ DFG + H Y R
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGR 254
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G +L E++T G +PG
Sbjct: 255 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY--TYIQSR 232
A+ + + + L + IH DL NVL+ + + +K+ DFG + H Y R
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGR 198
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G +L E++T G +PG
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 240
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSS---S 209
+L++L R F+L + A L+ + +H +++I+ D+KPEN L+ + G+ +
Sbjct: 88 DLFDLCDRT----FTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHA 143
Query: 210 IKVIDFG 216
I +IDFG
Sbjct: 144 IHIIDFG 150
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSL 168
L E +++ LR + Y V+ + I E M+ +L + +K + L
Sbjct: 51 LQEAQVMKKLRHEKLVQLYAVVS-------EEPIXIVTEYMSKGSLLDFLKGETGKYLRL 103
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY 228
+ A + + + R N +H DL+ N+L+ + + KV DFG + T
Sbjct: 104 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEXTA 161
Query: 229 IQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 162 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 221
Query: 283 -ILGCPPD 289
+ CPP+
Sbjct: 222 YRMPCPPE 229
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY--TYIQSR 232
A+ + + + L + IH DL NVL+ + + +K+ DFG + H Y R
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G +L E++T G +PG
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFG-SSCYSHQ 223
FSL + A ++ + +H +N IH D+KP+N L+ + + + +IDFG + Y
Sbjct: 100 FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 159
Query: 224 RVYTYIQSR---------FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPG 270
R + +I R Y S LG+ D+ SLG +L G + G
Sbjct: 160 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG 215
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFG-SSCYSHQ 223
FSL + A ++ + +H +N IH D+KP+N L+ + + + +IDFG + Y
Sbjct: 102 FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161
Query: 224 RVYTYIQSR---------FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPG 270
R + +I R Y S LG+ D+ SLG +L G + G
Sbjct: 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG 217
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSIKVIDFG-SSCYSHQ 223
FSL + A ++ + +H +N IH D+KP+N L+ + + + +IDFG + Y
Sbjct: 102 FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161
Query: 224 RVYTYIQSR---------FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPG 270
R + +I R Y S LG+ D+ SLG +L G + G
Sbjct: 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG 217
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQ 230
++A + + + L +H DL NVL++ +K+ DFG + + + T
Sbjct: 118 KYAVQICKGMDYLGSRQYVHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEXXTVKD 175
Query: 231 SR----FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILG 285
R F+ +PE ++ + D+WS G L EL T C +++ +A ++++G
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC-----DSDSSPMALFLKMIG 229
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 20/154 (12%)
Query: 153 NLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKV 212
+L + +K + L + F+ + + + + + N IH DL+ N+L+ S K+
Sbjct: 262 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS--ASLVCKI 319
Query: 213 IDFGSSCYSHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLF 268
DFG + ++F + +PE I + D+WS G +L E+ T G +
Sbjct: 320 ADFG---------LARVGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 370
Query: 269 PGENEVEQLACIMEILGCP-----PDEVINTASR 297
PG + E + + P P+E+ N R
Sbjct: 371 PGMSNPEVIRALERGYRMPRPENCPEELYNIMMR 404
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 17/188 (9%)
Query: 110 LIEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNL-NLYELIKRNNYQGFSL 168
L E +++ LR + Y V+ + I E M+ +L + +K + L
Sbjct: 61 LQEAQVMKKLRHEKLVQLYAVVS-------EEPIYIVIEYMSKGSLLDFLKGEMGKYLRL 113
Query: 169 GLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY 228
+ A + + + R N +H DL+ N+L+ + + KV DFG + T
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEXTA 171
Query: 229 IQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIME- 282
Q ++F + +PE L + D+WS G +L EL T G +PG E L +
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 283 -ILGCPPD 289
+ CPP+
Sbjct: 232 YRMPCPPE 239
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG--SSCYSHQRVYTYIQ 230
++A + + + L +H DL NVL++ +K+ DFG + + + T
Sbjct: 130 KYAVQICKGMDYLGSRQYVHRDLAARNVLVESE--HQVKIGDFGLTKAIETDKEXXTVKD 187
Query: 231 SR----FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILG 285
R F+ +PE ++ + D+WS G L EL T C +++ +A ++++G
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC-----DSDSSPMALFLKMIG 241
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF 233
F++ + + + L +N IH DL N+LL K+ DFG + + ++
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 234 -----YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE I Y D+WS G L EL++ G +PG
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 273
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 143 LCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL 202
+C+ E M R F+ + + + + L +IH DL N L+
Sbjct: 78 ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV 137
Query: 203 KQRGSSSIKVIDFGSSCYSHQRVYTY-IQSRF---YRSPEVILGLPYGPPIDMWSLGCIL 258
+ + IKV DFG + + YT ++F + SPEV Y D+WS G ++
Sbjct: 138 GE--NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 195
Query: 259 AELYT 263
E+++
Sbjct: 196 WEVFS 200
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH +L+ N+L+
Sbjct: 81 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSD 140
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + YT + ++F + +PE I + D+WS G +L E
Sbjct: 141 --TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 198
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 199 IVTHGRIPYPG 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 157 LIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDF 215
L + +QG F LG + R+A + + + L + IH DL N+LL R +K+ DF
Sbjct: 108 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDF 165
Query: 216 G-----SSCYSHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
G H + + + F + +PE + + D W G L E++T
Sbjct: 166 GLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 167 SLGLIRRFAFSLVQC--LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSC 219
S+GL + F+ C + LH ++ IH DL NVLL +K+ DFG
Sbjct: 130 SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN--DRLVKIGDFGLAKAVPEG 187
Query: 220 YSHQRVYTYIQSR-FYRSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
+ RV S F+ +PE + + D+WS G L EL T C
Sbjct: 188 HEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 157 LIKRNNYQG-FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDF 215
L + +QG F LG + R+A + + + L + IH DL N+LL R +K+ DF
Sbjct: 98 LDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDF 155
Query: 216 G-----SSCYSHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
G H + + + F + +PE + + D W G L E++T
Sbjct: 156 GLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC 219
R++ +G + + + + + L IH DL N L+ + +KV DFG +
Sbjct: 95 RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDR--DLCVKVSDFGMTR 152
Query: 220 YSHQRVY-TYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
Y Y + + ++F + +PEV Y D+W+ G ++ E+++
Sbjct: 153 YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
FA+ + + + L ++ +H DL NVL+ +K+ DFG + S +
Sbjct: 177 FAYQVAKGMEFLEFKSCVHRDLAARNVLVTH--GKVVKICDFGLARDIMSDSNYVVRGNA 234
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE + Y D+WS G +L E+++ G +PG
Sbjct: 235 RLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF 233
F+ + Q + L +N IH D+ NVLL + I + +R
Sbjct: 165 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 234 ---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE I Y D+WS G +L E+++ G +PG
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 149 LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSS 208
+ N +L + +K + ++ + A + + + + N IH DL+ N+L+ +
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TL 146
Query: 209 SIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT- 263
S K+ DFG + T + ++F + +PE I + D+WS G +L E+ T
Sbjct: 147 SCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 206
Query: 264 GCPLFPG 270
G +PG
Sbjct: 207 GRIPYPG 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH DL+ N+L+
Sbjct: 86 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 145
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + T + ++F + +PE I + D+WS G +L E
Sbjct: 146 --TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 203
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 204 IVTHGRIPYPG 214
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 187 REN-IIHCDLKPENVL--LKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRFYRSPEV-- 239
REN I+H ++KP N++ + + G S K+ DFG++ ++ + + Y P++
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE 188
Query: 240 --IL----GLPYGPPIDMWSLGCILAELYTGC-PLFPGENEVEQLACIMEILGCPPDEVI 292
+L YG +D+WS+G TG P P E + +I+ P I
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248
Query: 293 NTASR 297
+ +
Sbjct: 249 SGVQK 253
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ--RVYTYIQSR 232
A+ + + + L + IH DL NVL+ + + +K+ DFG + H R
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDXXKKTTNGR 213
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G +L E++T G +PG
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH DL+ N+L+
Sbjct: 87 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 146
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + T + ++F + +PE I + D+WS G +L E
Sbjct: 147 --TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 204
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 205 IVTHGRIPYPG 215
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
F++ + + + L +N IH DL N+LL K+ DFG + + +
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G L EL++ G +PG
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 266
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF 233
F+ + Q + L +N IH D+ NVLL + I + +R
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 234 ---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE I Y D+WS G +L E+++ G +PG
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF 233
F+ + Q + L +N IH D+ NVLL + I + +R
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 234 ---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE I Y D+WS G +L E+++ G +PG
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH DL+ N+L+
Sbjct: 93 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 152
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + T + ++F + +PE I + D+WS G +L E
Sbjct: 153 --TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 210
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 211 IVTHGRIPYPG 221
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
F++ + + + L +N IH DL N+LL K+ DFG + + +
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G L EL++ G +PG
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 250
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH DL+ N+L+
Sbjct: 91 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 150
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + T + ++F + +PE I + D+WS G +L E
Sbjct: 151 --TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 209 IVTHGRIPYPG 219
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH DL+ N+L+
Sbjct: 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 144
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + T + ++F + +PE I + D+WS G +L E
Sbjct: 145 --TLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 203 IVTHGRIPYPG 213
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
F++ + + + L +N IH DL N+LL K+ DFG + + +
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G L EL++ G +PG
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 268
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 145 ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ 204
I+ + N +L + +K + ++ + A + + + + N IH DL+ N+L+
Sbjct: 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 144
Query: 205 RGSSSIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAE 260
+ S K+ DFG + T + ++F + +PE I + D+WS G +L E
Sbjct: 145 --TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 261 LYT-GCPLFPG 270
+ T G +PG
Sbjct: 203 IVTHGRIPYPG 213
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
F++ + + + L +N IH DL N+LL K+ DFG + + +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
R + +PE I Y D+WS G L EL++ G +PG
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 273
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF 233
F+ + Q + L +N IH D+ NVLL + I + +R
Sbjct: 157 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 234 ---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE I Y D+WS G +L E+++ G +PG
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 167 SLGLIRRFAFSLVQC--LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQR 224
S+GL + F+ C + LH ++ IH +L NVLL +K+ DFG + +
Sbjct: 113 SIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDN--DRLVKIGDFGLA-KAVPE 169
Query: 225 VYTYIQSR-------FYRSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
+ Y + R F+ +PE + + D+WS G L EL T C
Sbjct: 170 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 217
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 149 LMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSS 208
+ N +L + +K + ++ + A + + + + N IH DL+ N+L+ +
Sbjct: 98 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TL 155
Query: 209 SIKVIDFGSSCYSHQRVYTYIQ-SRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT- 263
S K+ DFG + T + ++F + +PE I + D+WS G +L E+ T
Sbjct: 156 SCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 215
Query: 264 GCPLFPG 270
G +PG
Sbjct: 216 GRIPYPG 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 167 SLGLIRRFAFSLVQC--LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQR 224
S+GL + F+ C + LH ++ IH +L NVLL +K+ DFG + +
Sbjct: 113 SIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDN--DRLVKIGDFGLA-KAVPE 169
Query: 225 VYTYIQSR-------FYRSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
+ Y + R F+ +PE + + D+WS G L EL T C
Sbjct: 170 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 217
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ +++
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ +++
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY--TYIQSR 232
+ L + + L + IH DL NVL+ + ++ +K+ DFG + + Y R
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKNTTNGR 220
Query: 233 F---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF 233
F+ + Q + L +N IH D+ NVLL + I + +R
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 234 ---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE I Y D+WS G +L E+++ G +PG
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ +++
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ +++
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ +++
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 13/133 (9%)
Query: 178 LVQCLRLLHRENIIHCDLKPENVL--LKQRGSSSIKVIDFGSS--CYSHQRVYTYIQSRF 233
+V + L I+H ++KP N++ + + G S K+ DFG++ ++ +
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEE 180
Query: 234 YRSPEV----IL----GLPYGPPIDMWSLGCILAELYTGC-PLFPGENEVEQLACIMEIL 284
Y P++ +L YG +D+WS+G TG P P E + +I+
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240
Query: 285 GCPPDEVINTASR 297
P I+ +
Sbjct: 241 TGKPSGAISGVQK 253
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF 233
F+ + Q + L +N IH D+ NVLL + I + +R
Sbjct: 163 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 222
Query: 234 ---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE I Y D+WS G +L E+++ G +PG
Sbjct: 223 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ +++
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 213 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ +++
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 210 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 251
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
LG + A + + L + +H DL N L+ Q +K+ DFG S +
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ--GLVVKIGDFGMSRDIYSTD 212
Query: 226 YTYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLAC 279
Y + R + PE IL + D+WS G +L E++T G + + E + C
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 272
Query: 280 IME------ILGCPPD 289
I + CPP+
Sbjct: 273 ITQGRELERPRACPPE 288
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ +++
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 208 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 249
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
LG + A + + L + +H DL N L+ Q +K+ DFG S +
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ--GLVVKIGDFGMSRDIYSTD 189
Query: 226 YTYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLAC 279
Y + R + PE IL + D+WS G +L E++T G + + E + C
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 249
Query: 280 IME------ILGCPPD 289
I + CPP+
Sbjct: 250 ITQGRELERPRACPPE 265
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRV 225
LG + A + + L + +H DL N L+ Q +K+ DFG S +
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ--GLVVKIGDFGMSRDIYSTD 183
Query: 226 YTYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLAC 279
Y + R + PE IL + D+WS G +L E++T G + + E + C
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC 243
Query: 280 IME------ILGCPPD 289
I + CPP+
Sbjct: 244 ITQGRELERPRACPPE 259
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ ++
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT--GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G P +PG
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG 262
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 30/175 (17%)
Query: 123 DADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCL 182
+A+S V+ M E +L + + + N+ EL+ + S+G+
Sbjct: 440 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ-----VSMGM------------ 482
Query: 183 RLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFYR 235
+ L N +H DL NVLL + + K+ DFG S Y + + ++Y
Sbjct: 483 KYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY- 539
Query: 236 SPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIM--EILGCP 287
+PE I + D+WS G ++ E ++ G + G E A + E +GCP
Sbjct: 540 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 594
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ ++
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT--GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G P +PG
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG 262
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 30/175 (17%)
Query: 123 DADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCL 182
+A+S V+ M E +L + + + N+ EL+ + S+G+
Sbjct: 441 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ-----VSMGM------------ 483
Query: 183 RLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFYR 235
+ L N +H DL NVLL + + K+ DFG S Y + + ++Y
Sbjct: 484 KYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY- 540
Query: 236 SPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG--ENEVEQLACIMEILGCP 287
+PE I + D+WS G ++ E ++ G + G +EV + E +GCP
Sbjct: 541 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 595
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFY 234
++ L N +H DL NVLL + + K+ DFG S Y + + ++Y
Sbjct: 120 MKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIM--EILGCP 287
+PE I + D+WS G ++ E ++ G + G E A + E +GCP
Sbjct: 178 -APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 232
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 17/104 (16%)
Query: 132 HMLEYFY----FRNHLCISFELMN----LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLR 183
HM FY F+N + EL + LN L K + GL+ FA ++ +
Sbjct: 127 HMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIE 186
Query: 184 LLHRENIIHCDLKPENVLL---------KQRGSSSIKVIDFGSS 218
+H IIH D+KP+N +L + S+ + +ID G S
Sbjct: 187 QVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQS 230
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +K+ DFG ++ +++
Sbjct: 209 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT--GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G P +PG
Sbjct: 267 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP-YPG 308
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFY 234
++ L N +H DL NVLL + + K+ DFG S Y + + ++Y
Sbjct: 118 MKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIM--EILGCP 287
+PE I + D+WS G ++ E ++ G + G E A + E +GCP
Sbjct: 176 -APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 230
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 21/117 (17%)
Query: 186 HRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ-----RVYTYIQSRFYRSPEVI 240
H+ +I H D K +NVLLK ++ + DFG + + + +R Y +PEV+
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLA--DFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
Query: 241 LGL-----PYGPPIDMWSLGCILAELYTGCP---------LFPGENEVEQLACIMEI 283
G IDM+++G +L EL + C + P E E+ Q + E+
Sbjct: 198 EGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEEL 254
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFY 234
++ L N +H DL NVLL + + K+ DFG S Y + + ++Y
Sbjct: 124 MKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIM--EILGCP 287
+PE I + D+WS G ++ E ++ G + G E A + E +GCP
Sbjct: 182 -APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFY 234
++ L N +H DL NVLL + + K+ DFG S Y + + ++Y
Sbjct: 130 MKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIM--EILGCP 287
+PE I + D+WS G ++ E ++ G + G E A + E +GCP
Sbjct: 188 -APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 242
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFY 234
++ L N +H DL NVLL + + K+ DFG S Y + + ++Y
Sbjct: 140 MKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIM--EILGCP 287
+PE I + D+WS G ++ E ++ G + G E A + E +GCP
Sbjct: 198 -APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFY 234
++ L N +H DL NVLL + + K+ DFG S Y + + ++Y
Sbjct: 140 MKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIM--EILGCP 287
+PE I + D+WS G ++ E ++ G + G E A + E +GCP
Sbjct: 198 -APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFY 234
++ L N +H DL NVLL + + K+ DFG S Y + + ++Y
Sbjct: 138 MKYLEESNFVHRDLAARNVLLVTQHYA--KISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIM--EILGCP 287
+PE I + D+WS G ++ E ++ G + G E A + E +GCP
Sbjct: 196 -APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 250
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 175 AFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-----SSCYSHQRVYTYI 229
+ L + + L + IH DL NVL+ + ++ +++ DFG ++ +++
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 230 QSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG 270
+ +PE + Y D+WS G ++ E++T G +PG
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 13/149 (8%)
Query: 122 KDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQC 181
+++D NVI R I+ EL L E +++ ++ L I
Sbjct: 72 RESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ-QTTSG 130
Query: 182 LRLLHRENIIHCDLKPENVLLKQ---RGSSSIKVIDFG------SSCYSHQRVYTYIQSR 232
L LH NI+H DLKP N+L+ G + DFG +S R +
Sbjct: 131 LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 233 FYRSPEVILGLPYGPP---IDMWSLGCIL 258
+ +PE++ P +D++S GC+
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVF 219
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + + ++
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 141 NHLCISFELMNLNLYELIKRNNYQGFSLGL--IRRFAFSLVQCLRLLHRENIIHCDLKPE 198
N + I EL L EL + FSL L + +A+ L L L + +H D+
Sbjct: 463 NPVWIIMELCTLG--ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 520
Query: 199 NVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWS 253
NVL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 521 NVLVS--ATDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWM 577
Query: 254 LG-CILAELYTGCPLFPGENEVEQLACIM--EILGCPPD 289
G C+ L G F G + + I E L PP+
Sbjct: 578 FGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
NV+H+ + I E M + R + F++ + + +R L
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVILG 242
+H DL N+L+ + KV DFG S + VYT + + +PE I
Sbjct: 165 GYVHRDLAARNILVNS--NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 243 LPYGPPIDMWSLGCILAELYT 263
+ D+WS G ++ E+ +
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
L + FA + + + LH ++ IH L NVLL +K+ DFG + + +
Sbjct: 109 GLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDN--DRLVKIGDFGLA-KAVPEGH 165
Query: 227 TYIQSR-------FYRSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
Y + R F+ +PE + + D+WS G L EL T C
Sbjct: 166 EYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYC 211
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH +L N+L++ + +K+ DFG + + Y ++
Sbjct: 119 QYTSQICKGMEYLGTKRYIHRNLATRNILVE--NENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
L + FA + + + LH ++ IH L NVLL +K+ DFG + + +
Sbjct: 110 GLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDN--DRLVKIGDFGLA-KAVPEGH 166
Query: 227 TYIQSR-------FYRSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
Y + R F+ +PE + + D+WS G L EL T C
Sbjct: 167 EYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYC 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 123 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 180
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 181 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 192 HCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTY----IQSRFYRSPEVILGLPYGP 247
H D+KPEN+L+ ++DFG + + T + + +Y +PE
Sbjct: 157 HRDVKPENILVS--ADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 248 PIDMWSLGCILAELYTGCPLFPGEN 272
D+++L C+L E TG P + G+
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 124 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 181
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 182 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 125 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 182
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 183 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 149 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 206
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 207 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 141 NHLCISFELMNLNLYELIKRNNYQGFSLGL--IRRFAFSLVQCLRLLHRENIIHCDLKPE 198
N + I EL L EL + FSL L + +A+ L L L + +H D+
Sbjct: 463 NPVWIIMELCTLG--ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 520
Query: 199 NVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWS 253
NVL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 521 NVLVS--SNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWM 577
Query: 254 LG-CILAELYTGCPLFPGENEVEQLACIM--EILGCPPD 289
G C+ L G F G + + I E L PP+
Sbjct: 578 FGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQSR 232
++ + + + L +H DL N+L++ + +K+ DFG + + Y ++
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESE--AHVKIADFGLAKLLPLDKDYYVVREP 189
Query: 233 -----FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCP 287
F+ +PE + + D+WS G +L EL+T C + A + ++GC
Sbjct: 190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC-----DKSCSPSAEFLRMMGCE 244
Query: 288 PD 289
D
Sbjct: 245 RD 246
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 101 NKKRFHHQALIEVRI---------LDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMN 151
N K H Q L E +I + ++R + YNV+ M + L S E
Sbjct: 41 NVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM-------DLLGPSLE--- 90
Query: 152 LNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLK-QRGSSSI 210
+L+ R SL + A ++ + +H ++ +H D+KP+N L+ R ++ +
Sbjct: 91 -DLFNFCSRK----LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 145
Query: 211 KVIDFG-SSCYSHQRVYTYIQSR---------FYRSPEVILGLPYGPPIDMWSLGCILAE 260
+IDFG + Y + +I R Y S LG+ D+ SLG +L
Sbjct: 146 YIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMY 205
Query: 261 LYTGC 265
G
Sbjct: 206 FLRGS 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 122 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 179
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 180 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQSR 232
++ + + + L +H DL N+L++ + +K+ DFG + + Y ++
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILVESE--AHVKIADFGLAKLLPLDKDYYVVREP 177
Query: 233 -----FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCP 287
F+ +PE + + D+WS G +L EL+T C + A + ++GC
Sbjct: 178 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC-----DKSCSPSAEFLRMMGCE 232
Query: 288 PD 289
D
Sbjct: 233 RD 234
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 117 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 175 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 116 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 173
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 174 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVEN--ENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 194 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQS 231
++ + + + L + IH DL N+L++ + +K+ DFG + + ++
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVE--NENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 232 R-----FYRSPEVILGLPYGPPIDMWSLGCILAELYT 263
F+ +PE + + D+WS G +L EL+T
Sbjct: 194 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 13/138 (9%)
Query: 141 NHLCISFELMNLNLYELIKRNNYQGFSLGL--IRRFAFSLVQCLRLLHRENIIHCDLKPE 198
N + I EL L EL + FSL L + +A+ L L L + +H D+
Sbjct: 83 NPVWIIMELCTLG--ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 140
Query: 199 NVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWS 253
NVL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 141 NVLVS--ATDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWM 197
Query: 254 LG-CILAELYTGCPLFPG 270
G C+ L G F G
Sbjct: 198 FGVCMWEILMHGVKPFQG 215
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ---RGSSSIKVIDFGSSCYSH 222
FS+ + A ++ ++ +H +++++ D+KP+N L+ + + ++ I V+DFG
Sbjct: 102 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG------ 155
Query: 223 QRVYTYIQSRFYRSPEVILGLPY 245
+FYR P +PY
Sbjct: 156 -------MVKFYRDPVTKQHIPY 171
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQ---RGSSSIKVIDFGSSCYSH 222
FS+ + A ++ ++ +H +++++ D+KP+N L+ + + ++ I V+DFG
Sbjct: 103 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG------ 156
Query: 223 QRVYTYIQSRFYRSPEVILGLPY 245
+FYR P +PY
Sbjct: 157 -------MVKFYRDPVTKQHIPY 172
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYS--HQRV--YTYIQSRFYRSPE 238
L ++ +H DL N L+ + + +K+ DFG S YS + RV +T + R + PE
Sbjct: 144 LASQHFVHRDLATRNCLVGE--NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR-WMPPE 200
Query: 239 VILGLPYGPPIDMWSLGCILAELYT 263
I+ + D+WSLG +L E++T
Sbjct: 201 SIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 12/125 (9%)
Query: 166 FSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYS-- 221
L + A + + L ++ +H DL N L+ + +K+ DFG S YS
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG--ANLLVKIGDFGMSRDVYSTD 187
Query: 222 HQRV--YTYIQSRFYRSPEVILGLPYGPPIDMWSLGCILAELYT--GCPLFPGENEVEQL 277
+ RV +T + R + PE I+ + D+WS G IL E++T P F N E +
Sbjct: 188 YYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-TEVI 245
Query: 278 ACIME 282
CI +
Sbjct: 246 ECITQ 250
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY-TYIQSRF---YRSP 237
++ L N +H DL NVLL + + I + + + Y ++ + +P
Sbjct: 124 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAP 183
Query: 238 EVILGLPYGPPIDMWSLGCILAELYT-GCPLFPGENEVEQLACIM--EILGCP 287
E I + D+WS G ++ E ++ G + G E A + E +GCP
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG-SSCYSHQRVYTYIQSR 232
++ + + + L +H DL N+L++ + +K+ DFG + + Y ++
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESE--AHVKIADFGLAKLLPLDKDYYVVREP 176
Query: 233 -----FYRSPEVILGLPYGPPIDMWSLGCILAELYTGC 265
F+ +PE + + D+WS G +L EL+T C
Sbjct: 177 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC 214
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 158 IKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG 216
I N + FS + + + ++ L +H +H D+K N+LL + + ++D+G
Sbjct: 141 IYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYG 199
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 158 IKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG 216
I N + FS + + + ++ L +H +H D+K N+LL + + ++D+G
Sbjct: 141 IYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYG 199
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 158 IKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFG 216
I N + FS + + + ++ L +H +H D+K N+LL + + ++D+G
Sbjct: 141 IYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYG 199
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
NVIH+ + I E M N +L +++N+ Q F++ + + ++ L
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLAD 153
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRVYTY-----IQSRFYRSPE 238
N +H DL N+L+ + KV DFG S + + YT I R + +PE
Sbjct: 154 MNYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR-WTAPE 210
Query: 239 VILGLPYGPPIDMWSLGCILAELYT 263
I + D+WS G ++ E+ +
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 176 FSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-- 233
+ + L +H + H DLKP N+LL G + +D GS + V Q+
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVL--MDLGSMNQACIHVEGSRQALTLQ 198
Query: 234 ----------YRSPEVILGLPY---GPPIDMWSLGCILAELYTG 264
YR+PE+ + D+WSLGC+L + G
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 11/137 (8%)
Query: 141 NHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPEN 199
N + I EL L L ++ Y L + +A+ L L L + +H D+ N
Sbjct: 85 NPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 143
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWSL 254
VL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 144 VLVS--SNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMF 200
Query: 255 G-CILAELYTGCPLFPG 270
G C+ L G F G
Sbjct: 201 GVCMWEILMHGVKPFQG 217
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 11/137 (8%)
Query: 141 NHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPEN 199
N + I EL L L ++ Y L + +A+ L L L + +H D+ N
Sbjct: 80 NPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 138
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWSL 254
VL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 139 VLVS--SNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMF 195
Query: 255 G-CILAELYTGCPLFPG 270
G C+ L G F G
Sbjct: 196 GVCMWEILMHGVKPFQG 212
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 11/137 (8%)
Query: 141 NHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPEN 199
N + I EL L L ++ Y L + +A+ L L L + +H D+ N
Sbjct: 88 NPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 146
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWSL 254
VL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 147 VLVS--SNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMF 203
Query: 255 G-CILAELYTGCPLFPG 270
G C+ L G F G
Sbjct: 204 GVCMWEILMHGVKPFQG 220
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 11/137 (8%)
Query: 141 NHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPEN 199
N + I EL L L ++ Y L + +A+ L L L + +H D+ N
Sbjct: 86 NPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 144
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWSL 254
VL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 145 VLVS--SNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMF 201
Query: 255 G-CILAELYTGCPLFPG 270
G C+ L G F G
Sbjct: 202 GVCMWEILMHGVKPFQG 218
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 134 LEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHC 193
L F R++ + E + ++L ++ +N F + + ++ L +H +H
Sbjct: 118 LTEFKGRSYRFMVMERLGIDLQKISGQNGT--FKKSTVLQLGIRMLDVLEYIHENEYVHG 175
Query: 194 DLKPENVLLKQRGSSSIKVIDFGSS 218
D+K N+LL + + + D+G S
Sbjct: 176 DIKAANLLLGYKNPDQVYLADYGLS 200
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 11/137 (8%)
Query: 141 NHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPEN 199
N + I EL L L ++ Y L + +A+ L L L + +H D+ N
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 141
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWSL 254
VL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 142 VLVS--SNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 255 G-CILAELYTGCPLFPG 270
G C+ L G F G
Sbjct: 199 GVCMWEILMHGVKPFQG 215
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 11/137 (8%)
Query: 141 NHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPEN 199
N + I EL L L ++ Y L + +A+ L L L + +H D+ N
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 141
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWSL 254
VL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 142 VLVS--SNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 255 G-CILAELYTGCPLFPG 270
G C+ L G F G
Sbjct: 199 GVCMWEILMHGVKPFQG 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 11/137 (8%)
Query: 141 NHLCISFELMNLN-LYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPEN 199
N + I EL L L ++ Y L + +A+ L L L + +H D+ N
Sbjct: 111 NPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARN 169
Query: 200 VLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDMWSL 254
VL+ + +K+ DFG S Y Y Y S+ + +PE I + D+W
Sbjct: 170 VLVS--SNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMF 226
Query: 255 G-CILAELYTGCPLFPG 270
G C+ L G F G
Sbjct: 227 GVCMWEILMHGVKPFQG 243
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+IH+ + I E M N +L +K+N+ Q F++ + + ++ L
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAGMKYLSD 142
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + +PE I
Sbjct: 143 MGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G ++ E+ +
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVS 222
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 12/102 (11%)
Query: 168 LGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQR 224
+G++R A + + L N +H DL N+L+ + KV DFG S +
Sbjct: 150 VGMLRGIAAGM----KYLANMNYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEA 203
Query: 225 VYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
YT + + +PE I + D+WS G ++ E+ T
Sbjct: 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF 233
FA + + + L ++ IH DL N+L+ + + K+ DFG S Q V Y++
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLS--RGQEV--YVKKTM 200
Query: 234 YRSPEVILGLP------YGPPIDMWSLGCILAELYT--GCP 266
R P + + Y D+WS G +L E+ + G P
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY-----SHQRVYTY 228
++ + + + L +H DL N+L++ + +K+ DFG + V
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVE--SEAHVKIADFGLAKLLPLDKDXXVVREP 173
Query: 229 IQSR-FYRSPEVILGLPYGPPIDMWSLGCILAELYTGCPLFPGENEVEQLACIMEILGCP 287
QS F+ +PE + + D+WS G +L EL+T C + A + ++GC
Sbjct: 174 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC-----DKSCSPSAEFLRMMGCE 228
Query: 288 PD 289
D
Sbjct: 229 RD 230
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF 233
FA + + + L ++ IH DL N+L+ + + K+ DFG S Q V Y++
Sbjct: 137 FAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLS--RGQEV--YVKKTM 190
Query: 234 YRSPEVILGLP------YGPPIDMWSLGCILAELYT--GCP 266
R P + + Y D+WS G +L E+ + G P
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ 223
SL++ L L ++ H D++P NV++ R + ++IDFGS + Q
Sbjct: 347 SLLRSLAALEKQGFWHDDVRPWNVMVDARQHA--RLIDFGSIVTTPQ 391
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ 223
SL++ L L ++ H D++P NV++ R + ++IDFGS + Q
Sbjct: 347 SLLRSLAALEKQGFWHDDVRPWNVMVDARQHA--RLIDFGSIVTTPQ 391
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFY 234
++ L +N +H DL NVLL R + K+ DFG S Y R ++Y
Sbjct: 123 MKYLEEKNFVHRDLAARNVLLVNRHYA--KISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAE-LYTGCPLFPGENEVEQLACIME--ILGCPPD 289
+PE I + D+WS G + E L G + E +A I + + CPP+
Sbjct: 181 -APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 237
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 172 RRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS------HQRV 225
R+ A +V+ + LH + I+H DLK +NV + + + DFG S +
Sbjct: 133 RQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRRED 189
Query: 226 YTYIQSRF--YRSPEVIL---------GLPYGPPIDMWSLGCILAELYTGCPLF---PGE 271
IQ+ + + +PE+I LP+ D+++LG I EL+ F P E
Sbjct: 190 KLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE 249
Query: 272 NEVEQLACIME 282
+ Q+ M+
Sbjct: 250 AIIWQMGTGMK 260
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS---HQRVYTYIQSRFYRSPE 238
+ L +++H DL NVL+ + + I + Y+ ++ + + + +PE
Sbjct: 141 MEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE 200
Query: 239 VILGLPYGPPIDMWSLGCILAELYT-GCPLFPG--ENEVEQLACIMEILGCPPD 289
I+ + D+WS G +L E+++ G + G +V ++ ++L CP D
Sbjct: 201 AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDD 254
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYS---HQRVYTYIQSRFYRSPE 238
+ L +++H DL NVL+ + + I + Y+ ++ + + + +PE
Sbjct: 158 MEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE 217
Query: 239 VILGLPYGPPIDMWSLGCILAELYT-GCPLFPG--ENEVEQLACIMEILGCPPD 289
I+ + D+WS G +L E+++ G + G +V ++ ++L CP D
Sbjct: 218 AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDD 271
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 177 SLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQ 223
SL++ L L ++ H D++P NV++ R + ++IDFGS + Q
Sbjct: 347 SLLRSLAALEKKGFWHDDVRPWNVMVDARQHA--RLIDFGSIVTTPQ 391
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 165
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + SPE I
Sbjct: 166 MGAVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 22/134 (16%)
Query: 151 NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE--------NIIHCDLKPENVLL 202
N +LY+ +K S+ + A+S V L LH E I H DLK +N+L+
Sbjct: 119 NGSLYDYLKSTTLDAKSM---LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175
Query: 203 KQRGSSSIKVIDFGSSCYSHQRVY-----TYIQSRFYRSPEVI---LGLPYGPP---IDM 251
K+ G+ I + S T + ++ Y PEV+ L + DM
Sbjct: 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADM 235
Query: 252 WSLGCILAELYTGC 265
+S G IL E+ C
Sbjct: 236 YSFGLILWEVARRC 249
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 140 RNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSL--VQCLRLLHRENIIHCDLK 196
RN + + ++ M N NL + ++ S+ +R + + L LH IIH D+K
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVK 166
Query: 197 PENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDM 251
N+LL + K+ DFG S + T++ Y PE + D+
Sbjct: 167 SINILLDENFVP--KITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDV 224
Query: 252 WSLGCILAEL 261
+S G +L E+
Sbjct: 225 YSFGVVLFEV 234
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 140 RNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSL--VQCLRLLHRENIIHCDLK 196
RN + + ++ M N NL + ++ S+ +R + + L LH IIH D+K
Sbjct: 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVK 166
Query: 197 PENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSRF-----YRSPEVILGLPYGPPIDM 251
N+LL + K+ DFG S + T++ Y PE + D+
Sbjct: 167 SINILLDENFVP--KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDV 224
Query: 252 WSLGCILAEL 261
+S G +L E+
Sbjct: 225 YSFGVVLFEV 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 165
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + SPE I
Sbjct: 166 MGFVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 160 RNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSC 219
R + L+ + + + + L ++H +L NVLLK S ++V DFG +
Sbjct: 124 RQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS--PSQVQVADFGVAD 181
Query: 220 Y----SHQRVYTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
Q +Y+ ++ + + E I Y D+WS G + EL T
Sbjct: 182 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 143 LCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLL 202
+ ++ + N +L +++++ Q F++ + + ++ L +H DL N+L+
Sbjct: 122 MIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI 180
Query: 203 KQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGC 256
+ KV DFG S + YT + + SPE I + D+WS G
Sbjct: 181 NS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGI 238
Query: 257 ILAELYT 263
+L E+ +
Sbjct: 239 VLWEVMS 245
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N+IH+ + I E M + R N F++ + + ++ L
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 150
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVILG 242
+ +H DL N+L+ + KV DFG S + YT + + +PE I
Sbjct: 151 SAVHRDLAARNILVNS--NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 243 LPYGPPIDMWSLGCILAELYT 263
+ D+WS G ++ E+ +
Sbjct: 209 RKFTSASDVWSYGIVMWEVMS 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 170 LIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY----SHQRV 225
L+ + + + + L ++H +L NVLLK S ++V DFG + Q +
Sbjct: 116 LLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKS--PSQVQVADFGVADLLPPDDKQLL 173
Query: 226 YTYIQSRF-YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
Y+ ++ + + E I Y D+WS G + EL T
Sbjct: 174 YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 136
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + SPE I
Sbjct: 137 MGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMS 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 63/165 (38%), Gaps = 8/165 (4%)
Query: 111 IEVRILDHLRKKDADSSYNVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGL 170
++ + L R S N++ ++ + + I EL+ + R +
Sbjct: 155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKT 214
Query: 171 IRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQ 230
+ + + L + IH DL N L+ ++ + +K+ DFG S VY
Sbjct: 215 LLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK--NVLKISDFGMSREEADGVYAASG 272
Query: 231 SRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFP 269
+ +PE + Y D+WS G +L E ++ G +P
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP 317
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 165
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + SPE I
Sbjct: 166 MGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 165
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + SPE I
Sbjct: 166 MGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 165
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + SPE I
Sbjct: 166 MGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 165
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + SPE I
Sbjct: 166 MGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2W1Z|A Chain A, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity.
pdb|2W1Z|B Chain B, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity
Length = 368
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 23/117 (19%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIK----VIDFGSSCYSHQRVYTY 228
+ L++ L ++H D + N+LL QRG + ++ G+S S
Sbjct: 195 QLTLQLIRLAASLQHYGLVHADFQVRNILLDQRGGVFLTGFEHLVRDGASAVSP------ 248
Query: 229 IQSRFYRSPEVILG--LPYGP--------PIDMWSLGCILAELYTGCPLFPGENEVE 275
R + PE LPY P D W+LG LA + C P + E
Sbjct: 249 -IGRGFAPPETTAERMLPYRQHHPTLMTFPFDTWTLG--LAIYWIWCADLPNTEDAE 302
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 163
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + SPE I
Sbjct: 164 MGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 221
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMS 243
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 153
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG S + YT + + SPE I
Sbjct: 154 MGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 168 LGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQR 224
+G++R A ++ L +H DL N+L+ + KV DFG S +
Sbjct: 121 VGMLRGIA----SGMKYLSDMGYVHRDLAARNILINS--NLVCKVSDFGLSRVLEDDPEA 174
Query: 225 VYTYIQSRF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
YT + + SPE I + D+WS G +L E+ +
Sbjct: 175 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 66/173 (38%), Gaps = 17/173 (9%)
Query: 129 NVIHMLEYFYFRNHLC-ISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I LE R L I E M + R + F++ + + +R L
Sbjct: 111 NIIR-LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL NVL+ + KV DFG S YT + + +PE I
Sbjct: 170 LGYVHRDLAARNVLVDS--NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 242 GLPYGPPIDMWSLGCILAEL--YTGCPLFPGEN-----EVEQLACIMEILGCP 287
+ D+WS G ++ E+ Y P + N VE+ + +GCP
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCP 280
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N+IH+ + I E M + R N F++ + + ++ L
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVILG 242
+ +H DL N+L+ + KV DFG S + YT + + +PE I
Sbjct: 136 SYVHRDLAARNILVNS--NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 243 LPYGPPIDMWSLGCILAELYT 263
+ D+WS G ++ E+ +
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 8/141 (5%)
Query: 129 NVIHMLEYFYFRNHLCISFELMNLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHRE 188
N+IH+ + I E M + R N F++ + + ++ L
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 189 NIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVILG 242
+ +H DL N+L+ + KV DFG S + YT + + +PE I
Sbjct: 130 SYVHRDLAARNILVNS--NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 243 LPYGPPIDMWSLGCILAELYT 263
+ D+WS G ++ E+ +
Sbjct: 188 RKFTSASDVWSYGIVMWEVMS 208
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 173 RFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR 232
+ A + + L+ + +H DL N ++ ++K+ DFG + ++ Y +
Sbjct: 134 QMAAEIADGMAYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDIYETAYYRKGGK 191
Query: 233 F-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ +PE + + DMWS G +L E+ +
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 11/137 (8%)
Query: 141 NHLCISFELMNLNLYELIKRNNYQGFSLGL--IRRFAFSLVQCLRLLHRENIIHCDLKPE 198
N + I EL L EL + FSL L + +A+ L L L + +H D+
Sbjct: 83 NPVWIIMELCTLG--ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR 140
Query: 199 NVLLKQRGSSSIKVIDFGSSCYSHQRVYTYIQSR----FYRSPEVILGLPYGPPIDMWSL 254
NVL+ + +K+ DFG S Y + +PE I + D+W
Sbjct: 141 NVLVS--SNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 255 G-CILAELYTGCPLFPG 270
G C+ L G F G
Sbjct: 199 GVCMWEILMHGVKPFQG 215
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG--ENEVEQLACIMEILG 285
+ + + E IL Y D+WS G + EL T G + G +E+ + E L
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 241
Query: 286 CPPDEVINT--ASRRRLFFDSKGTPR 309
PP I+ R+ D+ P+
Sbjct: 242 QPPICTIDVYMIMRKCWMIDADSRPK 267
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 129 NVIHMLEYFYFRNHLCISFELM-NLNLYELIKRNNYQGFSLGLIRRFAFSLVQCLRLLHR 187
N+I + + I E M N +L +++++ Q F++ + + ++ L
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLRGIASGMKYLSD 165
Query: 188 ENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCY---SHQRVYTYIQSRF---YRSPEVIL 241
+H DL N+L+ + KV DFG + + YT + + SPE I
Sbjct: 166 MGYVHRDLAARNILINS--NLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 242 GLPYGPPIDMWSLGCILAELYT 263
+ D+WS G +L E+ +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS 245
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG--ENEVEQLACIMEILG 285
+ + + E IL Y D+WS G + EL T G + G +E+ + E L
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 241
Query: 286 CPPDEVINT--ASRRRLFFDSKGTPR 309
PP I+ R+ D+ P+
Sbjct: 242 QPPICTIDVYMIMRKCWMIDADSRPK 267
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
SL + + A + + L+ +H DL N ++ + ++K+ DFG + ++ Y
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDY 187
Query: 227 TYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + SPE + + D+WS G +L E+ T
Sbjct: 188 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
SL + + A + + L+ +H DL N ++ + ++K+ DFG + ++ Y
Sbjct: 127 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDY 184
Query: 227 TYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + SPE + + D+WS G +L E+ T
Sbjct: 185 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
SL + + A + + L+ +H DL N ++ + ++K+ DFG + ++ Y
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDY 180
Query: 227 TYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + SPE + + D+WS G +L E+ T
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
SL + + A + + L+ +H DL N ++ + ++K+ DFG + ++ Y
Sbjct: 158 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDY 215
Query: 227 TYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + SPE + + D+WS G +L E+ T
Sbjct: 216 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
SL + + A + + L+ +H DL N ++ + ++K+ DFG + ++ Y
Sbjct: 126 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDY 183
Query: 227 TYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + SPE + + D+WS G +L E+ T
Sbjct: 184 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
SL + + A + + L+ +H DL N ++ + ++K+ DFG + ++ Y
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDY 186
Query: 227 TYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + SPE + + D+WS G +L E+ T
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
SL + + A + + L+ +H DL N ++ + ++K+ DFG + ++ Y
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDY 186
Query: 227 TYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + SPE + + D+WS G +L E+ T
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
SL + + A + + L+ +H DL N ++ + ++K+ DFG + ++ Y
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDY 193
Query: 227 TYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + SPE + + D+WS G +L E+ T
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 167 SLGLIRRFAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSSCYSHQRVY 226
SL + + A + + L+ +H DL N ++ + ++K+ DFG + ++ Y
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDY 193
Query: 227 TYIQSRF-----YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + SPE + + D+WS G +L E+ T
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG--ENEVEQLACIMEILG 285
+ + + E IL Y D+WS G + EL T G + G +E+ + E L
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 249
Query: 286 CPPDEVINT--ASRRRLFFDSKGTPR 309
PP I+ R+ D+ P+
Sbjct: 250 QPPICTIDVYMIMRKCWMIDADSRPK 275
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT-GCPLFPG--ENEVEQLACIMEILG 285
+ + + E IL Y D+WS G + EL T G + G +E+ + E L
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP 239
Query: 286 CPPDEVINT--ASRRRLFFDSKGTPR 309
PP I+ R+ D+ P+
Sbjct: 240 QPPICTIDVYMIMRKCWMIDADSRPK 265
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 20/92 (21%)
Query: 185 LHRENIIHCDLKPENVLLKQRGSSSI-KVIDFGSSCYSHQRVYTYIQSRFYR-------- 235
L + IH D+ N LL G + K+ DFG + Q +Y ++ +YR
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----QDIY---RASYYRKGGCAMLP 209
Query: 236 ----SPEVILGLPYGPPIDMWSLGCILAELYT 263
PE + + D WS G +L E+++
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 174 FAFSLVQCLRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS--CYSHQRVYTYIQS 231
+ + + + L ++H DL NVL+K +K+ DFG + + ++ Y
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 232 RF---YRSPEVILGLPYGPPIDMWSLGCILAELYT 263
+ + + E IL Y D+WS G + EL T
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 182 LRLLHRENIIHCDLKPENVLLKQRGSSSIKVIDFGSS-------CYSHQRVYTYIQSRFY 234
++ L +N +H +L NVLL R + K+ DFG S Y R ++Y
Sbjct: 449 MKYLEEKNFVHRNLAARNVLLVNRHYA--KISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 235 RSPEVILGLPYGPPIDMWSLGCILAE-LYTGCPLFPGENEVEQLACIME--ILGCPPD 289
+PE I + D+WS G + E L G + E +A I + + CPP+
Sbjct: 507 -APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 563
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,725,150
Number of Sequences: 62578
Number of extensions: 592632
Number of successful extensions: 3937
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 302
Number of HSP's that attempted gapping in prelim test: 1278
Number of HSP's gapped (non-prelim): 1762
length of query: 429
length of database: 14,973,337
effective HSP length: 102
effective length of query: 327
effective length of database: 8,590,381
effective search space: 2809054587
effective search space used: 2809054587
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)