RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17289
(336 letters)
>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-5 [TaxId: 123217]}
Length = 85
Score = 58.8 bits (142), Expect = 6e-12
Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
+ + ++N+ EQ + F+E+NP +P + D ++ +S+ I+ Y+ +
Sbjct: 18 LLAKMIGVELDLKVLNIMEGEQLKPDFVELNPQHCIPTMDDHGLVLWESRVILSYLVSAY 77
Query: 61 SNGYKRLLP 69
+ L P
Sbjct: 78 GKD-ENLYP 85
>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-3 [TaxId: 123217]}
Length = 84
Score = 56.9 bits (137), Expect = 2e-11
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
MT + L NL + E + FL++NP +P LVD + +S+ I Y+ + +
Sbjct: 17 MTAAAVGVELNLKLTNLMAGEHMKPEFLKINPQHCIPTLVDNGFALWESRAICTYLAEKY 76
Query: 61 SNGYKRLLP 69
+L P
Sbjct: 77 GKD-DKLYP 84
>d1axda2 c.47.1.5 (A:1-80) Class phi GST {Maize (Zea mays), type I
[TaxId: 4577]}
Length = 80
Score = 53.4 bits (128), Expect = 4e-10
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
L E +++ +N A+ E L NP G+VP L DG + +S+ I +Y
Sbjct: 19 TALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAARKN 78
>d1e6ba2 c.47.1.5 (A:8-87) Class zeta GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 51.1 bits (122), Expect = 3e-09
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
+ L K L+++ VNL +Q++S F ++NP+G VP LVDG +I DS II Y+++ +
Sbjct: 18 IALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPALVDGDVVINDSFAIIMYLDEKY 77
>d1fw1a2 c.47.1.5 (A:5-87) Class zeta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 83
Score = 50.0 bits (119), Expect = 7e-09
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MTLHEKKLNFKTHLVNLASNE--QYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVED 58
+ L K +++KT +NL + Q+ F +NP+ +VP L I S II+Y+E+
Sbjct: 18 IALALKGIDYKTVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDGITIHQSLAIIEYLEE 77
Query: 59 NF 60
Sbjct: 78 TR 79
>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type
III [TaxId: 4577]}
Length = 81
Score = 48.5 bits (115), Expect = 2e-08
Identities = 20/62 (32%), Positives = 39/62 (62%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
L+EK L+F+ V+L + + FL +NP G++P LVDG +++ +S+ I +Y+ +
Sbjct: 19 TVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKY 78
Query: 61 SN 62
++
Sbjct: 79 AS 80
>d1gnwa2 c.47.1.5 (A:2-85) Class phi GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 84
Score = 48.5 bits (115), Expect = 2e-08
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
+ LHEK L+F+ V L E + FL NP G+VP DG + +S+ I QY+ +
Sbjct: 18 IALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRY 77
Query: 61 SNGYKRL 67
N L
Sbjct: 78 ENQGTNL 84
>d2c4ja2 c.47.1.5 (A:2-85) Class mu GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 84
Score = 45.8 bits (108), Expect = 2e-07
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 6/66 (9%)
Query: 1 MTLHEKKLNFKTHLVNLAS------NEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQ 54
+ L +++ + ++ F +P L+DG I S I++
Sbjct: 18 LLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNAILR 77
Query: 55 YVEDNF 60
Y+
Sbjct: 78 YIARKH 83
>d1f2ea2 c.47.1.5 (A:1-80) Class beta GST {Sphingomonas
paucimobilis [TaxId: 13689]}
Length = 80
Score = 45.0 bits (106), Expect = 4e-07
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 1 MTLHEKKLNFKTHLVNLASN-EQYESWFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVED 58
+ L E +F+ V+LA + FL VNP G+VP L D + + ++ I+ Y+ D
Sbjct: 16 IALRETGADFEAVKVDLAVRKTEAGEDFLTVNPSGKVPALTLDSGETLTENPAILLYIAD 75
Query: 59 NF 60
Sbjct: 76 QN 77
>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-6 [TaxId: 123217]}
Length = 83
Score = 44.7 bits (105), Expect = 6e-07
Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
+ + + N+ + + ++NP +P LVD ++ +S I+ Y+ + +
Sbjct: 17 LLAKKLGITLNLKKTNVHDPVERD-ALTKLNPQHTIPTLVDNGHVVWESYAIVLYLVETY 75
Query: 61 SNGYKRLLP 69
+ L P
Sbjct: 76 AKD-DTLYP 83
>d1ljra2 c.47.1.5 (A:1-79) Class theta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 79
Score = 43.5 bits (102), Expect = 1e-06
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
+ + + + V+L + FL++N LG++P L DG I+ +S I+ Y+ +
Sbjct: 19 IFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKY 78
>d1n2aa2 c.47.1.5 (A:1-80) Class beta GST {Escherichia coli
[TaxId: 562]}
Length = 80
Score = 42.2 bits (99), Expect = 4e-06
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 1 MTLHEKKLNFKTHLVNLASNE-QYESWFLEVNPLGEVPVLVDG-VKIIPDSKRIIQYVED 58
+TL E +F V+L + + VNP G+VP L+ ++ + I+QY+ D
Sbjct: 16 ITLRESGKDFTLVSVDLMKKRLENGDDYFAVNPKGQVPALLLDDGTLLTEGVAIMQYLAD 75
Query: 59 NF 60
+
Sbjct: 76 SV 77
>d1k0ma2 c.47.1.5 (A:6-91) Chloride intracellular channel 1
(clic1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 86
Score = 42.0 bits (98), Expect = 5e-06
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
M L K + F V+ + ++ P GE+P L+ G ++ D+ +I +++E
Sbjct: 27 MVLWLKGVTFNVTTVDTKRRTE---TVQKLCPGGELPFLLYGTEVHTDTNKIEEFLEAVL 83
>d1pmta2 c.47.1.5 (A:1-80) Class beta GST {Proteus mirabilis
[TaxId: 584]}
Length = 80
Score = 41.5 bits (97), Expect = 6e-06
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYES-WFLEVNPLGEVPVLV-DGVKIIPDSKRIIQYVED 58
+ L E L+F ++L + + FL +NP G+VPVL D I+ + I+QY+ D
Sbjct: 16 IVLRETGLDFSIERIDLRTKKTESGKDFLAINPKGQVPVLQLDNGDILTEGVAIVQYLAD 75
Query: 59 NF 60
Sbjct: 76 LK 77
>d1gula2 c.47.1.5 (A:4-80) Class alpha GST {Human (Homo sapiens),
(a1-1) [TaxId: 9606]}
Length = 77
Score = 40.1 bits (93), Expect = 2e-05
Identities = 7/61 (11%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
L + F + +VP++ + ++ I+ Y+ D
Sbjct: 18 WVLAAAGVEFDEEFLETKEQLYKLQDGN-HLLFQQVPMVEIDGMKLVQTRSILHYIADKH 76
Query: 61 S 61
+
Sbjct: 77 N 77
>d1nhya2 c.47.1.5 (A:1-75) GST-like domain of elongation factor
1-gamma {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 75
Score = 39.2 bits (91), Expect = 4e-05
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Query: 3 LHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVK-IIPDSKRIIQYVED 58
+ + V + + + F PL +VP V + ++ I Y+
Sbjct: 16 VPRGLVKALKLDVKVVTPDAAAEQFARDFPLKKVPAFVGPKGYKLTEAMAINYYLVK 72
>d2a2ra2 c.47.1.5 (A:1-77) Class pi GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 77
Score = 38.5 bits (89), Expect = 7e-05
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
M L ++ ++K +V + E G++P DG + S I++++
Sbjct: 19 MLLADQGQSWKEEVVTV--ETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLGRTL 76
>d1oyja2 c.47.1.5 (A:2-85) Class tau GST {Rice (Oryza sativa)
[TaxId: 4530]}
Length = 84
Score = 38.5 bits (89), Expect = 8e-05
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
+ + EK L F+ +L + + ++PVL+ + + +S I+QY++D F
Sbjct: 22 IAMAEKGLEFEYREEDLG--NKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAF 79
>d1k3ya2 c.47.1.5 (A:2-80) Class alpha GST {Human (Homo sapiens),
(a1-1) [TaxId: 9606]}
Length = 79
Score = 38.0 bits (88), Expect = 1e-04
Identities = 7/60 (11%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
L + F+ + A + + +VP++ + ++ I+ Y+ +
Sbjct: 20 WLLAAAGVEFEEKFIKSAED-LDKLRNDGYLMFQQVPMVEIDGMKLVQTRAILNYIASKY 78
>d1b48a2 c.47.1.5 (A:2-79) Class alpha GST {Mouse (Mus musculus),
(a1-4) [TaxId: 10090]}
Length = 78
Score = 37.7 bits (87), Expect = 1e-04
Identities = 7/60 (11%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
L + F+ + + + G+VP++ ++ ++ I+ Y+ +
Sbjct: 20 WLLAAAGVEFEEEFLETREQYE-KMQKDGHLLFGQVPLVEIDGMMLTQTRAILSYLAAKY 78
>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli
[TaxId: 562]}
Length = 75
Score = 36.3 bits (83), Expect = 4e-04
Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 20 NEQYESWFLEVNPLGEVPVLVDGV-KIIPDSKRIIQYVEDNF 60
+ +VP+L + +P+S I+ YV+
Sbjct: 32 LNDDAETPTRMVGQKQVPILQKDDSRYMPESMDIVHYVDKLD 73
>d1k0da2 c.47.1.5 (A:109-200) Yeast prion protein ure2p, nitrogen
regulation fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 92
Score = 36.7 bits (84), Expect = 5e-04
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV---DGVKIIPDSKRIIQYVE 57
+ L E ++ T ++ E F+ VNP VP L+ I +S I+ ++
Sbjct: 22 IVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPNARVPALIDHGMDNLSIWESGAILLHLV 81
Query: 58 DNF 60
+ +
Sbjct: 82 NKY 84
>d1eema2 c.47.1.5 (A:5-102) Class omega GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 36.5 bits (84), Expect = 5e-04
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGV-KIIPDSKRIIQYVEDN 59
+ L K + + +N + WF + NP G VPVL + ++I +S +Y+++
Sbjct: 36 LVLKAKGIRHEVININ---LKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCEYLDEA 92
Query: 60 F 60
+
Sbjct: 93 Y 93
>d2fnoa2 c.47.1.5 (A:1-87) Hypothetical protein
AGR_pAT_752p/Atu5508 {Agrobacterium tumefaciens [TaxId:
358]}
Length = 87
Score = 36.3 bits (83), Expect = 6e-04
Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 2/62 (3%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLV--DGVKIIPDSKRIIQYVED 58
L ++ H V+ + PVL+ + I I Y+ +
Sbjct: 24 GILAHCGCSWDEHDVDAIEGLMDCGAEKQPVAFMGPPVLIDRERNFAISQMPAIAIYLGE 83
Query: 59 NF 60
Sbjct: 84 RL 85
>d1fhea2 c.47.1.5 (A:1-80) Class alpha GST {Fasciola hepatica
[TaxId: 6192]}
Length = 80
Score = 35.4 bits (81), Expect = 0.001
Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYES-WFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDN 59
+ L ++ HL E++ S F L +P +D + S I++Y+ D
Sbjct: 18 LFLEYLGEEYEEHLYGRDDREKWMSEKFNMGLDLPNLPYYIDDKCKLTQSVAIMRYIADK 77
Query: 60 F 60
Sbjct: 78 H 78
>d1gwca2 c.47.1.5 (A:4-86) Class tau GST {Aegilops tauschii, also
known as Triticum tauschii [TaxId: 37682]}
Length = 83
Score = 34.7 bits (79), Expect = 0.002
Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLG-EVPVLVDGVKIIPDSKRIIQYVEDN 59
+ L K L+++ + + L+ NP+ ++PVL+ + +S I+QY+++
Sbjct: 20 LALALKGLSYEDVEED---LYKKSELLLKSNPVHKKIPVLIHNGAPVCESMIILQYIDEV 76
Query: 60 FSN 62
F++
Sbjct: 77 FAS 79
>d1tu7a2 c.47.1.5 (A:1-77) Class pi GST {Onchocerca volvulus
[TaxId: 6282]}
Length = 77
Score = 33.0 bits (75), Expect = 0.007
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNPLGEVPVLVDGVKIIPDSKRIIQYVEDNF 60
+ L ++ + F + S G++P L DG + I S I++++ +
Sbjct: 19 LFLVDQDIKFIDD----RIAKDDFSSIKSQFQFGQLPCLYDGDQQIVQSGAILRHLARKY 74
>d1okta2 c.47.1.5 (A:1-85) Pf GST {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 85
Score = 30.5 bits (68), Expect = 0.051
Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Query: 1 MTLHEKKLNFKTHLVNLASNEQYESWFLEVNP---LGEVPVLVDGVKIIPDSKRIIQYVE 57
+ + + + + E + +VP+L G I+ S+ I++Y+
Sbjct: 21 LIFAYLGIEYTDKRFGVNGDAFVEFKNFKKEKDTPFEQVPILQIGDLILAQSQAIVRYLS 80
Query: 58 DNF 60
+
Sbjct: 81 KKY 83
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 30.4 bits (67), Expect = 0.27
Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 8/138 (5%)
Query: 105 LNPKSPFLPSNRAFMMDNQSRKPQVI---RKAADVNPSISDILLDKA---TRQEQFNKEL 158
L+P + N A + Q I R+A ++ P D + A + +
Sbjct: 232 LSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAE 291
Query: 159 NNVQNYEQALERVDEVMNRIEAILIENNKDNQSRKPQVIRKAADVNPSISDILLDKATRQ 218
+ + + +N + I E ++ + + RKA +V P + + A+
Sbjct: 292 DCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR--LYRKALEVFPEFAAAHSNLASVL 349
Query: 219 EQFNKELNNVQNYEQALE 236
+Q K + +Y++A+
Sbjct: 350 QQQGKLQEALMHYKEAIR 367
>d1tjla1 a.2.14.1 (A:7-110) DnaK suppressor protein DksA,
alpha-hairpin domain {Escherichia coli [TaxId: 562]}
Length = 104
Score = 27.1 bits (60), Expect = 1.0
Identities = 12/61 (19%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 119 MMDNQSRKPQVIRKAADVNPSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRI 178
+ D R + D + D + D+A ++E+F+ EL N + ++++++ + ++
Sbjct: 45 LRDEVDRT---VTHMQDEAANFPDPV-DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKV 100
Query: 179 E 179
E
Sbjct: 101 E 101
Score = 27.1 bits (60), Expect = 1.1
Identities = 10/52 (19%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 195 QVIRKAADVNPSISDILLDKATRQEQFNKELNNVQNYEQALERVDEVMNRIE 246
+ + D + D + D+A ++E+F+ EL N + ++++++ + ++E
Sbjct: 51 RTVTHMQDEAANFPDPV-DRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVE 101
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima
[TaxId: 2336]}
Length = 429
Score = 28.7 bits (63), Expect = 1.2
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 128 QVIRKAADVNPSISDILL-DKATRQEQFNKELNNVQNYEQALERVDEVMNRIE 179
+ K + + LL D+ ++ +EL + + L+ VD + R E
Sbjct: 376 RNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFDISYYLKHVDHIFERFE 428
Score = 28.7 bits (63), Expect = 1.2
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 195 QVIRKAADVNPSISDILL-DKATRQEQFNKELNNVQNYEQALERVDEVMNRIE 246
+ K + + LL D+ ++ +EL + + L+ VD + R E
Sbjct: 376 RNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFDISYYLKHVDHIFERFE 428
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS)
{Staphylococcus aureus [TaxId: 1280]}
Length = 323
Score = 27.0 bits (59), Expect = 3.6
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 269 HYVRILPLLSCHLQKKAHNQHFFVVNFGYFIRNPSQK 305
H + L L Q+ H + I +PS K
Sbjct: 49 HLLPFLTLR--RFQEHGHRPIVLIGGGTGMIGDPSGK 83
>d1hf2a2 c.102.1.1 (A:1-99) Cell-division inhibitor MinC, N-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 99
Score = 25.2 bits (55), Expect = 4.9
Identities = 11/64 (17%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 161 VQNYEQALERVDEVMNRIEAI------------LIENNKDNQSRKPQVIRKAADVNPSIS 208
+++Y+ E ++ + RI + +IEN+ + P+++ ++ +S
Sbjct: 15 IKDYQNLEEVLNAISARITQMGGFFAKGDRISLMIENHNKHSQDIPRIVSHLRNLGLEVS 74
Query: 209 DILL 212
IL+
Sbjct: 75 QILV 78
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB
{Bordetella pertussis [TaxId: 520]}
Length = 68
Score = 24.2 bits (53), Expect = 6.1
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 162 QNYEQALERVDEVMNRIEA 180
Q++E AL ++ +++ +E
Sbjct: 6 QDFETALAELESLVSAMEN 24
Score = 24.2 bits (53), Expect = 6.1
Identities = 5/19 (26%), Positives = 13/19 (68%)
Query: 229 QNYEQALERVDEVMNRIEA 247
Q++E AL ++ +++ +E
Sbjct: 6 QDFETALAELESLVSAMEN 24
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of
imidazoleglycerolphosphate synthase HisF {Thermotoga
maritima [TaxId: 2336]}
Length = 200
Score = 25.7 bits (55), Expect = 6.6
Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 227 NVQNYEQALERVDEVMNRIEAILIENNKGNETSIAIKLGGRAHYVRILPLLSCHLQKKAH 286
N+ N + ++R E + L+E+ + N+ + + G H+ + L +
Sbjct: 12 NIMNLYRGVKRASENFEDVSIELVESPR-NDLYDLLFIPGVGHFGEGMRRLRENDLIDFV 70
Query: 287 NQHFFVVNFGYFIRN 301
+H + +
Sbjct: 71 RKHVEDERYVVGVCL 85
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.392
Gapped
Lambda K H
0.267 0.0590 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,260,409
Number of extensions: 60712
Number of successful extensions: 254
Number of sequences better than 10.0: 1
Number of HSP's gapped: 249
Number of HSP's successfully gapped: 52
Length of query: 336
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 250
Effective length of database: 1,226,816
Effective search space: 306704000
Effective search space used: 306704000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.5 bits)