BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy17282
MFSVSISPGFVALFTLPKVYENNKATIDANLEVVQGKIAEITSKVKAAIPIGKKEEKKEQ

High Scoring Gene Products

Symbol, full name Information P value
Rtnl1
Reticulon-like1 		protein from Drosophila melanogaster 9.6e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy17282
        (60 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0053113 - symbol:Rtnl1 "Reticulon-like1" species:7...   160  9.6e-11   1


>FB|FBgn0053113 [details] [associations]
            symbol:Rtnl1 "Reticulon-like1" species:7227 "Drosophila
            melanogaster" [GO:0042048 "olfactory behavior" evidence=IMP]
            [GO:0005811 "lipid particle" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0044432 "endoplasmic reticulum part"
            evidence=IDA] [GO:0005790 "smooth endoplasmic reticulum"
            evidence=IDA] [GO:0045169 "fusome" evidence=IDA] [GO:0002121
            "inter-male aggressive behavior" evidence=IMP] InterPro:IPR003388
            Pfam:PF02453 PROSITE:PS50845 EMBL:AE014134 GO:GO:0005811
            GO:GO:0002121 GO:GO:0042048 GO:GO:0045169 GO:GO:0005790
            PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
            RefSeq:NP_001162875.1 UniGene:Dm.1559 ProteinModelPortal:E1JHT6
            SMR:E1JHT6 EnsemblMetazoa:FBtr0301538 GeneID:33721
            KEGG:dme:Dmel_CG33113 CTD:33721 FlyBase:FBgn0053113 OMA:YFANEQK
            PhylomeDB:E1JHT6 GenomeRNAi:33721 NextBio:784952 Bgee:E1JHT6
            GO:GO:0044432 Uniprot:E1JHT6
        Length = 607

 Score = 160 (61.4 bits), Expect = 9.6e-11, P = 9.6e-11
 Identities = 29/46 (63%), Positives = 39/46 (84%)

Query:    10 FVALFTLPKVYENNKATIDANLEVVQGKIAEITSKVKAAIPIGKKE 55
             FV+LFTLPKVYENNK +ID +L++V+ K+ EIT K++ AIPIG K+
Sbjct:   551 FVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKK 596


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.129   0.336    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       60        60   0.00091  102 3  10 23  0.40    28
                                                     29  0.37    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  456 (49 KB)
  Total size of DFA:  83 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.17u 0.08s 10.25t   Elapsed:  00:00:05
  Total cpu time:  10.17u 0.08s 10.25t   Elapsed:  00:00:05
  Start:  Thu Aug 15 12:46:31 2013   End:  Thu Aug 15 12:46:36 2013

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