RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17288
(322 letters)
>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-5 [TaxId: 123217]}
Length = 85
Score = 63.0 bits (153), Expect = 1e-13
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
R V++ + ++N+ EQ + F+E+NP +P + D ++ +S+ I+ Y+
Sbjct: 14 RSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVELNPQHCIPTMDDHGLVLWESRVILSYL 73
Query: 110 EDNFSNGYKRLLP 122
+ + L P
Sbjct: 74 VSAYGKD-ENLYP 85
>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-3 [TaxId: 123217]}
Length = 84
Score = 61.9 bits (150), Expect = 4e-13
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
R V MT + L NL + E + FL++NP +P LVD + +S+ I Y+
Sbjct: 13 RAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKINPQHCIPTLVDNGFALWESRAICTYL 72
Query: 110 EDNFSNGYKRLLP 122
+ + +L P
Sbjct: 73 AEKYGKD-DKLYP 84
>d1axda2 c.47.1.5 (A:1-80) Class phi GST {Maize (Zea mays), type I
[TaxId: 4577]}
Length = 80
Score = 58.4 bits (141), Expect = 7e-12
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
+ L E +++ +N A+ E L NP G+VP L DG + +S+ I +Y
Sbjct: 15 TRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYA 74
Query: 110 EDNF 113
Sbjct: 75 ARKN 78
>d1e6ba2 c.47.1.5 (A:8-87) Class zeta GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 55.0 bits (132), Expect = 1e-10
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
+V + L K L+++ VNL +Q++S F ++NP+G VP LVDG +I DS II Y+
Sbjct: 14 HRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPALVDGDVVINDSFAIIMYL 73
Query: 110 EDNF 113
++ +
Sbjct: 74 DEKY 77
>d1fw1a2 c.47.1.5 (A:5-87) Class zeta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 83
Score = 53.5 bits (128), Expect = 4e-10
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNE--QYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQ 107
+V + L K +++KT +NL + Q+ F +NP+ +VP L I S II+
Sbjct: 14 WRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDGITIHQSLAIIE 73
Query: 108 YVEDNF 113
Y+E+
Sbjct: 74 YLEETR 79
>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type III
[TaxId: 4577]}
Length = 81
Score = 52.7 bits (126), Expect = 8e-10
Identities = 21/66 (31%), Positives = 41/66 (62%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
+V L+EK L+F+ V+L + + FL +NP G++P LVDG +++ +S+ I +Y+
Sbjct: 15 VRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYI 74
Query: 110 EDNFSN 115
+++
Sbjct: 75 ASKYAS 80
>d1gnwa2 c.47.1.5 (A:2-85) Class phi GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 84
Score = 52.4 bits (125), Expect = 9e-10
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
R+V++ LHEK L+F+ V L E + FL NP G+VP DG + +S+ I QY+
Sbjct: 14 RRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYI 73
Query: 110 EDNFSNGYKRL 120
+ N L
Sbjct: 74 AHRYENQGTNL 84
>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-6 [TaxId: 123217]}
Length = 83
Score = 48.9 bits (116), Expect = 2e-08
Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
+ I+ + + N+ + + ++NP +P LVD ++ +S I+ Y+
Sbjct: 13 QSAILLAKKLGITLNLKKTNVHDPVERD-ALTKLNPQHTIPTLVDNGHVVWESYAIVLYL 71
Query: 110 EDNFSNGYKRLLP 122
+ ++ L P
Sbjct: 72 VETYAKD-DTLYP 83
>d1ljra2 c.47.1.5 (A:1-79) Class theta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 79
Score = 48.5 bits (115), Expect = 2e-08
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
R V + + + + V+L + FL++N LG++P L DG I+ +S I+ Y+
Sbjct: 15 RAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIYL 74
Query: 110 EDNF 113
+
Sbjct: 75 SCKY 78
>d1f2ea2 c.47.1.5 (A:1-80) Class beta GST {Sphingomonas paucimobilis
[TaxId: 13689]}
Length = 80
Score = 48.1 bits (114), Expect = 3e-08
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASN-EQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQ 107
+ L E +F+ V+LA + FL VNP G+VP L D + + ++ I+
Sbjct: 12 LAPHIALRETGADFEAVKVDLAVRKTEAGEDFLTVNPSGKVPALTLDSGETLTENPAILL 71
Query: 108 YVEDNF 113
Y+ D
Sbjct: 72 YIADQN 77
>d2c4ja2 c.47.1.5 (A:2-85) Class mu GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 84
Score = 45.8 bits (108), Expect = 2e-07
Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Query: 51 KVIMTLHEKKLNFKTHLVNLAS------NEQYESWFLEVNPLGEVPVLVDGVKIIPDSKR 104
+ + L +++ + ++ F +P L+DG I S
Sbjct: 15 SIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNA 74
Query: 105 IIQYVEDNF 113
I++Y+
Sbjct: 75 ILRYIARKH 83
>d1k0ma2 c.47.1.5 (A:6-91) Chloride intracellular channel 1 (clic1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 86
Score = 45.5 bits (107), Expect = 3e-07
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
+++ M L K + F V+ + ++ P GE+P L+ G ++ D+ +I +++
Sbjct: 23 QRLFMVLWLKGVTFNVTTVDTKRRTE---TVQKLCPGGELPFLLYGTEVHTDTNKIEEFL 79
Query: 110 EDNF 113
E
Sbjct: 80 EAVL 83
>d1n2aa2 c.47.1.5 (A:1-80) Class beta GST {Escherichia coli [TaxId:
562]}
Length = 80
Score = 45.3 bits (107), Expect = 3e-07
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNE-QYESWFLEVNPLGEVPVLVDG-VKIIPDSKRIIQ 107
+TL E +F V+L + + VNP G+VP L+ ++ + I+Q
Sbjct: 12 LASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNPKGQVPALLLDDGTLLTEGVAIMQ 71
Query: 108 YVEDNF 113
Y+ D+
Sbjct: 72 YLADSV 77
>d1pmta2 c.47.1.5 (A:1-80) Class beta GST {Proteus mirabilis [TaxId:
584]}
Length = 80
Score = 45.0 bits (106), Expect = 4e-07
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYES-WFLEVNPLGEVPVLV-DGVKIIPDSKRIIQ 107
+ L E L+F ++L + + FL +NP G+VPVL D I+ + I+Q
Sbjct: 12 LSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAINPKGQVPVLQLDNGDILTEGVAIVQ 71
Query: 108 YVEDNF 113
Y+ D
Sbjct: 72 YLADLK 77
>d1oyja2 c.47.1.5 (A:2-85) Class tau GST {Rice (Oryza sativa)
[TaxId: 4530]}
Length = 84
Score = 42.3 bits (99), Expect = 3e-06
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
++ + + EK L F+ +L + + ++PVL+ + + +S I+QY+
Sbjct: 18 QRCRIAMAEKGLEFEYREEDLG--NKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYL 75
Query: 110 EDNF 113
+D F
Sbjct: 76 DDAF 79
>d1gula2 c.47.1.5 (A:4-80) Class alpha GST {Human (Homo sapiens),
(a1-1) [TaxId: 9606]}
Length = 77
Score = 40.9 bits (95), Expect = 1e-05
Identities = 8/65 (12%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
V L + F + +VP++ + ++ I+ Y+
Sbjct: 14 ESVRWVLAAAGVEFDEEFLETKEQLYKLQDGN-HLLFQQVPMVEIDGMKLVQTRSILHYI 72
Query: 110 EDNFS 114
D +
Sbjct: 73 ADKHN 77
>d1k0da2 c.47.1.5 (A:109-200) Yeast prion protein ure2p, nitrogen
regulation fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 92
Score = 40.9 bits (95), Expect = 2e-05
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV---DGVKIIPDSKRII 106
KV + L E ++ T ++ E F+ VNP VP L+ I +S I+
Sbjct: 18 FKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPNARVPALIDHGMDNLSIWESGAIL 77
Query: 107 QYVEDNF 113
++ + +
Sbjct: 78 LHLVNKY 84
>d1eema2 c.47.1.5 (A:5-102) Class omega GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 40.7 bits (95), Expect = 2e-05
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGV-KIIPDSKRIIQY 108
+ + L K + + +N + WF + NP G VPVL + ++I +S +Y
Sbjct: 32 ERTRLVLKAKGIRHEVININ---LKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCEY 88
Query: 109 VEDNF 113
+++ +
Sbjct: 89 LDEAY 93
>d2a2ra2 c.47.1.5 (A:1-77) Class pi GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 77
Score = 39.2 bits (91), Expect = 3e-05
Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
+ M L ++ ++K +V + E G++P DG + S I++++
Sbjct: 15 AALRMLLADQGQSWKEEVVTV--ETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHL 72
Query: 110 EDNF 113
Sbjct: 73 GRTL 76
>d1gwca2 c.47.1.5 (A:4-86) Class tau GST {Aegilops tauschii, also
known as Triticum tauschii [TaxId: 37682]}
Length = 83
Score = 38.9 bits (90), Expect = 6e-05
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLG-EVPVLVDGVKIIPDSKRIIQY 108
+V + L K L+++ + + L+ NP+ ++PVL+ + +S I+QY
Sbjct: 16 TRVKLALALKGLSYEDVEED---LYKKSELLLKSNPVHKKIPVLIHNGAPVCESMIILQY 72
Query: 109 VEDNFSN 115
+++ F++
Sbjct: 73 IDEVFAS 79
>d1nhya2 c.47.1.5 (A:1-75) GST-like domain of elongation factor
1-gamma {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 75
Score = 38.5 bits (89), Expect = 7e-05
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Query: 56 LHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVK-IIPDSKRIIQYVED 111
+ + V + + + F PL +VP V + ++ I Y+
Sbjct: 16 VPRGLVKALKLDVKVVTPDAAAEQFARDFPLKKVPAFVGPKGYKLTEAMAINYYLVK 72
>d1k3ya2 c.47.1.5 (A:2-80) Class alpha GST {Human (Homo sapiens),
(a1-1) [TaxId: 9606]}
Length = 79
Score = 38.4 bits (89), Expect = 8e-05
Identities = 8/65 (12%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Query: 49 MRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQY 108
M L + F+ + A + + +VP++ + ++ I+ Y
Sbjct: 15 MESTRWLLAAAGVEFEEKFIKSAED-LDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNY 73
Query: 109 VEDNF 113
+ +
Sbjct: 74 IASKY 78
>d1b48a2 c.47.1.5 (A:2-79) Class alpha GST {Mouse (Mus musculus),
(a1-4) [TaxId: 10090]}
Length = 78
Score = 38.4 bits (89), Expect = 8e-05
Identities = 8/65 (12%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 49 MRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQY 108
M + L + F+ + + + G+VP++ ++ ++ I+ Y
Sbjct: 15 MESIRWLLAAAGVEFEEEFLETREQYE-KMQKDGHLLFGQVPLVEIDGMMLTQTRAILSY 73
Query: 109 VEDNF 113
+ +
Sbjct: 74 LAAKY 78
>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli [TaxId:
562]}
Length = 75
Score = 37.8 bits (87), Expect = 1e-04
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGV-KIIPDSKRIIQY 108
K M K + + H++ + +VP+L + +P+S I+ Y
Sbjct: 13 LKARMIFGLKNIPVELHVLL----NDDAETPTRMVGQKQVPILQKDDSRYMPESMDIVHY 68
Query: 109 VEDNF 113
V+
Sbjct: 69 VDKLD 73
>d2fnoa2 c.47.1.5 (A:1-87) Hypothetical protein AGR_pAT_752p/Atu5508
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 87
Score = 38.2 bits (88), Expect = 1e-04
Identities = 9/66 (13%), Positives = 19/66 (28%), Gaps = 2/66 (3%)
Query: 50 RKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV--DGVKIIPDSKRIIQ 107
+ + L ++ H V+ + PVL+ + I I
Sbjct: 20 QLIRGILAHCGCSWDEHDVDAIEGLMDCGAEKQPVAFMGPPVLIDRERNFAISQMPAIAI 79
Query: 108 YVEDNF 113
Y+ +
Sbjct: 80 YLGERL 85
>d1fhea2 c.47.1.5 (A:1-80) Class alpha GST {Fasciola hepatica
[TaxId: 6192]}
Length = 80
Score = 35.0 bits (80), Expect = 0.001
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 51 KVIMTLHEKKLNFKTHLVNLASNEQYES-WFLEVNPLGEVPVLVDGVKIIPDSKRIIQYV 109
V + L ++ HL E++ S F L +P +D + S I++Y+
Sbjct: 15 PVRLFLEYLGEEYEEHLYGRDDREKWMSEKFNMGLDLPNLPYYIDDKCKLTQSVAIMRYI 74
Query: 110 EDNF 113
D
Sbjct: 75 ADKH 78
>d1tu7a2 c.47.1.5 (A:1-77) Class pi GST {Onchocerca volvulus [TaxId:
6282]}
Length = 77
Score = 32.3 bits (73), Expect = 0.011
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 41 LRYHD-KQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKII 99
L Y + + + + L ++ + F + S G++P L DG + I
Sbjct: 5 LTYFSIRGLAEPIRLFLVDQDIKFIDD----RIAKDDFSSIKSQFQFGQLPCLYDGDQQI 60
Query: 100 PDSKRIIQYVEDNF 113
S I++++ +
Sbjct: 61 VQSGAILRHLARKY 74
>d1okta2 c.47.1.5 (A:1-85) Pf GST {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 85
Score = 30.5 bits (68), Expect = 0.053
Identities = 9/68 (13%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Query: 49 MRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNP---LGEVPVLVDGVKIIPDSKRI 105
+ + + + + + E + +VP+L G I+ S+ I
Sbjct: 16 AELIRLIFAYLGIEYTDKRFGVNGDAFVEFKNFKKEKDTPFEQVPILQIGDLILAQSQAI 75
Query: 106 IQYVEDNF 113
++Y+ +
Sbjct: 76 VRYLSKKY 83
>d1tjla1 a.2.14.1 (A:7-110) DnaK suppressor protein DksA,
alpha-hairpin domain {Escherichia coli [TaxId: 562]}
Length = 104
Score = 29.0 bits (65), Expect = 0.27
Identities = 12/61 (19%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 172 MMDNQSRKPQVIRKAADVNPSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRI 231
+ D R + D + D + D+A ++E+F+ EL N + ++++++ + ++
Sbjct: 45 LRDEVDRT---VTHMQDEAANFPDPV-DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKV 100
Query: 232 E 232
E
Sbjct: 101 E 101
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima
[TaxId: 2336]}
Length = 429
Score = 28.3 bits (62), Expect = 1.2
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 181 QVIRKAADVNPSISDILL-DKATRQEQFNKELNNVQNYEQALERVDEVMNRIE 232
+ K + + LL D+ ++ +EL + + L+ VD + R E
Sbjct: 376 RNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFDISYYLKHVDHIFERFE 428
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB
{Bordetella pertussis [TaxId: 520]}
Length = 68
Score = 25.0 bits (55), Expect = 2.9
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 215 QNYEQALERVDEVMNRIEA 233
Q++E AL ++ +++ +E
Sbjct: 6 QDFETALAELESLVSAMEN 24
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS)
{Staphylococcus aureus [TaxId: 1280]}
Length = 323
Score = 27.0 bits (59), Expect = 3.6
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 255 HYVRILPLLSCHLQKKAHNQHFFVVNFGYFIRNPSQK 291
H + L L Q+ H + I +PS K
Sbjct: 49 HLLPFLTLR--RFQEHGHRPIVLIGGGTGMIGDPSGK 83
>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId:
9606]}
Length = 293
Score = 26.6 bits (57), Expect = 3.9
Identities = 15/92 (16%), Positives = 27/92 (29%), Gaps = 10/92 (10%)
Query: 38 LWALRYHDKQVMRKVIMTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVK 97
L AL ++ + + ++L + T + NE L+ NP +
Sbjct: 199 LHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDALQQNP--------GAFR 250
Query: 98 IIPDSKRIIQYVEDNF--SNGYKRLLPTDMDS 127
+ P F + R P S
Sbjct: 251 LAPALPAWPHRGLSTFPGAEHCLRASPETTLS 282
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of
imidazoleglycerolphosphate synthase HisF {Thermotoga
maritima [TaxId: 2336]}
Length = 200
Score = 25.4 bits (54), Expect = 8.6
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 213 NVQNYEQALERVDEVMNRIEAILIENNKGNETSIAIKLGGRAHYVRILPLLSCHLQKKAH 272
N+ N + ++R E + L+E+ + N+ + + G H+ + L +
Sbjct: 12 NIMNLYRGVKRASENFEDVSIELVESPR-NDLYDLLFIPGVGHFGEGMRRLRENDLIDFV 70
Query: 273 NQHFFVVNFGYFIRN 287
+H + +
Sbjct: 71 RKHVEDERYVVGVCL 85
>d1kz1a_ c.16.1.1 (A:) Lumazine synthase {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 150
Score = 24.9 bits (54), Expect = 9.8
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 8/34 (23%)
Query: 214 VQNYEQALERVDEVMNRIEAILIENNKGNETSIA 247
V N EQAL R + +N GN+ A
Sbjct: 116 VLNEEQALYRAG--------LNGGHNHGNDWGSA 141
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.415
Gapped
Lambda K H
0.267 0.0513 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,229,011
Number of extensions: 58207
Number of successful extensions: 207
Number of sequences better than 10.0: 1
Number of HSP's gapped: 197
Number of HSP's successfully gapped: 41
Length of query: 322
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 237
Effective length of database: 1,240,546
Effective search space: 294009402
Effective search space used: 294009402
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.7 bits)