Query psy17297
Match_columns 456
No_of_seqs 177 out of 1347
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 18:21:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17297.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17297hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 3E-123 1E-127 954.4 30.3 434 1-434 1-445 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 3E-123 9E-128 953.7 28.9 434 1-434 1-435 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 1E-112 5E-117 885.0 32.4 448 1-450 2-463 (475)
4 2btq_B Tubulin btubb; structur 100.0 7E-110 2E-114 858.2 25.8 421 1-424 1-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 1E-108 4E-113 857.4 28.2 427 1-431 3-437 (473)
6 1w5f_A Cell division protein F 100.0 3.9E-43 1.3E-47 351.8 13.8 299 1-370 21-327 (353)
7 2vap_A FTSZ, cell division pro 100.0 6.3E-43 2.1E-47 350.9 13.1 295 3-370 39-339 (364)
8 2r75_1 Cell division protein F 100.0 4.4E-43 1.5E-47 350.4 9.1 297 3-371 9-312 (338)
9 1ofu_A FTSZ, cell division pro 100.0 3.8E-42 1.3E-46 341.5 15.2 297 3-369 13-314 (320)
10 2vaw_A FTSZ, cell division pro 100.0 8.5E-42 2.9E-46 345.6 16.2 299 2-370 12-315 (394)
11 1rq2_A Cell division protein F 100.0 2.7E-42 9.3E-47 347.9 10.9 298 2-370 12-314 (382)
12 2vxy_A FTSZ, cell division pro 100.0 1.5E-41 5.3E-46 342.5 14.5 298 2-370 12-314 (382)
13 3m89_A FTSZ/tubulin-related pr 100.0 2.1E-36 7.3E-41 304.0 12.7 273 4-320 45-351 (427)
14 3v3t_A Cell division GTPase FT 100.0 7.4E-30 2.5E-34 252.3 12.1 193 4-254 7-205 (360)
15 4dxd_A Cell division protein F 100.0 8.3E-30 2.8E-34 254.4 12.2 266 4-334 20-290 (396)
16 4ei7_A Plasmid replication pro 99.7 3.8E-17 1.3E-21 165.9 11.4 339 4-391 18-380 (389)
17 3r4v_A Putative uncharacterize 99.0 2.6E-10 8.9E-15 108.8 5.7 171 3-237 4-177 (315)
18 2e4h_B Tubulin alpha-ubiquitou 96.8 0.00084 2.9E-08 43.9 3.0 26 405-430 1-26 (36)
19 3bed_A PTS system, IIA compone 66.0 5 0.00017 34.0 3.9 31 111-142 44-74 (142)
20 1pdo_A Mannose permease; phosp 56.0 26 0.00088 29.1 6.6 31 112-142 41-71 (135)
21 3lfh_A Manxa, phosphotransfera 54.9 10 0.00035 32.2 3.8 39 112-150 43-82 (144)
22 2nx2_A Hypothetical protein YP 51.9 57 0.002 28.6 8.4 113 111-239 24-138 (181)
23 3g7n_A Lipase; hydrolase fold, 50.5 12 0.00041 35.0 3.9 70 102-176 97-166 (258)
24 3gx1_A LIN1832 protein; APC633 49.8 25 0.00084 29.2 5.4 39 111-151 43-81 (130)
25 3ipr_A PTS system, IIA compone 48.4 16 0.00053 31.2 4.0 32 112-143 41-72 (150)
26 3mtq_A Putative phosphoenolpyr 45.8 10 0.00035 32.9 2.4 31 113-143 61-91 (159)
27 3uue_A LIP1, secretory lipase 38.1 26 0.0009 33.0 4.2 70 102-176 111-180 (279)
28 3gdw_A Sigma-54 interaction do 36.0 44 0.0015 28.0 4.8 39 111-151 43-83 (139)
29 3b48_A Uncharacterized protein 32.3 21 0.00073 29.7 2.2 28 114-142 49-76 (135)
30 3o0d_A YALI0A20350P, triacylgl 32.0 31 0.0011 32.9 3.6 61 102-166 127-187 (301)
31 3ct6_A PTS-dependent dihydroxy 30.4 34 0.0012 28.5 3.1 27 114-142 44-70 (131)
32 2p10_A MLL9387 protein; putati 29.8 22 0.00074 33.8 2.0 34 112-153 13-46 (286)
33 1tia_A Lipase; hydrolase(carbo 29.8 42 0.0014 31.5 4.1 53 101-157 109-161 (279)
34 1uwc_A Feruloyl esterase A; hy 29.4 36 0.0012 31.6 3.5 51 102-156 98-148 (261)
35 3ngm_A Extracellular lipase; s 25.3 43 0.0015 32.3 3.3 61 102-166 109-169 (319)
36 3ff5_A PEX14P, peroxisomal bio 24.7 24 0.00081 24.8 0.9 23 387-412 30-52 (54)
37 2aot_A HMT, histamine N-methyl 22.2 1.5E+02 0.0053 27.1 6.6 59 112-171 33-91 (292)
38 1ujp_A Tryptophan synthase alp 22.2 1.1E+02 0.0036 28.7 5.3 72 117-209 158-235 (271)
39 2w84_A Peroxisomal membrane pr 22.0 28 0.00097 25.7 0.9 25 387-414 35-59 (70)
40 3f1i_H Hepatocyte growth facto 21.0 47 0.0016 26.0 2.0 53 367-424 30-91 (98)
41 2ekc_A AQ_1548, tryptophan syn 20.3 1.3E+02 0.0046 27.6 5.6 73 117-209 161-240 (262)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=3.4e-123 Score=954.42 Aligned_cols=434 Identities=40% Similarity=0.750 Sum_probs=414.0
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcch--hccccccccccC-CCcccceeEEeCCCCCeeccccc
Q psy17297 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDL--QLERIQVYYNEA-QGGYIPRAILVDLEPGTMDAVRS 77 (456)
Q Consensus 1 M~EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~F~e~-~~~~~pR~l~vD~e~~~i~~i~~ 77 (456)
|||||+||+||||||||++||+++|.||+|+++|.+.++++. ..+++++||+|+ .++|+||||+|||||++|++++.
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 999999999999999999999999999999999998766543 467889999999 89999999999999999999999
Q ss_pred cCCCcccCCCceeeccCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhh
Q psy17297 78 GPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREE 157 (456)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~de 157 (456)
++++.+|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||+||||+++||+|||||||+|+.|+|.|+++
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~e 160 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCc
Q psy17297 158 YPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITT 237 (456)
Q Consensus 158 yp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~ 237 (456)
||++++++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|.
T Consensus 161 y~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 240 (451)
T 3ryc_A 161 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
T ss_dssp TTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhccccccc
Confidence 99999999999999878999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeeccc
Q psy17297 238 CLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIFR 317 (456)
Q Consensus 238 ~~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 317 (456)
++||||++|.|+++|.+||||||++||++++|+|+++..+..++++++.+|++++|+++|+|++|+|++|+|||+++++|
T Consensus 241 slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 320 (451)
T 3ryc_A 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320 (451)
T ss_dssp HHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcc
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred ccCChHHHHHHHhhhccCCCCceeeeccCceeeeeecCCCC--------CCceeEEEeecCcccHHHHHHHHHHHhhccc
Q psy17297 318 GELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPK--------GFKMSGTFIGNTTAIQGLFQRIMDQFCSMFR 389 (456)
Q Consensus 318 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~--------~~~~s~~~l~Nst~i~~~l~~l~~~~~~m~~ 389 (456)
|++.++++.+.+.+++.+++++|++|+|++||+++|.+||. +..+++++|+|+|+|.+.|+++.++|++||+
T Consensus 321 G~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~ 400 (451)
T 3ryc_A 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 400 (451)
T ss_dssp ESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999997 5679999999999999999999999999999
Q ss_pred cccchhhhccCCCChhhHHHHHHHHHHHHHHHHHHhhcCcccccc
Q psy17297 390 RKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVE 434 (456)
Q Consensus 390 krAflH~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~~~~~~~~~~~ 434 (456)
||||||||++|||||+||.||+++|++|+++|++++.+..|+|+|
T Consensus 401 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~ 445 (451)
T 3ryc_A 401 KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGE 445 (451)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred cceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 999999999999999999999999999999999999887654443
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=2.8e-123 Score=953.66 Aligned_cols=434 Identities=73% Similarity=1.254 Sum_probs=422.1
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccC-CCcccceeEEeCCCCCeeccccccC
Q psy17297 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEA-QGGYIPRAILVDLEPGTMDAVRSGP 79 (456)
Q Consensus 1 M~EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~-~~~~~pR~l~vD~e~~~i~~i~~~~ 79 (456)
|||||+||+||||||||.+||+++|.||+|+++|.+.++++...+++++||+|+ .++|+||||+|||||++|++++.++
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~g~ 80 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGP 80 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTHHHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHTST
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccccccchhhccccCCCCccccceeEecCCchhhhhhhccc
Confidence 999999999999999999999999999999999999887777778899999999 8999999999999999999999999
Q ss_pred CCcccCCCceeeccCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhCC
Q psy17297 80 YGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYP 159 (456)
Q Consensus 80 ~~~~~~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~deyp 159 (456)
++.+|+|++++++++|+|||||+|||+.|+++.|.++|+||+++|+||.||||+++||+|||||||+|+.|+|.|+++||
T Consensus 81 ~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~ 160 (445)
T 3ryc_B 81 FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160 (445)
T ss_dssp TGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCT
T ss_pred ccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCccc
Q psy17297 160 DRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCL 239 (456)
Q Consensus 160 ~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~~~ 239 (456)
++.+++++|+|++..++++++|||++|++++|.|++|+++++||++|+++|.+.+++..|+|.++|++||++++++|.++
T Consensus 161 kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~sl 240 (445)
T 3ryc_B 161 DRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240 (445)
T ss_dssp TSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhcccc
Confidence 99999999999977889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeeccccc
Q psy17297 240 RFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIFRGE 319 (456)
Q Consensus 240 r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG~ 319 (456)
||||++|.|+.+|.+||||||++||++++++|+++..+..++++++.++++++|+++++|.+|||++|+|+|+++++||+
T Consensus 241 Rf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~RG~ 320 (445)
T 3ryc_B 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFRGR 320 (445)
T ss_dssp HSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEEES
T ss_pred ccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeeecC
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHhhhccCCCCceeeeccCceeeeeecCCCCCCceeEEEeecCcccHHHHHHHHHHHhhccccccchhhhcc
Q psy17297 320 LSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGFKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTV 399 (456)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~~~~~s~~~l~Nst~i~~~l~~l~~~~~~m~~krAflH~Y~~ 399 (456)
+.++++...+.+++.+++++|++|+|+++++++|++||.+.++++++|+|+|+|.+.|+++.++|++||+||||||||++
T Consensus 321 v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~~~~s~~~lsNsTaI~~~~~rl~~kFd~m~~krAFvHwY~~ 400 (445)
T 3ryc_B 321 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 400 (445)
T ss_dssp CCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTTCSEEEEEEEEEGGGHHHHHHHHHHHHHHHTTTTTTHHHHT
T ss_pred CChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCcccceeeeeecCcHHHHHHHHHHHHHHHhhhhcccchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHhhcCcccccc
Q psy17297 400 EGMDEFEFHEAGANVEDLICEYQQYQEASIEDTVE 434 (456)
Q Consensus 400 ~Gmee~eF~Ea~~~l~~l~~~Y~~~~~~~~~~~~~ 434 (456)
|||||+||.||+++|++|+++|++++....|+++|
T Consensus 401 eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~ 435 (445)
T 3ryc_B 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATADEQGE 435 (445)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC---
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Confidence 99999999999999999999999998887665443
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=1.4e-112 Score=884.97 Aligned_cols=448 Identities=34% Similarity=0.663 Sum_probs=407.0
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccC-CCcccceeEEeCCCCCeeccccccC
Q psy17297 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEA-QGGYIPRAILVDLEPGTMDAVRSGP 79 (456)
Q Consensus 1 M~EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~-~~~~~pR~l~vD~e~~~i~~i~~~~ 79 (456)
|||||+||+||||||||++||+++|.||+++++|.+.++.....+++++||+|+ .++|+||||+|||||++++.++.++
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~~~ 81 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFATEGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILNSP 81 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCCTTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHHST
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCcccccccccceeeeecCCCceecceeEecCCcceeeeecccc
Confidence 799999999999999999999999999999999987654444557889999999 8999999999999999999999999
Q ss_pred CCcccCCCceeeccC--CcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhh
Q psy17297 80 YGKMFRPDNFLHGQS--GAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREE 157 (456)
Q Consensus 80 ~~~~~~~~~~~~~~~--~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~de 157 (456)
++.+|+|++++.+++ |+||||++|| +.|++..|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|+
T Consensus 82 ~~~lf~p~~~i~g~~g~gAgnn~a~G~-~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~de 160 (475)
T 3cb2_A 82 YAKLYNPENIYLSEHGGGAGNNWASGF-SQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDR 160 (475)
T ss_dssp TTTTSCGGGEEECCTTCCCTTCHHHHH-HHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHH
T ss_pred ccccCCccceeecccccCCCCCchhhh-hhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHH
Confidence 999999999999987 7999999995 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeEEEEEecCCC-CCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCC
Q psy17297 158 YPDRMINAFSVVPSPK-VSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGIT 236 (456)
Q Consensus 158 yp~~~i~~~~v~P~~~-~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t 236 (456)
||++.+++++|+|++. .++.++++||++|++++|.+++|++|+++|++|+++|.+.+++..|+|.++|++||++++++|
T Consensus 161 y~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~iT 240 (475)
T 3cb2_A 161 YPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSAST 240 (475)
T ss_dssp STTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHT
T ss_pred cCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccccc
Confidence 9999999999999964 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcc-cccccCCHHHHHHhhhccCccccccCCC---CCceeee
Q psy17297 237 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSL-IDYKAMSIGELTQELFDAKNMMVACDPR---HGKYLTV 312 (456)
Q Consensus 237 ~~~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~-~~~~~~t~~~l~~~~~~~~~~~~~~~~~---~~~~ls~ 312 (456)
.++||||.+|.|++++.++|||||++||++++++|+++..+ ..++++++.++++++|+++|+|++|+|+ .|+|+|+
T Consensus 241 ~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyla~ 320 (475)
T 3cb2_A 241 TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAI 320 (475)
T ss_dssp TTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEEEE
T ss_pred cccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchhhh
Confidence 99999999999999999999999999999999999999877 7789999999999999999999999999 9999999
Q ss_pred eecccccCChHHHHHHHhhhccCCCCceeeeccCceeeeeecCCCC---CCceeEEEeecCcccHHHHHHHHHHHhhccc
Q psy17297 313 ATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPK---GFKMSGTFIGNTTAIQGLFQRIMDQFCSMFR 389 (456)
Q Consensus 313 ~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~---~~~~s~~~l~Nst~i~~~l~~l~~~~~~m~~ 389 (456)
++++||++.++++.+.+.+++.+++++|++|+|+++++++|.++|. +.+.++++|+|+|+|.+.|+++.++|++||+
T Consensus 321 ~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~~~~s~~~lsN~TaI~~~f~ri~~kfd~m~~ 400 (475)
T 3cb2_A 321 LNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGLMMANHTSISSLFERTCRQYDKLRK 400 (475)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC-----CCEEEEEEEEGGGHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCCcceEEEEecCChHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999997 5678999999999999999999999999999
Q ss_pred cccchhhhccCCCCh---hhHHHHHHHHHHHHHHHHHHhhcCccccccccCCccccccCCcCCC
Q psy17297 390 RKAFLHWYTVEGMDE---FEFHEAGANVEDLICEYQQYQEASIEDTVEIATSDDEKGDHRIKPE 450 (456)
Q Consensus 390 krAflH~Y~~~Gmee---~eF~Ea~~~l~~l~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (456)
||||||||+++|||| +||.||+++|++|+++|++++.+.+.+.+. +++.|++++..+-.|
T Consensus 401 rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 463 (475)
T 3cb2_A 401 REAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRPDYISWGT-QEQVDVDGGQKLISE 463 (475)
T ss_dssp TTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSGGGSCC------------------
T ss_pred cccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhccccCccc-cccccccccccccch
Confidence 999999999999987 999999999999999999998776655333 555666666665444
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=7.2e-110 Score=858.24 Aligned_cols=421 Identities=38% Similarity=0.735 Sum_probs=378.1
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCc-chhccccccccccC-CCcccceeEEeCCCCCeecccccc
Q psy17297 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTS-DLQLERIQVYYNEA-QGGYIPRAILVDLEPGTMDAVRSG 78 (456)
Q Consensus 1 M~EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~-~~~~~~~~~~F~e~-~~~~~pR~l~vD~e~~~i~~i~~~ 78 (456)
|||||+||+||||||||++||+++|.||+++++|.+.+++ +...+++++||+|+ .++|+||+|+||+||++++.++.+
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~~ 80 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSNAAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEGG 80 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC-------CCCTTTEEEEETTEEEECEEEEEECC---------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCcccccccccccceeeecCCCceeeeeEEEecCcccccccccc
Confidence 9999999999999999999999999999999999887654 44567889999999 899999999999999999999999
Q ss_pred CCCcccCCCceeeccCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhC
Q psy17297 79 PYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEY 158 (456)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~dey 158 (456)
+++.+|+|++++.+++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|+|
T Consensus 81 ~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y 160 (426)
T 2btq_B 81 DMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAY 160 (426)
T ss_dssp ---CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTC
T ss_pred ccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCcc
Q psy17297 159 PDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTC 238 (456)
Q Consensus 159 p~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~~ 238 (456)
|++.+++++|+|++..++.++++||++|++++|.+++|++|++||++|+++|.+.++ ..++|.++|++||++++++|.+
T Consensus 161 ~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~~ 239 (426)
T 2btq_B 161 PKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTAS 239 (426)
T ss_dssp TTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhhh
Confidence 999999999999977789999999999999999999999999999999999999998 7899999999999999999999
Q ss_pred ccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeecccc
Q psy17297 239 LRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIFRG 318 (456)
Q Consensus 239 ~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG 318 (456)
+||||.+|.|+.++.++|+|||++||++++++|+++.....++..++.++++++|+++++|..|+|++|+|+|+++++||
T Consensus 240 lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~rG 319 (426)
T 2btq_B 240 LRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFRG 319 (426)
T ss_dssp HHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEEC
T ss_pred ccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHcC
Confidence 99999999999999999999999999999999999988888899999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHhhhccCCCCceeeecc--CceeeeeecCCCCCCceeEEEeecCcccHHHHHHHHHHHhhccccccchhh
Q psy17297 319 ELSVKEIDDHIVNIHNNNLPYYVEWIP--NNIKTALCDIAPKGFKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHW 396 (456)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~f~~w~p--~~~~~~~~~~~p~~~~~s~~~l~Nst~i~~~l~~l~~~~~~m~~krAflH~ 396 (456)
++.++++.+.+..+ +++++|++|+| +++++++|+++|.+.+.++++|+|+|+|.+.|+++.++|++||+|||||||
T Consensus 320 ~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~~~~s~~~lsNstaI~~~~~~~~~~f~~m~~rrAflh~ 397 (426)
T 2btq_B 320 DVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEGFASSGLALVNHTGIAAVFERLIAQFDIMFDNHAYTHW 397 (426)
T ss_dssp C----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTTCSSBCCEEEEEGGGHHHHHHHHHHHHHHHHTTSSHHH
T ss_pred CCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCCCcceeEEecCChHHHHHHHHHHHHHHHHhhcccchhh
Confidence 99999999888888 67799999999 999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCChhhHHHHHHHHHHHHHHHHHH
Q psy17297 397 YTVEGMDEFEFHEAGANVEDLICEYQQY 424 (456)
Q Consensus 397 Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~ 424 (456)
|++|||||+||.||+++|++|+++|+++
T Consensus 398 Y~~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 398 YENAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp HHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999876
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=1.1e-108 Score=857.37 Aligned_cols=427 Identities=34% Similarity=0.678 Sum_probs=394.1
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHHcCCCCC-CCCCCCcchhccccccccc---cC-CCcccceeEEeCCCCCeeccc
Q psy17297 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEM-GRYEGTSDLQLERIQVYYN---EA-QGGYIPRAILVDLEPGTMDAV 75 (456)
Q Consensus 1 M~EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~F~---e~-~~~~~pR~l~vD~e~~~i~~i 75 (456)
|||||+||+||||||||++||+++|.||+++++ |.+.++++. .+++++||+ |+ .++|+||+|+|||||++++.+
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~~-~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~~i 81 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVAP-RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVIDNV 81 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCCC-SSSGGGTEEECSCC--CCEEECEEEEESSSHHHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCcc-cccccceecccccccCCceeeeeeEecCcchhhhhh
Confidence 999999999999999999999999999999999 888765544 678899999 98 889999999999999999999
Q ss_pred cccCCCcccCCCceeeccCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHH
Q psy17297 76 RSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIR 155 (456)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~ 155 (456)
+.++ +.+|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+
T Consensus 82 ~~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~ 160 (473)
T 2bto_A 82 KATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLK 160 (473)
T ss_dssp HHHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred hccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHH
Confidence 9888 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccC
Q psy17297 156 EEYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGI 235 (456)
Q Consensus 156 deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~ 235 (456)
|+||++.+++++|+|++..+++++++||++|++++|.+++|++|+++|++|+++|.+.+++..++|.++|++||++++++
T Consensus 161 e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~~i 240 (473)
T 2bto_A 161 EKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALAGI 240 (473)
T ss_dssp HHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcccc
Confidence 99999999999999997778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCcchh--HHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeee
Q psy17297 236 TTCLRFPGQLNAD--LRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVA 313 (456)
Q Consensus 236 t~~~r~~~~~n~~--l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~ 313 (456)
|.++||||.+|.| +.++.++|||||++||++++++|+++.....++..++.++++++|+++++|..|+|+.|+|++++
T Consensus 241 t~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla~~ 320 (473)
T 2bto_A 241 TASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLSTA 320 (473)
T ss_dssp HHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEEEE
T ss_pred hhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHHHH
Confidence 9999999999999 99999999999999999999999999888888999999999999999999999999999999999
Q ss_pred ecccccCChHHH-HHHHhhhccCCCCceeeeccCceeeeeecCCCCCCceeEEEeecCcccHHHHHHHHHHHhhcccccc
Q psy17297 314 TIFRGELSVKEI-DDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGFKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKA 392 (456)
Q Consensus 314 ~~~RG~~~~~~~-~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~~~~~s~~~l~Nst~i~~~l~~l~~~~~~m~~krA 392 (456)
+++||++.++++ .+.+..++.+.+++| |+|+++++++|.++|.+.++++++|+|+|+|.+.|+++.++|++||+|||
T Consensus 321 ~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~g~~~s~~~lsNsTaI~~~~~~l~~kf~~m~~rrA 398 (473)
T 2bto_A 321 VLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGISHRKSMVLLANNTEIARVLDRICHNFDKLWQRKA 398 (473)
T ss_dssp EEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCSSCSEEEEEEEEETTHHHHHHHHHHHHHHHHTTTT
T ss_pred HhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCcCcceeEEEecCCchHHHHHHHHHHHHHHHhhhcc
Confidence 999999999999 999999998888999 99999999999999999999999999999999999999999999999999
Q ss_pred chhhhccCCCChhhHHHHHHHHHHHHHHHHHHhhcCccc
Q psy17297 393 FLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEASIED 431 (456)
Q Consensus 393 flH~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~~~~~~~~ 431 (456)
|||||+++||||+||.||+++|++|+++|+++..+..|+
T Consensus 399 flH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~~~~~ 437 (473)
T 2bto_A 399 FANWYLNEGMSEEQINVLRASAQELVQSYQVAEESGAKA 437 (473)
T ss_dssp THHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred hhHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999997665433
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=3.9e-43 Score=351.78 Aligned_cols=299 Identities=17% Similarity=0.207 Sum_probs=247.0
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCC
Q psy17297 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPY 80 (456)
Q Consensus 1 M~EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~ 80 (456)
|++|++|++|||||++++++|+ |+++ + .+.+++|++.+.++.++.
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~-----~gi~--g-------------------------v~~ia~nTD~q~L~~~~a--- 65 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIE-----IGIH--G-------------------------VEFVAVNTDLQVLEASNA--- 65 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHH-----HCCT--T-------------------------EEEEEEESCHHHHHTCCC---
T ss_pred CCEEEEECcCchHHHHHHHHHH-----hCCC--C-------------------------CCEEEEcCCHHHHhcCCC---
Confidence 5689999999999999999997 4432 0 355888887776544321
Q ss_pred CcccCCCceeec-----cCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHH
Q psy17297 81 GKMFRPDNFLHG-----QSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIR 155 (456)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~ 155 (456)
|+.+..+ ..|+||||+. |++..++.+|+||+.+|.|| +|+|+||+|||||||+|+.|++.++
T Consensus 66 -----~~~i~iG~~~t~G~GAG~n~~~-----G~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~~~k 132 (353)
T 1w5f_A 66 -----DVKIQIGENITRGLGAGGRPEI-----GEQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAKIAK 132 (353)
T ss_dssp -----SEEEECCTTTTTTSCCTTCHHH-----HHHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHH
T ss_pred -----CcEEEccCcccCCCCCCCChHH-----HHHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHHHHH
Confidence 3344443 4599999995 57889999999999999998 5899999999999999999999999
Q ss_pred hhCCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccC
Q psy17297 156 EEYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGI 235 (456)
Q Consensus 156 deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~ 235 (456)
+ |+ +++++|+|.|...|..+++||+.+++++|.+++|.+|++||++|+++|.+.+.+. ++|.++|++|++.++++
T Consensus 133 e-~g---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v~~i 207 (353)
T 1w5f_A 133 E-MG---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGVKGI 207 (353)
T ss_dssp H-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHHHHH
T ss_pred H-hC---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHhcCc
Confidence 7 65 4445555444456888999999999999999999999999999999998888876 58999999999999999
Q ss_pred CccccCCCCcch--hHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeee
Q psy17297 236 TTCLRFPGQLNA--DLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVA 313 (456)
Q Consensus 236 t~~~r~~~~~n~--~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~ 313 (456)
|.++|+||.+|. |++++.++|+| |+++++..+.+.- ..+..+++++.++ +.+..++++.++++.++
T Consensus 208 t~~ir~pG~iNv~~D~~dv~t~L~~-~g~a~~g~g~a~g---------~~~v~ea~~~a~~--~~ll~~d~~~ak~~l~~ 275 (353)
T 1w5f_A 208 SELITKRGYIRLTSRFARIESVMKD-AGAAILGIGVGKG---------EHRAREAAKKAME--SKLIEHPVENASSIVFN 275 (353)
T ss_dssp HHHHHCCCCCCHHHHHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CTTCCSCGGGCSEEEEE
T ss_pred hhhccCCcccccccCHHHHHHhccC-CCeeEEEEeecCC---------cchHHHHHHHHHh--CCCcCCChhhcceeEEE
Confidence 999999999999 99999999999 9999887765421 2457888999884 44556999999999999
Q ss_pred ecccccCChHHHHHHHhhhccCCCCceeeeccCceeeeeecCCCCCC-ceeEEEeecC
Q psy17297 314 TIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGF-KMSGTFIGNT 370 (456)
Q Consensus 314 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~~~-~~s~~~l~Ns 370 (456)
+..||++.+.++.+.+..++.+... +..+..+.|..++.+. +..+++++..
T Consensus 276 i~~~~dl~~~ev~~a~~~I~~~~~~------~~~i~~G~~~d~~~~~~~v~vtviatg 327 (353)
T 1w5f_A 276 ITAPSNIRMEEVHEAAMIIRQNSSE------DADVKFGLIFDDEVPDDEIRVIFIATR 327 (353)
T ss_dssp EEECTTCCHHHHHHHHHHHHTTSCT------TSEEEEEEEECTTSCTTEEEEEEEEEC
T ss_pred EEeCCCCCHHHHHHHHHHHHHhhCC------CCcEEEEEEeCCCCCCCeEEEEEEEeC
Confidence 9999999999999999888765321 6678888888887776 6777777653
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=6.3e-43 Score=350.91 Aligned_cols=295 Identities=18% Similarity=0.239 Sum_probs=244.3
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCCc
Q psy17297 3 EIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYGK 82 (456)
Q Consensus 3 EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~~ 82 (456)
+|++|++|||||++++++|+. +++ + -..++++++.+.++.++.
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~~-----gi~--g-------------------------v~fia~NTD~q~L~~~~a----- 81 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKME-----GIE--G-------------------------AKTVAINTDAQQLIRTKA----- 81 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----TCT--T-------------------------EEEEEEESBHHHHHTSCC-----
T ss_pred eEEEEeeCchHHHHHHHHHHh-----CCC--C-------------------------CCEEEEcCcHHHHhcCCC-----
Confidence 699999999999999999983 332 0 123667776655443321
Q ss_pred ccCCCceee-----ccCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhh
Q psy17297 83 MFRPDNFLH-----GQSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREE 157 (456)
Q Consensus 83 ~~~~~~~~~-----~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~de 157 (456)
|+.+.. ...|+||||++| +++.++.+|+||+.+|.||.+ +++||+|||||||+|+.|+|.+++
T Consensus 82 ---~~ki~iG~~~t~G~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~lke- 149 (364)
T 2vap_A 82 ---DKKILIGKKLTRGLGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEISKK- 149 (364)
T ss_dssp ---SEEEECCTTTTTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHHHH-
T ss_pred ---CcEEEeccccccCCCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHHHH-
Confidence 233333 346999999987 789999999999999999988 999999999999999999999998
Q ss_pred CCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCc
Q psy17297 158 YPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITT 237 (456)
Q Consensus 158 yp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~ 237 (456)
|. +++++|+|.|...+.++++||+++++++|.+++|++|++||++|+++|. .+.+ .++|.++|++|++.++++|.
T Consensus 150 ~~---~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~it~ 224 (364)
T 2vap_A 150 IG---ALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKGLVE 224 (364)
T ss_dssp TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHHHHH
T ss_pred hC---CcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhhhhH
Confidence 83 4455555554556789999999999999999999999999999999998 7777 78999999999999999999
Q ss_pred cccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeeccc
Q psy17297 238 CLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIFR 317 (456)
Q Consensus 238 ~~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 317 (456)
++|+||.+|.|++++.++|+| |+++++..++++- ..+..+++++.++ +.+..++++.++++.+++..|
T Consensus 225 ~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--~~ll~~d~~~ak~~l~~i~~~ 292 (364)
T 2vap_A 225 LITKDGLINVDFADVKAVMNN-GGLAMIGIGESDS---------EKRAKEAVSMALN--SPLLDVDIDGATGALIHVMGP 292 (364)
T ss_dssp HHHSCCSBCCCHHHHHHHHTT-CEEEEEEEEEECS---------TTHHHHHHHHHHT--CTTCCSCGGGCCEEEEEEEEC
T ss_pred HhhcCCceeccHHHHHHhccC-CCeeEEEEEecCC---------cchHHHHHHHHHh--CcCcCcChhhcceEEEEEEeC
Confidence 999999999999999999999 9999988776531 1357888888884 566778999999999999999
Q ss_pred ccCChHHHHHHHhhhccCCCCceeeecc-CceeeeeecCCCCCCceeEEEeecC
Q psy17297 318 GELSVKEIDDHIVNIHNNNLPYYVEWIP-NNIKTALCDIAPKGFKMSGTFIGNT 370 (456)
Q Consensus 318 G~~~~~~~~~~~~~~~~~~~~~f~~w~p-~~~~~~~~~~~p~~~~~s~~~l~Ns 370 (456)
|++...++.+.+..++.+.. | .+++.+.|..+|.+.+..++++...
T Consensus 293 ~dl~~~ev~~a~~~I~~~~~-------~~a~ii~G~~~~~~~~~~v~VtvIatG 339 (364)
T 2vap_A 293 EDLTLEEAREVVATVSSRLD-------PNATIIWGATIDENLENTVRVLLVITG 339 (364)
T ss_dssp TTCCHHHHHHHHHHHHHHSC-------TTCEEEEEEEECTTCSSCEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHhcC-------CCCCEEEEEEecCCCCCeEEEEEEEeC
Confidence 99999999999988876432 3 5677888888887777778777643
No 8
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=4.4e-43 Score=350.39 Aligned_cols=297 Identities=18% Similarity=0.257 Sum_probs=251.0
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCCc
Q psy17297 3 EIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYGK 82 (456)
Q Consensus 3 EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~~ 82 (456)
.|..|++|++|+++.+++|+ +++. -++.|++|+|...++.++.
T Consensus 9 ~I~viGvGg~G~n~vn~m~~-----~~~~---------------------------gv~~ia~NTD~q~L~~~~a----- 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYE-----DGIE---------------------------GVELYAINTDVQHLSTLKV----- 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------SCEEEEEESBHHHHHTCCC-----
T ss_pred eEEEEeeCccHHHHHHHHHH-----hCCC---------------------------CceEEEEECCHHHHhcCCC-----
Confidence 48899999999999999997 2221 1677999999887665432
Q ss_pred ccCCCceeec-----cCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhh
Q psy17297 83 MFRPDNFLHG-----QSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREE 157 (456)
Q Consensus 83 ~~~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~de 157 (456)
++.+..| +.|+||||+.| +++.|+.+|+||+++|.||.+ +++||+|||||||+++. ++.|+++
T Consensus 52 ---~~ki~iG~~~t~g~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l~~e 119 (338)
T 2r75_1 52 ---PNKIQIGEKVTRGLGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKTAKE 119 (338)
T ss_dssp ---SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHHHHH
T ss_pred ---CcEEEecCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHHHHh
Confidence 3344444 48999999965 799999999999999999988 99999999999999999 6778888
Q ss_pred CCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCc
Q psy17297 158 YPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITT 237 (456)
Q Consensus 158 yp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~ 237 (456)
|| +++++|+|.|...|.++++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|.++|++|++.++++|.
T Consensus 120 ~g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~it~ 195 (338)
T 2r75_1 120 MG---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRGITS 195 (338)
T ss_dssp TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHHHHH
T ss_pred cC---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhhhhh
Confidence 97 5667777766677899999999999999999999999999999999999888887 7999999999999999999
Q ss_pred cccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeeccc
Q psy17297 238 CLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIFR 317 (456)
Q Consensus 238 ~~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 317 (456)
++||||.+|.|++++.++|+|+ .++|+..+++|- + .........++.+.+|+ .+++..+++ +++++|
T Consensus 196 ~ir~pG~iNvD~~dv~t~L~~~-g~a~~g~g~a~g---~-~r~~~a~~~ai~s~lle-~n~~~~a~~-------~l~~i~ 262 (338)
T 2r75_1 196 IVVTPAVINVDFADVRTTLEEG-GLSIIGMGEGRG---D-EKADIAVEKAVTSPLLE-GNTIEGARR-------LLVTIW 262 (338)
T ss_dssp HHHSCCSBCCCHHHHHHHHTTC-EEEEEEEEEEES---T-THHHHHHHHHHHCBSSB-SSCGGGCSE-------EEEEEE
T ss_pred hhccCCceeCCHHHhhhheeCC-ccceeeeccCCc---c-chHHHHHHHHHHhhhhc-ccchhhhhe-------EEEEEE
Confidence 9999999999999999999999 888988888872 1 11223345777888888 667777753 788899
Q ss_pred c--cCChHHHHHHHhhhccCCCCceeeeccCceeeeeecCCCCCCceeEEEeecCc
Q psy17297 318 G--ELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGFKMSGTFIGNTT 371 (456)
Q Consensus 318 G--~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~~~~~s~~~l~Nst 371 (456)
| ++..+++.+.+..++.+. + .|.++++++|..+|.+.+.++++++|.-
T Consensus 263 G~~dl~~~ev~~a~~~I~~~~-----~-~~~~i~~G~~~~~~~~~~~~vtviatg~ 312 (338)
T 2r75_1 263 TSEDIPYDIVDEVMERIHSKV-----H-PEAEIIFGAVLEPQEQDFIRVAIVATDF 312 (338)
T ss_dssp ECTTSCTTHHHHHHHHHHHHS-----C-TTCEEEEEEEECTTCCSEEEEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHhc-----C-CCCcEEEEEEeCCCCCCeEEEEEEECCC
Confidence 9 788999999998887653 3 7889999999999998899999999863
No 9
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=3.8e-42 Score=341.49 Aligned_cols=297 Identities=18% Similarity=0.175 Sum_probs=244.3
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCCc
Q psy17297 3 EIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYGK 82 (456)
Q Consensus 3 EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~~ 82 (456)
+|++|++|||||++++++|+ |+++ -.+.+.+|++.+.++.++
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~---------------------------gv~~i~~ntD~q~L~~~~------ 54 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVE---------------------------GVEFICANTDAQALKNIA------ 54 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------SEEEEEEESBTGGGSSCS------
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCC---------------------------CCCEEEEcCCHHHHhcCC------
Confidence 69999999999999999997 4432 035688888877654433
Q ss_pred ccCCCceeec-----cCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhh
Q psy17297 83 MFRPDNFLHG-----QSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREE 157 (456)
Q Consensus 83 ~~~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~de 157 (456)
.|+.+..+ ..|+||||+. |++..|+.+|+||+.+|.|| +|+|+||+|||||||+|+.|++ +..+
T Consensus 55 --a~~~i~iG~~~t~g~GAG~n~~~-----G~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la~-~a~e 123 (320)
T 1ofu_A 55 --ARTVLQLGPGVTKGLGAGANPEV-----GRQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAE-VAKE 123 (320)
T ss_dssp --CSEEEECCHHHHTTBCCCSCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHH
T ss_pred --CCcEEEccCCccCCCCCCCCHHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHHh
Confidence 23444444 4699999995 47889999999999999998 5899999999999999998765 5566
Q ss_pred CCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCc
Q psy17297 158 YPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITT 237 (456)
Q Consensus 158 yp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~ 237 (456)
|+ +..+++.+.|+ ..|..+++||+.+++++|.+++|.+|++||++|+++|.+.+.+. ++|.++|++|++.++++|.
T Consensus 124 ~g-~lt~~vv~~P~--~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~it~ 199 (320)
T 1ofu_A 124 MG-ILTVAVVTRPF--PFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGISD 199 (320)
T ss_dssp TT-CEEEEEEEECC--GGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHHH
T ss_pred cC-CcEEEEEeCCc--cccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcccHh
Confidence 74 44555555564 56788999999999999999999999999999999999888876 5899999999999999999
Q ss_pred cccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeeccc
Q psy17297 238 CLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIFR 317 (456)
Q Consensus 238 ~~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~R 317 (456)
++|+||.+|.|++++.++|+| |+++++..++++- .....+++++.+.+ .++..++++.++++.+++..|
T Consensus 200 ~ir~pG~iNvD~~dv~t~l~~-~g~~~~g~g~a~g---------~~~~~~a~~~a~~~-~ll~~~d~~~ak~~l~~i~~~ 268 (320)
T 1ofu_A 200 IIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIRN-PLLEDVNLQGARGILVNITAG 268 (320)
T ss_dssp HHHSCSSSSCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHTC-GGGTTCCGGGCSEEEEEEEEC
T ss_pred hcccCCceeecHHHHHHhccC-CCeeEEEEEecCc---------ccHHHHHHHHHHhc-cccccCCccccceEEEEEEeC
Confidence 999999999999999999999 9999887776531 13468888888873 333348999999999999999
Q ss_pred ccCChHHHHHHHhhhccCCCCceeeeccCceeeeeecCCCCCCceeEEEeec
Q psy17297 318 GELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGFKMSGTFIGN 369 (456)
Q Consensus 318 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~~~~~s~~~l~N 369 (456)
|++..+++.+.+..++.+... +..++.+.|..++.+.+..++++..
T Consensus 269 ~d~~~~ev~~a~~~i~~~~~~------~~~ii~G~~~~~~~~~~v~vtviat 314 (320)
T 1ofu_A 269 PDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADMRDELHVTVVAT 314 (320)
T ss_dssp TTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECTTCCSEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhcCC------CCcEEEEEEcCCCCCCeEEEEEEEe
Confidence 999999999999888764322 4678888888888777788888764
No 10
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=8.5e-42 Score=345.65 Aligned_cols=299 Identities=18% Similarity=0.179 Sum_probs=249.1
Q ss_pred EeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCC
Q psy17297 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYG 81 (456)
Q Consensus 2 ~EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~ 81 (456)
.+|++|++|||||+++++||+ |+++ + .+.+.+|++.+.++.++
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~------------------------g---v~fia~NTD~q~L~~~~----- 54 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVE------------------------G---VEFICANTDAQALKNIA----- 54 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCC------------------------S---EEEEEEESCTTTTSSCS-----
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCC------------------------C---CCEEEecCCHHHHhcCC-----
Confidence 479999999999999999997 4432 0 35688888877654432
Q ss_pred cccCCCceeec-----cCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHh
Q psy17297 82 KMFRPDNFLHG-----QSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIRE 156 (456)
Q Consensus 82 ~~~~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~d 156 (456)
.++.+..| ..|+||||+.| ++..++.+|+||+.+|.|| +|+|+||+|||||||+|+.|++.++
T Consensus 55 ---a~~ki~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~~k- 122 (394)
T 2vaw_A 55 ---ARTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEVAK- 122 (394)
T ss_dssp ---SSCEEECCHHHHSSSCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHHHH-
T ss_pred ---CCcEEEccccccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHHHH-
Confidence 23445444 46999999954 7889999999999999998 5999999999999999999999999
Q ss_pred hCCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCC
Q psy17297 157 EYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGIT 236 (456)
Q Consensus 157 eyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t 236 (456)
+|+ +..+++.+.| ...|..+++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|.++|++|++.++++|
T Consensus 123 e~g-~ltvsVv~~P--f~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~~it 198 (394)
T 2vaw_A 123 EMG-ILTVAVVTRP--FPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRGIS 198 (394)
T ss_dssp HHT-CEEEEEEEEC--CGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHHHH
T ss_pred HcC-CcEEEEecCC--cccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHHHHH
Confidence 564 4444444455 456888999999999999999999999999999999999888876 589999999999999999
Q ss_pred ccccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeecc
Q psy17297 237 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIF 316 (456)
Q Consensus 237 ~~~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 316 (456)
.++|+||.+|.|+.++.++|+| |+++++..+.+.- ..+..+++++.|+ .+++..++++.++++.+++..
T Consensus 199 ~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~rv~ea~~~A~~-spLl~~~d~~~ak~~lv~i~~ 267 (394)
T 2vaw_A 199 DIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR-NPLLEDVNLQGARGILVNITA 267 (394)
T ss_dssp HHHHSBCSSCCCHHHHHHHHTT-TCCBEEEEEEECS---------TTHHHHHHHHHHT-CGGGTTCCTTTCSEEEEEEEE
T ss_pred HHhcCCCcccccHHHHHHhccC-CCceeEEEEeccc---------cchHHHHHHHHHh-cCccCCCCccccceeEEEEEe
Confidence 9999999999999999999999 7888776654421 2358899999998 667777999999999999999
Q ss_pred cccCChHHHHHHHhhhccCCCCceeeeccCceeeeeecCCCCCCceeEEEeecC
Q psy17297 317 RGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGFKMSGTFIGNT 370 (456)
Q Consensus 317 RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~~~~~s~~~l~Ns 370 (456)
||++...++.+.+..++.+.. .+.+++.+.|..++.+.+.++++++..
T Consensus 268 ~~dl~~~ev~~a~~~I~~~~~------~~a~i~~G~~~d~~~~~~v~VtvIatG 315 (394)
T 2vaw_A 268 GPDLSLGEYSDVGNIIEQFAS------EHATVKVGTVIDADMRDELHVTVVATG 315 (394)
T ss_dssp CTTCCHHHHHHHHHHHHHHSC------TTSEEEEEEEECSSCCSCEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCCCCeEEEEEEEcc
Confidence 999999999999988876532 156688888988888888888888754
No 11
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=2.7e-42 Score=347.94 Aligned_cols=298 Identities=17% Similarity=0.160 Sum_probs=243.4
Q ss_pred EeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCC
Q psy17297 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYG 81 (456)
Q Consensus 2 ~EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~ 81 (456)
.+|++|++|||||+++++||+ |++. -.+.+++|++.+.++.++
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------gv~fia~NTD~q~L~~~~----- 54 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLK---------------------------GVEFIAINTDAQALLMSD----- 54 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------SEEEEEEESCHHHHHHCC-----
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCC---------------------------CCCEEEecCCHHHHhcCC-----
Confidence 479999999999999999997 4432 035688888877654433
Q ss_pred cccCCCceeec-----cCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHh
Q psy17297 82 KMFRPDNFLHG-----QSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIRE 156 (456)
Q Consensus 82 ~~~~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~d 156 (456)
.|+.+..+ ..|+||||+.| ++..++.+|+||+++|.|| +|+|+||+|||||||+++.|++ |+.
T Consensus 55 ---a~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae-la~ 122 (382)
T 1rq2_A 55 ---ADVKLDVGRDSTRGLGAGADPEVG-----RKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS-IAR 122 (382)
T ss_dssp ---CSEEEECCTTTC-----CCCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHH
T ss_pred ---CCcEEEecccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-HHH
Confidence 23334443 46899999955 7889999999999999997 5999999999999999999998 777
Q ss_pred hCCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCC
Q psy17297 157 EYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGIT 236 (456)
Q Consensus 157 eyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t 236 (456)
+|+ +..+++++.|+ ..|..+++||++++++.|.+++|++|++||++|+++|.+.+.+. ++|.++|++|++.++++|
T Consensus 123 e~g-~ltvsVv~~Pf--~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs~it 198 (382)
T 1rq2_A 123 KLG-ALTVGVVTRPF--SFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQGIT 198 (382)
T ss_dssp HHT-CEEEEEEEECC--GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHHHHH
T ss_pred HcC-CcEEEEEecCc--ccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHHHHH
Confidence 787 44555555664 56889999999999999999999999999999999998888876 689999999999999999
Q ss_pred ccccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeecc
Q psy17297 237 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIF 316 (456)
Q Consensus 237 ~~~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 316 (456)
.++|+||.+|.|+.++.++|+| |+++++..+.+.- .....+++++.++ +++..++++.++++.+.+..
T Consensus 199 ~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~i~g 266 (382)
T 1rq2_A 199 DLITTPGLINVDFADVKGIMSG-AGTALMGIGSARG---------EGRSLKAAEIAIN--SPLLEASMEGAQGVLMSIAG 266 (382)
T ss_dssp HHHHSBCSSCCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCGGGCSEEEEEEEE
T ss_pred HHHccCCceeccHHHHHHhccC-CCeeEEEeeeccc---------ccHHHHHHHHHHh--CcCcCCChhchheEEEEEEe
Confidence 9999999999999999999999 8888877665421 2447888888885 56777999999999887776
Q ss_pred cccCChHHHHHHHhhhccCCCCceeeeccCceeeeeecCCCCCCceeEEEeecC
Q psy17297 317 RGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGFKMSGTFIGNT 370 (456)
Q Consensus 317 RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~~~~~s~~~l~Ns 370 (456)
++++..+++.+.+..++.+.. .+.+++.+.|..++.+.+..+++++..
T Consensus 267 g~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~~~~v~VtvIatG 314 (382)
T 1rq2_A 267 GSDLGLFEINEAASLVQDAAH------PDANIIFGTVIDDSLGDEVRVTVIAAG 314 (382)
T ss_dssp CTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECGGGTTEEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHhhC------CCCCEEEEEEeCCCCCCeEEEEEEEcc
Confidence 668999999999988876532 367788888888877777888888754
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=1.5e-41 Score=342.47 Aligned_cols=298 Identities=16% Similarity=0.169 Sum_probs=245.5
Q ss_pred EeEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCC
Q psy17297 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYG 81 (456)
Q Consensus 2 ~EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~ 81 (456)
.+|..|++|||||++++++|+ |++. -.+.|++|++...++.+..
T Consensus 12 ~~I~vIGvGg~G~navn~m~~-----~gi~---------------------------gv~fia~NTD~q~L~~~~a---- 55 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIE-----NEVQ---------------------------GVEYIAVNTDAQALNLSKA---- 55 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------SCEEEEEESBHHHHHTCCC----
T ss_pred CEEEEEeeCchHHHHHHHHHH-----hCCC---------------------------CCCEEEEeCCHHHHhcCCC----
Confidence 469999999999999999997 4332 1456888888776554432
Q ss_pred cccCCCceee-----ccCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHh
Q psy17297 82 KMFRPDNFLH-----GQSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIRE 156 (456)
Q Consensus 82 ~~~~~~~~~~-----~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~d 156 (456)
++.+.. ...|+||||+. |+++.++.+|+||+.+|.|| +|+|+||+|||||||+|+.|++.+++
T Consensus 56 ----~~ki~iG~~~t~G~GAGnn~a~-----G~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ake 123 (382)
T 2vxy_A 56 ----EVKMQIGAKLTRGLGAGANPEV-----GKKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQIAKD 123 (382)
T ss_dssp ----SEEEECCHHHHTTBCCTTCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHHHHH
T ss_pred ----CcEEEecccccCCCCCCCChHH-----HHHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHHHHH
Confidence 233333 45699999995 57889999999999999998 59999999999999999999998876
Q ss_pred hCCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCC
Q psy17297 157 EYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGIT 236 (456)
Q Consensus 157 eyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t 236 (456)
|+ +..+++++.| ...|..+++||+.++++.|.+++|.+|++||++|+++|.+.+.+. ++|.++|++|++.++++|
T Consensus 124 -~g-~ltvsVvt~P--f~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vsgIt 198 (382)
T 2vxy_A 124 -LG-ALTVGVVTRP--FTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQGIS 198 (382)
T ss_dssp -TT-CEEEEEEEEC--CGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHHHHH
T ss_pred -hC-CCeEEEEeCC--cccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHHHH
Confidence 85 4444444555 466889999999999999999999999999999999999888876 589999999999999999
Q ss_pred ccccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeecc
Q psy17297 237 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIF 316 (456)
Q Consensus 237 ~~~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~ 316 (456)
..+|+||.+|.|+.++.++|+| |+++++..+++.- .....+++++.+++ .+..++++.++++.+.+..
T Consensus 199 ~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~s--~ll~~d~~~ak~~l~~i~g 266 (382)
T 2vxy_A 199 DLIATPGLINLDFADVKTIMSN-KGSALMGIGIATG---------ENRAAEAAKKAISS--PLLEAAIDGAQGVLMNITG 266 (382)
T ss_dssp TTTSSCCTTCCCHHHHHHHTTC-SSEEEEEEEEEES---------TTHHHHHHHHHHTC--TTSCSCGGGCSEEEEEEEE
T ss_pred HHHcCCCccccCHHHHHHhccC-CCceEEEEEeccc---------ccHHHHHHHHHHhC--cCcCCChhhcceeEEEEEe
Confidence 9999999999999999999999 9999887775531 24478888888864 5667999999999887776
Q ss_pred cccCChHHHHHHHhhhccCCCCceeeeccCceeeeeecCCCCCCceeEEEeecC
Q psy17297 317 RGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGFKMSGTFIGNT 370 (456)
Q Consensus 317 RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p~~~~~s~~~l~Ns 370 (456)
++++..+++.+.+..++.+.. .+.+++.+.|..++.+.+..+++++..
T Consensus 267 g~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~~~~~v~VtvIatG 314 (382)
T 2vxy_A 267 GTNLSLYEVQEAADIVASASD------QDVNMIFGSVINENLKDEIVVTVIATG 314 (382)
T ss_dssp CTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECTTCSSEEEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCCCCCeEEEEEEEcC
Confidence 678999999999888876532 356788888888887777778777643
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=2.1e-36 Score=304.01 Aligned_cols=273 Identities=18% Similarity=0.147 Sum_probs=215.4
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCCcc
Q psy17297 4 IVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYGKM 83 (456)
Q Consensus 4 iItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~~~ 83 (456)
|..|.+||+|+.+.+++.+ +++. .+++.||+|+||+++..++.++.++.
T Consensus 45 i~VIGvGg~G~n~v~~m~~-----~~~~-----------------------~g~~~~~~iavNtd~~dl~~L~~~~~--- 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAG-----YKFS-----------------------NGTTCYPTLAVNFAESDMMHLQNIIK--- 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTT-----CBCT-----------------------TSCBSCCEEEEESSGGGGTTCSSSCG---
T ss_pred EEEEEECCcHHHHHHHHHH-----hCcc-----------------------cCCcCceEEEEECCHHHHHHHhcCCC---
Confidence 7789999999999988742 1110 24678999999999999888876653
Q ss_pred cCCCce-eeccCCcccccCccccccc-----hh--hHHHHHHHHHHHHh---hcCCCCceeEEecCCCCccccchHHHHH
Q psy17297 84 FRPDNF-LHGQSGAANNWAKGHYTEG-----VE--LVDAVMDLTRREAE---NCDCMQGFQVTHSLGGGTGSGMGTLLLT 152 (456)
Q Consensus 84 ~~~~~~-~~~~~~~gnnwa~G~~~~g-----~~--~~e~~~d~ir~~~E---~cD~lqGf~i~~sl~GGtGSG~gs~lle 152 (456)
++.+ +.++.|+|+||++|++..| .+ +.|++++.||+.+| .||.+|||+|++|+|||||||+|+.|++
T Consensus 94 --~~~i~l~G~~GAG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~la~ 171 (427)
T 3m89_A 94 --EDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSLVLQ 171 (427)
T ss_dssp --GGEEEC-----------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHHHHH
T ss_pred --cceEEecCCCCCCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHHHHH
Confidence 3444 5678999999999998874 54 49999999999999 8899999999999999999999999999
Q ss_pred HHHhhCCCeeeEEEEEecCCCCCCccchhhHHHHHHHHHh---h------------cCceeEEecchhhHhhhhhccC--
Q psy17297 153 KIREEYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLI---E------------TSDETFCIDNEALYDICVRSLK-- 215 (456)
Q Consensus 153 ~l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~---e------------~sd~~i~~~N~~l~~~~~~~~~-- 215 (456)
.++++|+++++++++++|++. + .++||++++++.|. + ++|.+|++||++|.+++.+...
T Consensus 172 ~lke~~~~~~~~~vvt~P~~~--e--~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~~~~ 247 (427)
T 3m89_A 172 LIREQFFPCPVSMLISLPSGD--P--DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQKGTK 247 (427)
T ss_dssp HHHTTCSSSCEEEEEEECCSC--H--HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSSCSS
T ss_pred HHHHhcCCCcEEEEEEECCCC--c--cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhccccc
Confidence 999999999999999999843 2 35699999999974 4 9999999999998877754432
Q ss_pred CC---CCCcc-cccHHHHHhhccCCccc-c-CCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHH
Q psy17297 216 LN---SPSYR-DLNHLVSATMCGITTCL-R-FPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELT 289 (456)
Q Consensus 216 ~~---~~~~~-~~N~via~~i~~~t~~~-r-~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~ 289 (456)
.. .++|. .+|.+||+.|.+++... | +||.+|.|++++.++|.|.|. |++.++++..... ..+..+.+
T Consensus 248 ~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G--~a~iG~a~~~~~d-----~~~~~~ai 320 (427)
T 3m89_A 248 DLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGR--FLTIGKARIAKFD-----LHSLENSI 320 (427)
T ss_dssp SCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCS--EEEEEEEEECSCS-----HHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCC--eEEEEEecccccc-----hhhHHHHH
Confidence 12 24899 89999999999998754 4 699999999999999999988 5667777764332 12467788
Q ss_pred HhhhccCccccccCCCCCceeeeeecccccC
Q psy17297 290 QELFDAKNMMVACDPRHGKYLTVATIFRGEL 320 (456)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~ls~~~~~RG~~ 320 (456)
++.|++..++..+++..++++++.++..-+.
T Consensus 321 ~~al~~~~Ll~~~d~~~Ak~~lv~i~g~~~~ 351 (427)
T 3m89_A 321 KRSLDEGFFSAEHQFETATMYGGFVLRPSNA 351 (427)
T ss_dssp HHHHHSSTTCSCCCGGGCCEEEEEEEEESSC
T ss_pred HHHHhCCCcccccCcccccEEEEEEEeCchh
Confidence 9999888888899999999998888765443
No 14
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.96 E-value=7.4e-30 Score=252.29 Aligned_cols=193 Identities=16% Similarity=0.254 Sum_probs=155.6
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCCcc
Q psy17297 4 IVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYGKM 83 (456)
Q Consensus 4 iItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~~~ 83 (456)
|..|.+|++|+.+.+++.+.- . --..|+++++...+..+..-
T Consensus 7 I~VIGvGGaG~Nav~~m~~~~-----~----------------------------~v~~iaiNTD~q~L~~~~~~----- 48 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGIC-----G----------------------------DYNALFINTSKKDLDSLKHA----- 48 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHHC-----T----------------------------TSEECEEESCHHHHHTCSSC-----
T ss_pred EEEEEeCCcHHHHHHHHHHcC-----C----------------------------CceEEEEECCHHHHhhCCCC-----
Confidence 778999999999999986421 0 01346777776554333211
Q ss_pred cCCCceeeccCCcccccCccccccchhhHHHHH-HHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhCCCee
Q psy17297 84 FRPDNFLHGQSGAANNWAKGHYTEGVELVDAVM-DLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRM 162 (456)
Q Consensus 84 ~~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~-d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~deyp~~~ 162 (456)
+.+-++....|+|+||+.| ++..++.. |+||+.+|+|+.+|||+++||+|||||||+|+.|++.|+++||+++
T Consensus 49 -~~ki~ig~GlGAG~np~vG-----~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~ 122 (360)
T 3v3t_A 49 -KHTYHIPYAEGCGKERKKA-----VGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKH 122 (360)
T ss_dssp -SCEEECC------CCHHHH-----HHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSE
T ss_pred -ccEEEcCCCCCCCCCHHHH-----HHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCe
Confidence 1111233457899998875 57778888 8999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCCCCCccchhhHHHHHHHHHhh---cCcee--EEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCc
Q psy17297 163 INAFSVVPSPKVSDTVVEPYNAILSLSHLIE---TSDET--FCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITT 237 (456)
Q Consensus 163 i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e---~sd~~--i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~ 237 (456)
+.+++|+|++. +.++++||+++++++|.+ ++|.+ |++||++ .++|.++|++||++++++|.
T Consensus 123 v~~vtV~Pf~~--Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~lt~ 188 (360)
T 3v3t_A 123 FGFVGVLPKAT--EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFNDFMN 188 (360)
T ss_dssp EEEEEEECCTT--SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHHHHG
T ss_pred EEEEEEeCCCc--cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHHHHH
Confidence 99999999854 568999999999999999 55555 9999998 47899999999999999999
Q ss_pred cccCCCCcchhHHhhhh
Q psy17297 238 CLRFPGQLNADLRKLAV 254 (456)
Q Consensus 238 ~~r~~~~~n~~l~~l~~ 254 (456)
..|+||.+|.|+.++.+
T Consensus 189 ~l~~~G~iNVDfaDv~t 205 (360)
T 3v3t_A 189 MSESHAEGVVDEDEISK 205 (360)
T ss_dssp GGSCCSSCCCCHHHHHH
T ss_pred hhccCCceeeeHHHHHH
Confidence 99999999999999954
No 15
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.96 E-value=8.3e-30 Score=254.42 Aligned_cols=266 Identities=17% Similarity=0.232 Sum_probs=199.7
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCCcc
Q psy17297 4 IVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYGKM 83 (456)
Q Consensus 4 iItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~~~ 83 (456)
|..|.||++|+.+-+++.+. ++. . ...|.++++...+..+.
T Consensus 20 IkVIGVGG~G~NaVn~m~~~-----~~~----------------g-----------vefiaiNTD~qaL~~s~------- 60 (396)
T 4dxd_A 20 LKVIGVGGGGNNAVNRMIDH-----GMN----------------N-----------VEFIAINTDGQALNLSK------- 60 (396)
T ss_dssp EEEEEEHHHHHHHHHHHHHH-----CCC----------------S-----------EEEEEEESCHHHHHTCC-------
T ss_pred EEEEEECCcHHHHHHHHHHh-----CCC----------------C-----------ceEEEEECCHHHHhcCC-------
Confidence 77899999999988777542 111 0 12378887765443321
Q ss_pred cCCCceeec-----cCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhC
Q psy17297 84 FRPDNFLHG-----QSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEY 158 (456)
Q Consensus 84 ~~~~~~~~~-----~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~dey 158 (456)
-+..+..| ..|+||||+. |++..++..|+||+.+|.|| +|+|+||+|||||||+++.|++ +..+|
T Consensus 61 -a~~ki~lG~~~t~GlGAG~np~v-----G~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIae-iake~ 130 (396)
T 4dxd_A 61 -AESKIQIGEKLTRGLGAGANPEI-----GKKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVAK-IAKEM 130 (396)
T ss_dssp -CSEEEECCHHHHTTSCCTTCHHH-----HHHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HHHHT
T ss_pred -CccEEEcCccccCCCCCCCChHH-----HHHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHHH-HHHhc
Confidence 12233333 3689999885 47889999999999999998 5999999999999999998776 55678
Q ss_pred CCeeeEEEEEecCCCCCCccchhhHHHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCcc
Q psy17297 159 PDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTC 238 (456)
Q Consensus 159 p~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~~ 238 (456)
+ +++++|+|.|...|..+++||++++++.|.+++|++|++||++|+++|.+.+.+.. +|..+|++|++.++++|.+
T Consensus 131 g---~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~-af~~aN~ll~q~VsgIT~~ 206 (396)
T 4dxd_A 131 G---ALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQGISDL 206 (396)
T ss_dssp T---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred C---CceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHHH-HHHHHHHHHHHHHHhhhhh
Confidence 6 45666666555678889999999999999999999999999999999988887765 9999999999999999999
Q ss_pred ccCCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccccccCCCCCceeeeeecccc
Q psy17297 239 LRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIFRG 318 (456)
Q Consensus 239 ~r~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~ls~~~~~RG 318 (456)
+||||.+|.|+.++.++|.+. ...++....++-. -...+.+.+.+... +...+....+.+-..+....
T Consensus 207 irfpG~iNvDfaDv~t~m~~~-G~A~mG~G~a~G~---------~ra~~A~~~Ai~sP--LL~~~i~gAkgvLvnItgg~ 274 (396)
T 4dxd_A 207 IAVSGEVNLDFADVKTIMSNQ-GSALMGIGVSSGE---------NRAVEAAKKAISSP--LLETSIVGAQGVLMNITGGE 274 (396)
T ss_dssp HHSCCTBCCCHHHHHHHHTTC-EECEEEEEEEEST---------THHHHHHHHHHCCS--SCSSCSTTCCEEEEEEEECT
T ss_pred hccCCcccCCHHHHHHHhhcC-CeEEEEEEeccCC---------chHHHHHHHHHhCc--cccCChhhhcceEEEEEcCC
Confidence 999999999999999999987 5555555555421 11344444444322 22445555555555555556
Q ss_pred cCChHHHHHHHhhhcc
Q psy17297 319 ELSVKEIDDHIVNIHN 334 (456)
Q Consensus 319 ~~~~~~~~~~~~~~~~ 334 (456)
++...++.+....++.
T Consensus 275 dl~l~Ev~~~~~~i~~ 290 (396)
T 4dxd_A 275 SLSLFEAQEAADIVQD 290 (396)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 7888888877666553
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.70 E-value=3.8e-17 Score=165.85 Aligned_cols=339 Identities=14% Similarity=0.128 Sum_probs=196.3
Q ss_pred EEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCCcc
Q psy17297 4 IVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYGKM 83 (456)
Q Consensus 4 iItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~~~ 83 (456)
|..|.+||||+.|-+.|.+ +.... ....+..++|+|+++...+..+... ..
T Consensus 18 i~vIGvGgaG~~ivd~~~~-----~~~~~---------------------~~~~~~~~~iaiNTd~~~L~~~~~~---~~ 68 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECAN-----KETQI---------------------KNNKYPYRAILVNTNSQDFNKIEIK---NT 68 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHT-----CCCCC---------------------TTCSCCCEEEEEECCCHHHHHSCCC---SC
T ss_pred EEEEEECCchHHHHHHHHh-----ccccc---------------------ccccccccEEEEECCHHHHhhccCc---ch
Confidence 7789999999999988753 11100 0123346789999998765444221 11
Q ss_pred cCCCceeecc--CCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhCCCe
Q psy17297 84 FRPDNFLHGQ--SGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDR 161 (456)
Q Consensus 84 ~~~~~~~~~~--~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~deyp~~ 161 (456)
......++.. .|+|+||..|+ ....+..+++.+.|+..++.+|. ++|++++|||||+|.++.+++.+++. ..
T Consensus 69 ~~~g~~~~~g~g~GaG~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d~---vfi~ag~GGGTGtGa~pvia~~~ke~--~~ 142 (389)
T 4ei7_A 69 GNVRKIQLEGYEQGAARNPQVGE-EAFVKHETKIFEAVKQEFEDRDF---IWITCGLGGGTGTGALLKAIEMLYEH--DY 142 (389)
T ss_dssp SSEEEEECTTCCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHTTTCSE---EEEEEETTSSHHHHHHHHHHHHHHHT--TC
T ss_pred hhhhhhccCCCCCCCCCChHHHH-HHHHHHHHHHHHHHHhhcCCccE---EEEEecCCCCCccccHHHHHHHHHHc--CC
Confidence 1222223332 48999988875 34566667777777777777764 59999999999999999999999985 45
Q ss_pred eeEEEEEecCCCCCCccch---hhHHHHHHHHHhhcCceeEEecchhhHhhhhhccC-C-CCCCcccccHHHHHhhccCC
Q psy17297 162 MINAFSVVPSPKVSDTVVE---PYNAILSLSHLIETSDETFCIDNEALYDICVRSLK-L-NSPSYRDLNHLVSATMCGIT 236 (456)
Q Consensus 162 ~i~~~~v~P~~~~~~~~~~---~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~-~-~~~~~~~~N~via~~i~~~t 236 (456)
++..++++|+. .|.... +++.+..|..+.+++|.+|++||+.|.++....-+ . -...|..+|.+|++.+..++
T Consensus 143 ~~~~vvt~Pf~--~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~~~af~~an~~l~~~v~~i~ 220 (389)
T 4ei7_A 143 NFGLLLTLPRD--AEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALANEYTSYSNKYIADALHEIN 220 (389)
T ss_dssp CEEEEEEECCG--GGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCGGGHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCC--cCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 67778889983 333334 44445555555688999999999999988754321 1 12368889999999876654
Q ss_pred cccc---CCCCcchhHHhhhhcccccCCcccccccCccCcCCcccccccCCHHHHHHhhhccCccc--cccCCCCCceee
Q psy17297 237 TCLR---FPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMM--VACDPRHGKYLT 311 (456)
Q Consensus 237 ~~~r---~~~~~n~~l~~l~~~L~P~p~~~fl~~s~~P~~~~~~~~~~~~t~~~l~~~~~~~~~~~--~~~~~~~~~~ls 311 (456)
.... .+|.+|.|+.++.+-|.... +....+.................+.+.+.+.+.... ..++....+...
T Consensus 221 ~~~~~~~~~g~in~D~aDv~~vm~~~G---~a~~G~~~~~~~~~~~~~~~~~~~a~~~ai~~~ll~~~~~~~i~~A~~~l 297 (389)
T 4ei7_A 221 LVTSSFTPFSDTHFDASEFAQVINTPG---VLSLAKLELKSNQLDTENPLGYLTQLGNALEKGVLYDTEREELESAKKSA 297 (389)
T ss_dssp HHTTSSEESSSCCCCHHHHHHHHTSSE---EEEEEEEEEEGGGCCTTSTHHHHHHHHHHHHBCSSSBCCHHHHTTCSEEE
T ss_pred HHHhCCCCCCeEEeeHHHHHHHhcCCC---EEEEEeeeccccccccccchHHHHHHHHHHhccccccccccChhhhheEE
Confidence 3332 24889999999877654322 223333322111100000111222222222221110 112222222222
Q ss_pred eeecccccC------C---hHHHHHHHhhhccCCCCceeeeccCceeeeeecCCC---CCCceeEEEeecCcccHHHHHH
Q psy17297 312 VATIFRGEL------S---VKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAP---KGFKMSGTFIGNTTAIQGLFQR 379 (456)
Q Consensus 312 ~~~~~RG~~------~---~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~p---~~~~~s~~~l~Nst~i~~~l~~ 379 (456)
.. +..|.. . ..++.+.+.. +..|.+......+....+ ......++++.++..+...+.+
T Consensus 298 l~-I~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~~~~~~~~~i~~g~~~~~~~~~~V~v~viatG~~~~~~~~~ 368 (389)
T 4ei7_A 298 LS-IVTSPLRAGRLYNFSFLNQMENFLKE--------RTPYVDERPIAPYVNKHTTKKEEDIVKFYSVVAGLPLPKRVSD 368 (389)
T ss_dssp EE-EEECHHHHHHHSSHHHHHHHHHHHHH--------HSTTCSCCCEEEEECTTCCGGGTTEEEEEEEEEEECCCHHHHH
T ss_pred EE-EEcCcccchhhhhHHHHHHHHHHHHh--------hccccCcccceEEecCCCCcCCCCeEEEEEEEecCCchHhHHH
Confidence 12 222211 1 0112222221 234544333222222222 2345678899999999888999
Q ss_pred HHHHHhhccccc
Q psy17297 380 IMDQFCSMFRRK 391 (456)
Q Consensus 380 l~~~~~~m~~kr 391 (456)
+.+++.++..++
T Consensus 369 ~~~~~~~~~e~~ 380 (389)
T 4ei7_A 369 IIDEITRIKEER 380 (389)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888876655
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.00 E-value=2.6e-10 Score=108.83 Aligned_cols=171 Identities=18% Similarity=0.224 Sum_probs=115.2
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHHcCCCCCCCCCCCcchhccccccccccCCCcccceeEEeCCCCCeeccccccCCCc
Q psy17297 3 EIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYGK 82 (456)
Q Consensus 3 EiItiq~Gq~gnqiG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~pR~l~vD~e~~~i~~i~~~~~~~ 82 (456)
.|..+.+|++||.|.+.+++. + +.+++||++.+-+...+ ...
T Consensus 4 ki~VvGvGGAG~Nii~rL~~~--------------------------------G---a~~iAiNTD~q~L~~~k--~~~- 45 (315)
T 3r4v_A 4 KVCLIFAGGTGMNVATKLVDL--------------------------------G---EAVHCFDTCDKNVVDVH--RSV- 45 (315)
T ss_dssp SCEEEEEHHHHHHHHGGGGGG--------------------------------G---GGEEEEESSSTTCCGGG--GGS-
T ss_pred eEEEEEEcCcchHHHHHHHHc--------------------------------C---CCEEEEECchHHhhhhh--hhc-
Confidence 466788999999998766531 1 34577777766442211 000
Q ss_pred ccCCCceeeccCCcccccCccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhCCCee
Q psy17297 83 MFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRM 162 (456)
Q Consensus 83 ~~~~~~~~~~~~~~gnnwa~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~deyp~~~ 162 (456)
...+..+..|+|.+ ...|.+..++..+.|++.++.+|-+ +++.++|||||+|.++.+++.+++. ...
T Consensus 46 ---~~~i~~gglGAGgd-----pe~g~e~a~e~~~eI~~~l~~aD~V---FVtaGLGGGTGTGaAPVvAeiake~--Gal 112 (315)
T 3r4v_A 46 ---NVTLTKGTRGAGGN-----RKVILPLVRPQIPALMDTIPEADFY---IVCYSLGGGSGSVLGPLITGQLADR--KAS 112 (315)
T ss_dssp ---EEEECTTCCC---C-----HHHHHHHHGGGHHHHHHTSCCBSCE---EEEEESSSSSHHHHHHHHHHHHHHT--TCC
T ss_pred ---ceeeecccCCCCCC-----hHHHHHHHHhhHHHHHHhcCCCCEE---EEEeccCCccccchHHHHHHHHHHc--CCC
Confidence 01112233456555 4566777777677788888877665 9999999999999999999999998 335
Q ss_pred eEEEEEecCCCCCCccchhhH---HHHHHHHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCc
Q psy17297 163 INAFSVVPSPKVSDTVVEPYN---AILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITT 237 (456)
Q Consensus 163 i~~~~v~P~~~~~~~~~~~yN---~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~ 237 (456)
+.++++.|.+ ..+..-| ++-+|..|.+.+|..|+|+ +.+ ..+...+..+|+-+|..|..+..
T Consensus 113 vVavVt~~~E----~~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Le------n~~~lp~~~lN~eia~rL~al~~ 177 (315)
T 3r4v_A 113 FVSFVVGAME----STDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVP------NTQGRSYESINDEIAEKIRKVVL 177 (315)
T ss_dssp EEEEEEECCS----SHHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEE------CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCC----cchhhhchHHHHHHHHHHHhccCCcEEEe---ccc------cCCCCchHHHHHHHHHHHHHHHH
Confidence 7777777742 2233335 6778999999999999997 211 23445679999999998876543
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=96.79 E-value=0.00084 Score=43.85 Aligned_cols=26 Identities=31% Similarity=0.395 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcc
Q psy17297 405 FEFHEAGANVEDLICEYQQYQEASIE 430 (456)
Q Consensus 405 ~eF~Ea~~~l~~l~~~Y~~~~~~~~~ 430 (456)
++|+||+++|.+|+++|+++..+..+
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e 26 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVE 26 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhccccc
Confidence 58999999999999999999877654
No 19
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=65.96 E-value=5 Score=33.98 Aligned_cols=31 Identities=16% Similarity=0.038 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHHhhcCCCCceeEEecCCCCc
Q psy17297 111 LVDAVMDLTRREAENCDCMQGFQVTHSLGGGT 142 (456)
Q Consensus 111 ~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGt 142 (456)
-.+++.++|+..+++.|. +|+.++.++-|||
T Consensus 44 ~~~~~~~~i~~~i~~~~~-~gvliLtDl~GGS 74 (142)
T 3bed_A 44 GLSGTQAKLAAILKEAGN-VPTLVLADLXGGT 74 (142)
T ss_dssp HHHHHHHHHHHHHHHHCS-CCEEEEESSTTSH
T ss_pred CHHHHHHHHHHHHHhcCC-CCEEEEEECCCCH
Confidence 345788889999999999 9999999998886
No 20
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=56.01 E-value=26 Score=29.10 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhhcCCCCceeEEecCCCCc
Q psy17297 112 VDAVMDLTRREAENCDCMQGFQVTHSLGGGT 142 (456)
Q Consensus 112 ~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGt 142 (456)
.+++.++++..+++.|.=+|+.++.++-|||
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGS 71 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGS 71 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCC
Confidence 4567888999999999889999999998886
No 21
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=54.89 E-value=10 Score=32.25 Aligned_cols=39 Identities=10% Similarity=0.108 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhhc-CCCCceeEEecCCCCccccchHHH
Q psy17297 112 VDAVMDLTRREAENC-DCMQGFQVTHSLGGGTGSGMGTLL 150 (456)
Q Consensus 112 ~e~~~d~ir~~~E~c-D~lqGf~i~~sl~GGtGSG~gs~l 150 (456)
.+++.++++..+++. |.=+|+.++.++.|||=+-.+..+
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l 82 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSM 82 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHH
Confidence 467778888888888 888999999999998743334333
No 22
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=51.88 E-value=57 Score=28.61 Aligned_cols=113 Identities=12% Similarity=0.117 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHHhh-cCCCCce-eEEecCCCCccccchHHHHHHHHhhCCCeeeEEEEEecCCCCCCccchhhHHHHHH
Q psy17297 111 LVDAVMDLTRREAEN-CDCMQGF-QVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVEPYNAILSL 188 (456)
Q Consensus 111 ~~e~~~d~ir~~~E~-cD~lqGf-~i~~sl~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~~~~~~~~~yN~~lsl 188 (456)
-...+...|++.+++ .+ +|+ -++.+.+.|+- -+++.++-.|+.+||...+ .+++|+...++.- .+-| -...
T Consensus 24 ~~~~ik~~L~~~l~~l~~--~G~~~~isgga~G~D-~~aae~vl~lk~~y~~i~L--~~v~Pf~~~~~~w-~~~~-~~~y 96 (181)
T 2nx2_A 24 ALYYIKKAIKNRLIAFLD--EGLEWILISGQLGVE-LWAAEAAYDLQEEYPDLKV--AVITPFYEQEKNW-KEPN-KEQY 96 (181)
T ss_dssp HHHHHHHHHHHHHHHHHT--TTCCEEEECCCTTHH-HHHHHHHHTTTTTCTTCEE--EEEESSBCTTTTS-CHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHh--CCCcEEEECCCccHH-HHHHHHHHHhccccCCceE--EEEecccchhhCC-CHHH-HHHH
Confidence 334455555555554 22 253 45555555553 3455556666778985433 3477875444432 2223 3467
Q ss_pred HHHhhcCceeEEecchhhHhhhhhccCCCCCCcccccHHHHHhhccCCccc
Q psy17297 189 SHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCL 239 (456)
Q Consensus 189 ~~l~e~sd~~i~~~N~~l~~~~~~~~~~~~~~~~~~N~via~~i~~~t~~~ 239 (456)
..+.+.||-+..+...... ....|..-|+.+...-+.+.+-+
T Consensus 97 ~~ll~~aD~v~~l~~~~y~---------~~~~~~~rn~~mvd~sD~liavy 138 (181)
T 2nx2_A 97 EAVLAQADYEASLTHRPYE---------SPLQFKQKNQFFIDKSDGLLLLY 138 (181)
T ss_dssp HHHHHHCSEEEESSSSBCC---------CHHHHHHHHHHHHHHSSEEEEEC
T ss_pred HHHHHhCCeEEecccCCCC---------CHHHHHHHHHHHHHHCCEEEEEE
Confidence 7788888888876432210 01134555666666655554433
No 23
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=50.50 E-value=12 Score=35.01 Aligned_cols=70 Identities=14% Similarity=0.238 Sum_probs=46.0
Q ss_pred ccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhCCCeeeEEEEEecCCCCCC
Q psy17297 102 KGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSD 176 (456)
Q Consensus 102 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~~~~ 176 (456)
+|++..-..+.+.+.+.|++.+++.-...=+..=||+|| +++..++-.|+..+|...+.++ .+-.+..++
T Consensus 97 ~GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~v~~~-tFg~PrvGn 166 (258)
T 3g7n_A 97 RGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGG----ALTSIAHVALAQNFPDKSLVSN-ALNAFPIGN 166 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHH----HHHHHHHHHHHHHCTTSCEEEE-EESCCCCBC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHH----HHHHHHHHHHHHhCCCCceeEE-EecCCCCCC
Confidence 465555566777888888888887755444455679976 4667777778888887655433 344444443
No 24
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=49.83 E-value=25 Score=29.21 Aligned_cols=39 Identities=15% Similarity=0.325 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHH
Q psy17297 111 LVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLL 151 (456)
Q Consensus 111 ~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~ll 151 (456)
-.+++.++++..+++.|.-+|+.++.++ ||=+-++..+.
T Consensus 43 ~~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~ 81 (130)
T 3gx1_A 43 EVKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILT 81 (130)
T ss_dssp CHHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHH
Confidence 4678889999999999999999999999 54444444443
No 25
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=48.42 E-value=16 Score=31.20 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhcCCCCceeEEecCCCCcc
Q psy17297 112 VDAVMDLTRREAENCDCMQGFQVTHSLGGGTG 143 (456)
Q Consensus 112 ~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtG 143 (456)
.+.+.++++..+++.|.-+|+.++.++-|||=
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp 72 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASP 72 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCH
Confidence 56677888999999999899999999999874
No 26
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=45.85 E-value=10 Score=32.86 Aligned_cols=31 Identities=6% Similarity=-0.010 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhhcCCCCceeEEecCCCCcc
Q psy17297 113 DAVMDLTRREAENCDCMQGFQVTHSLGGGTG 143 (456)
Q Consensus 113 e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtG 143 (456)
+++.++++..+++.|.-+|+.++.++-|||=
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP 91 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSV 91 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCH
Confidence 4577889999999999999999999999873
No 27
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=38.12 E-value=26 Score=33.02 Aligned_cols=70 Identities=17% Similarity=0.304 Sum_probs=43.9
Q ss_pred ccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhCCCeeeEEEEEecCCCCCC
Q psy17297 102 KGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSD 176 (456)
Q Consensus 102 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~~~~~~ 176 (456)
+|++..-..+.+.+.+.|++.+++.....=+..=||+||+ ++..++-.|+..+|...+.++ .+-.+..++
T Consensus 111 ~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGa----lA~l~a~~l~~~~~~~~~~~~-tfg~PrvGn 180 (279)
T 3uue_A 111 HGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAA----MGLLCAMDIELRMDGGLYKTY-LFGLPRLGN 180 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHH----HHHHHHHHHHHHSTTCCSEEE-EESCCCCBC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHH----HHHHHHHHHHHhCCCCceEEE-EecCCCcCC
Confidence 4555555667777888888888876554444556789664 667777777777775443333 333334444
No 28
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=35.97 E-value=44 Score=28.01 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHHhh--cCCCCceeEEecCCCCccccchHHHH
Q psy17297 111 LVDAVMDLTRREAEN--CDCMQGFQVTHSLGGGTGSGMGTLLL 151 (456)
Q Consensus 111 ~~e~~~d~ir~~~E~--cD~lqGf~i~~sl~GGtGSG~gs~ll 151 (456)
-.+++.++++..+++ .|.-+|+.++.++ ||=+-++..+.
T Consensus 43 ~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~ 83 (139)
T 3gdw_A 43 EVQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLF 83 (139)
T ss_dssp CHHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHH
Confidence 356888999999999 7789999999999 44344444443
No 29
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=32.28 E-value=21 Score=29.75 Aligned_cols=28 Identities=14% Similarity=0.108 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhhcCCCCceeEEecCCCCc
Q psy17297 114 AVMDLTRREAENCDCMQGFQVTHSLGGGT 142 (456)
Q Consensus 114 ~~~d~ir~~~E~cD~lqGf~i~~sl~GGt 142 (456)
...++|+..+++.|.=+|+.++.++ ||+
T Consensus 49 ~~~~~i~~ai~~~~~~dgVlvltDL-Ggs 76 (135)
T 3b48_A 49 SDPMKIIDTINEADSDREFLIFADL-GSA 76 (135)
T ss_dssp CCHHHHHHHHHHSCSSCEEEEEECS-HHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEeC-CCC
Confidence 3446688888888888999999999 664
No 30
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=31.97 E-value=31 Score=32.91 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=38.9
Q ss_pred ccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhCCCeeeEEE
Q psy17297 102 KGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAF 166 (456)
Q Consensus 102 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~deyp~~~i~~~ 166 (456)
+|++..-..+.+.+.+.|++.+++.....=+..=||+||+ ++..++-.|+...++..+++|
T Consensus 127 ~GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~~~~~~~~tf 187 (301)
T 3o0d_A 127 NGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGA----AALLFGINLKVNGHDPLVVTL 187 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeccChHHH----HHHHHHHHHHhcCCCceEEee
Confidence 4555555666777888888888876544334455788664 666666677776655444444
No 31
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=30.39 E-value=34 Score=28.45 Aligned_cols=27 Identities=15% Similarity=0.235 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhhcCCCCceeEEecCCCCc
Q psy17297 114 AVMDLTRREAENCDCMQGFQVTHSLGGGT 142 (456)
Q Consensus 114 ~~~d~ir~~~E~cD~lqGf~i~~sl~GGt 142 (456)
...++|+..+++.|. +|+.++.++ ||+
T Consensus 44 ~~~~~i~~ai~~~~~-dgVlvltDL-Ggs 70 (131)
T 3ct6_A 44 TSFDRVMNAIEENEA-DNLLTFFDL-GSA 70 (131)
T ss_dssp CCHHHHHHHHHHSSC-SEEEEEESS-GGG
T ss_pred HHHHHHHHHHHhCCC-CCEEEEEeC-CCC
Confidence 345667888888884 899999999 654
No 32
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=29.79 E-value=22 Score=33.81 Aligned_cols=34 Identities=18% Similarity=0.405 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHH
Q psy17297 112 VDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTK 153 (456)
Q Consensus 112 ~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~ 153 (456)
.+++++++|+.+++=..+ +++|.|+|++++..|.
T Consensus 13 r~~il~~l~~~i~~~~~i--------ig~gaGtGlsAk~~e~ 46 (286)
T 2p10_A 13 RSELVDRFQKKIRAGEPI--------IGGGAGTGLSAKSEEA 46 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE--------EEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCce--------EEEecccchhhHHHHh
Confidence 568899999999977666 5678889999888765
No 33
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=29.77 E-value=42 Score=31.47 Aligned_cols=53 Identities=21% Similarity=0.256 Sum_probs=35.9
Q ss_pred CccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhh
Q psy17297 101 AKGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREE 157 (456)
Q Consensus 101 a~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~de 157 (456)
.+|++..-..+.+++.+.|++.+++.....=+..=|||||+ ++..++-.+++.
T Consensus 109 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~ 161 (279)
T 1tia_A 109 ELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAA----VATLAATDLRGK 161 (279)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHH----HHHHHHHHHHhc
Confidence 46766555667778888888888876555556667799775 555555666554
No 34
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=29.43 E-value=36 Score=31.60 Aligned_cols=51 Identities=24% Similarity=0.303 Sum_probs=33.9
Q ss_pred ccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHh
Q psy17297 102 KGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIRE 156 (456)
Q Consensus 102 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~d 156 (456)
+|++..-..+.+.+.+.|++.+++.....=+..=||+||+ ++..++-.|+.
T Consensus 98 ~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~ 148 (261)
T 1uwc_A 98 GGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGAS----MAALTAAQLSA 148 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHH----HHHHHHHHHhc
Confidence 4555444566777888888888877555445666799774 55666666664
No 35
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=25.30 E-value=43 Score=32.28 Aligned_cols=61 Identities=21% Similarity=0.220 Sum_probs=37.9
Q ss_pred ccccccchhhHHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhCCCeeeEEE
Q psy17297 102 KGHYTEGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAF 166 (456)
Q Consensus 102 ~G~~~~g~~~~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~deyp~~~i~~~ 166 (456)
+|++..-..+.+.+.+.|++.+++.....=+..=||+||+ ++..++-.|+...+....++|
T Consensus 109 ~GF~~a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGA----lA~L~a~~l~~~~~~v~~~TF 169 (319)
T 3ngm_A 109 SGFQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGGA----VATLAGANLRIGGTPLDIYTY 169 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHH----HHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHH----HHHHHHHHHHhcCCCceeeec
Confidence 5665555667777888888888776554445556799774 556656666655444334433
No 36
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=24.72 E-value=24 Score=24.78 Aligned_cols=23 Identities=30% Similarity=0.408 Sum_probs=18.0
Q ss_pred ccccccchhhhccCCCChhhHHHHHH
Q psy17297 387 MFRRKAFLHWYTVEGMDEFEFHEAGA 412 (456)
Q Consensus 387 m~~krAflH~Y~~~Gmee~eF~Ea~~ 412 (456)
+-+|.+|| .+-|+.++|+.+|+.
T Consensus 30 ~~~K~~FL---~sKGLt~~EI~~Al~ 52 (54)
T 3ff5_A 30 LATRRAFL---KKKGLTDEEIDLAFQ 52 (54)
T ss_dssp HHHHHHHH---HHTTCCHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCCHHHHHHHHH
Confidence 34567777 456999999999986
No 37
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=22.22 E-value=1.5e+02 Score=27.14 Aligned_cols=59 Identities=24% Similarity=0.290 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhhcCCCCceeEEecCCCCccccchHHHHHHHHhhCCCeeeEEEEEecC
Q psy17297 112 VDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPS 171 (456)
Q Consensus 112 ~e~~~d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs~lle~l~deyp~~~i~~~~v~P~ 171 (456)
.+-+.+.+...++.......=.-+-++|.||| .++..++..+...+|...+...++=|+
T Consensus 33 ~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG-~~~~~~l~~l~~~~~~~~v~~~~vD~S 91 (292)
T 2aot_A 33 QEFMDKKLPGIIGRIGDTKSEIKILSIGGGAG-EIDLQILSKVQAQYPGVCINNEVVEPS 91 (292)
T ss_dssp HHHHHHTHHHHSSSTTTTCSEEEEEEETCTTS-HHHHHHHHHHHHHSTTCEEEEEEECSC
T ss_pred HHHHHHhchhHHhhccCCCCCCeEEEEcCCCC-HHHHHHHHHHHhhCCCceeeEEEEeCC
Confidence 33344445555555432222235678888887 566668888888887764433556554
No 38
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=22.21 E-value=1.1e+02 Score=28.68 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=36.6
Q ss_pred HHHHHHHhhcCCCCceeEEecCCCCccccch-----HHHHHHHHhhCCCeee-EEEEEecCCCCCCccchhhHHHHHHHH
Q psy17297 117 DLTRREAENCDCMQGFQVTHSLGGGTGSGMG-----TLLLTKIREEYPDRMI-NAFSVVPSPKVSDTVVEPYNAILSLSH 190 (456)
Q Consensus 117 d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~g-----s~lle~l~deyp~~~i-~~~~v~P~~~~~~~~~~~yN~~lsl~~ 190 (456)
++|+..++.+ .||..+.|+.|-||..-+ ..+++.+|+.- +.++ ..+.|- .+= ....
T Consensus 158 eri~~ia~~~---~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~vGfGI~----------t~e----~a~~ 219 (271)
T 1ujp_A 158 ARIATVVRHA---TGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART-ALPVAVGFGVS----------GKA----TAAQ 219 (271)
T ss_dssp HHHHHHHTTC---CSCEEEECC------------CCHHHHHHHHTTC-CSCEEEESCCC----------SHH----HHHH
T ss_pred HHHHHHHHhC---CCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CCCEEEEcCCC----------CHH----HHHH
Confidence 4666666665 588877799999987543 35778888753 4443 223231 111 2334
Q ss_pred HhhcCceeEEecchhhHhh
Q psy17297 191 LIETSDETFCIDNEALYDI 209 (456)
Q Consensus 191 l~e~sd~~i~~~N~~l~~~ 209 (456)
+ ..+|++|+= .++.+.
T Consensus 220 ~-~~ADgVIVG--SAi~~~ 235 (271)
T 1ujp_A 220 A-AVADGVVVG--SALVRA 235 (271)
T ss_dssp H-TTSSEEEEC--HHHHHH
T ss_pred h-cCCCEEEEC--hHHhcc
Confidence 5 789999984 355443
No 39
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=21.98 E-value=28 Score=25.72 Aligned_cols=25 Identities=28% Similarity=0.383 Sum_probs=19.6
Q ss_pred ccccccchhhhccCCCChhhHHHHHHHH
Q psy17297 387 MFRRKAFLHWYTVEGMDEFEFHEAGANV 414 (456)
Q Consensus 387 m~~krAflH~Y~~~Gmee~eF~Ea~~~l 414 (456)
+-+|++|| ++-|+.++|+.+|+...
T Consensus 35 ~~~K~~FL---~sKGLt~eEI~~Al~ra 59 (70)
T 2w84_A 35 LATRRAFL---KKKGLTDEEIDMAFQQS 59 (70)
T ss_dssp HHHHHHHH---HHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCCHHHHHHHHHHc
Confidence 34577777 56799999999998753
No 40
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=21.03 E-value=47 Score=26.04 Aligned_cols=53 Identities=23% Similarity=0.393 Sum_probs=38.2
Q ss_pred eecCcccHHHHHH-------HHHHHhhccccccchhhhccCCCC--hhhHHHHHHHHHHHHHHHHHH
Q psy17297 367 IGNTTAIQGLFQR-------IMDQFCSMFRRKAFLHWYTVEGMD--EFEFHEAGANVEDLICEYQQY 424 (456)
Q Consensus 367 l~Nst~i~~~l~~-------l~~~~~~m~~krAflH~Y~~~Gme--e~eF~Ea~~~l~~l~~~Y~~~ 424 (456)
++|.++|...|.. +++.-..+-.+|.|. +|+. -....||+..|..|.+++++-
T Consensus 30 i~nDssVQsLF~~lt~MH~~Ll~~i~~~ee~R~~y-----E~LQDkL~qi~eAR~ALdaLR~eH~~K 91 (98)
T 3f1i_H 30 ITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYY-----EGLQDKLAQIRDARGALSALREEHREK 91 (98)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888888764 455666666777443 4554 345899999999999999754
No 41
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=20.26 E-value=1.3e+02 Score=27.64 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=38.5
Q ss_pred HHHHHHHhhcCCCCceeEEecCCCCccccchH------HHHHHHHhhCCCeeeE-EEEEecCCCCCCccchhhHHHHHHH
Q psy17297 117 DLTRREAENCDCMQGFQVTHSLGGGTGSGMGT------LLLTKIREEYPDRMIN-AFSVVPSPKVSDTVVEPYNAILSLS 189 (456)
Q Consensus 117 d~ir~~~E~cD~lqGf~i~~sl~GGtGSG~gs------~lle~l~deyp~~~i~-~~~v~P~~~~~~~~~~~yN~~lsl~ 189 (456)
++|+..++.+ .||....|+.|.||..-+. .+++.+|+.. +.++. .+.+ ..-+ ...
T Consensus 161 ~rl~~ia~~a---~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~vG~GI-----------~t~e---~~~ 222 (262)
T 2ekc_A 161 KRIKLICEAA---DEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVVGFGV-----------SKKE---HAR 222 (262)
T ss_dssp HHHHHHHHHC---SSCEEEESSCC---------CHHHHHHHHHHHHHC-CSCEEEESSC-----------CSHH---HHH
T ss_pred HHHHHHHHhC---CCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEEeCCC-----------CCHH---HHH
Confidence 5677777776 5777777999999875432 4667777754 44432 1111 1112 334
Q ss_pred HHhhcCceeEEecchhhHhh
Q psy17297 190 HLIETSDETFCIDNEALYDI 209 (456)
Q Consensus 190 ~l~e~sd~~i~~~N~~l~~~ 209 (456)
.+...+|++|+= .++.+.
T Consensus 223 ~~~~gADgvIVG--Sai~~~ 240 (262)
T 2ekc_A 223 EIGSFADGVVVG--SALVKL 240 (262)
T ss_dssp HHHTTSSEEEEC--HHHHHH
T ss_pred HHHcCCCEEEEC--HHHHhh
Confidence 456779999984 355443
Done!