Query psy1729
Match_columns 170
No_of_seqs 142 out of 1413
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 18:12:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1729.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1729hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gzk_A Sex-determining region 99.8 7.9E-20 2.7E-24 142.1 9.9 87 5-91 24-158 (159)
2 2yrq_A High mobility group pro 99.8 1.8E-19 6.3E-24 142.1 10.0 89 4-92 34-172 (173)
3 3tq6_A Transcription factor A, 99.8 4.7E-19 1.6E-23 145.2 10.6 90 4-93 28-182 (214)
4 3tmm_A Transcription factor A, 99.8 5.1E-19 1.8E-23 147.0 10.0 90 4-93 60-214 (238)
5 1l8y_A Upstream binding factor 99.2 2.2E-11 7.6E-16 88.4 6.1 65 31-95 8-77 (91)
6 2crj_A SWI/SNF-related matrix- 99.1 1.8E-10 6.2E-15 82.3 6.9 66 34-99 14-85 (92)
7 1v63_A Nucleolar transcription 99.1 3.6E-10 1.2E-14 82.5 7.5 44 51-94 36-79 (101)
8 1ckt_A High mobility group 1 p 99.1 1E-10 3.6E-15 79.1 4.3 48 4-51 20-69 (71)
9 2cs1_A PMS1 protein homolog 1; 99.0 2.1E-10 7E-15 82.0 5.3 46 5-50 27-72 (92)
10 2eqz_A High mobility group pro 99.0 3.6E-10 1.2E-14 79.7 5.5 47 5-51 35-83 (86)
11 1k99_A Upstream binding factor 99.0 2.5E-10 8.6E-15 82.9 4.8 49 4-52 29-77 (99)
12 1gt0_D Transcription factor SO 99.0 4.5E-10 1.6E-14 77.8 5.7 48 4-51 21-68 (80)
13 1l8y_A Upstream binding factor 99.0 3.3E-10 1.1E-14 82.3 5.2 50 5-55 24-73 (91)
14 1hme_A High mobility group pro 99.0 3.1E-10 1.1E-14 78.0 4.6 48 4-51 25-72 (77)
15 4a3n_A Transcription factor SO 99.0 3.1E-10 1.1E-14 76.5 4.4 47 4-50 21-67 (71)
16 1v63_A Nucleolar transcription 99.0 9.9E-10 3.4E-14 80.2 7.0 64 5-74 26-89 (101)
17 2crj_A SWI/SNF-related matrix- 99.0 6.4E-10 2.2E-14 79.4 5.8 51 4-54 26-76 (92)
18 3fgh_A Transcription factor A, 99.0 4.8E-10 1.6E-14 75.4 4.7 39 51-89 28-66 (67)
19 1hry_A Human SRY; DNA, DNA-bin 99.0 4E-10 1.4E-14 77.3 4.3 47 4-50 23-69 (76)
20 2lef_A LEF-1 HMG, protein (lym 99.0 7.4E-10 2.5E-14 77.9 5.6 45 51-95 32-76 (86)
21 2cs1_A PMS1 protein homolog 1; 99.0 9.9E-10 3.4E-14 78.4 6.1 60 34-93 14-79 (92)
22 1j46_A SRY, sex-determining re 99.0 8E-10 2.7E-14 77.7 5.5 47 4-50 23-69 (85)
23 2co9_A Thymus high mobility gr 99.0 1E-09 3.6E-14 79.8 6.3 44 51-94 47-90 (102)
24 2eqz_A High mobility group pro 98.9 2.3E-09 7.9E-14 75.5 7.3 57 34-90 22-86 (86)
25 3u2b_C Transcription factor SO 98.9 8.8E-10 3E-14 75.9 5.0 47 4-50 21-67 (79)
26 3nm9_A HMG-D, high mobility gr 98.9 6E-10 2.1E-14 76.2 4.1 39 51-91 33-71 (73)
27 1wgf_A Upstream binding factor 98.9 2.9E-10 1E-14 81.0 2.5 48 4-51 39-86 (90)
28 1ckt_A High mobility group 1 p 98.9 1.3E-09 4.5E-14 73.6 5.5 40 50-89 32-71 (71)
29 3f27_D Transcription factor SO 98.9 9E-10 3.1E-14 76.7 4.7 47 4-50 25-71 (83)
30 2lef_A LEF-1 HMG, protein (lym 98.9 6E-10 2.1E-14 78.4 3.6 42 11-52 28-69 (86)
31 1wz6_A HMG-box transcription f 98.9 5.8E-10 2E-14 77.7 3.2 47 4-50 26-72 (82)
32 1wxl_A Single-strand recogniti 98.9 1.2E-09 4E-14 74.7 4.7 48 4-53 22-69 (73)
33 1cg7_A Protein (NON histone pr 98.9 5.5E-10 1.9E-14 80.0 3.1 48 5-52 40-87 (93)
34 1aab_A High mobility group pro 98.9 5.5E-10 1.9E-14 78.0 3.0 41 51-91 39-79 (83)
35 2co9_A Thymus high mobility gr 98.9 2.7E-09 9.3E-14 77.6 6.7 44 11-54 43-86 (102)
36 1i11_A Transcription factor SO 98.9 1.5E-09 5.2E-14 75.4 4.7 47 4-50 23-69 (81)
37 2e6o_A HMG box-containing prot 98.9 1.5E-09 5.3E-14 76.6 4.7 47 4-50 36-82 (87)
38 4euw_A Transcription factor SO 98.9 2.4E-09 8.2E-14 78.6 5.5 45 5-49 49-93 (106)
39 1aab_A High mobility group pro 98.9 5.8E-10 2E-14 77.9 2.1 51 4-54 26-78 (83)
40 1hme_A High mobility group pro 98.9 2E-09 6.7E-14 73.9 4.3 41 51-91 36-76 (77)
41 3nm9_A HMG-D, high mobility gr 98.8 5.2E-09 1.8E-13 71.4 6.3 42 11-54 29-70 (73)
42 1k99_A Upstream binding factor 98.8 2.9E-09 1E-13 77.3 5.0 59 34-92 17-81 (99)
43 1gt0_D Transcription factor SO 98.8 3E-09 1E-13 73.7 4.3 43 51-93 32-74 (80)
44 2gzk_A Sex-determining region 98.8 4E-09 1.4E-13 81.4 5.5 50 4-53 107-156 (159)
45 2lhj_A High mobility group pro 98.8 9.6E-10 3.3E-14 79.2 1.7 46 5-50 42-89 (97)
46 1hry_A Human SRY; DNA, DNA-bin 98.8 4.2E-09 1.4E-13 72.1 4.6 57 35-91 12-74 (76)
47 3fgh_A Transcription factor A, 98.8 5.5E-09 1.9E-13 70.1 5.0 40 12-51 25-64 (67)
48 1v64_A Nucleolar transcription 98.8 4.1E-09 1.4E-13 77.8 4.7 45 50-94 42-86 (108)
49 4a3n_A Transcription factor SO 98.8 3.2E-09 1.1E-13 71.4 3.5 40 51-90 32-71 (71)
50 1cg7_A Protein (NON histone pr 98.8 2.5E-09 8.5E-14 76.5 2.8 43 51-93 50-92 (93)
51 1j46_A SRY, sex-determining re 98.8 7.2E-09 2.4E-13 72.8 4.8 43 51-93 34-76 (85)
52 1wz6_A HMG-box transcription f 98.8 2.5E-09 8.6E-14 74.5 2.3 59 35-93 15-79 (82)
53 2lhj_A High mobility group pro 98.7 3.2E-09 1.1E-13 76.4 2.7 42 51-92 54-95 (97)
54 1v64_A Nucleolar transcription 98.7 1.8E-08 6.3E-13 74.3 6.4 46 10-55 38-83 (108)
55 3f27_D Transcription factor SO 98.7 8.6E-09 2.9E-13 71.7 4.2 43 51-93 36-78 (83)
56 2yrq_A High mobility group pro 98.7 1.3E-08 4.5E-13 79.8 5.3 51 4-54 120-170 (173)
57 4euw_A Transcription factor SO 98.7 1.4E-08 4.9E-13 74.4 4.9 59 34-92 36-100 (106)
58 3u2b_C Transcription factor SO 98.7 8.6E-09 3E-13 70.9 3.4 43 51-93 32-74 (79)
59 1wxl_A Single-strand recogniti 98.7 1.5E-08 5.3E-13 69.1 4.3 57 34-92 10-72 (73)
60 2d7l_A WD repeat and HMG-box D 98.7 1E-08 3.5E-13 72.3 3.1 40 4-43 24-64 (81)
61 2e6o_A HMG box-containing prot 98.7 1.3E-08 4.3E-13 71.9 3.4 57 34-90 24-86 (87)
62 1i11_A Transcription factor SO 98.6 1.6E-08 5.3E-13 70.2 2.8 41 51-91 34-74 (81)
63 2cto_A Novel protein; high mob 98.5 2.6E-08 9.1E-13 72.2 1.7 41 10-50 33-76 (93)
64 3tq6_A Transcription factor A, 98.4 3.4E-07 1.2E-11 74.6 6.9 58 35-92 17-80 (214)
65 3tmm_A Transcription factor A, 98.4 3.4E-07 1.2E-11 75.7 6.9 59 34-92 48-112 (238)
66 1wgf_A Upstream binding factor 98.4 4E-08 1.4E-12 69.8 1.1 55 34-88 27-87 (90)
67 2cto_A Novel protein; high mob 98.4 1.1E-07 3.7E-12 68.9 2.3 36 51-86 38-76 (93)
68 2yuk_A Myeloid/lymphoid or mix 98.3 3E-07 1E-11 66.4 2.6 41 4-48 41-83 (90)
69 2d7l_A WD repeat and HMG-box D 97.8 1.2E-05 4E-10 56.5 3.2 45 34-78 12-63 (81)
70 2yuk_A Myeloid/lymphoid or mix 97.7 2.6E-05 9E-10 56.1 4.0 51 35-85 30-84 (90)
71 1zu1_A DSRBP-ZFA, RNA binding 96.8 0.00011 3.8E-09 55.2 -1.3 36 129-164 88-123 (127)
72 1zr9_A Zinc finger protein 593 96.2 0.00052 1.8E-08 52.1 -1.2 41 124-164 40-80 (124)
73 1zu1_A DSRBP-ZFA, RNA binding 94.8 0.002 6.9E-08 48.2 -2.1 33 132-164 30-62 (127)
74 3cw1_L U1 small nuclear ribonu 93.8 0.0083 2.8E-07 42.0 -0.7 31 135-165 4-36 (77)
75 2lvu_A Zinc finger and BTB dom 90.4 0.042 1.4E-06 27.9 0.0 20 136-155 4-23 (26)
76 2lvt_A Zinc finger and BTB dom 88.7 0.074 2.5E-06 27.5 0.0 20 136-155 4-23 (29)
77 2yrk_A Zinc finger homeobox pr 87.9 0.053 1.8E-06 35.6 -1.3 30 135-164 14-43 (55)
78 2lvr_A Zinc finger and BTB dom 87.5 0.11 3.6E-06 26.8 0.0 21 135-155 4-24 (30)
79 1ard_A Yeast transcription fac 86.4 0.057 1.9E-06 27.6 -1.5 20 136-155 4-23 (29)
80 2kfq_A FP1; protein, de novo p 86.4 0.064 2.2E-06 29.0 -1.4 20 136-155 4-23 (32)
81 2kvg_A Zinc finger and BTB dom 86.2 0.058 2E-06 27.8 -1.6 20 136-155 5-24 (27)
82 2kvf_A Zinc finger and BTB dom 86.1 0.044 1.5E-06 28.1 -2.1 20 136-155 5-24 (28)
83 4dgw_A PRE-mRNA-splicing facto 85.5 0.08 2.7E-06 47.1 -2.0 36 130-165 288-323 (402)
84 2m0f_A Zinc finger and BTB dom 84.8 0.072 2.5E-06 27.1 -1.6 20 136-155 4-23 (29)
85 2elo_A Zinc finger protein 406 84.1 0.091 3.1E-06 28.8 -1.5 21 135-155 10-30 (37)
86 1znf_A 31ST zinc finger from X 83.8 0.073 2.5E-06 26.9 -1.9 19 137-155 4-22 (27)
87 2m0d_A Zinc finger and BTB dom 83.4 0.088 3E-06 26.9 -1.7 20 136-155 5-24 (30)
88 1fv5_A First zinc finger of U- 82.9 0.11 3.7E-06 30.5 -1.5 19 136-154 10-28 (36)
89 2kvh_A Zinc finger and BTB dom 82.9 0.077 2.6E-06 27.1 -2.0 20 136-155 5-24 (27)
90 2elx_A Zinc finger protein 406 82.7 0.08 2.8E-06 28.5 -2.1 21 135-155 8-28 (35)
91 1rim_A E6APC2 peptide; E6-bind 82.7 0.086 2.9E-06 28.7 -2.0 20 136-155 4-23 (33)
92 2elq_A Zinc finger protein 406 81.6 0.096 3.3E-06 28.6 -2.1 21 135-155 10-30 (36)
93 1rik_A E6APC1 peptide; E6-bind 81.0 0.093 3.2E-06 26.9 -2.2 20 136-155 4-23 (29)
94 2els_A Zinc finger protein 406 81.0 0.13 4.5E-06 28.0 -1.6 21 135-155 10-30 (36)
95 1njq_A Superman protein; zinc- 80.9 0.13 4.5E-06 28.7 -1.6 21 135-155 7-27 (39)
96 1srk_A Zinc finger protein ZFP 80.9 0.1 3.5E-06 28.2 -2.1 21 135-155 8-28 (35)
97 2elv_A Zinc finger protein 406 80.8 0.11 3.6E-06 28.4 -2.1 21 135-155 10-30 (36)
98 2elr_A Zinc finger protein 406 80.6 0.14 4.9E-06 27.7 -1.5 21 135-155 10-30 (36)
99 2ytb_A Zinc finger protein 32; 80.5 0.18 6E-06 28.4 -1.2 21 135-155 12-32 (42)
100 2elt_A Zinc finger protein 406 80.3 0.11 3.9E-06 28.1 -2.0 21 135-155 10-30 (36)
101 2m0e_A Zinc finger and BTB dom 80.2 0.12 3.9E-06 26.2 -1.9 19 137-155 5-23 (29)
102 1p7a_A BF3, BKLF, kruppel-like 79.6 0.18 6.1E-06 27.5 -1.4 21 135-155 12-32 (37)
103 2elp_A Zinc finger protein 406 79.3 0.12 4.2E-06 28.3 -2.1 21 135-155 10-31 (37)
104 2yte_A Zinc finger protein 473 78.3 0.19 6.6E-06 28.2 -1.5 21 135-155 11-31 (42)
105 1paa_A Yeast transcription fac 78.3 0.18 6E-06 26.0 -1.6 19 136-154 4-22 (30)
106 2eq4_A Zinc finger protein 224 78.1 0.22 7.5E-06 28.6 -1.4 21 135-155 13-33 (46)
107 2emg_A Zinc finger protein 484 78.0 0.21 7E-06 28.8 -1.5 21 135-155 13-33 (46)
108 2en2_A B-cell lymphoma 6 prote 78.0 0.19 6.5E-06 28.3 -1.6 21 135-155 12-32 (42)
109 4f9c_B Protein DBF4 homolog A; 77.7 0.23 7.9E-06 38.1 -1.7 29 134-165 87-115 (144)
110 2eoj_A Zinc finger protein 268 77.7 0.22 7.4E-06 28.4 -1.5 21 135-155 13-33 (44)
111 1klr_A Zinc finger Y-chromosom 77.6 0.15 5.1E-06 26.0 -2.0 20 136-155 4-23 (30)
112 2eou_A Zinc finger protein 473 77.3 0.22 7.4E-06 28.5 -1.5 21 135-155 13-33 (44)
113 2epu_A Zinc finger protein 32; 77.3 0.21 7.3E-06 28.7 -1.6 21 135-155 13-33 (45)
114 2enh_A Zinc finger protein 28 77.2 0.24 8.1E-06 28.6 -1.4 21 135-155 13-33 (46)
115 2eox_A Zinc finger protein 473 77.1 0.2 7E-06 28.6 -1.7 21 135-155 13-33 (44)
116 2epz_A Zinc finger protein 28 76.9 0.24 8.1E-06 28.6 -1.5 21 135-155 13-33 (46)
117 2eof_A Zinc finger protein 268 76.9 0.21 7.2E-06 28.3 -1.7 21 135-155 13-33 (44)
118 2en7_A Zinc finger protein 268 76.7 0.23 7.9E-06 28.2 -1.5 21 135-155 13-33 (44)
119 2eor_A Zinc finger protein 224 76.1 0.23 8E-06 28.5 -1.6 21 135-155 13-33 (46)
120 3iuf_A Zinc finger protein UBI 76.1 0.24 8.1E-06 29.4 -1.6 30 135-165 8-37 (48)
121 2eon_A ZFP-95, zinc finger pro 76.0 0.2 6.8E-06 29.1 -2.0 21 135-155 13-33 (46)
122 2el5_A Zinc finger protein 268 75.6 0.2 7E-06 28.2 -2.0 21 135-155 11-31 (42)
123 2eos_A B-cell lymphoma 6 prote 75.6 0.21 7.2E-06 28.2 -1.9 21 135-155 12-32 (42)
124 2epc_A Zinc finger protein 32; 75.6 0.19 6.6E-06 28.2 -2.1 21 135-155 12-32 (42)
125 2yrm_A B-cell lymphoma 6 prote 75.5 0.21 7.3E-06 28.6 -1.9 21 135-155 11-31 (43)
126 2eq1_A Zinc finger protein 347 75.3 0.3 1E-05 28.1 -1.3 21 135-155 13-33 (46)
127 2emb_A Zinc finger protein 473 75.3 0.27 9.4E-06 28.0 -1.5 21 135-155 13-33 (44)
128 2en9_A Zinc finger protein 28 75.3 0.27 9.1E-06 28.4 -1.5 21 135-155 13-33 (46)
129 1yui_A GAGA-factor; complex (D 75.2 0.26 9E-06 29.7 -1.6 21 135-155 25-45 (54)
130 2ytm_A Zinc finger protein 28 75.0 0.3 1E-05 28.2 -1.3 21 135-155 13-33 (46)
131 2yth_A Zinc finger protein 224 75.0 0.25 8.6E-06 28.5 -1.7 21 135-155 13-33 (46)
132 2eom_A ZFP-95, zinc finger pro 74.7 0.23 7.7E-06 28.8 -2.0 21 135-155 13-33 (46)
133 2ept_A Zinc finger protein 32; 74.4 0.24 8.2E-06 27.8 -1.9 21 135-155 11-31 (41)
134 2ytf_A Zinc finger protein 268 74.3 0.22 7.5E-06 28.6 -2.1 21 135-155 13-33 (46)
135 2eow_A Zinc finger protein 347 74.3 0.25 8.7E-06 28.3 -1.8 21 135-155 13-33 (46)
136 2eq3_A Zinc finger protein 347 74.1 0.3 1E-05 28.0 -1.5 21 135-155 13-33 (46)
137 2ysp_A Zinc finger protein 224 74.0 0.3 1E-05 28.1 -1.6 21 135-155 13-33 (46)
138 2eoz_A Zinc finger protein 473 74.0 0.3 1E-05 28.2 -1.6 21 135-155 13-33 (46)
139 2enf_A Zinc finger protein 347 74.0 0.24 8.2E-06 28.5 -2.0 21 135-155 13-33 (46)
140 2ep1_A Zinc finger protein 484 74.0 0.26 8.7E-06 28.3 -1.9 21 135-155 13-33 (46)
141 2emj_A Zinc finger protein 28 74.0 0.23 8E-06 28.7 -2.0 21 135-155 13-33 (46)
142 2ytp_A Zinc finger protein 484 74.0 0.23 7.9E-06 28.7 -2.1 21 135-155 13-33 (46)
143 2yrj_A Zinc finger protein 473 73.9 0.23 7.8E-06 28.5 -2.1 21 135-155 13-33 (46)
144 2ytr_A Zinc finger protein 347 73.5 0.31 1.1E-05 27.9 -1.5 21 135-155 13-33 (46)
145 2emi_A Zinc finger protein 484 73.5 0.25 8.6E-06 28.4 -2.0 21 135-155 13-33 (46)
146 4gzn_C ZFP-57, zinc finger pro 73.5 0.39 1.3E-05 30.8 -1.2 19 136-154 34-52 (60)
147 2eoy_A Zinc finger protein 473 73.5 0.23 7.8E-06 28.7 -2.2 21 135-155 13-33 (46)
148 2epv_A Zinc finger protein 268 73.4 0.25 8.7E-06 28.3 -2.0 21 135-155 13-33 (44)
149 2ytg_A ZFP-95, zinc finger pro 73.3 0.32 1.1E-05 28.0 -1.6 21 135-155 13-33 (46)
150 2em6_A Zinc finger protein 224 73.2 0.26 8.8E-06 28.5 -2.0 21 135-155 13-33 (46)
151 2eoh_A Zinc finger protein 28 73.0 0.26 9E-06 28.4 -2.0 21 135-155 13-33 (46)
152 2eme_A Zinc finger protein 473 72.9 0.31 1.1E-05 27.9 -1.7 21 135-155 13-33 (46)
153 2eq2_A Zinc finger protein 347 72.9 0.29 9.8E-06 28.2 -1.8 21 135-155 13-33 (46)
154 2emz_A ZFP-95, zinc finger pro 72.9 0.27 9.1E-06 28.4 -2.0 21 135-155 13-33 (46)
155 2en1_A Zinc finger protein 224 72.9 0.36 1.2E-05 27.7 -1.3 21 135-155 13-33 (46)
156 2ytn_A Zinc finger protein 347 72.8 0.37 1.3E-05 27.7 -1.3 21 135-155 13-33 (46)
157 2yso_A ZFP-95, zinc finger pro 72.8 0.32 1.1E-05 28.0 -1.6 21 135-155 13-33 (46)
158 1sp2_A SP1F2; zinc finger, tra 72.8 0.25 8.7E-06 25.8 -1.9 19 137-155 5-25 (31)
159 2eq0_A Zinc finger protein 347 72.7 0.32 1.1E-05 28.0 -1.6 21 135-155 13-33 (46)
160 2em9_A Zinc finger protein 224 72.6 0.29 9.8E-06 28.1 -1.9 21 135-155 13-33 (46)
161 2emx_A Zinc finger protein 268 72.6 0.26 9E-06 28.1 -2.0 21 135-155 11-31 (44)
162 2en6_A Zinc finger protein 268 72.6 0.34 1.1E-05 27.9 -1.6 21 135-155 13-33 (46)
163 2yti_A Zinc finger protein 347 72.6 0.27 9.3E-06 28.3 -2.0 21 135-155 13-33 (46)
164 2emm_A ZFP-95, zinc finger pro 72.5 0.26 8.8E-06 28.3 -2.1 21 135-155 13-33 (46)
165 2emh_A Zinc finger protein 484 72.5 0.32 1.1E-05 27.9 -1.6 24 135-160 13-36 (46)
166 2eoe_A Zinc finger protein 347 72.5 0.37 1.3E-05 27.6 -1.4 21 135-155 13-33 (46)
167 2emf_A Zinc finger protein 484 72.4 0.29 9.8E-06 28.3 -1.9 21 135-155 13-33 (46)
168 2em4_A Zinc finger protein 28 72.4 0.26 8.9E-06 28.4 -2.1 21 135-155 13-33 (46)
169 2ep0_A Zinc finger protein 28 72.3 0.26 9E-06 28.3 -2.1 21 135-155 13-33 (46)
170 2eop_A Zinc finger protein 268 72.2 0.36 1.2E-05 27.7 -1.5 21 135-155 13-33 (46)
171 2ely_A Zinc finger protein 224 71.9 0.29 1E-05 28.2 -1.9 21 135-155 13-33 (46)
172 2yts_A Zinc finger protein 484 71.9 0.3 1E-05 28.0 -1.9 21 135-155 13-33 (46)
173 2em2_A Zinc finger protein 28 71.7 0.28 9.5E-06 28.3 -2.1 21 135-155 13-33 (46)
174 2em0_A Zinc finger protein 224 71.6 0.33 1.1E-05 27.9 -1.8 21 135-155 13-33 (46)
175 2epr_A POZ-, at HOOK-, and zin 71.6 0.41 1.4E-05 28.0 -1.3 22 134-155 12-33 (48)
176 2emy_A Zinc finger protein 268 71.5 0.28 9.6E-06 28.2 -2.1 21 135-155 13-33 (46)
177 2en3_A ZFP-95, zinc finger pro 71.5 0.27 9.2E-06 28.3 -2.2 21 135-155 13-33 (46)
178 2em7_A Zinc finger protein 224 71.5 0.31 1.1E-05 28.0 -1.9 21 135-155 13-33 (46)
179 2em8_A Zinc finger protein 224 71.5 0.28 9.7E-06 28.3 -2.1 21 135-155 13-33 (46)
180 2em3_A Zinc finger protein 28 71.4 0.28 9.7E-06 28.2 -2.1 21 135-155 13-33 (46)
181 2elz_A Zinc finger protein 224 71.4 0.34 1.1E-05 27.9 -1.8 21 135-155 13-33 (46)
182 2ep3_A Zinc finger protein 484 71.3 0.29 9.8E-06 28.2 -2.1 21 135-155 13-33 (46)
183 2epq_A POZ-, at HOOK-, and zin 71.1 0.38 1.3E-05 27.5 -1.5 21 135-155 11-31 (45)
184 2ytj_A Zinc finger protein 484 71.0 0.29 1E-05 28.1 -2.1 21 135-155 13-33 (46)
185 2elm_A Zinc finger protein 406 70.9 0.28 9.4E-06 27.1 -2.1 19 135-153 10-28 (37)
186 2pfz_A Putative exported prote 70.8 11 0.00037 30.7 6.7 63 22-84 215-285 (301)
187 2en8_A Zinc finger protein 224 70.8 0.38 1.3E-05 27.5 -1.6 21 135-155 13-33 (46)
188 2ytt_A Zinc finger protein 473 70.8 0.32 1.1E-05 28.0 -1.9 21 135-155 13-33 (46)
189 2yu5_A Zinc finger protein 473 70.7 0.29 1E-05 27.9 -2.1 21 135-155 13-33 (44)
190 2eml_A Zinc finger protein 28 70.3 0.33 1.1E-05 27.9 -2.0 21 135-155 13-33 (46)
191 2em5_A ZFP-95, zinc finger pro 70.3 0.31 1.1E-05 28.1 -2.1 21 135-155 13-33 (46)
192 2ene_A Zinc finger protein 347 70.2 0.32 1.1E-05 28.0 -2.1 21 135-155 13-33 (46)
193 2eoo_A ZFP-95, zinc finger pro 70.1 0.32 1.1E-05 28.1 -2.1 21 135-155 13-33 (46)
194 2el4_A Zinc finger protein 268 69.9 0.37 1.3E-05 27.6 -1.8 21 135-155 13-33 (46)
195 2yto_A Zinc finger protein 484 69.7 0.33 1.1E-05 28.0 -2.1 21 135-155 13-33 (46)
196 2eoq_A Zinc finger protein 224 69.5 0.35 1.2E-05 27.8 -2.0 21 135-155 13-33 (46)
197 2ytq_A Zinc finger protein 268 69.4 0.35 1.2E-05 27.8 -2.0 21 135-155 13-33 (46)
198 2ep2_A Zinc finger protein 484 69.0 0.34 1.2E-05 27.8 -2.1 21 135-155 13-33 (46)
199 2epw_A Zinc finger protein 268 68.9 0.33 1.1E-05 27.8 -2.2 21 135-155 13-33 (46)
200 1zfd_A SWI5; DNA binding motif 68.7 0.35 1.2E-05 25.4 -2.0 19 137-155 6-26 (32)
201 2eov_A Zinc finger protein 484 68.7 0.37 1.3E-05 27.6 -2.0 21 135-155 13-33 (46)
202 2epx_A Zinc finger protein 28 68.3 0.39 1.3E-05 27.5 -1.9 21 135-155 13-33 (47)
203 2enc_A Zinc finger protein 224 67.6 0.38 1.3E-05 27.6 -2.1 21 135-155 13-33 (46)
204 2ema_A Zinc finger protein 347 67.6 0.39 1.3E-05 27.6 -2.1 21 135-155 13-33 (46)
205 2emk_A Zinc finger protein 28 67.6 0.4 1.4E-05 27.6 -2.0 21 135-155 13-33 (46)
206 2yu8_A Zinc finger protein 347 67.6 0.37 1.3E-05 27.7 -2.2 21 135-155 13-33 (46)
207 3uk3_C Zinc finger protein 217 67.5 0.51 1.8E-05 28.1 -1.6 20 136-155 6-25 (57)
208 2ab3_A ZNF29; zinc finger prot 67.5 0.37 1.3E-05 24.3 -2.0 20 136-155 4-25 (29)
209 2ytk_A Zinc finger protein 347 67.3 0.39 1.3E-05 27.6 -2.1 21 135-155 13-33 (46)
210 2el6_A Zinc finger protein 268 66.9 0.44 1.5E-05 27.4 -1.9 21 135-155 13-33 (46)
211 2emp_A Zinc finger protein 347 66.7 0.4 1.4E-05 27.5 -2.1 21 135-155 13-33 (46)
212 4gzn_C ZFP-57, zinc finger pro 65.8 0.58 2E-05 30.0 -1.6 20 136-155 6-25 (60)
213 2pfy_A Putative exported prote 65.2 11 0.00037 30.6 5.6 63 22-84 216-286 (301)
214 2ytd_A Zinc finger protein 473 65.1 0.46 1.6E-05 27.3 -2.1 21 135-155 13-33 (46)
215 2epp_A POZ-, at HOOK-, and zin 64.7 0.66 2.3E-05 30.6 -1.6 24 135-160 14-37 (66)
216 1bbo_A Human enhancer-binding 63.9 0.67 2.3E-05 27.5 -1.5 19 137-155 4-22 (57)
217 2lce_A B-cell lymphoma 6 prote 63.6 0.67 2.3E-05 29.3 -1.7 20 135-154 46-65 (74)
218 1llm_C Chimera of ZIF23-GCN4; 63.4 3.8 0.00013 26.6 2.1 24 133-156 57-80 (88)
219 2qgu_A Probable signal peptide 63.4 5.2 0.00018 31.8 3.2 40 53-92 79-119 (211)
220 2drp_A Protein (tramtrack DNA- 63.1 0.68 2.3E-05 28.5 -1.7 21 135-155 41-61 (66)
221 2adr_A ADR1; transcription reg 63.0 0.73 2.5E-05 27.8 -1.5 20 136-155 4-23 (60)
222 1bhi_A CRE-BP1, ATF-2; CRE bin 62.1 0.61 2.1E-05 25.4 -1.8 20 136-155 8-29 (38)
223 1x5w_A Zinc finger protein 64, 62.0 0.66 2.3E-05 29.0 -1.9 21 135-155 10-30 (70)
224 2lv2_A Insulinoma-associated p 61.2 0.77 2.6E-05 31.4 -1.8 21 135-155 29-49 (85)
225 2ctu_A Zinc finger protein 483 61.2 1.3 4.4E-05 27.3 -0.6 23 133-155 38-60 (73)
226 2eps_A POZ-, at HOOK-, and zin 60.4 0.65 2.2E-05 27.9 -2.1 21 135-155 13-33 (54)
227 2cot_A Zinc finger protein 435 59.6 0.84 2.9E-05 29.1 -1.8 20 135-154 47-66 (77)
228 2ct1_A Transcriptional repress 59.6 0.88 3E-05 29.0 -1.7 21 135-155 16-36 (77)
229 3u65_B TP33 protein; tetratric 59.2 18 0.0006 30.2 5.9 61 22-82 235-303 (328)
230 1f2i_G Fusion of N-terminal 17 58.9 0.91 3.1E-05 28.5 -1.7 21 135-155 50-70 (73)
231 1x6e_A Zinc finger protein 24; 57.9 0.8 2.7E-05 28.9 -2.1 21 135-155 43-63 (72)
232 2gqj_A Zinc finger protein KIA 57.3 0.91 3.1E-05 30.7 -2.0 22 134-155 54-75 (98)
233 2eln_A Zinc finger protein 406 57.3 0.74 2.5E-05 26.9 -2.1 19 136-154 11-31 (38)
234 2gqj_A Zinc finger protein KIA 56.7 1.2 4.2E-05 30.0 -1.4 25 134-160 24-49 (98)
235 2kmk_A Zinc finger protein GFI 56.7 1.1 3.7E-05 28.3 -1.6 21 135-155 58-78 (82)
236 1fu9_A U-shaped transcriptiona 56.5 0.81 2.8E-05 27.5 -2.0 23 132-154 6-28 (36)
237 2dmi_A Teashirt homolog 3; zin 56.0 1.2 4.2E-05 30.3 -1.5 31 135-165 81-111 (115)
238 2d9h_A Zinc finger protein 692 55.2 1.2 4E-05 28.4 -1.6 21 135-155 39-59 (78)
239 2dmd_A Zinc finger protein 64, 54.6 1.4 4.9E-05 28.8 -1.3 21 135-155 9-29 (96)
240 2lv2_A Insulinoma-associated p 53.0 1.3 4.5E-05 30.2 -1.7 21 135-155 57-77 (85)
241 2hzl_A Trap-T family sorbitol/ 52.2 23 0.0008 29.4 5.6 63 21-83 251-321 (365)
242 2ctd_A Zinc finger protein 512 52.1 1.5 5.2E-05 30.0 -1.6 21 135-155 35-56 (96)
243 2ej4_A Zinc finger protein ZIC 52.1 1.5 5E-05 28.8 -1.6 21 135-155 63-83 (95)
244 1va1_A Transcription factor SP 51.2 0.99 3.4E-05 24.7 -2.2 20 136-155 10-31 (37)
245 1x3c_A Zinc finger protein 292 51.1 1.2 4.1E-05 30.7 -2.2 25 135-160 28-54 (73)
246 1a1h_A QGSR zinc finger peptid 50.7 1.5 5.3E-05 28.2 -1.6 21 135-155 63-83 (90)
247 2vpn_A Periplasmic substrate b 50.4 17 0.00057 29.7 4.3 63 22-84 218-290 (316)
248 1x6h_A Transcriptional repress 49.3 1.2 4.2E-05 28.4 -2.3 20 135-154 48-67 (86)
249 2yt9_A Zinc finger-containing 49.0 1.5 5.1E-05 28.6 -1.9 22 134-155 65-86 (95)
250 1wjp_A Zinc finger protein 295 48.0 2.4 8.4E-05 28.5 -1.0 22 134-155 69-90 (107)
251 2wbs_A Krueppel-like factor 4; 47.6 1.6 5.5E-05 28.0 -1.9 21 135-155 66-86 (89)
252 2zzv_A ABC transporter, solute 46.2 27 0.00093 29.0 5.0 62 21-82 258-327 (361)
253 3fxb_A Trap dicarboxylate tran 45.9 39 0.0013 27.8 6.0 65 22-86 232-306 (326)
254 2ebt_A Krueppel-like factor 5; 45.7 1.8 6.1E-05 28.4 -2.0 21 135-155 76-96 (100)
255 2e72_A POGO transposable eleme 44.9 2.1 7.3E-05 27.3 -1.5 26 130-155 8-33 (49)
256 2ee8_A Protein ODD-skipped-rel 44.6 1.9 6.6E-05 28.7 -2.0 25 134-160 73-97 (106)
257 2eod_A TNF receptor-associated 44.6 1.7 5.9E-05 26.9 -2.1 21 135-155 37-58 (66)
258 1ncs_A Peptide M30F, transcrip 43.8 1.7 5.7E-05 25.3 -2.1 21 135-155 19-41 (47)
259 2ent_A Krueppel-like factor 15 43.1 1.7 5.8E-05 24.8 -2.2 20 136-155 14-35 (48)
260 2qgu_A Probable signal peptide 42.5 17 0.00058 28.7 3.1 41 8-48 69-111 (211)
261 2jp9_A Wilms tumor 1; DNA bind 41.4 2.7 9.1E-05 28.4 -1.7 21 135-155 67-87 (119)
262 2wbt_A B-129; zinc finger; 2.7 40.9 3 0.0001 29.0 -1.5 21 135-155 101-121 (129)
263 2dlq_A GLI-kruppel family memb 39.8 3.1 0.00011 28.2 -1.5 21 135-155 8-28 (124)
264 2csh_A Zinc finger protein 297 39.4 3 0.0001 28.0 -1.6 21 135-155 38-58 (110)
265 3fx7_A Putative uncharacterize 39.4 1E+02 0.0034 21.9 7.6 56 44-102 19-78 (94)
266 2lt7_A Transcriptional regulat 37.6 3.4 0.00012 30.0 -1.7 23 136-160 24-46 (133)
267 2d8v_A Zinc finger FYVE domain 36.7 4.2 0.00014 27.5 -1.2 22 133-154 27-48 (67)
268 2dlk_A Novel protein; ZF-C2H2 36.3 3 0.0001 26.2 -2.0 21 135-155 39-61 (79)
269 1ubd_C Protein (YY1 zinc finge 35.5 4.2 0.00014 27.7 -1.4 21 135-155 35-55 (124)
270 2ghf_A ZHX1, zinc fingers and 34.5 4.2 0.00014 28.6 -1.6 20 135-154 51-70 (102)
271 1x6f_A Zinc finger protein 462 33.2 3.6 0.00012 27.9 -2.1 21 135-155 26-46 (88)
272 2epa_A Krueppel-like factor 10 32.7 3.7 0.00013 25.4 -1.9 22 134-155 17-40 (72)
273 2l9z_A PR domain zinc finger p 32.6 2.7 9.3E-05 25.6 -2.4 16 131-146 8-23 (39)
274 2xv9_A ABA-1A1 repeat UNIT; li 32.1 1.6E+02 0.0054 22.0 7.5 68 7-74 33-120 (134)
275 2rpc_A Zinc finger protein ZIC 31.6 3.4 0.00012 29.4 -2.5 26 130-155 21-46 (155)
276 2j7j_A Transcription factor II 30.9 4.4 0.00015 25.4 -1.8 17 138-154 7-23 (85)
277 2i13_A AART; DNA binding, zinc 29.7 13 0.00044 27.4 0.3 23 133-155 20-42 (190)
278 3eph_A TRNA isopentenyltransfe 27.8 4.1 0.00014 36.0 -3.1 31 135-165 361-397 (409)
279 3itf_A Periplasmic adaptor pro 23.5 1.5E+02 0.005 22.3 5.3 33 51-90 107-139 (145)
280 3o39_A Periplasmic protein rel 21.4 91 0.0031 22.3 3.6 26 51-76 79-104 (108)
281 2hpg_A ABC transporter, peripl 21.3 93 0.0032 25.5 4.2 57 22-78 236-301 (327)
282 3nm8_A Tyrosinase; TYPE3 coppe 21.3 34 0.0012 28.8 1.5 25 56-80 7-31 (303)
283 3fx7_A Putative uncharacterize 20.5 1.9E+02 0.0064 20.4 5.0 39 13-51 25-66 (94)
No 1
>2gzk_A Sex-determining region on Y / HMGB1; protein-DNA complex, HMG BOX, amphoterin, DNA/structural protein complex; NMR {Homo sapiens} SCOP: a.21.1.1 a.21.1.1
Probab=99.81 E-value=7.9e-20 Score=142.09 Aligned_cols=87 Identities=25% Similarity=0.426 Sum_probs=82.4
Q ss_pred cccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH----------------------------------
Q psy1729 5 SEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL---------------------------------- 50 (170)
Q Consensus 5 k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em---------------------------------- 50 (170)
+.++|++++++|++.||++|++||+++|.+|.+.|..++++|..++
T Consensus 24 ~~~~P~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~y~~~k~~~kk~~kdp~~pKrp~say~lf~~~~ 103 (159)
T 2gzk_A 24 ALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRKGETKKKFKDPNAPKRPPSAFFLFCSEY 103 (159)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCSSCSCCCCCCGGGSCCTTCCCCCCCHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHHhhHHHhccHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccchhhHhh
Confidence 4789999999999999999999999999999999999999987644
Q ss_pred --------------hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHc
Q psy1729 51 --------------KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 91 (170)
Q Consensus 51 --------------Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~ 91 (170)
+|++.||++|++||+++|++|+++|+.++++|..+|.+|+.
T Consensus 104 r~~~~~~~p~~~~~ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~y~~ 158 (159)
T 2gzk_A 104 RPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 158 (159)
T ss_dssp HHHHHHHCSCCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78999999999999999999999999999999999999985
No 2
>2yrq_A High mobility group protein B1; HMG box domain, DNA binding, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.8e-19 Score=142.11 Aligned_cols=89 Identities=28% Similarity=0.480 Sum_probs=83.7
Q ss_pred ccccCCC--CCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH-------------------------------
Q psy1729 4 ESEKMIS--TTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL------------------------------- 50 (170)
Q Consensus 4 ~k~~~p~--~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em------------------------------- 50 (170)
.+.++|+ +++++|++.||++|++||++||++|.+.|..++++|..++
T Consensus 34 ~k~~~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~~~~~~~kk~~kdp~~pKrP~saf~lf~ 113 (173)
T 2yrq_A 34 HKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFC 113 (173)
T ss_dssp HHHHCTTCCCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHCCCCCCCSSCSCCCSSSCCCCCCHHHHHH
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccccCCccccCcccHHHHHH
Confidence 4678999 6999999999999999999999999999999999997765
Q ss_pred -----------------hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcc
Q psy1729 51 -----------------KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 92 (170)
Q Consensus 51 -----------------Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~ 92 (170)
+|++.||++|++||+++|++|+++|+.++++|..+|.+|+.+
T Consensus 114 ~~~r~~~~~~~p~~~~~ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~y~~k 172 (173)
T 2yrq_A 114 SEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK 172 (173)
T ss_dssp HHHHHHHHHHCSSSCHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999999999999999999999999999865
No 3
>3tq6_A Transcription factor A, mitochondrial; transcription, transcription regulation, mitochondrion; HET: DNA BRU 1PE; 2.45A {Homo sapiens}
Probab=99.79 E-value=4.7e-19 Score=145.21 Aligned_cols=90 Identities=24% Similarity=0.468 Sum_probs=83.2
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH---------------------------------
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL--------------------------------- 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em--------------------------------- 50 (170)
.+.++|++++++|++.||++|++||+++|.+|++.|..++++|..+|
T Consensus 28 ~k~~~P~~~~~eisk~lge~Wk~Ls~~EK~~y~~~A~~~k~~y~~e~~~y~~~~tp~q~~~~~~~~~~~~~krk~~kkkk 107 (214)
T 3tq6_A 28 FKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKK 107 (214)
T ss_dssp HHHHCTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCHHHHHHHHHHHHHccCHHhhhHHHHHHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHHHHHhhhcchhhhh
Confidence 46789999999999999999999999999999999999998874421
Q ss_pred --------------------------------hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcch
Q psy1729 51 --------------------------------KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 93 (170)
Q Consensus 51 --------------------------------Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~ 93 (170)
+|++.||++|++||+++|+||+++|++++++|..+|.+|+...
T Consensus 108 ~~kdp~~PKrP~say~lF~~e~r~~~k~~~p~ei~k~lg~~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~y~~~~ 182 (214)
T 3tq6_A 108 ELTLLGKPKRPRSAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQM 182 (214)
T ss_dssp HHHHTTCCCCCCCHHHHHHHHHTTTSSCSSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccCcccccchhhhhHHHHHHhhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999999999999764
No 4
>3tmm_A Transcription factor A, mitochondrial; HMG, high mobility group, transcription, LSP1, mitochon transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens}
Probab=99.78 E-value=5.1e-19 Score=147.05 Aligned_cols=90 Identities=24% Similarity=0.468 Sum_probs=83.3
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH---------------------------------
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL--------------------------------- 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em--------------------------------- 50 (170)
.+.++|++++++|++.||++|++||++||.+|++.|..++++|..+|
T Consensus 60 ~k~~~P~~~~~eisk~lge~Wk~Ls~~EK~~y~~~A~~~k~~y~~e~~~y~~~~~p~~~~~~~~~~~~k~~krk~~~kkk 139 (238)
T 3tmm_A 60 FKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMTKKK 139 (238)
T ss_dssp HHHHSTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhhhhcccchh
Confidence 46789999999999999999999999999999999999998874422
Q ss_pred --------------------------------hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcch
Q psy1729 51 --------------------------------KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 93 (170)
Q Consensus 51 --------------------------------Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~ 93 (170)
+|++.||++|++||+++|+||+++|++++++|+.+|.+|+...
T Consensus 140 ~~kdp~~PKrP~say~lF~~e~r~~~k~~~p~ei~k~lg~~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~y~~k~ 214 (238)
T 3tmm_A 140 ELTLLGKPKRPRSAYNVYVAERFQEAKGDSPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSWEEQM 214 (238)
T ss_dssp HHHHTTCCCCCCCHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCCCCCCcHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999999999999764
No 5
>1l8y_A Upstream binding factor 1; HUBF, HMG box 5, DNA binding domain, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1l8z_A 2hdz_A
Probab=99.20 E-value=2.2e-11 Score=88.44 Aligned_cols=65 Identities=25% Similarity=0.339 Sum_probs=53.3
Q ss_pred HHHhHHHHHHHHHHHHHHH-----HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcchhh
Q psy1729 31 EKKVYLDRAEVDKKRYREE-----LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAY 95 (170)
Q Consensus 31 EK~~Ye~~Ak~dKerY~~E-----mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~~~ 95 (170)
-...|.-.....+..|..+ .+|++.||++|++||++||+||+++|+.++++|+++|.+|+.+.+.
T Consensus 8 P~SAy~lf~~~~r~~~k~~~p~~~~evsK~lGe~Wk~ls~~eK~pye~kA~~dK~rYekEm~~Y~~~~~~ 77 (91)
T 1l8y_A 8 PKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAA 77 (91)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSTHHHHHHHHHHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHTTSCGGGS
T ss_pred CCCHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 3344555555666666554 3899999999999999999999999999999999999999876553
No 6
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=99.09 E-value=1.8e-10 Score=82.27 Aligned_cols=66 Identities=39% Similarity=0.648 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcchhhHHHH
Q psy1729 34 VYLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYL 99 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~~~~~~~ 99 (170)
.|.-.....+.....+ .+|++.||++|++||+++|++|+++|..++++|..+|.+|+.+.+|+.+.
T Consensus 14 af~lF~~~~r~~~~~~~p~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~~~~~~ 85 (92)
T 2crj_A 14 GYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELWAYQQSEAYKVCT 85 (92)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHSSHHHHCSS
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 3444455555554443 38999999999999999999999999999999999999999999987654
No 7
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=99.06 E-value=3.6e-10 Score=82.54 Aligned_cols=44 Identities=25% Similarity=0.489 Sum_probs=35.8
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcchh
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDA 94 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~~ 94 (170)
+|++.||++|++||++||+||+++|++++++|..+|++|..+..
T Consensus 36 eisK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~~~~ 79 (101)
T 1v63_A 36 ERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLS 79 (101)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 67888888888888888888888888888888888888886543
No 8
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=99.06 E-value=1e-10 Score=79.13 Aligned_cols=48 Identities=29% Similarity=0.424 Sum_probs=39.8
Q ss_pred ccccCCCCCH--HHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHh
Q psy1729 4 ESEKMISTTK--LLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELK 51 (170)
Q Consensus 4 ~k~~~p~~s~--~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmE 51 (170)
.++++|++++ ++|++.||++|++||+++|.+|.+.|..++++|..+|.
T Consensus 20 ~~~~~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 69 (71)
T 1ckt_A 20 HKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMK 69 (71)
T ss_dssp HHHHCTTCCCCHHHHHHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCCCCcHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888765 88888888888888888888888888888888887763
No 9
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=2.1e-10 Score=81.97 Aligned_cols=46 Identities=26% Similarity=0.280 Sum_probs=26.6
Q ss_pred cccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 5 SEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 5 k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
++++|++++++|++.||++|+.||+++|++|.+.|..++++|..+|
T Consensus 27 ~~~~p~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~e~ 72 (92)
T 2cs1_A 27 LIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQM 72 (92)
T ss_dssp HHHCCSSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHTTTHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666665555555555555555555555555555544
No 10
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=3.6e-10 Score=79.65 Aligned_cols=47 Identities=28% Similarity=0.352 Sum_probs=26.5
Q ss_pred cccCCCCC--HHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHh
Q psy1729 5 SEKMISTT--KLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELK 51 (170)
Q Consensus 5 k~~~p~~s--~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmE 51 (170)
++++|+++ +++|++.||++|++||+++|++|++.|..++++|..+|.
T Consensus 35 k~~~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 83 (86)
T 2eqz_A 35 KKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMK 83 (86)
T ss_dssp HHHCTTSCCCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555554 355666555555555555555555555555555555543
No 11
>1k99_A Upstream binding factor 1; alpha-helix, L-shape, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1
Probab=99.01 E-value=2.5e-10 Score=82.92 Aligned_cols=49 Identities=18% Similarity=0.306 Sum_probs=33.5
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhh
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKV 52 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi 52 (170)
+++++|++++++|++.||++|+.||+++|++|.+.|..++++|..+|..
T Consensus 29 ik~~~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~Y~~e~~~ 77 (99)
T 1k99_A 29 YAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLAR 77 (99)
T ss_dssp HHTTCTTSCSHHHHHHHHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556777777777777777777777777777777777777766666543
No 12
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=99.01 E-value=4.5e-10 Score=77.81 Aligned_cols=48 Identities=25% Similarity=0.309 Sum_probs=36.9
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHh
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELK 51 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmE 51 (170)
.++++|++++++|++.||++|+.||+++|++|.+.|..++++|..++.
T Consensus 21 ~~~~~p~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~ 68 (80)
T 1gt0_D 21 MAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHP 68 (80)
T ss_dssp HHTTSTTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCc
Confidence 356778888888888888888888888888888888888777776653
No 13
>1l8y_A Upstream binding factor 1; HUBF, HMG box 5, DNA binding domain, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1l8z_A 2hdz_A
Probab=99.01 E-value=3.3e-10 Score=82.27 Aligned_cols=50 Identities=22% Similarity=0.444 Sum_probs=46.1
Q ss_pred cccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhhhh
Q psy1729 5 SEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVTKL 55 (170)
Q Consensus 5 k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~K~ 55 (170)
++++|+ ++++|++.||++|++||+++|++|++.|+.++++|.++|..++.
T Consensus 24 k~~~p~-~~~evsK~lGe~Wk~ls~~eK~pye~kA~~dK~rYekEm~~Y~~ 73 (91)
T 1l8y_A 24 LARFKN-DRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRA 73 (91)
T ss_dssp HHHTTS-THHHHHHHHHHHHHTTGGGHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHcCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 578899 99999999999999999999999999999999999999966543
No 14
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=99.00 E-value=3.1e-10 Score=78.03 Aligned_cols=48 Identities=21% Similarity=0.311 Sum_probs=34.5
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHh
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELK 51 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmE 51 (170)
.++++|++++++|++.||++|+.||+++|++|.+.|..++++|..++.
T Consensus 25 ~~~~~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~ 72 (77)
T 1hme_A 25 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIA 72 (77)
T ss_dssp HHHHCTTCCHHHHHHHHHHHHHHSCGGGSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677777777777777777777777777777777777777766653
No 15
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=98.99 E-value=3.1e-10 Score=76.49 Aligned_cols=47 Identities=21% Similarity=0.397 Sum_probs=41.6
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
.++++|++++++|++.||+.|++||+++|++|.+.|..++++|..++
T Consensus 21 ~~~~~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~ 67 (71)
T 4a3n_A 21 LAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDH 67 (71)
T ss_dssp HHTTCTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 46789999999999999999999999999999999999999987754
No 16
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.98 E-value=9.9e-10 Score=80.19 Aligned_cols=64 Identities=19% Similarity=0.312 Sum_probs=55.0
Q ss_pred cccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhhhhHHHHhhCCChhhhhhhHHH
Q psy1729 5 SEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVTKLLGNEWSKLSLPEKKVYLDR 74 (170)
Q Consensus 5 k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~K~lg~~Wk~LS~~EK~~Y~~~ 74 (170)
.+++|+++++||++.||++|+.||++||++|+++|+.++++|..+|..+.. .|++.++..|.+.
T Consensus 26 ~p~~~~~~~~eisK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~------~~~~~~~~~~~~~ 89 (101)
T 1v63_A 26 NGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVK------SLSPQDRAAYKEY 89 (101)
T ss_dssp HCTTTTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HSCTTHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh------hCCHHHHHHHHHH
Confidence 356778999999999999999999999999999999999999998876544 6788877766553
No 17
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=98.98 E-value=6.4e-10 Score=79.38 Aligned_cols=51 Identities=39% Similarity=0.530 Sum_probs=47.1
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhhh
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVTK 54 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~K 54 (170)
+++++|++++++|++.||++|+.||+++|++|.+.|..++++|..++..++
T Consensus 26 ~~~~~p~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~ 76 (92)
T 2crj_A 26 IRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELWAYQ 76 (92)
T ss_dssp HHHHCTTCCHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999885443
No 18
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=98.97 E-value=4.8e-10 Score=75.36 Aligned_cols=39 Identities=33% Similarity=0.655 Sum_probs=36.6
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHH
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVY 89 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~y 89 (170)
++++.||++|++||+++|++|+++|..++++|..+|++|
T Consensus 28 ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~~y 66 (67)
T 3fgh_A 28 EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW 66 (67)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999999887
No 19
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=98.97 E-value=4e-10 Score=77.29 Aligned_cols=47 Identities=21% Similarity=0.254 Sum_probs=36.6
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
.++++|++++++|++.||++|+.||+++|++|.+.|..++++|..++
T Consensus 23 ~~~~~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~ 69 (76)
T 1hry_A 23 MALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKY 69 (76)
T ss_dssp HHHHCSCCSSSHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHCcCCCHHHHHHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 35677888888888888888888888888888888888888877654
No 20
>2lef_A LEF-1 HMG, protein (lymphoid enhancer-binding factor); LEF1, HMG, TCR-A, transcription factor; HET: DNA; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.97 E-value=7.4e-10 Score=77.93 Aligned_cols=45 Identities=22% Similarity=0.442 Sum_probs=30.4
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcchhh
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDAY 95 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~~~ 95 (170)
+|++.||++|++||+++|++|++.|+.++++|..++.+|+.++.+
T Consensus 32 eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~Yk~~p~~ 76 (86)
T 2lef_A 32 AINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNY 76 (86)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHSTTCCSCSST
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcccccCCCCC
Confidence 555666666666666666677777777777777777777765553
No 21
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=9.9e-10 Score=78.38 Aligned_cols=60 Identities=22% Similarity=0.260 Sum_probs=50.2
Q ss_pred hHHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcch
Q psy1729 34 VYLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 93 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~ 93 (170)
.|.-.+...+.....+ .+|++.||++|++||+++|++|+++|++++++|..+|.+|+.+.
T Consensus 14 ay~lF~~~~r~~~~~~~p~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~e~~~y~~~~ 79 (92)
T 2cs1_A 14 ASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAIEQE 79 (92)
T ss_dssp HHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHTTTHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4555556666555543 38999999999999999999999999999999999999998653
No 22
>1j46_A SRY, sex-determining region Y protein; MALE sex determining factor, SRY, sex-reversal mutation; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1j47_A
Probab=98.96 E-value=8e-10 Score=77.72 Aligned_cols=47 Identities=21% Similarity=0.254 Sum_probs=33.4
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
.++++|++++++|++.||++|+.||+++|++|.+.|..++++|..++
T Consensus 23 ~~~~~P~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~ 69 (85)
T 1j46_A 23 MALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKY 69 (85)
T ss_dssp HHHHSTTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 34567777777777777777777777777777777777777776654
No 23
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.96 E-value=1e-09 Score=79.84 Aligned_cols=44 Identities=34% Similarity=0.607 Sum_probs=28.5
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcchh
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDA 94 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~~ 94 (170)
+|++.||++|++||+++|++|+++|..++++|..+|.+|+.+..
T Consensus 47 eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~ 90 (102)
T 2co9_A 47 EVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLV 90 (102)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 55666666666666666666666666666666666666665544
No 24
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=2.3e-09 Score=75.49 Aligned_cols=57 Identities=25% Similarity=0.384 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHHHH--------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy1729 34 VYLDRAEVDKKRYREE--------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 90 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~E--------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk 90 (170)
.|.-.....+.....+ .+|++.||++|++||+++|++|+++|+.++++|..+|++|+
T Consensus 22 ay~lF~~~~r~~~k~~~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~Y~ 86 (86)
T 2eqz_A 22 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKDYG 86 (86)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4555555555554332 48999999999999999999999999999999999999984
No 25
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=98.94 E-value=8.8e-10 Score=75.94 Aligned_cols=47 Identities=19% Similarity=0.263 Sum_probs=37.4
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
.++++|++++++|++.||++|+.||+++|++|.+.|..++++|..++
T Consensus 21 ~~~~~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~ 67 (79)
T 3u2b_C 21 IMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKHMADY 67 (79)
T ss_dssp HHTTSTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHCcCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 45678888888888888888888888888888888888888877654
No 26
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=98.93 E-value=6e-10 Score=76.15 Aligned_cols=39 Identities=23% Similarity=0.377 Sum_probs=20.4
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHc
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 91 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~ 91 (170)
+|++.||++|++||+ |++|+++|++++++|..+|++|+.
T Consensus 33 eisk~lg~~Wk~ls~--K~~y~~~A~~~k~~y~~~~~~Y~~ 71 (73)
T 3nm9_A 33 EVAKRGGELWRAMKD--KSEWEAKAAKAKDDYDRAVKEFEA 71 (73)
T ss_dssp HHHHHHHHHHHHCSC--CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCc--hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444455555555554 555555555555555555555543
No 27
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.93 E-value=2.9e-10 Score=80.96 Aligned_cols=48 Identities=23% Similarity=0.255 Sum_probs=45.0
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHh
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELK 51 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmE 51 (170)
.++++|++++++|++.||++|+.||+++|++|.+.|..++++|..+|.
T Consensus 39 ~k~~~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~ 86 (90)
T 1wgf_A 39 LQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKSG 86 (90)
T ss_dssp HHHHCTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred HHHHCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999988764
No 28
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=98.93 E-value=1.3e-09 Score=73.63 Aligned_cols=40 Identities=35% Similarity=0.591 Sum_probs=38.2
Q ss_pred HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHH
Q psy1729 50 LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVY 89 (170)
Q Consensus 50 mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~y 89 (170)
.+|++.||++|++||+++|++|+++|+.++++|..+|++|
T Consensus 32 ~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~Y 71 (71)
T 1ckt_A 32 SEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 71 (71)
T ss_dssp HHHHHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999999999876
No 29
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=98.92 E-value=9e-10 Score=76.68 Aligned_cols=47 Identities=21% Similarity=0.397 Sum_probs=32.2
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
.++++|++++++|++.||++|+.||+++|++|.+.|..++++|..++
T Consensus 25 ~~~~~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~ 71 (83)
T 3f27_D 25 LAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDH 71 (83)
T ss_dssp HHHHCSSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 35567777777777777777777777777777777777666666554
No 30
>2lef_A LEF-1 HMG, protein (lymphoid enhancer-binding factor); LEF1, HMG, TCR-A, transcription factor; HET: DNA; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.92 E-value=6e-10 Score=78.40 Aligned_cols=42 Identities=19% Similarity=0.336 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhh
Q psy1729 11 TTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKV 52 (170)
Q Consensus 11 ~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi 52 (170)
+++++|++.||++|++||+++|++|.+.|..++++|..++..
T Consensus 28 ~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~ 69 (86)
T 2lef_A 28 KESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPG 69 (86)
T ss_dssp CCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHccc
Confidence 689999999999999999999999999999999999887643
No 31
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=98.91 E-value=5.8e-10 Score=77.73 Aligned_cols=47 Identities=23% Similarity=0.254 Sum_probs=37.0
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
.++++|++++++|++.||++|+.||+++|++|.+.|..++++|..++
T Consensus 26 ~~~~~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~ 72 (82)
T 1wz6_A 26 VRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKAN 72 (82)
T ss_dssp HHHHCSSSCTTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHCCCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 45677888888888888888888888888888888888888876654
No 32
>1wxl_A Single-strand recognition protein; FACT, SSRP1, HMG, DNA binding protein; NMR {Drosophila melanogaster}
Probab=98.91 E-value=1.2e-09 Score=74.68 Aligned_cols=48 Identities=25% Similarity=0.374 Sum_probs=34.8
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhh
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVT 53 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~ 53 (170)
.+.++|++++++|++.||++|++| ++|++|++.|..++++|..+|..+
T Consensus 22 ~~~~~p~~~~~eisk~lg~~Wk~l--~eK~~y~~~A~~~k~~y~~e~~~Y 69 (73)
T 1wxl_A 22 IKRENPGIKVTEIAKKGGEMWKEL--KDKSKWEDAAAKDKQRYHDEMRNY 69 (73)
T ss_dssp HHHHSTTCCHHHHHHHHHHHHHTC--TTHHHHHHHHHHHHHHHHTTTGGG
T ss_pred HHHHCCCCCHHHHHHHHHHHHHhh--HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 356677777777777777777777 777777777777777777766443
No 33
>1cg7_A Protein (NON histone protein 6 A); HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.21.1.1 PDB: 1j5n_A 1lwm_A
Probab=98.90 E-value=5.5e-10 Score=79.99 Aligned_cols=48 Identities=35% Similarity=0.480 Sum_probs=28.4
Q ss_pred cccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhh
Q psy1729 5 SEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKV 52 (170)
Q Consensus 5 k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi 52 (170)
++++|++++++|++.||++|++||+++|++|.+.|..++++|..++..
T Consensus 40 ~~~~P~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~e~~~ 87 (93)
T 1cg7_A 40 RSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKEL 87 (93)
T ss_dssp TTTCTTSCHHHHTTTHHHHHHTTHHHHHHHHHHHHTTHHHHTTHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666666666666666666666666666665555433
No 34
>1aab_A High mobility group protein; HMG-BOX, DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1
Probab=98.90 E-value=5.5e-10 Score=78.00 Aligned_cols=41 Identities=34% Similarity=0.569 Sum_probs=21.1
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHc
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 91 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~ 91 (170)
+|++.||++|++||+++|++|+++|..++++|..+|.+|+.
T Consensus 39 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~~ 79 (83)
T 1aab_A 39 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP 79 (83)
T ss_dssp SSHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44455555555555555555555555555555555555543
No 35
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.90 E-value=2.7e-09 Score=77.61 Aligned_cols=44 Identities=30% Similarity=0.470 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhhh
Q psy1729 11 TTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVTK 54 (170)
Q Consensus 11 ~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~K 54 (170)
+++++|++.||++|++||+++|++|.+.|..++++|..++..++
T Consensus 43 ~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~ 86 (102)
T 2co9_A 43 ATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYR 86 (102)
T ss_dssp SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999886654
No 36
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.88 E-value=1.5e-09 Score=75.40 Aligned_cols=47 Identities=19% Similarity=0.304 Sum_probs=36.0
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
.++++|++++++|++.||++|+.||+++|++|.+.|+.++++|..++
T Consensus 23 ~~~~~p~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~~~~ 69 (81)
T 1i11_A 23 ILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKY 69 (81)
T ss_dssp HHTTCSSCCHHHHHHHHHHHHTTSCSGGGHHHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCCCHHHHHHHHHhhhhhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 35677888888888888888888888888888888887777776543
No 37
>2e6o_A HMG box-containing protein 1; HMG-box domain, HMG-box transcription factor 1, high mobility group box transcription factor 1, structural genomics; NMR {Homo sapiens}
Probab=98.88 E-value=1.5e-09 Score=76.65 Aligned_cols=47 Identities=15% Similarity=0.285 Sum_probs=39.5
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
.+.++|++++++|++.||++|+.||+++|++|+++|..++++|.+++
T Consensus 36 ~~~~~P~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~~~~ 82 (87)
T 2e6o_A 36 YTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLN 82 (87)
T ss_dssp HHHHCTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 45678888888898888888888888888888888888888887653
No 38
>4euw_A Transcription factor SOX-9; protein-DNA complex, HMG domain, activator, DNA-binding, NUC transcription; HET: DNA; 2.77A {Homo sapiens}
Probab=98.87 E-value=2.4e-09 Score=78.59 Aligned_cols=45 Identities=20% Similarity=0.374 Sum_probs=22.4
Q ss_pred cccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHH
Q psy1729 5 SEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREE 49 (170)
Q Consensus 5 k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~E 49 (170)
++++|++++++|++.||++|+.||+++|++|+++|..++++|..+
T Consensus 49 k~~~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e 93 (106)
T 4euw_A 49 ADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKD 93 (106)
T ss_dssp HHHCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555555555555555544444444444443
No 39
>1aab_A High mobility group protein; HMG-BOX, DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1
Probab=98.87 E-value=5.8e-10 Score=77.89 Aligned_cols=51 Identities=27% Similarity=0.373 Sum_probs=46.1
Q ss_pred ccccCCCCCH--HHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhhh
Q psy1729 4 ESEKMISTTK--LLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVTK 54 (170)
Q Consensus 4 ~k~~~p~~s~--~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~K 54 (170)
++.++|++++ ++|++.||++|++||+++|.+|.+.|..++++|..+|..++
T Consensus 26 ~~~~~p~~~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~ 78 (83)
T 1aab_A 26 HKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYI 78 (83)
T ss_dssp HTTSCTTTCCCSSSSHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHCCCCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678999874 99999999999999999999999999999999999886543
No 40
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=98.85 E-value=2e-09 Score=73.94 Aligned_cols=41 Identities=29% Similarity=0.596 Sum_probs=39.6
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHc
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 91 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~ 91 (170)
+|++.||++|++||+++|++|+++|+.++++|..+|.+|+.
T Consensus 36 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~y~~ 76 (77)
T 1hme_A 36 DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRA 76 (77)
T ss_dssp HHHHHHHHHHHHSCGGGSHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999874
No 41
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=98.85 E-value=5.2e-09 Score=71.44 Aligned_cols=42 Identities=21% Similarity=0.243 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhhh
Q psy1729 11 TTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVTK 54 (170)
Q Consensus 11 ~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~K 54 (170)
+++++|++.||++|+.||+ |++|++.|..++++|..++..++
T Consensus 29 ~~~~eisk~lg~~Wk~ls~--K~~y~~~A~~~k~~y~~~~~~Y~ 70 (73)
T 3nm9_A 29 IKVTEVAKRGGELWRAMKD--KSEWEAKAAKAKDDYDRAVKEFE 70 (73)
T ss_dssp CCHHHHHHHHHHHHHHCSC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCc--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999998 99999999999999999886654
No 42
>1k99_A Upstream binding factor 1; alpha-helix, L-shape, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1
Probab=98.84 E-value=2.9e-09 Score=77.26 Aligned_cols=59 Identities=20% Similarity=0.423 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcc
Q psy1729 34 VYLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 92 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~ 92 (170)
.|.-.+...+.....+ .+|++.||++|++||+++|++|+++|+.++++|..+|++|...
T Consensus 17 af~lF~~~~r~~ik~~~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~Y~~e~~~y~~~ 81 (99)
T 1k99_A 17 PYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFRED 81 (99)
T ss_dssp HHHHHHHHHHHHHHTTCTTSCSHHHHHHHHHHHHHSCSTTHHHHHHHHHHHHHHHHHHHGGGGGC
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555554432 3899999999999999999999999999999999999999875
No 43
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=98.82 E-value=3e-09 Score=73.65 Aligned_cols=43 Identities=30% Similarity=0.449 Sum_probs=40.8
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcch
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 93 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~ 93 (170)
+|++.||++|++||+++|++|+++|..++++|..+|.+|+-++
T Consensus 32 eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~Yk~~p 74 (80)
T 1gt0_D 32 EISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRP 74 (80)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCCCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCcccccCC
Confidence 8999999999999999999999999999999999999998544
No 44
>2gzk_A Sex-determining region on Y / HMGB1; protein-DNA complex, HMG BOX, amphoterin, DNA/structural protein complex; NMR {Homo sapiens} SCOP: a.21.1.1 a.21.1.1
Probab=98.82 E-value=4e-09 Score=81.43 Aligned_cols=50 Identities=20% Similarity=0.286 Sum_probs=46.7
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhh
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVT 53 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~ 53 (170)
+++++|++++++|++.||++|++||+++|++|.+.|..++++|..+|..+
T Consensus 107 ~~~~~p~~~~~ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~y 156 (159)
T 2gzk_A 107 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY 156 (159)
T ss_dssp HHHHCSCCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999988554
No 45
>2lhj_A High mobility group protein homolog NHP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; NMR {Babesia bovis}
Probab=98.81 E-value=9.6e-10 Score=79.18 Aligned_cols=46 Identities=28% Similarity=0.420 Sum_probs=23.2
Q ss_pred cccCCCCC--HHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 5 SEKMISTT--KLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 5 k~~~p~~s--~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
++++|+++ +++|++.||++|++||+++|++|.+.|..++++|..++
T Consensus 42 k~~~p~~~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~ 89 (97)
T 2lhj_A 42 IAENPEIAKDVAAIGKMIGAAWNALSDEEKKPYERMSDEDRVRYEREK 89 (97)
T ss_dssp HHHCTTSTTCSSHHHHHHHHTSSSSCSTTTSSSSHHHHHHHHHHHHHH
T ss_pred HHHCCCCCccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555 55555555555555555544444444444444444444
No 46
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=98.80 E-value=4.2e-09 Score=72.09 Aligned_cols=57 Identities=21% Similarity=0.374 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHc
Q psy1729 35 YLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 91 (170)
Q Consensus 35 Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~ 91 (170)
|.-.....+.....+ .+|++.||++|++||+++|++|+++|+.++++|..++.+|+-
T Consensus 12 f~lf~~~~r~~~~~~~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~Yky 74 (76)
T 1hry_A 12 FIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKY 74 (76)
T ss_dssp HHHHHHHHHHHHHHHCSCCSSSHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHSSSCCC
T ss_pred HHHHHHHHHHHHHHHCcCCCHHHHHHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Confidence 444444444444432 289999999999999999999999999999999999998874
No 47
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=98.80 E-value=5.5e-09 Score=70.11 Aligned_cols=40 Identities=33% Similarity=0.574 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHh
Q psy1729 12 TKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELK 51 (170)
Q Consensus 12 s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmE 51 (170)
.+++|++.||++|++||+++|.+|.+.|..++++|..+|.
T Consensus 25 ~p~ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~ 64 (67)
T 3fgh_A 25 SPQEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMK 64 (67)
T ss_dssp SHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999999874
No 48
>1v64_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.80 E-value=4.1e-09 Score=77.82 Aligned_cols=45 Identities=29% Similarity=0.403 Sum_probs=41.9
Q ss_pred HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcchh
Q psy1729 50 LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSDA 94 (170)
Q Consensus 50 mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~~ 94 (170)
.+|++.||++|++||++||++|+++|+.++++|..+|.+|..+..
T Consensus 42 ~eisk~lg~~Wk~Ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~~~~ 86 (108)
T 1v64_A 42 TERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLP 86 (108)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 389999999999999999999999999999999999999997543
No 49
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=98.79 E-value=3.2e-09 Score=71.45 Aligned_cols=40 Identities=28% Similarity=0.603 Sum_probs=36.4
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 90 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk 90 (170)
+|++.||++|++||+++|++|+++|+.++++|..++++|+
T Consensus 32 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~YK 71 (71)
T 4a3n_A 32 ELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYK 71 (71)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCC---
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHCcCcC
Confidence 8999999999999999999999999999999999998885
No 50
>1cg7_A Protein (NON histone protein 6 A); HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.21.1.1 PDB: 1j5n_A 1lwm_A
Probab=98.77 E-value=2.5e-09 Score=76.53 Aligned_cols=43 Identities=40% Similarity=0.669 Sum_probs=41.0
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcch
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 93 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~ 93 (170)
+|++.||++|++||+++|++|+++|..++++|..+|.+|+.+.
T Consensus 50 eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~e~~~Y~~~~ 92 (93)
T 1cg7_A 50 QVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKELYNATL 92 (93)
T ss_dssp HHTTTHHHHHHTTHHHHHHHHHHHHTTHHHHTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 8999999999999999999999999999999999999998653
No 51
>1j46_A SRY, sex-determining region Y protein; MALE sex determining factor, SRY, sex-reversal mutation; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1j47_A
Probab=98.76 E-value=7.2e-09 Score=72.78 Aligned_cols=43 Identities=26% Similarity=0.419 Sum_probs=40.7
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcch
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 93 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~ 93 (170)
+|++.||++|++||+++|++|++.|+.++++|..++.+|+-++
T Consensus 34 eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~~~~Yk~~p 76 (85)
T 1j46_A 34 EISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRP 76 (85)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCCCCC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCcccccCC
Confidence 8999999999999999999999999999999999999998544
No 52
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=98.76 E-value=2.5e-09 Score=74.45 Aligned_cols=59 Identities=27% Similarity=0.355 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcch
Q psy1729 35 YLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 93 (170)
Q Consensus 35 Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~ 93 (170)
|.-.....+.....+ .+|++.||++|++||+++|++|+++|+.++++|..+|.+|+.++
T Consensus 15 f~lf~~~~r~~~~~~~p~~~~~eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~yk~~p 79 (82)
T 1wz6_A 15 FLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYRSGP 79 (82)
T ss_dssp HHHHHHHHHHHHHHHCSSSCTTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHCCSCSSCCCCT
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHhHHhhcCC
Confidence 444444444444443 28999999999999999999999999999999999999998654
No 53
>2lhj_A High mobility group protein homolog NHP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; NMR {Babesia bovis}
Probab=98.75 E-value=3.2e-09 Score=76.41 Aligned_cols=42 Identities=33% Similarity=0.579 Sum_probs=40.5
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcc
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 92 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~ 92 (170)
+|++.||++|++||+++|++|+++|..++++|..+|.+|+.+
T Consensus 54 eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~y~~~ 95 (97)
T 2lhj_A 54 AIGKMIGAAWNALSDEEKKPYERMSDEDRVRYEREKAEYAQR 95 (97)
T ss_dssp HHHHHHHHTSSSSCSTTTSSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999864
No 54
>1v64_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.73 E-value=1.8e-08 Score=74.31 Aligned_cols=46 Identities=26% Similarity=0.301 Sum_probs=42.7
Q ss_pred CCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhhhh
Q psy1729 10 STTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVTKL 55 (170)
Q Consensus 10 ~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~K~ 55 (170)
++++++|++.||++|++||+++|++|.+.|..++++|..+|..++.
T Consensus 38 ~~~~~eisk~lg~~Wk~Ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 83 (108)
T 1v64_A 38 DVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLE 83 (108)
T ss_dssp TSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999999999999999999999998865543
No 55
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=98.72 E-value=8.6e-09 Score=71.65 Aligned_cols=43 Identities=26% Similarity=0.538 Sum_probs=40.7
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcch
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 93 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~ 93 (170)
+|++.||++|++||+++|++|+++|+.++++|..++.+|+-++
T Consensus 36 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~Yky~P 78 (83)
T 3f27_D 36 ELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRP 78 (83)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCCCCC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHCCCCeeCC
Confidence 8999999999999999999999999999999999999998544
No 56
>2yrq_A High mobility group protein B1; HMG box domain, DNA binding, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.71 E-value=1.3e-08 Score=79.75 Aligned_cols=51 Identities=20% Similarity=0.298 Sum_probs=47.3
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHHhhhh
Q psy1729 4 ESEKMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVTK 54 (170)
Q Consensus 4 ~k~~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~EmEi~K 54 (170)
+++++|++++++|++.||++|++||+++|++|.+.|..++++|..++..++
T Consensus 120 ~~~~~p~~~~~ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~~~y~ 170 (173)
T 2yrq_A 120 IKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 170 (173)
T ss_dssp HHHHCSSSCHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999886544
No 57
>4euw_A Transcription factor SOX-9; protein-DNA complex, HMG domain, activator, DNA-binding, NUC transcription; HET: DNA; 2.77A {Homo sapiens}
Probab=98.69 E-value=1.4e-08 Score=74.40 Aligned_cols=59 Identities=19% Similarity=0.427 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcc
Q psy1729 34 VYLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 92 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~ 92 (170)
.|.-.....+.....+ .+|++.||++|++||+++|++|+++|++++++|..++++|+-+
T Consensus 36 af~lF~~~~r~~~k~~~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Yky~ 100 (106)
T 4euw_A 36 AFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQ 100 (106)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHCTTCCC-
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHhhhcCcC
Confidence 4555555555555443 3899999999999999999999999999999999999999843
No 58
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=98.69 E-value=8.6e-09 Score=70.90 Aligned_cols=43 Identities=21% Similarity=0.378 Sum_probs=40.6
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcch
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKSD 93 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~~ 93 (170)
+|++.||++|++||+++|++|+++|+.++++|..++.+|+-++
T Consensus 32 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~~p~Yky~P 74 (79)
T 3u2b_C 32 EISKRLGKRWKLLKDSDKIPFIQEAERLRLKHMADYPDYKYRP 74 (79)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCCeeCC
Confidence 8999999999999999999999999999999999999998543
No 59
>1wxl_A Single-strand recognition protein; FACT, SSRP1, HMG, DNA binding protein; NMR {Drosophila melanogaster}
Probab=98.68 E-value=1.5e-08 Score=69.06 Aligned_cols=57 Identities=25% Similarity=0.505 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcc
Q psy1729 34 VYLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 92 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~ 92 (170)
.|.-.....+.....+ .+|++.||++|++| ++|++|+++|..++++|..+|.+|+.+
T Consensus 10 ay~lf~~~~r~~~~~~~p~~~~~eisk~lg~~Wk~l--~eK~~y~~~A~~~k~~y~~e~~~Y~~~ 72 (73)
T 1wxl_A 10 AFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKEL--KDKSKWEDAAAKDKQRYHDEMRNYKPE 72 (73)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTC--TTHHHHHHHHHHHHHHHHTTTGGGTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhh--HhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3444445555554443 38999999999999 889999999999999999999999864
No 60
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=1e-08 Score=72.26 Aligned_cols=40 Identities=18% Similarity=0.081 Sum_probs=37.5
Q ss_pred ccccCCCCC-HHHHHHHHHHHhcCCChHHHHhHHHHHHHHH
Q psy1729 4 ESEKMISTT-KLLVTKLLGNEWSKLSLPEKKVYLDRAEVDK 43 (170)
Q Consensus 4 ~k~~~p~~s-~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dK 43 (170)
++.+||+++ +++|++.||++|++||+++|++|++.|+.+.
T Consensus 24 ik~~~P~~~~~~eisK~lge~Wk~ls~eeK~~y~~~A~~d~ 64 (81)
T 2d7l_A 24 ILSDNPDFSDEADIIKEGMIRFRVLSTEERKVWANKAKGET 64 (81)
T ss_dssp HHHHCTTCCSHHHHHHHHHHHHSSSCHHHHHHHHHHTTSSS
T ss_pred HHHHCCCCchhHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 578899998 9999999999999999999999999999874
No 61
>2e6o_A HMG box-containing protein 1; HMG-box domain, HMG-box transcription factor 1, high mobility group box transcription factor 1, structural genomics; NMR {Homo sapiens}
Probab=98.66 E-value=1.3e-08 Score=71.91 Aligned_cols=57 Identities=16% Similarity=0.272 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy1729 34 VYLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 90 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk 90 (170)
.|.-.....+.....+ .+|++.||++|++||+++|++|+++|+.++++|..++.+|+
T Consensus 24 af~lf~~~~r~~~~~~~P~~~~~eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~~~~P~Yk 86 (87)
T 2e6o_A 24 AFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDCW 86 (87)
T ss_dssp HHHHHHHHTHHHHHHHCTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 4555555555555442 38999999999999999999999999999999999987775
No 62
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.61 E-value=1.6e-08 Score=70.22 Aligned_cols=41 Identities=24% Similarity=0.468 Sum_probs=38.2
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHc
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRK 91 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~ 91 (170)
+|++.||++|++||+++|++|.+.|+.++++|..++.+|+-
T Consensus 34 eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~~~~p~Yky 74 (81)
T 1i11_A 34 NISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKY 74 (81)
T ss_dssp HHHHHHHHHHTTSCSGGGHHHHHHHHHHHHHHHTTCSCC--
T ss_pred HHHHHHHhhhhhCCHHHHHHHHHHHHHHHHHHHHHCCCCee
Confidence 89999999999999999999999999999999999998873
No 63
>2cto_A Novel protein; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=2.6e-08 Score=72.18 Aligned_cols=41 Identities=17% Similarity=0.230 Sum_probs=25.1
Q ss_pred CCCHHHHHHHH---HHHhcCCChHHHHhHHHHHHHHHHHHHHHH
Q psy1729 10 STTKLLVTKLL---GNEWSKLSLPEKKVYLDRAEVDKKRYREEL 50 (170)
Q Consensus 10 ~~s~~evsK~l---ge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em 50 (170)
++++++|++.| |++|++|+++||++|+++|..+|+.|..++
T Consensus 33 ~~~~~eisK~l~~cGe~Wk~ls~eEK~pYe~~A~~~K~~y~kd~ 76 (93)
T 2cto_A 33 GLPVARVADAIPYCSSDWALLREEEKEKYAEMAREWRAAQGKDP 76 (93)
T ss_dssp TCCCSSHHHHTGGGHHHHHHSCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccc
Confidence 45566666666 666666666666666666666666665543
No 64
>3tq6_A Transcription factor A, mitochondrial; transcription, transcription regulation, mitochondrion; HET: DNA BRU 1PE; 2.45A {Homo sapiens}
Probab=98.44 E-value=3.4e-07 Score=74.56 Aligned_cols=58 Identities=19% Similarity=0.471 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcc
Q psy1729 35 YLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 92 (170)
Q Consensus 35 Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~ 92 (170)
|.-.....+..+..+ .+|++.||++|++||++||.+|++.|..++++|..+|..|..+
T Consensus 17 y~lF~~~~r~~~k~~~P~~~~~eisk~lge~Wk~Ls~~EK~~y~~~A~~~k~~y~~e~~~y~~~ 80 (214)
T 3tq6_A 17 YLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQ 80 (214)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHccCHHhhhHHHHHHHHHHHHHHHHhhhhccc
Confidence 555555555555543 3899999999999999999999999999999999999999864
No 65
>3tmm_A Transcription factor A, mitochondrial; HMG, high mobility group, transcription, LSP1, mitochon transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens}
Probab=98.44 E-value=3.4e-07 Score=75.73 Aligned_cols=59 Identities=19% Similarity=0.458 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHHcc
Q psy1729 34 VYLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYRKS 92 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk~~ 92 (170)
.|.-.....+..+..+ .+|++.||++|++||++||.+|+++|..++++|+.+|..|..+
T Consensus 48 ay~lF~~e~r~~~k~~~P~~~~~eisk~lge~Wk~Ls~~EK~~y~~~A~~~k~~y~~e~~~y~~~ 112 (238)
T 3tmm_A 48 SYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQ 112 (238)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4777777777777654 2899999999999999999999999999999999999999754
No 66
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=98.44 E-value=4e-08 Score=69.78 Aligned_cols=55 Identities=24% Similarity=0.323 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHHHH------HhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHH
Q psy1729 34 VYLDRAEVDKKRYREE------LKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKV 88 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~E------mEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~ 88 (170)
.|.-.....+.....+ .+|++.||++|++||+++|++|+++|+.++++|..+|..
T Consensus 27 ay~lF~~~~r~~~k~~~P~~~~~eisk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~ 87 (90)
T 1wgf_A 27 AMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKSGP 87 (90)
T ss_dssp HHHHHHHHTHHHHHHHCTTSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTCCCCSS
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555443 389999999999999999999999999999999887643
No 67
>2cto_A Novel protein; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.38 E-value=1.1e-07 Score=68.94 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=34.2
Q ss_pred hhhhhH---HHHhhCCChhhhhhhHHHHHHHHHHHHHHH
Q psy1729 51 KVTKLL---GNEWSKLSLPEKKVYLDRAEVDKKRYREEL 86 (170)
Q Consensus 51 Ei~K~l---g~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em 86 (170)
+|++.| |++|++||++||+||+++|++++++|++++
T Consensus 38 eisK~l~~cGe~Wk~ls~eEK~pYe~~A~~~K~~y~kd~ 76 (93)
T 2cto_A 38 RVADAIPYCSSDWALLREEEKEKYAEMAREWRAAQGKDP 76 (93)
T ss_dssp SHHHHTGGGHHHHHHSCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccc
Confidence 788888 999999999999999999999999999886
No 68
>2yuk_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.28 E-value=3e-07 Score=66.39 Aligned_cols=41 Identities=22% Similarity=0.294 Sum_probs=36.9
Q ss_pred ccccCCCCC--HHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHH
Q psy1729 4 ESEKMISTT--KLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYRE 48 (170)
Q Consensus 4 ~k~~~p~~s--~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~ 48 (170)
++.+||+++ +++|+ ++|+.|++++|++|++.|..+++.|..
T Consensus 41 ik~enP~~s~~~~eIs----e~Wk~ls~eeK~pY~~kA~~~K~~h~~ 83 (90)
T 2yuk_A 41 LKEEFPDWTTRVKQIA----KLWRKASSQERAPYVQKARDNRAALRI 83 (90)
T ss_dssp HHHHCCSHHHHHHHHH----HHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCcCccchHHHHH----HHHHcCCHHHHHHHHHHHHHHHHHHHh
Confidence 578999999 99998 999999999999999999999998864
No 69
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.81 E-value=1.2e-05 Score=56.45 Aligned_cols=45 Identities=20% Similarity=0.180 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHHH-------HHhhhhhHHHHhhCCChhhhhhhHHHHHHH
Q psy1729 34 VYLDRAEVDKKRYRE-------ELKVTKLLGNEWSKLSLPEKKVYLDRAEVD 78 (170)
Q Consensus 34 ~Ye~~Ak~dKerY~~-------EmEi~K~lg~~Wk~LS~~EK~~Y~~~A~~d 78 (170)
.|.-.....+..... ..+|++.||++|++||+++|++|+++|+.+
T Consensus 12 ay~lF~~e~R~~ik~~~P~~~~~~eisK~lge~Wk~ls~eeK~~y~~~A~~d 63 (81)
T 2d7l_A 12 GFQMWLEENRSNILSDNPDFSDEADIIKEGMIRFRVLSTEERKVWANKAKGE 63 (81)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCSHHHHHHHHHHHHSSSCHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344455555555443 248999999999999999999999999887
No 70
>2yuk_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.72 E-value=2.6e-05 Score=56.11 Aligned_cols=51 Identities=20% Similarity=0.324 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHH-h---hhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHH
Q psy1729 35 YLDRAEVDKKRYREEL-K---VTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREE 85 (170)
Q Consensus 35 Ye~~Ak~dKerY~~Em-E---i~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~e 85 (170)
|.-.+...+.....+. . ....|+++|++||+++|+||+++|++++++|..+
T Consensus 30 f~lf~~e~R~kik~enP~~s~~~~eIse~Wk~ls~eeK~pY~~kA~~~K~~h~~~ 84 (90)
T 2yuk_A 30 PVLYTNINFPNLKEEFPDWTTRVKQIAKLWRKASSQERAPYVQKARDNRAALRIN 84 (90)
T ss_dssp HHHHHHHHCTTHHHHCCSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhHHHHHHHCcCccchHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 4445555555554432 1 1345669999999999999999999999999753
No 71
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=96.81 E-value=0.00011 Score=55.18 Aligned_cols=36 Identities=19% Similarity=0.507 Sum_probs=33.0
Q ss_pred ccCchhHHHHHHHHHhhhhhhhhhhhchhhhhhhhc
Q psy1729 129 EEDNEELYCRVCDQWFTTLHNKREHLNGRQHFQRFD 164 (170)
Q Consensus 129 ~~~~~~~~~~~~~~~f~~~h~~~~~~~~~~~~~~~~ 164 (170)
+..+...||.+|+.+|+|.....-|+.|+.|..++.
T Consensus 88 ~~~~~~~~C~~C~~~f~s~~~~~~H~~gk~H~~~~~ 123 (127)
T 1zu1_A 88 DGEDRSKCCPVCNMTFSSPVVAESHYIGKTHIKNLR 123 (127)
T ss_dssp SCCCTTTEETTTTEECSSHHHHHHHHTSHHHHHHHH
T ss_pred cCCCCCeEcCCCCCEeCCHHHHHHHHCCHHHHHHHH
Confidence 456788999999999999999999999999998875
No 72
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=96.16 E-value=0.00052 Score=52.10 Aligned_cols=41 Identities=22% Similarity=0.485 Sum_probs=35.3
Q ss_pred cccccccCchhHHHHHHHHHhhhhhhhhhhhchhhhhhhhc
Q psy1729 124 EIDEEEEDNEELYCRVCDQWFTTLHNKREHLNGRQHFQRFD 164 (170)
Q Consensus 124 ~~d~~~~~~~~~~~~~~~~~f~~~h~~~~~~~~~~~~~~~~ 164 (170)
.+|+|=+.....||..|+.+|++..++.-|+.++.|..++.
T Consensus 40 ~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk 80 (124)
T 1zr9_A 40 EFDPDLPGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLK 80 (124)
T ss_dssp SSCSSSGGGGCSEETTTTEECSSHHHHHHHTTCHHHHHHHH
T ss_pred cccccCCCCcceEcccCcchhCCHHHHHHHHhhhhhhHHHH
Confidence 34666566788999999999999999999999999998764
No 73
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=94.82 E-value=0.002 Score=48.17 Aligned_cols=33 Identities=21% Similarity=0.460 Sum_probs=30.0
Q ss_pred chhHHHHHHHHHhhhhhhhhhhhchhhhhhhhc
Q psy1729 132 NEELYCRVCDQWFTTLHNKREHLNGRQHFQRFD 164 (170)
Q Consensus 132 ~~~~~~~~~~~~f~~~h~~~~~~~~~~~~~~~~ 164 (170)
...+||.+|+..|.|-...+.|..|+.|..+|.
T Consensus 30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~ 62 (127)
T 1zu1_A 30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVR 62 (127)
T ss_dssp BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHH
T ss_pred CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHH
Confidence 456899999999999999999999999998864
No 74
>3cw1_L U1 small nuclear ribonucleoprotein C; PRE-mRNA splicing, spliceosome, RNA-binding domain, SM fold, finger, RNA recognition motif, 5' splice site; 5.49A {Homo sapiens} PDB: 1uw2_A 2vrd_A
Probab=93.77 E-value=0.0083 Score=42.03 Aligned_cols=31 Identities=26% Similarity=0.726 Sum_probs=26.5
Q ss_pred HHHHHHHHHh--hhhhhhhhhhchhhhhhhhcc
Q psy1729 135 LYCRVCDQWF--TTLHNKREHLNGRQHFQRFDR 165 (170)
Q Consensus 135 ~~~~~~~~~f--~~~h~~~~~~~~~~~~~~~~~ 165 (170)
-||-.|+-|| .|...-+.|..|++|..++..
T Consensus 4 YyCdYCd~~lt~Ds~s~Rk~H~~G~kH~~nv~~ 36 (77)
T 3cw1_L 4 FYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKD 36 (77)
T ss_pred cccccCCceecCCCHHHHHHHHccHHHHHHHHH
Confidence 4899999999 557768899999999998753
No 75
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=90.38 E-value=0.042 Score=27.89 Aligned_cols=20 Identities=20% Similarity=0.551 Sum_probs=18.2
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.||.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 4 VCERCGKRFVQSSQLANHIR 23 (26)
Confidence 48999999999999999974
No 76
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=88.74 E-value=0.074 Score=27.45 Aligned_cols=20 Identities=25% Similarity=0.526 Sum_probs=18.2
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2lvt_A 4 QCVMCGKAFTQASSLIAHVR 23 (29)
Confidence 59999999999999999974
No 77
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=87.91 E-value=0.053 Score=35.60 Aligned_cols=30 Identities=20% Similarity=0.503 Sum_probs=27.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhchhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLNGRQHFQRFD 164 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~~~~~~~~~~ 164 (170)
.-|..|+--||..-..|.|++.+||+..|.
T Consensus 14 ~eC~lC~vkYs~r~slqDHIFs~qHI~~vk 43 (55)
T 2yrk_A 14 PECTLCGVKYSARLSIRDHIFSKQHISKVR 43 (55)
T ss_dssp SCCTTTTCCCCSSSCHHHHHTSHHHHHHHH
T ss_pred ccccccCcccccccchhhhhccHHHHHHHH
Confidence 469999999999999999999999998764
No 78
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=87.50 E-value=0.11 Score=26.78 Aligned_cols=21 Identities=19% Similarity=0.456 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 4 ~~C~~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 4 YVCIHCQRQFADPGALQRHVR 24 (30)
Confidence 359999999999999999974
No 79
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=86.42 E-value=0.057 Score=27.65 Aligned_cols=20 Identities=25% Similarity=0.639 Sum_probs=18.0
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~ 23 (29)
T 1ard_A 4 VCEVCTRAFARQEHLKRHYR 23 (29)
T ss_dssp BCTTTCCBCSSHHHHHHHHH
T ss_pred ECCCCCcccCCHHHHHHHHH
Confidence 48899999999999999974
No 80
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=86.39 E-value=0.064 Score=28.98 Aligned_cols=20 Identities=20% Similarity=0.532 Sum_probs=17.9
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.||.
T Consensus 4 ~C~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 4 ACPACPKRFMRSDALSKHIK 23 (32)
T ss_dssp SSSSSCTTHHHHHTTSSSTT
T ss_pred CCCCCCcccCCHHHHHHHHH
Confidence 38899999999999999984
No 81
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=86.17 E-value=0.058 Score=27.84 Aligned_cols=20 Identities=20% Similarity=0.529 Sum_probs=18.0
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 5 RCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp EETTTTEEESCHHHHHHHHT
T ss_pred CCCCCCcccCCHHHHHHHHH
Confidence 38899999999999999974
No 82
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=86.05 E-value=0.044 Score=28.14 Aligned_cols=20 Identities=30% Similarity=0.688 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|.+|+..|++..+++.|+.
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 5 SCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp ECSSSCCEESCHHHHHHHHT
T ss_pred cCCCCCcccCCHHHHHHHHH
Confidence 38899999999999999974
No 83
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces cerevisiae}
Probab=85.47 E-value=0.08 Score=47.06 Aligned_cols=36 Identities=28% Similarity=0.680 Sum_probs=31.5
Q ss_pred cCchhHHHHHHHHHhhhhhhhhhhhchhhhhhhhcc
Q psy1729 130 EDNEELYCRVCDQWFTTLHNKREHLNGRQHFQRFDR 165 (170)
Q Consensus 130 ~~~~~~~~~~~~~~f~~~h~~~~~~~~~~~~~~~~~ 165 (170)
.+.+.+||..|..+|++..-...||.|+.|...+.+
T Consensus 288 ~~~~~l~C~~c~K~Fs~~~v~~~hL~GKkh~K~~~~ 323 (402)
T 4dgw_A 288 SEAKGIYCPFCSRWFKTSSVFESHLVGKIHKKNESK 323 (402)
T ss_dssp ETTTEECBTTTTBCBSSHHHHHTTSSSHHHHHHHHH
T ss_pred CCCcCeeehhhhhhhccccccHHHhcccccchhHHH
Confidence 345679999999999999999999999999887643
No 84
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=84.84 E-value=0.072 Score=27.13 Aligned_cols=20 Identities=45% Similarity=0.770 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 2m0f_A 4 KCRECGKQFTTSGNLKRHLR 23 (29)
T ss_dssp ECTTTSCEESCHHHHHHHHH
T ss_pred cCCCCCCccCChhHHHHHHH
Confidence 48899999999999999974
No 85
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.06 E-value=0.091 Score=28.80 Aligned_cols=21 Identities=24% Similarity=0.586 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (37)
T 2elo_A 10 YSCPVCEKSFSEDRLIKSHIK 30 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHH
Confidence 359999999999999999985
No 86
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=83.75 E-value=0.073 Score=26.90 Aligned_cols=19 Identities=21% Similarity=0.558 Sum_probs=17.3
Q ss_pred HHHHHHHhhhhhhhhhhhc
Q psy1729 137 CRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 137 ~~~~~~~f~~~h~~~~~~~ 155 (170)
|..|+..|++..+++.|+.
T Consensus 4 C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 4 CGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CSSSCCBCSSHHHHHHHGG
T ss_pred CCCCCCcCCCHHHHHHHHH
Confidence 7889999999999999983
No 87
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=83.37 E-value=0.088 Score=26.91 Aligned_cols=20 Identities=30% Similarity=0.630 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 5 ~C~~C~~~f~~~~~l~~H~~ 24 (30)
T 2m0d_A 5 QCDYCGRSFSDPTSKMRHLE 24 (30)
T ss_dssp ECTTTCCEESCHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHH
Confidence 38899999999999999974
No 88
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=82.94 E-value=0.11 Score=30.49 Aligned_cols=19 Identities=21% Similarity=0.424 Sum_probs=17.9
Q ss_pred HHHHHHHHhhhhhhhhhhh
Q psy1729 136 YCRVCDQWFTTLHNKREHL 154 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~ 154 (170)
-|..|+..|++..+++-||
T Consensus 10 ~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 10 MCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp EETTTTEECSCHHHHHHHH
T ss_pred ECCCCCCccCCHhHccCcC
Confidence 4899999999999999998
No 89
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=82.90 E-value=0.077 Score=27.07 Aligned_cols=20 Identities=25% Similarity=0.526 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 5 ~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 5 SCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp ECSSSSCEESSHHHHHHHHH
T ss_pred cCCCcChhhCCHHHHHHHHH
Confidence 38899999999999999974
No 90
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=82.72 E-value=0.08 Score=28.48 Aligned_cols=21 Identities=24% Similarity=0.532 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 8 ~~C~~C~k~f~~~~~L~~H~~ 28 (35)
T 2elx_A 8 YVCALCLKKFVSSIRLRSHIR 28 (35)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCcchhCCHHHHHHHHH
Confidence 459999999999999999974
No 91
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=82.71 E-value=0.086 Score=28.72 Aligned_cols=20 Identities=20% Similarity=0.519 Sum_probs=17.9
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|.+|+..|++..+++.||.
T Consensus 4 ~C~~C~k~F~~~~~L~~H~~ 23 (33)
T 1rim_A 4 ACPECPKRFMRSDHLSKHIT 23 (33)
T ss_dssp CCSSSCCCCSSHHHHHHHHH
T ss_pred cCCCCCchhCCHHHHHHHHH
Confidence 38899999999999999984
No 92
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.65 E-value=0.096 Score=28.61 Aligned_cols=21 Identities=24% Similarity=0.567 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elq_A 10 FKCSLCEYATRSKSNLKAHMN 30 (36)
T ss_dssp EECSSSSCEESCHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 358999999999999999984
No 93
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=81.03 E-value=0.093 Score=26.86 Aligned_cols=20 Identities=20% Similarity=0.395 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 4 ACPECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp ECSSSSCEESCSHHHHHHHT
T ss_pred cCCCCCchhCCHHHHHHHHH
Confidence 38889999999999999984
No 94
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.97 E-value=0.13 Score=28.03 Aligned_cols=21 Identities=29% Similarity=0.681 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2els_A 10 FTCEYCNKVFKFKHSLQAHLR 30 (36)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred EECCCCCceeCCHHHHHHHHH
Confidence 359999999999999999974
No 95
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=80.94 E-value=0.13 Score=28.69 Aligned_cols=21 Identities=24% Similarity=0.563 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 7 ~~C~~C~k~f~~~~~L~~H~~ 27 (39)
T 1njq_A 7 YTCSFCKREFRSAQALGGHMN 27 (39)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 359999999999999999984
No 96
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=80.92 E-value=0.1 Score=28.20 Aligned_cols=21 Identities=43% Similarity=0.714 Sum_probs=18.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 8 ~~C~~C~k~f~~~~~l~~H~~ 28 (35)
T 1srk_A 8 FVCRICLSAFTTKANCARHLK 28 (35)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred eeCCCCCcccCCHHHHHHHHH
Confidence 348999999999999999984
No 97
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.75 E-value=0.11 Score=28.42 Aligned_cols=21 Identities=19% Similarity=0.608 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elv_A 10 YDCHICERKFKNELDRDRHML 30 (36)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 459999999999999999984
No 98
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.60 E-value=0.14 Score=27.67 Aligned_cols=21 Identities=19% Similarity=0.442 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elr_A 10 HLCDMCGKKFKSKGTLKSHKL 30 (36)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred eecCcCCCCcCchHHHHHHHH
Confidence 459999999999999999974
No 99
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=80.49 E-value=0.18 Score=28.37 Aligned_cols=21 Identities=19% Similarity=0.414 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 12 ~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2ytb_A 12 YRCDQCGKAFSQKGSLIVHIR 32 (42)
T ss_dssp BCCTTTTCCBSSHHHHHTTGG
T ss_pred eeCCCccchhCCHHHHHHHHH
Confidence 459999999999999999984
No 100
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.34 E-value=0.11 Score=28.10 Aligned_cols=21 Identities=24% Similarity=0.294 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elt_A 10 YKCPQCSYASAIKANLNVHLR 30 (36)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 458999999999999999984
No 101
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=80.24 E-value=0.12 Score=26.21 Aligned_cols=19 Identities=37% Similarity=0.805 Sum_probs=17.3
Q ss_pred HHHHHHHhhhhhhhhhhhc
Q psy1729 137 CRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 137 ~~~~~~~f~~~h~~~~~~~ 155 (170)
|..|+..|++..+++.|+.
T Consensus 5 C~~C~~~f~~~~~l~~H~~ 23 (29)
T 2m0e_A 5 CPHCDKKFNQVGNLKAHLK 23 (29)
T ss_dssp CSSCCCCCCTTTHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHH
Confidence 8889999999999999984
No 102
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=79.57 E-value=0.18 Score=27.52 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 12 ~~C~~C~k~f~~~~~l~~H~~ 32 (37)
T 1p7a_A 12 FQCPDCDRSFSRSDHLALHRK 32 (37)
T ss_dssp BCCTTTCCCBSSHHHHHHHHG
T ss_pred ccCCCCCcccCcHHHHHHHHH
Confidence 459999999999999999974
No 103
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.25 E-value=0.12 Score=28.31 Aligned_cols=21 Identities=24% Similarity=0.610 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhh-hhhhhhhc
Q psy1729 135 LYCRVCDQWFTTL-HNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~-h~~~~~~~ 155 (170)
.-|..|+..|++. .+++.|+.
T Consensus 10 ~~C~~C~k~f~~~~~~L~~H~~ 31 (37)
T 2elp_A 10 MKCPYCDFYFMKNGSDLQRHIW 31 (37)
T ss_dssp EECSSSSCEECSSCHHHHHHHH
T ss_pred eECCCCChhhccCHHHHHHHHH
Confidence 4599999999999 99999983
No 104
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.29 E-value=0.19 Score=28.20 Aligned_cols=21 Identities=19% Similarity=0.431 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (42)
T 2yte_A 11 YSCAECKETFSDNNRLVQHQK 31 (42)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 459999999999999999975
No 105
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=78.27 E-value=0.18 Score=25.95 Aligned_cols=19 Identities=26% Similarity=0.473 Sum_probs=17.1
Q ss_pred HHHHHHHHhhhhhhhhhhh
Q psy1729 136 YCRVCDQWFTTLHNKREHL 154 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~ 154 (170)
-|..|+..|++..+++.|+
T Consensus 4 ~C~~C~k~f~~~~~l~~H~ 22 (30)
T 1paa_A 4 ACGLCNRAFTRRDLLIRHA 22 (30)
T ss_dssp BCTTTCCBCSSSHHHHHHH
T ss_pred CCcccCcccCChHHHHHHH
Confidence 3889999999999999995
No 106
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.07 E-value=0.22 Score=28.62 Aligned_cols=21 Identities=19% Similarity=0.403 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq4_A 13 YNCKECGKSFSRAPCLLKHER 33 (46)
T ss_dssp CCBTTTTBCCSCHHHHHHHHH
T ss_pred eECCCCCCccCchHHHHHHHH
Confidence 459999999999999999984
No 107
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.01 E-value=0.21 Score=28.83 Aligned_cols=21 Identities=29% Similarity=0.474 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emg_A 13 FICSECGKVFTHKTNLIIHQK 33 (46)
T ss_dssp CBCTTTCCBCSSHHHHHHHHT
T ss_pred EECCccCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 108
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.98 E-value=0.19 Score=28.31 Aligned_cols=21 Identities=24% Similarity=0.575 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 12 ~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2en2_A 12 YKCETCGARFVQVAHLRAHVL 32 (42)
T ss_dssp EECTTTCCEESSHHHHHHHTH
T ss_pred EeCCCcChhhCCHHHHHHHHH
Confidence 459999999999999999984
No 109
>4f9c_B Protein DBF4 homolog A; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_B* 4f9b_B* 4f9a_B*
Probab=77.71 E-value=0.23 Score=38.10 Aligned_cols=29 Identities=31% Similarity=0.480 Sum_probs=24.0
Q ss_pred hHHHHHHHHHhhhhhhhhhhhchhhhhhhhcc
Q psy1729 134 ELYCRVCDQWFTTLHNKREHLNGRQHFQRFDR 165 (170)
Q Consensus 134 ~~~~~~~~~~f~~~h~~~~~~~~~~~~~~~~~ 165 (170)
--||-.|...|..|. +|+.+++|+..++.
T Consensus 87 ~GyCE~C~~~y~~l~---~H~~s~~Hr~fa~~ 115 (144)
T 4f9c_B 87 KGYCECCLQKYEDLE---THLLSEQHRNFAQS 115 (144)
T ss_dssp -CEETTTTEECSCHH---HHHHSHHHHHHHTS
T ss_pred CCCccchhhhhhhHH---HHcCCHHHHHHHhc
Confidence 359999999998655 99999999887753
No 110
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.65 E-value=0.22 Score=28.37 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eoj_A 13 YECCECGKVFSRKDQLVSHQK 33 (44)
T ss_dssp CEETTTTEECSSHHHHHHHHT
T ss_pred eeCCCCCCccCCHHHHHHHHH
Confidence 459999999999999999985
No 111
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=77.56 E-value=0.15 Score=25.98 Aligned_cols=20 Identities=20% Similarity=0.494 Sum_probs=17.6
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 4 ~C~~C~k~f~~~~~l~~H~~ 23 (30)
T 1klr_A 4 QCQYCEFRSADSSNLKTHIK 23 (30)
T ss_dssp CCSSSSCCCSCSHHHHHHHH
T ss_pred cCCCCCCccCCHHHHHHHHH
Confidence 38889999999999999974
No 112
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.34 E-value=0.22 Score=28.52 Aligned_cols=21 Identities=24% Similarity=0.351 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eou_A 13 SECQECGKIFRHSSLLIEHQA 33 (44)
T ss_dssp CCCTTTCCCCSSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 113
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.30 E-value=0.21 Score=28.69 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (45)
T 2epu_A 13 FECTHCGKSFRAKGNLVTHQR 33 (45)
T ss_dssp EEETTTTEEESSHHHHHHHHT
T ss_pred ccCCCCCCccCChHHHHHHHH
Confidence 359999999999999999984
No 114
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.17 E-value=0.24 Score=28.65 Aligned_cols=21 Identities=24% Similarity=0.501 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2enh_A 13 YECDVCRKAFSHHASLTQHQR 33 (46)
T ss_dssp CBCTTTCCBCSSSHHHHHHGG
T ss_pred cCCCCcCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 115
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=77.12 E-value=0.2 Score=28.56 Aligned_cols=21 Identities=24% Similarity=0.548 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (44)
T 2eox_A 13 YNCNECGKAFTRIFHLTRHQK 33 (44)
T ss_dssp EEETTTTEEESSSHHHHTTHH
T ss_pred eECcccCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 116
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.91 E-value=0.24 Score=28.55 Aligned_cols=21 Identities=19% Similarity=0.377 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2epz_A 13 FDCIDCGKAFSDHIGLNQHRR 33 (46)
T ss_dssp BCCTTTCCCBSSHHHHHHHHT
T ss_pred eECCCCCceeCCHHHHHHHHH
Confidence 459999999999999999985
No 117
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.89 E-value=0.21 Score=28.34 Aligned_cols=21 Identities=29% Similarity=0.445 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2eof_A 13 YECNECQKAFNTKSNLMVHQR 33 (44)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred eECCCCCcccCCHhHHHHHHH
Confidence 459999999999999999984
No 118
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.71 E-value=0.23 Score=28.15 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2en7_A 13 YVCNECGKAFRSKSYLIIHTR 33 (44)
T ss_dssp SCCTTTCCCCSSHHHHHHHHT
T ss_pred eECCCCCCccCCHHHHHHHhh
Confidence 459999999999999999984
No 119
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.11 E-value=0.23 Score=28.50 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eor_A 13 YNCEECGKAFIHDSQLQEHQR 33 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred ccCCCCCCCcCCHHHHHHHHH
Confidence 459999999999999999984
No 120
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=76.07 E-value=0.24 Score=29.45 Aligned_cols=30 Identities=13% Similarity=0.378 Sum_probs=20.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhchhhhhhhhcc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLNGRQHFQRFDR 165 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~~~~~~~~~~~ 165 (170)
.-|.+|+..|++..+++.||. +-|.....+
T Consensus 8 ~~C~~C~k~F~~~~~L~~H~~-~~H~~e~~~ 37 (48)
T 3iuf_A 8 YACDICGKRYKNRPGLSYHYA-HSHLAEEEG 37 (48)
T ss_dssp EECTTTCCEESSHHHHHHHHH-HSSCC----
T ss_pred EECCCcCcccCCHHHHHHHhh-hhcCCCCCC
Confidence 359999999999999999984 145544333
No 121
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.04 E-value=0.2 Score=29.05 Aligned_cols=21 Identities=24% Similarity=0.510 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eon_A 13 YKCQVCGKAFRVSSHLVQHHS 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHTT
T ss_pred cCCCCCCcccCcHHHHHHHHH
Confidence 459999999999999999984
No 122
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=75.63 E-value=0.2 Score=28.18 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (42)
T 2el5_A 11 YECSECGKAFNRKDQLISHQR 31 (42)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred ccCCCcChhhCCHHHHHHHHH
Confidence 458999999999999999984
No 123
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.63 E-value=0.21 Score=28.21 Aligned_cols=21 Identities=29% Similarity=0.717 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 12 ~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2eos_A 12 YPCEICGTRFRHLQTLKSHLR 32 (42)
T ss_dssp BCCSSSCCCBSSHHHHHHHTT
T ss_pred EECCCCCCccCCHHHHHHHHH
Confidence 359999999999999999985
No 124
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=75.58 E-value=0.19 Score=28.21 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 12 ~~C~~C~k~f~~~~~l~~H~~ 32 (42)
T 2epc_A 12 YLCGQCGKSFTQRGSLAVHQR 32 (42)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHhh
Confidence 459999999999999999984
No 125
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.46 E-value=0.21 Score=28.57 Aligned_cols=21 Identities=24% Similarity=0.597 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (43)
T 2yrm_A 11 FFCNECDCRFSEEASLKRHTL 31 (43)
T ss_dssp BCCSSSCCCBSSHHHHHHHHH
T ss_pred EECCCCCCeeCChHHHHHHHH
Confidence 459999999999999999984
No 126
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.34 E-value=0.3 Score=28.12 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq1_A 13 YKCNECGKAFRAHSNLTTHQV 33 (46)
T ss_dssp CCCTTTTCCCSSHHHHHHHHT
T ss_pred eECCcCChhhCCHHHHHHHHH
Confidence 459999999999999999984
No 127
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.33 E-value=0.27 Score=27.99 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2emb_A 13 YECSKCQATFNLRKHLIQHQK 33 (44)
T ss_dssp EECTTTCCEESCHHHHHHHGG
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 459999999999999999984
No 128
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.33 E-value=0.27 Score=28.41 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2en9_A 13 FKCNECKKTFTQSSSLTVHQR 33 (46)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred EECCccCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 129
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=75.21 E-value=0.26 Score=29.70 Aligned_cols=21 Identities=29% Similarity=0.532 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 25 ~~C~~C~k~f~~~~~L~~H~~ 45 (54)
T 1yui_A 25 ATCPICYAVIRQSRNLRRHLE 45 (54)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 130
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=75.03 E-value=0.3 Score=28.22 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytm_A 13 YKCMECGKAFGDNSSCTQHQR 33 (46)
T ss_dssp SSBTTTTBCCSSHHHHHHHHH
T ss_pred cCCCCCCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 131
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.96 E-value=0.25 Score=28.52 Aligned_cols=21 Identities=24% Similarity=0.520 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yth_A 13 FQCEECGKRFTQNSHLHSHQR 33 (46)
T ss_dssp BCCSSSCCCBSSHHHHHHHGG
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 132
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.75 E-value=0.23 Score=28.81 Aligned_cols=21 Identities=24% Similarity=0.471 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eom_A 13 HRCSDCGKFFLQASNFIQHRR 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred cCCCCCCCeeCChHHHHHHHH
Confidence 459999999999999999974
No 133
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.35 E-value=0.24 Score=27.79 Aligned_cols=21 Identities=19% Similarity=0.331 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (41)
T 2ept_A 11 YECQECGKSFRQKGSLTLHER 31 (41)
T ss_dssp EECSSSCCEESSHHHHHHHGG
T ss_pred eECCCCCCCcCCHHHHHHHHH
Confidence 348999999999999999974
No 134
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.33 E-value=0.22 Score=28.61 Aligned_cols=21 Identities=29% Similarity=0.458 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytf_A 13 FECSECQKAFNTKSNLIVHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 135
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.32 E-value=0.25 Score=28.33 Aligned_cols=21 Identities=19% Similarity=0.349 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eow_A 13 YKCNECGKAFRARSSLAIHQA 33 (46)
T ss_dssp EECTTSCCEESSHHHHHHHHH
T ss_pred eeccccCChhcCHHHHHHHHH
Confidence 459999999999999999984
No 136
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.11 E-value=0.3 Score=28.00 Aligned_cols=21 Identities=19% Similarity=0.411 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq3_A 13 YECNQCGKAFSVRSSLTTHQA 33 (46)
T ss_dssp SEETTTTEECSSHHHHHHHHT
T ss_pred eECCCCChhhCCHHHHHHHHH
Confidence 459999999999999999984
No 137
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.04 E-value=0.3 Score=28.12 Aligned_cols=21 Identities=19% Similarity=0.425 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ysp_A 13 YKCEKCGKGYNSKFNLDMHQK 33 (46)
T ss_dssp EEETTTTEEESCHHHHHHHHT
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 459999999999999999985
No 138
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.04 E-value=0.3 Score=28.20 Aligned_cols=21 Identities=29% Similarity=0.588 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoz_A 13 YSCNVCGKAFVLSAHLNQHLR 33 (46)
T ss_dssp EEETTTTEEESSHHHHHHHHH
T ss_pred eECcccChhhCCHHHHHHHHH
Confidence 459999999999999999974
No 139
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.03 E-value=0.24 Score=28.53 Aligned_cols=21 Identities=24% Similarity=0.419 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2enf_A 13 YKCNECGKVFTQNSHLVRHRG 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHHT
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 140
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.01 E-value=0.26 Score=28.32 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep1_A 13 YECSDCGKSFIKKSQLHVHQR 33 (46)
T ss_dssp SCCSSSCCCCSSHHHHHHHHG
T ss_pred cCCCCCCchhCCHHHHHHHHH
Confidence 459999999999999999985
No 141
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=74.01 E-value=0.23 Score=28.65 Aligned_cols=21 Identities=19% Similarity=0.418 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emj_A 13 FECAECGKSFSISSQLATHQR 33 (46)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred EECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 142
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.96 E-value=0.23 Score=28.67 Aligned_cols=21 Identities=19% Similarity=0.319 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2ytp_A 13 YECSECGKAFARKSTLIMHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCcCCcccCCHHHHHHHHH
Confidence 459999999999999999985
No 143
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.91 E-value=0.23 Score=28.54 Aligned_cols=21 Identities=24% Similarity=0.460 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yrj_A 13 YRCGECGKAFAQKANLTQHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 459999999999999999984
No 144
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.54 E-value=0.31 Score=27.92 Aligned_cols=21 Identities=19% Similarity=0.437 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytr_A 13 YKCNECGKAFSQTSKLARHQR 33 (46)
T ss_dssp TCCTTTCCCCSSHHHHHHHHT
T ss_pred cCCCCCCCccCCHHHHHHHHH
Confidence 459999999999999999984
No 145
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.54 E-value=0.25 Score=28.43 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emi_A 13 YECSECGKAFIQKSTLSMHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred CCCCCCCcccCCHHHHHHHHh
Confidence 459999999999999999974
No 146
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=73.53 E-value=0.39 Score=30.81 Aligned_cols=19 Identities=26% Similarity=0.593 Sum_probs=15.7
Q ss_pred HHHHHHHHhhhhhhhhhhh
Q psy1729 136 YCRVCDQWFTTLHNKREHL 154 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~ 154 (170)
-|.+|+..|++..+++.||
T Consensus 34 ~C~~C~k~F~~~~~L~~H~ 52 (60)
T 4gzn_C 34 SCPECGKCFRDQSEVNRHL 52 (60)
T ss_dssp ECTTTCCEESSHHHHHHHG
T ss_pred ECCCCCCCcCCHHHHHHHh
Confidence 4788888888888888887
No 147
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.47 E-value=0.23 Score=28.71 Aligned_cols=21 Identities=19% Similarity=0.480 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoy_A 13 FKCNKCEKTFSCSKYLTQHER 33 (46)
T ss_dssp EECSSSCCEESSSHHHHHHHT
T ss_pred EECcCCCCcCCCHHHHHHHHH
Confidence 359999999999999999983
No 148
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.36 E-value=0.25 Score=28.29 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (44)
T 2epv_A 13 YECNECGKAFIWKSLLIVHER 33 (44)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred eECCCCCcccCchHHHHHHHh
Confidence 459999999999999999985
No 149
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.27 E-value=0.32 Score=27.97 Aligned_cols=21 Identities=14% Similarity=0.398 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytg_A 13 FKCGECGKSYNQRVHLTQHQR 33 (46)
T ss_dssp EECTTTCCEESSSHHHHTTGG
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 569999999999999999984
No 150
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.17 E-value=0.26 Score=28.46 Aligned_cols=21 Identities=24% Similarity=0.520 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em6_A 13 YKCDVCGKEFSQSSHLQTHQR 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHHT
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999974
No 151
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=73.00 E-value=0.26 Score=28.42 Aligned_cols=21 Identities=19% Similarity=0.507 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoh_A 13 YECKECRKTFIQIGHLNQHKR 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred cCCCCcCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 152
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.92 E-value=0.31 Score=27.94 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eme_A 13 YVCDYCGKAFGLSAELVRHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred eECCCCChhhCCHHHHHHHHH
Confidence 459999999999999999984
No 153
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.90 E-value=0.29 Score=28.17 Aligned_cols=21 Identities=19% Similarity=0.444 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eq2_A 13 YQCNECGKAFSQTSKLARHQR 33 (46)
T ss_dssp SSCCSSCCCCSSHHHHHHHGG
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 154
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.89 E-value=0.27 Score=28.41 Aligned_cols=21 Identities=24% Similarity=0.480 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emz_A 13 FKCNECGKGFGRRSHLAGHLR 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 155
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.88 E-value=0.36 Score=27.70 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2en1_A 13 FKCEECGKRFTQNSQLHSHQR 33 (46)
T ss_dssp EEETTTTEEESSHHHHHHHGG
T ss_pred eeCCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 156
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.85 E-value=0.37 Score=27.67 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2ytn_A 13 YKCNECGKVFTQNSHLARHRG 33 (46)
T ss_dssp CBCTTTCCBCSSHHHHHHHGG
T ss_pred eECCCCCCeeCCHHHHHHHhh
Confidence 459999999999999999974
No 157
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.82 E-value=0.32 Score=27.99 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yso_A 13 HQCRECGEIFFQYVSLIEHQV 33 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred EEccccChhhCCHHHHHHHHH
Confidence 459999999999999999984
No 158
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=72.76 E-value=0.25 Score=25.82 Aligned_cols=19 Identities=26% Similarity=0.601 Sum_probs=16.9
Q ss_pred HH--HHHHHhhhhhhhhhhhc
Q psy1729 137 CR--VCDQWFTTLHNKREHLN 155 (170)
Q Consensus 137 ~~--~~~~~f~~~h~~~~~~~ 155 (170)
|. .|+..|++..+++.|+.
T Consensus 5 C~~~~C~k~f~~~~~L~~H~~ 25 (31)
T 1sp2_A 5 CTWSYCGKRFTRSDELQRHKR 25 (31)
T ss_dssp CCSTTCCCBCSSHHHHHHHHT
T ss_pred CcCCCCCcccCCHhHHHHHHH
Confidence 65 89999999999999984
No 159
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.71 E-value=0.32 Score=27.97 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eq0_A 13 YKCHECGKVFRRNSHLARHQL 33 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHT
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 160
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=72.58 E-value=0.29 Score=28.09 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em9_A 13 YNCKECGKSFRWASCLLKHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHGG
T ss_pred eECCccccccCChHHHHHHHH
Confidence 459999999999999999984
No 161
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.56 E-value=0.26 Score=28.06 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 11 ~~C~~C~k~f~~~~~L~~H~~ 31 (44)
T 2emx_A 11 FGCSCCEKAFSSKSYLLVHQQ 31 (44)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 458999999999999999984
No 162
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.56 E-value=0.34 Score=27.86 Aligned_cols=21 Identities=19% Similarity=0.339 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2en6_A 13 YGCNECGKTFSQKSILSAHQR 33 (46)
T ss_dssp EEETTTTEEESSHHHHHHHHH
T ss_pred eECCCCCcccCchHHHHHHHH
Confidence 459999999999999999985
No 163
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.55 E-value=0.27 Score=28.27 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2yti_A 13 YKCNECGKVFTQNSHLARHRG 33 (46)
T ss_dssp TCCSSSCCCCSSHHHHHHHHT
T ss_pred eECCCCCcccCChhHHHHHhH
Confidence 459999999999999999973
No 164
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.53 E-value=0.26 Score=28.30 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emm_A 13 HKCNECGKSFIQSAHLIQHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eeCCCCChhhCCHHHHHHHHH
Confidence 459999999999999999984
No 165
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.52 E-value=0.32 Score=27.94 Aligned_cols=24 Identities=33% Similarity=0.531 Sum_probs=20.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhchhhhh
Q psy1729 135 LYCRVCDQWFTTLHNKREHLNGRQHF 160 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~~~~~~ 160 (170)
.-|..|+..|++..+++.|+. .|.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~--~H~ 36 (46)
T 2emh_A 13 YICTVCGKAFTDRSNLIKHQK--IHT 36 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHH--HHH
T ss_pred cCCCCCCchhCCHHHHHHHHH--hcC
Confidence 459999999999999999984 454
No 166
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.51 E-value=0.37 Score=27.60 Aligned_cols=21 Identities=24% Similarity=0.456 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eoe_A 13 YKCNECGKVFTQNSHLANHQR 33 (46)
T ss_dssp SEETTTTEECSSHHHHHHHHG
T ss_pred eECCCcChhhCCHHHHHHHHH
Confidence 459999999999999999984
No 167
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.45 E-value=0.29 Score=28.26 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emf_A 13 FECTECGKAFTRKSTLSMHQK 33 (46)
T ss_dssp EECSSSCCEESCHHHHHHHGG
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 168
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.42 E-value=0.26 Score=28.44 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em4_A 13 YECIECGKAFKTKSSLICHRR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHH
Confidence 459999999999999999974
No 169
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.30 E-value=0.26 Score=28.34 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep0_A 13 YKCDVCHKSFRYGSSLTVHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eeCcccCcccCChHHHHHHHH
Confidence 459999999999999999984
No 170
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=72.21 E-value=0.36 Score=27.66 Aligned_cols=21 Identities=24% Similarity=0.344 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eop_A 13 HECRECGKSFSFNSQLIVHQR 33 (46)
T ss_dssp CBCTTTCCBCSSHHHHHHHHT
T ss_pred eeCCCCCchhCCHHHHHHHHH
Confidence 459999999999999999985
No 171
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=71.95 E-value=0.29 Score=28.21 Aligned_cols=21 Identities=19% Similarity=0.373 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ely_A 13 FKCVECGKGFSRRSALNVHHK 33 (46)
T ss_dssp BCCSSSCCCBSSTTHHHHHHH
T ss_pred cccCccCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 172
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.86 E-value=0.3 Score=27.97 Aligned_cols=21 Identities=19% Similarity=0.429 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yts_A 13 YICNECGKSFIQKSHLNRHRR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHGG
T ss_pred EECCCCChhhCChHHHHHHHH
Confidence 459999999999999999984
No 173
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.74 E-value=0.28 Score=28.33 Aligned_cols=21 Identities=24% Similarity=0.513 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em2_A 13 FKCKECGKAFRQNIHLASHLR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred EECCcCCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 174
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=71.65 E-value=0.33 Score=27.90 Aligned_cols=21 Identities=38% Similarity=0.662 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2em0_A 13 WKCRECDMCFSQASSLRLHQN 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHGG
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 458999999999999999984
No 175
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=71.64 E-value=0.41 Score=27.98 Aligned_cols=22 Identities=18% Similarity=0.526 Sum_probs=19.3
Q ss_pred hHHHHHHHHHhhhhhhhhhhhc
Q psy1729 134 ELYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 134 ~~~~~~~~~~f~~~h~~~~~~~ 155 (170)
..-|..|+..|++..+++.||.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~ 33 (48)
T 2epr_A 12 QVACEICGKIFRDVYHLNRHKL 33 (48)
T ss_dssp SEEETTTTEEESSHHHHHHHGG
T ss_pred CeeCCCCCcccCCHHHHHHHHH
Confidence 3459999999999999999984
No 176
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.55 E-value=0.28 Score=28.22 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emy_A 13 YECHECGKAFSRKYQLISHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCcccCcHHHHHHHHH
Confidence 459999999999999999984
No 177
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.55 E-value=0.27 Score=28.31 Aligned_cols=21 Identities=24% Similarity=0.450 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2en3_A 13 FQCKECGMNFSWSCSLFKHLR 33 (46)
T ss_dssp EECSSSCCEESSSHHHHHHHH
T ss_pred eeCcccChhhCCHHHHHHHHH
Confidence 459999999999999999983
No 178
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.48 E-value=0.31 Score=28.02 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em7_A 13 YKCEECGKGFICRRDLYTHHM 33 (46)
T ss_dssp EECSSSCCEESCHHHHHHHGG
T ss_pred ccCCCccchhCCHHHHHHHHH
Confidence 459999999999999999984
No 179
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.48 E-value=0.28 Score=28.28 Aligned_cols=21 Identities=14% Similarity=0.257 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em8_A 13 YKCVECGKGYKRRLDLDFHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECcccCchhCCHHHHHHHHH
Confidence 459999999999999999985
No 180
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.44 E-value=0.28 Score=28.20 Aligned_cols=21 Identities=29% Similarity=0.585 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2em3_A 13 YECKVCSKAFTQKAHLAQHQK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 181
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.39 E-value=0.34 Score=27.95 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2elz_A 13 YKCEDCGKGYNRRLNLDMHQR 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred eeCcccCchhCCHHHHHHHHH
Confidence 459999999999999999985
No 182
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=71.33 E-value=0.29 Score=28.18 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep3_A 13 YRCAECGKAFTDRSNLFTHQK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 183
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=71.08 E-value=0.38 Score=27.55 Aligned_cols=21 Identities=24% Similarity=0.474 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 11 ~~C~~C~k~f~~~~~l~~H~~ 31 (45)
T 2epq_A 11 YSCPVCGLRFKRKDRMSYHVR 31 (45)
T ss_dssp SEETTTTEECSCHHHHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 184
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.99 E-value=0.29 Score=28.13 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytj_A 13 YICAECGKAFTIRSNLIKHQK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCChhhCCHHHHHHHHH
Confidence 459999999999999999984
No 185
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.93 E-value=0.28 Score=27.12 Aligned_cols=19 Identities=26% Similarity=0.490 Sum_probs=17.2
Q ss_pred HHHHHHHHHhhhhhhhhhh
Q psy1729 135 LYCRVCDQWFTTLHNKREH 153 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~ 153 (170)
.-|..|+..|++..+++.|
T Consensus 10 ~~C~~C~k~f~~~~~L~~H 28 (37)
T 2elm_A 10 YYCSQCHYSSITKNCLKRH 28 (37)
T ss_dssp EECSSSSCEEECHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHH
Confidence 3499999999999999999
No 186
>2pfz_A Putative exported protein; extracytoplasmic solute receptor, tripartite ATP independent periplasmic transport, pyroglutamic acid; 1.80A {Bordetella pertussis tohama I}
Probab=70.82 E-value=11 Score=30.68 Aligned_cols=63 Identities=8% Similarity=-0.012 Sum_probs=44.5
Q ss_pred HHhcCCChHHHHhHHHHHHHHHHH----HHH----HHhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHH
Q psy1729 22 NEWSKLSLPEKKVYLDRAEVDKKR----YRE----ELKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYRE 84 (170)
Q Consensus 22 e~Wk~Lse~EK~~Ye~~Ak~dKer----Y~~----EmEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~ 84 (170)
..|..||++.++.+.+.+.+.-.. +.. .++.++.-|-.+..++++++..|.+.++.....|..
T Consensus 215 ~~~~~L~~~~q~~i~~a~~~a~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~e~~~~~~~~~~~v~~~~~~ 285 (301)
T 2pfz_A 215 KAFDALDPATQQALKKAGAQAEERGWKLSQEKNSWYKEQLAKNGMAIIAPTAELKSGLTEVGKRMLDDWLK 285 (301)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999998866543322 211 124444556678899999999999988776666644
No 187
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.82 E-value=0.38 Score=27.54 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2en8_A 13 HTCDECGKNFCYISALRIHQR 33 (46)
T ss_dssp EECTTTCCEESSHHHHHHHHT
T ss_pred eECCCcCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 188
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.77 E-value=0.32 Score=28.02 Aligned_cols=21 Identities=19% Similarity=0.363 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytt_A 13 YQCSECGKSFSGSYRLTQHWI 33 (46)
T ss_dssp TCCSSSCCCCSSHHHHHHHHT
T ss_pred eeCCCCCcccCCHHHHHHHHH
Confidence 459999999999999999974
No 189
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.73 E-value=0.29 Score=27.85 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (44)
T 2yu5_A 13 FKCSKCDRVFTQRNYLVQHER 33 (44)
T ss_dssp EECSSSSCEESSSHHHHHHHH
T ss_pred eECCCCCchhCCHHHHHHHhH
Confidence 459999999999999999984
No 190
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.33 E-value=0.33 Score=27.90 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eml_A 13 YECSVCGKAFSHRQSLSVHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHG
T ss_pred eeCCCcCCccCCHHHHHHHHH
Confidence 459999999999999999985
No 191
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.29 E-value=0.31 Score=28.09 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2em5_A 13 HQCHECGRGFTLKSHLNQHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCcCCCccCCHHHHHHHHH
Confidence 459999999999999999984
No 192
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.17 E-value=0.32 Score=27.96 Aligned_cols=21 Identities=19% Similarity=0.366 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ene_A 13 YKCNECGKVFRHNSYLSRHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred eECCCCCchhCChHHHHHHHh
Confidence 459999999999999999985
No 193
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=70.07 E-value=0.32 Score=28.06 Aligned_cols=21 Identities=29% Similarity=0.479 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2eoo_A 13 YGCNECGKNFGRHSHLIEHLK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred EEccccCcccCCHHHHHHHHH
Confidence 458999999999999999974
No 194
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=69.92 E-value=0.37 Score=27.60 Aligned_cols=21 Identities=19% Similarity=0.302 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2el4_A 13 YGCSQCAKTFSLKSQLIVHQR 33 (46)
T ss_dssp EECSSSSCEESSHHHHHHHGG
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 458999999999999999984
No 195
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.71 E-value=0.33 Score=28.00 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yto_A 13 YKCSDCGKAFTRKSGLHIHQQ 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred EECcccCCccCCHhHHHHHHH
Confidence 458999999999999999984
No 196
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.51 E-value=0.35 Score=27.78 Aligned_cols=21 Identities=19% Similarity=0.439 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eoq_A 13 FKCDICGKSFCGRSRLNRHSM 33 (46)
T ss_dssp CCCSSSCCCCSSHHHHHHHHH
T ss_pred cCCCcCCchhCCHHHHHHHHH
Confidence 459999999999999999975
No 197
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.39 E-value=0.35 Score=27.85 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytq_A 13 YGCSECGKAFSSKSYLIIHMR 33 (46)
T ss_dssp CBCSSSCCBCSCHHHHHHHHT
T ss_pred cCCCccChhhCChHHHHHHHH
Confidence 459999999999999999985
No 198
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.04 E-value=0.34 Score=27.82 Aligned_cols=21 Identities=24% Similarity=0.496 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ep2_A 13 YECSICGKSFTKKSQLHVHQQ 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 199
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.91 E-value=0.33 Score=27.81 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2epw_A 13 CKCTECGKAFCWKSQLIMHQR 33 (46)
T ss_dssp EECSSSCCEESSSHHHHHHHH
T ss_pred eeCCCCCCccCCHHHHHHHHH
Confidence 458999999999999999984
No 200
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=68.72 E-value=0.35 Score=25.37 Aligned_cols=19 Identities=32% Similarity=0.607 Sum_probs=17.1
Q ss_pred HH--HHHHHhhhhhhhhhhhc
Q psy1729 137 CR--VCDQWFTTLHNKREHLN 155 (170)
Q Consensus 137 ~~--~~~~~f~~~h~~~~~~~ 155 (170)
|. .|+..|++..+++.|+.
T Consensus 6 C~~~~C~k~f~~~~~L~~H~~ 26 (32)
T 1zfd_A 6 CDHPGCDKAFVRNHDLIRHKK 26 (32)
T ss_dssp CCCTTCCCCBSSSHHHHHHHG
T ss_pred CcCCCCCCccCCHHHHHHHHH
Confidence 66 89999999999999984
No 201
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.69 E-value=0.37 Score=27.58 Aligned_cols=21 Identities=29% Similarity=0.401 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2eov_A 13 YKCSDCGKSFTWKSRLRIHQK 33 (46)
T ss_dssp CBCSSSCCBCSSHHHHHHHHH
T ss_pred ccCCccChhhCCHHHHHHHHH
Confidence 459999999999999999974
No 202
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.29 E-value=0.39 Score=27.52 Aligned_cols=21 Identities=19% Similarity=0.311 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (47)
T 2epx_A 13 YECIECGKAFIQNTSLIRHWR 33 (47)
T ss_dssp BCCSSSCCCBSSHHHHHHHHT
T ss_pred EECCccCchhCChHHHHHHhH
Confidence 458999999999999999985
No 203
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.64 E-value=0.38 Score=27.61 Aligned_cols=21 Identities=24% Similarity=0.388 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2enc_A 13 FKCEECGKGFYTNSQCYSHQR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred cCCCCCCCcCCChHHHHHHHH
Confidence 459999999999999999984
No 204
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=67.63 E-value=0.39 Score=27.58 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ema_A 13 YKCNECGKVFSRNSQLSQHQK 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHT
T ss_pred cCCCCCcchhCCHHHHHHHHH
Confidence 459999999999999999984
No 205
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=67.61 E-value=0.4 Score=27.61 Aligned_cols=21 Identities=19% Similarity=0.463 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~F~~~~~L~~H~~ 33 (46)
T 2emk_A 13 YECKECGKAFSQTTHLIQHQR 33 (46)
T ss_dssp CBCSSSCCBCSCHHHHHHHHH
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 459999999999999999984
No 206
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.59 E-value=0.37 Score=27.68 Aligned_cols=21 Identities=24% Similarity=0.439 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2yu8_A 13 YKCNECGKVFTQNSHLARHRR 33 (46)
T ss_dssp EECSSSCCEESSSHHHHHHTH
T ss_pred eECCcCCchhCCHHHHHHHHH
Confidence 458999999999999999984
No 207
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=67.50 E-value=0.51 Score=28.08 Aligned_cols=20 Identities=25% Similarity=0.529 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 6 ~C~~C~~~f~~~~~l~~H~~ 25 (57)
T 3uk3_C 6 ECSYCGKFFRSNYYLNIHLR 25 (57)
T ss_dssp BCTTTCCBCSCHHHHHHHHH
T ss_pred cCCCCcchhCChHHHHHHHH
Confidence 48899999999999999985
No 208
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=67.50 E-value=0.37 Score=24.32 Aligned_cols=20 Identities=20% Similarity=0.477 Sum_probs=17.4
Q ss_pred HHH--HHHHHhhhhhhhhhhhc
Q psy1729 136 YCR--VCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~--~~~~~f~~~h~~~~~~~ 155 (170)
-|. .|+..|++..+++.|+.
T Consensus 4 ~C~~~~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 4 VCHFENCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp EECSTTTCEEESSHHHHHHHHG
T ss_pred CCcCCcCcCccCCHHHHHHHHH
Confidence 377 89999999999999974
No 209
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=67.34 E-value=0.39 Score=27.57 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytk_A 13 YKCNECGKVFTQNSHLTNHWR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred EeCCcCCCccCCHHHHHHHHH
Confidence 459999999999999999984
No 210
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=66.94 E-value=0.44 Score=27.41 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2el6_A 13 YKCSQCEKSFSGKLRLLVHQR 33 (46)
T ss_dssp EECSSSSCEESSHHHHHHHHG
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999974
No 211
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.72 E-value=0.4 Score=27.51 Aligned_cols=21 Identities=19% Similarity=0.449 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2emp_A 13 YMCNECGKAFSVYSSLTTHQV 33 (46)
T ss_dssp EECSSSCCEESCHHHHHHHHH
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 458999999999999999984
No 212
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=65.78 E-value=0.58 Score=29.96 Aligned_cols=20 Identities=15% Similarity=0.546 Sum_probs=18.0
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 6 ~C~~C~k~F~~~~~L~~H~~ 25 (60)
T 4gzn_C 6 FCNFCGKTYRDASGLSRHRR 25 (60)
T ss_dssp ECTTTCCEESSHHHHHHHHH
T ss_pred cCCCCCCEeCCHHHHHHHHH
Confidence 38899999999999999984
No 213
>2pfy_A Putative exported protein; extracytoplasmic solute receptor, tripartite ATP independent periplasmic transport, pyroglutamic acid; 1.95A {Bordetella pertussis tohama I}
Probab=65.17 E-value=11 Score=30.62 Aligned_cols=63 Identities=13% Similarity=0.062 Sum_probs=44.1
Q ss_pred HHhcCCChHHHHhHHHHHHHHHHH----HHH----HHhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHH
Q psy1729 22 NEWSKLSLPEKKVYLDRAEVDKKR----YRE----ELKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYRE 84 (170)
Q Consensus 22 e~Wk~Lse~EK~~Ye~~Ak~dKer----Y~~----EmEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~ 84 (170)
..|..||++.++.+.+.+.+.-.. +.. .++.++.-|-.+..+|++++..|.+.++.....|..
T Consensus 216 ~~~~~L~~~~q~~i~~a~~~a~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~e~~~~~~~~~~~v~~~~~~ 286 (301)
T 2pfy_A 216 RAFQRLPAEVRQAVLDAGAKAEIRGWQTARAKTRELTDTLARNGMSVEPLPPQLAKELQAIGATMVSDWSK 286 (301)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999998866553322 211 124445556678899999999999888766655543
No 214
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.12 E-value=0.46 Score=27.25 Aligned_cols=21 Identities=24% Similarity=0.449 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (46)
T 2ytd_A 13 YKCSECGKAFHRHTHLNEHRR 33 (46)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCCeeCChHHHHHHHH
Confidence 458999999999999999974
No 215
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=64.66 E-value=0.66 Score=30.57 Aligned_cols=24 Identities=38% Similarity=0.614 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhchhhhh
Q psy1729 135 LYCRVCDQWFTTLHNKREHLNGRQHF 160 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~~~~~~ 160 (170)
.-|..|...|++..+++.||. .|.
T Consensus 14 y~C~~CgK~F~~~s~L~~H~r--~Ht 37 (66)
T 2epp_A 14 LPCGLCGKVFTDANRLRQHEA--QHG 37 (66)
T ss_dssp CCCTTTCCCCSCHHHHHHHHH--HHT
T ss_pred cCCCCCCCccCCHHHHHhhhh--hhC
Confidence 359999999999999999983 454
No 216
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=63.92 E-value=0.67 Score=27.53 Aligned_cols=19 Identities=16% Similarity=0.436 Sum_probs=16.0
Q ss_pred HHHHHHHhhhhhhhhhhhc
Q psy1729 137 CRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 137 ~~~~~~~f~~~h~~~~~~~ 155 (170)
|..|+..|++..+++.|+.
T Consensus 4 C~~C~~~f~~~~~l~~H~~ 22 (57)
T 1bbo_A 4 CEECGIRXKKPSMLKKHIR 22 (57)
T ss_dssp CTTTCCBCSSHHHHHHHHH
T ss_pred CCCCcCcCCCHHHHHHHHH
Confidence 7788888998888888874
No 217
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=63.64 E-value=0.67 Score=29.35 Aligned_cols=20 Identities=25% Similarity=0.584 Sum_probs=16.2
Q ss_pred HHHHHHHHHhhhhhhhhhhh
Q psy1729 135 LYCRVCDQWFTTLHNKREHL 154 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~ 154 (170)
.-|.+|+..|++..+++.||
T Consensus 46 ~~C~~C~k~f~~~~~L~~H~ 65 (74)
T 2lce_A 46 YRCNICGAQFNRPANLKTHT 65 (74)
T ss_dssp EECTTTCCEESCHHHHHHHH
T ss_pred EECCCCCchhCCHHHHHHHH
Confidence 45888888888888888887
No 218
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=63.39 E-value=3.8 Score=26.55 Aligned_cols=24 Identities=0% Similarity=-0.027 Sum_probs=21.1
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhch
Q psy1729 133 EELYCRVCDQWFTTLHNKREHLNG 156 (170)
Q Consensus 133 ~~~~~~~~~~~f~~~h~~~~~~~~ 156 (170)
....|..|+..|++..+++.||..
T Consensus 57 ~~~~c~~C~~~f~~~~~L~~H~~~ 80 (88)
T 1llm_C 57 LPILEDKVEELLSKNYHLENEVAR 80 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHhhhHHHHHH
Confidence 457899999999999999999864
No 219
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=63.38 E-value=5.2 Score=31.81 Aligned_cols=40 Identities=18% Similarity=0.245 Sum_probs=33.5
Q ss_pred hhhHHHHhhCCChhhhhhhHHHHHH-HHHHHHHHHHHHHcc
Q psy1729 53 TKLLGNEWSKLSLPEKKVYLDRAEV-DKKRYREELKVYRKS 92 (170)
Q Consensus 53 ~K~lg~~Wk~LS~~EK~~Y~~~A~~-dk~rY~~em~~yk~~ 92 (170)
...||.-|+.+|+++++.|.+.... ...-|-..+..|...
T Consensus 79 ~~vLG~~wr~at~~Qr~~F~~~F~~~L~~tY~~~l~~y~~q 119 (211)
T 2qgu_A 79 QIAMGRFWSQATPEQQQQIQDGFKSLLIRTYAGALANVRNQ 119 (211)
T ss_dssp HHHHGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHTCSSC
T ss_pred HHHHhHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 3568999999999999999998776 677788888888743
No 220
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=63.13 E-value=0.68 Score=28.47 Aligned_cols=21 Identities=29% Similarity=0.480 Sum_probs=18.4
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.|+.
T Consensus 41 ~~C~~C~k~f~~~~~L~~H~~ 61 (66)
T 2drp_A 41 YPCPFCFKEFTRKDNMTAHVK 61 (66)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 569999999999999999974
No 221
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=63.00 E-value=0.73 Score=27.75 Aligned_cols=20 Identities=25% Similarity=0.639 Sum_probs=16.3
Q ss_pred HHHHHHHHhhhhhhhhhhhc
Q psy1729 136 YCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~ 155 (170)
-|..|+..|++..+++.|+.
T Consensus 4 ~C~~C~~~f~~~~~l~~H~~ 23 (60)
T 2adr_A 4 VCEVCTRAFARQEHLKRHYR 23 (60)
T ss_dssp CCTTTCCCBSCHHHHHHHHH
T ss_pred cCCCCccccCCHHHHHHHHH
Confidence 37788888888888888874
No 222
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=62.08 E-value=0.61 Score=25.45 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=17.5
Q ss_pred HHH--HHHHHhhhhhhhhhhhc
Q psy1729 136 YCR--VCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~--~~~~~f~~~h~~~~~~~ 155 (170)
-|. .|+..|++..+++.|+.
T Consensus 8 ~C~~~~C~k~f~~~~~L~~H~~ 29 (38)
T 1bhi_A 8 LCTAPGCGQRFTNEDHLAVHKH 29 (38)
T ss_dssp ECCCTTTCCEESSHHHHHHHHH
T ss_pred ECCCCCCCcccCCHHHHHHHHH
Confidence 477 59999999999999983
No 223
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.05 E-value=0.66 Score=29.03 Aligned_cols=21 Identities=19% Similarity=0.222 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 10 ~~C~~C~k~f~~~~~L~~H~~ 30 (70)
T 1x5w_A 10 EKCSECSYSCSSKAALRIHER 30 (70)
T ss_dssp EECSSSSCEESSHHHHHHHHG
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 468999999999999999984
No 224
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=61.25 E-value=0.77 Score=31.42 Aligned_cols=21 Identities=29% Similarity=0.635 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
--|.+|+..|++..+++.||.
T Consensus 29 h~C~~Cgk~F~~~~~L~~H~~ 49 (85)
T 2lv2_A 29 HLCPVCGESFASKGAQERHLR 49 (85)
T ss_dssp EECTTSCCEESSHHHHHHHHH
T ss_pred EECCCCCCCcCcHHHHhhhhh
Confidence 359999999999999999983
No 225
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.24 E-value=1.3 Score=27.31 Aligned_cols=23 Identities=9% Similarity=0.097 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhc
Q psy1729 133 EELYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 133 ~~~~~~~~~~~f~~~h~~~~~~~ 155 (170)
...-|.+|+..|++..+++.||.
T Consensus 38 ~~~~C~~C~~~f~~~~~l~~H~~ 60 (73)
T 2ctu_A 38 KTPMCEKCRKDSCQEAALNKDEG 60 (73)
T ss_dssp SSCCCHHHHHTCSCCCSSCCCSS
T ss_pred CCCCCCCCChhhcCHHHHHHHHH
Confidence 34679999999999999999984
No 226
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=60.43 E-value=0.65 Score=27.91 Aligned_cols=21 Identities=19% Similarity=0.556 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|...|++..+++.||.
T Consensus 13 ~~C~~C~k~f~~~~~L~~H~~ 33 (54)
T 2eps_A 13 YICQSCGKGFSRPDHLNGHIK 33 (54)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 459999999999999999984
No 227
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.63 E-value=0.84 Score=29.10 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=16.0
Q ss_pred HHHHHHHHHhhhhhhhhhhh
Q psy1729 135 LYCRVCDQWFTTLHNKREHL 154 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~ 154 (170)
.-|.+|+..|++..+++.||
T Consensus 47 ~~C~~C~~~f~~~~~L~~H~ 66 (77)
T 2cot_A 47 YKCDECGKAFIQRSHLIGHH 66 (77)
T ss_dssp EECSSSCCEESSHHHHHHHG
T ss_pred eeCCCCCCccCCHHHHHHHH
Confidence 45888888888888888887
No 228
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.60 E-value=0.88 Score=29.00 Aligned_cols=21 Identities=24% Similarity=0.506 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 16 ~~C~~C~k~f~~~~~L~~H~~ 36 (77)
T 2ct1_A 16 YECYICHARFTQSGTMKMHIL 36 (77)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred eECCCcCchhCCHHHHHHHHH
Confidence 459999999999999999985
No 229
>3u65_B TP33 protein; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; HET: EDO; 1.40A {Treponema pallidum subsp} PDB: 4di4_B* 4di3_D*
Probab=59.21 E-value=18 Score=30.19 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=43.6
Q ss_pred HHhcCCChHHHHhHHHHHHHHHHHHHH--------HHhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHH
Q psy1729 22 NEWSKLSLPEKKVYLDRAEVDKKRYRE--------ELKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRY 82 (170)
Q Consensus 22 e~Wk~Lse~EK~~Ye~~Ak~dKerY~~--------EmEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY 82 (170)
..|..||++.++.+.+.+.+.-..... .++.++.-|-.-..+|+++++.|.+.+......+
T Consensus 235 ~~w~~L~~e~q~~i~~a~~e~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~e~~~~~~~~~~~v~~~~ 303 (328)
T 3u65_B 235 GSWARIPSRYHDAMLQAATRVRQRLANNLETLDRECSNNIQKAGVSIVHLTPQEIQEWRTEFAADVKRI 303 (328)
T ss_dssp HHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999999977664433211 1244455566678899999999999887655433
No 230
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=58.93 E-value=0.91 Score=28.46 Aligned_cols=21 Identities=24% Similarity=0.643 Sum_probs=17.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 50 ~~C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 50 FQCRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp EECTTTCCEESCHHHHHHHHT
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 458889999999999998874
No 231
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=57.87 E-value=0.8 Score=28.88 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=18.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 43 ~~C~~C~~~f~~~~~L~~H~~ 63 (72)
T 1x6e_A 43 YKCLECGKAFSQNSGLINHQR 63 (72)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHHHH
Confidence 469999999999999999973
No 232
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.32 E-value=0.91 Score=30.72 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=18.7
Q ss_pred hHHHHHHHHHhhhhhhhhhhhc
Q psy1729 134 ELYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 134 ~~~~~~~~~~f~~~h~~~~~~~ 155 (170)
-.-|.+|+..|++..+++.||.
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~ 75 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTM 75 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHH
T ss_pred CEECCCCCCccCCHHHHHHHHH
Confidence 3568999999999999999983
No 233
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.28 E-value=0.74 Score=26.89 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=17.0
Q ss_pred HHHH--HHHHhhhhhhhhhhh
Q psy1729 136 YCRV--CDQWFTTLHNKREHL 154 (170)
Q Consensus 136 ~~~~--~~~~f~~~h~~~~~~ 154 (170)
-|.. |+..|++..+++-||
T Consensus 11 ~C~~~~C~k~F~~~~~L~~H~ 31 (38)
T 2eln_A 11 KCPTDGCDYSTPDKYKLQAHL 31 (38)
T ss_dssp ECSSSSCCCEESCHHHHHHHH
T ss_pred CCCCCCCCCccCCHHHHHHHH
Confidence 4775 999999999999998
No 234
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.73 E-value=1.2 Score=30.05 Aligned_cols=25 Identities=24% Similarity=0.396 Sum_probs=21.0
Q ss_pred hHHHHHHHHHhh-hhhhhhhhhchhhhh
Q psy1729 134 ELYCRVCDQWFT-TLHNKREHLNGRQHF 160 (170)
Q Consensus 134 ~~~~~~~~~~f~-~~h~~~~~~~~~~~~ 160 (170)
..-|.+|+..|+ +..+++.|| +.|.
T Consensus 24 ~~~C~~C~k~f~~~~~~L~~H~--~~h~ 49 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHM--EVCQ 49 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHH--HHHH
T ss_pred CcCCCCCCCChhhhHHHHHHHH--HHHc
Confidence 356999999999 999999998 4454
No 235
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=56.70 E-value=1.1 Score=28.30 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 58 ~~C~~C~~~f~~~~~l~~H~~ 78 (82)
T 2kmk_A 58 HKCQVCGKAFSQSSNLITHSR 78 (82)
T ss_dssp EECTTTSCEESSHHHHHHHHH
T ss_pred CcCCCcchhhCChHHHHHHHH
Confidence 569999999999999999974
No 236
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=56.51 E-value=0.81 Score=27.52 Aligned_cols=23 Identities=26% Similarity=0.480 Sum_probs=19.6
Q ss_pred chhHHHHHHHHHhhhhhhhhhhh
Q psy1729 132 NEELYCRVCDQWFTTLHNKREHL 154 (170)
Q Consensus 132 ~~~~~~~~~~~~f~~~h~~~~~~ 154 (170)
...-+|..|+=.|+++.+..-|.
T Consensus 6 ~~~~~C~~C~IsF~~l~ty~aHK 28 (36)
T 1fu9_A 6 VMKKYCSTCDISFNYVKTYLAHK 28 (36)
T ss_dssp CCCSEETTTTEECSSHHHHHHHH
T ss_pred cCcCeeccccceehhhHHHhhhh
Confidence 34568999999999999998885
No 237
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.98 E-value=1.2 Score=30.31 Aligned_cols=31 Identities=26% Similarity=0.581 Sum_probs=25.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhchhhhhhhhcc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLNGRQHFQRFDR 165 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~~~~~~~~~~~ 165 (170)
.-|.+|+..|++..+++.||.--.|.+.+..
T Consensus 81 ~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~ 111 (115)
T 2dmi_A 81 LKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111 (115)
T ss_dssp CBCSSSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred eECCCCCCccCCHHHHHHHHHHhCCcccCCC
Confidence 5699999999999999999976666655543
No 238
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.25 E-value=1.2 Score=28.38 Aligned_cols=21 Identities=19% Similarity=0.490 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 39 ~~C~~C~k~f~~~~~L~~H~~ 59 (78)
T 2d9h_A 39 FPCEFCGKRFEKPDSVAAHRS 59 (78)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred cCCCCCCchhCCHHHHHHHHH
Confidence 459999999999999999974
No 239
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=54.61 E-value=1.4 Score=28.76 Aligned_cols=21 Identities=24% Similarity=0.642 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 9 ~~C~~C~~~f~~~~~l~~H~~ 29 (96)
T 2dmd_A 9 HKCEVCGKCFSRKDKLKTHMR 29 (96)
T ss_dssp CCBTTTTBCCCCHHHHHHHGG
T ss_pred eECCCCCCccCCHHHHHHHHH
Confidence 469999999999999999985
No 240
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=53.01 E-value=1.3 Score=30.21 Aligned_cols=21 Identities=24% Similarity=0.534 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
--|..|+..|++..+++.||.
T Consensus 57 ~~C~~C~k~F~~~~~L~~H~~ 77 (85)
T 2lv2_A 57 FPCKYCPATFYSSPGLTRHIN 77 (85)
T ss_dssp EECTTSSCEESSHHHHHHHHH
T ss_pred cCCCCCCCEeCCHHHHHHhCc
Confidence 459999999999999999984
No 241
>2hzl_A Trap-T family sorbitol/mannitol transporter, periplasmic binding protein, SMOM; trap transporter, periplasmic subunit, ligand binding; 1.40A {Rhodobacter sphaeroides 2} PDB: 2hzk_A
Probab=52.22 E-value=23 Score=29.41 Aligned_cols=63 Identities=10% Similarity=0.073 Sum_probs=42.2
Q ss_pred HHHhcCCChHHHHhHHHHHHHHHHH----HHH----HHhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHH
Q psy1729 21 GNEWSKLSLPEKKVYLDRAEVDKKR----YRE----ELKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYR 83 (170)
Q Consensus 21 ge~Wk~Lse~EK~~Ye~~Ak~dKer----Y~~----EmEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~ 83 (170)
...|..||++.++.+.+.+.+.-.. +.. .++.++.-|-.+..+|++++..|.+.+......|.
T Consensus 251 ~~~~~~L~~~~q~~l~~a~~~a~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~v~~~~~ 321 (365)
T 2hzl_A 251 KSAYEGLTPTYQSLLRTACHAADANMLQLYDWKNPTAIKSLVAQGTQLRPFSPEILQACFEAANEVYAEME 321 (365)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 3579999999999998876554322 211 12334444555778899999999888776555553
No 242
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.11 E-value=1.5 Score=29.99 Aligned_cols=21 Identities=19% Similarity=0.518 Sum_probs=18.7
Q ss_pred HHHHHHHHHh-hhhhhhhhhhc
Q psy1729 135 LYCRVCDQWF-TTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f-~~~h~~~~~~~ 155 (170)
.-|.+|+..| ++..+++.||.
T Consensus 35 ~~C~~C~k~F~~~~~~L~~H~~ 56 (96)
T 2ctd_A 35 VSCPTCQAVGRKTIEGLKKHME 56 (96)
T ss_dssp EECTTTCSCEESSHHHHHHHHH
T ss_pred cCCCCCCCCcccCHHHHHHHHH
Confidence 4699999999 99999999984
No 243
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.08 E-value=1.5 Score=28.77 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~ 83 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIR 83 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHH
T ss_pred cCCCCCCcccCCHHHHHHHHH
Confidence 469999999999999999984
No 244
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=51.20 E-value=0.99 Score=24.68 Aligned_cols=20 Identities=25% Similarity=0.589 Sum_probs=17.3
Q ss_pred HHH--HHHHHhhhhhhhhhhhc
Q psy1729 136 YCR--VCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~--~~~~~f~~~h~~~~~~~ 155 (170)
-|. .|+..|++..+++.|+.
T Consensus 10 ~C~~~~C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 10 ICHIQGCGKVYGKTSHLRAHLR 31 (37)
T ss_dssp ECCSTTCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCccCCHHHHHHHHH
Confidence 477 49999999999999974
No 245
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=51.07 E-value=1.2 Score=30.67 Aligned_cols=25 Identities=28% Similarity=0.267 Sum_probs=19.6
Q ss_pred HHHH--HHHHHhhhhhhhhhhhchhhhh
Q psy1729 135 LYCR--VCDQWFTTLHNKREHLNGRQHF 160 (170)
Q Consensus 135 ~~~~--~~~~~f~~~h~~~~~~~~~~~~ 160 (170)
-.|. .|+..|++..++.-||. |.|.
T Consensus 28 YkC~~~~CgKaFsr~s~L~~H~r-riHT 54 (73)
T 1x3c_A 28 YRCVHQGCFAAFTIQQNLILHYQ-AVHK 54 (73)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHH-HHSS
T ss_pred eECCCCCcChhHcCHHHHHHHhh-hhCC
Confidence 4585 49999999999999984 3453
No 246
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=50.75 E-value=1.5 Score=28.18 Aligned_cols=21 Identities=19% Similarity=0.661 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 63 ~~C~~C~~~f~~~~~l~~H~~ 83 (90)
T 1a1h_A 63 FACDICGRKFARSDERKRHTK 83 (90)
T ss_dssp EECTTTCCEESSHHHHHHHHG
T ss_pred ccCCCCCchhCCHHHHHHHHH
Confidence 569999999999999999984
No 247
>2vpn_A Periplasmic substrate binding protein; ectoine, hydroxyectoine, trap-transporter, periplasmic binding protein, transport; HET: 4CS; 1.55A {Halomonas elongata} PDB: 2vpo_A* 3gyy_A
Probab=50.40 E-value=17 Score=29.73 Aligned_cols=63 Identities=14% Similarity=0.184 Sum_probs=42.9
Q ss_pred HHhcCCChHHHHhHHHHHHHHHHH----HHH-H---Hhhh--hhHHHHhhCCChhhhhhhHHHHHHHHHHHHH
Q psy1729 22 NEWSKLSLPEKKVYLDRAEVDKKR----YRE-E---LKVT--KLLGNEWSKLSLPEKKVYLDRAEVDKKRYRE 84 (170)
Q Consensus 22 e~Wk~Lse~EK~~Ye~~Ak~dKer----Y~~-E---mEi~--K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~ 84 (170)
..|..||++.++.+.+.+.+.-.. +.. + ++.+ +.-|-.+..+|+++++.|.+.+......|..
T Consensus 218 ~~~~~L~~~~q~~l~~a~~~a~~~~~~~~~~~~~~~~~~l~~~~~Gv~v~~~~~~~~~~~~~~~~~v~~~~~~ 290 (316)
T 2vpn_A 218 DFYEGLSEEDQQLVQDAADAAYDHTIEHIKGLSEESLEKIKAASDEVTVTRLNDEQIQAFKERAPQVEEKFIE 290 (316)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCTTCEEEECCHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCEEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999998865543322 111 1 1333 3345568889999999999988766655544
No 248
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=49.28 E-value=1.2 Score=28.39 Aligned_cols=20 Identities=25% Similarity=0.536 Sum_probs=13.4
Q ss_pred HHHHHHHHHhhhhhhhhhhh
Q psy1729 135 LYCRVCDQWFTTLHNKREHL 154 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~ 154 (170)
.-|.+|+..|++..+++.||
T Consensus 48 ~~C~~C~~~f~~~~~L~~H~ 67 (86)
T 1x6h_A 48 FVCSKCGKTFTRRNTMARHA 67 (86)
T ss_dssp EECSSSCCEESCHHHHHHHH
T ss_pred eECCCCCChhCCHHHHHHHH
Confidence 34666777777777776666
No 249
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=49.01 E-value=1.5 Score=28.61 Aligned_cols=22 Identities=18% Similarity=0.523 Sum_probs=19.3
Q ss_pred hHHHHHHHHHhhhhhhhhhhhc
Q psy1729 134 ELYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 134 ~~~~~~~~~~f~~~h~~~~~~~ 155 (170)
..-|.+|+..|++..+++.||.
T Consensus 65 ~~~C~~C~~~f~~~~~L~~H~~ 86 (95)
T 2yt9_A 65 PYICQSCGKGFSRPDHLNGHIK 86 (95)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHH
T ss_pred ceECCCccchhCCHHHHHHHHH
Confidence 3569999999999999999984
No 250
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=48.00 E-value=2.4 Score=28.50 Aligned_cols=22 Identities=23% Similarity=0.356 Sum_probs=19.7
Q ss_pred hHHHHHHHHHhhhhhhhhhhhc
Q psy1729 134 ELYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 134 ~~~~~~~~~~f~~~h~~~~~~~ 155 (170)
..-|.+|+..|++..+++.||.
T Consensus 69 ~~~C~~C~~~f~~~~~L~~H~~ 90 (107)
T 1wjp_A 69 KLTCLECMRTFKSSFSIWRHQV 90 (107)
T ss_dssp GGEEGGGTEECSSHHHHHHHHH
T ss_pred CccCccccchhCCHHHHHHHHH
Confidence 3679999999999999999985
No 251
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=47.65 E-value=1.6 Score=28.02 Aligned_cols=21 Identities=24% Similarity=0.597 Sum_probs=18.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 66 ~~C~~C~~~f~~~~~l~~H~~ 86 (89)
T 2wbs_A 66 FQCQKCDRAFSRSDHLALHMK 86 (89)
T ss_dssp EECSSSSCEESSHHHHHHHGG
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 458999999999999999984
No 252
>2zzv_A ABC transporter, solute-binding protein; periplasmic substrate binding protein, calcium, lactate, trap transporter, transport protein; 1.40A {Thermus thermophilus} PDB: 2zzw_A 2zzx_A
Probab=46.24 E-value=27 Score=29.00 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=42.2
Q ss_pred HHHhcCCChHHHHhHHHHHHHHHHH----HHH----HHhhhhhHHHHhhCCChhhhhhhHHHHHHHHHHH
Q psy1729 21 GNEWSKLSLPEKKVYLDRAEVDKKR----YRE----ELKVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRY 82 (170)
Q Consensus 21 ge~Wk~Lse~EK~~Ye~~Ak~dKer----Y~~----EmEi~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY 82 (170)
...|..||++.++.+.+.+.+.... +.. .++.++.-|-.+..+|++++..|.+.+......|
T Consensus 258 ~~~~~~L~~~~q~~i~~a~~~a~~~~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~v~~~~ 327 (361)
T 2zzv_A 258 LNRWRSLPKPLQERFIAAVHEYSWIHYAGIQKANLEAWPKYRQAGVEVIRLSNEDVRKFRRLAIPIWFKW 327 (361)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH
Confidence 4579999999999998876554322 111 1233344455688899999999999877655444
No 253
>3fxb_A Trap dicarboxylate transporter, DCTP subunit; periplasmic substrate binding protein, selectivity helix, TR membrane; HET: 4CS; 2.90A {Silicibacter pomeroyi dss-3}
Probab=45.91 E-value=39 Score=27.85 Aligned_cols=65 Identities=9% Similarity=0.035 Sum_probs=43.1
Q ss_pred HHhcCCChHHHHhHHHHHHHHHHHHHHH-----HhhhhhH-----HHHhhCCChhhhhhhHHHHHHHHHHHHHHH
Q psy1729 22 NEWSKLSLPEKKVYLDRAEVDKKRYREE-----LKVTKLL-----GNEWSKLSLPEKKVYLDRAEVDKKRYREEL 86 (170)
Q Consensus 22 e~Wk~Lse~EK~~Ye~~Ak~dKerY~~E-----mEi~K~l-----g~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em 86 (170)
..|..||++.|+.+.+.+.+.-...... -+.++.+ |-.-..+|++++..|.+.+......|....
T Consensus 232 ~~w~~L~~e~q~~i~~aa~~~~~~~~~~~~~~~~~~~~~l~~~~~G~~v~~~~~~~~~~~~~a~~~v~~~~~~~~ 306 (326)
T 3fxb_A 232 DFYDGLSAEDQQLVQNAALAAYDHTVVYQQQAADTELAKIMEAKPEMQVTVLTDEQRSCFKEAAAEVEAKFIEMT 306 (326)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCTTCEEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCHHHHHHHHHHHHHHHHHHHHHc
Confidence 5799999999999998776543322111 1222222 233556899999999998887666665543
No 254
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=45.72 E-value=1.8 Score=28.43 Aligned_cols=21 Identities=24% Similarity=0.603 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 76 ~~C~~C~~~f~~~~~l~~H~~ 96 (100)
T 2ebt_A 76 FQCGVCNRSFSRSDHLALHMK 96 (100)
T ss_dssp CBCSSSCCBCSSHHHHHHHHH
T ss_pred eECCCCcCccCCHHHHHHHHH
Confidence 569999999999999999983
No 255
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.90 E-value=2.1 Score=27.27 Aligned_cols=26 Identities=23% Similarity=0.480 Sum_probs=22.0
Q ss_pred cCchhHHHHHHHHHhhhhhhhhhhhc
Q psy1729 130 EDNEELYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 130 ~~~~~~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.|-+--.|..|+.-|+.+--+|-||-
T Consensus 8 ~~~~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 8 QDGGRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp CCSSCCCCTTTCCCCSSHHHHHHHHH
T ss_pred ccCCceeCCcccccccchHHHHhhhh
Confidence 44466789999999999999999984
No 256
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=44.61 E-value=1.9 Score=28.75 Aligned_cols=25 Identities=20% Similarity=0.404 Sum_probs=21.0
Q ss_pred hHHHHHHHHHhhhhhhhhhhhchhhhh
Q psy1729 134 ELYCRVCDQWFTTLHNKREHLNGRQHF 160 (170)
Q Consensus 134 ~~~~~~~~~~f~~~h~~~~~~~~~~~~ 160 (170)
..-|.+|+..|.+..+++.|| +.|.
T Consensus 73 ~~~C~~C~~~f~~~~~L~~H~--~~H~ 97 (106)
T 2ee8_A 73 PFKCQECGKGFCQSRTLAVHK--TLHM 97 (106)
T ss_dssp TTSCSSSCCCCSSHHHHHHHH--HHTT
T ss_pred CeECCCcCCcccCHHHHHHHH--HHhC
Confidence 367999999999999999998 4554
No 257
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.57 E-value=1.7 Score=26.92 Aligned_cols=21 Identities=19% Similarity=0.328 Sum_probs=17.8
Q ss_pred HHHH-HHHHHhhhhhhhhhhhc
Q psy1729 135 LYCR-VCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~-~~~~~f~~~h~~~~~~~ 155 (170)
.-|. .|+..|++..+++.||.
T Consensus 37 ~~C~~~C~k~f~~~~~L~~H~~ 58 (66)
T 2eod_A 37 VACPNQCGVGTVAREDLPGHLK 58 (66)
T ss_dssp EECTTCCSCCEEETTTHHHHHH
T ss_pred ccCCcccCcccccHHHHHHHHH
Confidence 3488 89999999999999983
No 258
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=43.79 E-value=1.7 Score=25.27 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=17.9
Q ss_pred HHHH--HHHHHhhhhhhhhhhhc
Q psy1729 135 LYCR--VCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~--~~~~~f~~~h~~~~~~~ 155 (170)
.-|. .|+..|++..+++.|+.
T Consensus 19 ~~C~~~~C~k~F~~~~~L~~H~~ 41 (47)
T 1ncs_A 19 FECLFPGCTKTFKRRYNIRSHIQ 41 (47)
T ss_dssp EECCCTTCCCEECSSSSHHHHHH
T ss_pred eECCCCCCCCccCCHHHHHHHHH
Confidence 3484 79999999999999974
No 259
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.07 E-value=1.7 Score=24.77 Aligned_cols=20 Identities=20% Similarity=0.381 Sum_probs=17.6
Q ss_pred HHH--HHHHHhhhhhhhhhhhc
Q psy1729 136 YCR--VCDQWFTTLHNKREHLN 155 (170)
Q Consensus 136 ~~~--~~~~~f~~~h~~~~~~~ 155 (170)
-|. .|+..|++..+++.||.
T Consensus 14 ~C~~~~C~k~f~~~~~L~~H~~ 35 (48)
T 2ent_A 14 ACTWPGCGWRFSRSDELSRHRR 35 (48)
T ss_dssp ECCSSSCCCEESSHHHHHHHHT
T ss_pred ECCCCCCCCccCCHHHHHHHHH
Confidence 476 89999999999999984
No 260
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=42.53 E-value=17 Score=28.73 Aligned_cols=41 Identities=17% Similarity=0.207 Sum_probs=31.5
Q ss_pred CCCCCHHHHHHH-HHHHhcCCChHHHHhHHHHHHHHHHH-HHH
Q psy1729 8 MISTTKLLVTKL-LGNEWSKLSLPEKKVYLDRAEVDKKR-YRE 48 (170)
Q Consensus 8 ~p~~s~~evsK~-lge~Wk~Lse~EK~~Ye~~Ak~dKer-Y~~ 48 (170)
.|...+..+++. ||.-|+.+++++++.|.+.+..--.+ |..
T Consensus 69 ~p~~D~~~~a~~vLG~~wr~at~~Qr~~F~~~F~~~L~~tY~~ 111 (211)
T 2qgu_A 69 VPRADFKRTTQIAMGRFWSQATPEQQQQIQDGFKSLLIRTYAG 111 (211)
T ss_dssp GGGBCHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHhHhHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777664 58999999999999999988875543 554
No 261
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=41.38 E-value=2.7 Score=28.39 Aligned_cols=21 Identities=19% Similarity=0.607 Sum_probs=19.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 67 ~~C~~C~~~f~~~~~l~~H~~ 87 (119)
T 2jp9_A 67 FQCKTCQRKFSRSDHLKTHTR 87 (119)
T ss_dssp EECTTTCCEESCHHHHHHHHH
T ss_pred ccCCccCchhCCHHHHHHHHH
Confidence 569999999999999999984
No 262
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=40.93 E-value=3 Score=28.99 Aligned_cols=21 Identities=29% Similarity=0.589 Sum_probs=18.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 101 ~~C~~C~k~f~~~~~l~~H~~ 121 (129)
T 2wbt_A 101 KVCPVCKKEFTSTDSALDHVC 121 (129)
T ss_dssp CBCTTTCCBCSSHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 359999999999999998874
No 263
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=39.81 E-value=3.1 Score=28.17 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=14.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|..|+..|++..+++.||.
T Consensus 8 ~~C~~C~~~f~~~~~l~~H~~ 28 (124)
T 2dlq_A 8 VECPTCHKKFLSKYYLKVHNR 28 (124)
T ss_dssp CCCTTTCCCCSSHHHHHHHHH
T ss_pred CCCCCCCCcCCCHHHHHHHHH
Confidence 347777777777777777764
No 264
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.41 E-value=3 Score=28.01 Aligned_cols=21 Identities=29% Similarity=0.569 Sum_probs=18.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 38 ~~C~~C~~~f~~~~~l~~H~~ 58 (110)
T 2csh_A 38 YGCGVCGKKFKMKHHLVGHMK 58 (110)
T ss_dssp EECTTTSCEESSSHHHHHHHT
T ss_pred ccCCCCCcccCCHHHHHHHHH
Confidence 569999999999999999985
No 265
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=39.41 E-value=1e+02 Score=21.89 Aligned_cols=56 Identities=16% Similarity=0.294 Sum_probs=39.4
Q ss_pred HHHHHHH-hhhhhHHHHhhCCC---hhhhhhhHHHHHHHHHHHHHHHHHHHcchhhHHHHHHh
Q psy1729 44 KRYREEL-KVTKLLGNEWSKLS---LPEKKVYLDRAEVDKKRYREELKVYRKSDAYQSYLRRK 102 (170)
Q Consensus 44 erY~~Em-Ei~K~lg~~Wk~LS---~~EK~~Y~~~A~~dk~rY~~em~~yk~~~~~~~~~~~k 102 (170)
++|...+ +.+..|...|.+|+ +.++.+|.+.-.+....|..-+. ....|-+|++.+
T Consensus 19 ~~F~d~Lq~~~~~L~~~f~~L~sWqDqkr~kFee~fe~l~s~l~~f~e---~a~e~vp~L~~~ 78 (94)
T 3fx7_A 19 ERFKELLREEVNSLSNHFHNLESWRDARRDKFSEVLDNLKSTFNEFDE---AAQEQIAWLKER 78 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSCCSHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccchHhhHHHHHHHHHHHHHHHHHHHHHH---hhHHHhHHHHHH
Confidence 3454444 55667788888887 78899999988888777777665 335566776654
No 266
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=37.56 E-value=3.4 Score=30.02 Aligned_cols=23 Identities=35% Similarity=0.686 Sum_probs=19.6
Q ss_pred HHHHHHHHhhhhhhhhhhhchhhhh
Q psy1729 136 YCRVCDQWFTTLHNKREHLNGRQHF 160 (170)
Q Consensus 136 ~~~~~~~~f~~~h~~~~~~~~~~~~ 160 (170)
-|.+|+..|++..+++.||. .|.
T Consensus 24 ~C~~C~k~F~~~~~L~~H~~--~H~ 46 (133)
T 2lt7_A 24 ICIVCKRSYVCLTSLRRHFN--IHS 46 (133)
T ss_dssp EETTTCCEESCHHHHHHHHH--HHH
T ss_pred ECCCCCCCcCCHHHHHHHHH--HcC
Confidence 49999999999999999984 453
No 267
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=36.65 E-value=4.2 Score=27.54 Aligned_cols=22 Identities=27% Similarity=0.440 Sum_probs=15.6
Q ss_pred hhHHHHHHHHHhhhhhhhhhhh
Q psy1729 133 EELYCRVCDQWFTTLHNKREHL 154 (170)
Q Consensus 133 ~~~~~~~~~~~f~~~h~~~~~~ 154 (170)
++|||..|..-++---..|+|-
T Consensus 27 gDLYC~rC~rE~H~~~d~r~Hk 48 (67)
T 2d8v_A 27 GDLYCARCFREGHDNFDLKEHQ 48 (67)
T ss_dssp SEEECSSHHHHHTTTSSTTTCC
T ss_pred CceehHHHHHHHccchhhhccc
Confidence 4699999988777544556553
No 268
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.28 E-value=3 Score=26.20 Aligned_cols=21 Identities=24% Similarity=0.594 Sum_probs=18.6
Q ss_pred HHHHH--HHHHhhhhhhhhhhhc
Q psy1729 135 LYCRV--CDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~--~~~~f~~~h~~~~~~~ 155 (170)
.-|.. |+..|++..+++.||.
T Consensus 39 ~~C~~~~C~k~f~~~~~L~~H~~ 61 (79)
T 2dlk_A 39 FSCPEPACGKSFNFKKHLKEHMK 61 (79)
T ss_dssp EECSCTTTCCEESSHHHHHHHHH
T ss_pred eECCCCCCcCccCCHHHHHHHHH
Confidence 45887 9999999999999985
No 269
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=35.51 E-value=4.2 Score=27.73 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=18.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.||.
T Consensus 35 ~~C~~C~~~f~~~~~l~~H~~ 55 (124)
T 1ubd_C 35 HVCAECGKAFVESSKLKRHQL 55 (124)
T ss_dssp EECTTTCCEESSHHHHHHHGG
T ss_pred eECCCCCchhCCHHHHHHHHH
Confidence 469999999999999999985
No 270
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.48 E-value=4.2 Score=28.56 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=18.0
Q ss_pred HHHHHHHHHhhhhhhhhhhh
Q psy1729 135 LYCRVCDQWFTTLHNKREHL 154 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~ 154 (170)
.-|.+|+..|++..+++.|+
T Consensus 51 f~C~~Cgk~F~~~~~L~~H~ 70 (102)
T 2ghf_A 51 YVCVECNFLTKRYDALSEHN 70 (102)
T ss_dssp EEETTTTEEESSTHHHHTHH
T ss_pred cCCCCCCcccCCHHHHHHHH
Confidence 45999999999999999994
No 271
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=33.23 E-value=3.6 Score=27.93 Aligned_cols=21 Identities=29% Similarity=0.594 Sum_probs=19.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhc
Q psy1729 135 LYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 135 ~~~~~~~~~f~~~h~~~~~~~ 155 (170)
.-|.+|+..|++..+++.|+.
T Consensus 26 y~C~~C~k~F~~~~~L~~H~~ 46 (88)
T 1x6f_A 26 YQCKHCDSKLQSTAELTSHLN 46 (88)
T ss_dssp EECSSSCCEESSHHHHHHHHH
T ss_pred CcCCCCCCEeCCHHHHHHHHH
Confidence 569999999999999999984
No 272
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=32.73 E-value=3.7 Score=25.44 Aligned_cols=22 Identities=14% Similarity=0.365 Sum_probs=18.6
Q ss_pred hHHHHH--HHHHhhhhhhhhhhhc
Q psy1729 134 ELYCRV--CDQWFTTLHNKREHLN 155 (170)
Q Consensus 134 ~~~~~~--~~~~f~~~h~~~~~~~ 155 (170)
...|.. |+..|++..+++.||.
T Consensus 17 ~~~C~~~~C~k~f~~~~~L~~H~~ 40 (72)
T 2epa_A 17 SHICSHPGCGKTYFKSSHLKAHTR 40 (72)
T ss_dssp CEECSSTTTCCEESSHHHHHHHHH
T ss_pred ceeCCCCCCccccCCHHHHHHHHH
Confidence 345777 9999999999999984
No 273
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=32.59 E-value=2.7 Score=25.61 Aligned_cols=16 Identities=19% Similarity=0.704 Sum_probs=13.3
Q ss_pred CchhHHHHHHHHHhhh
Q psy1729 131 DNEELYCRVCDQWFTT 146 (170)
Q Consensus 131 ~~~~~~~~~~~~~f~~ 146 (170)
+--+|||-.|+++|.+
T Consensus 8 ~~~yl~CE~C~~~~~~ 23 (39)
T 2l9z_A 8 TLFTIWCTLCDRAYPS 23 (39)
T ss_dssp CSCSEEEGGGTEEESS
T ss_pred hhhhhHHHHHhhhchh
Confidence 3468999999999875
No 274
>2xv9_A ABA-1A1 repeat UNIT; lipid binding protein, fatty acid binding, retinol binding,; NMR {Ascaris suum}
Probab=32.11 E-value=1.6e+02 Score=22.02 Aligned_cols=68 Identities=13% Similarity=0.094 Sum_probs=48.7
Q ss_pred cCCCCCHHHHHHHHHHHhcCCChHHHHhHHHHHHHHHHHHHHHH--------------------hhhhhHHHHhhCCChh
Q psy1729 7 KMISTTKLLVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREEL--------------------KVTKLLGNEWSKLSLP 66 (170)
Q Consensus 7 ~~p~~s~~evsK~lge~Wk~Lse~EK~~Ye~~Ak~dKerY~~Em--------------------Ei~K~lg~~Wk~LS~~ 66 (170)
+-.+.|..+|.+.|.+-+-.|+.+.|.........-=..|.+.+ ++...+.+.-..++++
T Consensus 33 k~~gksk~~v~~KI~efye~l~gd~K~~a~e~L~~~C~~~lk~iiG~e~~~eLk~m~~sg~~~e~l~~Kv~e~i~~i~dE 112 (134)
T 2xv9_A 33 KKDGKAKKELEAKILHYYDELEGDAKKEATEHLKGGCREILKHVVGEEKAAELKNLKDSGASKEELKAKVEEALHAVTDE 112 (134)
T ss_dssp HHTTCCHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCCH
T ss_pred HHcCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhcH
Confidence 33567899999999999999999999988775554333332221 4555566667788888
Q ss_pred hhhhhHHH
Q psy1729 67 EKKVYLDR 74 (170)
Q Consensus 67 EK~~Y~~~ 74 (170)
+++.+.+.
T Consensus 113 ~kk~~ae~ 120 (134)
T 2xv9_A 113 EKKQYIAD 120 (134)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777654
No 275
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=31.55 E-value=3.4 Score=29.44 Aligned_cols=26 Identities=27% Similarity=0.437 Sum_probs=20.6
Q ss_pred cCchhHHHHHHHHHhhhhhhhhhhhc
Q psy1729 130 EDNEELYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 130 ~~~~~~~~~~~~~~f~~~h~~~~~~~ 155 (170)
+++...-|..|+..|++..+++.||.
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~ 46 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVT 46 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHH
T ss_pred hhhcccccccCCcccCCHHHHHHHHH
Confidence 34456778999999999999998875
No 276
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=30.88 E-value=4.4 Score=25.40 Aligned_cols=17 Identities=18% Similarity=0.354 Sum_probs=12.2
Q ss_pred HHHHHHhhhhhhhhhhh
Q psy1729 138 RVCDQWFTTLHNKREHL 154 (170)
Q Consensus 138 ~~~~~~f~~~h~~~~~~ 154 (170)
..|+..|++..+++.|+
T Consensus 7 ~~C~~~f~~~~~l~~H~ 23 (85)
T 2j7j_A 7 ENCGKAFKKHNQLKVHQ 23 (85)
T ss_dssp TTCCCEESSHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHH
Confidence 56777777777777776
No 277
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=29.72 E-value=13 Score=27.36 Aligned_cols=23 Identities=22% Similarity=0.441 Sum_probs=11.0
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhc
Q psy1729 133 EELYCRVCDQWFTTLHNKREHLN 155 (170)
Q Consensus 133 ~~~~~~~~~~~f~~~h~~~~~~~ 155 (170)
...-|..|+..|++..+++.||.
T Consensus 20 ~~~~C~~C~~~f~~~~~l~~H~~ 42 (190)
T 2i13_A 20 KPYACPECGKSFSRSDHLAEHQR 42 (190)
T ss_dssp -----------CCSSHHHHHGGG
T ss_pred CCCcCCCCccccCCHHHHHHHHH
Confidence 45789999999999999999985
No 278
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=27.79 E-value=4.1 Score=36.04 Aligned_cols=31 Identities=26% Similarity=0.419 Sum_probs=27.1
Q ss_pred HHHHHHHH------Hhhhhhhhhhhhchhhhhhhhcc
Q psy1729 135 LYCRVCDQ------WFTTLHNKREHLNGRQHFQRFDR 165 (170)
Q Consensus 135 ~~~~~~~~------~f~~~h~~~~~~~~~~~~~~~~~ 165 (170)
-+|-+|+- -+-.-++-.-|+.||.|..++.+
T Consensus 361 ~~Ce~C~~~~~~~~~~~ge~~W~~H~ksr~Hk~~~~~ 397 (409)
T 3eph_A 361 YTCNVCRNADGKNVVAIGEKYWKIHLGSRRHKSNLKR 397 (409)
T ss_dssp EEEEEEECTTSCEEEEESHHHHHHHHTSHHHHHHHHH
T ss_pred eeCCCCCCCCCCcceEEcHHHHHHHhhhhHHHHHHHH
Confidence 36999997 68888999999999999998765
No 279
>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A
Probab=23.54 E-value=1.5e+02 Score=22.28 Aligned_cols=33 Identities=12% Similarity=0.274 Sum_probs=24.2
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHHHHHHHHHHHHHHHH
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAEVDKKRYREELKVYR 90 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~~dk~rY~~em~~yk 90 (170)
+.++.-.+.++-|++++|..|.+ .+.+-|..+.
T Consensus 107 ~r~k~~~qiy~vLTPEQk~ql~e-------~~~~r~~~~~ 139 (145)
T 3itf_A 107 EMAKVRNQMYRLLTPEQQAVLNE-------KHQQRMEQLR 139 (145)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHH-------HHHHHHHHTT
T ss_pred HHHHHHHHHHhhCCHHHHHHHHH-------HHHHHHHHHH
Confidence 45666778899999999999987 4455555544
No 280
>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}
Probab=21.40 E-value=91 Score=22.30 Aligned_cols=26 Identities=15% Similarity=0.123 Sum_probs=21.2
Q ss_pred hhhhhHHHHhhCCChhhhhhhHHHHH
Q psy1729 51 KVTKLLGNEWSKLSLPEKKVYLDRAE 76 (170)
Q Consensus 51 Ei~K~lg~~Wk~LS~~EK~~Y~~~A~ 76 (170)
+.++.-.+.++-|+|++|+.|.+..+
T Consensus 79 ~~~r~~~qmy~lLTPEQk~q~~~~~~ 104 (108)
T 3o39_A 79 AHMETQNKIYNILTPEQKKQFNANFE 104 (108)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 56677778899999999999987543
No 281
>2hpg_A ABC transporter, periplasmic substrate-binding protein; periplasmic binding protein, thermophilic proteins, trap- transport; HET: MSE; 1.90A {Thermotoga maritima}
Probab=21.28 E-value=93 Score=25.53 Aligned_cols=57 Identities=12% Similarity=0.087 Sum_probs=37.1
Q ss_pred HHhcCCChHHHHhHHHHHHHHH----HHHH-H----HHhhhhhHHHHhhCCChhhhhhhHHHHHHH
Q psy1729 22 NEWSKLSLPEKKVYLDRAEVDK----KRYR-E----ELKVTKLLGNEWSKLSLPEKKVYLDRAEVD 78 (170)
Q Consensus 22 e~Wk~Lse~EK~~Ye~~Ak~dK----erY~-~----EmEi~K~lg~~Wk~LS~~EK~~Y~~~A~~d 78 (170)
..|..||++.++.+.+.+.+.- ..+. . .++.++.-|-....+|+.++..|.+.++..
T Consensus 236 ~~~~~L~~e~q~~i~~a~~~a~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~a~~~v 301 (327)
T 2hpg_A 236 DWFNSLPKEYQKIIEEEMDKAGIEVSLKIMKELEEEYKQKCIEKGMAVIPASEIDKEAFMEKAKQA 301 (327)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCEEECGGGSCHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEeCChhhHHHHHHHHHHH
Confidence 5799999999999988665432 2233 1 123333345456677888898888876543
No 282
>3nm8_A Tyrosinase; TYPE3 copper proteins, oxidoreductase; 2.00A {Bacillus megaterium} PDB: 3npy_A 3nq0_A 3nq1_A* 3ntm_A 4d87_A* 3nq5_A
Probab=21.25 E-value=34 Score=28.79 Aligned_cols=25 Identities=16% Similarity=0.186 Sum_probs=18.2
Q ss_pred HHHHhhCCChhhhhhhHHHHHHHHH
Q psy1729 56 LGNEWSKLSLPEKKVYLDRAEVDKK 80 (170)
Q Consensus 56 lg~~Wk~LS~~EK~~Y~~~A~~dk~ 80 (170)
+.+.|..||.+||..|++.....+.
T Consensus 7 VRke~~~Ls~~Er~~yi~Av~~l~~ 31 (303)
T 3nm8_A 7 VRKNVLHLTDTEKRDFVRTVLILKE 31 (303)
T ss_dssp EECBGGGCCHHHHHHHHHHHHHHHH
T ss_pred eecchHHCCHHHHHHHHHHHHHHHh
Confidence 4456888888888888886665554
No 283
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=20.46 E-value=1.9e+02 Score=20.45 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhcCCC---hHHHHhHHHHHHHHHHHHHHHHh
Q psy1729 13 KLLVTKLLGNEWSKLS---LPEKKVYLDRAEVDKKRYREELK 51 (170)
Q Consensus 13 ~~evsK~lge~Wk~Ls---e~EK~~Ye~~Ak~dKerY~~EmE 51 (170)
+.+-+..|...|.+|+ +.++.+|.+........|...++
T Consensus 25 Lq~~~~~L~~~f~~L~sWqDqkr~kFee~fe~l~s~l~~f~e 66 (94)
T 3fx7_A 25 LREEVNSLSNHFHNLESWRDARRDKFSEVLDNLKSTFNEFDE 66 (94)
T ss_dssp HHHHHHHHHHHHHHCCSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccchHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677888999997 78899999999998888876553
Done!