Query psy17288
Match_columns 322
No_of_seqs 212 out of 1940
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 18:09:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17288.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17288hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4420|consensus 100.0 3.1E-36 6.7E-41 265.0 14.8 249 38-294 26-285 (325)
2 PRK13972 GSH-dependent disulfi 100.0 1.2E-28 2.6E-33 219.6 15.7 201 38-303 1-212 (215)
3 PLN02473 glutathione S-transfe 100.0 2E-28 4.3E-33 217.8 16.4 201 38-295 2-210 (214)
4 PRK09481 sspA stringent starva 100.0 1E-27 2.2E-32 213.2 17.6 185 38-295 10-201 (211)
5 PRK15113 glutathione S-transfe 100.0 6.2E-28 1.4E-32 215.0 15.1 194 37-295 4-207 (214)
6 PLN02395 glutathione S-transfe 100.0 3.4E-27 7.4E-32 209.8 17.1 203 39-298 3-212 (215)
7 PRK11752 putative S-transferas 99.9 1E-26 2.2E-31 214.0 18.3 209 22-295 23-257 (264)
8 PRK10357 putative glutathione 99.9 1.7E-26 3.8E-31 203.5 16.7 193 39-297 1-201 (202)
9 COG0625 Gst Glutathione S-tran 99.9 2.6E-26 5.6E-31 203.9 17.0 190 39-291 1-199 (211)
10 TIGR01262 maiA maleylacetoacet 99.9 4.8E-26 1E-30 201.6 17.2 197 40-297 1-205 (210)
11 PRK10542 glutathionine S-trans 99.9 4.5E-26 9.7E-31 200.4 14.5 188 39-294 1-195 (201)
12 KOG0868|consensus 99.9 1.3E-24 2.8E-29 182.1 12.6 192 40-295 7-206 (217)
13 KOG0406|consensus 99.9 1.1E-23 2.3E-28 186.7 16.7 188 39-297 10-212 (231)
14 KOG0867|consensus 99.9 6E-24 1.3E-28 191.2 15.2 196 39-294 3-207 (226)
15 PLN02378 glutathione S-transfe 99.9 6.9E-23 1.5E-27 182.6 15.4 169 44-295 18-198 (213)
16 TIGR00862 O-ClC intracellular 99.9 1.5E-22 3.2E-27 182.7 16.0 172 46-295 19-219 (236)
17 PRK10387 glutaredoxin 2; Provi 99.9 2.8E-22 6E-27 177.5 17.2 203 39-290 1-207 (210)
18 PLN02817 glutathione dehydroge 99.9 1.3E-21 2.8E-26 179.9 14.9 167 46-295 73-250 (265)
19 TIGR02182 GRXB Glutaredoxin, G 99.9 1E-20 2.2E-25 168.2 17.0 188 40-274 1-198 (209)
20 PTZ00057 glutathione s-transfe 99.8 3.5E-20 7.7E-25 164.1 14.2 177 39-294 5-197 (205)
21 cd03052 GST_N_GDAP1 GST_N fami 99.8 3.2E-19 6.9E-24 132.3 8.2 72 39-110 1-73 (73)
22 cd03048 GST_N_Ure2p_like GST_N 99.8 2.3E-18 5.1E-23 129.9 9.6 77 38-114 1-80 (81)
23 cd03045 GST_N_Delta_Epsilon GS 99.8 3.9E-18 8.5E-23 126.1 8.6 73 39-111 1-74 (74)
24 cd03050 GST_N_Theta GST_N fami 99.7 8E-18 1.7E-22 125.4 9.1 75 39-113 1-76 (76)
25 PF13417 GST_N_3: Glutathione 99.7 9.8E-18 2.1E-22 124.8 8.5 72 41-115 1-73 (75)
26 cd03057 GST_N_Beta GST_N famil 99.7 1.4E-17 3E-22 124.4 9.0 76 39-114 1-77 (77)
27 cd03046 GST_N_GTT1_like GST_N 99.7 2.3E-17 5E-22 122.5 9.1 76 39-114 1-76 (76)
28 cd03053 GST_N_Phi GST_N family 99.7 2.2E-17 4.7E-22 122.8 8.9 74 39-112 2-76 (76)
29 cd03041 GST_N_2GST_N GST_N fam 99.7 2.4E-17 5.2E-22 123.4 8.0 74 38-113 1-77 (77)
30 KOG1695|consensus 99.7 1.9E-16 4.1E-21 139.4 14.8 189 36-295 1-199 (206)
31 cd03056 GST_N_4 GST_N family, 99.7 3E-17 6.5E-22 120.7 8.2 72 39-110 1-73 (73)
32 cd03047 GST_N_2 GST_N family, 99.7 3E-17 6.6E-22 121.3 8.2 72 39-110 1-73 (73)
33 cd03059 GST_N_SspA GST_N famil 99.7 7.7E-17 1.7E-21 118.7 8.7 72 39-113 1-73 (73)
34 cd03051 GST_N_GTT2_like GST_N 99.7 6.7E-17 1.4E-21 119.0 7.7 72 39-110 1-74 (74)
35 cd03058 GST_N_Tau GST_N family 99.7 1.1E-16 2.5E-21 118.5 8.9 72 39-113 1-74 (74)
36 cd03044 GST_N_EF1Bgamma GST_N 99.7 8E-17 1.7E-21 119.8 7.9 72 39-111 1-74 (75)
37 cd03061 GST_N_CLIC GST_N famil 99.7 1.2E-16 2.5E-21 123.0 8.8 68 45-115 21-88 (91)
38 cd03042 GST_N_Zeta GST_N famil 99.7 1.2E-16 2.6E-21 117.6 8.1 72 39-110 1-73 (73)
39 PF02798 GST_N: Glutathione S- 99.7 1.8E-16 3.9E-21 118.4 9.1 72 40-111 2-76 (76)
40 cd03076 GST_N_Pi GST_N family, 99.7 8.1E-17 1.8E-21 119.2 6.9 70 39-111 2-72 (73)
41 cd03039 GST_N_Sigma_like GST_N 99.7 1.1E-16 2.4E-21 117.9 6.3 71 39-111 1-72 (72)
42 cd03075 GST_N_Mu GST_N family, 99.7 3.6E-16 7.7E-21 118.5 8.0 74 40-113 2-82 (82)
43 cd03060 GST_N_Omega_like GST_N 99.6 5.4E-16 1.2E-20 114.0 8.4 67 40-109 2-70 (71)
44 PLN02907 glutamate-tRNA ligase 99.6 1.4E-15 3E-20 156.3 14.1 149 39-289 3-159 (722)
45 PF13409 GST_N_2: Glutathione 99.6 1.1E-15 2.4E-20 112.3 7.3 67 46-112 2-70 (70)
46 cd03049 GST_N_3 GST_N family, 99.6 1.5E-15 3.3E-20 112.1 7.1 69 39-110 1-73 (73)
47 cd03037 GST_N_GRX2 GST_N famil 99.6 1.9E-15 4.1E-20 111.0 7.4 69 39-111 1-71 (71)
48 cd03055 GST_N_Omega GST_N fami 99.6 2.3E-15 5E-20 115.8 8.1 71 37-110 17-89 (89)
49 cd03077 GST_N_Alpha GST_N fami 99.6 4E-15 8.6E-20 111.9 8.6 70 39-114 2-77 (79)
50 cd03038 GST_N_etherase_LigE GS 99.6 2.4E-15 5.2E-20 114.3 7.2 69 45-114 15-84 (84)
51 cd03080 GST_N_Metaxin_like GST 99.6 6.9E-15 1.5E-19 109.4 8.3 66 39-114 2-75 (75)
52 cd03043 GST_N_1 GST_N family, 99.6 7.5E-15 1.6E-19 108.7 8.2 67 43-110 7-73 (73)
53 cd03040 GST_N_mPGES2 GST_N fam 99.5 2.2E-14 4.7E-19 106.9 8.2 70 39-113 2-76 (77)
54 cd00570 GST_N_family Glutathio 99.5 2.2E-13 4.7E-18 97.8 7.8 70 39-110 1-71 (71)
55 cd03054 GST_N_Metaxin GST_N fa 99.4 1.4E-12 3E-17 96.0 7.6 57 46-112 16-72 (72)
56 COG2999 GrxB Glutaredoxin 2 [P 99.2 1E-10 2.2E-15 98.7 10.9 91 40-139 2-94 (215)
57 cd03079 GST_N_Metaxin2 GST_N f 99.2 4.9E-11 1.1E-15 88.2 6.5 59 45-112 16-74 (74)
58 KOG1422|consensus 99.2 6.4E-10 1.4E-14 96.5 14.1 67 46-115 21-87 (221)
59 KOG4244|consensus 98.9 2.5E-08 5.4E-13 89.6 14.5 183 46-259 61-246 (281)
60 KOG3029|consensus 98.9 7.2E-08 1.6E-12 87.1 15.3 70 37-111 89-159 (370)
61 cd03204 GST_C_GDAP1 GST_C fami 98.9 8.2E-09 1.8E-13 82.6 7.9 92 191-290 1-111 (111)
62 TIGR02190 GlrX-dom Glutaredoxi 98.7 1.1E-07 2.3E-12 71.3 7.8 70 38-110 9-79 (79)
63 cd03078 GST_N_Metaxin1_like GS 98.7 1.1E-07 2.4E-12 70.3 7.6 57 46-112 16-72 (73)
64 PRK10638 glutaredoxin 3; Provi 98.5 3.8E-07 8.3E-12 68.9 7.4 71 38-110 3-74 (83)
65 cd03029 GRX_hybridPRX5 Glutare 98.4 1.3E-06 2.8E-11 64.0 7.7 69 39-110 3-72 (72)
66 cd03182 GST_C_GTT2_like GST_C 98.4 6.9E-07 1.5E-11 71.2 6.7 70 213-290 43-117 (117)
67 TIGR02196 GlrX_YruB Glutaredox 98.3 2.9E-06 6.3E-11 61.3 7.3 70 38-109 1-73 (74)
68 cd03191 GST_C_Zeta GST_C famil 98.3 3.3E-06 7.1E-11 67.9 7.6 68 220-295 45-118 (121)
69 cd03196 GST_C_5 GST_C family, 98.2 2E-06 4.3E-11 69.1 5.8 69 217-293 39-114 (115)
70 cd03186 GST_C_SspA GST_N famil 98.2 4.8E-06 1E-10 65.4 7.4 70 216-293 32-106 (107)
71 cd03188 GST_C_Beta GST_C famil 98.2 3.2E-06 7E-11 66.7 6.4 71 215-293 39-113 (114)
72 KOG2903|consensus 98.2 5.3E-06 1.2E-10 74.4 8.3 177 37-274 36-273 (319)
73 cd03178 GST_C_Ure2p_like GST_C 98.2 3.3E-06 7.2E-11 66.8 6.3 73 213-293 34-111 (113)
74 cd02976 NrdH NrdH-redoxin (Nrd 98.2 3.8E-06 8.3E-11 60.6 6.1 61 39-101 2-63 (73)
75 cd03180 GST_C_2 GST_C family, 98.2 5.7E-06 1.2E-10 64.9 6.9 70 213-290 37-110 (110)
76 cd02066 GRX_family Glutaredoxi 98.2 9.1E-06 2E-10 58.3 7.3 68 39-108 2-70 (72)
77 cd03027 GRX_DEP Glutaredoxin ( 98.2 9E-06 2E-10 59.7 7.3 66 39-106 3-69 (73)
78 COG0435 ECM4 Predicted glutath 98.2 3.2E-05 6.9E-10 70.1 12.0 189 37-294 50-284 (324)
79 cd03189 GST_C_GTT1_like GST_C 98.1 8.6E-06 1.9E-10 65.1 7.6 60 215-274 50-113 (119)
80 cd03187 GST_C_Phi GST_C family 98.1 4.6E-06 9.9E-11 66.4 5.9 73 213-293 39-117 (118)
81 cd03190 GST_C_ECM4_like GST_C 98.1 8.9E-06 1.9E-10 67.8 7.6 76 213-296 31-118 (142)
82 cd03198 GST_C_CLIC GST_C famil 98.0 7.9E-06 1.7E-10 67.5 5.7 75 213-295 23-123 (134)
83 TIGR02200 GlrX_actino Glutared 98.0 2E-05 4.3E-10 57.8 7.1 70 39-110 2-76 (77)
84 cd03207 GST_C_8 GST_C family, 98.0 3.6E-06 7.7E-11 65.7 2.9 70 217-294 28-100 (103)
85 PRK10329 glutaredoxin-like pro 98.0 2.2E-05 4.8E-10 59.1 6.5 58 38-98 2-60 (81)
86 PF13410 GST_C_2: Glutathione 98.0 8.3E-06 1.8E-10 58.9 3.9 60 215-274 2-68 (69)
87 cd03185 GST_C_Tau GST_C family 98.0 2.5E-05 5.4E-10 63.0 7.1 71 217-295 33-114 (126)
88 cd03179 GST_C_1 GST_C family, 97.9 2.3E-05 4.9E-10 60.9 6.0 63 213-275 37-103 (105)
89 cd03418 GRX_GRXb_1_3_like Glut 97.9 5.7E-05 1.2E-09 55.3 6.9 70 39-110 2-73 (75)
90 cd03201 GST_C_DHAR GST_C famil 97.9 2.5E-05 5.5E-10 63.3 5.4 71 218-296 29-110 (121)
91 cd03200 GST_C_JTV1 GST_C famil 97.8 3.4E-05 7.4E-10 59.9 5.6 52 222-275 38-92 (96)
92 COG0695 GrxC Glutaredoxin and 97.8 7.3E-05 1.6E-09 56.2 7.0 70 39-109 3-74 (80)
93 KOG3027|consensus 97.8 0.00072 1.6E-08 59.0 13.2 185 46-266 34-227 (257)
94 cd03181 GST_C_EFB1gamma GST_C 97.8 7.3E-05 1.6E-09 60.0 6.7 74 214-295 35-115 (123)
95 cd03183 GST_C_Theta GST_C fami 97.8 2.8E-05 6E-10 62.9 4.0 74 213-293 39-119 (126)
96 TIGR02181 GRX_bact Glutaredoxi 97.7 0.00016 3.4E-09 53.7 7.0 70 40-111 2-72 (79)
97 PF00043 GST_C: Glutathione S- 97.7 5.7E-05 1.2E-09 57.7 4.3 61 214-274 23-89 (95)
98 cd03208 GST_C_Alpha GST_C fami 97.7 3E-05 6.5E-10 64.3 2.7 90 221-319 41-137 (137)
99 TIGR02194 GlrX_NrdH Glutaredox 97.6 0.00012 2.7E-09 53.5 5.5 55 39-96 1-56 (72)
100 cd03419 GRX_GRXh_1_2_like Glut 97.6 0.00033 7.1E-09 52.0 7.9 73 39-111 2-76 (82)
101 cd03184 GST_C_Omega GST_C fami 97.6 4.5E-05 9.7E-10 61.7 2.8 72 216-295 29-112 (124)
102 cd03177 GST_C_Delta_Epsilon GS 97.6 6.2E-05 1.3E-09 60.2 3.5 70 217-294 36-110 (118)
103 TIGR02183 GRXA Glutaredoxin, G 97.5 0.00054 1.2E-08 52.0 8.2 74 39-114 2-83 (86)
104 KOG3028|consensus 97.5 0.0045 9.8E-08 57.4 14.5 206 46-286 17-230 (313)
105 PRK11200 grxA glutaredoxin 1; 97.5 0.00067 1.5E-08 51.2 7.7 75 38-114 2-84 (85)
106 cd03206 GST_C_7 GST_C family, 97.4 0.00024 5.1E-09 55.1 4.6 66 217-290 31-100 (100)
107 cd03209 GST_C_Mu GST_C family, 97.4 0.0002 4.4E-09 57.6 4.4 71 217-295 33-108 (121)
108 cd03210 GST_C_Pi GST_C family, 97.4 0.00021 4.5E-09 58.1 4.4 79 218-305 34-120 (126)
109 cd03203 GST_C_Lambda GST_C fam 97.4 0.00014 3E-09 58.7 3.0 65 223-296 34-111 (120)
110 PF00462 Glutaredoxin: Glutare 97.3 0.0003 6.4E-09 49.4 4.1 59 39-99 1-60 (60)
111 cd03195 GST_C_4 GST_C family, 97.3 0.00022 4.8E-09 57.0 3.6 65 218-292 41-109 (114)
112 cd03202 GST_C_etherase_LigE GS 97.2 0.00066 1.4E-08 55.1 5.3 60 216-275 55-120 (124)
113 cd00299 GST_C_family Glutathio 97.2 0.00053 1.1E-08 52.1 4.4 61 214-274 31-98 (100)
114 cd03193 GST_C_Metaxin GST_C fa 97.2 0.00068 1.5E-08 51.2 4.7 57 219-275 19-86 (88)
115 TIGR02180 GRX_euk Glutaredoxin 97.1 0.0024 5.2E-08 47.4 7.4 72 40-111 2-77 (84)
116 PHA03050 glutaredoxin; Provisi 97.1 0.0021 4.6E-08 51.1 7.2 70 38-107 14-88 (108)
117 PF10568 Tom37: Outer mitochon 97.1 0.0019 4.2E-08 47.4 6.5 54 46-109 14-71 (72)
118 TIGR02189 GlrX-like_plant Glut 97.1 0.0023 5E-08 50.0 7.2 71 38-108 9-81 (99)
119 cd03194 GST_C_3 GST_C family, 97.1 0.00054 1.2E-08 54.8 3.5 63 220-292 45-110 (114)
120 cd03205 GST_C_6 GST_C family, 97.0 0.001 2.3E-08 51.3 4.9 63 211-274 29-96 (98)
121 cd03192 GST_C_Sigma_like GST_C 96.9 0.0017 3.6E-08 50.4 4.8 61 215-275 35-103 (104)
122 TIGR00365 monothiol glutaredox 96.8 0.0068 1.5E-07 47.1 7.3 62 46-109 27-88 (97)
123 cd03028 GRX_PICOT_like Glutare 96.5 0.013 2.8E-07 44.8 7.4 63 45-109 22-84 (90)
124 PF14497 GST_C_3: Glutathione 95.8 0.013 2.8E-07 45.2 4.1 60 216-275 32-96 (99)
125 cd03211 GST_C_Metaxin2 GST_C f 95.1 0.057 1.2E-06 43.9 6.0 47 214-260 52-101 (126)
126 PRK12759 bifunctional gluaredo 94.9 0.082 1.8E-06 51.9 7.3 68 37-107 2-79 (410)
127 cd03212 GST_C_Metaxin1_3 GST_C 94.7 0.05 1.1E-06 45.0 4.6 49 214-262 59-110 (137)
128 cd03031 GRX_GRX_like Glutaredo 94.2 0.2 4.4E-06 42.0 7.1 62 45-108 15-80 (147)
129 cd02973 TRX_GRX_like Thioredox 93.6 0.26 5.6E-06 34.8 5.9 56 39-100 3-64 (67)
130 cd03032 ArsC_Spx Arsenate Redu 93.2 0.12 2.7E-06 41.2 4.1 32 38-69 1-33 (115)
131 PRK10824 glutaredoxin-4; Provi 93.1 0.35 7.5E-06 38.9 6.5 62 46-109 30-91 (115)
132 PRK01655 spxA transcriptional 93.1 0.12 2.7E-06 42.4 4.0 32 38-69 1-33 (131)
133 cd03036 ArsC_like Arsenate Red 92.6 0.14 3E-06 40.7 3.6 31 39-69 1-32 (111)
134 cd02977 ArsC_family Arsenate R 92.5 0.17 3.6E-06 39.6 3.9 31 39-69 1-32 (105)
135 PTZ00062 glutaredoxin; Provisi 92.5 0.41 8.8E-06 42.4 6.6 61 46-108 128-188 (204)
136 PRK12559 transcriptional regul 91.9 0.26 5.6E-06 40.5 4.4 32 38-69 1-33 (131)
137 PRK13344 spxA transcriptional 91.0 0.31 6.7E-06 40.1 4.0 32 38-69 1-33 (132)
138 COG1393 ArsC Arsenate reductas 90.3 0.46 1E-05 38.3 4.3 32 38-69 2-34 (117)
139 PRK10026 arsenate reductase; P 90.2 0.46 9.9E-06 39.6 4.3 33 36-68 1-34 (141)
140 TIGR01617 arsC_related transcr 90.1 0.39 8.4E-06 38.4 3.8 31 39-69 1-32 (117)
141 KOG1752|consensus 90.0 2 4.2E-05 33.9 7.6 71 40-110 17-89 (104)
142 cd03033 ArsC_15kD Arsenate Red 88.5 0.64 1.4E-05 37.1 3.9 31 39-69 2-33 (113)
143 cd03035 ArsC_Yffb Arsenate Red 88.2 0.69 1.5E-05 36.4 3.8 31 39-69 1-32 (105)
144 PRK10853 putative reductase; P 87.6 0.74 1.6E-05 37.1 3.8 31 38-68 1-32 (118)
145 TIGR00411 redox_disulf_1 small 87.5 6.7 0.00015 28.2 8.8 56 38-97 2-62 (82)
146 PF11287 DUF3088: Protein of u 87.0 2.1 4.6E-05 34.0 5.9 67 46-115 24-109 (112)
147 cd03030 GRX_SH3BGR Glutaredoxi 85.8 2.8 6.1E-05 32.2 6.0 58 48-107 18-79 (92)
148 cd01659 TRX_superfamily Thiore 84.5 3.1 6.8E-05 27.0 5.3 50 41-93 3-58 (69)
149 TIGR01616 nitro_assoc nitrogen 84.0 1.6 3.4E-05 35.7 4.0 30 39-68 3-33 (126)
150 PF14834 GST_C_4: Glutathione 84.0 1 2.2E-05 36.0 2.8 46 218-263 42-90 (117)
151 TIGR00412 redox_disulf_2 small 82.4 8.5 0.00018 28.0 7.1 54 39-99 3-60 (76)
152 cd03197 GST_C_mPGES2 GST_C fam 82.1 1.3 2.9E-05 37.2 2.9 37 239-275 102-142 (149)
153 PF05768 DUF836: Glutaredoxin- 80.8 10 0.00022 28.0 7.1 53 39-96 2-57 (81)
154 PHA02125 thioredoxin-like prot 80.8 5.7 0.00012 28.7 5.7 50 39-94 2-52 (75)
155 TIGR00014 arsC arsenate reduct 80.5 2.3 5.1E-05 33.8 3.8 30 39-68 1-31 (114)
156 cd03034 ArsC_ArsC Arsenate Red 79.5 2.6 5.7E-05 33.4 3.8 30 39-68 1-31 (112)
157 COG4545 Glutaredoxin-related p 78.9 5.8 0.00013 29.3 5.0 61 40-100 5-77 (85)
158 PF09635 MetRS-N: MetRS-N bind 78.0 1.4 3E-05 35.6 1.7 28 88-115 35-64 (122)
159 cd03026 AhpF_NTD_C TRX-GRX-lik 76.7 9 0.00019 29.0 5.8 61 34-100 11-77 (89)
160 PF04399 Glutaredoxin2_C: Glut 76.3 7.7 0.00017 31.9 5.7 53 220-274 60-116 (132)
161 cd03199 GST_C_GRX2 GST_C famil 70.4 46 0.00099 27.2 8.8 44 219-262 60-106 (128)
162 COG0278 Glutaredoxin-related p 70.0 15 0.00033 28.7 5.6 62 46-109 30-92 (105)
163 PF13192 Thioredoxin_3: Thiore 66.4 20 0.00044 25.9 5.6 55 39-100 3-61 (76)
164 PF04908 SH3BGR: SH3-binding, 63.3 18 0.00039 28.2 4.9 59 48-108 19-86 (99)
165 KOG1147|consensus 58.3 12 0.00027 37.7 4.0 43 94-138 43-85 (712)
166 PF03960 ArsC: ArsC family; I 57.1 11 0.00024 29.5 2.9 27 42-68 1-28 (110)
167 PF06528 Phage_P2_GpE: Phage P 50.3 5.5 0.00012 25.5 0.1 7 315-321 6-12 (39)
168 KOG2501|consensus 49.0 53 0.0012 27.8 5.8 51 33-83 30-89 (157)
169 cd02953 DsbDgamma DsbD gamma f 40.0 1E+02 0.0022 23.1 5.9 54 39-93 15-77 (104)
170 cd02949 TRX_NTR TRX domain, no 36.3 1.5E+02 0.0033 22.0 6.3 58 38-99 16-80 (97)
171 cd02947 TRX_family TRX family; 34.1 1.6E+02 0.0035 20.5 6.7 53 39-97 14-74 (93)
172 TIGR03143 AhpF_homolog putativ 32.6 81 0.0018 32.1 5.4 59 35-99 476-540 (555)
173 TIGR02681 phage_pRha phage reg 31.4 39 0.00085 26.7 2.3 26 89-114 2-28 (108)
174 cd02989 Phd_like_TxnDC9 Phosdu 28.1 2.9E+02 0.0062 21.4 7.5 58 39-100 26-89 (113)
175 TIGR01295 PedC_BrcD bacterioci 25.2 2.6E+02 0.0056 22.2 6.1 57 42-98 30-102 (122)
176 TIGR02187 GlrX_arch Glutaredox 24.4 4E+02 0.0087 23.2 7.8 56 34-93 132-191 (215)
177 PRK15317 alkyl hydroperoxide r 23.7 73 0.0016 32.1 3.2 74 35-112 116-197 (517)
178 PF04134 DUF393: Protein of un 23.5 2.4E+02 0.0052 21.6 5.6 70 42-112 2-77 (114)
179 cd02975 PfPDO_like_N Pyrococcu 22.9 3.2E+02 0.0068 21.2 6.1 45 45-93 33-80 (113)
180 PF00085 Thioredoxin: Thioredo 22.7 3.1E+02 0.0066 19.9 10.0 69 39-111 21-102 (103)
181 PHA02278 thioredoxin-like prot 22.1 3.7E+02 0.008 20.6 7.5 56 44-99 24-85 (103)
182 TIGR03140 AhpF alkyl hydropero 21.5 62 0.0013 32.6 2.1 74 35-112 117-198 (515)
No 1
>KOG4420|consensus
Probab=100.00 E-value=3.1e-36 Score=264.98 Aligned_cols=249 Identities=26% Similarity=0.397 Sum_probs=221.8
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCC
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNG 116 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~ 116 (322)
.+.||++| |.-|||||+++.||||+|+...|++.+|||+++||+.+||.|.||||++++.+|.||..|++|+++++.+.
T Consensus 26 ~~vLyhhpysf~sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ge 105 (325)
T KOG4420|consen 26 SLVLYHHPYSFSSQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGE 105 (325)
T ss_pred cceeeecCcccccceeeeehhhcccccceeeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhccc
Confidence 36899998 99999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCCCCC-HHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhH
Q psy17288 117 YKRLLPTD-MDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISD 195 (322)
Q Consensus 117 ~~~L~P~~-~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~ 195 (322)
..|.|.- ...-.++.++....+.+...++..||.+||.+...++.|+++++|..+.++.. .+..-..++.|++++
T Consensus 106 -r~l~pe~~S~~~d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~---~v~~l~~~e~pdla~ 181 (325)
T KOG4420|consen 106 -RVLMPEVGSLQHDRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATT---DVMKLDHEEEPDLAE 181 (325)
T ss_pred -ccccccccccccHHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHH---HHHHHHhhcCchhhH
Confidence 5688863 33457788888889999999999999999999999999999999887776542 344455556799999
Q ss_pred HHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCcch-hhhhHhhhhhhhcccCCcchhhh
Q psy17288 196 ILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN------NKGNETS-IAIKLGGRAHYVRILPLLSCHLQ 268 (322)
Q Consensus 196 ~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~------l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~~~ 268 (322)
+|.+|+.+.+.+.....+...++++.+++..+|+++|+.|.++ ++|++|| |||+|++.|+++.++|+...++.
T Consensus 182 ay~akqkkl~~kl~~hdd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~ 261 (325)
T KOG4420|consen 182 AYLAKQKKLMAKLLEHDDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWE 261 (325)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcc
Confidence 9999999999999999999999999999999999999999985 6999999 99999999999999999887776
Q ss_pred --hhhcccccccccccccccCccccccc
Q psy17288 269 --KKAHNQHFFVVNFGYFIRNPSQKIKL 294 (322)
Q Consensus 269 --~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (322)
+.++++.| +..+.||+|++--+
T Consensus 262 ~gsrpnle~Y----f~rvrrR~sf~kvl 285 (325)
T KOG4420|consen 262 DGSRPNLESY----FERVRRRFSFRKVL 285 (325)
T ss_pred cCCCccHHHH----HHHHHhhhHHHHhh
Confidence 67999988 66677889996433
No 2
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.96 E-value=1.2e-28 Score=219.60 Aligned_cols=201 Identities=16% Similarity=0.165 Sum_probs=154.3
Q ss_pred eeEEeecCCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEe-----CC--eeecCHHHHHHHHH
Q psy17288 38 LWALRYHDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVD-----GV--KIIPDSKRIIQYVE 110 (322)
Q Consensus 38 ~~~Ly~~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~d-----dg--~~L~ES~aI~~YL~ 110 (322)
|++||+.++++|+||+++|+++||+|+.+.+++..++++.++|+++||.|+||+|++ || .+|+||.||++||+
T Consensus 1 m~~Ly~~~~~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~ 80 (215)
T PRK13972 1 MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLA 80 (215)
T ss_pred CeEEEECCCCChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHH
Confidence 479999999999999999999999999999999888888999999999999999996 45 47999999999999
Q ss_pred HhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcC
Q psy17288 111 DNFSNGYKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVN 190 (322)
Q Consensus 111 ~~~~~~~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~ 190 (322)
++++ .+.|.++.+++++.+|+.+.+.. +++.+.. ...+.. .
T Consensus 81 ~~~~----~l~p~~~~~ra~~~~~~~~~~~~----------~~~~~~~---~~~~~~-------------------~--- 121 (215)
T PRK13972 81 EKTG----LFLSHETRERAATLQWLFWQVGG----------LGPMLGQ---NHHFNH-------------------A--- 121 (215)
T ss_pred HhcC----CCCCCCHHHHHHHHHHHHHHhhc----------cCcceee---eeeeec-------------------c---
Confidence 9975 37788889999999999776542 2221110 000000 0
Q ss_pred CChhHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC-cchh
Q psy17288 191 PSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL-LSCH 266 (322)
Q Consensus 191 p~~~~~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l-~~~~ 266 (322)
....+....++....+.+.|+.||++|+++ ++|+++| |||++++.+.++...++ ...+
T Consensus 122 ------------------~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~~~~~ 183 (215)
T PRK13972 122 ------------------APQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMY 183 (215)
T ss_pred ------------------CCCCCchHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcCCcchhC
Confidence 000122344556677889999999999865 7899988 99999887755433333 4678
Q ss_pred hhhhhcccccccccccccccCcccccccccCCCCCCc
Q psy17288 267 LQKKAHNQHFFVVNFGYFIRNPSQKIKLIPYGQGKPR 303 (322)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (322)
|++.+|.+ +..+| ||++.+..-.|-|+-|
T Consensus 184 P~l~~w~~-------r~~~r-p~~~~~~~~~~~~~~~ 212 (215)
T PRK13972 184 PAVKNWHE-------RIRSR-PATGQALLKAQLGDER 212 (215)
T ss_pred HHHHHHHH-------HHHhC-HHHHHHHHHhcccccc
Confidence 99999999 66775 9999888777777654
No 3
>PLN02473 glutathione S-transferase
Probab=99.96 E-value=2e-28 Score=217.78 Aligned_cols=201 Identities=18% Similarity=0.179 Sum_probs=154.5
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCC
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNG 116 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~ 116 (322)
.++||+.+ |++++||+++|+++|++|+.+.+++..+++..++|+++||.|+||+|++||.+|+||.+|++||++++++.
T Consensus 2 ~~kLy~~~~s~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~ 81 (214)
T PLN02473 2 VVKVYGQIKAANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQ 81 (214)
T ss_pred ceEEecCCCCCchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCc
Confidence 46999988 99999999999999999999999998888999999999999999999999999999999999999999742
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHH
Q psy17288 117 YKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDI 196 (322)
Q Consensus 117 ~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~ 196 (322)
...|+|.++.+++++.+|+.+......... ++ ++. ...+.
T Consensus 82 ~~~l~p~~~~~ra~~~~~~~~~~~~~~~~~------~~---------~~~--~~~~~----------------------- 121 (214)
T PLN02473 82 GTDLLGKTLEHRAIVDQWVEVENNYFYAVA------LP---------LVI--NLVFK----------------------- 121 (214)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcccHHH------HH---------HHH--HHHhc-----------------------
Confidence 136999998999999999876654221100 00 000 00000
Q ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhccc----CCcchhhhh
Q psy17288 197 LLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRIL----PLLSCHLQK 269 (322)
Q Consensus 197 y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~----~l~~~~~~~ 269 (322)
.......+.+..++...++.+.|+.+|++|+++ ++|+++| |||++++.+.++... ++.+.+|.+
T Consensus 122 ---------~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l 192 (214)
T PLN02473 122 ---------PRLGEPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENL 192 (214)
T ss_pred ---------ccccCCCChHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHH
Confidence 000111133455667788999999999999865 7899988 999999999876543 335678888
Q ss_pred hhcccccccccccccccCcccccccc
Q psy17288 270 KAHNQHFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (322)
.+|.+ +..+ +||++++..
T Consensus 193 ~~w~~-------~~~~-~p~~~~~~~ 210 (214)
T PLN02473 193 NRWWN-------EISA-RPAWKKLME 210 (214)
T ss_pred HHHHH-------HHhc-ChhhHHHHH
Confidence 99999 5566 499987754
No 4
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.96 E-value=1e-27 Score=213.18 Aligned_cols=185 Identities=19% Similarity=0.196 Sum_probs=147.8
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCC
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNG 116 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~ 116 (322)
+++||+.+ |++|++||++|+++|++|+.+.+++. +..++|+++||.|+||+|+++|.+|+||.||++||++++++
T Consensus 10 ~~~Ly~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~---~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~- 85 (211)
T PRK09481 10 VMTLFSGPTDIYSHQVRIVLAEKGVSVEIEQVEKD---NLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPH- 85 (211)
T ss_pred eeEEeCCCCChhHHHHHHHHHHCCCCCEEEeCCcc---cCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCC-
Confidence 47999987 99999999999999999999999873 45789999999999999999999999999999999999986
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHH
Q psy17288 117 YKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDI 196 (322)
Q Consensus 117 ~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~ 196 (322)
..|+|.++.+++++.+|+.+...... .. .....
T Consensus 86 -~~l~p~~~~~ra~~~~~~~~~~~~~~-----------------------~~--------------~~~~~--------- 118 (211)
T PRK09481 86 -PPLMPVYPVARGESRLMMHRIEKDWY-----------------------SL--------------MNKIV--------- 118 (211)
T ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHH-----------------------HH--------------HHHHh---------
Confidence 67999999999999999864432100 00 00000
Q ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC--c-chhhhhh
Q psy17288 197 LLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL--L-SCHLQKK 270 (322)
Q Consensus 197 y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l--~-~~~~~~~ 270 (322)
..+++..+...+.+.+.|+.+|+.|+++ ++|+++| |||++++.+.++...++ . ..+|.++
T Consensus 119 --------------~~~~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~~~~~~~~p~l~ 184 (211)
T PRK09481 119 --------------NGSASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGIELSGPGAKELK 184 (211)
T ss_pred --------------cCCHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCCCCCCCCChhHH
Confidence 0122334556778889999999999876 7899988 99999999988776654 2 4678889
Q ss_pred hcccccccccccccccCcccccccc
Q psy17288 271 AHNQHFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (322)
+|.+ +..+| ||++++..
T Consensus 185 ~w~~-------~~~~r-p~~~~~~~ 201 (211)
T PRK09481 185 GYMT-------RVFER-DSFLASLT 201 (211)
T ss_pred HHHH-------HHhcc-HHHHHHcC
Confidence 9999 66775 99987765
No 5
>PRK15113 glutathione S-transferase; Provisional
Probab=99.95 E-value=6.2e-28 Score=215.05 Aligned_cols=194 Identities=15% Similarity=0.121 Sum_probs=147.7
Q ss_pred ceeEEeec---CCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhc
Q psy17288 37 CLWALRYH---DKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 113 (322)
Q Consensus 37 ~~~~Ly~~---~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~ 113 (322)
.+++||+. .|++|+||+++|.|+||+|+.+.+++..+++..++|+++||.|+||+|++||.+|+||.||++||++++
T Consensus 4 ~~~~Ly~~~~~~s~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~ 83 (214)
T PRK15113 4 PAITLYSDAHFFSPYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERF 83 (214)
T ss_pred CeEEEEeCCCCCCchHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHc
Confidence 45789985 399999999999999999999999999888889999999999999999999999999999999999999
Q ss_pred CCCCCC---CCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcC
Q psy17288 114 SNGYKR---LLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVN 190 (322)
Q Consensus 114 ~~~~~~---L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~ 190 (322)
++ +. |+|.++.+++++++|+.+.+.-.. +.........++.
T Consensus 84 ~~--~~~~~l~p~~~~~ra~~~~~~~~~~~~~~----------~~~~~~~~~~~~~------------------------ 127 (214)
T PRK15113 84 AP--PAWERIYPADLQARARARQIQAWLRSDLM----------PLREERPTDVVFA------------------------ 127 (214)
T ss_pred CC--CCccccCCCCHHHHHHHHHHHHHHHhhhH----------HHhccCccchhcc------------------------
Confidence 86 44 999999999999999987753111 1000000000000
Q ss_pred CChhHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCcch-hhhhHhhhhhhhcccCCcchh
Q psy17288 191 PSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN---NKGNETS-IAIKLGGRAHYVRILPLLSCH 266 (322)
Q Consensus 191 p~~~~~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~---l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~ 266 (322)
...+....++..+.+.+.|+.+|++|+++ ++|+ +| |||++++.+.++...+... .
T Consensus 128 -------------------~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~~~-~ 186 (214)
T PRK15113 128 -------------------GAKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGDEV-P 186 (214)
T ss_pred -------------------CCCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCCCC-C
Confidence 00011222345567889999999999842 6786 88 9999999998887666532 2
Q ss_pred hhhhhcccccccccccccccCcccccccc
Q psy17288 267 LQKKAHNQHFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (322)
+.+.+|.+ +... |||++...-
T Consensus 187 p~l~~~~~-------r~~~-rp~~~~~~~ 207 (214)
T PRK15113 187 ERLADYAT-------FQWQ-RASVQRWLA 207 (214)
T ss_pred HHHHHHHH-------HHhc-CHHHHHHHH
Confidence 77889998 5566 599977653
No 6
>PLN02395 glutathione S-transferase
Probab=99.95 E-value=3.4e-27 Score=209.82 Aligned_cols=203 Identities=22% Similarity=0.252 Sum_probs=154.2
Q ss_pred eEEeecCCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCCCC
Q psy17288 39 WALRYHDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNGYK 118 (322)
Q Consensus 39 ~~Ly~~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~~~ 118 (322)
++||+.++++++||+++|.++|++|+.+.+++..+++..++|+++||.|+||+|+++|.+|+||.+|++||+++++...+
T Consensus 3 ~~ly~~~~~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~ 82 (215)
T PLN02395 3 LKVYGPAFASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGP 82 (215)
T ss_pred EEEEcCCcCcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCc
Confidence 69999888889999999999999999999999888888999999999999999999999999999999999999974223
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHHH
Q psy17288 119 RLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDILL 198 (322)
Q Consensus 119 ~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y~ 198 (322)
.|+|.++.+++++++|+.+.+.. +++.+. .... ... |
T Consensus 83 ~l~p~~~~~~~~~~~~~~~~~~~----------~~~~~~--------~~~~---------------~~~---------~- 119 (215)
T PLN02395 83 DLLGKTIEERGQVEQWLDVEATS----------YHPPLL--------NLTL---------------HIL---------F- 119 (215)
T ss_pred CcCCCChhHHHHHHHHHHHHHHh----------cCchHH--------HHHH---------------HHH---------h-
Confidence 69999989999999999766531 121110 0000 000 0
Q ss_pred HHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcc-cC---Ccchhhhhhh
Q psy17288 199 DKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRI-LP---LLSCHLQKKA 271 (322)
Q Consensus 199 ~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~-~~---l~~~~~~~~~ 271 (322)
... .....+.+..++..+++.+.|+.+|++|+++ ++|+++| |||++++.+.++.. .+ ..+.++.+.+
T Consensus 120 -----~~~-~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~ 193 (215)
T PLN02395 120 -----ASK-MGFPADEKVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSA 193 (215)
T ss_pred -----hhh-ccCCCcHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHH
Confidence 000 0011123445667888999999999999875 7899988 99999988876632 11 2456788899
Q ss_pred cccccccccccccccCcccccccccCC
Q psy17288 272 HNQHFFVVNFGYFIRNPSQKIKLIPYG 298 (322)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (322)
|++ +...| |+++.+...++
T Consensus 194 w~~-------~~~~r-p~~k~~~~~~~ 212 (215)
T PLN02395 194 WWD-------DISSR-PAWKEVLAKYS 212 (215)
T ss_pred HHH-------HHHcC-hHHHHHHHHhc
Confidence 999 66775 99998876543
No 7
>PRK11752 putative S-transferase; Provisional
Probab=99.95 E-value=1e-26 Score=213.95 Aligned_cols=209 Identities=18% Similarity=0.182 Sum_probs=157.1
Q ss_pred cCCCCCcccccccccc-----eeEEeecCCchHHHHHHHHHhc------CCCeEEEEeeCCCCCCCchhHHhhCCCCCcc
Q psy17288 22 LPESLPYAIATQEVCC-----LWALRYHDKQVMRKVIMTLHEK------KLNFKTHLVNLASNEQYESWFLEVNPLGEVP 90 (322)
Q Consensus 22 ~~~~~~~~~~~~~~~~-----~~~Ly~~~Sp~s~kVr~~L~ek------gi~y~~v~v~~~~~e~~~~~~l~~nP~gkVP 90 (322)
-++|-|.+.++-+... +++||+.+|++|+||+++|+|+ |++|+.+.|++..+++..++|+++||.|+||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~Ly~~~s~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~GkVP 102 (264)
T PRK11752 23 ANINRPVAGATHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNSKIP 102 (264)
T ss_pred cccCCCCCCcchhcccCCCCCCeEEecCCCCchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCCCCC
Confidence 4566677666665444 8999998899999999999997 9999999999988888899999999999999
Q ss_pred EEEeC----CeeecCHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCch
Q psy17288 91 VLVDG----VKIIPDSKRIIQYVEDNFSNGYKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLP 166 (322)
Q Consensus 91 vL~dd----g~~L~ES~aI~~YL~~~~~~~~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~ 166 (322)
+|+++ |.+|+||.||++||+++++ .|+|.++.+++++++|+.+.+.... ... .
T Consensus 103 ~Lv~~dg~~~~~L~ES~AIl~YL~~~~~----~L~P~~~~era~v~~wl~~~~~~~~-----------~~~--------~ 159 (264)
T PRK11752 103 ALLDRSGNPPIRVFESGAILLYLAEKFG----AFLPKDLAARTETLNWLFWQQGSAP-----------FLG--------G 159 (264)
T ss_pred EEEeCCCCCCeEEEcHHHHHHHHHHhcC----CcCCCCHHHHHHHHHHHHHHhhhhh-----------HHH--------H
Confidence 99963 3699999999999999986 3999999999999999876643110 000 0
Q ss_pred hhHHhhhhcCCCcHHHHHHhhhcCCChhHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcc
Q psy17288 167 SNRAFMMDNQSRKPQVIRKAADVNPSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNET 244 (322)
Q Consensus 167 ~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~ 244 (322)
.....+ .. .........++...++.+.|+.||++|+++ ++|+++
T Consensus 160 ~~~~~~------------~~----------------------~~~~~~~~~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~ 205 (264)
T PRK11752 160 GFGHFY------------AY----------------------APEKIEYAINRFTMEAKRQLDVLDKQLAEHEYIAGDEY 205 (264)
T ss_pred HHHHHH------------Hh----------------------CCccchHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcc
Confidence 000000 00 000112234556677889999999999875 789999
Q ss_pred h-hhhhHhhhhhhhccc------CC--cchhhhhhhcccccccccccccccCcccccccc
Q psy17288 245 S-IAIKLGGRAHYVRIL------PL--LSCHLQKKAHNQHFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 245 t-ADI~l~~~L~~l~~~------~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (322)
| |||++++.+.++... +. .+.+|.+++|++ +...| ||++.+..
T Consensus 206 TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~-------rv~~r-Ps~k~~~~ 257 (264)
T PRK11752 206 TIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAK-------EIAER-PAVKRGRI 257 (264)
T ss_pred CHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHH-------HHHhC-HHHHHHHh
Confidence 9 999999887766431 11 356788899999 66775 99988764
No 8
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.94 E-value=1.7e-26 Score=203.47 Aligned_cols=193 Identities=19% Similarity=0.194 Sum_probs=147.7
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE-eCCeeecCHHHHHHHHHHhcCCC
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVEDNFSNG 116 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~-ddg~~L~ES~aI~~YL~~~~~~~ 116 (322)
++||+.+ |+++++||++|+++|++|+.+.++...+ .+++.+.||.|+||+|+ ++|.+|+||.+|++||++++++
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gv~ye~~~~~~~~~---~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~- 76 (202)
T PRK10357 1 MKLIGSYTSPFVRKISILLLEKGITFEFVNELPYNA---DNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVA- 76 (202)
T ss_pred CeeecCCCCchHHHHHHHHHHcCCCCeEEecCCCCC---chhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCC-
Confidence 3788876 9999999999999999999998887655 56778899999999998 6889999999999999999876
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHH
Q psy17288 117 YKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDI 196 (322)
Q Consensus 117 ~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~ 196 (322)
..|+|.++.+++++++|..+.++........ .+ .
T Consensus 77 -~~l~p~~~~~~a~~~~~~~~~~~~~~~~~~~-------------------~~----------------~---------- 110 (202)
T PRK10357 77 -PAMLPRDPLAALRVRQLEALADGIMDAALVS-------------------VR----------------E---------- 110 (202)
T ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-------------------HH----------------H----------
Confidence 5799999888999999987665422111000 00 0
Q ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcch-hhhhHhhhhhhhcccCC----cchhhhhh
Q psy17288 197 LLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN-NKGNETS-IAIKLGGRAHYVRILPL----LSCHLQKK 270 (322)
Q Consensus 197 y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~-l~Gd~~t-ADI~l~~~L~~l~~~~l----~~~~~~~~ 270 (322)
. .. .....+.+.++.....+.+.|+.||++|.++ ++|+++| |||++++.+.++..... ...+|.++
T Consensus 111 ---~----~~-~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~~l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~ 182 (202)
T PRK10357 111 ---Q----AR-PAAQQSEDELLRQREKINRSLDALEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLV 182 (202)
T ss_pred ---H----hC-ccccccHHHHHHHHHHHHHHHHHHHHhhccCcccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHH
Confidence 0 00 0011133455667788999999999999755 8999988 99999999998765322 34567788
Q ss_pred hcccccccccccccccCcccccccccC
Q psy17288 271 AHNQHFFVVNFGYFIRNPSQKIKLIPY 297 (322)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (322)
+|++ +... |||++.+.||.
T Consensus 183 ~~~~-------~i~~-rp~~~~~~~~~ 201 (202)
T PRK10357 183 KLVE-------NLFQ-RESFARTEPPK 201 (202)
T ss_pred HHHH-------HHhc-ChhhhhcCCCC
Confidence 8888 5566 59999998864
No 9
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=2.6e-26 Score=203.94 Aligned_cols=190 Identities=26% Similarity=0.297 Sum_probs=147.8
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCe-eecCHHHHHHHHHHhcCCC
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVK-IIPDSKRIIQYVEDNFSNG 116 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~-~L~ES~aI~~YL~~~~~~~ 116 (322)
++||+.+ ||+|+||+++|.++|++|+.+.|++.. ++..++|+++||.|+||+|++||. +|+||.||++||+++|++
T Consensus 1 ~~L~~~~~sp~~~kv~l~l~e~g~~ye~~~v~~~~-~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~- 78 (211)
T COG0625 1 MKLYGSPTSPYSRKVRLALEEKGLPYEIVLVDLDA-EQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPG- 78 (211)
T ss_pred CeeecCCCCcchHHHHHHHHHcCCCceEEEeCccc-ccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCC-
Confidence 3788877 999999999999999999999999988 778999999999999999997654 999999999999999986
Q ss_pred CCCCCCCCHH---HHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCCh
Q psy17288 117 YKRLLPTDMD---SKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSI 193 (322)
Q Consensus 117 ~~~L~P~~~~---~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~ 193 (322)
+.|+|.++. +|+.+.+|+.+... .++|.+. .. ...
T Consensus 79 -~~l~p~~~~~r~~r~~~~~~~~~~~~----------~~~~~~~---------~~----------------~~~------ 116 (211)
T COG0625 79 -PPLLPADPLARRARALLLWWLFFAAS----------DLHPVIG---------QR----------------RRA------ 116 (211)
T ss_pred -CCcCCCCchhHHHHHHHHHHHHHHHh----------cccHHHH---------HH----------------Hhh------
Confidence 349998874 77888888865532 1222111 00 000
Q ss_pred hHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC-cchhhhh
Q psy17288 194 SDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL-LSCHLQK 269 (322)
Q Consensus 194 ~~~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l-~~~~~~~ 269 (322)
........+....+...+.+...|+.+|+.|+++ ++|+++| |||.+++.+.++...+. .+.++++
T Consensus 117 -----------~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~~~~~~p~l 185 (211)
T COG0625 117 -----------LLGSEPELLEAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGEELADYPAL 185 (211)
T ss_pred -----------hccccccccHHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCcccccChHH
Confidence 0000000035667788899999999999999976 8899999 99999999999777654 3678889
Q ss_pred hhcccccccccccccccCcccc
Q psy17288 270 KAHNQHFFVVNFGYFIRNPSQK 291 (322)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~ 291 (322)
++|.+ +...| |+..
T Consensus 186 ~~w~~-------r~~~r-p~~~ 199 (211)
T COG0625 186 KAWYE-------RVLAR-PAFR 199 (211)
T ss_pred HHHHH-------HHHcC-Cchh
Confidence 99999 55664 8854
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.94 E-value=4.8e-26 Score=201.59 Aligned_cols=197 Identities=20% Similarity=0.195 Sum_probs=148.6
Q ss_pred EEeec-CCchHHHHHHHHHhcCCCeEEEEeeCC-CCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCCC
Q psy17288 40 ALRYH-DKQVMRKVIMTLHEKKLNFKTHLVNLA-SNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNGY 117 (322)
Q Consensus 40 ~Ly~~-~Sp~s~kVr~~L~ekgi~y~~v~v~~~-~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~~ 117 (322)
+||+. +|++|+|||++|+++||+|+.+.+++. .+++..++|.++||.|+||+|++||.+|+||.+|++||++++++
T Consensus 1 ~Ly~~~~s~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~-- 78 (210)
T TIGR01262 1 KLYSYWRSSCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPD-- 78 (210)
T ss_pred CcccCCCCCchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCC--
Confidence 36754 599999999999999999999999874 34666789999999999999999999999999999999999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHH
Q psy17288 118 KRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDIL 197 (322)
Q Consensus 118 ~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y 197 (322)
..|+|.++.+++++++|+.+.+.. +++... ......+ .
T Consensus 79 ~~l~p~~~~~~a~~~~~~~~~~~~----------~~~~~~--------~~~~~~~--------------~---------- 116 (210)
T TIGR01262 79 PPLLPADPIKRARVRALALLIACD----------IHPLNN--------LRVLQYL--------------R---------- 116 (210)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhcc----------cChhhh--------hhHHHHH--------------H----------
Confidence 579999899999999998655421 121110 0000000 0
Q ss_pred HHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcch-hhhhHhhhhhhhcccCC-cchhhhhhh
Q psy17288 198 LDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN----NKGNETS-IAIKLGGRAHYVRILPL-LSCHLQKKA 271 (322)
Q Consensus 198 ~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~----l~Gd~~t-ADI~l~~~L~~l~~~~l-~~~~~~~~~ 271 (322)
.+ ....+....+...+.+.+.|+.+|++|+++ ++|+++| |||++++.+.++...++ .+.+|.+.+
T Consensus 117 -~~--------~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~~~~~~p~l~~ 187 (210)
T TIGR01262 117 -EK--------LGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGVDLTPYPTLRR 187 (210)
T ss_pred -hh--------cCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCCCcccchHHHH
Confidence 00 000011122335567899999999999862 6899998 99999999988765554 467888899
Q ss_pred cccccccccccccccCcccccccccC
Q psy17288 272 HNQHFFVVNFGYFIRNPSQKIKLIPY 297 (322)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (322)
|++ +..+| |+++++....
T Consensus 188 ~~~-------~~~~r-p~~~~~~~~~ 205 (210)
T TIGR01262 188 IAA-------ALAAL-PAFQRAHPEN 205 (210)
T ss_pred HHH-------HHhcC-HHHHHhCccc
Confidence 999 66775 9999998755
No 11
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.94 E-value=4.5e-26 Score=200.44 Aligned_cols=188 Identities=22% Similarity=0.302 Sum_probs=144.9
Q ss_pred eEEeecCCchHHHHHHHHHhcCCCeEEEEeeCCCCC-CCchhHHhhCCCCCccEEE-eCCeeecCHHHHHHHHHHhcCCC
Q psy17288 39 WALRYHDKQVMRKVIMTLHEKKLNFKTHLVNLASNE-QYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVEDNFSNG 116 (322)
Q Consensus 39 ~~Ly~~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e-~~~~~~l~~nP~gkVPvL~-ddg~~L~ES~aI~~YL~~~~~~~ 116 (322)
|+||+.+++++++|+++|+++||+|+.+.|++..++ +..++|+++||.|+||+|+ +||.+|+||.+|++||++++++
T Consensus 1 m~l~~~~~s~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~- 79 (201)
T PRK10542 1 MKLFYKPGACSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD- 79 (201)
T ss_pred CceeecccHHHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcc-
Confidence 478998877999999999999999999999987664 4568999999999999998 6889999999999999999986
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhH
Q psy17288 117 YKRLL-PTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISD 195 (322)
Q Consensus 117 ~~~L~-P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~ 195 (322)
..++ |.++.+++++.+|+.++.+- +++.+. +++. +
T Consensus 80 -~~l~~p~~~~~ra~~~~~~~~~~~~----------~~~~~~-----~~~~------------------------~---- 115 (201)
T PRK10542 80 -RQLLAPVGSLSRYHTIEWLNYIATE----------LHKGFT-----PLFR------------------------P---- 115 (201)
T ss_pred -cccCCCCCcHHHHHHHHHHHHHHhh----------hhhhhh-----hccC------------------------C----
Confidence 4565 56778899999998765421 111110 0000 0
Q ss_pred HHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC-cchhhhhhh
Q psy17288 196 ILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL-LSCHLQKKA 271 (322)
Q Consensus 196 ~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l-~~~~~~~~~ 271 (322)
...++..+...+.+.+.|+.+|+.|+++ ++|+.+| |||++++.+.++...+. ...+|.+.+
T Consensus 116 ---------------~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~p~l~~ 180 (201)
T PRK10542 116 ---------------DTPEEYKPTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEHIAA 180 (201)
T ss_pred ---------------CChHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCCCcccchHHHH
Confidence 0011122345677889999999999866 7899988 99999999988877765 456888889
Q ss_pred cccccccccccccccCccccccc
Q psy17288 272 HNQHFFVVNFGYFIRNPSQKIKL 294 (322)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~ 294 (322)
|.+ +...| ||++++.
T Consensus 181 w~~-------~~~~~-p~~k~~~ 195 (201)
T PRK10542 181 YMQ-------RVAER-PAVAAAL 195 (201)
T ss_pred HHH-------HHHcC-HHHHHHH
Confidence 998 55664 9998765
No 12
>KOG0868|consensus
Probab=99.92 E-value=1.3e-24 Score=182.13 Aligned_cols=192 Identities=21% Similarity=0.239 Sum_probs=142.2
Q ss_pred EEee-cCCchHHHHHHHHHhcCCCeEEEEeeCCCC-CCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCCC
Q psy17288 40 ALRY-HDKQVMRKVIMTLHEKKLNFKTHLVNLASN-EQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNGY 117 (322)
Q Consensus 40 ~Ly~-~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~-e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~~ 117 (322)
+||. |.|.|+.|||++|..|||+|+.++|++..+ ++...+|.++||+++||+|++||.+|+||.||++||++.+|+
T Consensus 7 iLYSYWrSSCswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~-- 84 (217)
T KOG0868|consen 7 ILYSYWRSSCSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPD-- 84 (217)
T ss_pred hhhhhhcccchHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCC--
Confidence 5674 669999999999999999999999999876 456779999999999999999999999999999999999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHH
Q psy17288 118 KRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDIL 197 (322)
Q Consensus 118 ~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y 197 (322)
++|+|.|+..||.+++....+ .+.+.|.--. .++..+.+
T Consensus 85 ppLLP~d~~KRA~~r~i~~~i----------~sgIQPlQNl----------------------~vl~~l~e--------- 123 (217)
T KOG0868|consen 85 PPLLPKDPHKRAKARAISLLI----------ASGIQPLQNL----------------------SVLKMLNE--------- 123 (217)
T ss_pred CCCCCcCHHHHHHHHHHHHHH----------HhCCCcchhh----------------------HHHHHhcc---------
Confidence 899999999999998887432 2223332110 01111110
Q ss_pred HHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcch-hhhhHhhhhhhhcccCC-cchhhhhhh
Q psy17288 198 LDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN----NKGNETS-IAIKLGGRAHYVRILPL-LSCHLQKKA 271 (322)
Q Consensus 198 ~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~----l~Gd~~t-ADI~l~~~L~~l~~~~l-~~~~~~~~~ 271 (322)
.........+...+.+.+..||+.|... -+||+.+ ||+.+...++..+...+ ...+|-..-
T Consensus 124 -------------k~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf~vdl~PYPti~r 190 (217)
T KOG0868|consen 124 -------------KEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRFHVDLTPYPTITR 190 (217)
T ss_pred -------------cccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhccccCCcCchHHH
Confidence 0011113445677889999999999976 3799987 99999999998866644 445555444
Q ss_pred cccccccccccccccCcccccccc
Q psy17288 272 HNQHFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~ 295 (322)
-.+.+ .. .|.++.+-|
T Consensus 191 i~e~l-------~e-lpaFq~ahP 206 (217)
T KOG0868|consen 191 INEEL-------AE-LPAFQAAHP 206 (217)
T ss_pred HHHHH-------Hh-CHHHHhcCC
Confidence 44422 22 466666664
No 13
>KOG0406|consensus
Probab=99.91 E-value=1.1e-23 Score=186.67 Aligned_cols=188 Identities=19% Similarity=0.173 Sum_probs=147.5
Q ss_pred eEEeec-CCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhC-CCCCccEEEeCCeeecCHHHHHHHHHHhcCCC
Q psy17288 39 WALRYH-DKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVN-PLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNG 116 (322)
Q Consensus 39 ~~Ly~~-~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~n-P~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~ 116 (322)
++||.. .|||++|++++|++|||+|+.+..|+.+ +++++++.| +.++||||+++|..|+||..|++|||+.++++
T Consensus 10 vrL~~~w~sPfa~R~~iaL~~KgI~yE~veedl~~---Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~ 86 (231)
T KOG0406|consen 10 VKLLGMWFSPFAQRVRIALKLKGIPYEYVEEDLTN---KSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSG 86 (231)
T ss_pred EEEEEeecChHHHHHHHHHHhcCCceEEEecCCCC---CCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCC
Confidence 577775 5999999999999999999999999865 489999999 78999999999999999999999999999942
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHH
Q psy17288 117 YKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDI 196 (322)
Q Consensus 117 ~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~ 196 (322)
++++|.||.+||....|++++|.....+. + ..
T Consensus 87 -~~iLP~DPy~Ra~arfwa~~id~~~~~~~----------------------~---------------~~---------- 118 (231)
T KOG0406|consen 87 -PPILPSDPYERAQARFWAEYIDKKVFFVG----------------------R---------------FV---------- 118 (231)
T ss_pred -CCCCCCCHHHHHHHHHHHHHHHhHHHHHH----------------------H---------------HH----------
Confidence 89999999999999999988875321100 0 00
Q ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCcch-hhhhHhhhhhhhccc----C---C--c
Q psy17288 197 LLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN---NKGNETS-IAIKLGGRAHYVRIL----P---L--L 263 (322)
Q Consensus 197 y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~---l~Gd~~t-ADI~l~~~L~~l~~~----~---l--~ 263 (322)
-...+.+..+.+..++...|+.+|+.|.+. ..|+.+. .||++++.+.++... + . .
T Consensus 119 ------------~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~ 186 (231)
T KOG0406|consen 119 ------------VAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIE 186 (231)
T ss_pred ------------HhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCC
Confidence 000123445667888999999999999943 3677666 999999766655332 1 1 4
Q ss_pred chhhhhhhcccccccccccccccCcccccccccC
Q psy17288 264 SCHLQKKAHNQHFFVVNFGYFIRNPSQKIKLIPY 297 (322)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (322)
+..|.+.+|.+ +... +|+++++.|+.
T Consensus 187 ~~~P~L~~W~~-------~~~~-~~~V~~~~p~~ 212 (231)
T KOG0406|consen 187 EETPKLIKWIK-------RMKE-DEAVKAVLPDS 212 (231)
T ss_pred CCCccHHHHHH-------HHhc-ChhHHhhcCCH
Confidence 57888899999 5555 59998888753
No 14
>KOG0867|consensus
Probab=99.91 E-value=6e-24 Score=191.17 Aligned_cols=196 Identities=20% Similarity=0.251 Sum_probs=154.1
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCCC
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNGY 117 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~~ 117 (322)
++||+.+ |++|++|.+++.++|++|+.+.+++..+||.+++|+++||.|+||+|+|+|..++||.||+.||.++|. ..
T Consensus 3 ~~ly~~~~s~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~-~~ 81 (226)
T KOG0867|consen 3 LKLYGHLGSPPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYG-PL 81 (226)
T ss_pred ceEeecCCCcchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcC-CC
Confidence 5788887 999999999999999999999999999999999999999999999999999999999999999999997 32
Q ss_pred CC-CCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHH
Q psy17288 118 KR-LLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDI 196 (322)
Q Consensus 118 ~~-L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~ 196 (322)
.. |+|.+..+|+.|++|+.+-.+... +... ..+.+.+. +.
T Consensus 82 ~~~l~p~~~~~ra~v~~~l~~~~~~l~----------~~~~---~~~~~~p~-----------------~~--------- 122 (226)
T KOG0867|consen 82 GGILLPKDLKERAIVDQWLEFENGVLD----------PVTF---ERPILAPL-----------------LV--------- 122 (226)
T ss_pred CcccCCcCHHHHHHHHHHHHhhhcccc----------cccc---cceeeecc-----------------ee---------
Confidence 34 999999999999999976554322 1110 01111110 00
Q ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhh--ccc-C-Ccchhhhh
Q psy17288 197 LLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYV--RIL-P-LLSCHLQK 269 (322)
Q Consensus 197 y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l--~~~-~-l~~~~~~~ 269 (322)
....+....+....++.+.++.+|+.|.++ ++|+++| ||+.+++.+..+ ... . ....+++.
T Consensus 123 ------------~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v 190 (226)
T KOG0867|consen 123 ------------GLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKV 190 (226)
T ss_pred ------------cccCcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHH
Confidence 000134455667889999999999999996 8899988 999999999998 444 1 35677888
Q ss_pred hhcccccccccccccccCccccccc
Q psy17288 270 KAHNQHFFVVNFGYFIRNPSQKIKL 294 (322)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (322)
.+|++ +..++ |+.+++.
T Consensus 191 ~~W~~-------~~~~~-P~~~e~~ 207 (226)
T KOG0867|consen 191 ARWYE-------RIQKR-PAYEEAN 207 (226)
T ss_pred HHHHH-------HHHhC-ccHHHHH
Confidence 89999 55565 8865544
No 15
>PLN02378 glutathione S-transferase DHAR1
Probab=99.90 E-value=6.9e-23 Score=182.59 Aligned_cols=169 Identities=21% Similarity=0.295 Sum_probs=125.8
Q ss_pred cCCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCCCCCCCCC
Q psy17288 44 HDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNGYKRLLPT 123 (322)
Q Consensus 44 ~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~~~~L~P~ 123 (322)
..||+|+||+++|+++|++|+.+.|++..+ +++|+++||.|+||+|++||.+|+||.+|++||++++++ ..+.
T Consensus 18 ~~~p~~~rv~~~L~e~gl~~e~~~v~~~~~---~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~--~~l~-- 90 (213)
T PLN02378 18 GDCPFSQRALLTLEEKSLTYKIHLINLSDK---PQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPD--PPLK-- 90 (213)
T ss_pred CCCcchHHHHHHHHHcCCCCeEEEeCcccC---CHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCC--CCCC--
Confidence 449999999999999999999999998654 679999999999999999999999999999999999986 4453
Q ss_pred CHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHHHHHHHH
Q psy17288 124 DMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDILLDKATR 203 (322)
Q Consensus 124 ~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y~~k~~~ 203 (322)
++.+++.+..++... +..++.
T Consensus 91 ~~~~~a~i~~~~~~~-----------------------------~~~~~~------------------------------ 111 (213)
T PLN02378 91 TPAEFASVGSNIFGT-----------------------------FGTFLK------------------------------ 111 (213)
T ss_pred CHHHHHHHHHHHHHH-----------------------------HHHHHh------------------------------
Confidence 456666555432100 000000
Q ss_pred HHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHh--c--CCCCcch-hhhhHhhhhhhhccc-------CCcchhhhhhh
Q psy17288 204 QEQFNKELNNVQNYEQALERVDEVMNRIEAILIE--N--NKGNETS-IAIKLGGRAHYVRIL-------PLLSCHLQKKA 271 (322)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~--~--l~Gd~~t-ADI~l~~~L~~l~~~-------~l~~~~~~~~~ 271 (322)
.. . ..+.....+.+.|+.+|++|++ + ++|+++| |||++++.+.++.+. ++.+.+|.+.+
T Consensus 112 -----~~--~--~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~ 182 (213)
T PLN02378 112 -----SK--D--SNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHN 182 (213)
T ss_pred -----cC--C--hhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHH
Confidence 00 0 0012335667789999999983 2 7899988 999999998876432 23467888899
Q ss_pred cccccccccccccccCcccccccc
Q psy17288 272 HNQHFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~ 295 (322)
|.+ +..+ |||++.+..
T Consensus 183 w~~-------~~~~-rpa~~~~~~ 198 (213)
T PLN02378 183 YMK-------TLFS-LDSFEKTKT 198 (213)
T ss_pred HHH-------HHhc-CCCeecccC
Confidence 999 5566 499987764
No 16
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.89 E-value=1.5e-22 Score=182.68 Aligned_cols=172 Identities=15% Similarity=0.204 Sum_probs=129.2
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCC-CCCCCCCC
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNG-YKRLLPTD 124 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~-~~~L~P~~ 124 (322)
||+|+||+++|.+||++|+.+.+++... +++|+++||.|+||||+++|.+|+||.+|++||++++++. .+.+.|.+
T Consensus 19 cp~~~rv~i~L~ekgi~~e~~~vd~~~~---~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~ 95 (236)
T TIGR00862 19 CPFSQRLFMILWLKGVVFNVTTVDLKRK---PEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKH 95 (236)
T ss_pred CHhHHHHHHHHHHcCCCcEEEEECCCCC---CHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCC
Confidence 8999999999999999999999998754 7999999999999999999999999999999999999741 23455555
Q ss_pred HHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHHHHHHHHH
Q psy17288 125 MDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDILLDKATRQ 204 (322)
Q Consensus 125 ~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y~~k~~~~ 204 (322)
+..++....+.. .+..++.
T Consensus 96 ~~~~~~~~~l~~------------------------------~~~~~~~------------------------------- 114 (236)
T TIGR00862 96 PESNTAGLDIFA------------------------------KFSAYIK------------------------------- 114 (236)
T ss_pred HHHHHHHHHHHH------------------------------HHHHHHH-------------------------------
Confidence 544332211110 0000000
Q ss_pred HHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHh------------------c--CCCCcch-hhhhHhhhhhhhccc---
Q psy17288 205 EQFNKELNNVQNYEQALERVDEVMNRIEAILIE------------------N--NKGNETS-IAIKLGGRAHYVRIL--- 260 (322)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~------------------~--l~Gd~~t-ADI~l~~~L~~l~~~--- 260 (322)
. .+++..+++..++.+.|+.||+.|.+ + +.|+++| |||++++.|++++..
T Consensus 115 ----~--~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~ 188 (236)
T TIGR00862 115 ----N--SNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKK 188 (236)
T ss_pred ----c--CCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHH
Confidence 0 01122234556688899999999872 3 6899988 999999999999853
Q ss_pred --CC--cchhhhhhhcccccccccccccccCcccccccc
Q psy17288 261 --PL--LSCHLQKKAHNQHFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 261 --~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (322)
|+ .+..+++.+|.+ +.++| ||++.|.|
T Consensus 189 ~~~~~i~~~~p~l~~w~~-------~~~~~-~sf~~t~p 219 (236)
T TIGR00862 189 YRNFDIPAEFTGVWRYLS-------NAYAR-EEFTNTCP 219 (236)
T ss_pred HhCcCccccCchHHHHHH-------HHhcc-chHHhhCC
Confidence 44 578888899999 66775 99999976
No 17
>PRK10387 glutaredoxin 2; Provisional
Probab=99.89 E-value=2.8e-22 Score=177.45 Aligned_cols=203 Identities=13% Similarity=0.134 Sum_probs=130.0
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE-eCCeeecCHHHHHHHHHHhcCCC
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVEDNFSNG 116 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~-ddg~~L~ES~aI~~YL~~~~~~~ 116 (322)
++||++. ||+|+|||++|+++|++|+.+.++... +.. ..+.||.|+||+|+ +||..|+||.+|++||+++|++
T Consensus 1 ~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~--~~~--~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~- 75 (210)
T PRK10387 1 MKLYIYDHCPFCVKARMIFGLKNIPVELIVLANDD--EAT--PIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGK- 75 (210)
T ss_pred CEEEeCCCCchHHHHHHHHHHcCCCeEEEEcCCCc--hhh--HHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCC-
Confidence 4788877 999999999999999999998876432 222 26799999999995 8899999999999999999985
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHH
Q psy17288 117 YKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDI 196 (322)
Q Consensus 117 ~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~ 196 (322)
+ +++. .+++.+.+|+.+..... ...+.+.+.... .+.+.. +...+.
T Consensus 76 -~-~l~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~-----------------------~~~~~~ 121 (210)
T PRK10387 76 -P-LLTG--KRSPAIEEWLRKVFGYL------NKLLYPRFAKAD-LPEFAT-----------------------PSARQY 121 (210)
T ss_pred -c-cCCC--cccHHHHHHHHHHHHHh------hcchhcccccCC-CcccCC-----------------------HHHHHH
Confidence 3 4431 24677888886553211 111222211000 000000 000000
Q ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcch-hhhhHhhhhhhhcccCCcchhhhhhhccc
Q psy17288 197 LLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN-NKGNETS-IAIKLGGRAHYVRILPLLSCHLQKKAHNQ 274 (322)
Q Consensus 197 y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~-l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~~~~~~~~~ 274 (322)
++.+... ............+++.+++++.|+.+|+.|++. ++|+++| |||++++.+.++...+..+..|++.+|.+
T Consensus 122 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~l~G~~~s~ADi~l~~~l~~~~~~~~~~~~p~l~~w~~ 199 (210)
T PRK10387 122 FIDKKEA--SIGDFDALLAHTPGLIKEINADLRALDPLIVKPNAVNGELSTDDIHLFPILRNLTLVKGIEWPPRVADYRD 199 (210)
T ss_pred HHHhHHh--ccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcCccccCCCCCHHHHHHHHHHhcceeecCCCCCHHHHHHHH
Confidence 1000000 000000000111356788999999999999765 7899988 99999999999876533344578889998
Q ss_pred ccccccccccccCccc
Q psy17288 275 HFFVVNFGYFIRNPSQ 290 (322)
Q Consensus 275 ~~~~~~~~~~~~~~~~ 290 (322)
+..+| |++
T Consensus 200 -------r~~~r-~~~ 207 (210)
T PRK10387 200 -------NMSKK-TQV 207 (210)
T ss_pred -------HHHHH-hCC
Confidence 55554 654
No 18
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.87 E-value=1.3e-21 Score=179.87 Aligned_cols=167 Identities=22% Similarity=0.291 Sum_probs=126.9
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCCCCCCCCCCH
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNGYKRLLPTDM 125 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~~~~L~P~~~ 125 (322)
||+|+||+++|+++|++|+.+.+++.. ..++|+++||.|+||+|+++|.+|+||.+|++||++++++ +.|. ++
T Consensus 73 cp~s~rV~i~L~ekgi~ye~~~vdl~~---~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~--~~L~--~~ 145 (265)
T PLN02817 73 CPFCQRVLLTLEEKHLPYDMKLVDLTN---KPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPD--PPLA--TP 145 (265)
T ss_pred CcHHHHHHHHHHHcCCCCEEEEeCcCc---CCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCC--CCCC--CH
Confidence 799999999999999999999998854 4789999999999999998889999999999999999986 4553 46
Q ss_pred HHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHHHHHHHHHH
Q psy17288 126 DSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDILLDKATRQE 205 (322)
Q Consensus 126 ~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y~~k~~~~~ 205 (322)
.+++++.+|+... + . .++.. .
T Consensus 146 ~era~i~~~l~~~-------~--~--------------------~~~~~--------------~---------------- 166 (265)
T PLN02817 146 PEKASVGSKIFST-------F--I--------------------GFLKS--------------K---------------- 166 (265)
T ss_pred HHHHHHHHHHHHH-------H--H--------------------HHhcc--------------C----------------
Confidence 7788877664100 0 0 00000 0
Q ss_pred HHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCcch-hhhhHhhhhhhhccc-----C--Ccchhhhhhhccc
Q psy17288 206 QFNKELNNVQNYEQALERVDEVMNRIEAILIEN---NKGNETS-IAIKLGGRAHYVRIL-----P--LLSCHLQKKAHNQ 274 (322)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~---l~Gd~~t-ADI~l~~~L~~l~~~-----~--l~~~~~~~~~~~~ 274 (322)
+.. +...+++.+.|+.||+.|++. ++|+.+| |||++++.|.++... + +.+.+|.+++|.+
T Consensus 167 -------~~~--~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ 237 (265)
T PLN02817 167 -------DPG--DGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMK 237 (265)
T ss_pred -------Ccc--hHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHH
Confidence 000 012245667789999999842 7899999 999999998877542 2 3467888899999
Q ss_pred ccccccccccccCcccccccc
Q psy17288 275 HFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~ 295 (322)
+..+| ||++.+.+
T Consensus 238 -------ri~~r-ps~~~~~~ 250 (265)
T PLN02817 238 -------NIFSM-ESFVKTRA 250 (265)
T ss_pred -------HHhcc-hhHhhcCC
Confidence 66674 99998875
No 19
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.86 E-value=1e-20 Score=168.16 Aligned_cols=188 Identities=14% Similarity=0.136 Sum_probs=121.3
Q ss_pred EEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE-eCCeeecCHHHHHHHHHHhcCCCC
Q psy17288 40 ALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVEDNFSNGY 117 (322)
Q Consensus 40 ~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~-ddg~~L~ES~aI~~YL~~~~~~~~ 117 (322)
+||+.. ||+|+|||++|+++|++|+.+.+... ++ ....++||.|+||+|+ +||.+|+||.+|++||+++|+.
T Consensus 1 ~Ly~~~~sp~~~kvr~~L~~~gl~~e~~~~~~~--~~--~~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~-- 74 (209)
T TIGR02182 1 KLYIYDHCPFCVRARMIFGLKNIPVEKHVLLND--DE--ETPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGE-- 74 (209)
T ss_pred CeecCCCCChHHHHHHHHHHcCCCeEEEECCCC--cc--hhHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCC--
Confidence 477766 99999999999999999998766432 22 2348999999999998 8999999999999999999975
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHH
Q psy17288 118 KRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDIL 197 (322)
Q Consensus 118 ~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y 197 (322)
+.+.| ..++++.+|+++++.... ..++|.+.......+..+ .....+
T Consensus 75 ~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------------------------~~~~~~ 121 (209)
T TIGR02182 75 PLLTG---KVSPEIEAWLRKVTGYAN------KLLLPRFAKSDLPEFATQ------------------------SARKYF 121 (209)
T ss_pred ccCCC---CChHHHHHHHHHHHHHhh------hhhccccccCCCcccCCH------------------------HHHHHH
Confidence 33333 245667888776554321 113333221000000000 000000
Q ss_pred HHHHHHHHHHhhhcCCH----HHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCCcchhh-hh
Q psy17288 198 LDKATRQEQFNKELNNV----QNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPLLSCHL-QK 269 (322)
Q Consensus 198 ~~k~~~~~~~~~~~~~~----~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~~-~~ 269 (322)
.. .+....... ...++..+.+++.|+.||++|.++ + |+.+| |||++++.+.++...+..+ ++ ++
T Consensus 122 ~~------~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l-~g~~TiADi~l~~~l~~~~~~~~~~-~p~~l 193 (209)
T TIGR02182 122 TD------KKEASAGNFSALLNHTPGLLEEINADLEELDKLIDGPNAV-NGELSEDDILVFPLLRNLTLVAGIN-WPSRV 193 (209)
T ss_pred HH------HHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHhCcccc-CCCCCHHHHHHHHHhcCeeeecCCC-CChHH
Confidence 00 000110000 111345678899999999999887 5 44577 9999999999988764222 44 67
Q ss_pred hhccc
Q psy17288 270 KAHNQ 274 (322)
Q Consensus 270 ~~~~~ 274 (322)
.+|.+
T Consensus 194 ~~w~~ 198 (209)
T TIGR02182 194 ADYLD 198 (209)
T ss_pred HHHHH
Confidence 88888
No 20
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.84 E-value=3.5e-20 Score=164.07 Aligned_cols=177 Identities=16% Similarity=0.164 Sum_probs=121.7
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHH--------hhCCCCCccEEEeCCeeecCHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFL--------EVNPLGEVPVLVDGVKIIPDSKRIIQYV 109 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l--------~~nP~gkVPvL~ddg~~L~ES~aI~~YL 109 (322)
++|||++ ++++++||++|+++|++|+.+.++. +. ++|+ +.||.|+||+|++||.+|+||.||++||
T Consensus 5 ~~L~y~~~~~~~~~vrl~L~~~gi~ye~~~~~~----~~-~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~YL 79 (205)
T PTZ00057 5 IVLYYFDARGKAELIRLIFAYLGIEYTDKRFGE----NG-DAFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRYL 79 (205)
T ss_pred eEEEecCCCcchHHHHHHHHHcCCCeEEEeccc----cc-hHHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHHH
Confidence 7899987 9999999999999999999986632 21 2333 4899999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhc
Q psy17288 110 EDNFSNGYKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADV 189 (322)
Q Consensus 110 ~~~~~~~~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~ 189 (322)
+++++ +.+.+. ++++..|+-+. .... ++..+ ....
T Consensus 80 a~~~~-----~~~~~~--~~~~~~~~~~~-~~~~--------~~~~~---------------------------~~~~-- 114 (205)
T PTZ00057 80 SKKYK-----ICGESE--LNEFYADMIFC-GVQD--------IHYKF---------------------------NNTN-- 114 (205)
T ss_pred HHHcC-----CCCCCH--HHHHHHHHHHH-HHHH--------HHHHH---------------------------hhhH--
Confidence 99986 334433 33333343111 0000 00000 0000
Q ss_pred CCChhHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcch-hhhhHhhhhhhhcc-cCC-
Q psy17288 190 NPSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN----NKGNETS-IAIKLGGRAHYVRI-LPL- 262 (322)
Q Consensus 190 ~p~~~~~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~----l~Gd~~t-ADI~l~~~L~~l~~-~~l- 262 (322)
.+ . ....+...+.+.++|+.+|+.|+++ ++|+.+| ||++++..+.++.. .+.
T Consensus 115 ------~~----~-----------~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~~~~ 173 (205)
T PTZ00057 115 ------LF----K-----------QNETTFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKYPNS 173 (205)
T ss_pred ------HH----H-----------HHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhChhh
Confidence 00 0 0011334577899999999999853 6899988 99999999888653 343
Q ss_pred cchhhhhhhcccccccccccccccCccccccc
Q psy17288 263 LSCHLQKKAHNQHFFVVNFGYFIRNPSQKIKL 294 (322)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (322)
.+.+|.+.+|.+ +..+| |++++-.
T Consensus 174 l~~~P~l~~~~~-------r~~~~-P~~k~y~ 197 (205)
T PTZ00057 174 LKNFPLLKAHNE-------FISNL-PNIKNYI 197 (205)
T ss_pred hccChhHHHHHH-------HHHhC-hHHHHHH
Confidence 467888889988 55664 9987654
No 21
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.79 E-value=3.2e-19 Score=132.34 Aligned_cols=72 Identities=39% Similarity=0.601 Sum_probs=67.9
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
++||+++ |++|+|||++|+++|++|+.+.+++..+++..++|+++||.|+||+|++||.+|+||.+|++||+
T Consensus 1 ~~ly~~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 1 LVLYHWTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred CEEecCCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 3789987 99999999999999999999999998888888999999999999999999999999999999995
No 22
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.77 E-value=2.3e-18 Score=129.86 Aligned_cols=77 Identities=29% Similarity=0.466 Sum_probs=71.7
Q ss_pred eeEEeecCCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeC---CeeecCHHHHHHHHHHhcC
Q psy17288 38 LWALRYHDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDG---VKIIPDSKRIIQYVEDNFS 114 (322)
Q Consensus 38 ~~~Ly~~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~dd---g~~L~ES~aI~~YL~~~~~ 114 (322)
|++||++++|+|+|||++|+++|++|+.+.+++..+++..++|+++||.|+||+|+++ |..|+||.+|++||+++++
T Consensus 1 ~~~Ly~~~~~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~ 80 (81)
T cd03048 1 MITLYTHGTPNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYD 80 (81)
T ss_pred CeEEEeCCCCChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhC
Confidence 4789998899999999999999999999999987777788999999999999999976 8999999999999999886
No 23
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.75 E-value=3.9e-18 Score=126.10 Aligned_cols=73 Identities=30% Similarity=0.422 Sum_probs=68.5
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVED 111 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~ 111 (322)
++||+.+ |++|+|++++|+++|++|+.+.+++..+++..++|+++||.|+||+|+++|..|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 1 IDLYYLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CEEEeCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 4789887 999999999999999999999999888888889999999999999999999999999999999974
No 24
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.74 E-value=8e-18 Score=125.37 Aligned_cols=75 Identities=32% Similarity=0.531 Sum_probs=69.6
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhc
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 113 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~ 113 (322)
++||+++ |++|++|+++|+++|++|+.+.++...+++..++|.++||.|+||+|+++|..|+||.||++||+++|
T Consensus 1 ~~ly~~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 1 LKLYYDLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred CEEeeCCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 3688877 99999999999999999999999988877778899999999999999999999999999999999864
No 25
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.73 E-value=9.8e-18 Score=124.79 Aligned_cols=72 Identities=33% Similarity=0.541 Sum_probs=67.0
Q ss_pred EeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCC
Q psy17288 41 LRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSN 115 (322)
Q Consensus 41 Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~ 115 (322)
||+++ ||+|+|||++|+++||+|+.+.++...+ .+++.++||.|+||+|++||.+|+||.+|++||++++++
T Consensus 1 Ly~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~---~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~ 73 (75)
T PF13417_consen 1 LYGFPGSPYSQKVRLALEEKGIPYELVPVDPEEK---RPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPG 73 (75)
T ss_dssp EEEETTSHHHHHHHHHHHHHTEEEEEEEEBTTST---SHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTS
T ss_pred CCCcCCChHHHHHHHHHHHcCCeEEEeccCcccc---hhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCC
Confidence 67766 9999999999999999999999987654 789999999999999999999999999999999999986
No 26
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.73 E-value=1.4e-17 Score=124.36 Aligned_cols=76 Identities=29% Similarity=0.406 Sum_probs=69.6
Q ss_pred eEEeecCCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeC-CeeecCHHHHHHHHHHhcC
Q psy17288 39 WALRYHDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDG-VKIIPDSKRIIQYVEDNFS 114 (322)
Q Consensus 39 ~~Ly~~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~dd-g~~L~ES~aI~~YL~~~~~ 114 (322)
++||++++++++|||++|+++|++|+.+.++...+++..++|+++||.|+||+|+++ |..|+||.+|++||++++|
T Consensus 1 ~~Ly~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 1 MKLYYSPGACSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred CEEEeCCCCchHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 478988865799999999999999999999998888889999999999999999975 8999999999999999875
No 27
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.72 E-value=2.3e-17 Score=122.51 Aligned_cols=76 Identities=30% Similarity=0.492 Sum_probs=70.1
Q ss_pred eEEeecCCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcC
Q psy17288 39 WALRYHDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFS 114 (322)
Q Consensus 39 ~~Ly~~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~ 114 (322)
++||++++++++|||++|+++|++|+.+.++...+++..++|.+.||.++||+|+++|..|+||.+|++||+++++
T Consensus 1 ~~l~~~~~~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 1 ITLYHLPRSRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CEEEeCCCCChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 3788888789999999999999999999999876677789999999999999999999999999999999999874
No 28
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.72 E-value=2.2e-17 Score=122.79 Aligned_cols=74 Identities=27% Similarity=0.464 Sum_probs=68.8
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHh
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDN 112 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~ 112 (322)
++||+++ |++|+|+|++|+++|++|+.+.++...+++..++|.++||.|+||+|+++|..|+||.+|++||+++
T Consensus 2 ~~Ly~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 2 LKLYGAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred eEEEeCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 5899888 9999999999999999999999998777777889999999999999999999999999999999863
No 29
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.71 E-value=2.4e-17 Score=123.38 Aligned_cols=74 Identities=23% Similarity=0.204 Sum_probs=64.8
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEe--CCeeecCHHHHHHHHHHhc
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVD--GVKIIPDSKRIIQYVEDNF 113 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~d--dg~~L~ES~aI~~YL~~~~ 113 (322)
|++||+.+ ||+|+||+++|.++||+|+.+.++ .+++..+++++.||.|+||+|++ +|..++||.+|++||+++|
T Consensus 1 ~~~Ly~~~~sp~~~kv~~~L~~~gi~y~~~~v~--~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 1 PLELYEFEGSPFCRLVREVLTELELDVILYPCP--KGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred CceEecCCCCchHHHHHHHHHHcCCcEEEEECC--CChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 46899986 999999999999999999997664 34455788999999999999996 4789999999999999875
No 30
>KOG1695|consensus
Probab=99.71 E-value=1.9e-16 Score=139.36 Aligned_cols=189 Identities=16% Similarity=0.197 Sum_probs=138.4
Q ss_pred cceeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcC
Q psy17288 36 CCLWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFS 114 (322)
Q Consensus 36 ~~~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~ 114 (322)
|..|+|+|+. ..++.-+|++++..|++|+.+.+...+. -+......|.|+||+|..||..|.+|.||++||+++++
T Consensus 1 m~~ykL~Yf~~RG~ae~iR~lf~~a~v~fEd~r~~~~~~---w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~g 77 (206)
T KOG1695|consen 1 MPPYKLTYFNIRGLAEPIRLLFAYAGVSFEDKRITMEDA---WEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFG 77 (206)
T ss_pred CCceEEEecCcchhHHHHHHHHHhcCCCcceeeeccccc---hhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHhC
Confidence 4568999998 9999999999999999999999977642 23344558999999999999999999999999999986
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChh
Q psy17288 115 NGYKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSIS 194 (322)
Q Consensus 115 ~~~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~ 194 (322)
|.+.++.+.++++...+...++.... .+....
T Consensus 78 -----l~Gkt~~E~a~vD~i~d~~~D~~~~~----------------------~~~~~~--------------------- 109 (206)
T KOG1695|consen 78 -----LAGKTEEEEAWVDMIVDQFKDFRWEI----------------------FRQPYT--------------------- 109 (206)
T ss_pred -----cCCCCHHHHHHHHHHHHhhhhHHHHH----------------------HHHhhh---------------------
Confidence 99999999999888875443321100 000000
Q ss_pred HHHHHHHHHHHHHhhhcCCHHHHH-HHHHHHHHHHHHHHHHHHhc----CCCCcch-hhhhHhhhhhhhcc-c--CCcch
Q psy17288 195 DILLDKATRQEQFNKELNNVQNYE-QALERVDEVMNRIEAILIEN----NKGNETS-IAIKLGGRAHYVRI-L--PLLSC 265 (322)
Q Consensus 195 ~~y~~k~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~lE~~L~~~----l~Gd~~t-ADI~l~~~L~~l~~-~--~l~~~ 265 (322)
. ......++.++ -......+.+..+++.|.++ ++||..| ||+.++..+..+.. + ...+.
T Consensus 110 ----~--------~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~~~~~~ 177 (206)
T KOG1695|consen 110 ----A--------PEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDPSALDH 177 (206)
T ss_pred ----h--------hhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCchhhcc
Confidence 0 00001122222 34556678899999999954 7899988 99999999999877 3 33556
Q ss_pred hhhhhhcccccccccccccccCcccccccc
Q psy17288 266 HLQKKAHNQHFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (322)
.|.++++.+ +.... |.+|.=+-
T Consensus 178 ~P~L~a~~~-------kv~~~-p~ik~~i~ 199 (206)
T KOG1695|consen 178 FPKLKAFKE-------RVSSI-PNIKKYLE 199 (206)
T ss_pred ChHHHHHHH-------HHhcC-chHHHHHh
Confidence 688889999 55554 87765543
No 31
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.71 E-value=3e-17 Score=120.72 Aligned_cols=72 Identities=26% Similarity=0.317 Sum_probs=67.3
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
++||+++ |++|+++|++|+++|++|+.+.+++..+++..++|.++||.|+||+|+++|..|+||.+|++||+
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 1 MKLYGFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4789888 99999999999999999999999987777888999999999999999999999999999999984
No 32
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.71 E-value=3e-17 Score=121.33 Aligned_cols=72 Identities=26% Similarity=0.322 Sum_probs=66.1
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
++||+++ |++++|||++|+++|++|+.+.++...+++..++|.++||.|+||+|+++|..|+||.+|++||+
T Consensus 1 ~~l~~~~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 1 LTIWGRRSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred CEEEecCCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 3788877 99999999999999999999999876666778999999999999999999999999999999984
No 33
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.70 E-value=7.7e-17 Score=118.70 Aligned_cols=72 Identities=26% Similarity=0.381 Sum_probs=65.4
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhc
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 113 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~ 113 (322)
++||+.+ ||+|+|++++|+++|++|+.+.++.. +..++|++.||.|+||+|+++|..++||.+|++||++++
T Consensus 1 ~~ly~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 1 MTLYSGPDDVYSHRVRIVLAEKGVSVEIIDVDPD---NPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred CEEEECCCChhHHHHHHHHHHcCCccEEEEcCCC---CCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 4788876 99999999999999999999988764 447899999999999999999999999999999999864
No 34
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.69 E-value=6.7e-17 Score=118.97 Aligned_cols=72 Identities=36% Similarity=0.442 Sum_probs=66.3
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE-eCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~-ddg~~L~ES~aI~~YL~ 110 (322)
++||+.+ |++|+|+|++|+++|++|+.+.+++..+++..++|.++||.|+||+|+ ++|..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 1 MKLYDSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred CEEEeCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 4789988 999999999999999999999999877777788999999999999999 58889999999999995
No 35
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.69 E-value=1.1e-16 Score=118.51 Aligned_cols=72 Identities=22% Similarity=0.312 Sum_probs=64.6
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCC-CCccEEEeCCeeecCHHHHHHHHHHhc
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPL-GEVPVLVDGVKIIPDSKRIIQYVEDNF 113 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~-gkVPvL~ddg~~L~ES~aI~~YL~~~~ 113 (322)
++||+.+ ||+|+|+|++|+++|++|+.+.++.. +..++|.+.||. |+||+|+++|..++||.+|++||++++
T Consensus 1 ~~Ly~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~---~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 1 VKLLGAWASPFVLRVRIALALKGVPYEYVEEDLG---NKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred CEEEECCCCchHHHHHHHHHHcCCCCEEEEeCcc---cCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 3788876 99999999999999999999988775 347899999995 999999999999999999999999864
No 36
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.69 E-value=8e-17 Score=119.82 Aligned_cols=72 Identities=19% Similarity=0.184 Sum_probs=65.9
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEe-CCeeecCHHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVD-GVKIIPDSKRIIQYVED 111 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~d-dg~~L~ES~aI~~YL~~ 111 (322)
++||+++ |++|+++|++|+++|++|+.+.+++..+ +..++|+++||.|+||+|++ +|..|+||.||++||++
T Consensus 1 ~~Ly~~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~-~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 1 GTLYTYPGNPRSLKILAAAKYNGLDVEIVDFQPGKE-NKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred CeEecCCCCccHHHHHHHHHHcCCceEEEecccccc-cCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 3789888 8999999999999999999999998654 77899999999999999995 68999999999999986
No 37
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.69 E-value=1.2e-16 Score=123.03 Aligned_cols=68 Identities=16% Similarity=0.317 Sum_probs=63.6
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCC
Q psy17288 45 DKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSN 115 (322)
Q Consensus 45 ~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~ 115 (322)
.||||+|||++|.+|||+|+.+.+++.+. .++|+++||.|+||+|+++|.+|+||.+|++||++++..
T Consensus 21 ~cpf~~rvrl~L~eKgi~ye~~~vd~~~~---p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~ 88 (91)
T cd03061 21 NCPFCQRLFMVLWLKGVVFNVTTVDMKRK---PEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCP 88 (91)
T ss_pred CChhHHHHHHHHHHCCCceEEEEeCCCCC---CHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccC
Confidence 37999999999999999999999988654 789999999999999999999999999999999999875
No 38
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.68 E-value=1.2e-16 Score=117.62 Aligned_cols=72 Identities=29% Similarity=0.355 Sum_probs=66.6
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
++||+++ |++|+++|++|+++|++|+.+.+++..+++..++|.+.||.|+||+|+++|..++||.||++||+
T Consensus 1 ~~L~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 1 MILYSYFRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred CEEecCCCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 3788765 99999999999999999999999987777778999999999999999999999999999999995
No 39
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.68 E-value=1.8e-16 Score=118.38 Aligned_cols=72 Identities=26% Similarity=0.517 Sum_probs=63.5
Q ss_pred EEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCC-CCccEEEeC-CeeecCHHHHHHHHHH
Q psy17288 40 ALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPL-GEVPVLVDG-VKIIPDSKRIIQYVED 111 (322)
Q Consensus 40 ~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~-gkVPvL~dd-g~~L~ES~aI~~YL~~ 111 (322)
+|++++ +.++.++|++|+++|++|+.+.+++..+++..++|.+.||. |+||+|+++ |..|+||.||++||++
T Consensus 2 ~l~l~~~~~~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 2 TLTLYNGRGRSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp EEEEESSSTTTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 444444 45999999999999999999999999898888999999999 999999998 9999999999999985
No 40
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.68 E-value=8.1e-17 Score=119.24 Aligned_cols=70 Identities=14% Similarity=0.325 Sum_probs=63.9
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVED 111 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~ 111 (322)
++||+++ |++|+++|++|+++|++|+.+.++.. +..+++.++||.|+||+|+++|..|+||.+|++||++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~L~~~~i~~e~~~v~~~---~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 2 YTLTYFPVRGRAEAIRLLLADQGISWEEERVTYE---EWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred cEEEEeCCcchHHHHHHHHHHcCCCCEEEEecHH---HhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 6899988 99999999999999999999988762 3356899999999999999999999999999999986
No 41
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.67 E-value=1.1e-16 Score=117.88 Aligned_cols=71 Identities=18% Similarity=0.308 Sum_probs=63.1
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVED 111 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~ 111 (322)
|+||+++ |++|++||++|+++|++|+.+.++...+ ..++|.+.||.|+||+|+++|..|+||.+|++||++
T Consensus 1 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~~~~~~~--~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 1 YKLTYFNIRGRGEPIRLLLADAGVEYEDVRITYEEW--PELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred CEEEEEcCcchHHHHHHHHHHCCCCcEEEEeCHHHh--hhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 5789887 9999999999999999999999887533 234588999999999999999999999999999974
No 42
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.65 E-value=3.6e-16 Score=118.55 Aligned_cols=74 Identities=19% Similarity=0.376 Sum_probs=63.8
Q ss_pred EEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCC-chhHHhh-----CCCCCccEEEeCCeeecCHHHHHHHHHHh
Q psy17288 40 ALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQY-ESWFLEV-----NPLGEVPVLVDGVKIIPDSKRIIQYVEDN 112 (322)
Q Consensus 40 ~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~-~~~~l~~-----nP~gkVPvL~ddg~~L~ES~aI~~YL~~~ 112 (322)
+|||+. +++|+++|++|+++|++|+.+.+++..+++. .+++.+. +|.|+||+|++||..|+||.||++||+++
T Consensus 2 ~l~y~~~~~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~~ 81 (82)
T cd03075 2 TLGYWDIRGLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIARK 81 (82)
T ss_pred EEEEeCCccccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhhc
Confidence 678877 9999999999999999999999998876654 3555432 29999999999999999999999999986
Q ss_pred c
Q psy17288 113 F 113 (322)
Q Consensus 113 ~ 113 (322)
+
T Consensus 82 ~ 82 (82)
T cd03075 82 H 82 (82)
T ss_pred C
Confidence 4
No 43
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.65 E-value=5.4e-16 Score=114.04 Aligned_cols=67 Identities=24% Similarity=0.288 Sum_probs=61.2
Q ss_pred EEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEe-CCeeecCHHHHHHHH
Q psy17288 40 ALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVD-GVKIIPDSKRIIQYV 109 (322)
Q Consensus 40 ~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~d-dg~~L~ES~aI~~YL 109 (322)
+||+.+ ||+|+||+++|+++|++|+.+.+++... .++|+++||.|+||+|++ ||..|+||.+|++|+
T Consensus 2 ~ly~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~~---~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 2 ILYSFRRCPYAMRARMALLLAGITVELREVELKNK---PAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred EEEecCCCcHHHHHHHHHHHcCCCcEEEEeCCCCC---CHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 678776 9999999999999999999999988643 689999999999999996 599999999999997
No 44
>PLN02907 glutamate-tRNA ligase
Probab=99.65 E-value=1.4e-15 Score=156.33 Aligned_cols=149 Identities=11% Similarity=0.026 Sum_probs=118.1
Q ss_pred eEEeecCCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE-eCCeeecCHHHHHHHHHHhcCCCC
Q psy17288 39 WALRYHDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVEDNFSNGY 117 (322)
Q Consensus 39 ~~Ly~~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~-ddg~~L~ES~aI~~YL~~~~~~~~ 117 (322)
++||+.+++++.++.++|++.|++|+.+. .+|.|+||+|+ +||..|+||.||++||++.+++
T Consensus 3 ~kLy~~~~S~~~~v~~~L~~lgv~~e~~~---------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~-- 65 (722)
T PLN02907 3 AKLSFPPDSPPLAVIAAAKVAGVPLTIDP---------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASL-- 65 (722)
T ss_pred EEEEECCCCChHHHHHHHHHcCCCcEEee---------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCC--
Confidence 68999997788899999999999999863 25899999999 5889999999999999999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHH
Q psy17288 118 KRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDIL 197 (322)
Q Consensus 118 ~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y 197 (322)
..|+|.++.+++++.+|+.+++.+.
T Consensus 66 ~~L~p~d~~erAqV~qWL~~~~~~~------------------------------------------------------- 90 (722)
T PLN02907 66 PGFYGQDAFESSQVDEWLDYAPTFS------------------------------------------------------- 90 (722)
T ss_pred cCCCCCCHHHHHHHHHHHHHHhhcc-------------------------------------------------------
Confidence 6799999999999999986543200
Q ss_pred HHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhh--cccC--Ccchhhhhh
Q psy17288 198 LDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYV--RILP--LLSCHLQKK 270 (322)
Q Consensus 198 ~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l--~~~~--l~~~~~~~~ 270 (322)
. ...+.+.|+.||++|+.+ ++|+++| |||++++.+.++ .+.+ ....+|++.
T Consensus 91 ---------------~-------~~~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~ 148 (722)
T PLN02907 91 ---------------S-------GSEFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLV 148 (722)
T ss_pred ---------------c-------HHHHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHH
Confidence 0 012346788999999876 7899988 999999988655 2222 245678888
Q ss_pred hcccccccccccccccCcc
Q psy17288 271 AHNQHFFVVNFGYFIRNPS 289 (322)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~ 289 (322)
+|.+ ....| ||
T Consensus 149 RW~e-------rI~ar-Ps 159 (722)
T PLN02907 149 RWFN-------SISAE-YS 159 (722)
T ss_pred HHHH-------HHHhC-CC
Confidence 8988 44554 88
No 45
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.62 E-value=1.1e-15 Score=112.25 Aligned_cols=67 Identities=37% Similarity=0.606 Sum_probs=58.0
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeC-CCCCCCchhHHhhCCCCCccEEEe-CCeeecCHHHHHHHHHHh
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNL-ASNEQYESWFLEVNPLGEVPVLVD-GVKIIPDSKRIIQYVEDN 112 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~-~~~e~~~~~~l~~nP~gkVPvL~d-dg~~L~ES~aI~~YL~~~ 112 (322)
||+|+||+++|+++|++|+...+.. ..+.+..++|.++||.|+||+|++ +|.+++||.+|++||+++
T Consensus 2 sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 2 SPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp -HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred chHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 8999999999999999999988854 344556789999999999999996 899999999999999973
No 46
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.61 E-value=1.5e-15 Score=112.08 Aligned_cols=69 Identities=35% Similarity=0.478 Sum_probs=61.6
Q ss_pred eEEeecC-CchHHHHHHHHHh--cCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE-eCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHE--KKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~e--kgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~-ddg~~L~ES~aI~~YL~ 110 (322)
++||+++ |++|+|+|++|++ +|++|+.+.++.. +..++|++.||.|+||+|+ +||..++||.+|++||+
T Consensus 1 ~~Ly~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 1 MKLLYSPTSPYVRKVRVAAHETGLGDDVELVLVNPW---SDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred CEEecCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcc---cCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 4788877 9999999999999 8899999988753 3478999999999999999 58899999999999985
No 47
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.61 E-value=1.9e-15 Score=110.97 Aligned_cols=69 Identities=14% Similarity=0.191 Sum_probs=58.8
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeC-CeeecCHHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDG-VKIIPDSKRIIQYVED 111 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~dd-g~~L~ES~aI~~YL~~ 111 (322)
++||+++ ||+|+|||++|.++|++|+.+.++... ....++.||.++||+|+++ |..++||.+|++||++
T Consensus 1 ~~Ly~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~----~~~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 1 MKLYIYEHCPFCVKARMIAGLKNIPVEQIILQNDD----EATPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred CceEecCCCcHhHHHHHHHHHcCCCeEEEECCCCc----hHHHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 3688876 999999999999999999998876432 2345688999999999964 8999999999999974
No 48
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.61 E-value=2.3e-15 Score=115.82 Aligned_cols=71 Identities=27% Similarity=0.402 Sum_probs=63.5
Q ss_pred ceeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeC-CeeecCHHHHHHHHH
Q psy17288 37 CLWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDG-VKIIPDSKRIIQYVE 110 (322)
Q Consensus 37 ~~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~dd-g~~L~ES~aI~~YL~ 110 (322)
.+++||+.+ ||+|+||+++|.++|++|+.+.++... ..++|.+.||.++||+|+++ |..|+||.+|++|||
T Consensus 17 ~~~~Ly~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~---~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 17 GIIRLYSMRFCPYAQRARLVLAAKNIPHEVININLKD---KPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred CcEEEEeCCCCchHHHHHHHHHHcCCCCeEEEeCCCC---CcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 346899887 999999999999999999999888754 35779999999999999965 899999999999996
No 49
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.60 E-value=4e-15 Score=111.94 Aligned_cols=70 Identities=14% Similarity=0.302 Sum_probs=60.3
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhC-----CCCCccEEEeCCeeecCHHHHHHHHHHh
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVN-----PLGEVPVLVDGVKIIPDSKRIIQYVEDN 112 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~n-----P~gkVPvL~ddg~~L~ES~aI~~YL~~~ 112 (322)
++||+++ |++|+++||+|+++|++|+.+.++.. ++|.+.| |.|+||+|++||..|+||.||++||+++
T Consensus 2 ~~Ly~~~~~~~~~~v~~~l~~~gi~~e~~~v~~~------~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~ 75 (79)
T cd03077 2 PVLHYFNGRGRMESIRWLLAAAGVEFEEKFIESA------EDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGK 75 (79)
T ss_pred CEEEEeCCCChHHHHHHHHHHcCCCcEEEEeccH------HHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHH
Confidence 4789988 89999999999999999999988753 3333333 5899999999999999999999999998
Q ss_pred cC
Q psy17288 113 FS 114 (322)
Q Consensus 113 ~~ 114 (322)
++
T Consensus 76 ~~ 77 (79)
T cd03077 76 YN 77 (79)
T ss_pred cC
Confidence 75
No 50
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.60 E-value=2.4e-15 Score=114.26 Aligned_cols=69 Identities=28% Similarity=0.362 Sum_probs=61.2
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeC-CeeecCHHHHHHHHHHhcC
Q psy17288 45 DKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDG-VKIIPDSKRIIQYVEDNFS 114 (322)
Q Consensus 45 ~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~dd-g~~L~ES~aI~~YL~~~~~ 114 (322)
.|++|+|||++|.++|++|+.+.++....++..+++ ++||.|+||+|+++ |..|+||.+|++||+++|+
T Consensus 15 ~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 15 FSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred cCChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 399999999999999999999999876655545555 89999999999987 8999999999999999874
No 51
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.58 E-value=6.9e-15 Score=109.36 Aligned_cols=66 Identities=21% Similarity=0.285 Sum_probs=58.1
Q ss_pred eEEeecC--------CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD--------KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~--------Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
++||.++ ||+|+||+++|+++|++|+.+.++. .+.||.|+||+|+++|..|+||.+|++||+
T Consensus 2 ~~L~~~~~~~~~~~~sp~~~~v~~~L~~~gi~~~~~~~~~----------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~ 71 (75)
T cd03080 2 ITLYQFPRAFGVPSLSPFCLKVETFLRMAGIPYENKFGGL----------AKRSPKGKLPFIELNGEKIADSELIIDHLE 71 (75)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHCCCCcEEeecCc----------ccCCCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 4677653 8999999999999999999887653 268999999999999999999999999999
Q ss_pred HhcC
Q psy17288 111 DNFS 114 (322)
Q Consensus 111 ~~~~ 114 (322)
++|+
T Consensus 72 ~~~~ 75 (75)
T cd03080 72 EKYG 75 (75)
T ss_pred HHcC
Confidence 9874
No 52
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.58 E-value=7.5e-15 Score=108.70 Aligned_cols=67 Identities=30% Similarity=0.403 Sum_probs=60.4
Q ss_pred ecCCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 43 YHDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 43 ~~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
+..|++|+|||++|+++|++|+.+.++...+ ...++|.++||.|+||+|+++|.+|+||.+|++||+
T Consensus 7 ~~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~-~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 7 KNYSSWSLRPWLLLKAAGIPFEEILVPLYTP-DTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred CCCCHHHHHHHHHHHHcCCCCEEEEeCCCCc-cccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 3459999999999999999999999987654 346899999999999999999999999999999984
No 53
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.54 E-value=2.2e-14 Score=106.95 Aligned_cols=70 Identities=20% Similarity=0.137 Sum_probs=59.7
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeC----CeeecCHHHHHHHHHHhc
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDG----VKIIPDSKRIIQYVEDNF 113 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~dd----g~~L~ES~aI~~YL~~~~ 113 (322)
++||+.+ ||+|+|+|++|.++|++|+.+.++... .++ ++.||.++||+|+++ |.+|+||.+|++||++..
T Consensus 2 i~Ly~~~~~p~c~kv~~~L~~~gi~y~~~~~~~~~----~~~-~~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~ 76 (77)
T cd03040 2 ITLYQYKTCPFCCKVRAFLDYHGIPYEVVEVNPVS----RKE-IKWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYL 76 (77)
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCceEEEECCchh----HHH-HHHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHc
Confidence 5889877 999999999999999999998776532 223 467999999999954 789999999999999864
No 54
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.46 E-value=2.2e-13 Score=97.82 Aligned_cols=70 Identities=36% Similarity=0.572 Sum_probs=61.3
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
++||+++ ||+|+|++++|+++|++|+.+.++..... ..++.+.+|.+++|+|+++|..++||.+|++||+
T Consensus 1 ~~ly~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 1 LKLYYFPGSPRSLRVRLALEEKGLPYELVPVDLGEGE--QEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred CEEEeCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCC--CHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 4788877 99999999999999999999988765432 2268899999999999999999999999999984
No 55
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.38 E-value=1.4e-12 Score=95.98 Aligned_cols=57 Identities=23% Similarity=0.307 Sum_probs=52.1
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHh
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDN 112 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~ 112 (322)
||+|+|++++|+++|++|+.+.++.. .+||.|+||+|+++|..++||.+|++||+++
T Consensus 16 sp~~~~v~~~L~~~~i~~~~~~~~~~----------~~~p~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 16 SPECLKVETYLRMAGIPYEVVFSSNP----------WRSPTGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred CHHHHHHHHHHHhCCCceEEEecCCc----------ccCCCcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 89999999999999999999987642 2789999999999999999999999999874
No 56
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=1e-10 Score=98.70 Aligned_cols=91 Identities=18% Similarity=0.241 Sum_probs=69.0
Q ss_pred EEee-cCCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE-eCCeeecCHHHHHHHHHHhcCCCC
Q psy17288 40 ALRY-HDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVEDNFSNGY 117 (322)
Q Consensus 40 ~Ly~-~~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~-ddg~~L~ES~aI~~YL~~~~~~~~ 117 (322)
+||- ..||||.|+|++...+|||++.+.....+.+ .-..+-...+||+|+ +||..+.||..|++|+++..+.
T Consensus 2 kLYIYdHCPfcvrarmi~Gl~nipve~~vL~nDDe~----Tp~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~-- 75 (215)
T COG2999 2 KLYIYDHCPFCVRARMIFGLKNIPVELHVLLNDDEE----TPIRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGK-- 75 (215)
T ss_pred ceeEeccChHHHHHHHHhhccCCChhhheeccCccc----ChhhhhcccccceEEccccccchhhhHHHHHHHHhcCc--
Confidence 5664 4499999999999999999998877554422 223555678999999 8999999999999999999875
Q ss_pred CCCCCCCHHHHHHHHHHHHHhc
Q psy17288 118 KRLLPTDMDSKMDVIALRDEID 139 (322)
Q Consensus 118 ~~L~P~~~~~ra~v~~~~~~~d 139 (322)
+++-. ..+-.++.|++.+.
T Consensus 76 -~~lt~--~~~pai~~wlrkv~ 94 (215)
T COG2999 76 -PLLTG--KVRPAIEAWLRKVN 94 (215)
T ss_pred -hhhcc--CcCHHHHHHHHHhc
Confidence 44433 23455677876554
No 57
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.19 E-value=4.9e-11 Score=88.25 Aligned_cols=59 Identities=29% Similarity=0.392 Sum_probs=49.4
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHh
Q psy17288 45 DKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDN 112 (322)
Q Consensus 45 ~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~ 112 (322)
.+++|.|++++|++.|++|+.+. ...++ ..+|.|+||+|++||.+|+||.+|+.||+++
T Consensus 16 ~~~~~~kv~~~L~elglpye~~~--~~~~~-------~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 16 DNASCLAVQTFLKMCNLPFNVRC--RANAE-------FMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CCCCHHHHHHHHHHcCCCcEEEe--cCCcc-------ccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 47999999999999999999873 22211 1567899999999999999999999999863
No 58
>KOG1422|consensus
Probab=99.18 E-value=6.4e-10 Score=96.45 Aligned_cols=67 Identities=31% Similarity=0.575 Sum_probs=64.0
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCC
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSN 115 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~ 115 (322)
||+|+++-+.|.++|++|....||+... ++||+++.|.|++|+|..|+.+++||..|-++|+++++.
T Consensus 21 cpf~qr~~m~L~~k~~~f~vttVd~~~k---p~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~ 87 (221)
T KOG1422|consen 21 CPFCQRLFMTLELKGVPFKVTTVDLSRK---PEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPP 87 (221)
T ss_pred ChhHHHHHHHHHHcCCCceEEEeecCCC---cHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCC
Confidence 8999999999999999999999998765 889999999999999999999999999999999999986
No 59
>KOG4244|consensus
Probab=98.95 E-value=2.5e-08 Score=89.55 Aligned_cols=183 Identities=14% Similarity=0.053 Sum_probs=114.3
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCCCCCCCCCCH
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNGYKRLLPTDM 125 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~~~~L~P~~~ 125 (322)
||+|.||...|...+||||.+...+ ...+..|++|.++-+|..+.||.-|..+|.+++.- +..+++
T Consensus 61 SPfClKvEt~lR~~~IpYE~~~~~~----------~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~--~~~L~~-- 126 (281)
T KOG4244|consen 61 SPFCLKVETFLRAYDIPYEIVDCSL----------KRRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKI--PDDLSA-- 126 (281)
T ss_pred ChHHHHHHHHHHHhCCCceeccccc----------eeeccCCCcceEEeCCeeccccHHHHHHHHHHcCC--CCCCCH--
Confidence 9999999999999999999874432 24567999999999999999999999999998874 332443
Q ss_pred HHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHHHHHHHHHH
Q psy17288 126 DSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDILLDKATRQE 205 (322)
Q Consensus 126 ~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y~~k~~~~~ 205 (322)
.+++...+...++|....+...+.-...+.+ ....+..+.--.. ....+..+. +...+-.+...+.
T Consensus 127 e~~a~s~Al~rm~dnhL~~~l~y~k~~~~~~--------~~~~~~~~~l~~~-l~~~l~~~~-----~~~~f~~kv~~r~ 192 (281)
T KOG4244|consen 127 EQRAQSRALSRMADNHLFWILLYYKGADDAW--------LNTDRKLIGLPGF-LFPLLLPLF-----WKAIFGKKVYKRS 192 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHH--------HHHHHhccCcccc-chHHHHHHH-----HHHHHHHHHHHHh
Confidence 6778888888888866555443332222221 1111111110000 000000000 0111112222222
Q ss_pred HHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcc
Q psy17288 206 QFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRI 259 (322)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~ 259 (322)
... ...-..++..+-+.+-|..++..|.++ +.|+..+ +|..+.+.|..+..
T Consensus 193 ~g~---IG~f~~~Ei~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y 246 (281)
T KOG4244|consen 193 TGA---IGDFESAEIDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY 246 (281)
T ss_pred hcc---ccCcCHHHHHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec
Confidence 222 111223336677789999999999986 8899966 99999999887765
No 60
>KOG3029|consensus
Probab=98.89 E-value=7.2e-08 Score=87.07 Aligned_cols=70 Identities=19% Similarity=0.103 Sum_probs=57.2
Q ss_pred ceeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHH
Q psy17288 37 CLWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVED 111 (322)
Q Consensus 37 ~~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~ 111 (322)
..+.||.+. ||||-|||.+|.+.||+|+.++||+... .-.+-+-..+||+|..+|..+.||.+|+.-|+.
T Consensus 89 L~l~LyQyetCPFCcKVrAFLDyhgisY~VVEVnpV~r-----~eIk~SsykKVPil~~~Geqm~dSsvIIs~laT 159 (370)
T KOG3029|consen 89 LDLVLYQYETCPFCCKVRAFLDYHGISYAVVEVNPVLR-----QEIKWSSYKKVPILLIRGEQMVDSSVIISLLAT 159 (370)
T ss_pred ceEEEEeeccCchHHHHHHHHhhcCCceEEEEecchhh-----hhccccccccccEEEeccceechhHHHHHHHHH
Confidence 456888876 9999999999999999999999987642 122334578999999767789999999988754
No 61
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.87 E-value=8.2e-09 Score=82.59 Aligned_cols=92 Identities=20% Similarity=0.244 Sum_probs=78.4
Q ss_pred CChhHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHh------------cCCCCcch-hhhhHhhhhhhh
Q psy17288 191 PSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIE------------NNKGNETS-IAIKLGGRAHYV 257 (322)
Q Consensus 191 p~~~~~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~------------~l~Gd~~t-ADI~l~~~L~~l 257 (322)
|+..+.|..|+...+.+....++.+.+++...++.+.|+.||++|++ .++|+.+| |||++++.+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~ 80 (111)
T cd03204 1 PDLATAYIAKQKKLKSKLLDHDNVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRL 80 (111)
T ss_pred CcHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHH
Confidence 45678898999999999999999999999999999999999999984 37899988 999999999998
Q ss_pred cccCCc------chhhhhhhcccccccccccccccCccc
Q psy17288 258 RILPLL------SCHLQKKAHNQHFFVVNFGYFIRNPSQ 290 (322)
Q Consensus 258 ~~~~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (322)
...++. ..+|++.+|.+ +..+| ||+
T Consensus 81 ~~~~~~~~~~~~~~~P~l~~w~~-------rv~aR-psf 111 (111)
T cd03204 81 KFLGLSRRYWGNGKRPNLEAYFE-------RVLQR-ESF 111 (111)
T ss_pred HHcCccccccccccChHHHHHHH-------HHHcC-CCC
Confidence 876653 35788889988 55664 875
No 62
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=98.66 E-value=1.1e-07 Score=71.35 Aligned_cols=70 Identities=20% Similarity=0.150 Sum_probs=59.2
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
.++||..+ ||+|.+++.+|..+|++|+.+.++-. ....++...++..+||++..+|..+.++..|.+||+
T Consensus 9 ~V~ly~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~---~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 9 SVVVFTKPGCPFCAKAKATLKEKGYDFEEIPLGND---ARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred CEEEEECCCCHhHHHHHHHHHHcCCCcEEEECCCC---hHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 36889877 99999999999999999998766532 224566677888999999999999999999999984
No 63
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=98.66 E-value=1.1e-07 Score=70.33 Aligned_cols=57 Identities=21% Similarity=0.252 Sum_probs=49.1
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHh
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDN 112 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~ 112 (322)
||+|.|+.++|+..|++|+.+..+- ....|.|++|+|+++|..+.||..|++||.++
T Consensus 16 sp~clk~~~~Lr~~~~~~~v~~~~n----------~~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 16 DPECLAVLAYLKFAGAPLKVVPSNN----------PWRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred CHHHHHHHHHHHcCCCCEEEEecCC----------CCCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 8999999999999999998763321 13458999999999999999999999999864
No 64
>PRK10638 glutaredoxin 3; Provisional
Probab=98.52 E-value=3.8e-07 Score=68.87 Aligned_cols=71 Identities=8% Similarity=0.042 Sum_probs=59.5
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
.+++|..+ ||+|.+++.+|+++|++|+.+.++... ...+++.+.++..+||+|..+|..+.....+..+-.
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~--~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~~ 74 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGVSFQEIPIDGDA--AKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDA 74 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCCCcEEEECCCCH--HHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHHH
Confidence 46888876 999999999999999999988776432 235678899999999999999999999988877644
No 65
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.41 E-value=1.3e-06 Score=64.02 Aligned_cols=69 Identities=13% Similarity=0.095 Sum_probs=56.8
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
+++|..+ ||+|.+++.+|...|++|+.+.++-.. ....+.......+||++..+|..+.++..|.+||+
T Consensus 3 v~lys~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~---~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 3 VSLFTKPGCPFCARAKAALQENGISYEEIPLGKDI---TGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEEECCCCh---hHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 5788876 999999999999999999988775322 13345566677899999999999999999999984
No 66
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=98.41 E-value=6.9e-07 Score=71.22 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC--cchhhhhhhcccccccccccccccC
Q psy17288 213 NVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL--LSCHLQKKAHNQHFFVVNFGYFIRN 287 (322)
Q Consensus 213 ~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (322)
+.+..++...++.+.|+.||++|+++ ++|+.+| +||++++.+.++...++ ...+|.+.+|.+ +..+|
T Consensus 43 ~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~~- 114 (117)
T cd03182 43 VPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVVKLRVPEELTHLRAWYD-------RMAAR- 114 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhcCCCCccccHHHHHHHH-------HHHhc-
Confidence 45667888899999999999999865 7899988 99999999999888765 357888899999 55554
Q ss_pred ccc
Q psy17288 288 PSQ 290 (322)
Q Consensus 288 ~~~ 290 (322)
||+
T Consensus 115 p~~ 117 (117)
T cd03182 115 PSA 117 (117)
T ss_pred cCC
Confidence 774
No 67
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.30 E-value=2.9e-06 Score=61.32 Aligned_cols=70 Identities=24% Similarity=0.190 Sum_probs=55.7
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeee--cCHHHHHHHH
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKII--PDSKRIIQYV 109 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L--~ES~aI~~YL 109 (322)
++++|+.+ |++|++++.+|+++|++|..+.++ ......+++.+.++...||+|+.+|..+ .++.+|-++|
T Consensus 1 ~i~lf~~~~C~~C~~~~~~l~~~~i~~~~vdi~--~~~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 1 KVKVYTTPWCPPCKKAKEYLTSKGIAFEEIDVE--KDSAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred CEEEEcCCCChhHHHHHHHHHHCCCeEEEEecc--CCHHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 36888877 999999999999999999876554 2222345678889999999999888877 6777777765
No 68
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=98.27 E-value=3.3e-06 Score=67.89 Aligned_cols=68 Identities=16% Similarity=0.085 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHh--c--CCCCcch-hhhhHhhhhhhhcccCC-cchhhhhhhcccccccccccccccCcccccc
Q psy17288 220 ALERVDEVMNRIEAILIE--N--NKGNETS-IAIKLGGRAHYVRILPL-LSCHLQKKAHNQHFFVVNFGYFIRNPSQKIK 293 (322)
Q Consensus 220 ~~~~l~~~L~~lE~~L~~--~--l~Gd~~t-ADI~l~~~L~~l~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (322)
..+.+.+.|+.+|++|++ + ++|+.+| |||++++.+.++...++ .+.+|.+.+|.+ +... +|+++.+
T Consensus 45 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~-~p~~~~~ 116 (121)
T cd03191 45 YRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRFGVDLSPYPTIARINE-------ACLE-LPAFQAA 116 (121)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHhCCCcccCcHHHHHHH-------HHHh-ChhHHHh
Confidence 445688999999999983 2 7899988 99999999987766666 478888899999 5566 4999887
Q ss_pred cc
Q psy17288 294 LI 295 (322)
Q Consensus 294 ~~ 295 (322)
.+
T Consensus 117 ~~ 118 (121)
T cd03191 117 HP 118 (121)
T ss_pred Cc
Confidence 64
No 69
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.24 E-value=2e-06 Score=69.06 Aligned_cols=69 Identities=13% Similarity=0.068 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhccc---CC-cchhhhhhhcccccccccccccccCcc
Q psy17288 217 YEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRIL---PL-LSCHLQKKAHNQHFFVVNFGYFIRNPS 289 (322)
Q Consensus 217 ~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~---~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (322)
.+.+..++.+.|+.||++|+++ ++|+++| |||++++.+.++... ++ ...+|++.+|.+ +..+| ||
T Consensus 39 ~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~-------r~~~r-pa 110 (115)
T cd03196 39 EEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDPKWFDQSPYPRLRRWLN-------GFLAS-PL 110 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhhcccCcccCHHHHHHHH-------HHHcC-hH
Confidence 5567889999999999999975 7899988 999999887665432 22 367888899999 66674 99
Q ss_pred cccc
Q psy17288 290 QKIK 293 (322)
Q Consensus 290 ~~~~ 293 (322)
++.+
T Consensus 111 ~~~~ 114 (115)
T cd03196 111 FSKI 114 (115)
T ss_pred HHhh
Confidence 8653
No 70
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=98.22 E-value=4.8e-06 Score=65.42 Aligned_cols=70 Identities=16% Similarity=0.093 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC--cchhhhhhhcccccccccccccccCccc
Q psy17288 216 NYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL--LSCHLQKKAHNQHFFVVNFGYFIRNPSQ 290 (322)
Q Consensus 216 ~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (322)
..+...+.+.+.|+.||++|+++ ++|+.+| |||++++.+.++...|+ ...+|++++|.+ +..+| ||+
T Consensus 32 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~r-pa~ 103 (107)
T cd03186 32 EAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPALGIELPKQAKPLKDYME-------RVFAR-DSF 103 (107)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHcCCCCcccchHHHHHHH-------HHHCC-HHH
Confidence 34567888999999999999876 7899988 99999999877765664 346888899999 56665 998
Q ss_pred ccc
Q psy17288 291 KIK 293 (322)
Q Consensus 291 ~~~ 293 (322)
+.+
T Consensus 104 ~~~ 106 (107)
T cd03186 104 QKS 106 (107)
T ss_pred HHh
Confidence 754
No 71
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=98.22 E-value=3.2e-06 Score=66.74 Aligned_cols=71 Identities=18% Similarity=0.042 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC-cchhhhhhhcccccccccccccccCccc
Q psy17288 215 QNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL-LSCHLQKKAHNQHFFVVNFGYFIRNPSQ 290 (322)
Q Consensus 215 ~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (322)
+..+....++.+.|+.+|+.|+++ ++|+.+| |||++++.+.++...++ .+.+|...+|.+ +..+ +|++
T Consensus 39 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~-~p~~ 110 (114)
T cd03188 39 EVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGVGLDLSDWPNLAAYLA-------RVAA-RPAV 110 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhcCCChhhChHHHHHHH-------HHHh-CHHh
Confidence 345567788999999999999865 7899988 99999999988877665 356788889999 5566 4998
Q ss_pred ccc
Q psy17288 291 KIK 293 (322)
Q Consensus 291 ~~~ 293 (322)
+.+
T Consensus 111 k~~ 113 (114)
T cd03188 111 QAA 113 (114)
T ss_pred Hhh
Confidence 764
No 72
>KOG2903|consensus
Probab=98.22 E-value=5.3e-06 Score=74.42 Aligned_cols=177 Identities=16% Similarity=0.145 Sum_probs=107.3
Q ss_pred ceeEEee-cCCchHHHHHHHHHhcCCC----eEEEEeeCCC-C-----C----CC-----------------chhHHhhC
Q psy17288 37 CLWALRY-HDKQVMRKVIMTLHEKKLN----FKTHLVNLAS-N-----E----QY-----------------ESWFLEVN 84 (322)
Q Consensus 37 ~~~~Ly~-~~Sp~s~kVr~~L~ekgi~----y~~v~v~~~~-~-----e----~~-----------------~~~~l~~n 84 (322)
-.|-||- .+||++.|..+++..||++ +-.+.--... | + +. .+-|....
T Consensus 36 gryhLYvslaCPWAhRtLi~r~LKGL~~~i~~s~v~~~~d~~gW~F~~~~~~~nDs~~l~~~~d~~~g~k~l~elY~~~~ 115 (319)
T KOG2903|consen 36 GRYHLYVSLACPWAHRTLIVRALKGLEPAIGVSVVHWHLDDKGWRFLDEHIIINDSERLGVTPDPLNGAKRLRELYYIAS 115 (319)
T ss_pred ceEEEEEeccCcHHHHHHHHHHHcCccccceeEEeccccCCCcccCCCcccCCCchhcccCCCcccccchhHHHHHhhcC
Confidence 3477776 4599999999999999974 2222110000 0 0 00 00011111
Q ss_pred C----CCCccEEEeC---CeeecCHHHHHHHHH---HhcCC----CCCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcC
Q psy17288 85 P----LGEVPVLVDG---VKIIPDSKRIIQYVE---DNFSN----GYKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGA 150 (322)
Q Consensus 85 P----~gkVPvL~dd---g~~L~ES~aI~~YL~---~~~~~----~~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~ 150 (322)
| .-+||||-|- ..+=.||..|++.+. +.+.+ ..-.|+|. .-+++++.|.+|+-.
T Consensus 116 p~Y~grfTVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~--~L~~~Ide~N~wvy~---------- 183 (319)
T KOG2903|consen 116 PNYTGRFTVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPS--SLRAQIDETNSWVYD---------- 183 (319)
T ss_pred CCCCceEEEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCH--HHHHHHhhhhceecc----------
Confidence 2 2379999973 345669999999998 33321 01457875 456777777654421
Q ss_pred CCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHH
Q psy17288 151 PHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNR 230 (322)
Q Consensus 151 ~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 230 (322)
.+-. .-+ .+ ..+...+..+.....+-+.||.
T Consensus 184 ----~INN---GVY--k~----------------------------------------GFA~~~e~Ye~~V~~lfe~LDr 214 (319)
T KOG2903|consen 184 ----KINN---GVY--KC----------------------------------------GFAEKQEAYEEEVNQLFEALDR 214 (319)
T ss_pred ----cccC---cee--ee----------------------------------------ccccccchHHHHHHHHHHHHHH
Confidence 1100 000 00 0111344556677888899999
Q ss_pred HHHHHHhc----CCCCcch-hhhhHhhhhhhhccc----------CCcchhhhhhhccc
Q psy17288 231 IEAILIEN----NKGNETS-IAIKLGGRAHYVRIL----------PLLSCHLQKKAHNQ 274 (322)
Q Consensus 231 lE~~L~~~----l~Gd~~t-ADI~l~~~L~~l~~~----------~l~~~~~~~~~~~~ 274 (322)
+|..|.++ ++|+++| |||-|...+-+.+-. -+++.+|.+.-|..
T Consensus 215 ~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk 273 (319)
T KOG2903|consen 215 CEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLK 273 (319)
T ss_pred HHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHH
Confidence 99999986 6899999 999999988765432 23557777767766
No 73
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=98.20 E-value=3.3e-06 Score=66.77 Aligned_cols=73 Identities=12% Similarity=0.047 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC--cchhhhhhhcccccccccccccccC
Q psy17288 213 NVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL--LSCHLQKKAHNQHFFVVNFGYFIRN 287 (322)
Q Consensus 213 ~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (322)
++...++...++.+.|+.+|+.|+++ ++|+++| |||++++.+.++...+. ...+|...+|.+ +... +
T Consensus 34 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~-~ 105 (113)
T cd03178 34 IPYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIGIDDLDDFPNVKRWLD-------RIAA-R 105 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhccccchhhchHHHHHHH-------HHhh-C
Confidence 34456678888999999999999865 7899999 99999999988866654 456788889998 5566 4
Q ss_pred cccccc
Q psy17288 288 PSQKIK 293 (322)
Q Consensus 288 ~~~~~~ 293 (322)
||++++
T Consensus 106 p~~~~~ 111 (113)
T cd03178 106 PAVQRG 111 (113)
T ss_pred HHHHHh
Confidence 999775
No 74
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.20 E-value=3.8e-06 Score=60.59 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=49.4
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecC
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPD 101 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~E 101 (322)
+++|+.+ |++|.+++.+|.++|++|+.+.++. .....+++.+.||.++||+|+++|..+.+
T Consensus 2 v~l~~~~~c~~c~~~~~~l~~~~i~~~~~~i~~--~~~~~~~~~~~~~~~~vP~i~~~~~~i~g 63 (73)
T cd02976 2 VTVYTKPDCPYCKATKRFLDERGIPFEEVDVDE--DPEALEELKKLNGYRSVPVVVIGDEHLSG 63 (73)
T ss_pred EEEEeCCCChhHHHHHHHHHHCCCCeEEEeCCC--CHHHHHHHHHHcCCcccCEEEECCEEEec
Confidence 5788876 9999999999999999999876654 23335678889999999999988766653
No 75
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.17 E-value=5.7e-06 Score=64.86 Aligned_cols=70 Identities=19% Similarity=0.109 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccC-CcchhhhhhhcccccccccccccccCc
Q psy17288 213 NVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILP-LLSCHLQKKAHNQHFFVVNFGYFIRNP 288 (322)
Q Consensus 213 ~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (322)
+....++..+++.+.|+.+|++|+++ ++|+++| |||++++.+..+...+ ....+|.+++|.+ +..+| |
T Consensus 37 ~~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~~~~~~p~l~~~~~-------~~~~~-p 108 (110)
T cd03180 37 DPAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFELPIERPPLPHLERWYA-------RLRAR-P 108 (110)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHcccccccCchHHHHHH-------HHHhC-C
Confidence 45566778889999999999999865 7899988 9999998885433333 3567888899999 55664 7
Q ss_pred cc
Q psy17288 289 SQ 290 (322)
Q Consensus 289 ~~ 290 (322)
|+
T Consensus 109 ~~ 110 (110)
T cd03180 109 AF 110 (110)
T ss_pred CC
Confidence 74
No 76
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.16 E-value=9.1e-06 Score=58.26 Aligned_cols=68 Identities=9% Similarity=0.046 Sum_probs=55.8
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQY 108 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~Y 108 (322)
+++|..+ ||+|++++.+|..+|++|+.+.++ ..+....++.++++..++|++..+|..+.++..|.+.
T Consensus 2 v~ly~~~~Cp~C~~~~~~L~~~~i~~~~~di~--~~~~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 2 VVVFSKSTCPYCKRAKRLLESLGIEFEEIDIL--EDGELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCcEEEEECC--CCHHHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 4678866 999999999999999999876553 3333456777889999999999999999999888653
No 77
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.16 E-value=9e-06 Score=59.67 Aligned_cols=66 Identities=14% Similarity=0.064 Sum_probs=53.8
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRII 106 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~ 106 (322)
++||+.+ ||+|++++.+|+++|++|+.+.++- .....+++.++++..+||++..+|..+..-.+..
T Consensus 3 v~ly~~~~C~~C~ka~~~L~~~gi~~~~~di~~--~~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~~ 69 (73)
T cd03027 3 VTIYSRLGCEDCTAVRLFLREKGLPYVEINIDI--FPERKAELEERTGSSVVPQIFFNEKLVGGLTDLK 69 (73)
T ss_pred EEEEecCCChhHHHHHHHHHHCCCceEEEECCC--CHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHH
Confidence 5788877 9999999999999999999886643 2334567889999999999998888887665544
No 78
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.15 E-value=3.2e-05 Score=70.15 Aligned_cols=189 Identities=18% Similarity=0.195 Sum_probs=117.5
Q ss_pred ceeEEeecC-CchHHHHHHHHHhcCCC-eEE-EEeeCCCCC---C------------------CchhHHhhCCC----CC
Q psy17288 37 CLWALRYHD-KQVMRKVIMTLHEKKLN-FKT-HLVNLASNE---Q------------------YESWFLEVNPL----GE 88 (322)
Q Consensus 37 ~~~~Ly~~~-Sp~s~kVr~~L~ekgi~-y~~-v~v~~~~~e---~------------------~~~~~l~~nP~----gk 88 (322)
-.|.||-.- ||++.|..++=+.||++ +-. ..|.....+ . ..+-|....|. -+
T Consensus 50 GRYhLYvslaCPWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvT 129 (324)
T COG0435 50 GRYHLYVSLACPWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVT 129 (324)
T ss_pred CeEEEEEEecCchHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCcee
Confidence 358888754 99999999999999985 222 222221100 0 01122333332 37
Q ss_pred ccEEEeC--Cee-ecCHHHHHHHHHHhcC---CCCCCCCCCCHHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCC
Q psy17288 89 VPVLVDG--VKI-IPDSKRIIQYVEDNFS---NGYKRLLPTDMDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKS 162 (322)
Q Consensus 89 VPvL~dd--g~~-L~ES~aI~~YL~~~~~---~~~~~L~P~~~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~ 162 (322)
||||.|. .++ =.||..|++-+...+. .....|+|. .-|.+++.|.+++-.-.. .| .
T Consensus 130 VPVLwDk~~~tIVnNES~eIirm~N~aFde~~~~~~dlyP~--~Lr~eId~~n~~Iy~~vN----NG------V------ 191 (324)
T COG0435 130 VPVLWDKKTQTIVNNESAEIIRMFNSAFDEFGASAVDLYPE--ALRTEIDELNKWIYDTVN----NG------V------ 191 (324)
T ss_pred EEEEEecCCCeeecCCcHHHHHHHHHHHHHHhhhccccCCH--HHHHHHHHHHhhhccccc----Cc------e------
Confidence 9999973 344 4599999999976552 112578886 456777777654321100 00 0
Q ss_pred CCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CC
Q psy17288 163 PFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NK 240 (322)
Q Consensus 163 ~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~ 240 (322)
| -. ..+.+.+.-+++..++=..|+.||..|+++ ++
T Consensus 192 -Y----------------------k~--------------------GFA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~ 228 (324)
T COG0435 192 -Y----------------------KA--------------------GFATTQEAYEEAVKKLFEALDKLEQILSERRYLT 228 (324)
T ss_pred -e----------------------ee--------------------cccchHHHHHHHHHHHHHHHHHHHHHhhcCeeec
Confidence 0 00 111234455667788889999999999988 89
Q ss_pred CCcch-hhhhHhhhhhhhccc-------CC--cchhhhhhhcccccccccccccccCccccccc
Q psy17288 241 GNETS-IAIKLGGRAHYVRIL-------PL--LSCHLQKKAHNQHFFVVNFGYFIRNPSQKIKL 294 (322)
Q Consensus 241 Gd~~t-ADI~l~~~L~~l~~~-------~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (322)
||+.| |||-|...|.+.+-. .+ -..+|.+..|+. +... .|.+.+|.
T Consensus 229 Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr-------~LYq-~pg~~~T~ 284 (324)
T COG0435 229 GDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLR-------DLYQ-LPGFAETV 284 (324)
T ss_pred cccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHH-------HHhc-Cccccccc
Confidence 99988 999999999876543 12 224777777776 4444 36666554
No 79
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=98.15 E-value=8.6e-06 Score=65.07 Aligned_cols=60 Identities=12% Similarity=-0.050 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccC-Ccchhhhhhhccc
Q psy17288 215 QNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILP-LLSCHLQKKAHNQ 274 (322)
Q Consensus 215 ~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~-l~~~~~~~~~~~~ 274 (322)
...+.+..++.+.|+.||++|+++ ++|+.+| |||++++.+.++...+ ....+|++.+|.+
T Consensus 50 ~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~~~~~p~l~~w~~ 113 (119)
T cd03189 50 VLAGFINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALARGPLLEKYPNIAAYLE 113 (119)
T ss_pred HHHHHHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCchHHHHHH
Confidence 344567788999999999999876 8899988 9999999998887666 3567888888888
No 80
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=98.14 E-value=4.6e-06 Score=66.36 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccC---Ccchhhhhhhccccccccccccccc
Q psy17288 213 NVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILP---LLSCHLQKKAHNQHFFVVNFGYFIR 286 (322)
Q Consensus 213 ~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~ 286 (322)
+.+..++....+.+.|+.||++|+++ ++|+++| |||++++.+.++...+ ..+.+|.+.+|.+ +..+
T Consensus 39 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~p~l~~~~~-------~~~~- 110 (118)
T cd03187 39 DEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATPFAKLFDSRPHVKAWWE-------DISA- 110 (118)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHccchhhhhcCchHHHHHH-------HHHh-
Confidence 55666778889999999999999865 7899998 9999999988876432 2446787888888 5566
Q ss_pred Ccccccc
Q psy17288 287 NPSQKIK 293 (322)
Q Consensus 287 ~~~~~~~ 293 (322)
+||++.+
T Consensus 111 ~p~~~~~ 117 (118)
T cd03187 111 RPAWKKV 117 (118)
T ss_pred CHHHHhh
Confidence 4998765
No 81
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=98.13 E-value=8.9e-06 Score=67.75 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhccc-------C--Ccchhhhhhhccccccccc
Q psy17288 213 NVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRIL-------P--LLSCHLQKKAHNQHFFVVN 280 (322)
Q Consensus 213 ~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~-------~--l~~~~~~~~~~~~~~~~~~ 280 (322)
+++..+.....+.+.|+.+|++|+++ ++|+.+| |||++++.+.++... + ....+|.+.+|.+
T Consensus 31 ~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~------ 104 (142)
T cd03190 31 TQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLR------ 104 (142)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHH------
Confidence 45566778889999999999999866 7899988 999999998766321 1 1346788889998
Q ss_pred ccccccCccccccccc
Q psy17288 281 FGYFIRNPSQKIKLIP 296 (322)
Q Consensus 281 ~~~~~~~~~~~~~~~~ 296 (322)
+... +||++++..+
T Consensus 105 -r~~~-~P~~k~~~~~ 118 (142)
T cd03190 105 -RLYQ-NPGVAETTNF 118 (142)
T ss_pred -HHhc-CchHhhhcCH
Confidence 5566 5999998876
No 82
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=98.05 E-value=7.9e-06 Score=67.51 Aligned_cols=75 Identities=12% Similarity=0.061 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh----------------c--CCCCcch-hhhhHhhhhhhhccc-----CC--cchh
Q psy17288 213 NVQNYEQALERVDEVMNRIEAILIE----------------N--NKGNETS-IAIKLGGRAHYVRIL-----PL--LSCH 266 (322)
Q Consensus 213 ~~~~~~~~~~~l~~~L~~lE~~L~~----------------~--l~Gd~~t-ADI~l~~~L~~l~~~-----~l--~~~~ 266 (322)
+++..+.....+...|+.||..|++ + ++|+++| |||.+++.|.++... |+ ...+
T Consensus 23 ~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~ 102 (134)
T cd03198 23 NPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADL 102 (134)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccC
Confidence 4566777888999999999999986 3 7899998 999999999877532 43 3678
Q ss_pred hhhhhcccccccccccccccCcccccccc
Q psy17288 267 LQKKAHNQHFFVVNFGYFIRNPSQKIKLI 295 (322)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (322)
|++.+|.+ +..+| ||++.+.+
T Consensus 103 P~L~aw~~-------ri~aR-Psfk~t~~ 123 (134)
T cd03198 103 TGLWRYLK-------NAYQR-EEFTNTCP 123 (134)
T ss_pred HHHHHHHH-------HHHCC-HHHHHHcC
Confidence 99999999 65665 99998875
No 83
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=98.04 E-value=2e-05 Score=57.81 Aligned_cols=70 Identities=10% Similarity=0.082 Sum_probs=52.1
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhC-CCCCccEEE-eCCeeecCH--HHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVN-PLGEVPVLV-DGVKIIPDS--KRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~n-P~gkVPvL~-ddg~~L~ES--~aI~~YL~ 110 (322)
+++|+.+ |+.|++++.+|.+.|++|+.+.++ ..+.....+.++| +...||+++ ++|..+.++ ..|+.+|.
T Consensus 2 v~ly~~~~C~~C~~~~~~L~~~~~~~~~idi~--~~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~~~~~~~~l~ 76 (77)
T TIGR02200 2 ITVYGTTWCGYCAQLMRTLDKLGAAYEWVDIE--EDEGAADRVVSVNNGNMTVPTVKFADGSFLTNPSAAQVKAKLQ 76 (77)
T ss_pred EEEEECCCChhHHHHHHHHHHcCCceEEEeCc--CCHhHHHHHHHHhCCCceeCEEEECCCeEecCCCHHHHHHHhh
Confidence 4688866 999999999999999999876554 3333345666777 899999997 677776644 45555553
No 84
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.02 E-value=3.6e-06 Score=65.68 Aligned_cols=70 Identities=16% Similarity=0.108 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCCcchhhhhhhcccccccccccccccCcccccc
Q psy17288 217 YEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPLLSCHLQKKAHNQHFFVVNFGYFIRNPSQKIK 293 (322)
Q Consensus 217 ~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (322)
.+....++.+.++.||++|+++ ++|+.+| |||++++.+.++...+..+.+|.+.+|.+ +...| ||++++
T Consensus 28 ~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~~-p~~~~~ 99 (103)
T cd03207 28 RMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFGLLPERPAFDAYIA-------RITDR-PAFQRA 99 (103)
T ss_pred hhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcCCCCCChHHHHHHH-------HHHcC-HHHHHH
Confidence 4556788999999999999976 7899988 99999999999877676677888889999 55665 999876
Q ss_pred c
Q psy17288 294 L 294 (322)
Q Consensus 294 ~ 294 (322)
.
T Consensus 100 ~ 100 (103)
T cd03207 100 A 100 (103)
T ss_pred h
Confidence 5
No 85
>PRK10329 glutaredoxin-like protein; Provisional
Probab=97.98 E-value=2.2e-05 Score=59.12 Aligned_cols=58 Identities=10% Similarity=0.115 Sum_probs=44.1
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCee
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKI 98 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~ 98 (322)
.+++|..+ ||+|.+++-+|.++||+|+.+.++-.. ...+.+..++..+||+++.+|..
T Consensus 2 ~v~lYt~~~Cp~C~~ak~~L~~~gI~~~~idi~~~~---~~~~~~~~~g~~~vPvv~i~~~~ 60 (81)
T PRK10329 2 RITIYTRNDCVQCHATKRAMESRGFDFEMINVDRVP---EAAETLRAQGFRQLPVVIAGDLS 60 (81)
T ss_pred EEEEEeCCCCHhHHHHHHHHHHCCCceEEEECCCCH---HHHHHHHHcCCCCcCEEEECCEE
Confidence 46888876 999999999999999999988775321 12233445688899999976643
No 86
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=97.97 E-value=8.3e-06 Score=58.88 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC----cchhhhhhhccc
Q psy17288 215 QNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL----LSCHLQKKAHNQ 274 (322)
Q Consensus 215 ~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l----~~~~~~~~~~~~ 274 (322)
.+++++.+++.+.|+.||++|+++ +.|+++| +||++++.+.++...+. ...++++.+|.+
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~ 68 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYE 68 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHh
Confidence 456788999999999999999987 7899988 99999999999988863 456666667765
No 87
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=97.97 E-value=2.5e-05 Score=62.96 Aligned_cols=71 Identities=20% Similarity=0.129 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhccc----CC----cchhhhhhhcccccccccccccc
Q psy17288 217 YEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRIL----PL----LSCHLQKKAHNQHFFVVNFGYFI 285 (322)
Q Consensus 217 ~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~----~l----~~~~~~~~~~~~~~~~~~~~~~~ 285 (322)
.+.....+.+.|+.||+.|+++ ++|+++| |||++++.+.++..+ +. ...+|+..+|++ +..+
T Consensus 33 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~ 105 (126)
T cd03185 33 REKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAE-------RFLE 105 (126)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHH-------HHHh
Confidence 3456778899999999999866 7899998 999999999887542 22 356788889998 5566
Q ss_pred cCcccccccc
Q psy17288 286 RNPSQKIKLI 295 (322)
Q Consensus 286 ~~~~~~~~~~ 295 (322)
+||++.+.+
T Consensus 106 -~p~~~~~~~ 114 (126)
T cd03185 106 -LEAVKEVLP 114 (126)
T ss_pred -ccHHHHhCC
Confidence 499987754
No 88
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.93 E-value=2.3e-05 Score=60.94 Aligned_cols=63 Identities=17% Similarity=0.090 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC-cchhhhhhhcccc
Q psy17288 213 NVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL-LSCHLQKKAHNQH 275 (322)
Q Consensus 213 ~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l-~~~~~~~~~~~~~ 275 (322)
+++..++...++.+.|+.||..|+++ ++|+.+| |||++++.+.++...++ ...+|.+.+|.++
T Consensus 37 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~~~~~~~~p~l~~~~~~ 103 (105)
T cd03179 37 DAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEGGFDLADYPAIRAWLAR 103 (105)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccccCCChHhCccHHHHHHh
Confidence 45566778899999999999999765 7899999 99999999999887765 3456666777663
No 89
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=97.87 E-value=5.7e-05 Score=55.31 Aligned_cols=70 Identities=10% Similarity=0.026 Sum_probs=54.1
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCC-CccEEEeCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLG-EVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~g-kVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
+++|..+ ||+|.+++-+|+++|++|+.+.++.. .....++.+..... .||++..+|..+.+...+.++-.
T Consensus 2 i~ly~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~--~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~~ 73 (75)
T cd03418 2 VEIYTKPNCPYCVRAKALLDKKGVDYEEIDVDGD--PALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALER 73 (75)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCcEEEEECCCC--HHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHHh
Confidence 4678876 99999999999999999998877532 11234455555554 89999999999999998887643
No 90
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=97.86 E-value=2.5e-05 Score=63.34 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHh-c--CCCCcch-hhhhHhhhhhhhccc-----CC--cchhhhhhhccccccccccccccc
Q psy17288 218 EQALERVDEVMNRIEAILIE-N--NKGNETS-IAIKLGGRAHYVRIL-----PL--LSCHLQKKAHNQHFFVVNFGYFIR 286 (322)
Q Consensus 218 ~~~~~~l~~~L~~lE~~L~~-~--l~Gd~~t-ADI~l~~~L~~l~~~-----~l--~~~~~~~~~~~~~~~~~~~~~~~~ 286 (322)
++..+++.+.|+.||..|.+ + ++|+.+| |||++++.+.++... ++ .+.+|++.+|.+ +...|
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~-------rl~~r 101 (121)
T cd03201 29 DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMK-------ALFSR 101 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHH-------HHHCC
Confidence 45667899999999999984 3 7899999 999999988777543 33 368888899999 66675
Q ss_pred Cccccccccc
Q psy17288 287 NPSQKIKLIP 296 (322)
Q Consensus 287 ~~~~~~~~~~ 296 (322)
||++.+.++
T Consensus 102 -ps~~~t~~~ 110 (121)
T cd03201 102 -ESFVKTKAE 110 (121)
T ss_pred -chhhhcCCC
Confidence 999988753
No 91
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=97.84 E-value=3.4e-05 Score=59.94 Aligned_cols=52 Identities=10% Similarity=-0.004 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCCcchhhhhhhcccc
Q psy17288 222 ERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPLLSCHLQKKAHNQH 275 (322)
Q Consensus 222 ~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~~~~~~~~~~ 275 (322)
.++.+.++.+|++|+++ ++|+++| |||++++.+.+... ..+.+|++.+|.++
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~~~--~~~~~p~l~~w~~r 92 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQTGL--ASAAPANVQRWLKS 92 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHccc--ccccChHHHHHHHH
Confidence 34456778899999876 7899988 99999999876422 13567888888874
No 92
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=97.83 E-value=7.3e-05 Score=56.16 Aligned_cols=70 Identities=11% Similarity=0.066 Sum_probs=52.7
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHH-hhCCCCCccEEEeCCeeecCHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFL-EVNPLGEVPVLVDGVKIIPDSKRIIQYV 109 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l-~~nP~gkVPvL~ddg~~L~ES~aI~~YL 109 (322)
.++|..+ ||+|.++.-+|..+|++|+.+.++...++. ..+++ ..++..+||++..+|..+.....+.++.
T Consensus 3 v~iyt~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~~~-~~~~~~~~~g~~tvP~I~i~~~~igg~~d~~~~~ 74 (80)
T COG0695 3 VTIYTKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEPEE-AREMVKRGKGQRTVPQIFIGGKHVGGCDDLDALE 74 (80)
T ss_pred EEEEECCCCchHHHHHHHHHHcCCCcEEEEecCCcHHH-HHHHHHHhCCCCCcCEEEECCEEEeCcccHHHHH
Confidence 5678777 999999999999999999998887654322 33444 4558899999998887776554444443
No 93
>KOG3027|consensus
Probab=97.79 E-value=0.00072 Score=59.01 Aligned_cols=185 Identities=17% Similarity=0.136 Sum_probs=117.9
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHHhcCCCCCCCCC-CC
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNFSNGYKRLLP-TD 124 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~~~~~~~~~L~P-~~ 124 (322)
..-|..|..+|...++||..+.-+ ..+| ++|.|+||.|..+.+.++|=..|..++..+.-. |-. -+
T Consensus 34 ~ascLAVqtfLrMcnLPf~v~~~~-------Naef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~~~----l~s~ls 100 (257)
T KOG3027|consen 34 NASCLAVQTFLRMCNLPFNVRQRA-------NAEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGVT----LTSWLS 100 (257)
T ss_pred chhHHHHHHHHHHcCCCceeeecC-------Cccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhccc----hhhhhh
Confidence 567889999999999999876432 1223 568999999999999999999999999988532 222 23
Q ss_pred HHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCC-----CCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCChhHHHHH
Q psy17288 125 MDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLL-----NPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPSISDILLD 199 (322)
Q Consensus 125 ~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~-----~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~~~~~y~~ 199 (322)
..+++.++..+++++.+.--+=.+-++.+..-.. ..-++|-=+.. -+ ..|..
T Consensus 101 E~qkadmra~vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs------------~i-----------~~f~K 157 (257)
T KOG3027|consen 101 EDQKADMRAYVSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLS------------HI-----------LPFVK 157 (257)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHH------------HH-----------HHHHH
Confidence 4567888888877776533221111111111100 00011100110 00 11211
Q ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCCcchh
Q psy17288 200 KATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPLLSCH 266 (322)
Q Consensus 200 k~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~ 266 (322)
+.+.........++....++..+++..+.+.|+++|+.. ..|++.+ +|..+.+.+..+-.-.|..+.
T Consensus 158 rr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~e 227 (257)
T KOG3027|consen 158 RRKALRELKVYDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNME 227 (257)
T ss_pred HHHHHHHHhhcCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHH
Confidence 122222233344577788999999999999999999976 6788877 999999999887665554443
No 94
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=97.77 E-value=7.3e-05 Score=59.95 Aligned_cols=74 Identities=18% Similarity=0.104 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC----cchhhhhhhccccccccccccccc
Q psy17288 214 VQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL----LSCHLQKKAHNQHFFVVNFGYFIR 286 (322)
Q Consensus 214 ~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~ 286 (322)
....+.....+.+.|+.||+.|+.+ ++|+.+| |||++++.+.++...++ ...++...+|.+ +...
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~- 106 (123)
T cd03181 35 KKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVFDKEWRAKYPNVTRWFN-------TVVN- 106 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHcCHHHHHhChHHHHHHH-------HHHc-
Confidence 3455667888999999999999876 7899988 99999999988744433 245677778888 5455
Q ss_pred Ccccccccc
Q psy17288 287 NPSQKIKLI 295 (322)
Q Consensus 287 ~~~~~~~~~ 295 (322)
+||++++..
T Consensus 107 ~p~~~~~~~ 115 (123)
T cd03181 107 QPIFKAVFG 115 (123)
T ss_pred CHHHHHHcC
Confidence 599987765
No 95
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=97.76 E-value=2.8e-05 Score=62.89 Aligned_cols=74 Identities=14% Similarity=0.089 Sum_probs=59.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHH-Hhc--CCCCcch-hhhhHhhhhhhhcccCC--cchhhhhhhccccccccccccccc
Q psy17288 213 NVQNYEQALERVDEVMNRIEAIL-IEN--NKGNETS-IAIKLGGRAHYVRILPL--LSCHLQKKAHNQHFFVVNFGYFIR 286 (322)
Q Consensus 213 ~~~~~~~~~~~l~~~L~~lE~~L-~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~ 286 (322)
+++..++..+.+.+.++.+|++| +++ ++|+.+| |||++++.+.++...++ ...+|.+.+|.+ +..++
T Consensus 39 ~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~~ 111 (126)
T cd03183 39 SPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAGYDVFEGRPKLAAWRK-------RVKEA 111 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcCCcccccCchHHHHHH-------HHHHh
Confidence 56667788899999999999985 433 7899988 99999998888776664 577899999999 66775
Q ss_pred -Ccccccc
Q psy17288 287 -NPSQKIK 293 (322)
Q Consensus 287 -~~~~~~~ 293 (322)
|||++..
T Consensus 112 ~~p~~~~~ 119 (126)
T cd03183 112 GNPLFDEA 119 (126)
T ss_pred cchhHHHH
Confidence 6998653
No 96
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=97.70 E-value=0.00016 Score=53.72 Aligned_cols=70 Identities=10% Similarity=0.066 Sum_probs=56.5
Q ss_pred EEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHH
Q psy17288 40 ALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVED 111 (322)
Q Consensus 40 ~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~ 111 (322)
++|..+ ||+|.+++-+|+++|++|+.+.++.. +....++.+..+...||++..+|..+.+...+..+-++
T Consensus 2 ~ly~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~--~~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~~ 72 (79)
T TIGR02181 2 TIYTKPYCPYCTRAKALLSSKGVTFTEIRVDGD--PALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDRE 72 (79)
T ss_pred EEEecCCChhHHHHHHHHHHcCCCcEEEEecCC--HHHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHHc
Confidence 677766 99999999999999999999877642 12245666777788999999999999998888776654
No 97
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=97.66 E-value=5.7e-05 Score=57.67 Aligned_cols=61 Identities=18% Similarity=0.116 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC--c-chhhhhhhccc
Q psy17288 214 VQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL--L-SCHLQKKAHNQ 274 (322)
Q Consensus 214 ~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l--~-~~~~~~~~~~~ 274 (322)
++..+....++.+.|+.+|+.|+++ ++|+.+| |||++++.+.++...+. . +.+|++.+|.+
T Consensus 23 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~~~~~P~l~~w~~ 89 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFLFEKFPKLKKWYE 89 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTTHTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcccccCHHHHHHHH
Confidence 4456778889999999999999976 7999988 99999999999888754 3 68999999998
No 98
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=97.65 E-value=3e-05 Score=64.25 Aligned_cols=90 Identities=26% Similarity=0.173 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHH--hc--CCCCcch-hhhhHhhhhhhhccc--CCcchhhhhhhcccccccccccccccCcccccc
Q psy17288 221 LERVDEVMNRIEAILI--EN--NKGNETS-IAIKLGGRAHYVRIL--PLLSCHLQKKAHNQHFFVVNFGYFIRNPSQKIK 293 (322)
Q Consensus 221 ~~~l~~~L~~lE~~L~--~~--l~Gd~~t-ADI~l~~~L~~l~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (322)
...+.+.|+.||+.|+ ++ ++|+.+| |||.+++.+.++... .....+|.+.+|.+ +... +|++++.
T Consensus 41 ~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~~~l~~~P~l~~~~~-------rv~~-~P~vk~~ 112 (137)
T cd03208 41 EKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDPSLLSDFPLLQAFKT-------RISN-LPTIKKF 112 (137)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhchhhhccChHHHHHHH-------HHHc-CHHHHHH
Confidence 3456899999999998 43 7899988 999999999988654 33567888899998 5566 4999888
Q ss_pred cccCCCCCCccCCCcccccccccccc
Q psy17288 294 LIPYGQGKPRPLTNGVCLKACDVFHW 319 (322)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (322)
.....+-.+.|..||+- ..-.||.|
T Consensus 113 ~~~~~~~~~~~~~~~~~-~~~~~~~~ 137 (137)
T cd03208 113 LQPGSPRKPPPDEKYVE-TVRKVFKF 137 (137)
T ss_pred HhcCCCCCCCccHHHHH-HHHHHhcC
Confidence 76544434444445543 23344444
No 99
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=97.63 E-value=0.00012 Score=53.47 Aligned_cols=55 Identities=13% Similarity=0.150 Sum_probs=41.2
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCC
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGV 96 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg 96 (322)
+++|..+ ||+|++++-+|+++|++|+.+.++-.. ...+.+...+...||+++.+|
T Consensus 1 v~ly~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~---~~~~~~~~~g~~~vP~v~~~g 56 (72)
T TIGR02194 1 ITVYSKNNCVQCKMTKKALEEHGIAFEEINIDEQP---EAIDYVKAQGFRQVPVIVADG 56 (72)
T ss_pred CEEEeCCCCHHHHHHHHHHHHCCCceEEEECCCCH---HHHHHHHHcCCcccCEEEECC
Confidence 3678776 999999999999999999988775321 122334445777999999755
No 100
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=97.62 E-value=0.00033 Score=52.02 Aligned_cols=73 Identities=11% Similarity=0.117 Sum_probs=58.6
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCC-CCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASN-EQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVED 111 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~-e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~ 111 (322)
+++|+.+ ||+|.+++-+|.+.+++|+.+.++.... +.....+.+......+|++..+|..+.++..|..+..+
T Consensus 2 v~~y~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 2 VVVFSKSYCPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 4677766 9999999999999999999988876542 11223455677778999999999999999999988764
No 101
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=97.58 E-value=4.5e-05 Score=61.75 Aligned_cols=72 Identities=11% Similarity=0.091 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh--c--CCCCcch-hhhhHhhhhhhhcccC-------Ccchhhhhhhcccccccccccc
Q psy17288 216 NYEQALERVDEVMNRIEAILIE--N--NKGNETS-IAIKLGGRAHYVRILP-------LLSCHLQKKAHNQHFFVVNFGY 283 (322)
Q Consensus 216 ~~~~~~~~l~~~L~~lE~~L~~--~--l~Gd~~t-ADI~l~~~L~~l~~~~-------l~~~~~~~~~~~~~~~~~~~~~ 283 (322)
..++..+.+.+.|+.+|+.|++ + ++|+.+| |||++++.+.++...+ ..+.+|++.+|.+ +.
T Consensus 29 ~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~-------r~ 101 (124)
T cd03184 29 DREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFPLDRFPKLKKWMD-------AM 101 (124)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCCcccChHHHHHHH-------Hh
Confidence 4456778899999999999985 3 7899988 9999999988776443 2467888899999 55
Q ss_pred cccCcccccccc
Q psy17288 284 FIRNPSQKIKLI 295 (322)
Q Consensus 284 ~~~~~~~~~~~~ 295 (322)
.. +||++.+.+
T Consensus 102 ~~-~p~v~~~~~ 112 (124)
T cd03184 102 KE-DPAVQAFYT 112 (124)
T ss_pred cc-ChHHHHHhC
Confidence 66 499988775
No 102
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=97.57 E-value=6.2e-05 Score=60.20 Aligned_cols=70 Identities=20% Similarity=0.247 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcc-cCC-cchhhhhhhcccccccccccccccCcccc
Q psy17288 217 YEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRI-LPL-LSCHLQKKAHNQHFFVVNFGYFIRNPSQK 291 (322)
Q Consensus 217 ~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~-~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (322)
.+++..++.+.|+.||+.|+++ ++|+++| |||++++.+.++.. .++ ...+|.+.+|.+ +...| |+++
T Consensus 36 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~p~l~~w~~-------~~~~~-p~~~ 107 (118)
T cd03177 36 PEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEALLPLDLSKYPNVRAWLE-------RLKAL-PPYE 107 (118)
T ss_pred CHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHhcCCChhhCchHHHHHH-------HHHcc-cchH
Confidence 3456778999999999999765 7899988 99999999988876 454 356788889999 66665 9998
Q ss_pred ccc
Q psy17288 292 IKL 294 (322)
Q Consensus 292 ~~~ 294 (322)
+..
T Consensus 108 ~~~ 110 (118)
T cd03177 108 EAN 110 (118)
T ss_pred HHH
Confidence 754
No 103
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=97.55 E-value=0.00054 Score=52.02 Aligned_cols=74 Identities=11% Similarity=0.034 Sum_probs=55.0
Q ss_pred eEEeecC-CchHHHHHHHHHhcC-----CCeEEEEeeCCCCCCCchhHHhhCCC--CCccEEEeCCeeecCHHHHHHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKK-----LNFKTHLVNLASNEQYESWFLEVNPL--GEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekg-----i~y~~v~v~~~~~e~~~~~~l~~nP~--gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
+++|+.+ ||+|.+++-+|..++ ++|+.+.++-. + ....++.+.... ..||++..+|..+.++..|..|+.
T Consensus 2 V~vys~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~-~-~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~ 79 (86)
T TIGR02183 2 VVIFGRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAE-G-ISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVK 79 (86)
T ss_pred EEEEeCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCC-H-HHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHH
Confidence 4678776 999999999999985 55666655421 1 112345555443 589999999999999999999998
Q ss_pred HhcC
Q psy17288 111 DNFS 114 (322)
Q Consensus 111 ~~~~ 114 (322)
+.++
T Consensus 80 ~~~~ 83 (86)
T TIGR02183 80 ENFD 83 (86)
T ss_pred hccc
Confidence 8764
No 104
>KOG3028|consensus
Probab=97.47 E-value=0.0045 Score=57.37 Aligned_cols=206 Identities=14% Similarity=0.082 Sum_probs=122.3
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE-eCCeeecCHHHHHHHHHHhcCCCCCCCCCCC
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVEDNFSNGYKRLLPTD 124 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~-ddg~~L~ES~aI~~YL~~~~~~~~~~L~P~~ 124 (322)
++-|..+.++++..+-+.+.+..+. + -..|.|++|+|+ ++|..++.=..|..||.....+ -.+-+..
T Consensus 17 d~~sL~~l~y~kl~~~~l~v~~ssN-------~---~~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~k--y~~d~dl 84 (313)
T KOG3028|consen 17 DPDSLAALIYLKLAGAPLKVVVSSN-------P---WRSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKK--YNLDADL 84 (313)
T ss_pred ChhHHHHHHHHHHhCCCceeEeecC-------C---CCCCCCCCCeEEecCCceeccHHHHHHHHHHhccc--CCcCccH
Confidence 7889999999999996655443321 1 134789999999 5679999999999999985322 1222222
Q ss_pred -HHHHHHHHHHHHHhcccchhhhhhcCCCCCCCCCCCCCCCchhhHHhhhhcCCCcHHHHHHhhhcCCC-hh--HHHHHH
Q psy17288 125 -MDSKMDVIALRDEIDSLPVGLITKGAPHHPDFLLNPKSPFLPSNRAFMMDNQSRKPQVIRKAADVNPS-IS--DILLDK 200 (322)
Q Consensus 125 -~~~ra~v~~~~~~~d~l~~~~~~~~~~~~p~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~p~-~~--~~y~~k 200 (322)
..+.+....|+.+++.....+..+.-++.+.-+ ....|.+.....+ .|- +. ..+++.
T Consensus 85 ~~kq~a~~~a~~sll~~~l~~a~~~t~~v~~~Ny-------~e~Tkk~yak~l~------------fP~n~~~p~~l~~q 145 (313)
T KOG3028|consen 85 SAKQLADTLAFMSLLEENLEPALLYTFWVDTENY-------NEVTKKWYAKALP------------FPLNYILPGKLQRQ 145 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccch-------hhHhHHHHHhcCC------------CchhhcchhhhHHH
Confidence 355688899998888776655544433333221 1111221111000 000 00 011111
Q ss_pred HHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCCcchhhhhhhcccccc
Q psy17288 201 ATRQEQFNKELNNVQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPLLSCHLQKKAHNQHFF 277 (322)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~~~~~~~~~~~~ 277 (322)
...+. ......+.+..++......+++..+.+.|+.+ ..||..+ .|..+.+.+..+-...+.....+ .-|..|-|
T Consensus 146 Ak~rl-~l~~g~~~~~e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq-~~l~~~~N 223 (313)
T KOG3028|consen 146 AKERL-QLTLGELTEREDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQ-VHLLAHKN 223 (313)
T ss_pred HHHHH-HHHhCCchhhHHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHH-HHHHhcch
Confidence 11111 11111233445667788889999999999977 5788765 99999999988666666444433 34445677
Q ss_pred ccccccccc
Q psy17288 278 VVNFGYFIR 286 (322)
Q Consensus 278 ~~~~~~~~~ 286 (322)
+| +|+.|
T Consensus 224 L~--~~~~~ 230 (313)
T KOG3028|consen 224 LV--RYVER 230 (313)
T ss_pred HH--HHHHH
Confidence 77 55554
No 105
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=97.46 E-value=0.00067 Score=51.19 Aligned_cols=75 Identities=9% Similarity=0.053 Sum_probs=57.5
Q ss_pred eeEEeecC-CchHHHHHHHHHh-----cCCCeEEEEeeCCCCCCCchhHHhhCCC--CCccEEEeCCeeecCHHHHHHHH
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHE-----KKLNFKTHLVNLASNEQYESWFLEVNPL--GEVPVLVDGVKIIPDSKRIIQYV 109 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~e-----kgi~y~~v~v~~~~~e~~~~~~l~~nP~--gkVPvL~ddg~~L~ES~aI~~YL 109 (322)
.+++|..+ ||+|.+++-+|.+ .|++|+.+.++-... ...++...... ..||++..||..+.....|..++
T Consensus 2 ~v~iy~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~--~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~~ 79 (85)
T PRK11200 2 FVVIFGRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGI--SKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAYV 79 (85)
T ss_pred EEEEEeCCCChhHHHHHHHHHhhcccccCCcEEEEECCCChH--HHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHHH
Confidence 35788876 9999999999999 899999887753211 12234443333 58999999999999999999999
Q ss_pred HHhcC
Q psy17288 110 EDNFS 114 (322)
Q Consensus 110 ~~~~~ 114 (322)
.+.++
T Consensus 80 ~~~~~ 84 (85)
T PRK11200 80 KENLG 84 (85)
T ss_pred HHhcc
Confidence 88764
No 106
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.40 E-value=0.00024 Score=55.09 Aligned_cols=66 Identities=12% Similarity=0.033 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC-cchhhhhhhcccccccccccccccCccc
Q psy17288 217 YEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL-LSCHLQKKAHNQHFFVVNFGYFIRNPSQ 290 (322)
Q Consensus 217 ~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (322)
.+++..++.+.|+.+|++|+++ ++|+.+| |||.+++.+.+....++ ...+|.+.+|.+ +..++ |++
T Consensus 31 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~~~~~p~l~~~~~-------~~~~~-p~~ 100 (100)
T cd03206 31 KETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGGVDLEDYPAIRRWLA-------RIEAL-PGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccCCChhhCcHHHHHHH-------HHHhC-cCC
Confidence 4567889999999999999876 7899988 99999888866544443 456788888988 55554 764
No 107
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=97.40 E-value=0.0002 Score=57.63 Aligned_cols=71 Identities=13% Similarity=0.124 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhccc--CCcchhhhhhhcccccccccccccccCcccc
Q psy17288 217 YEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRIL--PLLSCHLQKKAHNQHFFVVNFGYFIRNPSQK 291 (322)
Q Consensus 217 ~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (322)
.+...+.+.+.|..||++|+++ ++|+.+| ||+.++..+.++... ...+.+|.+.+|.+ +..+| |+.+
T Consensus 33 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~~~~~~~~P~l~~~~~-------rv~~~-p~vk 104 (121)
T cd03209 33 KPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFEPDCLDAFPNLKDFLE-------RFEAL-PKIS 104 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhCccccccChHHHHHHH-------HHHHC-HHHH
Confidence 3446777899999999999865 7899988 999999999888754 23567888899998 55664 9998
Q ss_pred cccc
Q psy17288 292 IKLI 295 (322)
Q Consensus 292 ~~~~ 295 (322)
+...
T Consensus 105 ~~~~ 108 (121)
T cd03209 105 AYMK 108 (121)
T ss_pred HHHh
Confidence 7654
No 108
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=97.39 E-value=0.00021 Score=58.06 Aligned_cols=79 Identities=22% Similarity=0.193 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh---c--CCCCcch-hhhhHhhhhhhhccc--CCcchhhhhhhcccccccccccccccCcc
Q psy17288 218 EQALERVDEVMNRIEAILIE---N--NKGNETS-IAIKLGGRAHYVRIL--PLLSCHLQKKAHNQHFFVVNFGYFIRNPS 289 (322)
Q Consensus 218 ~~~~~~l~~~L~~lE~~L~~---~--l~Gd~~t-ADI~l~~~L~~l~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (322)
+.....+.+.|+.||+.|++ + ++|+++| |||+++..+.++... .....+|.+.+|.+ +..+| |+
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~~~~~~~~P~l~~~~~-------rv~~~-p~ 105 (126)
T cd03210 34 DDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLAPGCLDAFPLLKAFVE-------RLSAR-PK 105 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhChHhhhcChHHHHHHH-------HHHhC-cH
Confidence 34556688999999999984 2 7899988 999999999887643 23567788899999 66675 99
Q ss_pred cccccccCCCCCCccC
Q psy17288 290 QKIKLIPYGQGKPRPL 305 (322)
Q Consensus 290 ~~~~~~~~~~~~~~~~ 305 (322)
+++... .+.-++.|+
T Consensus 106 v~~~~~-~~~~~~~~~ 120 (126)
T cd03210 106 LKAYLE-SDAFKNRPI 120 (126)
T ss_pred HHHHHh-CcCCCCCCC
Confidence 988663 333444555
No 109
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=97.36 E-value=0.00014 Score=58.72 Aligned_cols=65 Identities=12% Similarity=0.004 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHh---c--CCCCcch-hhhhHhhhhhhhcc-----cC--CcchhhhhhhcccccccccccccccCcc
Q psy17288 223 RVDEVMNRIEAILIE---N--NKGNETS-IAIKLGGRAHYVRI-----LP--LLSCHLQKKAHNQHFFVVNFGYFIRNPS 289 (322)
Q Consensus 223 ~l~~~L~~lE~~L~~---~--l~Gd~~t-ADI~l~~~L~~l~~-----~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (322)
++.+.++.||++|++ + ++| .+| |||++++.+.++.. .| +.+.+|.+.+|.+ +..+| ||
T Consensus 34 ~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~-------~~~~r-p~ 104 (120)
T cd03203 34 EAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIE-------EMNKI-EA 104 (120)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHH-------HHhcc-hH
Confidence 446778888888873 3 788 888 99999999886642 33 3457888899999 55665 99
Q ss_pred ccccccc
Q psy17288 290 QKIKLIP 296 (322)
Q Consensus 290 ~~~~~~~ 296 (322)
++.+.++
T Consensus 105 ~~~~~~~ 111 (120)
T cd03203 105 YTQTKQD 111 (120)
T ss_pred HHhHcCC
Confidence 9999875
No 110
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=97.33 E-value=0.0003 Score=49.41 Aligned_cols=59 Identities=17% Similarity=0.108 Sum_probs=46.5
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeee
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKII 99 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L 99 (322)
+++|..+ ||+|.+++-+|+.+|++|+.+.++... ...+++.+......+|++..||..|
T Consensus 1 V~vy~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~--~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 1 VVVYTKPGCPYCKKAKEFLDEKGIPYEEVDVDEDE--EAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTBEEEEEEGGGSH--HHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred cEEEEcCCCcCHHHHHHHHHHcCCeeeEcccccch--hHHHHHHHHcCCCccCEEEECCEEC
Confidence 3577766 999999999999999999988776532 2345566666788999999888754
No 111
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.31 E-value=0.00022 Score=56.95 Aligned_cols=65 Identities=15% Similarity=0.051 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHHH-h-c-CCCCcch-hhhhHhhhhhhhcccCCcchhhhhhhcccccccccccccccCccccc
Q psy17288 218 EQALERVDEVMNRIEAILI-E-N-NKGNETS-IAIKLGGRAHYVRILPLLSCHLQKKAHNQHFFVVNFGYFIRNPSQKI 292 (322)
Q Consensus 218 ~~~~~~l~~~L~~lE~~L~-~-~-l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (322)
+.+.+.+.+.++.+|..|+ + . ++|+ || ||++++..+.++...|+.-. +...+|.+ +..+| ||++.
T Consensus 41 ~~~~~~~~~~~~~le~~l~~~~~~l~G~-fSiAD~~l~~~~~~~~~~g~~l~-p~l~ay~~-------r~~~r-Pa~~~ 109 (114)
T cd03195 41 EAAQAAAEKLIAVAEALLPPGAANLFGE-WCIADTDLALMLNRLVLNGDPVP-ERLRDYAR-------RQWQR-PSVQA 109 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccCC-ccHHHHHHHHHHHHHHHcCCCCC-HHHHHHHH-------HHHCC-HHHHH
Confidence 4567778899999999995 4 2 7894 88 99999999999988887533 77788988 66775 99865
No 112
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=97.20 E-value=0.00066 Score=55.11 Aligned_cols=60 Identities=18% Similarity=0.194 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhccc-CC--cchhhhhhhcccc
Q psy17288 216 NYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRIL-PL--LSCHLQKKAHNQH 275 (322)
Q Consensus 216 ~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~-~l--~~~~~~~~~~~~~ 275 (322)
..+...+.+++.|+.+|+.|+++ +.|+++| ||+++++.+.+.... ++ .+.+++..+|.++
T Consensus 55 ~~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r 120 (124)
T cd03202 55 GREAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVSPFPLLEEDDPVYDWFER 120 (124)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcCcccccccCChHHHHHHH
Confidence 35678889999999999999876 7899988 999999999888764 43 4677888888874
No 113
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=97.18 E-value=0.00053 Score=52.08 Aligned_cols=61 Identities=20% Similarity=0.160 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCCc----chhhhhhhccc
Q psy17288 214 VQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPLL----SCHLQKKAHNQ 274 (322)
Q Consensus 214 ~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l~----~~~~~~~~~~~ 274 (322)
.+..+...+.+.+.++.||+.|+++ ++|+++| |||.+++.+.++...+.. +.++++.+|.+
T Consensus 31 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~ 98 (100)
T cd00299 31 EAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLGLLDEYPRLAAWYD 98 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhhhhccCccHHHHHH
Confidence 4455677888999999999999876 6899988 999999999999877653 45555566654
No 114
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=97.16 E-value=0.00068 Score=51.22 Aligned_cols=57 Identities=11% Similarity=0.111 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC--------cchhhhhhhcccc
Q psy17288 219 QALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL--------LSCHLQKKAHNQH 275 (322)
Q Consensus 219 ~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l--------~~~~~~~~~~~~~ 275 (322)
+..+++.+.|+.+|+.|+++ ++|+++| |||++++.+.++...++ .+.+|++.+|.++
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r 86 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCER 86 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHH
Confidence 56788999999999999986 7899988 99999999988764322 2356777777763
No 115
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.12 E-value=0.0024 Score=47.38 Aligned_cols=72 Identities=13% Similarity=0.163 Sum_probs=55.2
Q ss_pred EEeecC-CchHHHHHHHHHhcCCC--eEEEEeeCCCCC-CCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHHH
Q psy17288 40 ALRYHD-KQVMRKVIMTLHEKKLN--FKTHLVNLASNE-QYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVED 111 (322)
Q Consensus 40 ~Ly~~~-Sp~s~kVr~~L~ekgi~--y~~v~v~~~~~e-~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~~ 111 (322)
++|+.+ ||+|.+++-+|...+++ |+.+.++..... .....+.+......||.+..+|..+.++..+.++..+
T Consensus 2 ~~f~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~~ 77 (84)
T TIGR02180 2 VVFSKSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYKS 77 (84)
T ss_pred EEEECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 466665 99999999999999999 888888764321 1112345666677999999999999999998887654
No 116
>PHA03050 glutaredoxin; Provisional
Probab=97.11 E-value=0.0021 Score=51.09 Aligned_cols=70 Identities=10% Similarity=0.117 Sum_probs=54.3
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCC---CeEEEEeeCCC-CCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHH
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKL---NFKTHLVNLAS-NEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQ 107 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi---~y~~v~v~~~~-~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~ 107 (322)
.+++|..+ ||||.+++-+|.++|+ +|+.+.++-.. +.....++.+.+...+||.+..+|..|.....+..
T Consensus 14 ~V~vys~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 14 KVTIFVKFTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 36788866 9999999999999999 78877776321 11124566788888899999999999888877765
No 117
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=97.10 E-value=0.0019 Score=47.43 Aligned_cols=54 Identities=28% Similarity=0.390 Sum_probs=46.6
Q ss_pred CchHHHHHHHHHhcCCC---eEEEEeeCCCCCCCchhHHhhCCCCCccEEEe-CCeeecCHHHHHHHH
Q psy17288 46 KQVMRKVIMTLHEKKLN---FKTHLVNLASNEQYESWFLEVNPLGEVPVLVD-GVKIIPDSKRIIQYV 109 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~---y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~d-dg~~L~ES~aI~~YL 109 (322)
++-|..+.++|+..+.+ |+.+..+- + .+.|.|++|+|.+ +++.+.+-..|++||
T Consensus 14 d~ecLa~~~yl~~~~~~~~~~~vv~s~n-------~---~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 14 DPECLAVIAYLKFAGAPEQQFKVVPSNN-------P---WLSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred CHHHHHHHHHHHhCCCCCceEEEEEcCC-------C---CcCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 78999999999999999 77664431 1 3679999999998 999999999999998
No 118
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=97.09 E-value=0.0023 Score=49.99 Aligned_cols=71 Identities=13% Similarity=0.088 Sum_probs=54.3
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCC-CCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHH
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASN-EQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQY 108 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~-e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~Y 108 (322)
.+++|..+ ||+|.+++-+|...|++|+.+.++.... ......+.+......||.+..+|..+.....+...
T Consensus 9 ~Vvvysk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l 81 (99)
T TIGR02189 9 AVVIFSRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMAL 81 (99)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHHH
Confidence 35788877 9999999999999999999887764321 11123455667788999999999999888877663
No 119
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.06 E-value=0.00054 Score=54.78 Aligned_cols=63 Identities=13% Similarity=0.075 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCCcchhhhhhhcccccccccccccccCccccc
Q psy17288 220 ALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPLLSCHLQKKAHNQHFFVVNFGYFIRNPSQKI 292 (322)
Q Consensus 220 ~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (322)
...++.+.++.++++++++ ++|+ +| |||++++.+.++...++... |.+.+|.+ +..+| ||++.
T Consensus 45 ~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~~~~-P~l~~~~~-------rv~~r-Psv~~ 110 (114)
T cd03194 45 DIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGLPLS-PAAQAYVD-------ALLAH-PAMQE 110 (114)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCCCCC-HHHHHHHH-------HHHCC-HHHHH
Confidence 3344444444444444333 7899 99 99999999998877675433 88889999 55664 98864
No 120
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=97.05 E-value=0.001 Score=51.31 Aligned_cols=63 Identities=14% Similarity=0.139 Sum_probs=50.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcch-hhhhHhhhhhhhccc--CC--cchhhhhhhccc
Q psy17288 211 LNNVQNYEQALERVDEVMNRIEAILIENNKGNETS-IAIKLGGRAHYVRIL--PL--LSCHLQKKAHNQ 274 (322)
Q Consensus 211 ~~~~~~~~~~~~~l~~~L~~lE~~L~~~l~Gd~~t-ADI~l~~~L~~l~~~--~l--~~~~~~~~~~~~ 274 (322)
..+++..++....+.+.|+.+|++|+++.- +++| |||++++.+.++... +. .+.+|++.+|++
T Consensus 29 ~~~~~~~~~~~~~~~~~l~~le~~L~~~~~-d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~ 96 (98)
T cd03205 29 KRSQPWLERQRGKIERALDALEAELAKLPL-DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYA 96 (98)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHhhhhCCC-CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHH
Confidence 346778889999999999999999987633 7788 999999999988653 32 356777777776
No 121
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=96.89 E-value=0.0017 Score=50.44 Aligned_cols=61 Identities=20% Similarity=0.194 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh--c--CCCCcch-hhhhHhhhhhhhcccCC---cchhhhhhhcccc
Q psy17288 215 QNYEQALERVDEVMNRIEAILIE--N--NKGNETS-IAIKLGGRAHYVRILPL---LSCHLQKKAHNQH 275 (322)
Q Consensus 215 ~~~~~~~~~l~~~L~~lE~~L~~--~--l~Gd~~t-ADI~l~~~L~~l~~~~l---~~~~~~~~~~~~~ 275 (322)
+..+.....+.+.++.||+.|.+ + ++|+.+| |||++++.+.++...+. ...+|.+.+|.++
T Consensus 35 ~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~p~l~~~~~~ 103 (104)
T cd03192 35 KKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLDPKLLLKKYPKLKALRER 103 (104)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhCchhhHHhChhHHHHHHh
Confidence 34455678899999999999987 4 7899988 99999999998877642 4566777777763
No 122
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=96.76 E-value=0.0068 Score=47.15 Aligned_cols=62 Identities=11% Similarity=0.069 Sum_probs=48.2
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHH
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL 109 (322)
||+|.+++-+|..+|++|+.+.++ .......+..+.+....||.+..+|..+.....+....
T Consensus 27 Cp~C~~ak~lL~~~~i~~~~~di~--~~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l~ 88 (97)
T TIGR00365 27 CGFSARAVQILKACGVPFAYVNVL--EDPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEMY 88 (97)
T ss_pred CchHHHHHHHHHHcCCCEEEEECC--CCHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHHH
Confidence 999999999999999999977663 22222334556777789999999999988887776643
No 123
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=96.54 E-value=0.013 Score=44.80 Aligned_cols=63 Identities=16% Similarity=0.133 Sum_probs=49.9
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHH
Q psy17288 45 DKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109 (322)
Q Consensus 45 ~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL 109 (322)
.||+|.+++-+|...|++|+.+.++-. .....+..+.....+||++..+|..|.+...+...-
T Consensus 22 ~Cp~C~~ak~~L~~~~i~y~~idv~~~--~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~ 84 (90)
T cd03028 22 RCGFSRKVVQILNQLGVDFGTFDILED--EEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMH 84 (90)
T ss_pred CCcHHHHHHHHHHHcCCCeEEEEcCCC--HHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHH
Confidence 399999999999999999999877532 222345556777789999998999999888887743
No 124
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=95.80 E-value=0.013 Score=45.20 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc----CCCCcch-hhhhHhhhhhhhcccCCcchhhhhhhcccc
Q psy17288 216 NYEQALERVDEVMNRIEAILIEN----NKGNETS-IAIKLGGRAHYVRILPLLSCHLQKKAHNQH 275 (322)
Q Consensus 216 ~~~~~~~~l~~~L~~lE~~L~~~----l~Gd~~t-ADI~l~~~L~~l~~~~l~~~~~~~~~~~~~ 275 (322)
..+...+++.+.|..+|+.|+++ ++|+.+| ||+++.+.|..+....+....|++.+|+++
T Consensus 32 ~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~~~~~~~p~L~~w~~r 96 (99)
T PF14497_consen 32 SGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWADFPKDYPNLVRWYER 96 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCCHHTTTCHHHHHHHHH
T ss_pred hHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhcccccccHHHHHHHHh
Confidence 34567788999999999999985 6899977 999999988666533122366777777763
No 125
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=95.14 E-value=0.057 Score=43.94 Aligned_cols=47 Identities=15% Similarity=0.185 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhccc
Q psy17288 214 VQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRIL 260 (322)
Q Consensus 214 ~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~ 260 (322)
....++..+.+++.|+.|++.|.++ +.|+++| +|+++++.|.++-..
T Consensus 52 r~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~ 101 (126)
T cd03211 52 DKTLDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTT 101 (126)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhc
Confidence 3355677888899999999999987 7899987 999999998777543
No 126
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=94.87 E-value=0.082 Score=51.86 Aligned_cols=68 Identities=10% Similarity=0.062 Sum_probs=49.4
Q ss_pred ceeEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHH-h--------hCCCCCccEEEeCCeeecCHHHHH
Q psy17288 37 CLWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFL-E--------VNPLGEVPVLVDGVKIIPDSKRII 106 (322)
Q Consensus 37 ~~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l-~--------~nP~gkVPvL~ddg~~L~ES~aI~ 106 (322)
..+++|..+ ||+|.++.-+|..+||+|+.+.++- .+. ..++. + ......||++..+|..+..-..+.
T Consensus 2 ~~V~vys~~~Cp~C~~aK~~L~~~gi~~~~idi~~--~~~-~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igGf~~l~ 78 (410)
T PRK12759 2 VEVRIYTKTNCPFCDLAKSWFGANDIPFTQISLDD--DVK-RAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGGYDNLM 78 (410)
T ss_pred CcEEEEeCCCCHHHHHHHHHHHHCCCCeEEEECCC--Chh-HHHHHHHHhhccccccCCCCccCeEEECCEEEeCchHHH
Confidence 346888877 9999999999999999999887762 211 12222 2 235668999998888877766665
Q ss_pred H
Q psy17288 107 Q 107 (322)
Q Consensus 107 ~ 107 (322)
.
T Consensus 79 ~ 79 (410)
T PRK12759 79 A 79 (410)
T ss_pred H
Confidence 4
No 127
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=94.71 E-value=0.05 Score=45.01 Aligned_cols=49 Identities=16% Similarity=0.128 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcch-hhhhHhhhhhhhcccCC
Q psy17288 214 VQNYEQALERVDEVMNRIEAILIEN--NKGNETS-IAIKLGGRAHYVRILPL 262 (322)
Q Consensus 214 ~~~~~~~~~~l~~~L~~lE~~L~~~--l~Gd~~t-ADI~l~~~L~~l~~~~l 262 (322)
....++..++..+.|+.||+.|.++ +.|+++| +|+.+++.+..+-..++
T Consensus 59 ~~~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~ 110 (137)
T cd03212 59 TEVEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPL 110 (137)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccC
Confidence 4456677888899999999999987 7899887 99999988876644333
No 128
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=94.16 E-value=0.2 Score=42.01 Aligned_cols=62 Identities=10% Similarity=0.143 Sum_probs=47.2
Q ss_pred CCchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCC----CCccEEEeCCeeecCHHHHHHH
Q psy17288 45 DKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPL----GEVPVLVDGVKIIPDSKRIIQY 108 (322)
Q Consensus 45 ~Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~----gkVPvL~ddg~~L~ES~aI~~Y 108 (322)
..++|.+|+.+|+.+||+|+.+.|+.. .....+..+.... ..||.+..+|..|.....+.+.
T Consensus 15 t~~~C~~ak~iL~~~~V~~~e~DVs~~--~~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~L 80 (147)
T cd03031 15 TFEDCNNVRAILESFRVKFDERDVSMD--SGFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLRL 80 (147)
T ss_pred cChhHHHHHHHHHHCCCcEEEEECCCC--HHHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHHH
Confidence 379999999999999999998877642 1223344454333 6899999999999998888773
No 129
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=93.57 E-value=0.26 Score=34.79 Aligned_cols=56 Identities=9% Similarity=-0.036 Sum_probs=38.2
Q ss_pred eEEeecC-CchHHHHHHHHHhc-----CCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeec
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEK-----KLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIP 100 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ek-----gi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ 100 (322)
+++|+.+ ||+|.+++-+|++. +++|..+ |... .++..+......+|++..+|..++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~i--d~~~----~~~l~~~~~i~~vPti~i~~~~~~ 64 (67)
T cd02973 3 IEVFVSPTCPYCPDAVQAANRIAALNPNISAEMI--DAAE----FPDLADEYGVMSVPAIVINGKVEF 64 (67)
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHhCCceEEEEE--Eccc----CHhHHHHcCCcccCEEEECCEEEE
Confidence 5678766 99999999888875 4555444 4322 234555555668999997776654
No 130
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=93.24 E-value=0.12 Score=41.24 Aligned_cols=32 Identities=19% Similarity=0.141 Sum_probs=28.4
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
|+++|+.+ |+.|++++-.|+++|++|+.+.+.
T Consensus 1 mi~iY~~~~C~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 1 MIKLYTSPSCSSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCceEEEecC
Confidence 36899987 999999999999999999988663
No 131
>PRK10824 glutaredoxin-4; Provisional
Probab=93.15 E-value=0.35 Score=38.86 Aligned_cols=62 Identities=8% Similarity=-0.004 Sum_probs=49.0
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHH
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL 109 (322)
||||.++.-+|...|++|..+.++-. ......+.......+||-+-.+|..|..+..+....
T Consensus 30 Cpyc~~ak~lL~~~~i~~~~idi~~d--~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l~ 91 (115)
T PRK10824 30 CGFSAQAVQALSACGERFAYVDILQN--PDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMY 91 (115)
T ss_pred CchHHHHHHHHHHcCCCceEEEecCC--HHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHHH
Confidence 99999999999999999988766432 122345567777889999999999999888777643
No 132
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=93.12 E-value=0.12 Score=42.36 Aligned_cols=32 Identities=19% Similarity=0.121 Sum_probs=28.5
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
|+++|+.+ |++|+|++-.|.++||+|+.+.+.
T Consensus 1 mi~iY~~~~C~~C~ka~~~L~~~gi~~~~idi~ 33 (131)
T PRK01655 1 MVTLFTSPSCTSCRKAKAWLEEHDIPFTERNIF 33 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCcEEeecc
Confidence 37899987 999999999999999999988764
No 133
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=92.65 E-value=0.14 Score=40.72 Aligned_cols=31 Identities=13% Similarity=0.035 Sum_probs=27.7
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
+++|+.+ |++|+|++-.|+++|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (111)
T cd03036 1 LKFYEYPKCSTCRKAKKWLDEHGVDYTAIDIV 32 (111)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCceEEeccc
Confidence 4788877 999999999999999999988764
No 134
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=92.53 E-value=0.17 Score=39.63 Aligned_cols=31 Identities=13% Similarity=0.044 Sum_probs=27.5
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
+++|+.+ |++|++++-.|+++|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (105)
T cd02977 1 ITIYGNPNCSTSRKALAWLEEHGIEYEFIDYL 32 (105)
T ss_pred CEEEECCCCHHHHHHHHHHHHcCCCcEEEeec
Confidence 3688877 999999999999999999988774
No 135
>PTZ00062 glutaredoxin; Provisional
Probab=92.46 E-value=0.41 Score=42.43 Aligned_cols=61 Identities=11% Similarity=0.086 Sum_probs=47.5
Q ss_pred CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHH
Q psy17288 46 KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQY 108 (322)
Q Consensus 46 Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~Y 108 (322)
||+|+++.-+|...|++|+...++ ..+.......+.+....||.+..+|..|.....+.+.
T Consensus 128 C~~C~~~k~~L~~~~i~y~~~DI~--~d~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~l 188 (204)
T PTZ00062 128 CRFSNAVVNMLNSSGVKYETYNIF--EDPDLREELKVYSNWPTYPQLYVNGELIGGHDIIKEL 188 (204)
T ss_pred ChhHHHHHHHHHHcCCCEEEEEcC--CCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHH
Confidence 999999999999999999876554 3322234455667778999999989988888777663
No 136
>PRK12559 transcriptional regulator Spx; Provisional
Probab=91.92 E-value=0.26 Score=40.50 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=28.8
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
|+++|+.+ |+.|++++-.|+++|++|+.+.+.
T Consensus 1 mi~iY~~~~C~~crkA~~~L~~~gi~~~~~di~ 33 (131)
T PRK12559 1 MVVLYTTASCASCRKAKAWLEENQIDYTEKNIV 33 (131)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCCeEEEEee
Confidence 47899988 999999999999999999988774
No 137
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=91.05 E-value=0.31 Score=40.10 Aligned_cols=32 Identities=13% Similarity=0.147 Sum_probs=28.6
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
|+++|+.+ |+.|+|++-.|...|++|+.+.+.
T Consensus 1 Mi~iY~~~~C~~crkA~~~L~~~~i~~~~~d~~ 33 (132)
T PRK13344 1 MIKIYTISSCTSCKKAKTWLNAHQLSYKEQNLG 33 (132)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 37899987 999999999999999999988764
No 138
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=90.29 E-value=0.46 Score=38.27 Aligned_cols=32 Identities=13% Similarity=0.066 Sum_probs=28.8
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
++++|+.| |.-|+|++-.|++.||+|+.+.+.
T Consensus 2 ~itiy~~p~C~t~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 2 MITIYGNPNCSTCRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCCCcEEEEee
Confidence 68999988 999999999999999999987653
No 139
>PRK10026 arsenate reductase; Provisional
Probab=90.20 E-value=0.46 Score=39.60 Aligned_cols=33 Identities=3% Similarity=-0.116 Sum_probs=29.4
Q ss_pred cceeEEeecC-CchHHHHHHHHHhcCCCeEEEEe
Q psy17288 36 CCLWALRYHD-KQVMRKVIMTLHEKKLNFKTHLV 68 (322)
Q Consensus 36 ~~~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v 68 (322)
|.++++|+.+ |.-|+|++-.|++.|++|+.+.+
T Consensus 1 m~~i~iY~~p~Cst~RKA~~wL~~~gi~~~~~d~ 34 (141)
T PRK10026 1 MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHY 34 (141)
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHCCCCcEEEee
Confidence 3568999988 99999999999999999998766
No 140
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=90.09 E-value=0.39 Score=38.42 Aligned_cols=31 Identities=6% Similarity=-0.029 Sum_probs=27.2
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
+++|+.+ |+.|++++-.|+++|++|+.+.+.
T Consensus 1 i~iY~~~~C~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 1 IKVYGSPNCTTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCceEEEecC
Confidence 3688877 999999999999999999987663
No 141
>KOG1752|consensus
Probab=90.03 E-value=2 Score=33.89 Aligned_cols=71 Identities=11% Similarity=0.084 Sum_probs=53.4
Q ss_pred EEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCC-CCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHHH
Q psy17288 40 ALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLAS-NEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVE 110 (322)
Q Consensus 40 ~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~-~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL~ 110 (322)
.+|.-. ||+|.+++-+|...|+.+..+.+|-.. +......+.++....+||.+-.+|..+..+..+..+=.
T Consensus 17 VifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 17 VIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMALHK 89 (104)
T ss_pred EEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHHHH
Confidence 445544 899999999999999999988887653 22223334456667799999999999998888876543
No 142
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=88.47 E-value=0.64 Score=37.12 Aligned_cols=31 Identities=3% Similarity=-0.185 Sum_probs=27.6
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
+++|+.+ |+-|+|++-.|+++|++|+.+.+.
T Consensus 2 i~iy~~p~C~~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 2 IIFYEKPGCANNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred EEEEECCCCHHHHHHHHHHHHcCCCcEEeehh
Confidence 5789988 999999999999999999987653
No 143
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=88.18 E-value=0.69 Score=36.40 Aligned_cols=31 Identities=13% Similarity=0.060 Sum_probs=27.3
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEee
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVN 69 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~ 69 (322)
+++|+.+ |+-|++++-.|.+.|++|+.+.+.
T Consensus 1 i~iy~~~~C~~crka~~~L~~~~i~~~~~di~ 32 (105)
T cd03035 1 ITLYGIKNCDTVKKARKWLEARGVAYTFHDYR 32 (105)
T ss_pred CEEEeCCCCHHHHHHHHHHHHcCCCeEEEecc
Confidence 4688877 999999999999999999988664
No 144
>PRK10853 putative reductase; Provisional
Probab=87.59 E-value=0.74 Score=37.07 Aligned_cols=31 Identities=13% Similarity=0.138 Sum_probs=27.6
Q ss_pred eeEEeecC-CchHHHHHHHHHhcCCCeEEEEe
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEKKLNFKTHLV 68 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v 68 (322)
|+++|+.+ |.-|+|++-.|++.|++|+.+.+
T Consensus 1 Mi~iy~~~~C~t~rkA~~~L~~~~i~~~~~d~ 32 (118)
T PRK10853 1 MVTLYGIKNCDTIKKARRWLEAQGIDYRFHDY 32 (118)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHcCCCcEEeeh
Confidence 37899988 99999999999999999987755
No 145
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=87.50 E-value=6.7 Score=28.23 Aligned_cols=56 Identities=11% Similarity=-0.053 Sum_probs=38.2
Q ss_pred eeEEeecC-CchHHHHHHHHHh----cCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCe
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHE----KKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVK 97 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~e----kgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~ 97 (322)
.+++|+.+ |+.|..+.-.|+. .+..+....||... .++..+......+|+++.+|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~----~~~~~~~~~v~~vPt~~~~g~ 62 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVME----NPQKAMEYGIMAVPAIVINGD 62 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCcc----CHHHHHHcCCccCCEEEECCE
Confidence 46788876 9999988877754 35456666777543 334445556678999997664
No 146
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=87.03 E-value=2.1 Score=34.02 Aligned_cols=67 Identities=16% Similarity=0.229 Sum_probs=40.5
Q ss_pred CchHHHHHHHHHhc---CCCeEEEEeeCCCCCCCchhHHhh-CC-CCCccEEE-eCCe-------------eecCHHHHH
Q psy17288 46 KQVMRKVIMTLHEK---KLNFKTHLVNLASNEQYESWFLEV-NP-LGEVPVLV-DGVK-------------IIPDSKRII 106 (322)
Q Consensus 46 Sp~s~kVr~~L~ek---gi~y~~v~v~~~~~e~~~~~~l~~-nP-~gkVPvL~-ddg~-------------~L~ES~aI~ 106 (322)
||.|..+.=+|..- .-..+.+.|++... ..+..++ .. ....|+|| .+|. .|.|+..|+
T Consensus 24 Cp~c~~iEGlLa~~P~l~~~ldV~rV~f~RP---R~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~ 100 (112)
T PF11287_consen 24 CPHCAAIEGLLASFPDLRERLDVRRVDFPRP---RQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRIL 100 (112)
T ss_pred CCchHHHHhHHhhChhhhhcccEEEeCCCCc---hHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHH
Confidence 35555665555543 22344455555432 2233322 22 35689999 5444 799999999
Q ss_pred HHHHHhcCC
Q psy17288 107 QYVEDNFSN 115 (322)
Q Consensus 107 ~YL~~~~~~ 115 (322)
+||.++|+-
T Consensus 101 ~~La~r~g~ 109 (112)
T PF11287_consen 101 RYLAERHGF 109 (112)
T ss_pred HHHHHHcCC
Confidence 999999874
No 147
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=85.82 E-value=2.8 Score=32.17 Aligned_cols=58 Identities=19% Similarity=0.325 Sum_probs=41.7
Q ss_pred hHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCC----CCCccEEEeCCeeecCHHHHHH
Q psy17288 48 VMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNP----LGEVPVLVDGVKIIPDSKRIIQ 107 (322)
Q Consensus 48 ~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP----~gkVPvL~ddg~~L~ES~aI~~ 107 (322)
.|++|+.+|.-+||+|+.+.|+... ....+..+..+ ...||-+-.+|..+.+...+..
T Consensus 18 ~~~~v~~lL~~k~I~f~eiDI~~d~--~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 18 RQQEVLGFLEAKKIEFEEVDISMNE--ENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred HHHHHHHHHHHCCCceEEEecCCCH--HHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 4667899999999999998886532 22334444433 4689988888888888866655
No 148
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=84.46 E-value=3.1 Score=26.99 Aligned_cols=50 Identities=24% Similarity=0.214 Sum_probs=31.8
Q ss_pred EeecC-CchHHHHHHHHH-----hcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE
Q psy17288 41 LRYHD-KQVMRKVIMTLH-----EKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV 93 (322)
Q Consensus 41 Ly~~~-Sp~s~kVr~~L~-----ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ 93 (322)
+|+.. |+.|++++..+. ..++.+..+.++-... .......++...+|+++
T Consensus 3 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~~~ 58 (69)
T cd01659 3 LFYAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPA---LEKELKRYGVGGVPTLV 58 (69)
T ss_pred EEECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChH---HhhHHHhCCCccccEEE
Confidence 34443 899999999999 4555555554433221 22223467888999998
No 149
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=84.04 E-value=1.6 Score=35.66 Aligned_cols=30 Identities=3% Similarity=-0.094 Sum_probs=27.1
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEe
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLV 68 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v 68 (322)
+++|+.+ |.-|+|++-.|+++|++|+.+.+
T Consensus 3 i~iY~~p~Cst~RKA~~~L~~~gi~~~~~d~ 33 (126)
T TIGR01616 3 IIFYEKPGCANNARQKAALKASGHDVEVQDI 33 (126)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCCcEEEec
Confidence 5788887 99999999999999999998765
No 150
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=84.01 E-value=1 Score=36.00 Aligned_cols=46 Identities=13% Similarity=0.019 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhc---CCCCcchhhhhHhhhhhhhcccCCc
Q psy17288 218 EQALERVDEVMNRIEAILIEN---NKGNETSIAIKLGGRAHYVRILPLL 263 (322)
Q Consensus 218 ~~~~~~l~~~L~~lE~~L~~~---l~Gd~~tADI~l~~~L~~l~~~~l~ 263 (322)
+.+...+++++...++.|... |.|+-.+||..++.+|+++..-|..
T Consensus 42 ~~a~~~a~kL~~~a~~ll~~g~~~LFGewsIAD~dlA~ml~Rl~~~gd~ 90 (117)
T PF14834_consen 42 EAAQAAAQKLIAVAERLLADGGPNLFGEWSIADADLALMLNRLVTYGDP 90 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--SSTTSS--HHHHHHHHHHHHHHTTT--
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHHHHHcCCC
Confidence 445666777888888877754 7888777999999999999888763
No 151
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=82.35 E-value=8.5 Score=27.97 Aligned_cols=54 Identities=9% Similarity=-0.012 Sum_probs=38.0
Q ss_pred eEEeecCCchHHHH----HHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeee
Q psy17288 39 WALRYHDKQVMRKV----IMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKII 99 (322)
Q Consensus 39 ~~Ly~~~Sp~s~kV----r~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L 99 (322)
+.+|...||.|..+ .-++++.|.+++.+.++- .++..+ .-...+|+|+-+|..+
T Consensus 3 i~~~a~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~~------~~~a~~-~~v~~vPti~i~G~~~ 60 (76)
T TIGR00412 3 IQIYGTGCANCQMTEKNVKKAVEELGIDAEFEKVTD------MNEILE-AGVTATPGVAVDGELV 60 (76)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHcCCCeEEEEeCC------HHHHHH-cCCCcCCEEEECCEEE
Confidence 56666559999988 668888899888877761 222223 3466899999777554
No 152
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=82.09 E-value=1.3 Score=37.18 Aligned_cols=37 Identities=8% Similarity=0.065 Sum_probs=28.9
Q ss_pred CCCCcch-hhhhHhhhhhhhccc-CC--cchhhhhhhcccc
Q psy17288 239 NKGNETS-IAIKLGGRAHYVRIL-PL--LSCHLQKKAHNQH 275 (322)
Q Consensus 239 l~Gd~~t-ADI~l~~~L~~l~~~-~l--~~~~~~~~~~~~~ 275 (322)
++|+..+ |||++.+.|..+..+ ++ ...+|+..+|+++
T Consensus 102 laGd~ptIADisvyg~l~s~e~~~~~~Dl~~~p~I~~W~eR 142 (149)
T cd03197 102 HGGSKPNLADLAVYGVLRSVEGHPAFKDMVEETKIGEWYER 142 (149)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHhccccchhhCcCHHHHHHH
Confidence 7898877 999999999988776 43 3366777788873
No 153
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=80.85 E-value=10 Score=28.01 Aligned_cols=53 Identities=17% Similarity=0.145 Sum_probs=39.0
Q ss_pred eEEeecC-CchHHHHHHHHHhcC--CCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCC
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKK--LNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGV 96 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekg--i~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg 96 (322)
++||.-+ |+.|..++-.|.... .+++...||+.. .+++.+..- -.||||..+|
T Consensus 2 l~l~~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~----d~~l~~~Y~-~~IPVl~~~~ 57 (81)
T PF05768_consen 2 LTLYTKPGCHLCDEAKEILEEVAAEFPFELEEVDIDE----DPELFEKYG-YRIPVLHIDG 57 (81)
T ss_dssp EEEEE-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTT----THHHHHHSC-TSTSEEEETT
T ss_pred EEEEcCCCCChHHHHHHHHHHHHhhcCceEEEEECCC----CHHHHHHhc-CCCCEEEEcC
Confidence 4678877 999999999999754 467788888874 344555553 4899999666
No 154
>PHA02125 thioredoxin-like protein
Probab=80.77 E-value=5.7 Score=28.75 Aligned_cols=50 Identities=14% Similarity=0.072 Sum_probs=35.5
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEe
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVD 94 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~d 94 (322)
+.+|+.+ |+.|+.+.-.|+. ++++...||... .++..+......+|++++
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~~--~~~~~~~vd~~~----~~~l~~~~~v~~~PT~~~ 52 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLAN--VEYTYVDVDTDE----GVELTAKHHIRSLPTLVN 52 (75)
T ss_pred EEEEECCCCHhHHHHHHHHHH--HhheEEeeeCCC----CHHHHHHcCCceeCeEEC
Confidence 5667766 9999998888864 566666666432 356666666779999994
No 155
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=80.53 E-value=2.3 Score=33.82 Aligned_cols=30 Identities=10% Similarity=0.036 Sum_probs=26.6
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEe
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLV 68 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v 68 (322)
+++|+.+ |.-|+|++-.|++.|++|+.+.+
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di 31 (114)
T TIGR00014 1 VTIYHNPRCSKSRNTLALLEDKGIEPEVVKY 31 (114)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEec
Confidence 4688887 99999999999999999997755
No 156
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=79.48 E-value=2.6 Score=33.38 Aligned_cols=30 Identities=10% Similarity=0.001 Sum_probs=26.5
Q ss_pred eEEeecC-CchHHHHHHHHHhcCCCeEEEEe
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKLNFKTHLV 68 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v 68 (322)
+++|+.+ |.-|+|++-.|++.|++|+.+.+
T Consensus 1 i~iy~~~~C~t~rkA~~~L~~~~i~~~~~di 31 (112)
T cd03034 1 ITIYHNPRCSKSRNALALLEEAGIEPEIVEY 31 (112)
T ss_pred CEEEECCCCHHHHHHHHHHHHCCCCeEEEec
Confidence 4688887 99999999999999999998755
No 157
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=78.91 E-value=5.8 Score=29.27 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=41.8
Q ss_pred EEeecC-CchHHHHHHHHHhcCCCeEEEEeeCCCC--------CCCchhHH--hhCCCCCccEEE-eCCeeec
Q psy17288 40 ALRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASN--------EQYESWFL--EVNPLGEVPVLV-DGVKIIP 100 (322)
Q Consensus 40 ~Ly~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~--------e~~~~~~l--~~nP~gkVPvL~-ddg~~L~ 100 (322)
+||+.. ||-|--..-.|+-.+++|+.+.+.-... -...++|- +.|..--+|+|. +||.++.
T Consensus 5 ~lfgsn~Cpdca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 5 KLFGSNLCPDCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred eeeccccCcchHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 788866 9999999999999999999887742210 01134443 344445689998 6776654
No 158
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=78.00 E-value=1.4 Score=35.60 Aligned_cols=28 Identities=21% Similarity=0.440 Sum_probs=14.2
Q ss_pred CccEEEe--CCeeecCHHHHHHHHHHhcCC
Q psy17288 88 EVPVLVD--GVKIIPDSKRIIQYVEDNFSN 115 (322)
Q Consensus 88 kVPvL~d--dg~~L~ES~aI~~YL~~~~~~ 115 (322)
.-|-|.+ +|..|.|+.||++||.+-|.+
T Consensus 35 ~~~~L~~~~~gF~L~e~NAIvrYl~nDF~~ 64 (122)
T PF09635_consen 35 SGPLLKDKKSGFELFEPNAIVRYLANDFEG 64 (122)
T ss_dssp -S--EEE-S--S----HHHHHHHHTT--TT
T ss_pred ccceeeecCCceEEecccHHHHHHHhhcCC
Confidence 4588853 789999999999999998864
No 159
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=76.68 E-value=9 Score=28.98 Aligned_cols=61 Identities=8% Similarity=-0.106 Sum_probs=38.9
Q ss_pred cccceeEEeecC-CchHHHHHHHHHhc-----CCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeec
Q psy17288 34 EVCCLWALRYHD-KQVMRKVIMTLHEK-----KLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIP 100 (322)
Q Consensus 34 ~~~~~~~Ly~~~-Sp~s~kVr~~L~ek-----gi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ 100 (322)
..+..+.+|..+ |++|..+.-++.+. ++.+..+.++ . .++..+...-..||+++-+|..+.
T Consensus 11 ~~pv~i~~F~~~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~--~----~~e~a~~~~V~~vPt~vidG~~~~ 77 (89)
T cd03026 11 NGPINFETYVSLSCHNCPDVVQALNLMAVLNPNIEHEMIDGA--L----FQDEVEERGIMSVPAIFLNGELFG 77 (89)
T ss_pred CCCEEEEEEECCCCCCcHHHHHHHHHHHHHCCCceEEEEEhH--h----CHHHHHHcCCccCCEEEECCEEEE
Confidence 334557778766 99999887777665 4555544432 2 344555555668999997665543
No 160
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=76.26 E-value=7.7 Score=31.90 Aligned_cols=53 Identities=15% Similarity=0.115 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCCcch-hhhhHhhhhhhhccc-CCcchhh-hhhhccc
Q psy17288 220 ALERVDEVMNRIEAILIEN-NKGNETS-IAIKLGGRAHYVRIL-PLLSCHL-QKKAHNQ 274 (322)
Q Consensus 220 ~~~~l~~~L~~lE~~L~~~-l~Gd~~t-ADI~l~~~L~~l~~~-~l~~~~~-~~~~~~~ 274 (322)
...+++..|..+|..+... ..+..++ -||.+.+.|.-+-.. |+. +| +.++|++
T Consensus 60 ~i~~l~~~L~~Le~ll~~~~~~n~~LS~dDi~lFp~LR~Ltivkgi~--~P~~V~~Y~~ 116 (132)
T PF04399_consen 60 LIAELNADLEELEPLLASPNAVNGELSIDDIILFPILRSLTIVKGIQ--WPPKVRAYMD 116 (132)
T ss_dssp HHHHHHHHHHHHHHH-SCTTBTTSS--HHHHHHHHHHHHHCTCTTS-----HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHHhhhhhccCCc--CCHHHHHHHH
Confidence 4455556666666655543 2344676 899999999988776 552 22 2246655
No 161
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=70.38 E-value=46 Score=27.22 Aligned_cols=44 Identities=11% Similarity=0.218 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCCCcch-hhhhHhhhhhhhccc-CC
Q psy17288 219 QALERVDEVMNRIEAILIEN-NKGNETS-IAIKLGGRAHYVRIL-PL 262 (322)
Q Consensus 219 ~~~~~l~~~L~~lE~~L~~~-l~Gd~~t-ADI~l~~~L~~l~~~-~l 262 (322)
....+++..|..++..+... ..+..++ -||.+.+.|.-+-.. |+
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~~n~~ls~DDi~lFp~LR~Lt~vkgi 106 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEAVNGQLSTDDIILFPILRNLTLVKGL 106 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCccccCCcCCHHHHHHHHHHhhhhhhcCC
Confidence 34556666677777666332 3444566 899999999887765 55
No 162
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=70.05 E-value=15 Score=28.72 Aligned_cols=62 Identities=8% Similarity=0.071 Sum_probs=43.1
Q ss_pred CchHHHHHHHHHhcC-CCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecCHHHHHHHH
Q psy17288 46 KQVMRKVIMTLHEKK-LNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109 (322)
Q Consensus 46 Sp~s~kVr~~L~ekg-i~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ES~aI~~YL 109 (322)
|.||.++--+|...| ++|..+ |....+.-.....+.+-.-++|=|-.+|..+..|.-|.+-.
T Consensus 30 CGFS~~~vqiL~~~g~v~~~~v--nVL~d~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~Em~ 92 (105)
T COG0278 30 CGFSAQAVQILSACGVVDFAYV--DVLQDPEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVREMY 92 (105)
T ss_pred CCccHHHHHHHHHcCCcceeEE--eeccCHHHHhccHhhcCCCCCceeeECCEEeccHHHHHHHH
Confidence 999999999999999 566554 54432222233334455678999988999988887665543
No 163
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=66.44 E-value=20 Score=25.89 Aligned_cols=55 Identities=13% Similarity=0.016 Sum_probs=33.2
Q ss_pred eEEeecCCchHHHHHH----HHHhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeec
Q psy17288 39 WALRYHDKQVMRKVIM----TLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIP 100 (322)
Q Consensus 39 ~~Ly~~~Sp~s~kVr~----~L~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~ 100 (322)
++++...|++|.++.- ++...|+.++.+. ..+ .++. .......||+|+-||...+
T Consensus 3 I~v~~~~C~~C~~~~~~~~~~~~~~~i~~ei~~--~~~----~~~~-~~ygv~~vPalvIng~~~~ 61 (76)
T PF13192_consen 3 IKVFSPGCPYCPELVQLLKEAAEELGIEVEIID--IED----FEEI-EKYGVMSVPALVINGKVVF 61 (76)
T ss_dssp EEEECSSCTTHHHHHHHHHHHHHHTTEEEEEEE--TTT----HHHH-HHTT-SSSSEEEETTEEEE
T ss_pred EEEeCCCCCCcHHHHHHHHHHHHhcCCeEEEEE--ccC----HHHH-HHcCCCCCCEEEECCEEEE
Confidence 3454444889986655 5555576665443 321 3444 5566779999997776544
No 164
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=63.27 E-value=18 Score=28.19 Aligned_cols=59 Identities=20% Similarity=0.320 Sum_probs=34.2
Q ss_pred hHHHHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhhC---------CCCCccEEEeCCeeecCHHHHHHH
Q psy17288 48 VMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVN---------PLGEVPVLVDGVKIIPDSKRIIQY 108 (322)
Q Consensus 48 ~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~n---------P~gkVPvL~ddg~~L~ES~aI~~Y 108 (322)
..+++...|+.++|+|+.+.+.. .+....+..+.. +....|-|..||..+.+--.+-+-
T Consensus 19 ~q~~v~~iL~a~kI~fe~vDIa~--~e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~Gdye~f~ea 86 (99)
T PF04908_consen 19 RQQRVLMILEAKKIPFEEVDIAM--DEEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCGDYEDFEEA 86 (99)
T ss_dssp HHHHHHHHHHHTT--EEEEETTT---HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEeCcC--CHHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEeeHHHHHHH
Confidence 45589999999999999775543 333233333333 222346777888888876666443
No 165
>KOG1147|consensus
Probab=58.31 E-value=12 Score=37.72 Aligned_cols=43 Identities=7% Similarity=-0.050 Sum_probs=30.2
Q ss_pred eCCeeecCHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHh
Q psy17288 94 DGVKIIPDSKRIIQYVEDNFSNGYKRLLPTDMDSKMDVIALRDEI 138 (322)
Q Consensus 94 ddg~~L~ES~aI~~YL~~~~~~~~~~L~P~~~~~ra~v~~~~~~~ 138 (322)
-+|..+..+..+..|....... .+.|++.+ .++.+|+.|++++
T Consensus 43 ~d~~~l~~a~~~~~~~~~~~~~-~~~lf~~~-~d~~~vd~w~~~s 85 (712)
T KOG1147|consen 43 LDGRKLNGATEPVVYSAALAKA-DPKLFGNN-IDRSQVDHWVSFS 85 (712)
T ss_pred cccccccCCccchhhhhhhccc-CHhHcCCc-ccHHHHHHHHHHh
Confidence 3577778888888887754322 14588876 7789999998643
No 166
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=57.08 E-value=11 Score=29.51 Aligned_cols=27 Identities=15% Similarity=0.068 Sum_probs=19.5
Q ss_pred eecC-CchHHHHHHHHHhcCCCeEEEEe
Q psy17288 42 RYHD-KQVMRKVIMTLHEKKLNFKTHLV 68 (322)
Q Consensus 42 y~~~-Sp~s~kVr~~L~ekgi~y~~v~v 68 (322)
|+.+ |.-|+|++-.|++.|++|+.+.+
T Consensus 1 Y~~~~C~t~rka~~~L~~~gi~~~~~d~ 28 (110)
T PF03960_consen 1 YGNPNCSTCRKALKWLEENGIEYEFIDY 28 (110)
T ss_dssp EE-TT-HHHHHHHHHHHHTT--EEEEET
T ss_pred CcCCCCHHHHHHHHHHHHcCCCeEeehh
Confidence 4545 99999999999999999997644
No 167
>PF06528 Phage_P2_GpE: Phage P2 GpE; InterPro: IPR009493 This entry is represented by Burkholderia phage phiE202, Gp27. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several phage and bacterial proteins which are closely related to the GpE tail protein from Phage P2.
Probab=50.30 E-value=5.5 Score=25.54 Aligned_cols=7 Identities=71% Similarity=1.574 Sum_probs=5.8
Q ss_pred cccccCC
Q psy17288 315 DVFHWTP 321 (322)
Q Consensus 315 ~~~~~~~ 321 (322)
=+|||+|
T Consensus 6 ~~FhW~P 12 (39)
T PF06528_consen 6 WVFHWPP 12 (39)
T ss_pred eecCCCH
Confidence 3799988
No 168
>KOG2501|consensus
Probab=49.03 E-value=53 Score=27.83 Aligned_cols=51 Identities=12% Similarity=0.079 Sum_probs=33.7
Q ss_pred ccccceeEEeecC--CchHH-------HHHHHHHhcCCCeEEEEeeCCCCCCCchhHHhh
Q psy17288 33 QEVCCLWALRYHD--KQVMR-------KVIMTLHEKKLNFKTHLVNLASNEQYESWFLEV 83 (322)
Q Consensus 33 ~~~~~~~~Ly~~~--Sp~s~-------kVr~~L~ekgi~y~~v~v~~~~~e~~~~~~l~~ 83 (322)
.-.++.+.||+.. ||.|| ++--.+...+-+++.+.|+-...+....+|...
T Consensus 30 ~l~gKvV~lyFsA~wC~pCR~FTP~Lk~fYe~l~~~~~~fEVvfVS~D~~~~~~~~y~~~ 89 (157)
T KOG2501|consen 30 ALQGKVVGLYFSAHWCPPCRDFTPILKDFYEELKDNAAPFEVVFVSSDRDEESLDEYMLE 89 (157)
T ss_pred hhCCcEEEEEEEEEECCchhhCCchHHHHHHHHHhcCCceEEEEEecCCCHHHHHHHHHh
Confidence 3445788888754 77777 445556666778999999876544334444443
No 169
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=39.96 E-value=1e+02 Score=23.15 Aligned_cols=54 Identities=11% Similarity=-0.042 Sum_probs=31.3
Q ss_pred eEEeecC-CchHHHHHHHH--------HhcCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE
Q psy17288 39 WALRYHD-KQVMRKVIMTL--------HEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV 93 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L--------~ekgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ 93 (322)
+..|+.+ |+.|++..-.+ ...+ .+....+|....+...+++.+......+|++.
T Consensus 15 lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~~~Pti~ 77 (104)
T cd02953 15 FVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVFGPPTYL 77 (104)
T ss_pred EEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCCCCCEEE
Confidence 3344444 99999765333 1222 46666666543222235666666677899887
No 170
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=36.26 E-value=1.5e+02 Score=21.96 Aligned_cols=58 Identities=9% Similarity=0.068 Sum_probs=34.6
Q ss_pred eeEEeecC-CchHHHHHHHHHhc----CCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE--eCCeee
Q psy17288 38 LWALRYHD-KQVMRKVIMTLHEK----KLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV--DGVKII 99 (322)
Q Consensus 38 ~~~Ly~~~-Sp~s~kVr~~L~ek----gi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~--ddg~~L 99 (322)
.+.+|+.+ |+.|+...-.+... +-.+....+|... .+++....-...+|++. .+|..+
T Consensus 16 vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~----~~~l~~~~~v~~vPt~~i~~~g~~v 80 (97)
T cd02949 16 ILVLYTSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDIDE----DQEIAEAAGIMGTPTVQFFKDKELV 80 (97)
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCC----CHHHHHHCCCeeccEEEEEECCeEE
Confidence 34455544 99999887666551 2135555566532 34555555567899887 566553
No 171
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=34.12 E-value=1.6e+02 Score=20.45 Aligned_cols=53 Identities=15% Similarity=0.174 Sum_probs=32.8
Q ss_pred eEEeecC-CchHHHHHHHHHh-----cCCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE--eCCe
Q psy17288 39 WALRYHD-KQVMRKVIMTLHE-----KKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV--DGVK 97 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~e-----kgi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~--ddg~ 97 (322)
+.+++.+ |+.|+...-.+.+ .++.+-. ++... ...+........+|+++ .+|.
T Consensus 14 ll~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~--i~~~~----~~~~~~~~~v~~~P~~~~~~~g~ 74 (93)
T cd02947 14 VVDFWAPWCGPCKAIAPVLEELAEEYPKVKFVK--VDVDE----NPELAEEYGVRSIPTFLFFKNGK 74 (93)
T ss_pred EEEEECCCChhHHHhhHHHHHHHHHCCCceEEE--EECCC----ChhHHHhcCcccccEEEEEECCE
Confidence 3344444 9999988777776 5555544 44432 34455555567899877 4665
No 172
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit. This family of thioredoxin reductase homologs is found adjacent to alkylhydroperoxide reductase C subunit predominantly in cases where there is only one C subunit in the genome and that genome is lacking the F subunit partner (also a thioredcxin reductase homolog) that is usually found (TIGR03140).
Probab=32.55 E-value=81 Score=32.13 Aligned_cols=59 Identities=8% Similarity=-0.052 Sum_probs=38.0
Q ss_pred ccceeEEeecC-CchHHHHHH----HHHhc-CCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeee
Q psy17288 35 VCCLWALRYHD-KQVMRKVIM----TLHEK-KLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKII 99 (322)
Q Consensus 35 ~~~~~~Ly~~~-Sp~s~kVr~----~L~ek-gi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L 99 (322)
....+++|..+ ||+|-++.- ++.+. +|..+.+.+.. .++..+......||.++-+|..+
T Consensus 476 ~~~~i~v~~~~~C~~Cp~~~~~~~~~~~~~~~i~~~~i~~~~------~~~~~~~~~v~~vP~~~i~~~~~ 540 (555)
T TIGR03143 476 KPVNIKIGVSLSCTLCPDVVLAAQRIASLNPNVEAEMIDVSH------FPDLKDEYGIMSVPAIVVDDQQV 540 (555)
T ss_pred CCeEEEEEECCCCCCcHHHHHHHHHHHHhCCCceEEEEECcc------cHHHHHhCCceecCEEEECCEEE
Confidence 34557787666 888887654 34444 57776665533 35666566677999999666443
No 173
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=31.40 E-value=39 Score=26.67 Aligned_cols=26 Identities=15% Similarity=0.287 Sum_probs=21.8
Q ss_pred ccEEE-eCCeeecCHHHHHHHHHHhcC
Q psy17288 89 VPVLV-DGVKIIPDSKRIIQYVEDNFS 114 (322)
Q Consensus 89 VPvL~-ddg~~L~ES~aI~~YL~~~~~ 114 (322)
+|.+. .+|.++++|..|+++....|.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 46555 799999999999999998875
No 174
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=28.11 E-value=2.9e+02 Score=21.45 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=36.1
Q ss_pred eEEeecC-CchHHHHHHHHHhcCC---CeEEEEeeCCCCCCCchhHHhhCCCCCccEEE--eCCeeec
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEKKL---NFKTHLVNLASNEQYESWFLEVNPLGEVPVLV--DGVKIIP 100 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ekgi---~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~--ddg~~L~ 100 (322)
+..++.+ |+.|+.+.-.+++..- .+....||... .++..+......+|+++ .+|..+.
T Consensus 26 vV~f~a~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~~----~~~l~~~~~v~~vPt~l~fk~G~~v~ 89 (113)
T cd02989 26 VCHFYHPEFFRCKIMDKHLEILAKKHLETKFIKVNAEK----APFLVEKLNIKVLPTVILFKNGKTVD 89 (113)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHcCCCEEEEEEccc----CHHHHHHCCCccCCEEEEEECCEEEE
Confidence 3344444 8999987776655221 23455566543 34566666778999998 5887654
No 175
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=25.23 E-value=2.6e+02 Score=22.17 Aligned_cols=57 Identities=18% Similarity=-0.062 Sum_probs=29.4
Q ss_pred eecC-CchHHHHHHHHHhc----CCCeEEEEeeCCCC-CCC----chhHHhhCC----CCCccEEE--eCCee
Q psy17288 42 RYHD-KQVMRKVIMTLHEK----KLNFKTHLVNLASN-EQY----ESWFLEVNP----LGEVPVLV--DGVKI 98 (322)
Q Consensus 42 y~~~-Sp~s~kVr~~L~ek----gi~y~~v~v~~~~~-e~~----~~~~l~~nP----~gkVPvL~--ddg~~ 98 (322)
++.+ ||+|+.+.-.|.+. ++++-.+.++.... +.. -.+|.+... ...||+++ .+|..
T Consensus 30 f~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~i~~~i~~~PT~v~~k~Gk~ 102 (122)
T TIGR01295 30 IGRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSENNGSFEMSSLNDLTAFRSRFGIPTSFMGTPTFVHITDGKQ 102 (122)
T ss_pred EECCCChhHHHHhHHHHHHHHhcCCcEEEEECCCccCcCcccHHHHHHHHHHcCCcccCCCCCEEEEEeCCeE
Confidence 3444 99999865555443 45554444442211 110 124444433 34599998 47754
No 176
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=24.41 E-value=4e+02 Score=23.17 Aligned_cols=56 Identities=11% Similarity=0.051 Sum_probs=35.4
Q ss_pred cccceeEEeecC-CchHHHHHHHHHhcCC---CeEEEEeeCCCCCCCchhHHhhCCCCCccEEE
Q psy17288 34 EVCCLWALRYHD-KQVMRKVIMTLHEKKL---NFKTHLVNLASNEQYESWFLEVNPLGEVPVLV 93 (322)
Q Consensus 34 ~~~~~~~Ly~~~-Sp~s~kVr~~L~ekgi---~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ 93 (322)
+.+..+.+|+.+ |++|..+..++++.-- .+....+|... .++..+......||+++
T Consensus 132 ~~pv~I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~----~~~~~~~~~V~~vPtl~ 191 (215)
T TIGR02187 132 DEPVRIEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIEANE----NPDLAEKYGVMSVPKIV 191 (215)
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCCC----CHHHHHHhCCccCCEEE
Confidence 345566767765 9999988777765421 23334455432 45566666677899998
No 177
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=23.71 E-value=73 Score=32.09 Aligned_cols=74 Identities=9% Similarity=0.013 Sum_probs=45.4
Q ss_pred ccceeEEeecC-CchHHHHHHHHHhcCC---CeEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecC----HHHHH
Q psy17288 35 VCCLWALRYHD-KQVMRKVIMTLHEKKL---NFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPD----SKRII 106 (322)
Q Consensus 35 ~~~~~~Ly~~~-Sp~s~kVr~~L~ekgi---~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~E----S~aI~ 106 (322)
.+..+++|..+ ||+|..+.-+++..-+ .++...++- +..+++.+..-...||.+..+|..+.+ -..|+
T Consensus 116 ~~~~i~~fv~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~----~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~ 191 (517)
T PRK15317 116 GDFHFETYVSLSCHNCPDVVQALNLMAVLNPNITHTMIDG----ALFQDEVEARNIMAVPTVFLNGEEFGQGRMTLEEIL 191 (517)
T ss_pred CCeEEEEEEcCCCCCcHHHHHHHHHHHHhCCCceEEEEEc----hhCHhHHHhcCCcccCEEEECCcEEEecCCCHHHHH
Confidence 34567788877 8888887666655433 233333332 235677776677799999965544443 34566
Q ss_pred HHHHHh
Q psy17288 107 QYVEDN 112 (322)
Q Consensus 107 ~YL~~~ 112 (322)
..+.+.
T Consensus 192 ~~~~~~ 197 (517)
T PRK15317 192 AKLDTG 197 (517)
T ss_pred HHHhcc
Confidence 666543
No 178
>PF04134 DUF393: Protein of unknown function, DUF393; InterPro: IPR007263 The DCC family, named after the conserved N-terminal DxxCxxC motif, encompasses COG3011 from COG. Proteins in this family are predicted to have a thioredoxin-like fold which, together with the presence of an invariant catalytic cysteine residue, suggests that they are a novel group of thiol-disulphide oxidoreductases []. As some of the bacterial proteins are encoded near penicillin-binding proteins, it has been suggested that these may be involved in redox regulation of cell wall biosynthesis [].
Probab=23.48 E-value=2.4e+02 Score=21.59 Aligned_cols=70 Identities=10% Similarity=0.165 Sum_probs=39.1
Q ss_pred eecC-CchHHHHHHHHHhcCCCeEEEEeeCCCCCCCc-hhHHhh---CCCCCccEEEeCCe-eecCHHHHHHHHHHh
Q psy17288 42 RYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYE-SWFLEV---NPLGEVPVLVDGVK-IIPDSKRIIQYVEDN 112 (322)
Q Consensus 42 y~~~-Sp~s~kVr~~L~ekgi~y~~v~v~~~~~e~~~-~~~l~~---nP~gkVPvL~ddg~-~L~ES~aI~~YL~~~ 112 (322)
+|+. ||.|....-.+...+..-....++....+... .....+ +....+-+ +++|. ....|.|+.+-+...
T Consensus 2 ~YDg~C~lC~~~~~~l~~~d~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~g~~~~~G~~A~~~l~~~~ 77 (114)
T PF04134_consen 2 FYDGDCPLCRREVRFLRRRDRGGRLRFVDIQSEPDQALLASYGISPEDADSRLHL-IDDGERVYRGSDAVLRLLRRL 77 (114)
T ss_pred EECCCCHhHHHHHHHHHhcCCCCCEEEEECCChhhhhHHHhcCcCHHHHcCeeEE-ecCCCEEEEcHHHHHHHHHHc
Confidence 4554 99999877777776653334444442221111 111122 22334444 55665 999999999876653
No 179
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=22.94 E-value=3.2e+02 Score=21.17 Aligned_cols=45 Identities=16% Similarity=0.074 Sum_probs=29.7
Q ss_pred CCchHHHHHHHHHhcCCC---eEEEEeeCCCCCCCchhHHhhCCCCCccEEE
Q psy17288 45 DKQVMRKVIMTLHEKKLN---FKTHLVNLASNEQYESWFLEVNPLGEVPVLV 93 (322)
Q Consensus 45 ~Sp~s~kVr~~L~ekgi~---y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ 93 (322)
+|+.|+.++-+|++..-. ++...+|... .++.........||++.
T Consensus 33 wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~----~~~l~~~~~v~~vPt~~ 80 (113)
T cd02975 33 GCQYCEVTKQLLEELSELSDKLKLEIYDFDE----DKEKAEKYGVERVPTTI 80 (113)
T ss_pred CCCChHHHHHHHHHHHHhcCceEEEEEeCCc----CHHHHHHcCCCcCCEEE
Confidence 389999887777655422 3344455432 45666666778999988
No 180
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=22.66 E-value=3.1e+02 Score=19.88 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=43.6
Q ss_pred eEEeecC-CchHHHHHHHHHhc----CCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE--eCCeee------cCHHHH
Q psy17288 39 WALRYHD-KQVMRKVIMTLHEK----KLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV--DGVKII------PDSKRI 105 (322)
Q Consensus 39 ~~Ly~~~-Sp~s~kVr~~L~ek----gi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~--ddg~~L------~ES~aI 105 (322)
+..++.+ |+.|+...-.+... +-++....||... .+++.+..-...+|++. .+|..+ .+...|
T Consensus 21 vv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~----~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l 96 (103)
T PF00085_consen 21 VVYFYAPWCPPCKAFKPILEKLAKEYKDNVKFAKVDCDE----NKELCKKYGVKSVPTIIFFKNGKEVKRYNGPRNAESL 96 (103)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHHHTTTTSEEEEEETTT----SHHHHHHTTCSSSSEEEEEETTEEEEEEESSSSHHHH
T ss_pred EEEEeCCCCCccccccceecccccccccccccchhhhhc----cchhhhccCCCCCCEEEEEECCcEEEEEECCCCHHHH
Confidence 3344444 99999876544332 2266667777653 35666666688999998 576543 355677
Q ss_pred HHHHHH
Q psy17288 106 IQYVED 111 (322)
Q Consensus 106 ~~YL~~ 111 (322)
..+|.+
T Consensus 97 ~~~i~~ 102 (103)
T PF00085_consen 97 IEFIEK 102 (103)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 777664
No 181
>PHA02278 thioredoxin-like protein
Probab=22.15 E-value=3.7e+02 Score=20.63 Aligned_cols=56 Identities=9% Similarity=0.082 Sum_probs=31.4
Q ss_pred cCCchHHHHHHHHHhc----CCCeEEEEeeCCCCCCCchhHHhhCCCCCccEEE--eCCeee
Q psy17288 44 HDKQVMRKVIMTLHEK----KLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV--DGVKII 99 (322)
Q Consensus 44 ~~Sp~s~kVr~~L~ek----gi~y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~--ddg~~L 99 (322)
.+|+.|+...-.++.. +.......++....+...++.....-...+|+++ .+|..+
T Consensus 24 ~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I~~iPT~i~fk~G~~v 85 (103)
T PHA02278 24 DNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDIMSTPVLIGYKDGQLV 85 (103)
T ss_pred CCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCCccccEEEEEECCEEE
Confidence 4499999766555433 2223345555542211124555555567899998 577654
No 182
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=21.48 E-value=62 Score=32.62 Aligned_cols=74 Identities=11% Similarity=0.027 Sum_probs=44.3
Q ss_pred ccceeEEeecC-CchHHHHHHHHHhcCCC---eEEEEeeCCCCCCCchhHHhhCCCCCccEEEeCCeeecC----HHHHH
Q psy17288 35 VCCLWALRYHD-KQVMRKVIMTLHEKKLN---FKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPD----SKRII 106 (322)
Q Consensus 35 ~~~~~~Ly~~~-Sp~s~kVr~~L~ekgi~---y~~v~v~~~~~e~~~~~~l~~nP~gkVPvL~ddg~~L~E----S~aI~ 106 (322)
....+++|..+ ||+|-.+.-+++...+. ++...+|- +..++..+..-...||.+.-+|..+.+ -..++
T Consensus 117 ~~~~i~~f~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~----~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~ 192 (515)
T TIGR03140 117 GPLHFETYVSLTCQNCPDVVQALNQMALLNPNISHTMIDG----ALFQDEVEALGIQGVPAVFLNGEEFHNGRMDLAELL 192 (515)
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEc----hhCHHHHHhcCCcccCEEEECCcEEEecCCCHHHHH
Confidence 34557788877 89888877776655432 33333332 224666666667799999965544443 23455
Q ss_pred HHHHHh
Q psy17288 107 QYVEDN 112 (322)
Q Consensus 107 ~YL~~~ 112 (322)
+.+...
T Consensus 193 ~~l~~~ 198 (515)
T TIGR03140 193 EKLEET 198 (515)
T ss_pred HHHhhc
Confidence 555443
Done!