Your job contains 1 sequence.
>psy17274
MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA
VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA
FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNIQD
IRDN
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17274
(184 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011224 - symbol:heph "hephaestus" species:7227 "D... 741 2.2e-73 1
UNIPROTKB|F1MPG6 - symbol:F1MPG6 "Uncharacterized protein... 651 7.6e-64 1
UNIPROTKB|F1PXP9 - symbol:PTBP3 "Uncharacterized protein"... 651 7.6e-64 1
UNIPROTKB|Q06A95 - symbol:ROD1 "ROD1" species:9823 "Sus s... 651 7.6e-64 1
ZFIN|ZDB-GENE-091116-1 - symbol:ptbp3 "polypyrimidine tra... 651 7.6e-64 1
MGI|MGI:1923334 - symbol:Ptbp3 "polypyrimidine tract bind... 649 1.2e-63 1
RGD|621671 - symbol:Ptbp3 "polypyrimidine tract binding p... 647 2.0e-63 1
UNIPROTKB|F1LM18 - symbol:Ptbp1 "Polypyrimidine tract-bin... 646 2.6e-63 1
UNIPROTKB|Q6P736 - symbol:Ptbp1 "Polypyrimidine tract bin... 646 2.6e-63 1
UNIPROTKB|O95758 - symbol:PTBP3 "Polypyrimidine tract-bin... 645 3.3e-63 1
RGD|62047 - symbol:Ptbp1 "polypyrimidine tract binding pr... 643 5.4e-63 1
WB|WBGene00004207 - symbol:ptb-1 species:6239 "Caenorhabd... 639 1.4e-62 1
UNIPROTKB|Q8WN55 - symbol:PTBP1 "Polypyrimidine tract-bin... 635 3.8e-62 1
UNIPROTKB|F1PCJ7 - symbol:PTBP1 "Uncharacterized protein"... 634 4.8e-62 1
UNIPROTKB|J9P5T5 - symbol:PTBP1 "Uncharacterized protein"... 634 4.8e-62 1
UNIPROTKB|A6NLN1 - symbol:PTBP1 "Polypyrimidine tract-bin... 633 6.2e-62 1
UNIPROTKB|P26599 - symbol:PTBP1 "Polypyrimidine tract-bin... 633 6.2e-62 1
UNIPROTKB|E1BVR1 - symbol:PTBP1 "Uncharacterized protein"... 631 1.0e-61 1
UNIPROTKB|F1P5K0 - symbol:PTBP1 "Uncharacterized protein"... 631 1.0e-61 1
UNIPROTKB|F1S6R7 - symbol:PTBP1 "Polypyrimidine tract-bin... 629 1.6e-61 1
UNIPROTKB|F1NRD6 - symbol:PTBP2 "Uncharacterized protein"... 621 1.2e-60 1
UNIPROTKB|Q29099 - symbol:PTBP1 "Polypyrimidine tract-bin... 620 1.5e-60 1
UNIPROTKB|E2RSK4 - symbol:PTBP2 "Uncharacterized protein"... 618 2.4e-60 1
UNIPROTKB|B4DSS8 - symbol:PTBP2 "Polypyrimidine tract-bin... 618 2.4e-60 1
UNIPROTKB|F1S548 - symbol:LOC100739008 "Uncharacterized p... 618 2.4e-60 1
UNIPROTKB|F1S549 - symbol:LOC100515203 "Uncharacterized p... 618 2.4e-60 1
UNIPROTKB|I3LDE4 - symbol:LOC100515203 "Uncharacterized p... 618 2.4e-60 1
UNIPROTKB|I3LP39 - symbol:LOC100515203 "Uncharacterized p... 618 2.4e-60 1
ZFIN|ZDB-GENE-050522-492 - symbol:ptbp1a "polypyrimidine ... 616 3.9e-60 1
ZFIN|ZDB-GENE-030131-9796 - symbol:ptbp1b "polypyrimidine... 614 6.4e-60 1
UNIPROTKB|Q9UKA9 - symbol:PTBP2 "Polypyrimidine tract-bin... 609 2.2e-59 1
MGI|MGI:1860489 - symbol:Ptbp2 "polypyrimidine tract bind... 609 2.2e-59 1
RGD|1359267 - symbol:Ptbp2 "polypyrimidine tract binding ... 609 2.2e-59 1
ZFIN|ZDB-GENE-060810-49 - symbol:ptbp2b "polypyrimidine t... 602 1.2e-58 1
ZFIN|ZDB-GENE-050320-141 - symbol:ptbp2a "polypyrimidine ... 597 4.0e-58 1
RGD|727953 - symbol:Smptb "polypyrimidine tract-binding p... 582 1.6e-56 1
UNIPROTKB|D4AB53 - symbol:Ptbp1 "Polypyrimidine tract-bin... 544 1.7e-52 1
MGI|MGI:97791 - symbol:Ptbp1 "polypyrimidine tract bindin... 525 1.7e-50 1
UNIPROTKB|F1LY02 - symbol:F1LY02 "Uncharacterized protein... 500 7.7e-48 1
DICTYBASE|DDB_G0284321 - symbol:DDB_G0284321 "putative po... 446 3.5e-41 1
TAIR|locus:2018630 - symbol:PTB3 "polypyrimidine tract-bi... 268 6.0e-23 1
DICTYBASE|DDB_G0278105 - symbol:DDB_G0278105 "heterogeneo... 257 2.3e-21 1
DICTYBASE|DDB_G0275365 - symbol:DDB_G0275365 "Heterogeneo... 199 1.1e-19 2
RGD|1359551 - symbol:Fblim1 "filamin binding LIM protein ... 191 4.2e-15 1
FB|FBgn0003435 - symbol:sm "smooth" species:7227 "Drosoph... 193 1.7e-14 1
UNIPROTKB|K7EK45 - symbol:PTBP1 "Polypyrimidine tract-bin... 184 2.3e-14 1
UNIPROTKB|I3LPU8 - symbol:HNRNPL "Uncharacterized protein... 184 2.3e-14 1
UNIPROTKB|B7WPG3 - symbol:HNRPLL "Heterogeneous nuclear r... 190 4.1e-14 1
UNIPROTKB|Q5JB52 - symbol:HNRPLL "Stromal RNA regulating ... 190 4.1e-14 1
MGI|MGI:104816 - symbol:Hnrnpl "heterogeneous nuclear rib... 191 4.2e-14 1
UNIPROTKB|F2Z3R2 - symbol:Hnrnpl "Protein Hnrnpl" species... 191 4.2e-14 1
UNIPROTKB|F1LQ48 - symbol:Hnrnpl "Protein Hnrnpl" species... 191 4.3e-14 1
UNIPROTKB|F1N7G0 - symbol:HNRPLL "Uncharacterized protein... 190 4.6e-14 1
UNIPROTKB|D6W592 - symbol:HNRPLL "Heterogeneous nuclear r... 190 4.6e-14 1
UNIPROTKB|Q8WVV9 - symbol:HNRPLL "Heterogeneous nuclear r... 190 4.6e-14 1
UNIPROTKB|F1LPP9 - symbol:Hnrnpl "Protein Hnrnpl" species... 191 4.6e-14 1
UNIPROTKB|J9P3Y8 - symbol:HNRPLL "Uncharacterized protein... 190 4.7e-14 1
UNIPROTKB|F1P0T4 - symbol:HNRPLL "Uncharacterized protein... 185 1.2e-13 1
UNIPROTKB|I3L8B8 - symbol:HNRPLL "Uncharacterized protein... 184 1.7e-13 1
UNIPROTKB|I3LG16 - symbol:HNRPLL "Uncharacterized protein... 184 2.0e-13 1
UNIPROTKB|E1BIB4 - symbol:HNRNPL "Uncharacterized protein... 184 2.4e-13 1
UNIPROTKB|E2R944 - symbol:HNRNPL "Uncharacterized protein... 184 2.4e-13 1
UNIPROTKB|P14866 - symbol:HNRNPL "Heterogeneous nuclear r... 184 2.4e-13 1
MGI|MGI:1919942 - symbol:Hnrpll "heterogeneous nuclear ri... 175 2.2e-12 1
RGD|1305861 - symbol:Hnrpll "heterogeneous nuclear ribonu... 175 2.2e-12 1
GENEDB_PFALCIPARUM|PFF0320c - symbol:PFF0320c "polypyrimi... 172 5.6e-12 1
UNIPROTKB|C6KSR3 - symbol:PFF0320c "Polypyrimidine tract ... 172 5.6e-12 1
ZFIN|ZDB-GENE-040426-710 - symbol:hnrpl "heterogeneous nu... 170 6.5e-12 1
ZFIN|ZDB-GENE-040426-2707 - symbol:hnrnpl2 "heterogeneous... 168 1.0e-11 1
UNIPROTKB|F1LZ79 - symbol:F1LZ79 "Uncharacterized protein... 139 1.2e-08 1
UNIPROTKB|F1M040 - symbol:F1M040 "Uncharacterized protein... 136 2.6e-08 1
UNIPROTKB|H7C464 - symbol:HNRPLL "Heterogeneous nuclear r... 125 4.2e-08 1
RGD|71059 - symbol:Hnrnpl "heterogeneous nuclear ribonucl... 106 5.2e-06 1
UNIPROTKB|A8YXY5 - symbol:PTBP1 "PTBP1 protein" species:9... 121 1.8e-05 1
WB|WBGene00016624 - symbol:C44B7.2 species:6239 "Caenorha... 120 3.9e-05 1
UNIPROTKB|F1Q0F6 - symbol:F1Q0F6 "Uncharacterized protein... 116 9.2e-05 1
UNIPROTKB|C9IZL7 - symbol:NONO "Non-POU domain-containing... 110 9.5e-05 1
UNIPROTKB|C9JYS8 - symbol:NONO "Non-POU domain-containing... 110 0.00016 1
RGD|1549738 - symbol:Nono "non-POU domain containing, oct... 113 0.00023 1
UNIPROTKB|G5EH29 - symbol:MGCH7_ch7g848 "RNA binding prot... 114 0.00025 1
SGD|S000001448 - symbol:MSL1 "U2B component of U2 snRNP" ... 89 0.00052 1
UNIPROTKB|Q2KJ42 - symbol:NONO "Uncharacterized protein" ... 110 0.00053 1
UNIPROTKB|F1PTP3 - symbol:NONO "Uncharacterized protein" ... 110 0.00053 1
UNIPROTKB|Q15233 - symbol:NONO "Non-POU domain-containing... 110 0.00053 1
UNIPROTKB|I3LSU1 - symbol:NONO "Uncharacterized protein" ... 110 0.00053 1
MGI|MGI:1855692 - symbol:Nono "non-POU-domain-containing,... 110 0.00054 1
UNIPROTKB|G3N361 - symbol:NONO "Uncharacterized protein" ... 110 0.00063 1
WB|WBGene00015943 - symbol:tiar-1 species:6239 "Caenorhab... 92 0.00075 2
>FB|FBgn0011224 [details] [associations]
symbol:heph "hephaestus" species:7227 "Drosophila
melanogaster" [GO:0007286 "spermatid development" evidence=IMP]
[GO:0008187 "poly-pyrimidine tract binding" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0007219 "Notch
signaling pathway" evidence=IMP] [GO:0008586 "imaginal disc-derived
wing vein morphogenesis" evidence=IMP] [GO:0008587 "imaginal
disc-derived wing margin morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0007319 "negative regulation of oskar mRNA
translation" evidence=IMP] [GO:0008103 "oocyte microtubule
cytoskeleton polarization" evidence=IMP] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0000900 "translation repressor activity,
nucleic acid binding" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IGI] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007291 "sperm individualization" evidence=IMP]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0008103 GO:GO:0000166 GO:GO:0008586
Gene3D:3.30.70.330 GO:GO:0007291 GO:GO:0003730 GO:GO:0030529
GO:GO:0000398 GO:GO:0000900 GO:GO:0008587 GO:GO:0007319
GO:GO:0008187 CTD:9843 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 KO:K14948 UniGene:Dm.19417
GeneID:48571 KEGG:dme:Dmel_CG31000 FlyBase:FBgn0011224 ChiTaRS:HEPH
GenomeRNAi:48571 NextBio:839481 HSSP:P26599 EMBL:AY052367
EMBL:BT030984 RefSeq:NP_001163787.1 RefSeq:NP_001163790.1
RefSeq:NP_788780.1 SMR:Q95UI6 STRING:Q95UI6
EnsemblMetazoa:FBtr0085881 EnsemblMetazoa:FBtr0300263
EnsemblMetazoa:FBtr0300266 UCSC:CG31000-RH InParanoid:Q95UI6
Uniprot:Q95UI6
Length = 789
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 141/178 (79%), Positives = 160/178 (89%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMAE QA+LAM H+DKLR++GK +RVM SKHQA
Sbjct: 612 LFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQA 671
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLPKEGQPDAGLT+DY+ +PLHRFKKPGSKN+QNIYPPS TLHLSNIP+S +ED++KEA
Sbjct: 672 VQLPKEGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEA 731
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
FT F VK FKFFPKDRKMALLQL S+EEA+ ALI+MHNHQLSE +HLRVSFSKSNI
Sbjct: 732 FTSNSFEVKAFKFFPKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKSNI 789
>UNIPROTKB|F1MPG6 [details] [associations]
symbol:F1MPG6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033119 "negative regulation of RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0033119 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:PPSVTMD EMBL:DAAA02024547 IPI:IPI00700660
Ensembl:ENSBTAT00000022272 Uniprot:F1MPG6
Length = 523
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 124/178 (69%), Positives = 148/178 (83%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKI++NKK++AL+QMA+++QA LAM H+ R++GK +R +SKHQA
Sbjct: 346 LFILFGVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQA 405
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKD++ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SVT D+LK
Sbjct: 406 VQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 465
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
FTE G +VK FKFF KDRKMAL+QL S+EEAI ALI++HNH L E HLRVSFSKS I
Sbjct: 466 FTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI 523
>UNIPROTKB|F1PXP9 [details] [associations]
symbol:PTBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 OMA:PPSVTMD
EMBL:AAEX03008069 EMBL:AAEX03008070 Ensembl:ENSCAFT00000004839
Uniprot:F1PXP9
Length = 521
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 124/178 (69%), Positives = 148/178 (83%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKI++NKK++AL+QMA+++QA LAM H+ R++GK +R +SKHQA
Sbjct: 344 LFILFGVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQA 403
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKD++ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SVT D+LK
Sbjct: 404 VQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 463
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
FTE G +VK FKFF KDRKMAL+QL S+EEAI ALI++HNH L E HLRVSFSKS I
Sbjct: 464 FTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI 521
>UNIPROTKB|Q06A95 [details] [associations]
symbol:ROD1 "ROD1" species:9823 "Sus scrofa" [GO:0033119
"negative regulation of RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0033119 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 HOVERGEN:HBG069548 eggNOG:NOG263741
HOGENOM:HOG000231699 OrthoDB:EOG4GMTXQ OMA:PPSVTMD EMBL:CU234201
EMBL:DQ972969 RefSeq:NP_001070683.1 UniGene:Ssc.16910 SMR:Q06A95
Ensembl:ENSSSCT00000006012 GeneID:768100 KEGG:ssc:768100
CTD:100701891 Uniprot:Q06A95
Length = 523
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 124/178 (69%), Positives = 148/178 (83%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKI++NKK++AL+QMA+++QA LAM H+ R++GK +R +SKHQA
Sbjct: 346 LFILFGVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQA 405
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKD++ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SVT D+LK
Sbjct: 406 VQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 465
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
FTE G +VK FKFF KDRKMAL+QL S+EEAI ALI++HNH L E HLRVSFSKS I
Sbjct: 466 FTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI 523
>ZFIN|ZDB-GENE-091116-1 [details] [associations]
symbol:ptbp3 "polypyrimidine tract binding protein 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-091116-1 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 CTD:9991
OMA:PPSVTMD EMBL:BX510369 EMBL:CR931761 IPI:IPI00493597
RefSeq:XP_001335967.1 UniGene:Dr.40305 Ensembl:ENSDART00000040308
Ensembl:ENSDART00000146727 GeneID:798982 KEGG:dre:798982
NextBio:20933630 Uniprot:E7FB37
Length = 522
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 125/178 (70%), Positives = 146/178 (82%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++ALIQMA++ QA LAM H++ R++GK +RV ISKHQ
Sbjct: 345 LFILFGVYGDVHRVKILFNKKENALIQMADATQAQLAMSHLNGQRLYGKVIRVTISKHQT 404
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKD++ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP S T+D LK+
Sbjct: 405 VQLPREGQEDQGLTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSTTDDFLKDL 464
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G+TVK FKFF KDRKMAL+QL S+EEAI ALI +HNH L E HLRVSFSKS I
Sbjct: 465 FASSGYTVKAFKFFQKDRKMALIQLGSVEEAIQALIHLHNHDLGENHHLRVSFSKSTI 522
>MGI|MGI:1923334 [details] [associations]
symbol:Ptbp3 "polypyrimidine tract binding protein 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0033119 "negative regulation of
RNA splicing" evidence=ISO] [GO:0043249 "erythrocyte maturation"
evidence=IEA] [GO:0045595 "regulation of cell differentiation"
evidence=ISO] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1923334
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0043249 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 HOVERGEN:HBG069548 eggNOG:NOG263741
HOGENOM:HOG000231699 OrthoDB:EOG4GMTXQ CTD:9991 EMBL:AK033732
EMBL:AK088560 EMBL:AL824704 EMBL:BC006638 EMBL:BC057641
IPI:IPI00221840 IPI:IPI00975110 RefSeq:NP_659153.2
RefSeq:NP_835458.1 UniGene:Mm.331640 ProteinModelPortal:Q8BHD7
SMR:Q8BHD7 STRING:Q8BHD7 PhosphoSite:Q8BHD7 PaxDb:Q8BHD7
PRIDE:Q8BHD7 Ensembl:ENSMUST00000030076 Ensembl:ENSMUST00000148331
Ensembl:ENSMUST00000172768 GeneID:230257 KEGG:mmu:230257
UCSC:uc008szw.2 UCSC:uc008szx.2 InParanoid:A2ANH0 ChiTaRS:PTBP3
NextBio:379861 Bgee:Q8BHD7 CleanEx:MM_ROD1 Genevestigator:Q8BHD7
GermOnline:ENSMUSG00000028382 Uniprot:Q8BHD7
Length = 523
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 124/178 (69%), Positives = 147/178 (82%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKI++NKK++AL+QMA++ QA LAM H+ R++GK +R +SKHQA
Sbjct: 346 LFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQA 405
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKD++ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SVT D+LK
Sbjct: 406 VQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 465
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
FTE G +VK FKFF KDRKMAL+QL S+EEAI ALI++HNH L E HLRVSFSKS I
Sbjct: 466 FTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI 523
>RGD|621671 [details] [associations]
symbol:Ptbp3 "polypyrimidine tract binding protein 3"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0033119 "negative
regulation of RNA splicing" evidence=IEA;ISO] [GO:0043249
"erythrocyte maturation" evidence=IEA] [GO:0045595 "regulation of
cell differentiation" evidence=IMP] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:621671 GO:GO:0005634 GO:GO:0045595 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0033119
GO:GO:0043249 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ CTD:9991 OMA:PPSVTMD EMBL:AB023966
IPI:IPI00326775 RefSeq:NP_112636.1 UniGene:Rn.162818
ProteinModelPortal:Q9Z118 SMR:Q9Z118 STRING:Q9Z118 PRIDE:Q9Z118
Ensembl:ENSRNOT00000022107 GeneID:83515 KEGG:rno:83515
UCSC:RGD:621671 InParanoid:Q9Z118 NextBio:615974
Genevestigator:Q9Z118 GermOnline:ENSRNOG00000016334 Uniprot:Q9Z118
Length = 523
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 123/178 (69%), Positives = 147/178 (82%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKI++NKK++AL+QMA++ QA +AM H+ R++GK +R +SKHQA
Sbjct: 346 LFILFGVYGDVHRVKIMFNKKENALVQMADASQAQIAMNHLSGQRLYGKVLRATLSKHQA 405
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKD++ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SVT D+LK
Sbjct: 406 VQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNL 465
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
FTE G +VK FKFF KDRKMAL+QL S+EEAI ALI++HNH L E HLRVSFSKS I
Sbjct: 466 FTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI 523
>UNIPROTKB|F1LM18 [details] [associations]
symbol:Ptbp1 "Polypyrimidine tract-binding protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:62047 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 IPI:IPI00562850
Ensembl:ENSRNOT00000044865 ArrayExpress:F1LM18 Uniprot:F1LM18
Length = 554
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 121/178 (67%), Positives = 147/178 (82%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ QA LAM H++ ++ GK +R+ +SKHQ+
Sbjct: 377 LFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKSVRITLSKHQS 436
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY +SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV+ED+LK
Sbjct: 437 VQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 496
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEA+ ALI++HNH L E HLRVSFSKS I
Sbjct: 497 FSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLGENHHLRVSFSKSTI 554
>UNIPROTKB|Q6P736 [details] [associations]
symbol:Ptbp1 "Polypyrimidine tract binding protein 1,
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
RGD:62047 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH474029 TIGRFAMs:TIGR01649
CTD:5725 HOVERGEN:HBG069548 KO:K13218 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ IPI:IPI00390239 UniGene:Rn.64440 EMBL:BC061858
RefSeq:NP_001257986.1 RefSeq:NP_071961.2 SMR:Q6P736 STRING:Q6P736
Ensembl:ENSRNOT00000030357 GeneID:29497 KEGG:rno:29497
InParanoid:Q6P736 Genevestigator:Q6P736 Uniprot:Q6P736
Length = 556
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 121/178 (67%), Positives = 147/178 (82%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ QA LAM H++ ++ GK +R+ +SKHQ+
Sbjct: 379 LFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKSVRITLSKHQS 438
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY +SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV+ED+LK
Sbjct: 439 VQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 498
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEA+ ALI++HNH L E HLRVSFSKS I
Sbjct: 499 FSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLGENHHLRVSFSKSTI 556
>UNIPROTKB|O95758 [details] [associations]
symbol:PTBP3 "Polypyrimidine tract-binding protein 3"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0043249 "erythrocyte maturation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0045595 "regulation of cell
differentiation" evidence=IEA] [GO:0033119 "negative regulation of
RNA splicing" evidence=IDA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0045595 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471105
GO:GO:0033119 GO:GO:0009653 GO:GO:0043249 TIGRFAMs:TIGR01649
HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ EMBL:AK001685 EMBL:AK302558 EMBL:CR749471
EMBL:AL158824 EMBL:AL359073 EMBL:BC039896 EMBL:BC044585
EMBL:BI463123 EMBL:AB023967 IPI:IPI00159072 IPI:IPI00384710
IPI:IPI00470879 IPI:IPI00640632 IPI:IPI00915287 IPI:IPI00915299
IPI:IPI00915400 RefSeq:NP_001157260.1 RefSeq:NP_001157262.1
RefSeq:NP_001231826.1 RefSeq:NP_001231827.1 RefSeq:NP_005147.3
UniGene:Hs.269988 ProteinModelPortal:O95758 SMR:O95758
IntAct:O95758 STRING:O95758 PhosphoSite:O95758 PaxDb:O95758
PRIDE:O95758 Ensembl:ENST00000210227 Ensembl:ENST00000334318
Ensembl:ENST00000343327 Ensembl:ENST00000374255
Ensembl:ENST00000374257 Ensembl:ENST00000458258 GeneID:9991
KEGG:hsa:9991 UCSC:uc004bfv.3 UCSC:uc004bfw.3 UCSC:uc004bfx.3
UCSC:uc004bfz.3 CTD:9991 GeneCards:GC09M114981 H-InvDB:HIX0008290
HGNC:HGNC:10253 MIM:607527 neXtProt:NX_O95758 PharmGKB:PA34625
OMA:PPSVTMD GenomeRNAi:9991 NextBio:37743 ArrayExpress:O95758
Bgee:O95758 CleanEx:HS_ROD1 Genevestigator:O95758
GermOnline:ENSG00000119314 Uniprot:O95758
Length = 552
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 123/178 (69%), Positives = 147/178 (82%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKI++NKK++AL+QMA+++QA LAM H+ R++GK +R +SKHQA
Sbjct: 375 LFILFGVYGDVHRVKIMFNKKENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQA 434
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKD++ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SVT D+LK
Sbjct: 435 VQLPREGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNL 494
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F E G +VK FKFF KDRKMAL+QL S+EEAI ALI++HNH L E HLRVSFSKS I
Sbjct: 495 FIEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI 552
>RGD|62047 [details] [associations]
symbol:Ptbp1 "polypyrimidine tract binding protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISO;ISS] [GO:0003697 "single-stranded DNA
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=IEA;TAS]
[GO:0004519 "endonuclease activity" evidence=TAS] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0033119
"negative regulation of RNA splicing" evidence=ISO] [GO:0036002
"pre-mRNA binding" evidence=ISO] [GO:0048025 "negative regulation of
mRNA splicing, via spliceosome" evidence=ISO;ISS] [GO:0051148
"negative regulation of muscle cell differentiation"
evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:62047
GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003697 GO:GO:0004519
GO:GO:0048025 GO:GO:0000381 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548
GO:GO:0051148 eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:X60789
EMBL:X60790 EMBL:X74565 IPI:IPI00231555 IPI:IPI00390239 PIR:S15552
PIR:S36629 UniGene:Rn.64440 ProteinModelPortal:Q00438 SMR:Q00438
STRING:Q00438 PhosphoSite:Q00438 PRIDE:Q00438 UCSC:RGD:62047
InParanoid:Q00438 ChEMBL:CHEMBL2786 NextBio:609388
ArrayExpress:Q00438 Genevestigator:Q00438
GermOnline:ENSRNOG00000010448 Uniprot:Q00438
Length = 555
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 120/178 (67%), Positives = 147/178 (82%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL++MA+ QA LAM H++ ++ GK +R+ +SKHQ+
Sbjct: 378 LFILFGVYGDVQRVKILFNKKENALVEMADGSQAQLAMSHLNGHKLHGKSVRITLSKHQS 437
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY +SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV+ED+LK
Sbjct: 438 VQLPREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSL 497
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEA+ ALI++HNH L E HLRVSFSKS I
Sbjct: 498 FSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLGENHHLRVSFSKSTI 555
>WB|WBGene00004207 [details] [associations]
symbol:ptb-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0000398 EMBL:Z36948 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 eggNOG:NOG263741 HOGENOM:HOG000231699
OMA:IKMHNHK PIR:A88299 PIR:T20381 RefSeq:NP_741041.1 HSSP:P26599
ProteinModelPortal:Q18999 SMR:Q18999 DIP:DIP-24857N IntAct:Q18999
MINT:MINT-1089938 STRING:Q18999 PaxDb:Q18999 PRIDE:Q18999
EnsemblMetazoa:D2089.4a GeneID:174647 KEGG:cel:CELE_D2089.4
UCSC:D2089.4a CTD:174647 WormBase:D2089.4a InParanoid:Q18999
NextBio:884900 ArrayExpress:Q18999 Uniprot:Q18999
Length = 615
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 123/178 (69%), Positives = 144/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV+RVKILYNKKD+ALIQ +E QA LA+ H+DK++ + +RV SKH
Sbjct: 438 LFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTN 497
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQ+PKEGQPDAGLT+DY S LHRFKKPGSKN+ NIYPP TLHLSNIP SV+E++LKE
Sbjct: 498 VQMPKEGQPDAGLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEM 557
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F E GF VK FKFFPKD KMAL QL+ IE AI ALI MHNH+L+E +HLRVSFSKS I
Sbjct: 558 FAEAGFAVKAFKFFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 615
>UNIPROTKB|Q8WN55 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0051148 "negative regulation of muscle cell differentiation"
evidence=ISS] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISS] [GO:0048025 "negative regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0036002 "pre-mRNA
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0048025 GO:GO:0000381 GO:GO:0036002 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 EMBL:AF445640 IPI:IPI00712263
RefSeq:NP_776867.1 UniGene:Bt.9031 ProteinModelPortal:Q8WN55
SMR:Q8WN55 PRIDE:Q8WN55 Ensembl:ENSBTAT00000066209 GeneID:282018
KEGG:bta:282018 CTD:5725 HOVERGEN:HBG069548 KO:K13218 OMA:SEECAQT
NextBio:20805882 ArrayExpress:Q8WN55 GO:GO:0051148 Uniprot:Q8WN55
Length = 531
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 120/178 (67%), Positives = 145/178 (81%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVK+L+NKK++AL+QMA+ QA LAM H++ ++ GK +R+ +SKHQ+
Sbjct: 354 LFILFGVYGDVQRVKVLFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQS 413
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSNIP S++ED+LK
Sbjct: 414 VQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDLKIL 473
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEAI ALI +HNH L E HLRVSFSKS I
Sbjct: 474 FSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKSTI 531
>UNIPROTKB|F1PCJ7 [details] [associations]
symbol:PTBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051148 "negative regulation of muscle cell
differentiation" evidence=IEA] [GO:0048025 "negative regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0036002 "pre-mRNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0048025 GO:GO:0000381
GO:GO:0036002 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:SEECAQT GO:GO:0051148 EMBL:AAEX03012673
Ensembl:ENSCAFT00000031317 Uniprot:F1PCJ7
Length = 558
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 122/178 (68%), Positives = 144/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ QA LAM H++ ++ GK +R+ +SKHQ
Sbjct: 381 LFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQN 440
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV+ED+LK
Sbjct: 441 VQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKIL 500
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEAI ALI +HNH L E HLRVSFSKS I
Sbjct: 501 FSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKSTI 558
>UNIPROTKB|J9P5T5 [details] [associations]
symbol:PTBP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 CTD:5725 KO:K13218 EMBL:AAEX03012673
RefSeq:XP_542215.2 ProteinModelPortal:J9P5T5
Ensembl:ENSCAFT00000049054 GeneID:485097 KEGG:cfa:485097
Uniprot:J9P5T5
Length = 557
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 122/178 (68%), Positives = 144/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ QA LAM H++ ++ GK +R+ +SKHQ
Sbjct: 380 LFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQN 439
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV+ED+LK
Sbjct: 440 VQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKIL 499
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEAI ALI +HNH L E HLRVSFSKS I
Sbjct: 500 FSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKSTI 557
>UNIPROTKB|A6NLN1 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471242
TIGRFAMs:TIGR01649 EMBL:AC006273 UniGene:Hs.172550 DNASU:5725
HGNC:HGNC:9583 PharmGKB:PA33934 GenomeRNAi:5725 NextBio:22252
IPI:IPI00413691 SMR:A6NLN1 STRING:A6NLN1 Ensembl:ENST00000350092
UCSC:uc002lps.2 HOGENOM:HOG000045782 HOVERGEN:HBG055095
Uniprot:A6NLN1
Length = 197
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 120/178 (67%), Positives = 145/178 (81%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ +QA LAM H++ ++ GK +R+ +SKHQ
Sbjct: 20 LFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV+E++LK
Sbjct: 80 VQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVL 139
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEA+ ALI +HNH L E HLRVSFSKS I
Sbjct: 140 FSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI 197
>UNIPROTKB|P26599 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IDA] [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=IDA] [GO:0036002 "pre-mRNA
binding" evidence=IDA] [GO:0033119 "negative regulation of RNA
splicing" evidence=IDA] [GO:0048025 "negative regulation of mRNA
splicing, via spliceosome" evidence=IDA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=TAS]
[GO:0005730 "nucleolus" evidence=TAS] [GO:0008187 "poly-pyrimidine
tract binding" evidence=TAS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0000398 EMBL:CH471242
GO:GO:0048025 GO:GO:0000381 GO:GO:0008187 GO:GO:0036002
TIGRFAMs:TIGR01649 CTD:5725 HOVERGEN:HBG069548 KO:K13218
OMA:SEECAQT GO:GO:0051148 EMBL:X62006 EMBL:X65371 EMBL:X65372
EMBL:X60648 EMBL:X66975 EMBL:BT006819 EMBL:AC006273 EMBL:BC002397
EMBL:BC004383 EMBL:BC013694 IPI:IPI00179964 IPI:IPI00183626
IPI:IPI00334175 PIR:S23016 RefSeq:NP_002810.1 RefSeq:NP_114367.1
RefSeq:NP_114368.1 UniGene:Hs.172550 PDB:1QM9 PDB:1SJQ PDB:1SJR
PDB:2AD9 PDB:2ADB PDB:2ADC PDB:2EVZ PDB:3ZZY PDB:3ZZZ PDBsum:1QM9
PDBsum:1SJQ PDBsum:1SJR PDBsum:2AD9 PDBsum:2ADB PDBsum:2ADC
PDBsum:2EVZ PDBsum:3ZZY PDBsum:3ZZZ ProteinModelPortal:P26599
SMR:P26599 IntAct:P26599 MINT:MINT-1348690 STRING:P26599
PhosphoSite:P26599 DMDM:131528 SWISS-2DPAGE:P26599 PaxDb:P26599
PRIDE:P26599 DNASU:5725 Ensembl:ENST00000349038
Ensembl:ENST00000356948 Ensembl:ENST00000394601 GeneID:5725
KEGG:hsa:5725 UCSC:uc002lpq.2 UCSC:uc002lpr.2 GeneCards:GC19P000797
H-InvDB:HIX0137476 HGNC:HGNC:9583 HPA:CAB013507 MIM:600693
neXtProt:NX_P26599 PharmGKB:PA33934 eggNOG:NOG263741
HOGENOM:HOG000231699 ChEMBL:CHEMBL1293230 EvolutionaryTrace:P26599
GenomeRNAi:5725 NextBio:22252 PMAP-CutDB:P26599 ArrayExpress:P26599
Bgee:P26599 CleanEx:HS_PTBP1 Genevestigator:P26599
GermOnline:ENSG00000011304 Uniprot:P26599
Length = 531
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 120/178 (67%), Positives = 145/178 (81%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ +QA LAM H++ ++ GK +R+ +SKHQ
Sbjct: 354 LFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 413
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV+E++LK
Sbjct: 414 VQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVL 473
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEA+ ALI +HNH L E HLRVSFSKS I
Sbjct: 474 FSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI 531
>UNIPROTKB|E1BVR1 [details] [associations]
symbol:PTBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0036002 "pre-mRNA binding"
evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0048025 GO:GO:0000381 GO:GO:0036002 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:SEECAQT GO:GO:0051148
EMBL:AADN02066656 EMBL:AADN02066657 EMBL:AADN02066658
EMBL:AADN02066659 IPI:IPI00684956 ProteinModelPortal:E1BVR1
Ensembl:ENSGALT00000003042 ArrayExpress:E1BVR1 Uniprot:E1BVR1
Length = 532
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 119/178 (66%), Positives = 144/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ +QA LAM H++ ++ GK +R+ +SKHQ
Sbjct: 355 LFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQT 414
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSNIP S+ E++LK
Sbjct: 415 VQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSIAEEDLKML 474
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEAI +LI +HNH L E HLRVSFSKS I
Sbjct: 475 FSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI 532
>UNIPROTKB|F1P5K0 [details] [associations]
symbol:PTBP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
EMBL:AADN02066656 EMBL:AADN02066657 EMBL:AADN02066658
EMBL:AADN02066659 IPI:IPI00571435 Ensembl:ENSGALT00000003039
ArrayExpress:F1P5K0 Uniprot:F1P5K0
Length = 527
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 119/178 (66%), Positives = 144/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ +QA LAM H++ ++ GK +R+ +SKHQ
Sbjct: 350 LFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGQKLHGKPIRITLSKHQT 409
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSNIP S+ E++LK
Sbjct: 410 VQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSIAEEDLKML 469
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEAI +LI +HNH L E HLRVSFSKS I
Sbjct: 470 FSSNGGMVKGFKFFQKDRKMALIQMGSVEEAIQSLIDLHNHDLGENHHLRVSFSKSTI 527
>UNIPROTKB|F1S6R7 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9823 "Sus scrofa" [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=IEA] [GO:0048025 "negative
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0048025 GO:GO:0000381
GO:GO:0036002 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:SEECAQT GO:GO:0051148 EMBL:FP015903 Ensembl:ENSSSCT00000014665
Uniprot:F1S6R7
Length = 557
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 120/178 (67%), Positives = 144/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ QA LAM H++ ++ GK +R+ +SKHQ
Sbjct: 380 LFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQN 439
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSNIP S++E++LK
Sbjct: 440 VQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEEDLKIL 499
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEAI ALI +HNH L E HLRVSFSKS I
Sbjct: 500 FSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKSTI 557
>UNIPROTKB|F1NRD6 [details] [associations]
symbol:PTBP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006376 "mRNA splice site selection"
evidence=IEA] [GO:0033119 "negative regulation of RNA splicing"
evidence=IEA] [GO:2000177 "regulation of neural precursor cell
proliferation" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0033119
GO:GO:0006376 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:QSQLAMS EMBL:AADN02012892 IPI:IPI00602746
Ensembl:ENSGALT00000008906 ArrayExpress:F1NRD6 Uniprot:F1NRD6
Length = 532
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 355 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQT 414
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 415 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 474
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 475 FANTGGTVKAFKFFQRDHKMALLQMSTVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 532
>UNIPROTKB|Q29099 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9823 "Sus scrofa" [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=ISS] [GO:0000381 "regulation
of alternative mRNA splicing, via spliceosome" evidence=ISS]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0048025 GO:GO:0000381 TIGRFAMs:TIGR01649
CTD:5725 HOVERGEN:HBG069548 KO:K13218 GO:GO:0051148
eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:X93009 PIR:S68857
RefSeq:NP_999396.1 UniGene:Ssc.16210 ProteinModelPortal:Q29099
SMR:Q29099 STRING:Q29099 PRIDE:Q29099 GeneID:397461 KEGG:ssc:397461
OrthoDB:EOG4GMTXQ Uniprot:Q29099
Length = 557
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVY DV RVKIL+NKK++AL+QMA+ QA LAM H++ ++ GK +R+ +SKHQ
Sbjct: 380 LFILFGVYCDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQN 439
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EGQ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSNIP S++E++LK
Sbjct: 440 VQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEEDLKIL 499
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEAI ALI +HNH L E HLRVSFSKS I
Sbjct: 500 FSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKSTI 557
>UNIPROTKB|E2RSK4 [details] [associations]
symbol:PTBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000177 "regulation of neural precursor cell
proliferation" evidence=IEA] [GO:0033119 "negative regulation of
RNA splicing" evidence=IEA] [GO:0006376 "mRNA splice site
selection" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0033119 GO:GO:0006376 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:QSQLAMS EMBL:AAEX03004787
EMBL:AAEX03004788 EMBL:AAEX03004789 EMBL:AAEX03004790
ProteinModelPortal:E2RSK4 PRIDE:E2RSK4 Ensembl:ENSCAFT00000031985
Uniprot:E2RSK4
Length = 532
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 355 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQT 414
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 415 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 474
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 475 FANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 532
>UNIPROTKB|B4DSS8 [details] [associations]
symbol:PTBP2 "Polypyrimidine tract-binding protein 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
HOVERGEN:HBG069548 HOGENOM:HOG000231699 EMBL:AL357150
IPI:IPI00254162 UniGene:Hs.269895 UniGene:Hs.596061 HGNC:HGNC:17662
ChiTaRS:PTBP2 OMA:QSQLAMS EMBL:AK299897 SMR:B4DSS8 STRING:B4DSS8
Ensembl:ENST00000394184 UCSC:uc010otz.1 Uniprot:B4DSS8
Length = 548
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 371 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQT 430
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 431 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 490
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 491 FANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 548
>UNIPROTKB|F1S548 [details] [associations]
symbol:LOC100739008 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 EMBL:FP085536 RefSeq:XP_003481556.1
Ensembl:ENSSSCT00000007534 GeneID:100739008 KEGG:ssc:100739008
OMA:IQMSTIE Uniprot:F1S548
Length = 255
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 78 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQT 137
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 138 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 197
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 198 FANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 255
>UNIPROTKB|F1S549 [details] [associations]
symbol:LOC100515203 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 EMBL:FP085536 EMBL:CU137694
Ensembl:ENSSSCT00000007533 Uniprot:F1S549
Length = 401
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 224 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQT 283
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 284 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 343
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 344 FANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 401
>UNIPROTKB|I3LDE4 [details] [associations]
symbol:LOC100515203 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:2000177 "regulation of neural precursor cell
proliferation" evidence=IEA] [GO:0033119 "negative regulation of
RNA splicing" evidence=IEA] [GO:0006376 "mRNA splice site
selection" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:QSQLAMS EMBL:FP085536 EMBL:CU137694 Ensembl:ENSSSCT00000022271
Uniprot:I3LDE4
Length = 411
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 234 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQT 293
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 294 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 353
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 354 FANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 411
>UNIPROTKB|I3LP39 [details] [associations]
symbol:LOC100515203 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 EMBL:FP085536 EMBL:CU137694
Ensembl:ENSSSCT00000024275 Uniprot:I3LP39
Length = 405
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 228 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQT 287
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 288 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 347
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 348 FANTGGTVKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 405
>ZFIN|ZDB-GENE-050522-492 [details] [associations]
symbol:ptbp1a "polypyrimidine tract binding protein
1a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060472 "positive regulation of cortical granule exocytosis by
elevation of cytosolic calcium ion concentration" evidence=IMP]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
[GO:0045746 "negative regulation of Notch signaling pathway"
evidence=IMP] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=IMP] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050522-492 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0009953 GO:GO:0045746
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 HOVERGEN:HBG069548
KO:K13218 OMA:SEECAQT eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ GO:GO:0060729 EMBL:CR788230 EMBL:BC095372
IPI:IPI00607308 RefSeq:NP_001018313.1 UniGene:Dr.45492 SMR:Q503D3
Ensembl:ENSDART00000017668 GeneID:323490 KEGG:dre:323490 CTD:323490
InParanoid:Q503D3 NextBio:20808275 GO:GO:0060472 Uniprot:Q503D3
Length = 574
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 116/178 (65%), Positives = 141/178 (79%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV+RVKIL+NKK++AL+QM++ QA LAM H++ +++GK +R +SKH
Sbjct: 397 LFILFGVYGDVMRVKILFNKKENALVQMSDGTQAQLAMSHLNGQKLYGKALRATLSKHTT 456
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKDY+ SPLHRFKKPGSKN+ NI+PPS TLHLSNIP SVTED+L+
Sbjct: 457 VQLPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVTEDDLRGL 516
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G VK FKFF KDRKMAL+QL S+EEAI +LI+ HNH L E HLRVSFSKS I
Sbjct: 517 FLSSGAVVKAFKFFQKDRKMALIQLASVEEAIESLIKFHNHDLGENHHLRVSFSKSTI 574
>ZFIN|ZDB-GENE-030131-9796 [details] [associations]
symbol:ptbp1b "polypyrimidine tract binding
protein 1b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-9796
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548
eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:BC091854 IPI:IPI00613822
UniGene:Dr.75263 ProteinModelPortal:Q58EL3 STRING:Q58EL3
InParanoid:Q58EL3 ArrayExpress:Q58EL3 Bgee:Q58EL3 Uniprot:Q58EL3
Length = 586
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 115/178 (64%), Positives = 141/178 (79%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDVLRVKI++NKK++ALIQM++ QA LAM H++ +++G+ +R+ +SKH
Sbjct: 409 LFILFGVYGDVLRVKIMFNKKENALIQMSDGTQAQLAMSHLNGQKLYGRPLRITLSKHTT 468
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQ+P+EG D GLTKDY+ SPLHRFKKPGSKN+ NI+PPS TLHLSNIP SV ED+LK
Sbjct: 469 VQMPREGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKLL 528
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G VK FKFF KDRKMAL+Q+ S+EEAI +LIQ HNH L E HLRVSFSKS I
Sbjct: 529 FGSSGALVKNFKFFQKDRKMALIQMSSVEEAIESLIQFHNHDLGENHHLRVSFSKSTI 586
>UNIPROTKB|Q9UKA9 [details] [associations]
symbol:PTBP2 "Polypyrimidine tract-binding protein 2"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006376 "mRNA splice site
selection" evidence=IEA] [GO:2000177 "regulation of neural
precursor cell proliferation" evidence=IEA] [GO:0033119 "negative
regulation of RNA splicing" evidence=IDA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0033119 GO:GO:0006376 TIGRFAMs:TIGR01649 KO:K14948
HOVERGEN:HBG069548 eggNOG:NOG263741 EMBL:AF176085 EMBL:AB051232
EMBL:AB051233 EMBL:AF530580 EMBL:AF530581 EMBL:AF530582
EMBL:AF530583 EMBL:BK000526 EMBL:AL357150 EMBL:BC016582
IPI:IPI00254162 IPI:IPI00514064 IPI:IPI00641664 IPI:IPI00647067
IPI:IPI00743676 IPI:IPI00748295 RefSeq:NP_067013.1
UniGene:Hs.269895 UniGene:Hs.596061 PDB:2CQ1 PDBsum:2CQ1
ProteinModelPortal:Q9UKA9 SMR:Q9UKA9 IntAct:Q9UKA9
MINT:MINT-1483252 STRING:Q9UKA9 PhosphoSite:Q9UKA9 DMDM:74761983
REPRODUCTION-2DPAGE:IPI00647067 PaxDb:Q9UKA9 PRIDE:Q9UKA9
DNASU:58155 Ensembl:ENST00000236228 Ensembl:ENST00000370197
Ensembl:ENST00000370198 Ensembl:ENST00000426398 GeneID:58155
KEGG:hsa:58155 UCSC:uc001drn.2 UCSC:uc001dro.2 UCSC:uc001drq.3
UCSC:uc001drr.3 CTD:58155 GeneCards:GC01P097187 HGNC:HGNC:17662
HPA:HPA047420 MIM:608449 neXtProt:NX_Q9UKA9 PharmGKB:PA33935
OrthoDB:EOG473PSG ChiTaRS:PTBP2 EvolutionaryTrace:Q9UKA9
GenomeRNAi:58155 NextBio:64859 ArrayExpress:Q9UKA9 Bgee:Q9UKA9
CleanEx:HS_PTBP2 Genevestigator:Q9UKA9 GermOnline:ENSG00000117569
Uniprot:Q9UKA9
Length = 531
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 355 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQT 414
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 415 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 474
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 475 FANTGGTVKAFKFF-QDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 531
>MGI|MGI:1860489 [details] [associations]
symbol:Ptbp2 "polypyrimidine tract binding protein 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IDA] [GO:0006376 "mRNA splice site selection"
evidence=IMP;IDA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0033119 "negative
regulation of RNA splicing" evidence=ISO] [GO:2000177 "regulation
of neural precursor cell proliferation" evidence=IMP]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1860489 GO:GO:0000166
GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0033119
GO:GO:0006376 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
GO:GO:2000177 KO:K14948 HOVERGEN:HBG069548 eggNOG:NOG263741
HOGENOM:HOG000231699 CTD:58155 OrthoDB:EOG473PSG ChiTaRS:PTBP2
EMBL:AF095718 EMBL:AK013734 EMBL:AK137348 EMBL:BC010255
EMBL:AY333752 EMBL:BK000527 IPI:IPI00136002 IPI:IPI00751759
RefSeq:NP_062423.1 UniGene:Mm.29966 ProteinModelPortal:Q91Z31
SMR:Q91Z31 IntAct:Q91Z31 STRING:Q91Z31 PhosphoSite:Q91Z31
PaxDb:Q91Z31 PRIDE:Q91Z31 Ensembl:ENSMUST00000029780 GeneID:56195
KEGG:mmu:56195 UCSC:uc008rdi.1 UCSC:uc008rdk.2 InParanoid:Q91Z31
OMA:QSQLAMS NextBio:312010 Bgee:Q91Z31 CleanEx:MM_PTBP2
Genevestigator:Q91Z31 GermOnline:ENSMUSG00000028134 Uniprot:Q91Z31
Length = 531
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 355 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQT 414
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 415 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 474
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 475 FANTGGTVKAFKFF-QDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 531
>RGD|1359267 [details] [associations]
symbol:Ptbp2 "polypyrimidine tract binding protein 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=IEA;ISO] [GO:0006376
"mRNA splice site selection" evidence=IEA;ISO] [GO:0033119
"negative regulation of RNA splicing" evidence=IEA;ISO] [GO:2000177
"regulation of neural precursor cell proliferation"
evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1359267
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0033119 GO:GO:0006376 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 KO:K14948 HOVERGEN:HBG069548
eggNOG:NOG263741 HOGENOM:HOG000231699 CTD:58155 OrthoDB:EOG473PSG
EMBL:AJ010585 EMBL:BC082076 EMBL:AY333750 IPI:IPI00471764
IPI:IPI00758469 RefSeq:NP_001005555.1 UniGene:Rn.64916
ProteinModelPortal:Q66H20 SMR:Q66H20 STRING:Q66H20 PRIDE:Q66H20
Ensembl:ENSRNOT00000015036 GeneID:310820 KEGG:rno:310820
UCSC:RGD:1359267 InParanoid:Q66H20 NextBio:662705
Genevestigator:Q66H20 GermOnline:ENSRNOG00000010827 Uniprot:Q66H20
Length = 531
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 119/178 (66%), Positives = 143/178 (80%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQMA+ +Q+ LAM H++ +++GK +RV +SKHQ
Sbjct: 355 LFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQT 414
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+ SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV E++L+
Sbjct: 415 VQLPREGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTL 474
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F G TVK FKFF +D KMALLQ+ ++EEAI ALI +HN+ L E HLRVSFSKS I
Sbjct: 475 FANTGGTVKAFKFF-QDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 531
>ZFIN|ZDB-GENE-060810-49 [details] [associations]
symbol:ptbp2b "polypyrimidine tract binding protein
2b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-060810-49 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 KO:K14948
HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ EMBL:BX005269 IPI:IPI00855280
RefSeq:NP_001093477.1 UniGene:Dr.75530 SMR:A5PM68
Ensembl:ENSDART00000038648 GeneID:562434 KEGG:dre:562434 CTD:562434
OMA:YTAVTPQ NextBio:20884409 Uniprot:A5PM68
Length = 538
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 117/178 (65%), Positives = 145/178 (81%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKILYNKKDSALIQM++ +QA LAM H++ +++GK +RV +SKHQ
Sbjct: 362 LFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQT 421
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP+EG D GLTKD+T+SPLHRFKKPGSKNFQNI+PPS TLHLSNIP +VTE++L+
Sbjct: 422 VQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPDNVTEEDLRLL 481
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G TVK FKFF +DRKM+LLQ+ + EEAI ALI +HN+ + LRVSFSKS I
Sbjct: 482 FSNSGGTVKAFKFF-QDRKMSLLQMATAEEAIQALIDLHNYDMGRGHRLRVSFSKSTI 538
>ZFIN|ZDB-GENE-050320-141 [details] [associations]
symbol:ptbp2a "polypyrimidine tract binding protein
2a" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-050320-141
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
EMBL:CU896585 IPI:IPI00996240 Ensembl:ENSDART00000123275
Bgee:F1QG05 Uniprot:F1QG05
Length = 512
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 115/178 (64%), Positives = 142/178 (79%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L GVYGDV RVKIL+NKKDSALIQMA+ +QA LAM H++ ++F K +RV +SKHQ
Sbjct: 336 LFTLFGVYGDVQRVKILFNKKDSALIQMADMNQAQLAMSHLNGQKMFSKIIRVTMSKHQT 395
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP++G D GLTKD+T SPLHRFKKPGSKNFQNI+PPS TLHLSNIP VTE++L+
Sbjct: 396 VQLPRDGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDVTEEDLRVL 455
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G TVK FKFF +D KMAL+Q+ +IEEAI LI +HN+ + HL+VSFSKS I
Sbjct: 456 FSNSGGTVKAFKFF-QDHKMALIQMSTIEEAIQCLIDLHNYNMGNNHHLKVSFSKSTI 512
>RGD|727953 [details] [associations]
symbol:Smptb "polypyrimidine tract-binding protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000380 "alternative mRNA splicing, via spliceosome"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:727953
GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0000380 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOVERGEN:HBG069548 eggNOG:NOG263741 HOGENOM:HOG000231699
OrthoDB:EOG4GMTXQ HSSP:P26599 EMBL:CH474078 EMBL:AY223520
IPI:IPI00331913 RefSeq:NP_877970.1 UniGene:Rn.97598 SMR:Q80XZ1
Ensembl:ENSRNOT00000014611 GeneID:302879 KEGG:rno:302879
UCSC:RGD:727953 CTD:302879 NextBio:650282 Genevestigator:Q80XZ1
Uniprot:Q80XZ1
Length = 588
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 104/178 (58%), Positives = 142/178 (79%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L G YGDV RVKIL+N+K++AL+QMA+ QA LA+ H++ +++GK + +++SKHQ+
Sbjct: 411 LFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQS 470
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
V+LP+EG+ D GLTKDY SPLHRFKKPGSKNFQNI+PPS TLHLSN+P+ V+E+ELK
Sbjct: 471 VKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNL 530
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G+ VK F+FFPK+ KMAL+++ S EEAI AL+ +H H L + H+RVSFS+ I
Sbjct: 531 FSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI 588
>UNIPROTKB|D4AB53 [details] [associations]
symbol:Ptbp1 "Polypyrimidine tract-binding protein 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:62047 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
IPI:IPI00390801 Ensembl:ENSRNOT00000030365 ArrayExpress:D4AB53
Uniprot:D4AB53
Length = 528
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 113/182 (62%), Positives = 133/182 (73%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGDV RVKIL+NKK++AL+QMA+ QA L R Q +S H
Sbjct: 353 LFILFGVYGDVQRVKILFNKKENALVQMADGSQAQL---DEPPERA---QAAWEVSAHHP 406
Query: 61 VQLP----KEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDE 116
V+ P +EGQ D GLTKDY +SPLHRFKKPGSKNFQNI+PPS TLHLSNIP SV+ED+
Sbjct: 407 VKAPECAAREGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDD 466
Query: 117 LKEAFTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKS 176
LK F+ G VKGFKFF KDRKMAL+Q+ S+EEA+ ALI++HNH L E HLRVSFSKS
Sbjct: 467 LKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLGENHHLRVSFSKS 526
Query: 177 NI 178
I
Sbjct: 527 TI 528
>MGI|MGI:97791 [details] [associations]
symbol:Ptbp1 "polypyrimidine tract binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0033119 "negative regulation of RNA
splicing" evidence=ISO] [GO:0036002 "pre-mRNA binding"
evidence=ISO] [GO:0048025 "negative regulation of mRNA splicing,
via spliceosome" evidence=ISO] [GO:0051148 "negative regulation of
muscle cell differentiation" evidence=ISO] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:97791 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0048025
GO:GO:0000381 TIGRFAMs:TIGR01649 HOVERGEN:HBG069548 GO:GO:0051148
eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:X52101 IPI:IPI00749991
UniGene:Mm.265610 ProteinModelPortal:P17225 SMR:P17225
MINT:MINT-1862139 STRING:P17225 PhosphoSite:P17225 PaxDb:P17225
PRIDE:P17225 ChiTaRS:PTBP1 CleanEx:MM_PTBP1 Genevestigator:P17225
GermOnline:ENSMUSG00000006498 Uniprot:P17225
Length = 527
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 110/180 (61%), Positives = 129/180 (71%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMM--HMDKLRVFGKQMRVMISKH 58
+F L GVYGDV RVKIL+NKK++AL+QMA+ QA L R V S+
Sbjct: 352 LFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLGEPPERAQAAREVSAHYTVQASEC 411
Query: 59 QAVQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
A +EGQ D GLTKDY +SPL RFKKPGSKNFQNI+PPS TLHLSNIP SV+ED+LK
Sbjct: 412 AAA---REGQEDQGLTKDYGSSPL-RFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLK 467
Query: 119 EAFTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKSNI 178
F+ G VKGFKFF KDRKMAL+Q+ S+EEA+ ALI++HNH L E HLRVSFSKS I
Sbjct: 468 SLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLGENHHLRVSFSKSTI 527
>UNIPROTKB|F1LY02 [details] [associations]
symbol:F1LY02 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00550000074508
IPI:IPI00778797 Ensembl:ENSRNOT00000036047 Uniprot:F1LY02
Length = 494
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 94/169 (55%), Positives = 124/169 (73%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F L GVYGD+ +VKIL+NK ++AL+Q + QA LA+ H+++ ++ G + + SKH +
Sbjct: 327 LFILLGVYGDMQQVKILFNK-ENALVQSTDGSQAQLAISHLNRHKLHGTSVHITPSKHNS 385
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
VQLP EGQ D TKDY++SPLH FKKPGSKNF NI+PPS TLHLSNIP SV+ED+ K
Sbjct: 386 VQLPHEGQKDQRQTKDYSSSPLHHFKKPGSKNFWNIFPPSATLHLSNIPPSVSEDDFKSL 445
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHL 169
F+ G VKGFKFF KD KM L+Q+ +EEA+ ALI+++NH L HL
Sbjct: 446 FSSNGGMVKGFKFFKKDHKMILIQMGPVEEAVPALIELYNHDLEGNHHL 494
>DICTYBASE|DDB_G0284321 [details] [associations]
symbol:DDB_G0284321 "putative polypyrimidine tract
binding protein (PTBP1)" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0284321 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000064 eggNOG:NOG263741 OMA:DATENEI
RefSeq:XP_638677.1 ProteinModelPortal:Q54PW8 SMR:Q54PW8
EnsemblProtists:DDB0233645 GeneID:8624506 KEGG:ddi:DDB_G0284321
InParanoid:Q54PW8 Uniprot:Q54PW8
Length = 892
Score = 446 (162.1 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 87/189 (46%), Positives = 130/189 (68%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L G+YGD +RVKIL+N+KD+ALIQM + QA L + + G +RV +SKH+
Sbjct: 703 LFTLFGIYGDPVRVKILFNRKDTALIQMNTAQQAELVLQLLHSFPFKGHSIRVNLSKHKV 762
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIP------ASVTE 114
VQLP+ G+ + LTKD+T SP+HRFK PGSKN+QNI+PPS LHLSN+P + E
Sbjct: 763 VQLPRPGEDNGELTKDFTGSPMHRFKLPGSKNYQNIHPPSSFLHLSNLPDPNGGDMAEIE 822
Query: 115 DELKEAFTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
++K+ FT +G +K FKFF D KMAL+++ S+E+AI +L+ +H + +Q ++VSF+
Sbjct: 823 KKIKQLFTSQG-EIKSFKFFQNDMKMALIEMGSLEQAINSLVTLHGCSIGDQ-FVKVSFA 880
Query: 175 KSNIQDIRD 183
K + + +
Sbjct: 881 KPTTRKLNN 889
>TAIR|locus:2018630 [details] [associations]
symbol:PTB3 "polypyrimidine tract-binding protein 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006417 "regulation of translation" evidence=IEP] [GO:0043484
"regulation of RNA splicing" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006417 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0043484 GO:GO:0000932 EMBL:AC005687 KO:K14948
eggNOG:NOG263741 HOGENOM:HOG000231699 EMBL:BT014899 EMBL:BT015028
IPI:IPI00544143 RefSeq:NP_001077672.1 RefSeq:NP_175010.2
UniGene:At.22472 ProteinModelPortal:Q6ICX4 SMR:Q6ICX4 STRING:Q6ICX4
PaxDb:Q6ICX4 PRIDE:Q6ICX4 EnsemblPlants:AT1G43190.1
EnsemblPlants:AT1G43190.2 GeneID:840918 KEGG:ath:AT1G43190
GeneFarm:5076 TAIR:At1g43190 InParanoid:Q6ICX4 OMA:IKMHNHK
PhylomeDB:Q6ICX4 ProtClustDB:CLSN2690441 Genevestigator:Q6ICX4
GermOnline:AT1G43190 Uniprot:Q6ICX4
Length = 432
Score = 268 (99.4 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 63/175 (36%), Positives = 98/175 (56%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG+++R+K+L NK D AL+QM + QA LA+ + +FGK++ V SKH
Sbjct: 262 LFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPN 321
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEA 120
+ P + DY S L+RF + +KN++ P+ +HLS +P VTE+E+
Sbjct: 322 IT------PGTD-SHDYVNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNH 374
Query: 121 FTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSK 175
E G V F +K AL+Q ++ EEA AL+ H L S +R+SFS+
Sbjct: 375 VQEHGAVVNTKVFEMNGKKQALVQFENEEEAAEALVCKHATSLGG-SIIRISFSQ 428
>DICTYBASE|DDB_G0278105 [details] [associations]
symbol:DDB_G0278105 "heterogeneous nuclear
ribonucleoprotein L-like protein" species:44689 "Dictyostelium
discoideum" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0278105
GO:GO:0005634 GO:GO:0000166 EMBL:AAFI02000023 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG326285 KO:K13159
TIGRFAMs:TIGR01649 RefSeq:XP_642125.1 ProteinModelPortal:Q54YS7
EnsemblProtists:DDB0233648 GeneID:8621334 KEGG:ddi:DDB_G0278105
InParanoid:Q54YS7 OMA:VIRIVIF ProtClustDB:CLSZ2846835
Uniprot:Q54YS7
Length = 530
Score = 257 (95.5 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 64/185 (34%), Positives = 110/185 (59%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG+V+++K+L+N K SA++QM +S QA +A+ +++ V+G+++ V +K+Q
Sbjct: 338 LFNLFCLYGNVIKIKMLHNTKGSAMVQMGDSVQAEIAIQCLNQSSVYGQKIGVFHTKYQY 397
Query: 61 VQLPKEGQPDAGLTKDYTASPLHRF--KKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
+ ++ T+DY+ S L+RF +P KN Y PSPTLH N+P + TE +L
Sbjct: 398 IV-------ESEKTRDYSKSTLNRFLNNQPYGKN---AYKPSPTLHFLNVPLNFTEKQLI 447
Query: 119 EAFTEKG-FTVKGFKFFP----KDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSF 173
+ FT G T KFFP + M LL+ A AL+ ++NH+++ L++SF
Sbjct: 448 DEFTNFGTHTPTHCKFFPTKPESTKLMGLLEFPDSRLATEALMDLNNHKITGNV-LKLSF 506
Query: 174 SKSNI 178
+ + I
Sbjct: 507 TMNTI 511
>DICTYBASE|DDB_G0275365 [details] [associations]
symbol:DDB_G0275365 "Heterogeneous nuclear
ribonucleoprotein L" species:44689 "Dictyostelium discoideum"
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0275365 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AAFI02000013 eggNOG:NOG326285
TIGRFAMs:TIGR01649 RefSeq:XP_643683.1 ProteinModelPortal:Q553T2
EnsemblProtists:DDB0202577 GeneID:8619950 KEGG:ddi:DDB_G0275365
InParanoid:Q553T2 OMA:SITDSHN Uniprot:Q553T2
Length = 695
Score = 199 (75.1 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 47/136 (34%), Positives = 75/136 (55%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L VYG+V RVKIL +KK +AL+QM + QA + ++ +F +++ SKH
Sbjct: 389 IFNLFCVYGNVQRVKILSSKKGAALVQMEDVQQAEAVIRFYHQMPLFKDTLQINYSKH-- 446
Query: 61 VQLPKEGQPDAG-LTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKE 119
+ + P++ L+KD+ S L+RF P ++++Y PS TL+ SN+P TE +
Sbjct: 447 LSITDSHNPESPTLSKDFAQSNLNRFTHP-INTYKHLYKPSQTLYFSNVPKDFTETNFNQ 505
Query: 120 AFTEKGFTVK-GFKFF 134
F GFK F
Sbjct: 506 LFQSLNLQKPVGFKIF 521
Score = 89 (36.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 31/101 (30%), Positives = 49/101 (48%)
Query: 90 SKNFQNIYPPSPTLHLSNI--PAS--VTEDELKEAFTEKGFTVKGFKFFPKDRKMALLQL 145
S N N P + T+ LS I P S +T D L F+ G ++ F K+ AL++
Sbjct: 143 SPNTNNSAPIAGTVLLSTIENPGSNSITIDHLYHVFSSCGEVLR-IVMFNKNNLQALIEF 201
Query: 146 DSIEEAITALIQMHNHQLSE--QSHLRVSFSKSNIQDIRDN 184
++E A+ A + NH L Q L++ SK++ +I N
Sbjct: 202 STVESALHAKKTLSNHSLFHGGQCTLKLEVSKTDRLNITQN 242
Score = 70 (29.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 137 DRKMALLQLDSIEEAITALIQMHNHQLSEQSH--LRVSFSKSNI 178
D+ + LL+ S AI AL+ ++N L +H LR+SFS S +
Sbjct: 594 DKIVGLLEFSSPANAIDALVLLNNSVLPNSNHMGLRLSFSNSTV 637
Score = 65 (27.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 24/94 (25%), Positives = 42/94 (44%)
Query: 8 YGDVLRVKILYNKKDSALIQM--AESHQAHLAMMHMDKLRVFGKQMRVMISKHQAVQLPK 65
+G + V+IL + AL++M ES L + L + GK +++ SK Q++ P
Sbjct: 41 FGKCVSVRIL-ERFHQALLEMDSVESATRLLKYSQKNSLLLHGKPVQISFSKSQSINQPT 99
Query: 66 EGQP-DAGLTKDYTASPLHRFKKPGSKNFQNIYP 98
P + T + T+S + S + N P
Sbjct: 100 PQSPTNTTTTTNTTSSSSSSHRSSPSSSSYNGLP 133
>RGD|1359551 [details] [associations]
symbol:Fblim1 "filamin binding LIM protein 1" species:10116
"Rattus norvegicus" [GO:0001725 "stress fiber" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030054 "cell
junction" evidence=ISO] [GO:0031005 "filamin binding" evidence=ISO]
[GO:0033623 "regulation of integrin activation" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1359551
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0030529 TIGRFAMs:TIGR01649 HOGENOM:HOG000293298
OrthoDB:EOG4RFKSD UniGene:Rn.33873 IPI:IPI00364061 EMBL:BC086392
EMBL:AB260892 STRING:Q5U1Y5 UCSC:RGD:1359551 HOVERGEN:HBG058843
InParanoid:Q5U1Y5 Genevestigator:Q5U1Y5 Uniprot:Q5U1Y5
Length = 245
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 51/170 (30%), Positives = 90/170 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG++M V +SK A
Sbjct: 55 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPA 114
Query: 61 VQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
+ +P + G D + KD++ S +RF P I PS LH N P VTE+
Sbjct: 115 I-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENF 173
Query: 118 KEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
E E G +VK F + LL+ DS +A+ L ++++Q+
Sbjct: 174 FEICDELGVKRPTSVKVFSGKSERSSSGLLEWDSKSDALETLGFLNHYQM 223
>FB|FBgn0003435 [details] [associations]
symbol:sm "smooth" species:7227 "Drosophila melanogaster"
[GO:0030529 "ribonucleoprotein complex" evidence=NAS] [GO:0003729
"mRNA binding" evidence=ISS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0008343 "adult
feeding behavior" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 EMBL:AE013599 GO:GO:0007411
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0008343
KO:K13159 GeneTree:ENSGT00550000074508 UniGene:Dm.7773 GeneID:37254
KEGG:dme:Dmel_CG9218 CTD:37254 FlyBase:FBgn0003435 ChiTaRS:sm
GenomeRNAi:37254 NextBio:802755 EMBL:BT011352 RefSeq:NP_001027439.2
SMR:Q6NND8 STRING:Q6NND8 EnsemblMetazoa:FBtr0301609 Uniprot:Q6NND8
Length = 480
Score = 193 (73.0 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 49/168 (29%), Positives = 87/168 (51%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRV-FGKQMRVMISKHQ 59
+F+L +YG+V R+K L K+ +A++QM ++ + H++ + V G ++++ SK
Sbjct: 263 LFNLVCLYGNVARIKFLKTKEGTAMVQMGDAVAVERCVQHLNNIPVGTGGKIQIAFSKQN 322
Query: 60 AVQ--LPKEGQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDE 116
+ + PD + K+YT S +RF P + I PPS LH N P +TED+
Sbjct: 323 FLSEVINPFLLPDHSPSFKEYTGSKNNRFLSPAQASKNRIQPPSKILHFFNTPPGLTEDQ 382
Query: 117 LKEAFTEKGFTVKGFKFFP-KDRKMA--LLQLDSIEEAITALIQMHNH 161
L F K + FP K + + L++ +I +A+ A+++ NH
Sbjct: 383 LIGIFNIKDVPATSVRLFPLKTERSSSGLIEFSNISQAVLAIMKC-NH 429
>UNIPROTKB|K7EK45 [details] [associations]
symbol:PTBP1 "Polypyrimidine tract-binding protein 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 EMBL:AC006273 HGNC:HGNC:9583
Ensembl:ENST00000585956 Uniprot:K7EK45
Length = 256
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 34/58 (58%), Positives = 48/58 (82%)
Query: 13 RVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQAVQLPKEGQPD 70
RVKIL+NKK++AL+QMA+ +QA LAM H++ ++ GK +R+ +SKHQ VQLP+EGQ D
Sbjct: 199 RVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPREGQED 256
>UNIPROTKB|I3LPU8 [details] [associations]
symbol:HNRNPL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045120 "pronucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0044212 GO:GO:0045120 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 EMBL:FP565352
Ensembl:ENSSSCT00000031006 OMA:PNLSGQX Uniprot:I3LPU8
Length = 205
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/170 (28%), Positives = 90/170 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG+++ V +SK A
Sbjct: 15 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQPA 74
Query: 61 VQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
+ +P + G D + KD++ S +RF P I PS LH N P VTE+
Sbjct: 75 I-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENF 133
Query: 118 KEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
E E G +VK F + LL+ +S +A+ L ++++Q+
Sbjct: 134 FEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKSDALETLGFLNHYQM 183
>UNIPROTKB|B7WPG3 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AC011247 HGNC:HGNC:25127 HOVERGEN:HBG105786 TIGRFAMs:TIGR01649
HOGENOM:HOG000293298 IPI:IPI00745396 SMR:B7WPG3 STRING:B7WPG3
Ensembl:ENST00000378915 Uniprot:B7WPG3
Length = 508
Score = 190 (71.9 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 51/189 (26%), Positives = 101/189 (53%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V +SK +
Sbjct: 318 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHS 377
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 378 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 437
Query: 119 EAFTE-KGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALIQMHNHQL-----SEQSH 168
+ + + T +K F P + ++ LL+ + +A+ AL ++++Q+ S
Sbjct: 438 KLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPNGSNPYT 497
Query: 169 LRVSFSKSN 177
L++ FS S+
Sbjct: 498 LKLCFSTSS 506
>UNIPROTKB|Q5JB52 [details] [associations]
symbol:HNRPLL "Stromal RNA regulating factor" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC011247
UniGene:Hs.445497 HGNC:HGNC:25127 HOVERGEN:HBG105786
TIGRFAMs:TIGR01649 HOGENOM:HOG000293298 IPI:IPI00745396
EMBL:AY236962 SMR:Q5JB52 STRING:Q5JB52 Ensembl:ENST00000409328
Uniprot:Q5JB52
Length = 508
Score = 190 (71.9 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 51/189 (26%), Positives = 101/189 (53%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V +SK +
Sbjct: 318 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHS 377
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 378 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 437
Query: 119 EAFTE-KGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALIQMHNHQL-----SEQSH 168
+ + + T +K F P + ++ LL+ + +A+ AL ++++Q+ S
Sbjct: 438 KLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPNGSNPYT 497
Query: 169 LRVSFSKSN 177
L++ FS S+
Sbjct: 498 LKLCFSTSS 506
>MGI|MGI:104816 [details] [associations]
symbol:Hnrnpl "heterogeneous nuclear ribonucleoprotein L"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISO] [GO:0045120 "pronucleus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 MGI:MGI:104816 GO:GO:0005737
GO:GO:0005654 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0044212 GO:GO:0030529 GO:GO:0045120
eggNOG:NOG326285 HOVERGEN:HBG105786 KO:K13159 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 HOGENOM:HOG000293298 CTD:3191
OrthoDB:EOG4RFKSD ChiTaRS:HNRNPL EMBL:BC027206 EMBL:BC030461
EMBL:BC099683 EMBL:AB009392 IPI:IPI00620362 RefSeq:NP_796275.3
UniGene:Mm.9043 PDB:3S01 PDB:3TYT PDBsum:3S01 PDBsum:3TYT
ProteinModelPortal:Q8R081 SMR:Q8R081 IntAct:Q8R081 STRING:Q8R081
PhosphoSite:Q8R081 REPRODUCTION-2DPAGE:Q8R081 PaxDb:Q8R081
PRIDE:Q8R081 Ensembl:ENSMUST00000038572 Ensembl:ENSMUST00000174548
GeneID:15388 KEGG:mmu:15388 UCSC:uc009fzz.2 NextBio:288066
Bgee:Q8R081 CleanEx:MM_HNRNPL Genevestigator:Q8R081
GermOnline:ENSMUSG00000015165 Uniprot:Q8R081
Length = 586
Score = 191 (72.3 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 51/170 (30%), Positives = 90/170 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG++M V +SK A
Sbjct: 396 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPA 455
Query: 61 VQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
+ +P + G D + KD++ S +RF P I PS LH N P VTE+
Sbjct: 456 I-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENF 514
Query: 118 KEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
E E G +VK F + LL+ DS +A+ L ++++Q+
Sbjct: 515 FEICDELGVKRPTSVKVFSGKSERSSSGLLEWDSKSDALETLGFLNHYQM 564
>UNIPROTKB|F2Z3R2 [details] [associations]
symbol:Hnrnpl "Protein Hnrnpl" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:71059 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 KO:K13159
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 CTD:3191
UniGene:Rn.33873 GeneID:80846 KEGG:rno:80846 NextBio:614884
IPI:IPI00364061 RefSeq:NP_116008.2 ProteinModelPortal:F2Z3R2
SMR:F2Z3R2 PRIDE:F2Z3R2 Ensembl:ENSRNOT00000027494 Uniprot:F2Z3R2
Length = 586
Score = 191 (72.3 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 51/170 (30%), Positives = 90/170 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG++M V +SK A
Sbjct: 396 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPA 455
Query: 61 VQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
+ +P + G D + KD++ S +RF P I PS LH N P VTE+
Sbjct: 456 I-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENF 514
Query: 118 KEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
E E G +VK F + LL+ DS +A+ L ++++Q+
Sbjct: 515 FEICDELGVKRPTSVKVFSGKSERSSSGLLEWDSKSDALETLGFLNHYQM 564
>UNIPROTKB|F1LQ48 [details] [associations]
symbol:Hnrnpl "Protein Hnrnpl" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:71059 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:RPTSVKV IPI:IPI00201964
Ensembl:ENSRNOT00000027425 ArrayExpress:F1LQ48 Uniprot:F1LQ48
Length = 595
Score = 191 (72.3 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 51/170 (30%), Positives = 90/170 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG++M V +SK A
Sbjct: 405 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPA 464
Query: 61 VQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
+ +P + G D + KD++ S +RF P I PS LH N P VTE+
Sbjct: 465 I-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENF 523
Query: 118 KEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
E E G +VK F + LL+ DS +A+ L ++++Q+
Sbjct: 524 FEICDELGVKRPTSVKVFSGKSERSSSGLLEWDSKSDALETLGFLNHYQM 573
>UNIPROTKB|F1N7G0 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033120 "positive regulation of RNA splicing"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0033120 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:QIRIPNG EMBL:DAAA02030598
IPI:IPI00709568 Ensembl:ENSBTAT00000027405 Uniprot:F1N7G0
Length = 541
Score = 190 (71.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 51/189 (26%), Positives = 101/189 (53%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V +SK +
Sbjct: 351 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHS 410
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 411 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 470
Query: 119 EAFTE-KGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALIQMHNHQL-----SEQSH 168
+ + + T +K F P + ++ LL+ + +A+ AL ++++Q+ S
Sbjct: 471 KLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPNGSNPYT 530
Query: 169 LRVSFSKSN 177
L++ FS S+
Sbjct: 531 LKLCFSTSS 539
>UNIPROTKB|D6W592 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 EMBL:CH471053
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0030529 EMBL:AC011247 IPI:IPI00103247 UniGene:Hs.445497
HGNC:HGNC:25127 TIGRFAMs:TIGR01649 OMA:QIRIPNG
ProteinModelPortal:D6W592 SMR:D6W592 PRIDE:D6W592
Ensembl:ENST00000449105 PhylomeDB:D6W592 ArrayExpress:D6W592
Bgee:D6W592 Uniprot:D6W592
Length = 542
Score = 190 (71.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 51/189 (26%), Positives = 101/189 (53%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V +SK +
Sbjct: 352 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHS 411
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 412 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 471
Query: 119 EAFTE-KGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALIQMHNHQL-----SEQSH 168
+ + + T +K F P + ++ LL+ + +A+ AL ++++Q+ S
Sbjct: 472 KLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPNGSNPYT 531
Query: 169 LRVSFSKSN 177
L++ FS S+
Sbjct: 532 LKLCFSTSS 540
>UNIPROTKB|Q8WVV9 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0033120 "positive
regulation of RNA splicing" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0030529
GO:GO:0033120 EMBL:AY236963 EMBL:AF461722 EMBL:AF461712
EMBL:AF461713 EMBL:AF461715 EMBL:AF461717 EMBL:AF461719
EMBL:AF461721 EMBL:AF461720 EMBL:AF461718 EMBL:AF461716
EMBL:AF461714 EMBL:AK291462 EMBL:AC011247 EMBL:BC008217
EMBL:BC017480 EMBL:AL512692 IPI:IPI00103247 IPI:IPI00470410
IPI:IPI00479814 IPI:IPI00554613 RefSeq:NP_001136122.1
RefSeq:NP_612403.2 UniGene:Hs.445497 ProteinModelPortal:Q8WVV9
SMR:Q8WVV9 IntAct:Q8WVV9 MINT:MINT-1033123 STRING:Q8WVV9
PhosphoSite:Q8WVV9 DMDM:62286941 PaxDb:Q8WVV9 PRIDE:Q8WVV9
Ensembl:ENST00000409636 Ensembl:ENST00000410076 GeneID:92906
KEGG:hsa:92906 UCSC:uc021vgb.1 UCSC:uc021vgc.1 CTD:92906
GeneCards:GC02M038789 HGNC:HGNC:25127 HPA:HPA046084 MIM:611208
neXtProt:NX_Q8WVV9 PharmGKB:PA134987080 eggNOG:NOG326285
HOVERGEN:HBG105786 InParanoid:Q8WVV9 KO:K13159 OrthoDB:EOG49S662
GenomeRNAi:92906 NextBio:77908 ArrayExpress:Q8WVV9 Bgee:Q8WVV9
CleanEx:HS_HNRPLL Genevestigator:Q8WVV9 GermOnline:ENSG00000143889
TIGRFAMs:TIGR01649 Uniprot:Q8WVV9
Length = 542
Score = 190 (71.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 51/189 (26%), Positives = 101/189 (53%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V +SK +
Sbjct: 352 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHS 411
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 412 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 471
Query: 119 EAFTE-KGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALIQMHNHQL-----SEQSH 168
+ + + T +K F P + ++ LL+ + +A+ AL ++++Q+ S
Sbjct: 472 KLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPNGSNPYT 531
Query: 169 LRVSFSKSN 177
L++ FS S+
Sbjct: 532 LKLCFSTSS 540
>UNIPROTKB|F1LPP9 [details] [associations]
symbol:Hnrnpl "Protein Hnrnpl" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 RGD:71059 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 KO:K13159
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 CTD:3191
IPI:IPI00765134 RefSeq:NP_001128232.1 UniGene:Rn.33873 PRIDE:F1LPP9
Ensembl:ENSRNOT00000057034 GeneID:80846 KEGG:rno:80846
NextBio:614884 ArrayExpress:F1LPP9 Uniprot:F1LPP9
Length = 623
Score = 191 (72.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 51/170 (30%), Positives = 90/170 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG++M V +SK A
Sbjct: 433 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPA 492
Query: 61 VQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
+ +P + G D + KD++ S +RF P I PS LH N P VTE+
Sbjct: 493 I-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENF 551
Query: 118 KEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
E E G +VK F + LL+ DS +A+ L ++++Q+
Sbjct: 552 FEICDELGVKRPTSVKVFSGKSERSSSGLLEWDSKSDALETLGFLNHYQM 601
>UNIPROTKB|J9P3Y8 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:QIRIPNG EMBL:AAEX03010867
Ensembl:ENSCAFT00000049490 Uniprot:J9P3Y8
Length = 545
Score = 190 (71.9 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 51/189 (26%), Positives = 101/189 (53%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V +SK +
Sbjct: 355 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHS 414
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 415 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 474
Query: 119 EAFTE-KGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALIQMHNHQL-----SEQSH 168
+ + + T +K F P + ++ LL+ + +A+ AL ++++Q+ S
Sbjct: 475 KLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPNGSNPYT 534
Query: 169 LRVSFSKSN 177
L++ FS S+
Sbjct: 535 LKLCFSTSS 543
>UNIPROTKB|F1P0T4 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0033120
"positive regulation of RNA splicing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0033120
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508 OMA:QIRIPNG
EMBL:AADN02041246 EMBL:AADN02041247 EMBL:AADN02041248
IPI:IPI00579162 Ensembl:ENSGALT00000013852 Uniprot:F1P0T4
Length = 473
Score = 185 (70.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 51/189 (26%), Positives = 101/189 (53%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V +SK +
Sbjct: 283 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHS 342
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDE-L 117
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+ +
Sbjct: 343 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFV 402
Query: 118 KEAFTEKGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALIQMHNHQL-----SEQSH 168
K + + +K F P + ++ LL+ + +A+ AL ++++Q+ S
Sbjct: 403 KLCEDHEVLSFIKYKVFDPKPSAKTLSGLLEWECKTDAVEALTVLNHYQIRVPNGSNPYT 462
Query: 169 LRVSFSKSN 177
L++ FS S+
Sbjct: 463 LKLCFSTSS 471
>UNIPROTKB|I3L8B8 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
Ensembl:ENSSSCT00000030162 Uniprot:I3L8B8
Length = 488
Score = 184 (69.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 51/189 (26%), Positives = 100/189 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V SK +
Sbjct: 298 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVWCSKQLS 357
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 358 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 417
Query: 119 EAFTE-KGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALIQMHNHQL-----SEQSH 168
+ + + T +K F P + ++ LL+ + +A+ AL ++++Q+ S
Sbjct: 418 KLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPNGSNPYT 477
Query: 169 LRVSFSKSN 177
L++ FS S+
Sbjct: 478 LKLCFSTSS 486
>UNIPROTKB|I3LG16 [details] [associations]
symbol:HNRPLL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033120 "positive regulation of RNA splicing"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0033120 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 OMA:QIRIPNG Ensembl:ENSSSCT00000024049
Uniprot:I3LG16
Length = 537
Score = 184 (69.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 51/189 (26%), Positives = 100/189 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V SK +
Sbjct: 347 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVWCSKQLS 406
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 407 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 466
Query: 119 EAFTE-KGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALIQMHNHQL-----SEQSH 168
+ + + T +K F P + ++ LL+ + +A+ AL ++++Q+ S
Sbjct: 467 KLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALTALNHYQIRVPNGSNPYT 526
Query: 169 LRVSFSKSN 177
L++ FS S+
Sbjct: 527 LKLCFSTSS 535
>UNIPROTKB|E1BIB4 [details] [associations]
symbol:HNRNPL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045120 "pronucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0044212 GO:GO:0045120 KO:K13159 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 CTD:3191 OMA:RPTSVKV EMBL:DAAA02047038
IPI:IPI00697891 RefSeq:NP_001178959.1 UniGene:Bt.21801 PRIDE:E1BIB4
Ensembl:ENSBTAT00000032051 GeneID:504520 KEGG:bta:504520
NextBio:20866705 Uniprot:E1BIB4
Length = 588
Score = 184 (69.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 49/170 (28%), Positives = 90/170 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG+++ V +SK A
Sbjct: 398 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQPA 457
Query: 61 VQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
+ +P + G D + KD++ S +RF P I PS LH N P VTE+
Sbjct: 458 I-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENF 516
Query: 118 KEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
E E G +VK F + LL+ +S +A+ L ++++Q+
Sbjct: 517 FEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKSDALETLGFLNHYQM 566
>UNIPROTKB|E2R944 [details] [associations]
symbol:HNRNPL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045120 "pronucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0044212
GO:GO:0045120 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
OMA:RPTSVKV EMBL:AAEX03000969 Ensembl:ENSCAFT00000009103
Uniprot:E2R944
Length = 588
Score = 184 (69.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 49/170 (28%), Positives = 90/170 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG+++ V +SK A
Sbjct: 398 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQPA 457
Query: 61 VQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
+ +P + G D + KD++ S +RF P I PS LH N P VTE+
Sbjct: 458 I-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENF 516
Query: 118 KEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
E E G +VK F + LL+ +S +A+ L ++++Q+
Sbjct: 517 FEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKSDALETLGFLNHYQM 566
>UNIPROTKB|P14866 [details] [associations]
symbol:HNRNPL "Heterogeneous nuclear ribonucleoprotein L"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0000166 Reactome:REACT_1675
Gene3D:3.30.70.330 EMBL:CH471126 GO:GO:0003723 GO:GO:0044212
GO:GO:0030529 GO:GO:0000398 GO:GO:0045120 eggNOG:NOG326285
HOVERGEN:HBG105786 KO:K13159 TIGRFAMs:TIGR01649
HOGENOM:HOG000293298 EMBL:AB044547 EMBL:AK292115 EMBL:AC008982
EMBL:X16135 IPI:IPI00027834 PIR:A33616 RefSeq:NP_001005335.1
RefSeq:NP_001524.2 UniGene:Hs.644906 PDB:3R27 PDB:3TO8 PDBsum:3R27
PDBsum:3TO8 ProteinModelPortal:P14866 SMR:P14866 IntAct:P14866
MINT:MINT-1422378 STRING:P14866 PhosphoSite:P14866 DMDM:215274006
REPRODUCTION-2DPAGE:IPI00027834 SWISS-2DPAGE:P14866 PaxDb:P14866
PRIDE:P14866 DNASU:3191 Ensembl:ENST00000221419
Ensembl:ENST00000388749 Ensembl:ENST00000388750 GeneID:3191
KEGG:hsa:3191 UCSC:uc021uuh.1 CTD:3191 GeneCards:GC19M039327
H-InvDB:HIX0174642 HGNC:HGNC:5045 HPA:CAB016326 MIM:164021
MIM:603083 neXtProt:NX_P14866 PharmGKB:PA162391389
InParanoid:P14866 OMA:RPTSVKV OrthoDB:EOG4RFKSD ChiTaRS:HNRNPL
GenomeRNAi:3191 NextBio:12694 ArrayExpress:P14866 Bgee:P14866
CleanEx:HS_HNRNPL Genevestigator:P14866 GermOnline:ENSG00000104824
Uniprot:P14866
Length = 589
Score = 184 (69.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 49/170 (28%), Positives = 90/170 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG+++ V +SK A
Sbjct: 399 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQPA 458
Query: 61 VQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
+ +P + G D + KD++ S +RF P I PS LH N P VTE+
Sbjct: 459 I-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENF 517
Query: 118 KEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
E E G +VK F + LL+ +S +A+ L ++++Q+
Sbjct: 518 FEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKSDALETLGFLNHYQM 567
>MGI|MGI:1919942 [details] [associations]
symbol:Hnrpll "heterogeneous nuclear ribonucleoprotein
L-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0033120 "positive
regulation of RNA splicing" evidence=ISO] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1919942 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0033120
CTD:92906 eggNOG:NOG326285 HOVERGEN:HBG105786 KO:K13159
OrthoDB:EOG49S662 TIGRFAMs:TIGR01649 EMBL:AK034860 EMBL:AK146879
EMBL:BC004763 EMBL:BC012849 EMBL:BC071184 IPI:IPI00121760
IPI:IPI00463538 IPI:IPI00555009 RefSeq:NP_659051.3 UniGene:Mm.64579
PDB:1WEX PDB:2E5I PDBsum:1WEX PDBsum:2E5I ProteinModelPortal:Q921F4
SMR:Q921F4 STRING:Q921F4 PhosphoSite:Q921F4 PaxDb:Q921F4
PRIDE:Q921F4 Ensembl:ENSMUST00000061331 GeneID:72692 KEGG:mmu:72692
UCSC:uc008dqk.1 GeneTree:ENSGT00550000074508 HOGENOM:HOG000293298
InParanoid:Q921F4 OMA:QIRIPNG EvolutionaryTrace:Q921F4
NextBio:336749 Bgee:Q921F4 CleanEx:MM_HNRPLL Genevestigator:Q921F4
GermOnline:ENSMUSG00000024095 Uniprot:Q921F4
Length = 591
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 50/190 (26%), Positives = 96/190 (50%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V +SK +
Sbjct: 401 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHS 460
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 461 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 520
Query: 119 EAFTEKGFT--VKGFKFFPKDRKM----ALLQLDSIEEAITALIQMHNHQL-----SEQS 167
+ + +K +K F LL+ +A+ AL ++++Q+ S
Sbjct: 521 KLCNDHEVLPFIK-YKVFDAKASAKTLSGLLEWKCKTDAVEALTALNHYQIRVPNGSNPY 579
Query: 168 HLRVSFSKSN 177
L++ FS S+
Sbjct: 580 TLKLCFSTSS 589
>RGD|1305861 [details] [associations]
symbol:Hnrpll "heterogeneous nuclear ribonucleoprotein L-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0033120 "positive regulation of RNA splicing"
evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 RGD:1305861
GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0033120 CTD:92906 KO:K13159
OrthoDB:EOG49S662 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
IPI:IPI00360055 RefSeq:XP_001063027.2 RefSeq:XP_233805.5
PRIDE:D4A3E1 Ensembl:ENSRNOT00000009175 GeneID:313842
KEGG:rno:313842 UCSC:RGD:1305861 NextBio:666896 Uniprot:D4A3E1
Length = 591
Score = 175 (66.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 50/190 (26%), Positives = 96/190 (50%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG++ +VK + +AL++M + + A+ H++ +++FGK++ V +SK +
Sbjct: 401 VFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKRLNVCVSKQHS 460
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELK 118
V + + + G + KD+ S +RF G + I PPS LH N+P VTE+
Sbjct: 461 VVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYYNVPLCVTEETFT 520
Query: 119 EAFTEKGFT--VKGFKFFPKDRKM----ALLQLDSIEEAITALIQMHNHQL-----SEQS 167
+ + +K +K F LL+ +A+ AL ++++Q+ S
Sbjct: 521 KLCNDHEVLPFIK-YKVFDAKASAKTLSGLLEWKCKTDAVEALTALNHYQIRVPNGSNPY 579
Query: 168 HLRVSFSKSN 177
L++ FS S+
Sbjct: 580 TLKLCFSTSS 589
>GENEDB_PFALCIPARUM|PFF0320c [details] [associations]
symbol:PFF0320c "polypyrimidine tract binding
protein, putative" species:5833 "Plasmodium falciparum" [GO:0008187
"poly-pyrimidine tract binding" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0008380 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:AL844505 GO:GO:0008187 RefSeq:XP_966055.1
ProteinModelPortal:C6KSR3 EnsemblProtists:PFF0320c:mRNA
GeneID:3885785 KEGG:pfa:PFF0320c EuPathDB:PlasmoDB:PF3D7_0606500
HOGENOM:HOG000281449 OMA:DATENEI ProtClustDB:CLSZ2432274
Uniprot:C6KSR3
Length = 663
Score = 172 (65.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 49/183 (26%), Positives = 96/183 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG V R+KIL K D+ALIQ + + LA ++ + R+ + + V SK
Sbjct: 482 LFNLFSIYGFVTRIKILREKPDAALIQYSNYIFSSLAQEYLQRARISNQSIEVNFSKIHD 541
Query: 61 VQLPKEGQP-DAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKE 119
+++ + Q ++ TK ++ K + P+ L +SN+ +V ED +
Sbjct: 542 IRVSQRQQNNESHNTKIFSNYDQRYVLSDQGKYIKAACRPTKCLFISNLNENVNEDCVMN 601
Query: 120 AFTEKGFTVKGFKFFP-KDRKMAL---LQLDSIEEAITALIQMHNHQLSEQSHLRVSFSK 175
F + G + +F P K+ K L +++++ + A AL+ +HN L ++ +++VS++K
Sbjct: 602 LFNKYG-NINKLQFLPVKEGKRHLSIIVEMNTEDMATKALMDLHNFYLKDR-YIKVSYTK 659
Query: 176 SNI 178
S +
Sbjct: 660 SRL 662
>UNIPROTKB|C6KSR3 [details] [associations]
symbol:PFF0320c "Polypyrimidine tract binding protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0008187
"poly-pyrimidine tract binding" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0008380 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:AL844505 GO:GO:0008187 RefSeq:XP_966055.1
ProteinModelPortal:C6KSR3 EnsemblProtists:PFF0320c:mRNA
GeneID:3885785 KEGG:pfa:PFF0320c EuPathDB:PlasmoDB:PF3D7_0606500
HOGENOM:HOG000281449 OMA:DATENEI ProtClustDB:CLSZ2432274
Uniprot:C6KSR3
Length = 663
Score = 172 (65.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 49/183 (26%), Positives = 96/183 (52%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F+L +YG V R+KIL K D+ALIQ + + LA ++ + R+ + + V SK
Sbjct: 482 LFNLFSIYGFVTRIKILREKPDAALIQYSNYIFSSLAQEYLQRARISNQSIEVNFSKIHD 541
Query: 61 VQLPKEGQP-DAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKE 119
+++ + Q ++ TK ++ K + P+ L +SN+ +V ED +
Sbjct: 542 IRVSQRQQNNESHNTKIFSNYDQRYVLSDQGKYIKAACRPTKCLFISNLNENVNEDCVMN 601
Query: 120 AFTEKGFTVKGFKFFP-KDRKMAL---LQLDSIEEAITALIQMHNHQLSEQSHLRVSFSK 175
F + G + +F P K+ K L +++++ + A AL+ +HN L ++ +++VS++K
Sbjct: 602 LFNKYG-NINKLQFLPVKEGKRHLSIIVEMNTEDMATKALMDLHNFYLKDR-YIKVSYTK 659
Query: 176 SNI 178
S +
Sbjct: 660 SRL 662
>ZFIN|ZDB-GENE-040426-710 [details] [associations]
symbol:hnrpl "heterogeneous nuclear
ribonucleoprotein L" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-710 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:BX547938 HOVERGEN:HBG105786
KO:K13159 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOGENOM:HOG000293298 OMA:RPTSVKV OrthoDB:EOG4RFKSD EMBL:BC045336
IPI:IPI00502192 RefSeq:NP_957393.1 UniGene:Dr.76170 SMR:Q7ZW09
STRING:Q7ZW09 Ensembl:ENSDART00000051184 GeneID:394074
KEGG:dre:394074 CTD:394074 InParanoid:Q7ZW09 NextBio:20815031
Uniprot:Q7ZW09
Length = 536
Score = 170 (64.9 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 49/175 (28%), Positives = 90/175 (51%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V RVK + +K +A+++M + + A+ H++ +FG+++ V +SK QA
Sbjct: 346 VFNIFCLYGNVERVKFMKSKPGAAMVEMGDCYAVDRAVSHLNNTMLFGQKLNVCVSKQQA 405
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRF--KKPGSKNFQNIYPPSPTLHLSNIPASVTEDE 116
+ + Q + G KD+ +RF + +KN I PS LH N + +
Sbjct: 406 IMPGQSYQLEDGSCSFKDFHGYRNNRFTTSEQAAKN--RIQQPSNVLHFFNSQPDSSVEA 463
Query: 117 LKEAFTEKGF-TVKGFKFFPK--DRKMA-LLQLDSIEEAITALIQMHNHQLSEQS 167
E E G + K F DR + LL+ +S+ +A+ AL M+++Q+ S
Sbjct: 464 FSEICEELGIKSPVSVKLFTGKVDRSSSGLLEWESVNDAMEALALMNHYQMKNPS 518
>ZFIN|ZDB-GENE-040426-2707 [details] [associations]
symbol:hnrnpl2 "heterogeneous nuclear
ribonucleoprotein L2" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000504 InterPro:IPR006536
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2707 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG326285
HOVERGEN:HBG105786 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOGENOM:HOG000293298 EMBL:BX088654 EMBL:BC154328 IPI:IPI00617335
UniGene:Dr.32199 SMR:A8KC22 STRING:A8KC22
Ensembl:ENSDART00000142334 Uniprot:A8KC22
Length = 522
Score = 168 (64.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 48/174 (27%), Positives = 88/174 (50%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V RVK + +K +A+++M + + A+ H++ +F +++ + +SK QA
Sbjct: 329 VFNIFCLYGNVERVKFMKSKPGAAMVEMGDCYAVDRAISHLNNNFLFNQKLNLCVSKQQA 388
Query: 61 VQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSN-IPASVTE--- 114
+ + + D G KDY S +RF P I PS LH N +P + E
Sbjct: 389 IMPGQSYELDDGTNSFKDYHGSRNNRFATPEQAAKNRIQHPSNVLHFFNAVPEATPEMFT 448
Query: 115 ---DE--LKEAFTEKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
+E +K K F KG P LL+ +S+ +A+ AL ++++Q+
Sbjct: 449 RLCEEHGVKNPSNIKIFVAKGNS--PDRSSSGLLEWESVNDAMEALAMINHNQM 500
>UNIPROTKB|F1LZ79 [details] [associations]
symbol:F1LZ79 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
IPI:IPI00561021 Ensembl:ENSRNOT00000006719 ArrayExpress:F1LZ79
Uniprot:F1LZ79
Length = 485
Score = 139 (54.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 49/171 (28%), Positives = 84/171 (49%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG++M V +SK A
Sbjct: 296 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPA 355
Query: 61 VQLPKE--GQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHL-SNIPA--SVTED 115
+ +P + G + K ++ S R P +I PS LH S+ P SV
Sbjct: 356 I-MPGQSYGLERSCSYKHFSESRNSRLSTPEQAAKNHIQHPSNVLHFFSSHPGGDSVEFF 414
Query: 116 ELKEAFTEKGFT-VKGFKFFPKDRKMALLQLDSIEEAITAL-IQMHNHQLS 164
E+ + K T VK F + LL+ DS +A+ L H H S
Sbjct: 415 EICDELEVKHPTSVKVFSGKREHSSSGLLEWDSKSDALETLGFLNHYHMKS 465
>UNIPROTKB|F1M040 [details] [associations]
symbol:F1M040 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR000504 InterPro:IPR006536 InterPro:IPR012677
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01649
GeneTree:ENSGT00550000074508 IPI:IPI00952207
Ensembl:ENSRNOT00000006710 ArrayExpress:F1M040 Uniprot:F1M040
Length = 488
Score = 136 (52.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 47/170 (27%), Positives = 84/170 (49%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ +YG+V +VK + +K +A+++MA+ + A+ H++ +FG++M V +SK A
Sbjct: 300 VFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPA 359
Query: 61 VQLPKE--GQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHL-SNIPASVTED-E 116
+ +P + G + K ++ S R P +I PS LH S+ P ++ E
Sbjct: 360 I-MPGQSYGLERSCSYKHFSESRNSRLSTPEQAAKNHIQHPSNVLHFFSSHPGGDSKFFE 418
Query: 117 LKEAFTEKGFT-VKGFKFFPKDRKMALLQLDSIEEAITAL-IQMHNHQLS 164
+ + K T VK F + LL+ DS +A+ L H H S
Sbjct: 419 ICDELEVKHPTSVKVFSGKREHSSSGLLEWDSKSDALETLGFLNHYHMKS 468
>UNIPROTKB|H7C464 [details] [associations]
symbol:HNRPLL "Heterogeneous nuclear ribonucleoprotein
L-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR012677 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:AC011247 HGNC:HGNC:25127
ProteinModelPortal:H7C464 Ensembl:ENST00000441689 Uniprot:H7C464
Length = 133
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 44 LRVFGKQMRVMISKHQAVQLPKEGQPDAGLT--KDYTASPLHRFKKPGSKNFQNIYPPSP 101
+++FGK++ V +SK +V + + + G + KD+ S +RF G + I PPS
Sbjct: 2 VKLFGKRLNVCVSKQHSVVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSC 61
Query: 102 TLHLSNIPASVTEDELKEAFTE-KGFTVKGFKFF---PKDRKMA-LLQLDSIEEAITALI 156
LH N+P VTE+ + + + T +K F P + ++ LL+ + +A+ AL
Sbjct: 62 VLHYYNVPLCVTEETFTKLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTDAVEALT 121
Query: 157 QMHNHQL 163
++++Q+
Sbjct: 122 ALNHYQI 128
>RGD|71059 [details] [associations]
symbol:Hnrnpl "heterogeneous nuclear ribonucleoprotein L"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045120 "pronucleus" evidence=ISO]
InterPro:IPR012677 RGD:71059 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0030529 UniGene:Rn.33873 IPI:IPI00364061
HOVERGEN:HBG058843 EMBL:AF260436 IntAct:Q9ET33 STRING:Q9ET33
PRIDE:Q9ET33 UCSC:RGD:71059 InParanoid:Q9ET33 ArrayExpress:Q9ET33
Genevestigator:Q9ET33 Uniprot:Q9ET33
Length = 140
Score = 106 (42.4 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 53 VMISKHQAVQLPKE--GQPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIP 109
V +SK A+ +P + G D + KD++ S +RF P I PS LH N P
Sbjct: 2 VCVSKQPAI-MPGQSYGLEDGSCSYKDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAP 60
Query: 110 ASVTEDELKEAFTEKGF----TVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL 163
VTE+ E E G +VK F + LL+ DS +A+ L ++++Q+
Sbjct: 61 LEVTEENFFEICDELGVKRPTSVKVFSGKSERSSSGLLEWDSKSDALETLGFLNHYQM 118
>UNIPROTKB|A8YXY5 [details] [associations]
symbol:PTBP1 "PTBP1 protein" species:9913 "Bos taurus"
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
UniGene:Bt.9031 HOVERGEN:HBG069548 EMBL:DAAA02020232 EMBL:BC103383
IPI:IPI00968681 SMR:A8YXY5 Ensembl:ENSBTAT00000066124
Uniprot:A8YXY5
Length = 446
Score = 121 (47.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHL 36
+F L GVYGDV RVK+L+NKK++AL+QMA+ QA L
Sbjct: 380 LFILFGVYGDVQRVKVLFNKKENALVQMADGSQAQL 415
>WB|WBGene00016624 [details] [associations]
symbol:C44B7.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR006536 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:FO080141 eggNOG:NOG326285 KO:K13159
TIGRFAMs:TIGR01649 GeneTree:ENSGT00550000074508
HOGENOM:HOG000293298 OMA:RPTSVKV RefSeq:NP_495411.2
ProteinModelPortal:Q95QR5 SMR:Q95QR5 STRING:Q95QR5 PaxDb:Q95QR5
PRIDE:Q95QR5 EnsemblMetazoa:C44B7.2a.1 EnsemblMetazoa:C44B7.2a.2
EnsemblMetazoa:C44B7.2a.3 GeneID:3565706 KEGG:cel:CELE_C44B7.2
UCSC:C44B7.2a.1 CTD:3565706 WormBase:C44B7.2a InParanoid:Q95QR5
NextBio:957535 ArrayExpress:Q95QR5 Uniprot:Q95QR5
Length = 597
Score = 120 (47.3 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 42/169 (24%), Positives = 76/169 (44%)
Query: 1 MFSLTGVYGDVLRVKILYNKKDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQA 60
+F++ YG+VLR+ + K ++ +I++ + + + +FG + S +
Sbjct: 325 LFNILCQYGNVLRISFMRTKTETGIIELGTPEERQNVLDFLQGSALFGLTLEFKPSHQEC 384
Query: 61 VQLPKEG--QPDAGLT-KDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDEL 117
V ++ PD + KDY++S RF P I P+ TLH N P ++ E L
Sbjct: 385 VHHLRDPFLLPDGSPSFKDYSSSRNQRFSTPELAAKNRIIFPTNTLHWFNAPGTMDEQAL 444
Query: 118 KEAFTEKGF--TVKGFKFFPK--DRKMA-LLQLDSIEEAITALIQMHNH 161
+ EK VK FP +R A + +++E A ++ + NH
Sbjct: 445 LDLMAEKTEHKPVK-IDIFPSRNERSAAGTAEFETVEIA-NEVLALVNH 491
>UNIPROTKB|F1Q0F6 [details] [associations]
symbol:F1Q0F6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 EMBL:AAEX03010245
ProteinModelPortal:F1Q0F6 Ensembl:ENSCAFT00000005152 OMA:LEFEMES
Uniprot:F1Q0F6
Length = 470
Score = 116 (45.9 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 63 LPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT 122
+P GQ + +D T L F+KPG K F L + N+P +TE+E+++ F
Sbjct: 40 IPANGQQASSQNEDLTID-LKSFRKPGEKTFTQ----RSRLFVGNLPPDITEEEMRKLFE 94
Query: 123 EKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
+ G G F KD+ ++L++ A A +++ N L + LRV F+
Sbjct: 95 KYGKA--GEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ-LRVRFA 143
>UNIPROTKB|C9IZL7 [details] [associations]
symbol:NONO "Non-POU domain-containing octamer-binding
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AL590762 HGNC:HGNC:7871 HOGENOM:HOG000231095
IPI:IPI00645966 ProteinModelPortal:C9IZL7 SMR:C9IZL7 STRING:C9IZL7
PRIDE:C9IZL7 Ensembl:ENST00000454976 ArrayExpress:C9IZL7
Bgee:C9IZL7 Uniprot:C9IZL7
Length = 207
Score = 110 (43.8 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 63 LPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT 122
+P GQ + + T L F+KPG K F L + N+P +TE+E+++ F
Sbjct: 41 IPANGQQASSQNEGLTID-LKNFRKPGEKTFTQ----RSRLFVGNLPPDITEEEMRKLFE 95
Query: 123 EKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
+ G G F KD+ ++L++ A A +++ N L + LRV F+
Sbjct: 96 KYGKA--GEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ-LRVRFA 144
>UNIPROTKB|C9JYS8 [details] [associations]
symbol:NONO "Non-POU domain-containing octamer-binding
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR012975 Pfam:PF08075 EMBL:AL590762
HGNC:HGNC:7871 HOGENOM:HOG000231095 IPI:IPI00645010
ProteinModelPortal:C9JYS8 SMR:C9JYS8 STRING:C9JYS8 PRIDE:C9JYS8
Ensembl:ENST00000413858 ArrayExpress:C9JYS8 Bgee:C9JYS8
Uniprot:C9JYS8
Length = 248
Score = 110 (43.8 bits), Expect = 0.00016, P = 0.00016
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 63 LPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT 122
+P GQ + + T L F+KPG K F L + N+P +TE+E+++ F
Sbjct: 41 IPANGQQASSQNEGLTID-LKNFRKPGEKTFTQ----RSRLFVGNLPPDITEEEMRKLFE 95
Query: 123 EKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
+ G G F KD+ ++L++ A A +++ N L + LRV F+
Sbjct: 96 KYGKA--GEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ-LRVRFA 144
>RGD|1549738 [details] [associations]
symbol:Nono "non-POU domain containing, octamer-binding"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0042382 "paraspeckles" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 RGD:1549738 GO:GO:0005730 GO:GO:0006355 GO:GO:0008380
GO:GO:0000166 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
GO:GO:0006310 InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 CTD:4841 HOGENOM:HOG000231095
HOVERGEN:HBG009801 KO:K13214 OMA:NQQYHKE OrthoDB:EOG4ZCT50
EMBL:BC089880 IPI:IPI00205912 RefSeq:NP_001012356.1 UniGene:Rn.8381
ProteinModelPortal:Q5FVM4 SMR:Q5FVM4 IntAct:Q5FVM4 STRING:Q5FVM4
PhosphoSite:Q5FVM4 PRIDE:Q5FVM4 Ensembl:ENSRNOT00000004911
GeneID:317259 KEGG:rno:317259 UCSC:RGD:1549738 InParanoid:Q5FVM4
NextBio:671515 Genevestigator:Q5FVM4 GermOnline:ENSRNOG00000003689
Uniprot:Q5FVM4
Length = 476
Score = 113 (44.8 bits), Expect = 0.00023, P = 0.00023
Identities = 37/143 (25%), Positives = 63/143 (44%)
Query: 32 HQAHLAMMHMDKLRVFGKQMRVMISKHQAVQLPKEGQPDAGLTKDYTASPLHRFKKPGSK 91
HQ H H + +Q + + +P GQ + + T L F+KPG K
Sbjct: 20 HQHHHQQHHQQQ-----QQQQQQQQQQPPPPIPANGQQASSQNEGLTID-LKNFRKPGEK 73
Query: 92 NFQNIYPPSPTLHLSNIPASVTEDELKEAFTEKGFTVKGFKFFPKDRKMALLQLDSIEEA 151
F L + N+P +TE+E+++ F + G G F KD+ ++L++ A
Sbjct: 74 TFTQ----RSRLFVGNLPPDITEEEMRKLFEKYGKA--GEVFIHKDKGFGFIRLETRTLA 127
Query: 152 ITALIQMHNHQLSEQSHLRVSFS 174
A +++ N L + LRV F+
Sbjct: 128 EIAKVELDNMPLRGKQ-LRVRFA 149
>UNIPROTKB|G5EH29 [details] [associations]
symbol:MGCH7_ch7g848 "RNA binding protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CM000230 EMBL:CM001237 RefSeq:XP_003720628.1
ProteinModelPortal:G5EH29 EnsemblFungi:MGG_03053T0 GeneID:2682606
KEGG:mgr:MGG_03053 Uniprot:G5EH29
Length = 622
Score = 114 (45.2 bits), Expect = 0.00025, P = 0.00025
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 67 GQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT-EKG 125
G P G + P H F P + QN PP TL++ N+P +E+ELK F+ ++G
Sbjct: 388 GTPTMGYLGGHRF-PGHSFP-PVNPADQN--PPCNTLYVGNLPIDTSEEELKATFSKQRG 443
Query: 126 FTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQL--SEQSHLRVSFSKS 176
+ F+ ++ M ++ + + A AL +++ H L S + +R+SFSK+
Sbjct: 444 YKRLCFRT-KQNGPMCFVEFEDVSFATKALHELYGHMLHNSVKGGIRLSFSKN 495
>SGD|S000001448 [details] [associations]
symbol:MSL1 "U2B component of U2 snRNP" species:4932
"Saccharomyces cerevisiae" [GO:0005686 "U2 snRNP" evidence=TAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IEA;ISS;IMP;IPI] [GO:0030620 "U2 snRNA
binding" evidence=IPI] [GO:0071004 "U2-type prespliceosome"
evidence=IDA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0017069 "snRNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR024888 PROSITE:PS50102 SMART:SM00360 SGD:S000001448
GO:GO:0000166 EMBL:BK006942 Gene3D:3.30.70.330 EMBL:X79743
GO:GO:0000398 GO:GO:0005686 GO:GO:0071004 EMBL:Z37996 EMBL:AY558237
PIR:S48353 RefSeq:NP_012274.1 ProteinModelPortal:P40567 SMR:P40567
DIP:DIP-816N IntAct:P40567 MINT:MINT-572508 STRING:P40567
PaxDb:P40567 EnsemblFungi:YIR009W GeneID:854826 KEGG:sce:YIR009W
CYGD:YIR009w eggNOG:NOG317159 GeneTree:ENSGT00390000007046
HOGENOM:HOG000000973 OrthoDB:EOG4TB7MM NextBio:977683
Genevestigator:P40567 GermOnline:YIR009W GO:GO:0030620
PANTHER:PTHR10501 Uniprot:P40567
Length = 111
Score = 89 (36.4 bits), Expect = 0.00052, P = 0.00052
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 1 MFSLTGVYGDVLRVKILYNK-KDSALIQMAESHQAHLAMMHMDKLRVFGKQMRVMISKHQ 59
+F L +G+VL+V + + K + A I M QA LA + ++ R FGK ++V SK +
Sbjct: 48 LFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSE 107
Query: 60 AVQL 63
L
Sbjct: 108 TKTL 111
>UNIPROTKB|Q2KJ42 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=ISS]
[GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0042802 GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975
Pfam:PF08075 eggNOG:NOG298586 GeneTree:ENSGT00390000005004 CTD:4841
HOGENOM:HOG000231095 HOVERGEN:HBG009801 KO:K13214 OrthoDB:EOG4ZCT50
EMBL:DAAA02072840 EMBL:BC105532 IPI:IPI00699994
RefSeq:NP_001040019.1 UniGene:Bt.37860 SMR:Q2KJ42
Ensembl:ENSBTAT00000016122 GeneID:615175 KEGG:bta:615175
InParanoid:Q2KJ42 NextBio:20899485 Uniprot:Q2KJ42
Length = 470
Score = 110 (43.8 bits), Expect = 0.00053, P = 0.00053
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 63 LPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT 122
+P GQ + + T L F+KPG K F L + N+P +TE+E+++ F
Sbjct: 40 MPANGQQASSQNEGLTID-LKNFRKPGEKTFTQ----RSRLFVGNLPPDITEEEMRKLFE 94
Query: 123 EKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
+ G G F KD+ ++L++ A A +++ N L + LRV F+
Sbjct: 95 KYGKA--GEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ-LRVRFA 143
>UNIPROTKB|F1PTP3 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012975
Pfam:PF08075 GeneTree:ENSGT00390000005004 CTD:4841 KO:K13214
OMA:NQQYHKE EMBL:AAEX03026487 RefSeq:XP_849110.1
ProteinModelPortal:F1PTP3 Ensembl:ENSCAFT00000027037 GeneID:612773
KEGG:cfa:612773 Uniprot:F1PTP3
Length = 470
Score = 110 (43.8 bits), Expect = 0.00053, P = 0.00053
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 63 LPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT 122
+P GQ + + T L F+KPG K F L + N+P +TE+E+++ F
Sbjct: 40 IPANGQQASSQNEGLTID-LKNFRKPGEKTFTQ----RSRLFVGNLPPDITEEEMRKLFE 94
Query: 123 EKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
+ G G F KD+ ++L++ A A +++ N L + LRV F+
Sbjct: 95 KYGKA--GEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ-LRVRFA 143
>UNIPROTKB|Q15233 [details] [associations]
symbol:NONO "Non-POU domain-containing octamer-binding
protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0042382 "paraspeckles"
evidence=IDA] [GO:0005634 "nucleus" evidence=TAS] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0016363 "nuclear
matrix" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005730
GO:GO:0006355 GO:GO:0008380 GO:GO:0000166 GO:GO:0003677
GO:GO:0016607 GO:GO:0006281 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0003723 GO:GO:0006310 GO:GO:0016363
EMBL:CH471132 Pathway_Interaction_DB:circadianpathway GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586 EMBL:L14599
EMBL:U89867 EMBL:Y11289 EMBL:Y11290 EMBL:Y11291 EMBL:Y11292
EMBL:Y11293 EMBL:Y11294 EMBL:Y11295 EMBL:Y11296 EMBL:Y11297
EMBL:Y11298 EMBL:U02493 EMBL:AK297144 EMBL:CR456761 EMBL:AL590762
EMBL:BC002364 EMBL:BC003129 EMBL:BC012141 EMBL:BC028299
EMBL:BC069616 EMBL:BC069639 IPI:IPI00304596 IPI:IPI00922367
PIR:G01211 PIR:S29769 PIR:S41768 RefSeq:NP_001138880.1
RefSeq:NP_001138881.1 RefSeq:NP_001138882.1 RefSeq:NP_031389.3
UniGene:Hs.533282 UniGene:Hs.700344 PDB:3SDE PDBsum:3SDE
ProteinModelPortal:Q15233 SMR:Q15233 DIP:DIP-29951N IntAct:Q15233
MINT:MINT-1131452 STRING:Q15233 PhosphoSite:Q15233 DMDM:67469924
REPRODUCTION-2DPAGE:IPI00304596 SWISS-2DPAGE:Q15233 PaxDb:Q15233
PeptideAtlas:Q15233 PRIDE:Q15233 DNASU:4841 Ensembl:ENST00000276079
Ensembl:ENST00000373841 Ensembl:ENST00000373856
Ensembl:ENST00000535149 GeneID:4841 KEGG:hsa:4841 UCSC:uc004dzn.3
CTD:4841 GeneCards:GC0XP070503 HGNC:HGNC:7871 HPA:CAB022069
MIM:300084 neXtProt:NX_Q15233 PharmGKB:PA31680 HOGENOM:HOG000231095
HOVERGEN:HBG009801 InParanoid:Q15233 KO:K13214 OMA:NQQYHKE
OrthoDB:EOG4ZCT50 PhylomeDB:Q15233 GenomeRNAi:4841 NextBio:18654
PMAP-CutDB:Q15233 ArrayExpress:Q15233 Bgee:Q15233 CleanEx:HS_NONO
Genevestigator:Q15233 GermOnline:ENSG00000147140 Uniprot:Q15233
Length = 471
Score = 110 (43.8 bits), Expect = 0.00053, P = 0.00053
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 63 LPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT 122
+P GQ + + T L F+KPG K F L + N+P +TE+E+++ F
Sbjct: 41 IPANGQQASSQNEGLTID-LKNFRKPGEKTFTQ----RSRLFVGNLPPDITEEEMRKLFE 95
Query: 123 EKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
+ G G F KD+ ++L++ A A +++ N L + LRV F+
Sbjct: 96 KYGKA--GEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ-LRVRFA 144
>UNIPROTKB|I3LSU1 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075
GeneTree:ENSGT00390000005004 OMA:NQQYHKE Ensembl:ENSSSCT00000031783
Uniprot:I3LSU1
Length = 471
Score = 110 (43.8 bits), Expect = 0.00053, P = 0.00053
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 63 LPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT 122
+P GQ + + T L F+KPG K F L + N+P +TE+E+++ F
Sbjct: 41 IPANGQQASSQNEGLTID-LKNFRKPGEKTFTQ----RSRLFVGNLPPDITEEEMRKLFE 95
Query: 123 EKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
+ G G F KD+ ++L++ A A +++ N L + LRV F+
Sbjct: 96 KYGKA--GEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ-LRVRFA 144
>MGI|MGI:1855692 [details] [associations]
symbol:Nono "non-POU-domain-containing, octamer binding
protein" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=ISO] [GO:0042382 "paraspeckles" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=ISO]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1855692 GO:GO:0005730 GO:GO:0006355
GO:GO:0008380 GO:GO:0000166 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 GO:GO:0006310 GO:GO:0016363 GO:GO:0042382
InterPro:IPR012975 Pfam:PF08075 eggNOG:NOG298586
GeneTree:ENSGT00390000005004 CTD:4841 HOVERGEN:HBG009801 KO:K13214
OrthoDB:EOG4ZCT50 EMBL:S64860 EMBL:AK004830 EMBL:AK013444
EMBL:AK028338 EMBL:BC005465 EMBL:BC083074 IPI:IPI00320016
IPI:IPI00471251 RefSeq:NP_001239447.1 RefSeq:NP_075633.2
UniGene:Mm.280069 PDB:2CPJ PDB:2RS8 PDBsum:2CPJ PDBsum:2RS8
ProteinModelPortal:Q99K48 SMR:Q99K48 IntAct:Q99K48 STRING:Q99K48
PhosphoSite:Q99K48 PaxDb:Q99K48 PRIDE:Q99K48
Ensembl:ENSMUST00000033673 GeneID:53610 KEGG:mmu:53610
UCSC:uc009txr.2 InParanoid:Q99K48 ChiTaRS:NONO
EvolutionaryTrace:Q99K48 NextBio:310319 Bgee:Q99K48
Genevestigator:Q99K48 GermOnline:ENSMUSG00000031311 Uniprot:Q99K48
Length = 473
Score = 110 (43.8 bits), Expect = 0.00054, P = 0.00054
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 63 LPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT 122
+P GQ + + T L F+KPG K F L + N+P +TE+E+++ F
Sbjct: 43 IPANGQQASSQNEGLTID-LKNFRKPGEKTFTQ----RSRLFVGNLPPDITEEEMRKLFE 97
Query: 123 EKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
+ G G F KD+ ++L++ A A +++ N L + LRV F+
Sbjct: 98 KYGKA--GEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ-LRVRFA 146
>UNIPROTKB|G3N361 [details] [associations]
symbol:NONO "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0042382 "paraspeckles" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0016363 GO:GO:0042382 InterPro:IPR012975 Pfam:PF08075
GeneTree:ENSGT00390000005004 OMA:NQQYHKE EMBL:DAAA02072840
Ensembl:ENSBTAT00000063337 Uniprot:G3N361
Length = 528
Score = 110 (43.8 bits), Expect = 0.00063, P = 0.00063
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 63 LPKEGQPDAGLTKDYTASPLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFT 122
+P GQ + + T L F+KPG K F L + N+P +TE+E+++ F
Sbjct: 98 MPANGQQASSQNEGLTID-LKNFRKPGEKTFTQ----RSRLFVGNLPPDITEEEMRKLFE 152
Query: 123 EKGFTVKGFKFFPKDRKMALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFS 174
+ G G F KD+ ++L++ A A +++ N L + LRV F+
Sbjct: 153 KYGKA--GEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQ-LRVRFA 201
>WB|WBGene00015943 [details] [associations]
symbol:tiar-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0002119 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
GO:GO:0003676 EMBL:FO080599 HSSP:P11940
GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
GeneID:173967 KEGG:cel:CELE_C18A3.5 UCSC:C18A3.5f.1 CTD:173967
NextBio:881893 RefSeq:NP_495121.1 ProteinModelPortal:Q95QV8
SMR:Q95QV8 IntAct:Q95QV8 STRING:Q95QV8 PRIDE:Q95QV8
EnsemblMetazoa:C18A3.5a WormBase:C18A3.5a InParanoid:Q95QV8
OMA:WAVEPGQ ArrayExpress:Q95QV8 Uniprot:Q95QV8
Length = 408
Score = 92 (37.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 26/96 (27%), Positives = 52/96 (54%)
Query: 81 PLHRFKKPGSKNFQNIYPPSPTLHLSNIPASVTEDELKEAFTEKGFTVKGFKFFPKDRKM 140
P H +K + + + ++++ NI AS+TEDE+++ F G + + F K +
Sbjct: 221 PSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFG-RITEVRIF-KMQGY 277
Query: 141 ALLQLDSIEEAITALIQMHNHQLSEQSHLRVSFSKS 176
A ++ D+ + A A++QM+N + Q +R S+ K+
Sbjct: 278 AFVKFDNKDAAAKAIVQMNNQDVGGQL-VRCSWGKT 312
Score = 54 (24.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 11/47 (23%), Positives = 27/47 (57%)
Query: 9 GDVLRVKILYNKKDS--ALIQMAESHQAHLAMMHMDKLRVFGKQMRV 53
G V + K++++ + A ++ ++ QA A+ M+K + ++M+V
Sbjct: 70 GSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKV 116
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 184 184 0.00078 110 3 11 22 0.42 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 88
No. of states in DFA: 529 (56 KB)
Total size of DFA: 134 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 19.95u 0.07s 20.02t Elapsed: 00:00:19
Total cpu time: 19.96u 0.07s 20.03t Elapsed: 00:00:21
Start: Thu Aug 15 12:34:14 2013 End: Thu Aug 15 12:34:35 2013