RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17283
(635 letters)
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 824
Score = 234 bits (597), Expect = 1e-67
Identities = 139/204 (68%), Positives = 166/204 (81%)
Query: 380 QAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDL 439
+AW++TVKTCAYTNHTVLPEALERWPV L+E LLPRH+QIIY IN L V A FP D+
Sbjct: 352 KAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDV 411
Query: 440 DRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNK 499
DR+RRMSL+EE KR+NMAHL I GSHAVNGVA IHSEI+K IF+DFYEL P KFQNK
Sbjct: 412 DRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNK 471
Query: 500 TNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENK 559
TNGITPRRWL+LCNP LA++IAE+IGE++I L+QL +L Y D AF R+V KVKQENK
Sbjct: 472 TNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENK 531
Query: 560 MKLAQYIEKEYHIKVNAASIFDMQ 583
+K A Y+E+EY + +N S+FD+Q
Sbjct: 532 LKFAAYLEREYKVHINPNSLFDVQ 555
Score = 218 bits (557), Expect = 4e-62
Identities = 124/299 (41%), Positives = 167/299 (55%), Gaps = 45/299 (15%)
Query: 119 FDKFPEKVAIQLNDTHP----SLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLP 174
++ P K + N P L P L ++ + G E+ D K +Y +
Sbjct: 461 YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFI 520
Query: 175 EALERWPVTLMENL---LPRHMQIIYHINFLHL-QVKRIHEYKRQLLNALHIITLYNRIK 230
+ + L R ++ + N L QVKRIHEYKRQLLN LH+ITLYNRIK
Sbjct: 521 RDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIK 580
Query: 231 KNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFL------ 284
K P PRT+MIGGKAAPGY+ AK IIKLI ++ VVN+DP VGD+L+V+FL
Sbjct: 581 KEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVS 640
Query: 285 -------------------------------LNGALTIGTLDGANVEMAEEMGNDNIFIF 313
LNGALTIGT+DGANVEMAEE G +N FIF
Sbjct: 641 LAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIF 700
Query: 314 GMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLKWDS 372
GM V+ V+ L ++GY+A YY+ PEL+ +++Q+++GFFSP+ PD FKD+ ++L+ D
Sbjct: 701 GMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDR 759
Score = 189 bits (480), Expect = 1e-51
Identities = 144/303 (47%), Positives = 169/303 (55%), Gaps = 72/303 (23%)
Query: 2 RLAACFLDSMATLGLSA------YGYGI------------RYEYGIF------------A 31
RLAACFLDSMATLGL+A Y +GI + +
Sbjct: 127 RLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFT 186
Query: 32 QKIKNGEQTEEPDDWLRYVND--------------------------------------- 52
+ + E ++V+
Sbjct: 187 LPVHFYGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDF 246
Query: 53 --GDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRTSKSV 110
G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQDIIRRF++SK
Sbjct: 247 NVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFG 306
Query: 111 AEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNH 170
++ FD FP+KVAIQLNDTHPSLAIPELMRVLVD+E L+WDKAW++TVKTCAYTNH
Sbjct: 307 CRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNH 366
Query: 171 TVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQ-VKRIHEYKRQLLNALHIITLYNRI 229
TVLPEALERWPV L+E LLPRH+QIIY IN L V L + ++
Sbjct: 367 TVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVK 426
Query: 230 KKN 232
+ N
Sbjct: 427 RIN 429
Score = 79.3 bits (195), Expect = 6e-16
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 583 QNQTKWLEMAIMNIASSGKFSSDRTITEYAREIWGVEPSYEKLP 626
+N +W M I NIA+SGKFSSDRTI +YAREIWGVEPS ++LP
Sbjct: 781 KNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLP 824
>d1ygpa_ c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 876
Score = 213 bits (543), Expect = 5e-60
Identities = 103/215 (47%), Positives = 148/215 (68%), Gaps = 11/215 (5%)
Query: 380 QAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQNVLAKFPNDL 439
+AWDI KT AYTNHTV+ EALE+WP L +LLPRH++IIY IN+ L++V KFP D+
Sbjct: 388 EAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFFLEDVAKKFPKDV 447
Query: 440 DRMRRMSLIEED-GDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFYEL-TPEKFQ 497
D + R+S+IEE+ ++++ MA L+IVGSH VNGV +HSE+IK IF+DF + P KF
Sbjct: 448 DLLSRISIIEENSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFV 507
Query: 498 NKTNGITPRRWLLLCNPSLADVIAEKIG---EDWIIHLEQLAQLKQYAKDPAFQREVFKV 554
N TNGITPRRWL NPSLA +I+E + E++++ + +L QL++Y +D F ++ +V
Sbjct: 508 NVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQV 567
Query: 555 KQENKMKLAQYIEKEY------HIKVNAASIFDMQ 583
K NK++L I+KE + + ++FDMQ
Sbjct: 568 KLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQ 602
Score = 191 bits (487), Expect = 2e-52
Identities = 99/313 (31%), Positives = 133/313 (42%), Gaps = 67/313 (21%)
Query: 123 PEKVAIQLNDTHP----SLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEALE 178
P K N P A P L +++ + ++ K + E L+
Sbjct: 503 PSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLK 562
Query: 179 RWPVTLMEN------LLPRHMQIIYHINFLHL-------QVKRIHEYKRQLLNALHIITL 225
+W + N L+ + + IN +L QVKRIHEYKRQ LN II
Sbjct: 563 KWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYR 622
Query: 226 YNRIKK---------NPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVG 276
Y +K K+ + + GGK+APGYY AK IIKLI VA +VNND +
Sbjct: 623 YLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIE 682
Query: 277 DKLKVVFL-------------------------------------LNGALTIGTLDGANV 299
LKVVF+ +NG L IGT+DGANV
Sbjct: 683 HLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANV 742
Query: 300 EMAEEMGNDNIFIFGMTVDQVEELK-KKGYDAPSYYNANPELKLVVDQITNGFFSPENPD 358
E+ E+G DN+F+FG + VEEL+ Y L V+ I +G FSPENP+
Sbjct: 743 EITREIGEDNVFLFGNLSENVEELRYNHQYHPQDLP---SSLDSVLSYIESGQFSPENPN 799
Query: 359 EFKDLSDILLKWD 371
EFK L D +
Sbjct: 800 EFKPLVDSIKYHG 812
Score = 185 bits (470), Expect = 3e-50
Identities = 98/178 (55%), Positives = 124/178 (69%), Gaps = 9/178 (5%)
Query: 47 LRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRT 106
L N+GDY +V + AE+I+ VLYPNDN GKELRLKQ+YF CAA+L DI+RRF
Sbjct: 287 LNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRF-- 344
Query: 107 SKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCA 166
K K + +FP++VAIQLNDTHP+LAI EL RVLVD+E L+W +AWDI KT A
Sbjct: 345 ------KKSKRPWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFA 398
Query: 167 YTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQ-VKRIHEYKRQLLNALHII 223
YTNHTV+ EALE+WP L +LLPRH++IIY IN+ L+ V + LL+ + II
Sbjct: 399 YTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFFLEDVAKKFPKDVDLLSRISII 456
Score = 93.9 bits (233), Expect = 2e-20
Identities = 35/50 (70%), Positives = 40/50 (80%)
Query: 2 RLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVN 51
RLAACF+DSMAT G+ A+GYG+RYEYGIFAQKI +G Q E PD WL N
Sbjct: 165 RLAACFVDSMATEGIPAWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGN 214
Score = 72.7 bits (178), Expect = 7e-14
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 586 TKWLEMAIMNIASSGKFSSDRTITEYAREIWGVEP 620
++WL+ +++++A+ G FSSDR I EY+ IW VEP
Sbjct: 840 SEWLKKSVLSLANVGFFSSDRCIEEYSDTIWNVEP 874
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP)
{Escherichia coli [TaxId: 562]}
Length = 796
Score = 201 bits (513), Expect = 3e-56
Identities = 100/274 (36%), Positives = 159/274 (58%), Gaps = 16/274 (5%)
Query: 310 IFIFGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILLK 369
D + G + V Q+ + + P+ + L D
Sbjct: 274 FQCACSVADILRRHHLAGRKLHELADY------EVIQLNDTHPTIAIPELLRVLID---- 323
Query: 370 WDSENPIDSLQAWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQ 429
E+ + AW IT KT AYTNHT++PEALERW V L++ LLPRHMQII IN
Sbjct: 324 ---EHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKT 380
Query: 430 NVLAKFPNDLDRMRRMSLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDFY 489
V +P D +++++ DK+V+MA+L +VG AVNGVA +HS+++ D+F +++
Sbjct: 381 LVEKTWPGDEKVWAKLAVVH---DKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYH 437
Query: 490 ELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWIIHLEQLAQLKQYAKDPAFQR 549
+L P KF N TNGITPRRW+ CNP+LA ++ + + ++W L+QL L+++A D F++
Sbjct: 438 QLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQ 497
Query: 550 EVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQ 583
+ ++KQ NK++LA++++ I++N +IFD+Q
Sbjct: 498 QYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQ 531
Score = 201 bits (513), Expect = 3e-56
Identities = 100/296 (33%), Positives = 140/296 (47%), Gaps = 53/296 (17%)
Query: 122 FPEKVAIQLNDTHP----SLAIPELMRVLVDVEGLEWDKAWDITVKTCAYTNHTVLPEAL 177
+P K N P P L +L EW D + + + +
Sbjct: 440 WPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADD---AKFR 496
Query: 178 ERWPVTLMENLLPRHMQIIYHINFLHL--------QVKRIHEYKRQLLNALHIITLYNRI 229
+++ N + R + + + + Q+KR+HEYKRQ LN LHI+ LY I
Sbjct: 497 QQYREIKQANKV-RLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEI 555
Query: 230 KKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVGDKLKVVFL----- 284
++NP+ PR + G KAAPGYY AK II I VA V+NNDP VGDKLKVVFL
Sbjct: 556 RENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCV 615
Query: 285 --------------------------------LNGALTIGTLDGANVEMAEEMGNDNIFI 312
LNGALT+GTLDGANVE+AE++G +NIFI
Sbjct: 616 SAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFI 675
Query: 313 FGMTVDQVEELKKKGYDAPSYYNANPELKLVVDQITNGFFSPENPDEFKDLSDILL 368
FG TV+QV+ + KGYD + + L V+ ++ +G +S + F + +
Sbjct: 676 FGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIG 731
Score = 158 bits (400), Expect = 3e-41
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 9/178 (5%)
Query: 47 LRYVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQDIIRRFRT 106
L NDGD+++A AE +++VLYPNDN F GK+LRL Q+YF CA ++ DI+RR
Sbjct: 230 LTKFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRH-- 287
Query: 107 SKSVAEIKDKSAFDKFPEKVAIQLNDTHPSLAIPELMRVLVDVEGLEWDKAWDITVKTCA 166
+ + IQLNDTHP++AIPEL+RVL+D + WD AW IT KT A
Sbjct: 288 ------HLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFA 341
Query: 167 YTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQ-VKRIHEYKRQLLNALHII 223
YTNHT++PEALERW V L++ LLPRHMQII IN V++ ++ L ++
Sbjct: 342 YTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVV 399
Score = 89.0 bits (220), Expect = 6e-19
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 2 RLAACFLDSMATLGLSAYGYGIRYEYGIFAQKIKNGEQTEEPDDWLRYVN 51
RLAACFLDSMAT+G SA GYG+ Y+YG+F Q +G+Q E PDDW R
Sbjct: 117 RLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNY 166
Score = 71.3 bits (174), Expect = 2e-13
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 583 QNQTKWLEMAIMNIASSGKFSSDRTITEYAREIWGVE 619
++Q W AI+N A G FSSDR+I +Y IW +
Sbjct: 759 RDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAK 795
>d1n0ua4 d.58.11.1 (A:482-560) Elongation factor 2 (eEF-2) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 79
Score = 27.5 bits (61), Expect = 1.3
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 431 VLAKFPNDLDRMRRM--SLIEEDGDKRVNMAHLSIVGSHAVNGVAFIHSEIIKHDIFRDF 488
V K NDL ++ L + D M+ G H V G +H EI D+ D
Sbjct: 12 VEVKNANDLPKLVEGLKRLSKSDPCVLTYMSES---GEHIVAGTGELHLEICLQDLEHDH 68
Query: 489 YEL 491
+
Sbjct: 69 AGV 71
>d1s6la2 d.357.1.2 (A:81-212) Alkylmercury lyase MerB {Escherichia
coli [TaxId: 562]}
Length = 132
Score = 27.9 bits (62), Expect = 2.1
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 124 EKVAIQLNDTHPSLAIPELMRV-LVDVEGLEWDKAWDITVKTCAYTNHTVLPEALERW 180
V++ ++ + P M V LV +A D+ C + + E W
Sbjct: 42 APVSLTVSPSEIQAVEPAGMAVSLVLP-----QEAADVRQSFCCHVHFFASVPTAEDW 94
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase
{Trypanosoma brucei [TaxId: 5691]}
Length = 178
Score = 27.3 bits (59), Expect = 4.1
Identities = 14/121 (11%), Positives = 28/121 (23%), Gaps = 3/121 (2%)
Query: 157 AWDITVKTCAYTNHTVLPEALERWPVTLMENLLPRHMQIIYHINFLHLQVKRIHEYKRQL 216
L L + + + + + Q
Sbjct: 57 ETMEAFAASLKKPRKALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQ 116
Query: 217 LNALHIITLYNRIKKNPKGKFTPRTIMIGGKAAPGYYTAKKIIKLICSVARVVNNDPDVG 276
L A + L I +G GG + + + I++ A+ + P V
Sbjct: 117 LEAAGLRFLGMGISGGEEGARKGPAFFPGGTLS-VWEEIRPIVEAAA--AKADDGRPCVT 173
Query: 277 D 277
Sbjct: 174 M 174
>d1gsua1 a.45.1.1 (A:85-217) Class mu GST {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 133
Score = 26.9 bits (59), Expect = 4.3
Identities = 11/104 (10%), Positives = 32/104 (30%), Gaps = 7/104 (6%)
Query: 470 NGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKIGEDWI 529
A + + + E P K + + + R W + + D +A +
Sbjct: 24 MAFARLCYSPDFEKLKPAYLEQLPGKLRQLSRFLGSRSWFVGDKLTFVDFLA-----YDV 78
Query: 530 IHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIK 573
+ +++ + + + + K+ Y+ +K
Sbjct: 79 LDQQRMFVPDCPELQGNLSQFLQRFEALEKIS--AYMRSGRFMK 120
>d1rq2a2 d.79.2.1 (A:206-312) Cell-division protein FtsZ
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 107
Score = 26.4 bits (58), Expect = 4.3
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Query: 240 RTIMI-GGKAAPGYYTAK-----KIIKLICSVARVVNNDPDVGDKLKVVFLLNGALTIGT 293
+ IM G A G +A+ I + ++ + + + L +
Sbjct: 7 KGIMSGAGTALMGIGSARGEGRSLKAAEIAINSPLLEASMEGAQGVLMSIAGGSDLGLFE 66
Query: 294 LDGANVEMAEEMGNDNIFIFGMTVDQ 319
++ A + + D IFG +D
Sbjct: 67 INEAASLVQDAAHPDANIIFGTVIDD 92
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Escherichia coli [TaxId:
562]}
Length = 338
Score = 27.6 bits (60), Expect = 4.4
Identities = 17/132 (12%), Positives = 41/132 (31%)
Query: 464 VGSHAVNGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEK 523
+GSH + ++I D + + + N +L I
Sbjct: 12 IGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD 71
Query: 524 IGEDWIIHLEQLAQLKQYAKDPAFQREVFKVKQENKMKLAQYIEKEYHIKVNAASIFDMQ 583
D +IH L + + + P + + + + I ++A+++ Q
Sbjct: 72 HAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQ 131
Query: 584 NQTKWLEMAIMN 595
+ ++E
Sbjct: 132 PKIPYVESFPTG 143
>d1gvfa_ c.1.10.2 (A:) Tagatose-1,6-bisphosphate aldolase
{Escherichia coli [TaxId: 562]}
Length = 284
Score = 26.9 bits (59), Expect = 7.1
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 470 NGVAFIHSEIIKHDIFRDFYELTPEKFQNKTNGITPRRWLLLCNPSLADVIAEKI 524
GV ++ + ++ F F G PR ++ + ++ +V+ KI
Sbjct: 223 LGVTKVN---VATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKI 274
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 26.6 bits (57), Expect = 8.7
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 605 DRTITEYAREIWGVEPSYEKLPAPHESADI 634
+ I ++ W E Y + P + AD+
Sbjct: 166 KQNIQKFINRYWKAEDYYLETEEPIKRADV 195
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.408
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,532,947
Number of extensions: 127417
Number of successful extensions: 395
Number of sequences better than 10.0: 1
Number of HSP's gapped: 385
Number of HSP's successfully gapped: 35
Length of query: 635
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 544
Effective length of database: 1,158,166
Effective search space: 630042304
Effective search space used: 630042304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.6 bits)