Query psy17283
Match_columns 635
No_of_seqs 300 out of 1902
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 18:04:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17283.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17283hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 8E-119 3E-123 1022.9 24.2 365 2-376 168-821 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 2E-111 8E-116 967.8 33.1 375 2-376 127-763 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 2E-108 6E-113 941.7 30.7 366 2-375 117-740 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 5E-108 2E-112 937.5 29.8 359 2-369 118-721 (796)
5 1ygp_A Yeast glycogen phosphor 100.0 2.7E-60 9.4E-65 542.2 10.5 236 342-584 360-606 (879)
6 2gj4_A Glycogen phosphorylase, 100.0 3.2E-50 1.1E-54 462.2 16.4 235 342-583 321-555 (824)
7 1l5w_A Maltodextrin phosphoryl 100.0 5.4E-50 1.8E-54 458.9 14.4 235 341-585 299-533 (796)
8 2c4m_A Glycogen phosphorylase; 100.0 2.2E-49 7.6E-54 453.9 15.7 234 341-585 289-523 (796)
9 3vue_A GBSS-I, granule-bound s 82.2 0.25 8.6E-06 54.9 -0.2 59 453-516 229-291 (536)
10 3vue_A GBSS-I, granule-bound s 68.3 5.6 0.00019 44.0 5.9 93 205-315 332-451 (536)
11 3c48_A Predicted glycosyltrans 31.6 69 0.0024 32.9 6.5 102 204-315 247-375 (438)
12 3t5t_A Putative glycosyltransf 30.3 4.2E+02 0.015 28.9 12.8 60 205-270 286-346 (496)
13 2f9f_A First mannosyl transfer 29.3 40 0.0014 30.5 3.7 27 285-313 119-145 (177)
14 2x6q_A Trehalose-synthase TRET 27.9 94 0.0032 31.7 6.8 105 203-320 234-369 (416)
15 3s28_A Sucrose synthase 1; gly 24.0 1.3E+02 0.0043 35.2 7.5 101 205-315 577-714 (816)
16 3nb0_A Glycogen [starch] synth 23.6 50 0.0017 38.1 3.8 80 454-577 249-330 (725)
17 2bfw_A GLGA glycogen synthase; 21.8 1.3E+02 0.0044 27.0 5.8 98 202-315 38-164 (200)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=8.4e-119 Score=1022.94 Aligned_cols=365 Identities=57% Similarity=0.917 Sum_probs=343.0
Q ss_pred CccccchhhhhhcCCCeEEEeeccCCCceeEEeeCCeeeccCcchhhh--------------------------------
Q psy17283 2 RLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRY-------------------------------- 49 (635)
Q Consensus 2 rLA~~~l~s~a~l~~p~~g~gl~Y~~G~f~Q~i~~g~Q~e~~~~wl~~-------------------------------- 49 (635)
||||||||||||||+|++||||||+||||+|+|.||||+|.||+|+..
T Consensus 168 rLAacfLdS~AtLglP~~GyGlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~ 247 (879)
T 1ygp_A 168 RLAACFVDSMATEGIPAWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLS 247 (879)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTS
T ss_pred HHHHHHHHHHHhCCCCeEEEEeeecCCceEEEeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcc
Confidence 899999999999999999999999999999999999999999988532
Q ss_pred ---------------------------------------------ccCCchhhhhhhhhhhcccccccCCCCCCCCcchh
Q psy17283 50 ---------------------------------------------VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKEL 84 (635)
Q Consensus 50 ---------------------------------------------~~~g~~~~~~~~~~~~e~it~~LY~~d~~~~g~~l 84 (635)
|+.|+|..++.+...+++||++|||+|++++||+|
T Consensus 248 ~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lRLW~a~~~~~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeL 327 (879)
T 1ygp_A 248 ASQWIGGERVLAVAYDFPVPGFKTSNVNNLRLWQARPTTEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKEL 327 (879)
T ss_dssp CCEEECSEEEEEEEEEEEEECSSCCCEEEEEEEEEEESCSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHH
T ss_pred eeEeeCCcEEEEEEccccccCcCCCceEEEEEEEeccCcccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhh
Confidence 24567777788888999999999999999999999
Q ss_pred hhhhhHHHhhhHHHHHHHHHHhcccccccccccccccCCCceeEEeCCcchhhhHHHHHHHhHHhhCCCHHHHHHHhhcc
Q psy17283 85 RLKQEYFMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKT 164 (635)
Q Consensus 85 Rl~Qe~~l~~~~~~~ii~~~~~~~~g~~~~~~~~~~~~p~~~~~~lNd~Hpal~i~el~r~l~d~~g~~w~~a~~~~~~~ 164 (635)
||+|||||||||+|||||+|++.. | +|+.+|++++||||||||++++|||||+|+|++|++|++||++|+++
T Consensus 328 RLkQEyfl~sa~lqdilr~~~~~~-~-------~l~~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t 399 (879)
T 1ygp_A 328 RLKQQYFWCAASLHDILRRFKKSK-R-------PWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKT 399 (879)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-C-------CGGGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred heehhhhhhhhHHHHHHHHHHHhC-C-------ChhhcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHh
Confidence 999999999999999999997643 2 58888999999999999999999999999999999999999999999
Q ss_pred cceecccccccccccCCHHHHHhhhhhhHHHHHhhccccc----------------------------------------
Q psy17283 165 CAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHL---------------------------------------- 204 (635)
Q Consensus 165 ~~~t~HT~~~e~~e~~~~~l~~~~lpr~~~ii~~~n~~~~---------------------------------------- 204 (635)
|+||||||+|||||+||+++++++||||++||++||.+|+
T Consensus 400 ~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein~~f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~v~MA~LAi~~S~ 479 (879)
T 1ygp_A 400 FAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFFLEDVAKKFPKDVDLLSRISIIEENSPERQIRMAFLAIVGSH 479 (879)
T ss_dssp EEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCTHHHHHHCSEECCSSSCEEEHHHHHHHHEE
T ss_pred eeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHHHHHHHHHHHHcCCCHHHHHhcceeccCCCcceeehHHHHHHhcC
Confidence 9999999999999999999999999999999999988643
Q ss_pred --------------------------------------------------------------------------------
Q psy17283 205 -------------------------------------------------------------------------------- 204 (635)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (635)
T Consensus 480 ~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~ 559 (879)
T 1ygp_A 480 KVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVE 559 (879)
T ss_dssp EEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGG
T ss_pred ceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcCCCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCC
Confidence
Q ss_pred ---------------------------------------------cccccccccchhhchhhHHHHHHHHHcC------C
Q psy17283 205 ---------------------------------------------QVKRIHEYKRQLLNALHIITLYNRIKKN------P 233 (635)
Q Consensus 205 ---------------------------------------------~~rR~heYKRq~Lnil~~~~ry~~i~~~------~ 233 (635)
|||||||||||+||+|++++||.+||++ |
T Consensus 560 D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p 639 (879)
T 1ygp_A 560 DKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASI 639 (879)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCC
Confidence 9999999999999999999999999999 8
Q ss_pred CCC---CCCeEEEEeecCCCCCHHHHHHHHHHHHHHHHHcCCcCcCCcceEEEE--------------------------
Q psy17283 234 KGK---FTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFL-------------------------- 284 (635)
Q Consensus 234 ~~~---~~p~~~IfaGKA~P~y~~ak~iIk~I~~~a~~innd~~i~~~lkvvfl-------------------------- 284 (635)
+.. ++|+||||||||||+|.+||.|||+|+++|++|||||.++++||||||
T Consensus 640 ~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~ 719 (879)
T 1ygp_A 640 EEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGT 719 (879)
T ss_dssp HHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTC
T ss_pred cccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCc
Confidence 644 799999999999999999999999999999999999999999999999
Q ss_pred -----------ecCceeeccccCccHHHHHhhcCcceeecCCchhhHHHHHHcCCCCcccccCChhHHHHHHhhhcCCCC
Q psy17283 285 -----------LNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFS 353 (635)
Q Consensus 285 -----------~NG~l~l~tlDG~~~E~~~~vG~eN~~~fG~~~~ev~~l~~~gy~~~~~Y~~~~~l~~vld~L~dG~fs 353 (635)
||||||||||||||+|++++||+||+|+||.+++||.++++.| |+++|+.+|++++|+|+|.+|+|+
T Consensus 720 EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~--~~~~y~~~~~l~~v~d~i~~g~f~ 797 (879)
T 1ygp_A 720 EASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNVFLFGNLSENVEELRYNH--QYHPQDLPSSLDSVLSYIESGQFS 797 (879)
T ss_dssp CSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCGGGSEEESCCHHHHHHHHHHH--HHSCCCCCHHHHHHHHHTC--CCC
T ss_pred cccCchhhHHHHcCCeeeecccchhHHHHHHcCcccEEEccCCHHHHHHHHHhC--chhccCCCHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999999999999999999988 999999999999999999999999
Q ss_pred CCCchhhHHHHHHhhc-CCCCCCC
Q psy17283 354 PENPDEFKDLSDILLK-WDSENPI 376 (635)
Q Consensus 354 ~~~pe~fr~L~~~Ll~-~D~~~~L 376 (635)
+++|+.|++|+++|+. +|+|+.+
T Consensus 798 ~~~~~~f~~l~~~L~~~~D~y~vl 821 (879)
T 1ygp_A 798 PENPNEFKPLVDSIKYHGDYYLVS 821 (879)
T ss_dssp TTSTTTTHHHHHHHHHSTTTTCHH
T ss_pred CCChHHHHHHHHHHhcCCCeEEEe
Confidence 9999999999999985 5776544
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=2.4e-111 Score=967.80 Aligned_cols=375 Identities=72% Similarity=1.161 Sum_probs=348.0
Q ss_pred CccccchhhhhhcCCCeEEEeeccCCCceeEEeeCCeeeccCcchhhh--------------------------------
Q psy17283 2 RLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRY-------------------------------- 49 (635)
Q Consensus 2 rLA~~~l~s~a~l~~p~~g~gl~Y~~G~f~Q~i~~g~Q~e~~~~wl~~-------------------------------- 49 (635)
||||||||||||||+|++||||||+||||+|+|+||||+|.||+|++.
T Consensus 127 rLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~~w~~ 206 (824)
T 2gj4_A 127 RLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVD 206 (824)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEETTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSEEEES
T ss_pred HHHHHHHHHHHhCCCCeEEEeecccCCCeeEEeeCCEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCCceecc
Confidence 899999999999999999999999999999999999999999988431
Q ss_pred ---------------------------------------ccCCchhhhhhhhhhhcccccccCCCCCCCCcchhhhhhhH
Q psy17283 50 ---------------------------------------VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEY 90 (635)
Q Consensus 50 ---------------------------------------~~~g~~~~~~~~~~~~e~it~~LY~~d~~~~g~~lRl~Qe~ 90 (635)
||.|+|..|+++++.+||||++|||+|++++||++||+|||
T Consensus 207 ~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~~~~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qey 286 (824)
T 2gj4_A 207 TQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEY 286 (824)
T ss_dssp CEEEEEEEEEEEEECSSSSCEEEEEEEEEECCC----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHH
T ss_pred cceEEEeeccCCcCCCCCCceEEEEEEEeecCcccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhh
Confidence 57999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHhcccccccccccccccCCCceeEEeCCcchhhhHHHHHHHhHHhhCCCHHHHHHHhhcccceecc
Q psy17283 91 FMCAATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNH 170 (635)
Q Consensus 91 ~l~~~~~~~ii~~~~~~~~g~~~~~~~~~~~~p~~~~~~lNd~Hpal~i~el~r~l~d~~g~~w~~a~~~~~~~~~~t~H 170 (635)
||||||+|||||+|++...|.....+.+++.+|++++||+|||||++++|||||+|+|++|++|++||++|+++++||||
T Consensus 287 f~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~H 366 (824)
T 2gj4_A 287 FVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNH 366 (824)
T ss_dssp HHHHHHHHHHHHHHHC-----------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECC
T ss_pred hhhhhHHHHHHHHHHHhccccccccccchhhcCCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeC
Confidence 99999999999999765323211112368889999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCHHHHHhhhhhhHHHHHhhccccc----------------------------------------------
Q psy17283 171 TVLPEALERWPVTLMENLLPRHMQIIYHINFLHL---------------------------------------------- 204 (635)
Q Consensus 171 T~~~e~~e~~~~~l~~~~lpr~~~ii~~~n~~~~---------------------------------------------- 204 (635)
|++|+|+|+||.++++++||||++||++||.+|+
T Consensus 367 Tl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~~i~~~~~~~vnMa~lai~~S~~VNgVS~ 446 (824)
T 2gj4_A 367 TVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVAR 446 (824)
T ss_dssp CCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSH
T ss_pred CChHHHhhhchHHHHHHhCchHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhhhhhcCCCcccHHHHHHHhcCceeeEcH
Confidence 9999999999999999999999999988888732
Q ss_pred --------------------------------------------------------------------------------
Q psy17283 205 -------------------------------------------------------------------------------- 204 (635)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (635)
T Consensus 447 lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~ 526 (824)
T 2gj4_A 447 IHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKV 526 (824)
T ss_dssp HHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHH
T ss_pred HHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHH
Confidence
Q ss_pred ----------------------------cccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHHHH
Q psy17283 205 ----------------------------QVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAK 256 (635)
Q Consensus 205 ----------------------------~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~ak 256 (635)
|||||||||||+||+|++++||.+|+++|+..++|+||||||||||+|.+||
T Consensus 527 K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK 606 (824)
T 2gj4_A 527 KQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAK 606 (824)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHH
Confidence 9999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcCcCCcceEEEE-------------------------------------ecCceeeccccCccH
Q psy17283 257 KIIKLICSVARVVNNDPDVGDKLKVVFL-------------------------------------LNGALTIGTLDGANV 299 (635)
Q Consensus 257 ~iIk~I~~~a~~innd~~i~~~lkvvfl-------------------------------------~NG~l~l~tlDG~~~ 299 (635)
+|||+|+++|+++||||.++++|||||+ |||+|||||+||||+
T Consensus 607 ~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanv 686 (824)
T 2gj4_A 607 MIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANV 686 (824)
T ss_dssp HHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHH
T ss_pred HHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccc
Confidence 9999999999999999999999999999 999999999999999
Q ss_pred HHHHhhcCcceeecCCchhhHHHHHHcCCCCcccccCChhHHHHHHhhhcCCCCCCCchhhHHHHHHhhcCCCCCCC
Q psy17283 300 EMAEEMGNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPI 376 (635)
Q Consensus 300 E~~~~vG~eN~~~fG~~~~ev~~l~~~gy~~~~~Y~~~~~l~~vld~L~dG~fs~~~pe~fr~L~~~Ll~~D~~~~L 376 (635)
|++++||++|||+||.+++++..+++.+|+|.++|+.+|+++++++++.+|+|+.+.|+.|.+|+++|+.+|+|+.+
T Consensus 687 Ei~e~vG~~Ngf~FG~~~~ev~~l~~~~~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~~D~~~~~ 763 (824)
T 2gj4_A 687 EMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVF 763 (824)
T ss_dssp HHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHHCCTTCTG
T ss_pred hhhhccCCCCEEEeCCcHHHHHHHHHcCCCHHHHhcCCHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHcCChhhhh
Confidence 99999999999999999999988888999999999999999999999999999999999999999999988887666
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=1.6e-108 Score=941.67 Aligned_cols=366 Identities=55% Similarity=0.915 Sum_probs=346.9
Q ss_pred CccccchhhhhhcCCCeEEEeeccCCCceeEEeeCCeeeccCcchhhh--------------------------------
Q psy17283 2 RLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRY-------------------------------- 49 (635)
Q Consensus 2 rLA~~~l~s~a~l~~p~~g~gl~Y~~G~f~Q~i~~g~Q~e~~~~wl~~-------------------------------- 49 (635)
||||||||||||||+|++||||||+||||+|+|.||||+|.||+|++.
T Consensus 117 rLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~w~~~~~ 196 (796)
T 1l5w_A 117 RLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFT 196 (796)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECTTSCEECSEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEecCccccCCCcceeecCCcEEEEeeCCEEeecceecCCce
Confidence 899999999999999999999999999999999999999999988652
Q ss_pred ------------------------------------ccCCchhhhhhhhhhhcccccccCCCCCCCCcchhhhhhhHHHh
Q psy17283 50 ------------------------------------VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMC 93 (635)
Q Consensus 50 ------------------------------------~~~g~~~~~~~~~~~~e~it~~LY~~d~~~~g~~lRl~Qe~~l~ 93 (635)
|+.|+|..++.++..+++||++|||+|++++||++||+||||||
T Consensus 197 v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~ 276 (796)
T 1l5w_A 197 ITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQC 276 (796)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEEECSSCCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEEecccccCCCCCceEEEEEEEeccCcccChhhcCCccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHH
Confidence 35678888888999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcccccccccccccccCCCceeEEeCCcchhhhHHHHHHHhHHhhCCCHHHHHHHhhcccceeccccc
Q psy17283 94 AATLQDIIRRFRTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVL 173 (635)
Q Consensus 94 ~~~~~~ii~~~~~~~~g~~~~~~~~~~~~p~~~~~~lNd~Hpal~i~el~r~l~d~~g~~w~~a~~~~~~~~~~t~HT~~ 173 (635)
+||+|+|+|+|++.. + +++.+|++++||+|||||++++|||||+|+|++|++|++||++++++++|||||++
T Consensus 277 ~a~lq~ilr~~~~~~-~-------~~~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~ 348 (796)
T 1l5w_A 277 ACSVADILRRHHLAG-R-------KLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLM 348 (796)
T ss_dssp HHHHHHHHHHHHHTT-C-------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCS
T ss_pred HHHHHHHHHHHHHcC-C-------ChhhcCCccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCc
Confidence 999999999997543 2 46677789999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCHHHHHhhhhhhHHHHHhhccccc-------------------------------------------------
Q psy17283 174 PEALERWPVTLMENLLPRHMQIIYHINFLHL------------------------------------------------- 204 (635)
Q Consensus 174 ~e~~e~~~~~l~~~~lpr~~~ii~~~n~~~~------------------------------------------------- 204 (635)
|+|+|+||+++++++||||++|+.+||.+|+
T Consensus 349 ~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~i 428 (796)
T 1l5w_A 349 PEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLV 428 (796)
T ss_dssp GGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHH
T ss_pred HhhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHH
Confidence 9999999999999999999999999888542
Q ss_pred --------------------------------------------------------------------------------
Q psy17283 205 -------------------------------------------------------------------------------- 204 (635)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (635)
T Consensus 429 k~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~ 508 (796)
T 1l5w_A 429 VKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKV 508 (796)
T ss_dssp HHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHH
T ss_pred HhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence
Q ss_pred ----------------------cccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHHHHHHHHHH
Q psy17283 205 ----------------------QVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLI 262 (635)
Q Consensus 205 ----------------------~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~ak~iIk~I 262 (635)
|||||||||||+||+|++++||.+||++|+..++|+||||||||||+|++||.|||+|
T Consensus 509 ~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i 588 (796)
T 1l5w_A 509 RLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAI 588 (796)
T ss_dssp HHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcCcCCcceEEEE-------------------------------------ecCceeeccccCccHHHHHhh
Q psy17283 263 CSVARVVNNDPDVGDKLKVVFL-------------------------------------LNGALTIGTLDGANVEMAEEM 305 (635)
Q Consensus 263 ~~~a~~innd~~i~~~lkvvfl-------------------------------------~NG~l~l~tlDG~~~E~~~~v 305 (635)
+++|++|||||.++++|||||+ |||+||||||||||+|+.++|
T Consensus 589 ~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~v 668 (796)
T 1l5w_A 589 NKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKV 668 (796)
T ss_dssp HHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHH
T ss_pred HHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhcc
Confidence 9999999999999999999999 999999999999999999999
Q ss_pred cCcceeecCCchhhHHHHHHcCCCCcccccCChhHHHHHHhhhcCCCCCCCchhhHHHHHHhhc--CCCCCC
Q psy17283 306 GNDNIFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLK--WDSENP 375 (635)
Q Consensus 306 G~eN~~~fG~~~~ev~~l~~~gy~~~~~Y~~~~~l~~vld~L~dG~fs~~~pe~fr~L~~~Ll~--~D~~~~ 375 (635)
|++|||+||.++++|.++++.+|+|.++|+.+|+++++++++.+|+||.+.|+.|++|+++|+. +|+|+.
T Consensus 669 G~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~~~D~~~v 740 (796)
T 1l5w_A 669 GEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYLV 740 (796)
T ss_dssp CGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHHHTSTTTCCTTCH
T ss_pred CCCcEEEecCCHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHhccCCCceee
Confidence 9999999999999999999999999999999999999999999999999999999999998875 466533
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=5.3e-108 Score=937.51 Aligned_cols=359 Identities=47% Similarity=0.812 Sum_probs=342.6
Q ss_pred CccccchhhhhhcCCCeEEEeeccCCCceeEEeeCCeeeccCcchhhh--------------------------------
Q psy17283 2 RLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRY-------------------------------- 49 (635)
Q Consensus 2 rLA~~~l~s~a~l~~p~~g~gl~Y~~G~f~Q~i~~g~Q~e~~~~wl~~-------------------------------- 49 (635)
||||||||||||||+|++||||||+||||+|+|.||||+|.|++|++.
T Consensus 118 rLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~~yd~pi~ 197 (796)
T 2c4m_A 118 RLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRAIPYDMPIT 197 (796)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEEEEEecccc
Confidence 899999999999999999999999999999999999999999999764
Q ss_pred -------------------------ccCCchhhhhhhhhhhcccccccCCCCCCCCcchhhhhhhHHHhhhHHHHHHHHH
Q psy17283 50 -------------------------VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRF 104 (635)
Q Consensus 50 -------------------------~~~g~~~~~~~~~~~~e~it~~LY~~d~~~~g~~lRl~Qe~~l~~~~~~~ii~~~ 104 (635)
|+.|+|..++.++..+++||++|||+|++++||++||+||||||+||+|+|+|+|
T Consensus 198 gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~ 277 (796)
T 2c4m_A 198 GYGTHNVGTLRLWKAEPWEEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDH 277 (796)
T ss_dssp CTTCCCCEEEEEEEEEESSSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCceEEEEEEecccccccchhhccCcchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999
Q ss_pred HhcccccccccccccccCCCceeEEeCCcchhhhHHHHHHHhHHhhCCCHHHHHHHhhcccceecccccccccccCCHHH
Q psy17283 105 RTSKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEALERWPVTL 184 (635)
Q Consensus 105 ~~~~~g~~~~~~~~~~~~p~~~~~~lNd~Hpal~i~el~r~l~d~~g~~w~~a~~~~~~~~~~t~HT~~~e~~e~~~~~l 184 (635)
++.. | +++.+|++++||+|||||++++|||||+|+|++|++|++||++++.+++|||||++|+|+|+||+++
T Consensus 278 ~~~~-~-------~l~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l 349 (796)
T 2c4m_A 278 LAHH-K-------DLSNFAEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQI 349 (796)
T ss_dssp HHHS-S-------CSTTHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHH
T ss_pred HHhC-C-------ChhhcCCCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHH
Confidence 7643 2 4777788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhHHHHHhhcccc------------------------c------------------------------------
Q psy17283 185 MENLLPRHMQIIYHINFLH------------------------L------------------------------------ 204 (635)
Q Consensus 185 ~~~~lpr~~~ii~~~n~~~------------------------~------------------------------------ 204 (635)
++++||||++|+..||.+| +
T Consensus 350 ~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~ 429 (796)
T 2c4m_A 350 FQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALW 429 (796)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHC
T ss_pred HHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcC
Confidence 9999999999888776521 0
Q ss_pred --------------------------------------------------------------------------------
Q psy17283 205 -------------------------------------------------------------------------------- 204 (635)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (635)
T Consensus 430 p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~G 509 (796)
T 2c4m_A 430 PEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQG 509 (796)
T ss_dssp GGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence
Q ss_pred -----------cccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHHHHHHHHHHHHHHHHHcCCc
Q psy17283 205 -----------QVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDP 273 (635)
Q Consensus 205 -----------~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~ak~iIk~I~~~a~~innd~ 273 (635)
|||||||||||+||+|++++||.+||++|+..++|+||||||||||+|++||.|||+|+++|++|||||
T Consensus 510 l~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp 589 (796)
T 2c4m_A 510 IEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDP 589 (796)
T ss_dssp CCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCcceEEEE-------------------------------------ecCceeeccccCccHHHHHhhcCcceeecCCc
Q psy17283 274 DVGDKLKVVFL-------------------------------------LNGALTIGTLDGANVEMAEEMGNDNIFIFGMT 316 (635)
Q Consensus 274 ~i~~~lkvvfl-------------------------------------~NG~l~l~tlDG~~~E~~~~vG~eN~~~fG~~ 316 (635)
.++++|||||+ |||+||||||||||+|+.++||++|||+||.+
T Consensus 590 ~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~ 669 (796)
T 2c4m_A 590 EVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGAR 669 (796)
T ss_dssp TTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCC
T ss_pred ccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCc
Confidence 99999999999 99999999999999999999999999999999
Q ss_pred hhhHHHHHHcCCCCcccccCChhHHHHHHhhhcCCCCCCCchhhHHHHHHhhc
Q psy17283 317 VDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLK 369 (635)
Q Consensus 317 ~~ev~~l~~~gy~~~~~Y~~~~~l~~vld~L~dG~fs~~~pe~fr~L~~~Ll~ 369 (635)
++++.++++. |+|.++|+.+|+++++++++.+|+||.+.|+.|++|+++|+.
T Consensus 670 ~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 670 VEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNSGLFYDLKHSLIH 721 (796)
T ss_dssp TTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTCCHHHHHHHHHHS
T ss_pred hhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHh
Confidence 9999999999 999999999999999999999999999999999999999874
No 5
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=2.7e-60 Score=542.17 Aligned_cols=236 Identities=45% Similarity=0.770 Sum_probs=227.8
Q ss_pred HHHHhhhcCCCCCCCchhhHHHHHHhhcCCCCCCCChHHHHHHhhhccccccccccchhhccCChHHHHhhhhhHHHHHH
Q psy17283 342 LVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIY 421 (635)
Q Consensus 342 ~vld~L~dG~fs~~~pe~fr~L~~~Ll~~D~~~~L~~~~A~~iv~~~~~fTtHTpvpeglE~f~~~L~~~~lpr~~~ii~ 421 (635)
.++.|||+||++...||++|.|++. ++++|++||++|+++|+||||||||||||+||++||+++||||++||+
T Consensus 360 ~~~ihlNDtHpalai~ELmR~L~d~-------~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ 432 (879)
T 1ygp_A 360 QVAIQLNDTHPTLAIVELQRVLVDL-------EKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIY 432 (879)
T ss_dssp HEEEEEESSTTTHHHHHHHHHHHHT-------TCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHH
T ss_pred ceEEEccCCcHHHHHHHHHHHHhhh-------cCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHH
Confidence 6778999999999999999998775 679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHhccccccCCC-CeeehhhhchhhcchhHhHHHHhHhhhhhhhhhhhhccCCC-cccee
Q psy17283 422 HINFLHLQNVLAKFPNDLDRMRRMSLIEEDGD-KRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPE-KFQNK 499 (635)
Q Consensus 422 ~in~~f~~~~~~~~~~d~~~~~~l~ii~~~~~-~~~~Ma~Lal~~S~~vNGVS~LH~ev~k~~mf~~~~~~~p~-ki~~i 499 (635)
+||.+|++.+..++|.|.+++.+||+++++++ ++||||+||+++||+|||||+||++|+|+.||++||++||+ ||+||
T Consensus 433 ein~~f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~ 512 (879)
T 1ygp_A 433 DINWFFLEDVAKKFPKDVDLLSRISIIEENSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNV 512 (879)
T ss_dssp HHHHHHHHHHHHHSTTCTHHHHHHCSEECCSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHhcceeccCCCcceeehHHHHHHhcCceeEehHHHHHHHHHHHhHHHHHhCCCCcccCc
Confidence 99999999999999999999999999976544 68999999999999999999999999998999999999999 99999
Q ss_pred ccCccccccccccChhHHHHHHhHhC---chhhhChhHHHHHHhhhCChHhHHHHHHHHHHHHHHHHHHHHHHh-CCCcC
Q psy17283 500 TNGITPRRWLLLCNPSLADVIAEKIG---EDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEY-HIKVN 575 (635)
Q Consensus 500 TNGVh~rrWl~~~np~l~~L~~~~ig---~~W~~~~~~l~~l~~~~~d~~~~~el~~~k~~~K~~Li~~i~~~~-g~~i~ 575 (635)
|||||+|||+.+|||+|++||+++|| ++|.+++++|++|+++++|+.|.++||++|++||++|++||++++ |+.+|
T Consensus 513 TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld 592 (879)
T 1ygp_A 513 TNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDII 592 (879)
T ss_dssp CCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCS
T ss_pred CCCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEec
Confidence 99999999999999999999999999 899999999999999999999999999999999999999999999 99999
Q ss_pred -----CCcceeccc
Q psy17283 576 -----AASIFDMQN 584 (635)
Q Consensus 576 -----p~slfDvq~ 584 (635)
|++|||+|.
T Consensus 593 ~~~~~p~sLfdvq~ 606 (879)
T 1ygp_A 593 NREYLDDTLFDMQV 606 (879)
T ss_dssp CSTTGGGCEEEEEE
T ss_pred CCCCCCCeeeeeee
Confidence 999999983
No 6
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=3.2e-50 Score=462.19 Aligned_cols=235 Identities=62% Similarity=1.014 Sum_probs=225.8
Q ss_pred HHHHhhhcCCCCCCCchhhHHHHHHhhcCCCCCCCChHHHHHHhhhccccccccccchhhccCChHHHHhhhhhHHHHHH
Q psy17283 342 LVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIY 421 (635)
Q Consensus 342 ~vld~L~dG~fs~~~pe~fr~L~~~Ll~~D~~~~L~~~~A~~iv~~~~~fTtHTpvpeglE~f~~~L~~~~lpr~~~ii~ 421 (635)
.++.|++|+|++...||++|.+++. ++++|++||++|+++|+||||||+|||+|+||.+|++++||+|++||+
T Consensus 321 p~viHlNDtHpal~i~ElmR~l~d~-------~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~ 393 (824)
T 2gj4_A 321 KVAIQLNDTHPSLAIPELMRVLVDL-------ERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIY 393 (824)
T ss_dssp HEEEEEESSTTTTHHHHHHHHHHHT-------SCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHH
T ss_pred CcEEEccCCchHhHHHHHHHHHHHh-------cCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHH
Confidence 4566999999999999999887764 579999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHhccccccCCCCeeehhhhchhhcchhHhHHHHhHhhhhhhhhhhhhccCCCccceecc
Q psy17283 422 HINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTN 501 (635)
Q Consensus 422 ~in~~f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~Lal~~S~~vNGVS~LH~ev~k~~mf~~~~~~~p~ki~~iTN 501 (635)
+||.+|++.+...+|.|.+.+.+|++++++..+.||||+||+++|++|||||++|++++|+.||++||+.+|++|++|||
T Consensus 394 ~in~~f~~~~~~~~~~~~~~~~~~~~i~~~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTN 473 (824)
T 2gj4_A 394 EINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTN 473 (824)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCC
T ss_pred HHHHHHHHHHHHHcCCcHHHHHhhhhhhhcCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccC
Confidence 99999999999999999999999999987667899999999999999999999999999989999999999999999999
Q ss_pred CccccccccccChhHHHHHHhHhCchhhhChhHHHHHHhhhCChHhHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCccee
Q psy17283 502 GITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFD 581 (635)
Q Consensus 502 GVh~rrWl~~~np~l~~L~~~~ig~~W~~~~~~l~~l~~~~~d~~~~~el~~~k~~~K~~Li~~i~~~~g~~i~p~slfD 581 (635)
|||+|||+.+|||++++++++.||++|.++++++++|.++++|+.+.++++++|++||.+|++||++++|..+||+++||
T Consensus 474 GI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~ 553 (824)
T 2gj4_A 474 GITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFD 553 (824)
T ss_dssp CBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEE
T ss_pred CcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceE
Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred cc
Q psy17283 582 MQ 583 (635)
Q Consensus 582 vq 583 (635)
+|
T Consensus 554 g~ 555 (824)
T 2gj4_A 554 VQ 555 (824)
T ss_dssp EE
T ss_pred ee
Confidence 98
No 7
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=5.4e-50 Score=458.94 Aligned_cols=235 Identities=41% Similarity=0.716 Sum_probs=225.9
Q ss_pred HHHHHhhhcCCCCCCCchhhHHHHHHhhcCCCCCCCChHHHHHHhhhccccccccccchhhccCChHHHHhhhhhHHHHH
Q psy17283 341 KLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQII 420 (635)
Q Consensus 341 ~~vld~L~dG~fs~~~pe~fr~L~~~Ll~~D~~~~L~~~~A~~iv~~~~~fTtHTpvpeglE~f~~~L~~~~lpr~~~ii 420 (635)
+.++.|++|+|++...||++|.+++. ++++|++||++|+++|+||||||+|||+|+||.+||+++||+|++||
T Consensus 299 ~p~viHlNDtHpal~i~ElmR~l~d~-------~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii 371 (796)
T 1l5w_A 299 DYEVIQLNDTHPTIAIPELLRVLIDE-------HQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQII 371 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHH-------SCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHH
T ss_pred CccEEEecCCccHhHHHHHHHHHhhh-------cCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHH
Confidence 35677999999999999999988776 57999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHhccccccCCCCeeehhhhchhhcchhHhHHHHhHhhhhhhhhhhhhccCCCccceec
Q psy17283 421 YHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKT 500 (635)
Q Consensus 421 ~~in~~f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~Lal~~S~~vNGVS~LH~ev~k~~mf~~~~~~~p~ki~~iT 500 (635)
++||.+|++++...+|.|.+.+.+++++++ +.|||++||+++|++|||||++|++++|+.+|++|++++|++|++||
T Consensus 372 ~~I~~~f~~~~~~~~~~~~~~~~~~~i~~~---~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iT 448 (796)
T 1l5w_A 372 NEINTRFKTLVEKTWPGDEKVWAKLAVVHD---KQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVT 448 (796)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHCSEET---TEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECC
T ss_pred hccCHHHHHHHHHhcCCcHHHHhhhhcccC---CcccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCc
Confidence 999999999999999999999999999854 48999999999999999999999999999999999999999999999
Q ss_pred cCccccccccccChhHHHHHHhHhCchhhhChhHHHHHHhhhCChHhHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcce
Q psy17283 501 NGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIF 580 (635)
Q Consensus 501 NGVh~rrWl~~~np~l~~L~~~~ig~~W~~~~~~l~~l~~~~~d~~~~~el~~~k~~~K~~Li~~i~~~~g~~i~p~slf 580 (635)
||||+|||+.+|||++.++|++++|++|.+|++.+++|+++++|+.|.++||++|++||++|++||++++|..+||+++|
T Consensus 449 NGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~ 528 (796)
T 1l5w_A 449 NGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIF 528 (796)
T ss_dssp CCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEE
T ss_pred CCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccch
Q psy17283 581 DMQNQ 585 (635)
Q Consensus 581 Dvq~~ 585 (635)
|+|.+
T Consensus 529 ~~~vk 533 (796)
T 1l5w_A 529 DIQIK 533 (796)
T ss_dssp EEEES
T ss_pred Eeeee
Confidence 99965
No 8
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=2.2e-49 Score=453.90 Aligned_cols=234 Identities=37% Similarity=0.598 Sum_probs=224.0
Q ss_pred HHHHHhhhcCCCCCCCchhhHHHHHHhhcCCCCCCCChHHHHHHhhhccccccccccchhhccCChHHHHhhhhhHHHHH
Q psy17283 341 KLVVDQITNGFFSPENPDEFKDLSDILLKWDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQII 420 (635)
Q Consensus 341 ~~vld~L~dG~fs~~~pe~fr~L~~~Ll~~D~~~~L~~~~A~~iv~~~~~fTtHTpvpeglE~f~~~L~~~~lpr~~~ii 420 (635)
+.++.|++|+|++...||++|.+++. ++++|++||++|+++|+||||||+|||+|+||.+||+++||+|++||
T Consensus 289 ~p~viHlNDtHpal~i~ElmR~l~d~-------~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii 361 (796)
T 2c4m_A 289 EFHSVQLNDTHPVLAIPELMRLLMDE-------HDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEII 361 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHH-------SCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHH
T ss_pred CCeEEEeCCChHHhHHHHHHHHHhhh-------cCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHH
Confidence 35677999999999999999988776 57999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHhccccccCCCCeeehhhhchhhcchhHhHHHHhHhhhhhhhhhhhhccCCCccceec
Q psy17283 421 YHINFLHLQNVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKT 500 (635)
Q Consensus 421 ~~in~~f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~Lal~~S~~vNGVS~LH~ev~k~~mf~~~~~~~p~ki~~iT 500 (635)
++||.+|+.++... |.|.+++.+++++++ +.|||++||+++|++|||||++|++++|+.+|++|++.+|++|.+||
T Consensus 362 ~~I~~~~~~~~~~~-~~~~~~~~~~~i~~~---~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iT 437 (796)
T 2c4m_A 362 AEIDRRFRLERAAD-GLDEETINRMAPIQH---GTVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKT 437 (796)
T ss_dssp HHHHHHHHHHHHHT-TCCHHHHHHHCSEET---TEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECC
T ss_pred cCcCHHHHHHHHhc-CCcHhhhhcccceeC---CcccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCcccccccc
Confidence 99999999999999 999999999999854 48999999999999999999999999999999999999999999999
Q ss_pred cCccccccccccChhHHHHHHhHhC-chhhhChhHHHHHHhhhCChHhHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcc
Q psy17283 501 NGITPRRWLLLCNPSLADVIAEKIG-EDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASI 579 (635)
Q Consensus 501 NGVh~rrWl~~~np~l~~L~~~~ig-~~W~~~~~~l~~l~~~~~d~~~~~el~~~k~~~K~~Li~~i~~~~g~~i~p~sl 579 (635)
||||+|||+.+|||++.++|++++| ++|.+|+++|++|+++++|+.|.++||++|++||++|++||++++|+.+||+++
T Consensus 438 NGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l 517 (796)
T 2c4m_A 438 NGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESI 517 (796)
T ss_dssp CCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSE
T ss_pred CCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 9999999999999999999999999 899999999999999999999999999999999999999999999999999999
Q ss_pred eeccch
Q psy17283 580 FDMQNQ 585 (635)
Q Consensus 580 fDvq~~ 585 (635)
||+|.+
T Consensus 518 ~~~~vk 523 (796)
T 2c4m_A 518 FDVQIK 523 (796)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 999843
No 9
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=82.21 E-value=0.25 Score=54.89 Aligned_cols=59 Identities=17% Similarity=0.215 Sum_probs=42.9
Q ss_pred CCeeehhhhchhhcchhHhHHHHhHhhhhhhhhhhhh----ccCCCccceeccCccccccccccChhH
Q psy17283 453 DKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFY----ELTPEKFQNKTNGITPRRWLLLCNPSL 516 (635)
Q Consensus 453 ~~~~~Ma~Lal~~S~~vNGVS~LH~ev~k~~mf~~~~----~~~p~ki~~iTNGVh~rrWl~~~np~l 516 (635)
.+.+||-..++..|..|+.||.-+.+-.. +.+..-. .....++..|.|||+...| +|..
T Consensus 229 ~~~~n~~k~~i~~ad~v~tVS~~~a~ei~-~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~----~p~~ 291 (536)
T 3vue_A 229 GRKINWMKAGILEADRVLTVSPYYAEELI-SGIARGCELDNIMRLTGITGIVNGMDVSEW----DPSK 291 (536)
T ss_dssp EEEEEHHHHHHHHCSEEEESCHHHHHHHH-TTCCCCSSSCCCSCCCSCEECCCCCCTTTS----CTTT
T ss_pred ccchhHHHHHHHhccEEEEcCHHHhhhhh-cccccccccccccccCCeEEEECCcchhhc----CCCC
Confidence 35799999999999999999997765443 2232111 1234569999999999999 5653
No 10
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=68.28 E-value=5.6 Score=44.01 Aligned_cols=93 Identities=18% Similarity=0.143 Sum_probs=58.5
Q ss_pred cccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHHHHHHHHHHHHHHHHHcCCcCcCCc------
Q psy17283 205 QVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDK------ 278 (635)
Q Consensus 205 ~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~ak~iIk~I~~~a~~innd~~i~~~------ 278 (635)
++-|+.++|...+ ++..+.++ ++. ..++++.|...+.+. . .+...+...+....+.+.
T Consensus 332 ~vgRl~~~Kg~~~-li~a~~~l---~~~------~~~l~l~G~G~~~~~---~---~~~~~~~~~~~~v~~~~~~~~~~~ 395 (536)
T 3vue_A 332 FIGRLEEQKGPDV-MAAAIPEL---MQE------DVQIVLLGTGKKKFE---K---LLKSMEEKYPGKVRAVVKFNAPLA 395 (536)
T ss_dssp EECCBSGGGCHHH-HHHHHHHH---TTS------SCEEEEECCBCHHHH---H---HHHHHHHHSTTTEEEECSCCHHHH
T ss_pred EEeeccccCChHH-HHHHHHHh---Hhh------CCeEEEEeccCchHH---H---HHHHHHhhcCCceEEEEeccHHHH
Confidence 8999999999999 77777655 221 235677775433222 2 222333332222222111
Q ss_pred ---ce--EEEE----------------ecCceeeccccCccHHHHHhhcCcceeecCC
Q psy17283 279 ---LK--VVFL----------------LNGALTIGTLDGANVEMAEEMGNDNIFIFGM 315 (635)
Q Consensus 279 ---lk--vvfl----------------~NG~l~l~tlDG~~~E~~~~vG~eN~~~fG~ 315 (635)
++ -+|+ ..|.+.|+|--|+..|+..+ ++|||.++.
T Consensus 396 ~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~d--g~~G~~~~~ 451 (536)
T 3vue_A 396 HLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIE--GKTGFHMGR 451 (536)
T ss_dssp HHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCB--TTTEEECCC
T ss_pred HHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeC--CCCcccccc
Confidence 00 0333 88999999999999999887 899998874
No 11
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=31.63 E-value=69 Score=32.86 Aligned_cols=102 Identities=13% Similarity=0.156 Sum_probs=57.4
Q ss_pred ccccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHHHHHHHHHHHHHHHHHcCCcCcCCcc----
Q psy17283 204 LQVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKL---- 279 (635)
Q Consensus 204 ~~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~ak~iIk~I~~~a~~innd~~i~~~l---- 279 (635)
+++-|+.+.|...+ ++..+.++. +..|+ ....+++.|...+.......+.+++.++. +.+...+.|.+
T Consensus 247 ~~~G~~~~~Kg~~~-li~a~~~l~--~~~p~---~~~~l~i~G~~~~~g~~~~~l~~~~~~~~--l~~~v~~~g~~~~~~ 318 (438)
T 3c48_A 247 AFVGRLQPFKGPQV-LIKAVAALF--DRDPD---RNLRVIICGGPSGPNATPDTYRHMAEELG--VEKRIRFLDPRPPSE 318 (438)
T ss_dssp EEESCBSGGGCHHH-HHHHHHHHH--HHCTT---CSEEEEEECCBC------CHHHHHHHHTT--CTTTEEEECCCCHHH
T ss_pred EEEeeecccCCHHH-HHHHHHHHH--hhCCC---cceEEEEEeCCCCCCcHHHHHHHHHHHcC--CCCcEEEcCCCChHH
Confidence 38889999998887 666665542 23332 24788888874331122233334433322 11111222221
Q ss_pred -----eE--EEE----------------ecCceeeccccCccHHHHHhhcCcceeecCC
Q psy17283 280 -----KV--VFL----------------LNGALTIGTLDGANVEMAEEMGNDNIFIFGM 315 (635)
Q Consensus 280 -----kv--vfl----------------~NG~l~l~tlDG~~~E~~~~vG~eN~~~fG~ 315 (635)
+. +|+ ..|.+.|+|-.|+..|+.++ ++||+++..
T Consensus 319 ~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~--~~~g~~~~~ 375 (438)
T 3c48_A 319 LVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAE--GETGLLVDG 375 (438)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCB--TTTEEEESS
T ss_pred HHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhC--CCcEEECCC
Confidence 00 233 78999999988888887765 678888864
No 12
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=30.35 E-value=4.2e+02 Score=28.89 Aligned_cols=60 Identities=8% Similarity=0.072 Sum_probs=35.4
Q ss_pred cccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHH-HHHHHHHHHHHHHHHc
Q psy17283 205 QVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYT-AKKIIKLICSVARVVN 270 (635)
Q Consensus 205 ~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~-ak~iIk~I~~~a~~in 270 (635)
.+-|+..-|-... +|.-. ++ +++.|+.. .+++|..|.+..++.. -.++-+.+.+++..||
T Consensus 286 ~VgRLd~~KGi~~-lL~Af-~l--l~~~P~~~--~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in 346 (496)
T 3t5t_A 286 HSGRTDPIKNAER-AVRAF-VL--AARGGGLE--KTRMLVRMNPNRLYVPANADYVHRVETAVAEAN 346 (496)
T ss_dssp EEEESSGGGCHHH-HHHHH-HH--HHHTSSCT--TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHH
T ss_pred EcccCccccCHHH-HHHHH-HH--HHhCcccc--eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhc
Confidence 4556666665554 45444 44 45677643 5667666655555533 3466677777777766
No 13
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=29.35 E-value=40 Score=30.48 Aligned_cols=27 Identities=15% Similarity=0.209 Sum_probs=19.3
Q ss_pred ecCceeeccccCccHHHHHhhcCcceeec
Q psy17283 285 LNGALTIGTLDGANVEMAEEMGNDNIFIF 313 (635)
Q Consensus 285 ~NG~l~l~tlDG~~~E~~~~vG~eN~~~f 313 (635)
..|.+.|+|-.|+..|+.++ +++|+++
T Consensus 119 a~G~PvI~~~~~~~~e~i~~--~~~g~~~ 145 (177)
T 2f9f_A 119 ASGKPVIAVNEGGFKETVIN--EKTGYLV 145 (177)
T ss_dssp HTTCCEEEESSHHHHHHCCB--TTTEEEE
T ss_pred HcCCcEEEeCCCCHHHHhcC--CCccEEe
Confidence 67888888877666666554 6677777
No 14
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=27.93 E-value=94 Score=31.69 Aligned_cols=105 Identities=18% Similarity=0.172 Sum_probs=60.9
Q ss_pred cccccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHHHHH-HHHHHHHHHHHHcCCcCcCC----
Q psy17283 203 HLQVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKK-IIKLICSVARVVNNDPDVGD---- 277 (635)
Q Consensus 203 ~~~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~ak~-iIk~I~~~a~~innd~~i~~---- 277 (635)
.+++-|+.+.|...+ ++..+..+.+ ..| +..+++.|.....+....+ +-+++..+.. .+...+.|
T Consensus 234 i~~vGrl~~~Kg~~~-li~a~~~l~~--~~~-----~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~--~~~V~~~G~~~~ 303 (416)
T 2x6q_A 234 ITQVSRFDPWKGIFD-VIEIYRKVKE--KIP-----GVQLLLVGVMAHDDPEGWIYFEKTLRKIGE--DYDVKVLTNLIG 303 (416)
T ss_dssp EEEECCCCTTSCHHH-HHHHHHHHHH--HCT-----TCEEEEEECCCTTCHHHHHHHHHHHHHHTT--CTTEEEEEGGGT
T ss_pred EEEEeccccccCHHH-HHHHHHHHHH--hCC-----CeEEEEEecCcccchhHHHHHHHHHHHhCC--CCcEEEecccCC
Confidence 348899999999887 7666655532 233 3678888876543333222 2222222211 11112222
Q ss_pred --------cceE--EEE----------------ecCceeeccccCccHHHHHhhcCcceeecCCchhhH
Q psy17283 278 --------KLKV--VFL----------------LNGALTIGTLDGANVEMAEEMGNDNIFIFGMTVDQV 320 (635)
Q Consensus 278 --------~lkv--vfl----------------~NG~l~l~tlDG~~~E~~~~vG~eN~~~fG~~~~ev 320 (635)
+++. +|+ .-|.+.++|-.|+..|+..+ +++|+++. +.+++
T Consensus 304 ~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~--~~~g~l~~-d~~~l 369 (416)
T 2x6q_A 304 VHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVD--GETGFLVR-DANEA 369 (416)
T ss_dssp CCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCB--TTTEEEES-SHHHH
T ss_pred CCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheec--CCCeEEEC-CHHHH
Confidence 1111 333 78999999988877777765 77999987 54443
No 15
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=24.02 E-value=1.3e+02 Score=35.23 Aligned_cols=101 Identities=13% Similarity=0.080 Sum_probs=65.8
Q ss_pred cccccccccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCC---CCHHHHHHHHHHHHHHHHHcCC--cCcCC--
Q psy17283 205 QVKRIHEYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAP---GYYTAKKIIKLICSVARVVNND--PDVGD-- 277 (635)
Q Consensus 205 ~~rR~heYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P---~y~~ak~iIk~I~~~a~~innd--~~i~~-- 277 (635)
++-|+.++|...+ ++..+.++.+... +..+++.|...+ .+...++....+.++++..+-. ..+.|
T Consensus 577 ~vGRl~~~KGid~-LIeA~~~L~~~~~-------~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 577 TMARLDRVKNLSG-LVEWYGKNTRLRE-------LANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp EECCCCTTTTHHH-HHHHHHHCHHHHH-------HCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred EEccCcccCCHHH-HHHHHHHHHhhCC-------CeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 8899999999988 7776666543221 246777776552 3444455555555555554321 11222
Q ss_pred -----------cce---EEEE----------------ecCceeeccccCccHHHHHhhcCcceeecCC
Q psy17283 278 -----------KLK---VVFL----------------LNGALTIGTLDGANVEMAEEMGNDNIFIFGM 315 (635)
Q Consensus 278 -----------~lk---vvfl----------------~NG~l~l~tlDG~~~E~~~~vG~eN~~~fG~ 315 (635)
++. -||+ .-|.+.++|-.|+..|+..+ ++||+++..
T Consensus 649 ~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~d--g~~Gllv~p 714 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVH--GKSGFHIDP 714 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCB--TTTBEEECT
T ss_pred cccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHcc--CCcEEEeCC
Confidence 111 2555 88999999999999998875 889999875
No 16
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=23.55 E-value=50 Score=38.09 Aligned_cols=80 Identities=13% Similarity=0.229 Sum_probs=59.9
Q ss_pred CeeehhhhchhhcchhHhHHHHhHhhhhhhhhhhhhccCCCccceeccCccccccccccChhHHHHHHhHhCchhhhChh
Q psy17283 454 KRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLE 533 (635)
Q Consensus 454 ~~~~Ma~Lal~~S~~vNGVS~LH~ev~k~~mf~~~~~~~p~ki~~iTNGVh~rrWl~~~np~l~~L~~~~ig~~W~~~~~ 533 (635)
..++|-..+++.|..++.||....+-.+ . ++...|..+ |-|||....| +|.
T Consensus 249 ~~~~~EKaga~~AD~ITTVS~~yA~Ei~-~----Ll~r~~d~i--IpNGID~~~f----~p~------------------ 299 (725)
T 3nb0_A 249 HRYCIERAAAHSADVFTTVSQITAFEAE-H----LLKRKPDGI--LPNGLNVIKF----QAF------------------ 299 (725)
T ss_dssp HHHHHHHHHHHHSSEEEESSHHHHHHHH-H----HTSSCCSEE--CCCCBCCCCC----SST------------------
T ss_pred HHHHHHHHHHHhCCEEEECCHHHHHHHH-H----HhcCCCCEE--EcCCcccccc----Ccc------------------
Confidence 3578888899999999999997776665 4 334445556 8999999888 453
Q ss_pred HHHHHHhhhCChHhHHHHHHHHHHHHHHHHHHHHHHhCC--CcCCC
Q psy17283 534 QLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHI--KVNAA 577 (635)
Q Consensus 534 ~l~~l~~~~~d~~~~~el~~~k~~~K~~Li~~i~~~~g~--~i~p~ 577 (635)
.++++.|.++|.+|.++++.+..- .++++
T Consensus 300 ---------------~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d 330 (725)
T 3nb0_A 300 ---------------HEFQNLHALKKEKINDFVRGHFHGCFDFDLD 330 (725)
T ss_dssp ---------------THHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred ---------------hhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence 236678889999999999887653 45533
No 17
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=21.83 E-value=1.3e+02 Score=27.03 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=54.4
Q ss_pred ccccccccc-cccchhhchhhHHHHHHHHHcCCCCCCCCeEEEEeecCCCCCHHHHHHHHHHHHHHHHHcCCcCc-CCcc
Q psy17283 202 LHLQVKRIH-EYKRQLLNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDV-GDKL 279 (635)
Q Consensus 202 ~~~~~rR~h-eYKRq~Lnil~~~~ry~~i~~~~~~~~~p~~~IfaGKA~P~y~~ak~iIk~I~~~a~~innd~~i-~~~l 279 (635)
..+++-|+. .+|...+ ++..+.++..-+.. .+..+++.|...|. ....+-+++.... ...+ .|.+
T Consensus 38 ~i~~~G~~~~~~K~~~~-li~a~~~l~~~~~~-----~~~~l~i~G~~~~~--~~~~l~~~~~~~~-----~v~~~~g~~ 104 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDV-LLKAIEILSSKKEF-----QEMRFIIIGKGDPE--LEGWARSLEEKHG-----NVKVITEML 104 (200)
T ss_dssp EEEEESCBCSSSSCHHH-HHHHHHHHTTSGGG-----GGEEEEEECCBCHH--HHHHHHHHHHHCT-----TEEEECSCC
T ss_pred EEEEeeccccccCCHHH-HHHHHHHHHhhccC-----CCeEEEEECCCChH--HHHHHHHHHHhcC-----CEEEEeccC
Confidence 445888999 8998877 55555443100222 35788888875431 1223333333322 1222 3321
Q ss_pred ------------eEEEE---------------ecCceeeccccCccHHHHHhhcCcceeecCC
Q psy17283 280 ------------KVVFL---------------LNGALTIGTLDGANVEMAEEMGNDNIFIFGM 315 (635)
Q Consensus 280 ------------kvvfl---------------~NG~l~l~tlDG~~~E~~~~vG~eN~~~fG~ 315 (635)
.+++. ..|.+.++|-.|+..|.. + +++++++..
T Consensus 105 ~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~--~~~g~~~~~ 164 (200)
T 2bfw_A 105 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII-T--NETGILVKA 164 (200)
T ss_dssp CHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-C--TTTCEEECT
T ss_pred CHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-C--CCceEEecC
Confidence 12221 788888888777666666 3 678888764
Done!