Your job contains 1 sequence.
>psy17279
MAGIESVLFWLPGERLDHYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISVVA
NLALLVLVGAIGFRIYKSILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADA
TLLELRRIFLVEDFVDSIKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKAT
IDANLEVVQGKIAEITSK
The BLAST search returned 40 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17279
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0053113 - symbol:Rtnl1 "Reticulon-like1" species:7... 558 5.5e-54 1
UNIPROTKB|E1BUW7 - symbol:Gga.4205 "Uncharacterized prote... 445 5.2e-42 1
UNIPROTKB|F1P5B2 - symbol:Gga.4205 "Uncharacterized prote... 445 5.2e-42 1
UNIPROTKB|I3LBH0 - symbol:RTN1 "Uncharacterized protein" ... 437 3.6e-41 1
UNIPROTKB|F1P5B1 - symbol:Gga.4205 "Uncharacterized prote... 434 7.5e-41 1
UNIPROTKB|Q1LZ76 - symbol:RTN1 "Uncharacterized protein" ... 434 7.5e-41 1
UNIPROTKB|F1PNX5 - symbol:RTN1 "Uncharacterized protein" ... 434 7.5e-41 1
UNIPROTKB|Q7YRW9 - symbol:RTN4 "Uncharacterized protein" ... 432 1.2e-40 1
UNIPROTKB|A8MT72 - symbol:RTN1 "Reticulon-1" species:9606... 432 1.2e-40 1
UNIPROTKB|Q6IM70 - symbol:RTN4 "RTN4-C" species:9823 "Sus... 432 1.2e-40 1
UNIPROTKB|F1NCK0 - symbol:Gga.4205 "Uncharacterized prote... 431 1.6e-40 1
UNIPROTKB|Q1RMR8 - symbol:RTN4 "RTN4 protein" species:991... 431 1.6e-40 1
UNIPROTKB|F8W914 - symbol:RTN4 "Reticulon-4" species:9606... 431 1.6e-40 1
UNIPROTKB|H7C106 - symbol:RTN4 "Reticulon-4" species:9606... 431 1.6e-40 1
UNIPROTKB|F1NH22 - symbol:RTN1 "Uncharacterized protein" ... 429 2.6e-40 1
ZFIN|ZDB-GENE-030710-5 - symbol:rtn3 "reticulon 3" specie... 428 3.3e-40 1
UNIPROTKB|F1NNJ7 - symbol:Gga.4205 "Uncharacterized prote... 431 3.5e-40 1
ZFIN|ZDB-GENE-030131-2426 - symbol:rtn1a "reticulon 1a" s... 435 4.0e-40 1
UNIPROTKB|I3L6J1 - symbol:RTN1 "Uncharacterized protein" ... 433 5.3e-40 1
UNIPROTKB|Q16799 - symbol:RTN1 "Reticulon-1" species:9606... 433 5.5e-40 1
UNIPROTKB|F1Q231 - symbol:RTN1 "Uncharacterized protein" ... 431 5.6e-40 1
UNIPROTKB|F1Q2B3 - symbol:RTN1 "Uncharacterized protein" ... 431 6.1e-40 1
UNIPROTKB|E1BP30 - symbol:E1BP30 "Uncharacterized protein... 430 6.8e-40 1
RGD|620986 - symbol:Rtn1 "reticulon 1" species:10116 "Rat... 432 7.0e-40 1
MGI|MGI:1933947 - symbol:Rtn1 "reticulon 1" species:10090... 432 7.2e-40 1
MGI|MGI:1915835 - symbol:Rtn4 "reticulon 4" species:10090... 434 1.3e-39 1
UNIPROTKB|F8WAM4 - symbol:RTN4 "Reticulon-4" species:9606... 432 1.4e-39 1
ZFIN|ZDB-GENE-030710-1 - symbol:rtn4a "reticulon 4a" spec... 422 1.4e-39 1
UNIPROTKB|F1NH23 - symbol:RTN1 "Uncharacterized protein" ... 428 1.8e-39 1
UNIPROTKB|Q9NQC3 - symbol:RTN4 "Reticulon-4" species:9606... 432 2.2e-39 1
UNIPROTKB|A7MC64 - symbol:rtn1 "Reticulon-1" species:8364... 427 2.3e-39 1
ZFIN|ZDB-GENE-030710-3 - symbol:rtn1b "reticulon 1b" spec... 427 2.3e-39 1
UNIPROTKB|D4AEM9 - symbol:Rtn4 "Reticulon-4" species:1011... 430 2.8e-39 1
UNIPROTKB|E2R925 - symbol:RTN4 "Uncharacterized protein" ... 431 2.8e-39 1
UNIPROTKB|F1NCP4 - symbol:Gga.4205 "Uncharacterized prote... 431 2.8e-39 1
UNIPROTKB|J9P0R7 - symbol:RTN4 "Uncharacterized protein" ... 431 2.9e-39 1
UNIPROTKB|F1N405 - symbol:RTN4 "Uncharacterized protein" ... 431 2.9e-39 1
UNIPROTKB|Q6IFY7 - symbol:rtn1-a "Reticulon-1-A" species:... 419 2.9e-39 1
RGD|620989 - symbol:Rtn4 "reticulon 4" species:10116 "Rat... 430 3.5e-39 1
UNIPROTKB|F1LQN3 - symbol:Rtn4 "Reticulon-4" species:1011... 430 3.5e-39 1
UNIPROTKB|Q5MY90 - symbol:rtn1-b "Reticulon-1-B" species:... 418 2.1e-38 1
UNIPROTKB|D4A1U2 - symbol:Rtn3 "Reticulon 3, isoform CRA_... 397 6.3e-37 1
UNIPROTKB|Q08D83 - symbol:RTN3 "Reticulon-3" species:9913... 395 1.0e-36 1
UNIPROTKB|F1RPY3 - symbol:RTN3 "Uncharacterized protein" ... 392 2.1e-36 1
UNIPROTKB|J9P9U4 - symbol:J9P9U4 "Uncharacterized protein... 391 2.7e-36 1
RGD|620988 - symbol:Rtn3 "reticulon 3" species:10116 "Rat... 389 5.5e-35 1
UNIPROTKB|F5H774 - symbol:RTN3 "Reticulon-3" species:9606... 388 6.7e-35 1
UNIPROTKB|O95197 - symbol:RTN3 "Reticulon-3" species:9606... 388 8.6e-35 1
MGI|MGI:1339970 - symbol:Rtn3 "reticulon 3" species:10090... 386 1.2e-34 1
UNIPROTKB|F1PVP5 - symbol:F1PVP5 "Uncharacterized protein... 383 3.0e-34 1
ZFIN|ZDB-GENE-030710-2 - symbol:rtn4b "reticulon 4b" spec... 377 9.0e-34 1
MGI|MGI:107612 - symbol:Rtn2 "reticulon 2 (Z-band associa... 354 2.3e-32 1
RGD|1303245 - symbol:Rtn2 "reticulon 2" species:10116 "Ra... 353 2.9e-32 1
UNIPROTKB|F1LM00 - symbol:Rtn2 "Protein Rtn2" species:101... 353 2.9e-32 1
UNIPROTKB|Q0P586 - symbol:RTN2 "Uncharacterized protein" ... 336 1.8e-30 1
UNIPROTKB|F6S165 - symbol:RTN2 "Uncharacterized protein" ... 336 4.7e-30 1
UNIPROTKB|E2RDR4 - symbol:RTN2 "Uncharacterized protein" ... 332 4.9e-30 1
UNIPROTKB|K7EMR7 - symbol:RTN2 "Reticulon-2" species:9606... 331 6.2e-30 1
WB|WBGene00004336 - symbol:ret-1 species:6239 "Caenorhabd... 347 1.1e-29 1
UNIPROTKB|O75298 - symbol:RTN2 "Reticulon-2" species:9606... 331 1.8e-29 1
UNIPROTKB|Q4FZ76 - symbol:rtn2 "Reticulon-2" species:8355... 297 2.5e-26 1
UNIPROTKB|Q4FZ58 - symbol:rtn2 "Reticulon-2" species:8364... 288 2.2e-25 1
UNIPROTKB|G3MWW1 - symbol:RTN3 "Reticulon-3" species:9913... 279 2.0e-24 1
UNIPROTKB|G8JKY8 - symbol:RTN3 "Reticulon-3" species:9913... 275 5.3e-24 1
ZFIN|ZDB-GENE-060420-1 - symbol:rtn2a "reticulon 2a" spec... 262 1.3e-22 1
UNIPROTKB|G3MZ35 - symbol:RTN3 "Reticulon-3" species:9913... 267 6.7e-22 1
UNIPROTKB|F5H617 - symbol:RTN3 "Reticulon-3" species:9606... 251 1.9e-21 1
ZFIN|ZDB-GENE-060331-95 - symbol:rtn2b "reticulon 2b" spe... 246 6.3e-21 1
UNIPROTKB|Q7RTN0 - symbol:RTN2 "Reticulon-2" species:9606... 206 5.9e-16 1
UNIPROTKB|B7Z4M1 - symbol:RTN3 "Reticulon-3" species:9606... 183 3.0e-14 1
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 177 1.3e-13 1
FB|FBgn0015831 - symbol:Rtnl2 "Rtnl2" species:7227 "Droso... 159 1.0e-11 1
UNIPROTKB|G3X7U3 - symbol:LOC100847649 "Uncharacterized p... 117 2.9e-07 1
DICTYBASE|DDB_G0293088 - symbol:rtnlc "reticulon family p... 123 6.1e-06 1
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 121 6.7e-06 1
SGD|S000002641 - symbol:RTN1 "Reticulon protein" species:... 112 0.00015 1
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 86 0.00033 2
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 108 0.00039 1
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 104 0.00075 1
>FB|FBgn0053113 [details] [associations]
symbol:Rtnl1 "Reticulon-like1" species:7227 "Drosophila
melanogaster" [GO:0042048 "olfactory behavior" evidence=IMP]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0044432 "endoplasmic reticulum part"
evidence=IDA] [GO:0005790 "smooth endoplasmic reticulum"
evidence=IDA] [GO:0045169 "fusome" evidence=IDA] [GO:0002121
"inter-male aggressive behavior" evidence=IMP] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 EMBL:AE014134 GO:GO:0005811
GO:GO:0002121 GO:GO:0042048 GO:GO:0045169 GO:GO:0005790
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
RefSeq:NP_001162875.1 UniGene:Dm.1559 ProteinModelPortal:E1JHT6
SMR:E1JHT6 EnsemblMetazoa:FBtr0301538 GeneID:33721
KEGG:dme:Dmel_CG33113 CTD:33721 FlyBase:FBgn0053113 OMA:YFANEQK
PhylomeDB:E1JHT6 GenomeRNAi:33721 NextBio:784952 Bgee:E1JHT6
GO:GO:0044432 Uniprot:E1JHT6
Length = 607
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 107/189 (56%), Positives = 137/189 (72%)
Query: 10 WLPGERLDHYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXG 69
W ERL H VESL+YWRD K SG VFG L L +++ +S+IS G
Sbjct: 401 WFKPERL-H---PQVESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFG 456
Query: 70 AIGFRIYKSILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIF 129
+ FRIYKS+ QAVQKTNEGHPFK+YLELD++L +KV+ A++H + + ELRR+F
Sbjct: 457 TVAFRIYKSVTQAVQKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLF 516
Query: 130 LVEDFVDSIKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQ 189
LVED +DSIKF +ILW FTYVG+WFNG+TLVI+ FV+LFTLPKVYENNK +ID +L++V+
Sbjct: 517 LVEDIIDSIKFGVILWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVR 576
Query: 190 GKIAEITSK 198
K+ EIT K
Sbjct: 577 SKLTEITDK 585
>UNIPROTKB|E1BUW7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00821143 Ensembl:ENSGALT00000040236 ArrayExpress:E1BUW7
Uniprot:E1BUW7
Length = 347
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 82/196 (41%), Positives = 128/196 (65%)
Query: 5 ESVLFWLPG--ERLDHYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXX 62
+ LF LP E L H + + L+YWRD K +G VFG SL +L+SL +S++S
Sbjct: 139 DETLFALPATSEPLMHSSAGNIVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYI 198
Query: 63 XXXXXXGAIGFRIYKSILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATL 122
I FRIYK ++QA+QK++EGHPF+ YLE D+++ + ++ + + H + T+
Sbjct: 199 ALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTV 258
Query: 123 LELRRIFLVEDFVDSIKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATID 182
ELRR+FLV+D VDS+KF +++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID
Sbjct: 259 KELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQID 318
Query: 183 ANLEVVQGKIAEITSK 198
L +V + + +K
Sbjct: 319 HYLGLVNKNVKDAMAK 334
>UNIPROTKB|F1P5B2 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00594028 Ensembl:ENSGALT00000040233 ArrayExpress:F1P5B2
Uniprot:F1P5B2
Length = 344
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 84/196 (42%), Positives = 129/196 (65%)
Query: 5 ESVLFWLPG--ERLDHYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXX 62
+ LF LP E L H + AV L+YWRD K +G VFG SL +L+SL +S++S
Sbjct: 138 DETLFALPATSEPLMH--SSAVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYI 195
Query: 63 XXXXXXGAIGFRIYKSILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATL 122
I FRIYK ++QA+QK++EGHPF+ YLE D+++ + ++ + + H + T+
Sbjct: 196 ALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTV 255
Query: 123 LELRRIFLVEDFVDSIKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATID 182
ELRR+FLV+D VDS+KF +++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID
Sbjct: 256 KELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQID 315
Query: 183 ANLEVVQGKIAEITSK 198
L +V + + +K
Sbjct: 316 HYLGLVNKNVKDAMAK 331
>UNIPROTKB|I3LBH0 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 CTD:6252 GeneTree:ENSGT00390000009934
EMBL:CU469078 EMBL:FP340567 UniGene:Ssc.13916 GeneID:100152394
KEGG:ssc:100152394 RefSeq:NP_001231570.1 RefSeq:XP_003480527.1
ProteinModelPortal:I3LBH0 SMR:I3LBH0 Ensembl:ENSSSCT00000032115
Uniprot:I3LBH0
Length = 208
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 84/181 (46%), Positives = 126/181 (69%)
Query: 18 HYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYK 77
++ ++A++ L+YWRD K +G VFG L +L SL +S++S I FRIYK
Sbjct: 16 NWKSQAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYK 74
Query: 78 SILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDS 137
S+LQAVQKT+EGHPFK YLEL+I+L ++++ T+ + ++TL ELRR+FLV+D VDS
Sbjct: 75 SVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDS 134
Query: 138 IKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITS 197
+KF +++W TYVG+ FNGLTL+++ V++FTLP VY ++A ID L +V+ I + +
Sbjct: 135 LKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVA 194
Query: 198 K 198
K
Sbjct: 195 K 195
>UNIPROTKB|F1P5B1 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00823248 Ensembl:ENSGALT00000040235 ArrayExpress:F1P5B1
Uniprot:F1P5B1
Length = 326
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 77/176 (43%), Positives = 120/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
AV L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 138 AVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 197
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE D+++ + ++ + + H + T+ ELRR+FLV+D VDS+KF +
Sbjct: 198 IQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAV 257
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L +V + + +K
Sbjct: 258 LMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAK 313
>UNIPROTKB|Q1LZ76 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:DAAA02029288
EMBL:DAAA02029289 EMBL:BC116162 IPI:IPI00904153 UniGene:Bt.22982
SMR:Q1LZ76 STRING:Q1LZ76 Ensembl:ENSBTAT00000015218
NextBio:20875732 Uniprot:Q1LZ76
Length = 208
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 84/181 (46%), Positives = 125/181 (69%)
Query: 18 HYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYK 77
++ ++A++ L+YWRD K +G VFG L +L SL +S++S I FRIYK
Sbjct: 16 NWKSQAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYK 74
Query: 78 SILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDS 137
S+LQAVQKT+EGHPFK YLEL+I+L ++++ T+ + + TL ELRR+FLV+D VDS
Sbjct: 75 SVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDS 134
Query: 138 IKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITS 197
+KF +++W TYVG+ FNGLTL+++ V++FTLP VY ++A ID L +V+ I + +
Sbjct: 135 LKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVA 194
Query: 198 K 198
K
Sbjct: 195 K 195
>UNIPROTKB|F1PNX5 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:DPKKSGI
EMBL:AAEX03005762 Ensembl:ENSCAFT00000024693 Uniprot:F1PNX5
Length = 208
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 84/181 (46%), Positives = 125/181 (69%)
Query: 18 HYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYK 77
++ ++A++ L+YWRD K +G VFG L +L SL +S++S I FRIYK
Sbjct: 16 NWKSQAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYK 74
Query: 78 SILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDS 137
S+LQAVQKT+EGHPFK YLEL+I+L ++++ T+ + + TL ELRR+FLV+D VDS
Sbjct: 75 SVLQAVQKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDS 134
Query: 138 IKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITS 197
+KF +++W TYVG+ FNGLTL+++ V++FTLP VY ++A ID L +V+ I + +
Sbjct: 135 LKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVA 194
Query: 198 K 198
K
Sbjct: 195 K 195
>UNIPROTKB|Q7YRW9 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
UniGene:Bt.105155 GeneID:359718 KEGG:bta:359718 NextBio:20812748
EMBL:BC116111 EMBL:AY164744 IPI:IPI00718559 RefSeq:NP_001068606.1
SMR:Q7YRW9 STRING:Q7YRW9 Ensembl:ENSBTAT00000014744 Uniprot:Q7YRW9
Length = 199
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 76/177 (42%), Positives = 121/177 (68%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+ V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++Q
Sbjct: 10 DKVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQ 69
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
A+QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF
Sbjct: 70 AIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFA 129
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 130 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 186
>UNIPROTKB|A8MT72 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 HGNC:HGNC:10467 ChiTaRS:RTN1
HOGENOM:HOG000015254 EMBL:AL121694 EMBL:AL133299 EMBL:AL139194
IPI:IPI00794113 ProteinModelPortal:A8MT72 SMR:A8MT72 STRING:A8MT72
PRIDE:A8MT72 Ensembl:ENST00000395090 UCSC:uc010apl.2
ArrayExpress:A8MT72 Bgee:A8MT72 Uniprot:A8MT72
Length = 193
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 83/172 (48%), Positives = 119/172 (69%)
Query: 27 LVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAVQKT 86
L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQAVQKT
Sbjct: 9 LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKT 68
Query: 87 NEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVIILWT 146
+EGHPFK YLEL+I+L ++++ T+ + ++TL ELRR+FLV+D VDS+KF +++W
Sbjct: 69 DEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWL 128
Query: 147 FTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
TYVG+ FNGLTL+++ V++FTLP VY ++A ID L +V+ I + +K
Sbjct: 129 LTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAK 180
>UNIPROTKB|Q6IM70 [details] [associations]
symbol:RTN4 "RTN4-C" species:9823 "Sus scrofa" [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 eggNOG:NOG306139 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 OMA:NWKCQAI EMBL:CU929931
EMBL:CU928339 EMBL:BK001795 RefSeq:NP_001123435.1 UniGene:Ssc.94392
SMR:Q6IM70 STRING:Q6IM70 Ensembl:ENSSSCT00000009205
GeneID:100170118 KEGG:ssc:100170118 Uniprot:Q6IM70
Length = 199
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 76/177 (42%), Positives = 121/177 (68%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+ V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++Q
Sbjct: 10 DKVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQ 69
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
A+QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF
Sbjct: 70 AIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFA 129
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 130 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 186
>UNIPROTKB|F1NCK0 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00820463 Ensembl:ENSGALT00000013195 ArrayExpress:F1NCK0
Uniprot:F1NCK0
Length = 199
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 76/177 (42%), Positives = 120/177 (67%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+ V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++Q
Sbjct: 10 DKVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQ 69
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
A+QK++EGHPF+ YLE D+++ + ++ + + H + T+ ELRR+FLV+D VDS+KF
Sbjct: 70 AIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFA 129
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L +V + + +K
Sbjct: 130 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAK 186
>UNIPROTKB|Q1RMR8 [details] [associations]
symbol:RTN4 "RTN4 protein" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
EMBL:BC114748 IPI:IPI00730691 RefSeq:NP_001106692.1
UniGene:Bt.105155 SMR:Q1RMR8 STRING:Q1RMR8
Ensembl:ENSBTAT00000036144 GeneID:359718 KEGG:bta:359718
NextBio:20812748 Uniprot:Q1RMR8
Length = 379
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 76/175 (43%), Positives = 120/175 (68%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA+
Sbjct: 192 VVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 251
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF ++
Sbjct: 252 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 311
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 312 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 366
>UNIPROTKB|F8W914 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01011809
ProteinModelPortal:F8W914 SMR:F8W914 Ensembl:ENST00000402434
ArrayExpress:F8W914 Bgee:F8W914 Uniprot:F8W914
Length = 345
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 76/175 (43%), Positives = 120/175 (68%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA+
Sbjct: 158 VVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 217
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF ++
Sbjct: 218 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 277
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 278 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 332
>UNIPROTKB|H7C106 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 ProteinModelPortal:H7C106 PRIDE:H7C106
Ensembl:ENST00000438462 OMA:NWKCQAI Uniprot:H7C106
Length = 203
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 76/175 (43%), Positives = 120/175 (68%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA+
Sbjct: 29 VVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 88
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF ++
Sbjct: 89 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 148
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 149 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 203
>UNIPROTKB|F1NH22 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02003912
EMBL:AADN02003911 IPI:IPI00583109 Ensembl:ENSGALT00000019594
ArrayExpress:F1NH22 Uniprot:F1NH22
Length = 208
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 82/181 (45%), Positives = 125/181 (69%)
Query: 18 HYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYK 77
++ +A+ +L+YWRD K +G VFG L +L SL +S++S I FRIYK
Sbjct: 16 NWKCQAI-NLLYWRDIKQTGIVFGSLLLLLFSLTQFSVVSVVAYLALAGLSATISFRIYK 74
Query: 78 SILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDS 137
S+LQAVQKT+EGHPFK YL+++++L D+++ T+ + ++T+ ELRR+FLV+D VDS
Sbjct: 75 SVLQAVQKTDEGHPFKAYLDMEMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDS 134
Query: 138 IKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITS 197
+KF +++W TYVG+ FNGLTL+I+ V++FTLP VY+ +A ID L +V+ I + +
Sbjct: 135 LKFAVLMWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQYLGLVRTHINTVVA 194
Query: 198 K 198
K
Sbjct: 195 K 195
>ZFIN|ZDB-GENE-030710-5 [details] [associations]
symbol:rtn3 "reticulon 3" species:7955 "Danio rerio"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-5 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 eggNOG:NOG303514 OrthoDB:EOG4229M0
EMBL:CT030012 EMBL:CU457795 EMBL:AY555038 IPI:IPI00774300
RefSeq:XP_003198973.1 UniGene:Dr.130204 SMR:Q4G5W3
Ensembl:ENSDART00000041088 Ensembl:ENSDART00000124244
GeneID:100538268 KEGG:dre:100538268 InParanoid:Q4G5W3
Uniprot:Q4G5W3
Length = 236
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 77/175 (44%), Positives = 117/175 (66%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V LV+WRDPK SG VFGVSL +L+SLA +S+IS I FRIYKS++QAV
Sbjct: 47 VNDLVHWRDPKKSGVVFGVSLLLLLSLAAFSVISVVSYLLLSLLCVTISFRIYKSVIQAV 106
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
QK+NEGHPFK ++ D+++P + + + +SH + L ++ R+FLVED VDS+K ++
Sbjct: 107 QKSNEGHPFKALMDKDVTVPPETFRKHVDGCLSHVNRALKQMSRLFLVEDLVDSLKLAVV 166
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W TYVG+ FNG+T++I+ + LF++P +YE NK ID +++ + + +K
Sbjct: 167 MWLLTYVGAVFNGITILILADILLFSVPPIYEKNKTQIDHYIDIARTQFNTTVAK 221
>UNIPROTKB|F1NNJ7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00680876
Ensembl:ENSGALT00000031997 ArrayExpress:F1NNJ7 Uniprot:F1NNJ7
Length = 659
Score = 431 (156.8 bits), Expect = 3.5e-40, P = 3.5e-40
Identities = 76/176 (43%), Positives = 120/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 471 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 530
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE D+++ + ++ + + H + T+ ELRR+FLV+D VDS+KF +
Sbjct: 531 IQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAV 590
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L +V + + +K
Sbjct: 591 LMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAK 646
>ZFIN|ZDB-GENE-030131-2426 [details] [associations]
symbol:rtn1a "reticulon 1a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-030131-2426 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG008971 GeneTree:ENSGT00390000009934
EMBL:BX072537 EMBL:AY555044 IPI:IPI00613432 RefSeq:NP_001025138.2
UniGene:Dr.77106 SMR:Q4G5V7 Ensembl:ENSDART00000076574
GeneID:323706 KEGG:dre:323706 CTD:323706 InParanoid:Q4G5V7
OMA:ISHGEER NextBio:20808397 Uniprot:Q4G5V7
Length = 818
Score = 435 (158.2 bits), Expect = 4.0e-40, P = 4.0e-40
Identities = 83/183 (45%), Positives = 121/183 (66%)
Query: 16 LDHYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRI 75
L ++ + V LV+WRD K SG VFG L +L SL +S++S I FR+
Sbjct: 624 LHGFSRQKVVDLVHWRDLKQSGLVFGSVLLLLFSLTQFSVVSVIAYLALAVLSATISFRV 683
Query: 76 YKSILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFV 135
YKS+LQAVQKT+EGHPFK YLE++ISL AD++ + + + T+ ELRR+FLV+D V
Sbjct: 684 YKSVLQAVQKTDEGHPFKSYLEVEISLSADQISKYVDKTQLYINTTMKELRRLFLVQDLV 743
Query: 136 DSIKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEI 195
DSIKF +++W TYVG+ FNGLTL+I+ +++F++P VYE + ID L +V+ ++ +
Sbjct: 744 DSIKFAVLMWLLTYVGALFNGLTLLILAVISMFSVPVVYEKYQTQIDQYLGLVRTQVNSV 803
Query: 196 TSK 198
K
Sbjct: 804 MGK 806
>UNIPROTKB|I3L6J1 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 CTD:6252 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:CU469078 EMBL:FP340567
RefSeq:NP_001231569.1 RefSeq:XP_003480528.1 UniGene:Ssc.13916
Ensembl:ENSSSCT00000022854 GeneID:100152394 KEGG:ssc:100152394
Uniprot:I3L6J1
Length = 770
Score = 433 (157.5 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 84/177 (47%), Positives = 123/177 (69%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+A++ L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQ
Sbjct: 582 KAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 640
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
AVQKT+EGHPFK YLEL+I+L ++++ T+ + ++TL ELRR+FLV+D VDS+KF
Sbjct: 641 AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFA 700
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W TYVG+ FNGLTL+++ V++FTLP VY ++A ID L +V+ I + +K
Sbjct: 701 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAK 757
>UNIPROTKB|Q16799 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 EMBL:CH471061 GO:GO:0030182 GO:GO:0004871
GO:GO:0030176 PANTHER:PTHR10994 HOVERGEN:HBG008971 EMBL:L10333
EMBL:L10334 EMBL:L10335 EMBL:BC090862 EMBL:BC000314 EMBL:BC003003
IPI:IPI00003971 IPI:IPI00219812 IPI:IPI00219813 PIR:A46583
PIR:I60904 RefSeq:NP_066959.1 RefSeq:NP_996734.1 UniGene:Hs.368626
ProteinModelPortal:Q16799 SMR:Q16799 IntAct:Q16799 MINT:MINT-154554
STRING:Q16799 PhosphoSite:Q16799 DMDM:12643733 PaxDb:Q16799
PRIDE:Q16799 Ensembl:ENST00000267484 Ensembl:ENST00000342503
GeneID:6252 KEGG:hsa:6252 UCSC:uc001xek.2 UCSC:uc001xem.1
UCSC:uc001xen.1 CTD:6252 GeneCards:GC14M060062 HGNC:HGNC:10467
HPA:CAB002745 MIM:600865 neXtProt:NX_Q16799 PharmGKB:PA34880
eggNOG:NOG306139 HOGENOM:HOG000134444 InParanoid:Q16799 OMA:PFLNKQK
OrthoDB:EOG437RDX PhylomeDB:Q16799 ChiTaRS:RTN1 GenomeRNAi:6252
NextBio:24277 ArrayExpress:Q16799 Bgee:Q16799 CleanEx:HS_RTN1
Genevestigator:Q16799 GermOnline:ENSG00000139970 Uniprot:Q16799
Length = 776
Score = 433 (157.5 bits), Expect = 5.5e-40, P = 5.5e-40
Identities = 84/177 (47%), Positives = 123/177 (69%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+A++ L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQ
Sbjct: 588 KAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 646
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
AVQKT+EGHPFK YLEL+I+L ++++ T+ + ++TL ELRR+FLV+D VDS+KF
Sbjct: 647 AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFA 706
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W TYVG+ FNGLTL+++ V++FTLP VY ++A ID L +V+ I + +K
Sbjct: 707 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAK 763
>UNIPROTKB|F1Q231 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000024697 Uniprot:F1Q231
Length = 704
Score = 431 (156.8 bits), Expect = 5.6e-40, P = 5.6e-40
Identities = 84/177 (47%), Positives = 122/177 (68%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+A++ L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQ
Sbjct: 516 QAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 574
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
AVQKT+EGHPFK YLEL+I+L ++++ T+ + + TL ELRR+FLV+D VDS+KF
Sbjct: 575 AVQKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFA 634
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W TYVG+ FNGLTL+++ V++FTLP VY ++A ID L +V+ I + +K
Sbjct: 635 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAK 691
>UNIPROTKB|F1Q2B3 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000039479 Uniprot:F1Q2B3
Length = 715
Score = 431 (156.8 bits), Expect = 6.1e-40, P = 6.1e-40
Identities = 84/177 (47%), Positives = 122/177 (68%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+A++ L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQ
Sbjct: 521 QAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 579
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
AVQKT+EGHPFK YLEL+I+L ++++ T+ + + TL ELRR+FLV+D VDS+KF
Sbjct: 580 AVQKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFA 639
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W TYVG+ FNGLTL+++ V++FTLP VY ++A ID L +V+ I + +K
Sbjct: 640 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAK 696
>UNIPROTKB|E1BP30 [details] [associations]
symbol:E1BP30 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:DAAA02029288 EMBL:DAAA02029289
IPI:IPI00924046 Ensembl:ENSBTAT00000061568 ArrayExpress:E1BP30
Uniprot:E1BP30
Length = 697
Score = 430 (156.4 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 84/177 (47%), Positives = 122/177 (68%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+A++ L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQ
Sbjct: 509 KAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 567
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
AVQKT+EGHPFK YLEL+I+L ++++ T+ + + TL ELRR+FLV+D VDS+KF
Sbjct: 568 AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFA 627
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W TYVG+ FNGLTL+++ V++FTLP VY ++A ID L +V+ I + +K
Sbjct: 628 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAK 684
>RGD|620986 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=ISO] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 RGD:620986 GO:GO:0016021 GO:GO:0030182
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252
eggNOG:NOG306139 OrthoDB:EOG437RDX GeneTree:ENSGT00390000009934
EMBL:U17604 EMBL:U17603 IPI:IPI00213559 IPI:IPI00231126
RefSeq:NP_446317.1 UniGene:Rn.55126 ProteinModelPortal:Q64548
SMR:Q64548 STRING:Q64548 PRIDE:Q64548 Ensembl:ENSRNOT00000006373
GeneID:116644 KEGG:rno:116644 UCSC:RGD:620986 HOGENOM:HOG000015254
NextBio:619379 Genevestigator:Q64548 Uniprot:Q64548
Length = 777
Score = 432 (157.1 bits), Expect = 7.0e-40, P = 7.0e-40
Identities = 83/177 (46%), Positives = 123/177 (69%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+A++ L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQ
Sbjct: 589 KAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 647
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
AVQKT+EGHPFK YLEL+I+L ++++ T+ + ++TL ELRR+FLV+D VDS+KF
Sbjct: 648 AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFA 707
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W TYVG+ FNGLTL+++ V++FTLP VY ++A +D L +V+ I + +K
Sbjct: 708 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAK 764
>MGI|MGI:1933947 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1933947
GO:GO:0005783 GO:GO:0016021 GO:GO:0030182 GO:GO:0005789
PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
HOGENOM:HOG000134444 OrthoDB:EOG437RDX ChiTaRS:RTN1 EMBL:AB074899
EMBL:BC030455 EMBL:BC053926 EMBL:BC058579 EMBL:BK001694
IPI:IPI00395193 RefSeq:NP_001007597.1 RefSeq:NP_703187.2
UniGene:Mm.221275 ProteinModelPortal:Q8K0T0 SMR:Q8K0T0
IntAct:Q8K0T0 STRING:Q8K0T0 PhosphoSite:Q8K0T0 PaxDb:Q8K0T0
PRIDE:Q8K0T0 Ensembl:ENSMUST00000078505 GeneID:104001
KEGG:mmu:104001 GeneTree:ENSGT00390000009934 InParanoid:Q8K0T0
NextBio:356325 Bgee:Q8K0T0 CleanEx:MM_RTN1 Genevestigator:Q8K0T0
GermOnline:ENSMUSG00000021087 Uniprot:Q8K0T0
Length = 780
Score = 432 (157.1 bits), Expect = 7.2e-40, P = 7.2e-40
Identities = 83/177 (46%), Positives = 123/177 (69%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+A++ L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQ
Sbjct: 592 KAID-LLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQ 650
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
AVQKT+EGHPFK YLEL+I+L ++++ T+ + ++TL ELRR+FLV+D VDS+KF
Sbjct: 651 AVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFA 710
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W TYVG+ FNGLTL+++ V++FTLP VY ++A +D L +V+ I + +K
Sbjct: 711 VLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAK 767
>MGI|MGI:1915835 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10090 "Mus musculus"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0007399 "nervous system development"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=ISO;IMP]
[GO:0010977 "negative regulation of neuron projection development"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=IMP] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISO;ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISO] [GO:0030334
"regulation of cell migration" evidence=ISO] [GO:0030517 "negative
regulation of axon extension" evidence=ISO;ISS;IMP] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0033603 "positive
regulation of dopamine secretion" evidence=ISO] [GO:0042995 "cell
projection" evidence=IDA] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO;IDA]
[GO:0043209 "myelin sheath" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=ISO] [GO:0048679 "regulation
of axon regeneration" evidence=ISO] [GO:0050771 "negative
regulation of axonogenesis" evidence=ISO] [GO:0051930 "regulation
of sensory perception of pain" evidence=ISO] [GO:0051960
"regulation of nervous system development" evidence=IMP]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IMP] [GO:0070571 "negative regulation of neuron projection
regeneration" evidence=ISO] [GO:0071786 "endoplasmic reticulum
tubular network organization" evidence=ISO] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=ISO;IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1915835
GO:GO:0005886 GO:GO:0005635 GO:GO:0043234 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0042995 GO:GO:0060317 GO:GO:0007413
GO:GO:0048709 GO:GO:0043209 GO:GO:0030517 GO:GO:0021553
EMBL:AL929371 UniGene:Mm.445271 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
ChiTaRS:RTN4 GO:GO:0070571 GO:GO:0048679 GO:GO:2000172
EMBL:AY102280 EMBL:AY102284 EMBL:AY102286 EMBL:AF326337
EMBL:AY114152 EMBL:AK220511 EMBL:BC032192 EMBL:BC056373
EMBL:AB073672 EMBL:AK003859 IPI:IPI00120415 IPI:IPI00270767
IPI:IPI00469392 RefSeq:NP_077188.1 RefSeq:NP_918940.1
RefSeq:NP_918943.1 UniGene:Mm.192580 UniGene:Mm.440639
UniGene:Mm.488364 PDB:2KO2 PDBsum:2KO2 ProteinModelPortal:Q99P72
SMR:Q99P72 IntAct:Q99P72 MINT:MINT-188330 STRING:Q99P72
PhosphoSite:Q99P72 PaxDb:Q99P72 PRIDE:Q99P72
Ensembl:ENSMUST00000060992 Ensembl:ENSMUST00000102841
Ensembl:ENSMUST00000102843 GeneID:68585 KEGG:mmu:68585
UCSC:uc007ihk.2 UCSC:uc007ihn.2 InParanoid:Q99P72 OMA:HTSENKT
OrthoDB:EOG4XH010 EvolutionaryTrace:Q99P72 NextBio:327502
Bgee:Q99P72 CleanEx:MM_RTN4 Genevestigator:Q99P72
GermOnline:ENSMUSG00000020458 Uniprot:Q99P72
Length = 1162
Score = 434 (157.8 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 76/176 (43%), Positives = 122/176 (69%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 974 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 1033
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE ++++ + V+ + +A+ H ++T+ ELRR+FLV+D VDS+KF +
Sbjct: 1034 IQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAV 1093
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 1094 LMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKDAMAK 1149
>UNIPROTKB|F8WAM4 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01025160
ProteinModelPortal:F8WAM4 SMR:F8WAM4 PRIDE:F8WAM4
Ensembl:ENST00000354474 ArrayExpress:F8WAM4 Bgee:F8WAM4
Uniprot:F8WAM4
Length = 960
Score = 432 (157.1 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 76/176 (43%), Positives = 121/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 772 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 831
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF +
Sbjct: 832 IQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAV 891
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 892 LMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 947
>ZFIN|ZDB-GENE-030710-1 [details] [associations]
symbol:rtn4a "reticulon 4a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0002040 "sprouting angiogenesis"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IGI;IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-1 GO:GO:0005783 GO:GO:0007411 GO:GO:0002040
GO:GO:0048936 PANTHER:PTHR10994 HOVERGEN:HBG000838
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BX324134
EMBL:AY555039 IPI:IPI00650155 RefSeq:NP_001073381.1
UniGene:Dr.121711 UniGene:Dr.47577 SMR:Q4G5W2 STRING:Q4G5W2
Ensembl:ENSDART00000081966 GeneID:447816 KEGG:dre:447816 CTD:447816
InParanoid:Q4G5W2 NextBio:20832340 Uniprot:Q4G5W2
Length = 322
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 78/172 (45%), Positives = 114/172 (66%)
Query: 27 LVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAVQKT 86
L+YWRD + +G VFG L +L+SL+ S+IS + FRIYK ILQAVQK+
Sbjct: 138 LLYWRDLQRTGVVFGAGLFLLLSLSMCSIISVLSYVALALLSVTVSFRIYKGILQAVQKS 197
Query: 87 NEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVIILWT 146
+GHPFK YL+ D +LPA+ V +++ + H + + ELRR+FLVED VDS+KF +++W
Sbjct: 198 EDGHPFKMYLDKDTALPAEMVHKYSDSTLVHINTVIKELRRLFLVEDLVDSLKFAVLMWI 257
Query: 147 FTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
TYVG+ FNGLTL+I+GF+ F+ P +YE ++A ID +V + ++ K
Sbjct: 258 LTYVGALFNGLTLIILGFIGAFSCPVIYEKHQAQIDHYYGLVNKQFKDVVGK 309
>UNIPROTKB|F1NH23 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 OMA:PFLNKQK GeneTree:ENSGT00390000009934
EMBL:AADN02003912 EMBL:AADN02003911 IPI:IPI00586633
Ensembl:ENSGALT00000019593 ArrayExpress:F1NH23 Uniprot:F1NH23
Length = 760
Score = 428 (155.7 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 81/173 (46%), Positives = 120/173 (69%)
Query: 26 SLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAVQK 85
+L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQAVQK
Sbjct: 575 NLLYWRDIKQTGIVFGSLLLLLFSLTQFSVVSVVAYLALAGLSATISFRIYKSVLQAVQK 634
Query: 86 TNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVIILW 145
T+EGHPFK YL+++++L D+++ T+ + ++T+ ELRR+FLV+D VDS+KF +++W
Sbjct: 635 TDEGHPFKAYLDMEMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDSLKFAVLMW 694
Query: 146 TFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
TYVG+ FNGLTL+I+ V++FTLP VY+ +A ID L +V+ I + +K
Sbjct: 695 LLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQYLGLVRTHINTVVAK 747
>UNIPROTKB|Q9NQC3 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0060317 "cardiac epithelial to mesenchymal
transition" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IDA] [GO:0030517 "negative regulation of axon extension"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=NAS] [GO:0006915
"apoptotic process" evidence=NAS] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=ISS] [GO:0007413 "axonal
fasciculation" evidence=ISS] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISS] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0030334
"regulation of cell migration" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005886 GO:GO:0005635 Reactome:REACT_111102
GO:GO:0006915 GO:GO:0048011 Pathway_Interaction_DB:p75ntrpathway
EMBL:CH471053 GO:GO:0043234 GO:GO:0042981 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0060317 GO:GO:0007413 GO:GO:0048709
GO:GO:0043209 GO:GO:0030517 GO:GO:0021553 EMBL:AC013414
GO:GO:0045687 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG306139 EMBL:AF087901 EMBL:AF148537 EMBL:AF148538
EMBL:AJ251383 EMBL:AJ251384 EMBL:AJ251385 EMBL:AB040462
EMBL:AB040463 EMBL:AF333336 EMBL:AY102285 EMBL:AY102276
EMBL:AY102277 EMBL:AY102278 EMBL:AY102279 EMBL:AY123245
EMBL:AY123246 EMBL:AY123247 EMBL:AY123248 EMBL:AY123249
EMBL:AY123250 EMBL:AB015639 EMBL:AF077050 EMBL:AF132047
EMBL:AF132048 EMBL:AF320999 EMBL:AB020693 EMBL:AF125103
EMBL:AF177332 EMBL:AC092461 EMBL:AC093165 EMBL:BC001035
EMBL:BC007109 EMBL:BC010737 EMBL:BC012619 EMBL:BC014366
EMBL:BC016165 EMBL:BC026788 EMBL:BC068991 EMBL:BC150182
EMBL:BC152425 EMBL:BC152555 EMBL:AF063601 IPI:IPI00021766
IPI:IPI00219207 IPI:IPI00298289 IPI:IPI00477663 IPI:IPI00478442
IPI:IPI00894213 RefSeq:NP_008939.1 RefSeq:NP_065393.1
RefSeq:NP_722550.1 RefSeq:NP_997403.1 RefSeq:NP_997404.1
UniGene:Hs.741208 PDB:2G31 PDB:2JV5 PDBsum:2G31 PDBsum:2JV5
ProteinModelPortal:Q9NQC3 SMR:Q9NQC3 IntAct:Q9NQC3 MINT:MINT-154434
STRING:Q9NQC3 PhosphoSite:Q9NQC3 DMDM:17369290 PaxDb:Q9NQC3
PRIDE:Q9NQC3 DNASU:57142 Ensembl:ENST00000317610
Ensembl:ENST00000337526 Ensembl:ENST00000357376
Ensembl:ENST00000357732 Ensembl:ENST00000394609
Ensembl:ENST00000394611 Ensembl:ENST00000404909
Ensembl:ENST00000405240 GeneID:57142 KEGG:hsa:57142 UCSC:uc002ryd.3
UCSC:uc002ryf.3 CTD:57142 GeneCards:GC02M055199 H-InvDB:HIX0002059
HGNC:HGNC:14085 HPA:CAB005388 MIM:604475 neXtProt:NX_Q9NQC3
PharmGKB:PA34883 HOVERGEN:HBG023134 InParanoid:Q9NQC3 ChiTaRS:RTN4
EvolutionaryTrace:Q9NQC3 GenomeRNAi:57142 NextBio:63075
PMAP-CutDB:Q9NQC3 ArrayExpress:Q9NQC3 Bgee:Q9NQC3
Genevestigator:Q9NQC3 GermOnline:ENSG00000115310 GO:GO:0070571
GO:GO:0048679 GO:GO:2000172 Uniprot:Q9NQC3
Length = 1192
Score = 432 (157.1 bits), Expect = 2.2e-39, P = 2.2e-39
Identities = 76/176 (43%), Positives = 121/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 1004 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 1063
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF +
Sbjct: 1064 IQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAV 1123
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 1124 LMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 1179
>UNIPROTKB|A7MC64 [details] [associations]
symbol:rtn1 "Reticulon-1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994
HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BC118846
EMBL:BC152060 EMBL:AL635298 EMBL:BK004008 RefSeq:NP_001078819.2
UniGene:Str.40113 ProteinModelPortal:A7MC64 SMR:A7MC64
STRING:A7MC64 Ensembl:ENSXETT00000037003 GeneID:677736
KEGG:xtr:677736 Xenbase:XB-GENE-1011333 Bgee:A7MC64 Uniprot:A7MC64
Length = 764
Score = 427 (155.4 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 82/177 (46%), Positives = 123/177 (69%)
Query: 22 EAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
+A+E L+YWRD K +G VFG L +L SL +S++S I FRIYKS+LQ
Sbjct: 577 KAIE-LLYWRDIKQTGIVFGSVLLMLFSLTQFSVVSVIAYLALAALSATISFRIYKSVLQ 635
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
AVQKT+EGHPFK YL+++ISL ++++ T+ ++ ++ + ELRR+FLV+D VDS+KF
Sbjct: 636 AVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVDSLKFA 695
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+++W TYVG+ FNGLTL+I+ V++F+LP VY+ +A ID L +V+ + I +K
Sbjct: 696 VLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIVTK 752
>ZFIN|ZDB-GENE-030710-3 [details] [associations]
symbol:rtn1b "reticulon 1b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-3 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG008971 HOGENOM:HOG000134444 EMBL:AY555034
IPI:IPI00650731 UniGene:Dr.673 ProteinModelPortal:Q4G5W7 SMR:Q4G5W7
PRIDE:Q4G5W7 InParanoid:Q4G5W7 ArrayExpress:Q4G5W7 Bgee:Q4G5W7
Uniprot:Q4G5W7
Length = 767
Score = 427 (155.4 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 80/180 (44%), Positives = 122/180 (67%)
Query: 19 YATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKS 78
++ E L+YWRD K SG VFG L +L SL +S++S I FR+YKS
Sbjct: 575 FSREKAMELLYWRDLKKSGLVFGSLLLMLFSLTQFSVVSVVAYLALASLSATISFRVYKS 634
Query: 79 ILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSI 138
+LQAVQKT+EGHPFK YL++++SL D+++ E + ++TL ELRR+FLV+D VDS+
Sbjct: 635 VLQAVQKTDEGHPFKVYLDVEMSLSHDQMQKYAENVQYYINSTLKELRRLFLVQDLVDSL 694
Query: 139 KFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
KF +++W TYVG+ FNGLTL+I+ V +F++P VYE +A ID +++++ ++ + +K
Sbjct: 695 KFAVLMWLLTYVGALFNGLTLLIMVVVCMFSMPVVYEKYQAQIDQYVDLIRTQVNSVVAK 754
>UNIPROTKB|D4AEM9 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:620989
GO:GO:0005783 PANTHER:PTHR10994 IPI:IPI00568363
Ensembl:ENSRNOT00000051817 ArrayExpress:D4AEM9 Uniprot:D4AEM9
Length = 1045
Score = 430 (156.4 bits), Expect = 2.8e-39, P = 2.8e-39
Identities = 75/176 (42%), Positives = 121/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 857 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 916
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE ++++ + V+ + +A+ H ++T+ ELRR+FLV+D VDS+KF +
Sbjct: 917 IQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAV 976
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++ ID L + + + +K
Sbjct: 977 LMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAK 1032
>UNIPROTKB|E2R925 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03007528
EMBL:AAEX03007529 Ensembl:ENSCAFT00000004428 Uniprot:E2R925
Length = 1186
Score = 431 (156.8 bits), Expect = 2.8e-39, P = 2.8e-39
Identities = 76/176 (43%), Positives = 121/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 998 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVIQA 1057
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF +
Sbjct: 1058 IQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAV 1117
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 1118 LMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAK 1173
>UNIPROTKB|F1NCP4 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00581683
Ensembl:ENSGALT00000013194 ArrayExpress:F1NCP4 Uniprot:F1NCP4
Length = 1190
Score = 431 (156.8 bits), Expect = 2.8e-39, P = 2.8e-39
Identities = 76/176 (43%), Positives = 120/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 1002 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 1061
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE D+++ + ++ + + H + T+ ELRR+FLV+D VDS+KF +
Sbjct: 1062 IQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAV 1121
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L +V + + +K
Sbjct: 1122 LMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMAK 1177
>UNIPROTKB|J9P0R7 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:HTSENKT
EMBL:AAEX03007528 EMBL:AAEX03007529 Ensembl:ENSCAFT00000045541
Uniprot:J9P0R7
Length = 1198
Score = 431 (156.8 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 76/176 (43%), Positives = 121/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 1010 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVIQA 1069
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF +
Sbjct: 1070 IQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAV 1129
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 1130 LMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMAK 1185
>UNIPROTKB|F1N405 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000172 "regulation of branching morphogenesis of a
nerve" evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IEA] [GO:0060317 "cardiac epithelial
to mesenchymal transition" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 OMA:HTSENKT
EMBL:DAAA02030906 EMBL:DAAA02030907 IPI:IPI00705603
Ensembl:ENSBTAT00000014745 ArrayExpress:F1N405 Uniprot:F1N405
Length = 1202
Score = 431 (156.8 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 76/175 (43%), Positives = 120/175 (68%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA+
Sbjct: 1015 VVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1074
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
QK++EGHPF+ YLE ++++ + V+ + +A+ H + T+ ELRR+FLV+D VDS+KF ++
Sbjct: 1075 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1134
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W FTYVG+ FNGLTL+I+ ++LF++P +YE ++A ID L + + + +K
Sbjct: 1135 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAK 1189
>UNIPROTKB|Q6IFY7 [details] [associations]
symbol:rtn1-a "Reticulon-1-A" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY182251
EMBL:CD360654 EMBL:BK004007 RefSeq:NP_001089006.1 UniGene:Xl.24060
ProteinModelPortal:Q6IFY7 SMR:Q6IFY7 GeneID:496390 KEGG:xla:496390
CTD:496390 Xenbase:XB-GENE-6252069 HOVERGEN:HBG000838
Uniprot:Q6IFY7
Length = 207
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 81/181 (44%), Positives = 123/181 (67%)
Query: 18 HYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYK 77
++ +A++ L+YWRD K +G VFG L +L SL +S++S I FRIYK
Sbjct: 16 NWKCQAID-LLYWRDIKQTGIVFGSVLLMLFSLIQFSVVSVMAYLALAALSATISFRIYK 74
Query: 78 SILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDS 137
S+LQAVQKT+EGHPFK YL+++ISL ++++ T+ + ++ ELRR+FLV+D VDS
Sbjct: 75 SVLQAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDS 134
Query: 138 IKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITS 197
+KF +++W TYVG+ FNGLTL+I+ V++F+LP VY+ +A ID L +V+ + I +
Sbjct: 135 LKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMNTIMT 194
Query: 198 K 198
K
Sbjct: 195 K 195
>RGD|620989 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007413 "axonal fasciculation" evidence=ISO;IDA]
[GO:0007568 "aging" evidence=IEP] [GO:0010977 "negative regulation
of neuron projection development" evidence=IDA] [GO:0014823
"response to activity" evidence=IEP] [GO:0016021 "integral to
membrane" evidence=TAS] [GO:0021553 "olfactory nerve development"
evidence=IEP] [GO:0021801 "cerebral cortex radial glia guided
migration" evidence=ISO;ISS] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISO;IDA] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0030334 "regulation of
cell migration" evidence=ISO] [GO:0030517 "negative regulation of
axon extension" evidence=ISO;ISS;IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0033603 "positive regulation of dopamine
secretion" evidence=IMP] [GO:0042995 "cell projection"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043209
"myelin sheath" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IDA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IDA] [GO:0048679 "regulation
of axon regeneration" evidence=IDA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEP] [GO:0050771 "negative regulation of
axonogenesis" evidence=IDA;IMP] [GO:0051930 "regulation of sensory
perception of pain" evidence=IDA] [GO:0051960 "regulation of
nervous system development" evidence=ISO] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=ISO] [GO:0070571
"negative regulation of neuron projection regeneration"
evidence=IMP] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISO;IDA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 RGD:620989 GO:GO:0005886 GO:GO:0005635
GO:GO:0043234 GO:GO:0032403 GO:GO:0014823 GO:GO:0007568
GO:GO:0051930 GO:GO:0043025 GO:GO:0033603 GO:GO:0045665
GO:GO:0043005 GO:GO:0001525 GO:GO:0030334 GO:GO:0030176
GO:GO:0060317 GO:GO:0007413 GO:GO:0048709 GO:GO:0043209
GO:GO:0030517 GO:GO:0021553 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
GO:GO:0070571 GO:GO:0048679 GO:GO:2000172 OrthoDB:EOG4XH010
EMBL:AF051335 EMBL:AJ242961 EMBL:AJ242962 EMBL:AJ242963
EMBL:AF132045 EMBL:AF132046 IPI:IPI00230986 IPI:IPI00230987
IPI:IPI00231765 IPI:IPI00778998 RefSeq:NP_114019.1 UniGene:Rn.1348
UniGene:Rn.163269 ProteinModelPortal:Q9JK11 SMR:Q9JK11
IntAct:Q9JK11 STRING:Q9JK11 PhosphoSite:Q9JK11 PRIDE:Q9JK11
Ensembl:ENSRNOT00000006957 Ensembl:ENSRNOT00000042965
Ensembl:ENSRNOT00000056823 GeneID:83765 KEGG:rno:83765
UCSC:RGD:620989 HOGENOM:HOG000148576 InParanoid:Q9JK11
NextBio:616333 ArrayExpress:Q9JK11 Genevestigator:Q9JK11
GermOnline:ENSRNOG00000004621 Uniprot:Q9JK11
Length = 1163
Score = 430 (156.4 bits), Expect = 3.5e-39, P = 3.5e-39
Identities = 75/176 (42%), Positives = 121/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 975 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 1034
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE ++++ + V+ + +A+ H ++T+ ELRR+FLV+D VDS+KF +
Sbjct: 1035 IQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAV 1094
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++ ID L + + + +K
Sbjct: 1095 LMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAK 1150
>UNIPROTKB|F1LQN3 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IEA]
[GO:2000172 "regulation of branching morphogenesis of a nerve"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620989 GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 IPI:IPI00231765
PRIDE:F1LQN3 Ensembl:ENSRNOT00000006443 ArrayExpress:F1LQN3
Uniprot:F1LQN3
Length = 1163
Score = 430 (156.4 bits), Expect = 3.5e-39, P = 3.5e-39
Identities = 75/176 (42%), Positives = 121/176 (68%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L+YWRD K +G VFG SL +L+SL +S++S I FRIYK ++QA
Sbjct: 975 SVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQA 1034
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+QK++EGHPF+ YLE ++++ + V+ + +A+ H ++T+ ELRR+FLV+D VDS+KF +
Sbjct: 1035 IQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAV 1094
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
++W FTYVG+ FNGLTL+I+ ++LF++P +YE ++ ID L + + + +K
Sbjct: 1095 LMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAK 1150
>UNIPROTKB|Q5MY90 [details] [associations]
symbol:rtn1-b "Reticulon-1-B" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY484582
EMBL:AF498369 EMBL:BC084108 EMBL:CD326067 EMBL:BK004058
RefSeq:NP_001089011.1 UniGene:Xl.8555 ProteinModelPortal:Q5MY90
SMR:Q5MY90 GeneID:496397 KEGG:xla:496397 CTD:496397
Xenbase:XB-GENE-1011340 HOVERGEN:HBG008971 Uniprot:Q5MY90
Length = 752
Score = 418 (152.2 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 86/196 (43%), Positives = 128/196 (65%)
Query: 3 GIESVLFWLPGERLDHYATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXX 62
G+ S+L P L + +A++ L+YWRD K +G VFG L +L SL +S++S
Sbjct: 549 GMTSILGPKP---LTFFKKKAID-LLYWRDVKQTGIVFGSILLMLFSLTLFSVVSVIAYL 604
Query: 63 XXXXXXGAIGFRIYKSILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATL 122
I FRIYKS+LQAVQKT+EGHPFK YL+++ISL ++++ T + ++
Sbjct: 605 ALAALSATISFRIYKSVLQAVQKTDEGHPFKSYLDIEISLSQEQIQKYTGCFQLYTNSIA 664
Query: 123 LELRRIFLVEDFVDSIKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATID 182
ELRR+FLV+D VDS+KF +++W TYVG+ FNGLTL+I+ V++F+LP VY+ +A ID
Sbjct: 665 KELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQID 724
Query: 183 ANLEVVQGKIAEITSK 198
L +V+ + I +K
Sbjct: 725 QYLGLVRTNMNIIVTK 740
>UNIPROTKB|D4A1U2 [details] [associations]
symbol:Rtn3 "Reticulon 3, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0005783 EMBL:CH473953 PANTHER:PTHR10994
UniGene:Rn.11652 IPI:IPI00562895 Ensembl:ENSRNOT00000046063
Uniprot:D4A1U2
Length = 256
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 76/180 (42%), Positives = 115/180 (63%)
Query: 19 YATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKS 78
++T V L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS
Sbjct: 63 FSTSQVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKS 122
Query: 79 ILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSI 138
++QAVQK+ EGHPFK YL++DI+L ++ + AA+ H + L + R+FLVED VDS+
Sbjct: 123 VIQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSL 182
Query: 139 KFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
K + +W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 183 KLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKSIVEK 242
>UNIPROTKB|Q08D83 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG000838
HOGENOM:HOG000015254 EMBL:BT030534 EMBL:BC123892 EMBL:BC149634
EMBL:BK001797 IPI:IPI00687234 IPI:IPI00837997 RefSeq:NP_872598.1
UniGene:Bt.16079 ProteinModelPortal:Q08D83 SMR:Q08D83 PRIDE:Q08D83
GeneID:359721 KEGG:bta:359721 CTD:10313 eggNOG:NOG303514
InParanoid:Q08D83 OrthoDB:EOG4229M0 NextBio:20812750 Uniprot:Q08D83
Length = 256
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 76/180 (42%), Positives = 114/180 (63%)
Query: 19 YATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKS 78
++T V L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS
Sbjct: 63 FSTSQVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKS 122
Query: 79 ILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSI 138
++QAVQK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+
Sbjct: 123 VIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSL 182
Query: 139 KFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
K + +W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 183 KLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTKSIVEK 242
>UNIPROTKB|F1RPY3 [details] [associations]
symbol:RTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 OMA:VMWLLTY EMBL:FP089542
EMBL:AEMK01195949 Ensembl:ENSSSCT00000014266 Uniprot:F1RPY3
Length = 236
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 76/176 (43%), Positives = 112/176 (63%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
AV L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS++QA
Sbjct: 47 AVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQA 106
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
VQK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+K +
Sbjct: 107 VQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINKALKLIIRLFLVEDLVDSLKLAV 166
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 167 FMWLMTYVGAVFNGITLLILAELLIFSVPVVYEKYKTQIDHYVGIARDQTKSIVEK 222
>UNIPROTKB|J9P9U4 [details] [associations]
symbol:J9P9U4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:IICPYNI
EMBL:AAEX03011658 EMBL:AAEX03011657 Ensembl:ENSCAFT00000043047
Uniprot:J9P9U4
Length = 296
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 76/176 (43%), Positives = 112/176 (63%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
AV L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS++QA
Sbjct: 107 AVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQA 166
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
VQK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+K +
Sbjct: 167 VQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 226
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 227 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEK 282
>RGD|620988 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization"
evidence=IEA;ISO] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
CTD:10313 eggNOG:NOG303514 HOVERGEN:HBG093922 EMBL:AY164698
EMBL:AY496443 EMBL:AF442357 EMBL:AF442358 EMBL:BC062068
EMBL:BC107448 IPI:IPI00421904 IPI:IPI00564622 RefSeq:NP_001009953.2
RefSeq:NP_543185.2 UniGene:Rn.11652 ProteinModelPortal:Q6RJR6
SMR:Q6RJR6 IntAct:Q6RJR6 STRING:Q6RJR6 PRIDE:Q6RJR6
Ensembl:ENSRNOT00000028785 Ensembl:ENSRNOT00000049812 GeneID:140945
KEGG:rno:140945 UCSC:RGD:620988 HOGENOM:HOG000154220 NextBio:620854
ArrayExpress:Q6RJR6 Genevestigator:Q6RJR6 Uniprot:Q6RJR6
Length = 940
Score = 389 (142.0 bits), Expect = 5.5e-35, P = 5.5e-35
Identities = 75/175 (42%), Positives = 112/175 (64%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS++QAV
Sbjct: 752 VHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
QK+ EGHPFK YL++DI+L ++ + AA+ H + L + R+FLVED VDS+K +
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 872 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKSIVEK 926
>UNIPROTKB|F5H774 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AP006289 PANTHER:PTHR10994 CTD:10313 EMBL:AP000753
RefSeq:NP_001252519.1 UniGene:Hs.473761 GeneID:10313 KEGG:hsa:10313
HGNC:HGNC:10469 ChiTaRS:RTN3 IPI:IPI01009279
ProteinModelPortal:F5H774 SMR:F5H774 Ensembl:ENST00000540798
UCSC:uc009yov.3 ArrayExpress:F5H774 Bgee:F5H774 Uniprot:F5H774
Length = 920
Score = 388 (141.6 bits), Expect = 6.7e-35, P = 6.7e-35
Identities = 76/176 (43%), Positives = 112/176 (63%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L++WRD K +G VFG +L +L+SLA +S+IS I FRIYKS++QA
Sbjct: 731 SVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQA 790
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
VQK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+K +
Sbjct: 791 VQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 850
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 851 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEK 906
>UNIPROTKB|O95197 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0005615
"extracellular space" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 GO:GO:0016021 GO:GO:0006915
GO:GO:0019048 GO:GO:0005615 GO:GO:0000139 GO:GO:0006950
GO:GO:0016192 GO:GO:0005789 EMBL:CH471076 EMBL:AP006289
PANTHER:PTHR10994 GO:GO:0071786 CTD:10313 eggNOG:NOG303514
EMBL:AF059524 EMBL:AF059529 EMBL:AF059525 EMBL:AF059526
EMBL:AF059527 EMBL:AF059528 EMBL:AF119297 EMBL:AY427821
EMBL:AY750848 EMBL:AP000753 EMBL:AK297529 EMBL:AB209771
EMBL:AK075412 EMBL:AK222898 EMBL:AK295361 EMBL:BC000634
EMBL:BC010556 EMBL:BC011394 EMBL:BC022993 EMBL:BC100822
EMBL:BC100823 EMBL:BC105981 EMBL:BC105982 EMBL:BC118628
EMBL:BC118550 EMBL:BK001685 EMBL:BK001681 EMBL:BK001684
IPI:IPI00028946 IPI:IPI00394896 IPI:IPI00398795 IPI:IPI00412154
IPI:IPI00743293 RefSeq:NP_001252518.1 RefSeq:NP_001252519.1
RefSeq:NP_001252520.1 RefSeq:NP_006045.1 RefSeq:NP_958831.1
RefSeq:NP_958832.1 RefSeq:NP_958833.1 UniGene:Hs.473761
ProteinModelPortal:O95197 SMR:O95197 IntAct:O95197 STRING:O95197
PhosphoSite:O95197 PaxDb:O95197 PRIDE:O95197 DNASU:10313
Ensembl:ENST00000339997 Ensembl:ENST00000341307
Ensembl:ENST00000354497 Ensembl:ENST00000356000
Ensembl:ENST00000377819 Ensembl:ENST00000537981 GeneID:10313
KEGG:hsa:10313 UCSC:uc001nxm.3 UCSC:uc001nxn.3 UCSC:uc001nxo.3
UCSC:uc001nxp.3 UCSC:uc001nxq.3 GeneCards:GC11P063448
H-InvDB:HIX0021346 HGNC:HGNC:10469 HPA:HPA015649 HPA:HPA015650
MIM:604249 neXtProt:NX_O95197 PharmGKB:PA34882 HOVERGEN:HBG093922
InParanoid:O95197 OMA:KGRISTW ChiTaRS:RTN3 GenomeRNAi:10313
NextBio:39085 ArrayExpress:O95197 Bgee:O95197 Genevestigator:O95197
GermOnline:ENSG00000133318 Uniprot:O95197
Length = 1032
Score = 388 (141.6 bits), Expect = 8.6e-35, P = 8.6e-35
Identities = 76/176 (43%), Positives = 112/176 (63%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
+V L++WRD K +G VFG +L +L+SLA +S+IS I FRIYKS++QA
Sbjct: 843 SVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQA 902
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
VQK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+K +
Sbjct: 903 VQKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 962
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 963 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEK 1018
>MGI|MGI:1339970 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1339970
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 CTD:10313 eggNOG:NOG303514
OrthoDB:EOG4229M0 HOVERGEN:HBG093922 ChiTaRS:RTN3 EMBL:AB046114
EMBL:BK001796 EMBL:AY164700 EMBL:AY507126 EMBL:AY507127
EMBL:AY427822 EMBL:AY750849 EMBL:AF195940 EMBL:AK032109
EMBL:AK036892 EMBL:AK049845 EMBL:AK075883 EMBL:AK088670
EMBL:AK146505 EMBL:AK148792 EMBL:AK148947 EMBL:AK165683
EMBL:BC014697 EMBL:BC036717 EMBL:BC079882 IPI:IPI00112948
IPI:IPI00470981 IPI:IPI00474993 IPI:IPI00480414 IPI:IPI00750847
RefSeq:NP_001003933.1 RefSeq:NP_001003934.1 RefSeq:NP_001258415.1
RefSeq:NP_001258416.1 RefSeq:NP_444306.1 UniGene:Mm.246990
ProteinModelPortal:Q9ES97 SMR:Q9ES97 IntAct:Q9ES97 STRING:Q9ES97
PhosphoSite:Q9ES97 PaxDb:Q9ES97 PRIDE:Q9ES97
Ensembl:ENSMUST00000025667 Ensembl:ENSMUST00000065304
Ensembl:ENSMUST00000088169 Ensembl:ENSMUST00000088171 GeneID:20168
KEGG:mmu:20168 UCSC:uc008glb.1 UCSC:uc008gld.1 UCSC:uc008gle.1
UCSC:uc012bhv.1 InParanoid:Q9ES97 OMA:LTRQFSH NextBio:297685
Bgee:Q9ES97 CleanEx:MM_RTN3 Genevestigator:Q9ES97
GermOnline:ENSMUSG00000024758 Uniprot:Q9ES97
Length = 964
Score = 386 (140.9 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 75/175 (42%), Positives = 111/175 (63%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS++QAV
Sbjct: 776 VHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
QK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+K +
Sbjct: 836 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 895
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 896 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTKSIVEK 950
>UNIPROTKB|F1PVP5 [details] [associations]
symbol:F1PVP5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03011658
EMBL:AAEX03011657 Ensembl:ENSCAFT00000023909 Uniprot:F1PVP5
Length = 1042
Score = 383 (139.9 bits), Expect = 3.0e-34, P = 3.0e-34
Identities = 76/177 (42%), Positives = 112/177 (63%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
AV L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS++QA
Sbjct: 852 AVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQA 911
Query: 83 VQKTNEGHPFKE-YLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
VQK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+K
Sbjct: 912 VQKSEEGHPFKRAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLA 971
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ +W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 972 VFMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTKSIVEK 1028
>ZFIN|ZDB-GENE-030710-2 [details] [associations]
symbol:rtn4b "reticulon 4b" species:7955 "Danio
rerio" [GO:0005199 "structural constituent of cell wall"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 InterPro:IPR003882 Pfam:PF02453 PRINTS:PR01218
PROSITE:PS50845 ZFIN:ZDB-GENE-030710-2 GO:GO:0005783 GO:GO:0005199
PANTHER:PTHR10994 EMBL:AY555051 IPI:IPI00650525
RefSeq:NP_001035425.1 UniGene:Dr.79909 ProteinModelPortal:Q4G5V0
PRIDE:Q4G5V0 GeneID:678586 KEGG:dre:678586 CTD:678586
HOVERGEN:HBG096757 InParanoid:Q4G5V0 NextBio:20902411 Bgee:Q4G5V0
Uniprot:Q4G5V0
Length = 875
Score = 377 (137.8 bits), Expect = 9.0e-34, P = 9.0e-34
Identities = 74/176 (42%), Positives = 109/176 (61%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
AV L+YWRD + S V G L +L+ L+ S+IS + R++ ++LQA
Sbjct: 687 AVLQLLYWRDVRASALVLGSLLLLLLFLSCCSVISVLSYSALCLLTLTLSTRVFTAVLQA 746
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
++KT +GHPF++YLE D+ L AD V +EA + + L+ELRR+FLVED VDS+K +
Sbjct: 747 MRKTEDGHPFRQYLERDVLLSADAVHTHSEALLRRINTALVELRRLFLVEDLVDSLKLAV 806
Query: 143 ILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
LW TYVGSWFNGLTL+II + F+ P YE +++ ID + ++ ++ E K
Sbjct: 807 GLWLLTYVGSWFNGLTLLIIALIGAFSGPIAYERHQSEIDQFISMINTQMREALGK 862
>MGI|MGI:107612 [details] [associations]
symbol:Rtn2 "reticulon 2 (Z-band associated protein)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 MGI:MGI:107612 GO:GO:0016021 GO:GO:0005789
EMBL:AF093624 PANTHER:PTHR10994 HOGENOM:HOG000015254 CTD:6253
eggNOG:NOG250449 HOVERGEN:HBG099866 OMA:REPITGQ OrthoDB:EOG4FJ88W
EMBL:AF038537 EMBL:AF038538 EMBL:AF038539 EMBL:BC031370
IPI:IPI00120427 IPI:IPI00229453 RefSeq:NP_001020535.1
RefSeq:NP_038676.1 UniGene:Mm.24142 ProteinModelPortal:O70622
SMR:O70622 STRING:O70622 PhosphoSite:O70622 PaxDb:O70622
PRIDE:O70622 Ensembl:ENSMUST00000032559 Ensembl:ENSMUST00000108468
GeneID:20167 KEGG:mmu:20167 InParanoid:O70622 NextBio:297679
Bgee:O70622 CleanEx:MM_RTN2 Genevestigator:O70622
GermOnline:ENSMUSG00000030401 Uniprot:O70622
Length = 471
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 67/175 (38%), Positives = 111/175 (63%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YW+D + SGAVF +A L+ L ++S++S I R+Y+ +LQAV
Sbjct: 272 VADLLYWKDTRTSGAVFTGLMASLLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQAV 331
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
+ + +PF+ YL++D++L ++ + ++ SH +T +LR FLVED VDS+K ++
Sbjct: 332 HRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLALL 391
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ T+VG+ FNGLTLVI+G VALFT+P +Y ++A ID + +V +++ I +K
Sbjct: 392 FYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYVGLVTNQLSHIKAK 446
>RGD|1303245 [details] [associations]
symbol:Rtn2 "reticulon 2" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
GO:GO:0005783 PANTHER:PTHR10994 CTD:6253 eggNOG:NOG250449
HOGENOM:HOG000119393 HOVERGEN:HBG099866 OMA:REPITGQ
OrthoDB:EOG4FJ88W IPI:IPI00409538 EMBL:BC129079 EMBL:AY279211
EMBL:BK001788 RefSeq:NP_963856.1 UniGene:Rn.3210 STRING:Q6WN19
GeneID:308410 KEGG:rno:308410 UCSC:RGD:1303245 InParanoid:Q6WN19
NextBio:658806 Genevestigator:Q6WN19 Uniprot:Q6WN19
Length = 469
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 66/175 (37%), Positives = 111/175 (63%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YW+D + SGA+F +A L+ L ++S++S I R+Y+ +LQAV
Sbjct: 270 VADLLYWKDTRTSGAIFTGLMASLLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQAV 329
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
+ + +PF+ YL++D++L ++ + ++ SH +T +LR FLVED VDS+K ++
Sbjct: 330 HRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLALL 389
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ T+VG+ FNGLTLVI+G VALFT+P +Y ++A ID + +V +++ I +K
Sbjct: 390 FYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYVGLVTSQLSHIKAK 444
>UNIPROTKB|F1LM00 [details] [associations]
symbol:Rtn2 "Protein Rtn2" species:10116 "Rattus
norvegicus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
GO:GO:0005783 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
IPI:IPI00409538 Ensembl:ENSRNOT00000022528 ArrayExpress:F1LM00
Uniprot:F1LM00
Length = 470
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 66/175 (37%), Positives = 111/175 (63%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YW+D + SGA+F +A L+ L ++S++S I R+Y+ +LQAV
Sbjct: 271 VADLLYWKDTRTSGAIFTGLMASLLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQAV 330
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
+ + +PF+ YL++D++L ++ + ++ SH +T +LR FLVED VDS+K ++
Sbjct: 331 HRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLALL 390
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ T+VG+ FNGLTLVI+G VALFT+P +Y ++A ID + +V +++ I +K
Sbjct: 391 FYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYVGLVTSQLSHIKAK 445
>UNIPROTKB|Q0P586 [details] [associations]
symbol:RTN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 CTD:6253
eggNOG:NOG250449 HOGENOM:HOG000119393 HOVERGEN:HBG099866
EMBL:DAAA02047375 EMBL:BC120363 IPI:IPI00696516
RefSeq:NP_001106731.1 UniGene:Bt.20228 Ensembl:ENSBTAT00000010770
GeneID:359720 KEGG:bta:359720 InParanoid:Q0P586 NextBio:20812749
Uniprot:Q0P586
Length = 470
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 61/175 (34%), Positives = 109/175 (62%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L++W+D K SG VF + L+SL ++S++S G I R+Y+ +LQAV
Sbjct: 270 VVDLLHWKDAKTSGVVFTCLMVSLLSLLHFSIVSVAAHVALLLLCGTISLRVYRKVLQAV 329
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
+ + +PF+ YL++D++L ++ + ++ S + ++LR FLVED VDS+K ++
Sbjct: 330 HRGDGANPFQAYLDVDLTLTQEQTERLSQQIASRVVSAAIQLRHFFLVEDLVDSLKLALL 389
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ T+VG+ FNGLTL+I+G + +FT+P +Y ++A ID + +V +++ I +K
Sbjct: 390 FYILTFVGAVFNGLTLLILGVIGVFTVPLLYRQHQAQIDQYVGLVTNQLSHIKAK 444
>UNIPROTKB|F6S165 [details] [associations]
symbol:RTN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:REPITGQ
EMBL:DAAA02047375 IPI:IPI00842729 Ensembl:ENSBTAT00000043635
Uniprot:F6S165
Length = 541
Score = 336 (123.3 bits), Expect = 4.7e-30, P = 4.7e-30
Identities = 61/175 (34%), Positives = 109/175 (62%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L++W+D K SG VF + L+SL ++S++S G I R+Y+ +LQAV
Sbjct: 341 VVDLLHWKDAKTSGVVFTCLMVSLLSLLHFSIVSVAAHVALLLLCGTISLRVYRKVLQAV 400
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
+ + +PF+ YL++D++L ++ + ++ S + ++LR FLVED VDS+K ++
Sbjct: 401 HRGDGANPFQAYLDVDLTLTQEQTERLSQQIASRVVSAAIQLRHFFLVEDLVDSLKLALL 460
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ T+VG+ FNGLTL+I+G + +FT+P +Y ++A ID + +V +++ I +K
Sbjct: 461 FYILTFVGAVFNGLTLLILGVIGVFTVPLLYRQHQAQIDQYVGLVTNQLSHIKAK 515
>UNIPROTKB|E2RDR4 [details] [associations]
symbol:RTN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:REPITGQ
EMBL:AAEX03000875 EMBL:AAEX03000876 Ensembl:ENSCAFT00000007156
Uniprot:E2RDR4
Length = 484
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 60/175 (34%), Positives = 109/175 (62%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YW+D + SG VF + L+ L ++S++S G I R+Y+ +LQAV
Sbjct: 284 VADLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVTAHVALLLLCGTISLRVYRKVLQAV 343
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
+ + +PF+ YL++D++L ++++ ++ S + ++LR FLVED VDS+K ++
Sbjct: 344 HRGDGANPFQAYLDVDLTLTREQMERLSQQIASRVVSMAIQLRHFFLVEDLVDSLKLALL 403
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ T+VG+ FNGLTL+I+G + LFT+P +Y ++A +D + +V +++ I +K
Sbjct: 404 FYILTFVGAVFNGLTLLILGVIGLFTVPLLYRQHQAQMDQYVGLVTNQLSHIKAK 458
>UNIPROTKB|K7EMR7 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:CH471126
EMBL:AC138534 PANTHER:PTHR10994 HGNC:HGNC:10468
Ensembl:ENST00000590526 Uniprot:K7EMR7
Length = 271
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 61/175 (34%), Positives = 106/175 (60%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YW+D + SG VF + L+ L ++S++S G I R+Y+ +LQAV
Sbjct: 71 VADLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQAV 130
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
+ + +PF+ YL++D++L ++ + + S + +LR FLVED VDS+K ++
Sbjct: 131 HRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALL 190
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ T+VG+ FNGLTL+I+G + LFT+P +Y ++A ID + +V +++ I +K
Sbjct: 191 FYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAK 245
>WB|WBGene00004336 [details] [associations]
symbol:ret-1 species:6239 "Caenorhabditis elegans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GeneTree:ENSGT00550000074593 PANTHER:PTHR10994 EMBL:Z78066
GeneID:179981 KEGG:cel:CELE_W06A7.3 CTD:179981 NextBio:907638
EMBL:Z78067 RefSeq:NP_001123026.1 ProteinModelPortal:G5EDI2
SMR:G5EDI2 IntAct:G5EDI2 EnsemblMetazoa:W06A7.3f WormBase:W06A7.3f
OMA:EITQNDD Uniprot:G5EDI2
Length = 3303
Score = 347 (127.2 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 65/176 (36%), Positives = 104/176 (59%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFR----IYKSI 79
V ++YWRD K S V ++L VL LA Y L++ A GFR ++K +
Sbjct: 3104 VLDVIYWRDAKKSAIVLSLALLVLFVLAKYPLLTVVTYSLLLALGAAAGFRSIFSVFKKV 3163
Query: 80 LQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIK 139
++KT+ HPF E L D++LP +KV A + + HA +L+++ VE ++SIK
Sbjct: 3164 EAQIKKTDSEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVESPLESIK 3223
Query: 140 FVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEI 195
F ++LW+ TY+ SWF+G TL I+G + +F++PKVYE+N+ ID +L + G + +
Sbjct: 3224 FGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHLATISGHLKNV 3279
>UNIPROTKB|O75298 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0008219 "cell death" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=NAS] [GO:0004871 "signal
transducer activity" evidence=NAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0008219
GO:GO:0004871 GO:GO:0030176 PANTHER:PTHR10994 EMBL:AF004222
EMBL:AF004223 EMBL:AF004224 EMBL:AF038540 EMBL:BK001686
EMBL:BK001687 EMBL:BK001688 IPI:IPI00024983 IPI:IPI00216112
IPI:IPI00410134 RefSeq:NP_005610.1 RefSeq:NP_996783.1
RefSeq:NP_996784.1 UniGene:Hs.47517 ProteinModelPortal:O75298
SMR:O75298 IntAct:O75298 STRING:O75298 PhosphoSite:O75298
PaxDb:O75298 PRIDE:O75298 Ensembl:ENST00000245923
Ensembl:ENST00000344680 Ensembl:ENST00000430715 GeneID:6253
KEGG:hsa:6253 UCSC:uc002pcb.3 UCSC:uc002pcc.3 CTD:6253
GeneCards:GC19M045988 HGNC:HGNC:10468 HPA:HPA034941 MIM:603183
MIM:604805 neXtProt:NX_O75298 Orphanet:100993 PharmGKB:PA34881
eggNOG:NOG250449 HOGENOM:HOG000119393 HOVERGEN:HBG099866
InParanoid:O75298 OMA:REPITGQ OrthoDB:EOG4FJ88W PhylomeDB:O75298
ChiTaRS:RTN2 GenomeRNAi:6253 NextBio:24285 Bgee:O75298
CleanEx:HS_RTN2 Genevestigator:O75298 GermOnline:ENSG00000125744
Uniprot:O75298
Length = 545
Score = 331 (121.6 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 61/175 (34%), Positives = 106/175 (60%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YW+D + SG VF + L+ L ++S++S G I R+Y+ +LQAV
Sbjct: 345 VADLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQAV 404
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
+ + +PF+ YL++D++L ++ + + S + +LR FLVED VDS+K ++
Sbjct: 405 HRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLKLALL 464
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ T+VG+ FNGLTL+I+G + LFT+P +Y ++A ID + +V +++ I +K
Sbjct: 465 FYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAK 519
>UNIPROTKB|Q4FZ76 [details] [associations]
symbol:rtn2 "Reticulon-2" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016021 "integral to
membrane" evidence=NAS] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 GO:GO:0016021 GO:GO:0005789
PANTHER:PTHR10994 CTD:6253 EMBL:AY495962 EMBL:AY495963
EMBL:BC133257 EMBL:CD252970 EMBL:BJ063888 EMBL:BJ082011
EMBL:BK004977 EMBL:BK004978 RefSeq:NP_001089014.1 UniGene:Xl.45326
ProteinModelPortal:Q4FZ76 GeneID:496400 KEGG:xla:496400
Xenbase:XB-GENE-941650 HOVERGEN:HBG108425 Uniprot:Q4FZ76
Length = 321
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 61/177 (34%), Positives = 105/177 (59%)
Query: 23 AVESLVYWRDPKIS-GAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQ 81
AV+ L+YWRD +S G + GV+L+ L+ L+ +S+IS + R+Y +L
Sbjct: 133 AVKDLLYWRDTLLSTGCLTGVTLS-LLCLSQFSVISVFAYGCLIILSVTLTLRLYTKLLH 191
Query: 82 AVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFV 141
A+++ N +PF+ YL+ D+ L + + A S A TL LR +FLVE+ DS+KF+
Sbjct: 192 ALKRGNGANPFQYYLDTDLKLTTKQAEEIVARAFSLASTTLCTLRSLFLVEELKDSLKFL 251
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+I++ TYVG+ FNG+T++++ + FT P +Y+ ++ +D + +V K+ SK
Sbjct: 252 VIVYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSKKVNAFRSK 308
>UNIPROTKB|Q4FZ58 [details] [associations]
symbol:rtn2 "Reticulon-2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021 GO:GO:0005789
PANTHER:PTHR10994 CTD:6253 HOVERGEN:HBG108425 EMBL:BX724945
EMBL:BX734625 EMBL:CF264052 EMBL:BK005002 EMBL:BK005003
RefSeq:NP_001107739.1 UniGene:Str.53598 ProteinModelPortal:Q4FZ58
GeneID:100135745 KEGG:xtr:100135745 Xenbase:XB-GENE-941644
Uniprot:Q4FZ58
Length = 321
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 64/196 (32%), Positives = 113/196 (57%)
Query: 5 ESVLFWL-PGERLDHYATEAVESLVYWRDPKIS-GAVFGVSLAVLISLAYYSLISXXXXX 62
E V+F P +L+ + AV+ L+YWRD +S G + GV+L+ L+ L+ +S+IS
Sbjct: 116 EEVVFVAKPQPQLEVF--RAVKDLLYWRDILLSAGCLTGVTLS-LLCLSQFSVISVFAYG 172
Query: 63 XXXXXXGAIGFRIYKSILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATL 122
+ R+Y +L A+++ N +PF+ YL+ D+ L + + T +S T+
Sbjct: 173 CLIILSVTLTLRLYTKLLHALKRGNGANPFQYYLDADLKLTTKQAEEITARVLSLLSTTI 232
Query: 123 LELRRIFLVEDFVDSIKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATID 182
LR +FLVE+ DS+KF++I++ TYVG+ FNG+T++++ + FT P +Y+ ++ +D
Sbjct: 233 CTLRSLFLVEELKDSLKFLVIIYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVD 292
Query: 183 ANLEVVQGKIAEITSK 198
+ +V K SK
Sbjct: 293 HYVSLVSKKGNAFRSK 308
>UNIPROTKB|G3MWW1 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063497
EMBL:DAAA02063502 EMBL:DAAA02063503 EMBL:DAAA02063498
EMBL:DAAA02063499 EMBL:DAAA02063500 EMBL:DAAA02063501
EMBL:DAAA02063504 EMBL:DAAA02063505 Ensembl:ENSBTAT00000066230
Uniprot:G3MWW1
Length = 185
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 55/121 (45%), Positives = 79/121 (65%)
Query: 19 YATEAVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKS 78
++T V L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS
Sbjct: 63 FSTSQVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKS 122
Query: 79 ILQAVQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSI 138
++QAVQK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+
Sbjct: 123 VIQAVQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSL 182
Query: 139 K 139
K
Sbjct: 183 K 183
>UNIPROTKB|G8JKY8 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063497
EMBL:DAAA02063502 EMBL:DAAA02063503 EMBL:DAAA02063498
EMBL:DAAA02063499 EMBL:DAAA02063500 EMBL:DAAA02063501
EMBL:DAAA02063504 EMBL:DAAA02063505 Ensembl:ENSBTAT00000025564
Uniprot:G8JKY8
Length = 166
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 55/117 (47%), Positives = 77/117 (65%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
AV L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS++QA
Sbjct: 48 AVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQA 107
Query: 83 VQKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIK 139
VQK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+K
Sbjct: 108 VQKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLK 164
>ZFIN|ZDB-GENE-060420-1 [details] [associations]
symbol:rtn2a "reticulon 2a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-060420-1 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 EMBL:CR925772 EMBL:BC115054 EMBL:AY576807
IPI:IPI00775060 RefSeq:NP_001025136.1 UniGene:Dr.45249
Ensembl:ENSDART00000124998 GeneID:569502 KEGG:dre:569502 CTD:569502
eggNOG:NOG260892 InParanoid:Q4G5K8 OMA:LFQLSII OrthoDB:EOG4NCMDZ
NextBio:20889711 Uniprot:Q4G5K8
Length = 203
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 57/172 (33%), Positives = 96/172 (55%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V LVYW+D + +G V + L+SL S+I+ I RIY +L +
Sbjct: 5 VMDLVYWKDMERTGMVLTGLVVALLSLFQLSIITVVSTLSLAILCFTISVRIYYKLLHVL 64
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVII 143
Q + HPF+ YL+LDISL ++ + + AI + + L LR + V + S+KF ++
Sbjct: 65 QLGDGVHPFQSYLDLDISLSGEEAEHCLQRAIVLSCSALETLRNLIFVGNLFSSLKFWLL 124
Query: 144 LWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEI 195
++ T++G+ NGLTL+IIG +A+F++P Y ++ +D+ + VQ +I I
Sbjct: 125 MYVVTFLGNLCNGLTLIIIGVIAVFSVPLFYTRHQDKVDSCIVAVQAQIDNI 176
>UNIPROTKB|G3MZ35 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
OMA:LTRQFSH EMBL:DAAA02063497 EMBL:DAAA02063502 EMBL:DAAA02063503
EMBL:DAAA02063498 EMBL:DAAA02063499 EMBL:DAAA02063500
EMBL:DAAA02063501 EMBL:DAAA02063504 EMBL:DAAA02063505
Ensembl:ENSBTAT00000064574 Uniprot:G3MZ35
Length = 959
Score = 267 (99.0 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
AV L++WRD K +G VFG +L +L+SLA +S+IS I FR+YKS++QA
Sbjct: 840 AVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQA 899
Query: 83 VQKTNEGHPFKE-YLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIK 139
VQK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED VDS+K
Sbjct: 900 VQKSEEGHPFKRAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLK 957
>UNIPROTKB|F5H617 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AP006289 PANTHER:PTHR10994 EMBL:AP000753 HGNC:HGNC:10469
ChiTaRS:RTN3 IPI:IPI01014910 ProteinModelPortal:F5H617 SMR:F5H617
Ensembl:ENST00000542238 ArrayExpress:F5H617 Bgee:F5H617
Uniprot:F5H617
Length = 185
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 51/112 (45%), Positives = 72/112 (64%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
+ L++WRD K +G VFG +L +L+SLA +S+IS I FRIYKS++QAV
Sbjct: 74 MHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 133
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFV 135
QK+ EGHPFK YL++DI+L ++ AA+ H + L + R+FLVED V
Sbjct: 134 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLV 185
>ZFIN|ZDB-GENE-060331-95 [details] [associations]
symbol:rtn2b "reticulon 2b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-060331-95 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
EMBL:BX248087 EMBL:BC114230 EMBL:AY555064 IPI:IPI00485938
RefSeq:NP_001025130.1 UniGene:Dr.88737 Ensembl:ENSDART00000079431
GeneID:562639 KEGG:dre:562639 CTD:562639 InParanoid:Q4G5T7
OMA:QQVRIRR NextBio:20884503 Uniprot:Q4G5T7
Length = 208
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 61/176 (34%), Positives = 98/176 (55%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRI-YKSILQA 82
V L+YWR+ +G VF + L SL S I+ + R+ YK++
Sbjct: 5 VLDLIYWRNLATTGVVFTGLVVGLASLFQLSAITILSNLGLSIMAFTLPVRLLYKAM--T 62
Query: 83 VQKTNEG-HPFKEYLELDISLP-ADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKF 140
V + N+G HPF+ YL+ D +L D V+ A + + A A + EL+R+F ++ +DS+KF
Sbjct: 63 VTRLNDGSHPFQSYLDEDHTLTDEDTVRMAEQMVLLIATA-VSELKRLFFIDSIMDSVKF 121
Query: 141 VIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEIT 196
++ L+ TYVG NGLTLV+ G + F+LP +Y+ + ID ++ VQ + +IT
Sbjct: 122 IVFLYLLTYVGVQANGLTLVMSGVICAFSLPLLYKLQQERIDKIIKAVQLLVEKIT 177
>UNIPROTKB|Q7RTN0 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:CH471126 EMBL:AC138534 PANTHER:PTHR10994 IPI:IPI00024983
UniGene:Hs.47517 HGNC:HGNC:10468 HOVERGEN:HBG099866 ChiTaRS:RTN2
EMBL:BK001689 ProteinModelPortal:Q7RTN0 STRING:Q7RTN0 PRIDE:Q7RTN0
Ensembl:ENST00000587597 ArrayExpress:Q7RTN0 Bgee:Q7RTN0
Uniprot:Q7RTN0
Length = 461
Score = 206 (77.6 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 39/116 (33%), Positives = 66/116 (56%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
V L+YW+D + SG VF + L+ L ++S++S G I R+Y+ +LQAV
Sbjct: 345 VADLLYWKDTRTSGVVFTGLMVSLLCLLHFSIVSVAAHLALLLLCGTISLRVYRKVLQAV 404
Query: 84 QKTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIK 139
+ + +PF+ YL++D++L ++ + + S + +LR FLVED VDS+K
Sbjct: 405 HRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSLK 460
>UNIPROTKB|B7Z4M1 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:CH471076 EMBL:AP006289 PANTHER:PTHR10994 HOGENOM:HOG000015254
EMBL:AP000753 UniGene:Hs.473761 HGNC:HGNC:10469 ChiTaRS:RTN3
EMBL:AK297533 IPI:IPI01010161 SMR:B7Z4M1 STRING:B7Z4M1
Ensembl:ENST00000536011 Uniprot:B7Z4M1
Length = 123
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 23 AVESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQA 82
AV L++WRD K +G VFG +L +L+SLA +S+IS I FRIYKS++QA
Sbjct: 47 AVHDLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQA 106
Query: 83 VQKTNEGHPF 92
VQK+ EGHPF
Sbjct: 107 VQKSEEGHPF 116
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 49/155 (31%), Positives = 73/155 (47%)
Query: 30 WRDPKISGAVFGVSLA--VLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAVQKTN 87
WRD K+SGAV GV+ A VL L Y L+S G ++ + + KT+
Sbjct: 74 WRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLF---LWSNAHTLINKTS 130
Query: 88 EGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVIILWTF 147
P +I +P + + + + + LR I L D + V+ LW
Sbjct: 131 PQIP-------EIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWII 183
Query: 148 TYVGSWFNGLTLVIIGFVALFTLPKVYENNKATID 182
+ VG+WFN LTLV I FV L T+P +YE ++ +D
Sbjct: 184 SVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVD 218
>FB|FBgn0015831 [details] [associations]
symbol:Rtnl2 "Rtnl2" species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 EMBL:U51048 STRING:Q24199 PRIDE:Q24199
FlyBase:FBgn0015831 HOGENOM:HOG000002795 InParanoid:Q24199
OrthoDB:EOG45QFW7 ArrayExpress:Q24199 Bgee:Q24199 Uniprot:Q24199
Length = 158
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/149 (28%), Positives = 73/149 (48%)
Query: 24 VESLVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAV 83
+++L+ WR+ + + VF L +L+ + +S+IS AIG R+
Sbjct: 7 LKNLLLWRNSRKTLIVFTGILLLLLDVMVHSVISVISMVGITVLIAAIGHRLLVQFWSIW 66
Query: 84 QKT-NEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVI 142
+K N+ + Y I +P ++ A+SH + L + + LVE + DS+KF++
Sbjct: 67 KKDENKDQILRFYPHPKIEIPREETLYLAGKAVSHINLILNRMIELLLVEKWEDSLKFLV 126
Query: 143 ILWTFTYVGSWFNGLTLVIIGF-VALFTL 170
+L +G FNGLTL+I G + TL
Sbjct: 127 LLCGINLLGDCFNGLTLLIFGMCICCLTL 155
>UNIPROTKB|G3X7U3 [details] [associations]
symbol:LOC100847649 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063501
Ensembl:ENSBTAT00000046142 Uniprot:G3X7U3
Length = 74
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 139 KFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
+ + +W TYVG+ FNG+TL+I+ + +F++P VYE K ID + + + + I K
Sbjct: 1 QLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTKSIVEK 60
>DICTYBASE|DDB_G0293088 [details] [associations]
symbol:rtnlc "reticulon family protein" species:44689
"Dictyostelium discoideum" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
dictyBase:DDB_G0293088 GO:GO:0005783 GenomeReviews:CM000155_GR
EMBL:AAFI02000199 PANTHER:PTHR10994 eggNOG:NOG300173
RefSeq:XP_629313.1 EnsemblProtists:DDB0233863 GeneID:8629036
KEGG:ddi:DDB_G0293088 InParanoid:Q54CA6 OMA:KIVLWED
ProtClustDB:CLSZ2846573 Uniprot:Q54CA6
Length = 316
Score = 123 (48.4 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 45/182 (24%), Positives = 77/182 (42%)
Query: 22 EAVESLVYWRDPKISGAVFGV-SLA-VLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSI 79
E V+ +V W D +G +F + +L +LIS YSLIS +I F + I
Sbjct: 119 ECVKKIVLWEDIVQTGILFAIINLVFILISFCNYSLISLFGYTAFTVTITSILFHLISLI 178
Query: 80 LQA-VQKTNEGHPFKEYLE-LDISLPADKVKAATEAAISHADATLLELRR-IFLVEDFVD 136
L VQ + + F + L+ L + D V ++ T+L + + +F +
Sbjct: 179 LSKYVQGVSLNNQFTDQLKTLSFHIH-DAVIEKQVNNVAELINTVLSIAKDVFGCKSVYL 237
Query: 137 SIKFVIILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEIT 196
S +F I+ + + + ++ GF+ F +P++Y K ID V E
Sbjct: 238 SAQFAIVFYLIGCLSKCLSNTAILYFGFLVSFVVPRLYVEKKEVIDQQFSKVCALAKEPL 297
Query: 197 SK 198
SK
Sbjct: 298 SK 299
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 121 (47.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 40/156 (25%), Positives = 63/156 (40%)
Query: 30 WRDPKISGAVFGVSLA--VLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAVQKTN 87
WR+ K+SG V G A VL L Y L++ ++ + + K+
Sbjct: 74 WRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALF---LWSNACTFIHKST 130
Query: 88 EGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVIILWTF 147
P ++ +P D + + L LR I +D I + LW
Sbjct: 131 PHIP-------EVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVL 183
Query: 148 TYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDA 183
+ +GS +N LTL V LFT+P +YE + +DA
Sbjct: 184 SIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDA 219
>SGD|S000002641 [details] [associations]
symbol:RTN1 "Reticulon protein" species:4932 "Saccharomyces
cerevisiae" [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IGI;IMP;IPI] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007029 "endoplasmic reticulum organization"
evidence=IGI] [GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IDA] [GO:0032541 "cortical endoplasmic
reticulum" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0051292 "nuclear pore complex assembly"
evidence=IGI] [GO:0003674 "molecular_function" evidence=ND]
[GO:0071788 "endoplasmic reticulum tubular network maintenance"
evidence=IGI] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
SGD:S000002641 GO:GO:0005739 GO:GO:0005794 EMBL:BK006938
EMBL:Z48612 GO:GO:0032541 GO:GO:0051292 GO:GO:0071458
RefSeq:NP_010519.3 GeneID:851819 KEGG:sce:YDR233C PANTHER:PTHR10994
RefSeq:NP_010523.3 GeneID:851823 KEGG:sce:YDR237W eggNOG:NOG116114
OrthoDB:EOG44BFB7 EMBL:AY164798 EMBL:AY558579 PIR:S59439
ProteinModelPortal:Q04947 DIP:DIP-4090N IntAct:Q04947
MINT:MINT-510849 STRING:Q04947 PaxDb:Q04947 PeptideAtlas:Q04947
EnsemblFungi:YDR233C CYGD:YDR233c GeneTree:ENSGT00530000066264
HOGENOM:HOG000248018 OMA:AFIFAAR NextBio:969686
Genevestigator:Q04947 GermOnline:YDR233C GO:GO:0071788
Uniprot:Q04947
Length = 295
Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
Identities = 46/166 (27%), Positives = 70/166 (42%)
Query: 27 LVYWRDPKISGAVFGVSLAVLISLAYYSLISXXXXXXXXX--XXGAIGFRIYKSILQAVQ 84
L+ WR+P +G FG SL L+ L +LI+ G+I F + K L
Sbjct: 23 LLLWRNPVQTGKYFGGSLLALLILKKVNLITFFLKVAYTILFTTGSIEF-VSKLFLGQGL 81
Query: 85 KTNEGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVIIL 144
T G P KE + A +K + A+ +R+ + + K + L
Sbjct: 82 ITKYG-P-KECPNI-----AGFIKPHIDEALKQLPVFQAHIRKTVFAQVPKHTFKTAVAL 134
Query: 145 WTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQG 190
+ SWF+ T+V + + FTLP +Y + K IDA V QG
Sbjct: 135 FLLHKFFSWFSIWTIVFVADIFTFTLPVIYHSYKHEIDAT--VAQG 178
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 86 (35.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 142 IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSK 198
I L+ + +G++FN + L+ IGFV++ TLP +YE + +D + K+ ++ K
Sbjct: 149 ISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKK 205
Score = 57 (25.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 24 VESLVYWRDPKISGA-VFGVSLA-VLISLAYYSLIS 57
V ++ WR+PKI+ V GVS+ L+ + Y+ I+
Sbjct: 39 VADILLWREPKIAATLVIGVSILWFLMEVVEYNFIT 74
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 108 (43.1 bits), Expect = 0.00039, P = 0.00039
Identities = 37/156 (23%), Positives = 67/156 (42%)
Query: 30 WRDPKISGAVFG-VSLA-VLISLAYYSLISXXXXXXXXXXXGAIGFRIYKSILQAVQKTN 87
W+D K+SG VFG ++A VL L Y L++ A+ F ++ + + K+
Sbjct: 91 WKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVAL--AVLF-LWSNATMFIHKSP 147
Query: 88 EGHPFKEYLELDISLPADKVKAATEAAISHADATLLELRRIFLVEDFVDSIKFVIILWTF 147
P ++ +P + + + + LR I D + + LW
Sbjct: 148 PKIP-------EVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVL 200
Query: 148 TYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDA 183
+ +G ++ LTL I V LFT+P Y+ + +D+
Sbjct: 201 SILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDS 236
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 104 (41.7 bits), Expect = 0.00075, P = 0.00075
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 134 FVDSIKFV-IILWTFTYVGSWFNGLTLVIIGFVALFTLPKVYENNKATIDANLEVVQGKI 192
FV ++K V ++LW +YVG+ N LTLV IG + + P VYE + ID + +
Sbjct: 141 FVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFV 200
Query: 193 AEITSK 198
I+ K
Sbjct: 201 RNISRK 206
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 187 0.00085 110 3 11 22 0.40 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 79
No. of states in DFA: 571 (61 KB)
Total size of DFA: 146 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.61u 0.08s 14.69t Elapsed: 00:00:01
Total cpu time: 14.62u 0.08s 14.70t Elapsed: 00:00:01
Start: Thu Aug 15 12:39:32 2013 End: Thu Aug 15 12:39:33 2013