RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy17297
(456 letters)
>gnl|CDD|100016 cd02187, beta_tubulin, The tubulin superfamily includes five
distinct families, the alpha-, beta-, gamma-, delta-,
and epsilon-tubulins and a sixth family (zeta-tubulin)
which is present only in kinetoplastid protozoa. The
alpha- and beta-tubulins are the major components of
microtubules, while gamma-tubulin plays a major role in
the nucleation of microtubule assembly. The delta- and
epsilon-tubulins are widespread but unlike the alpha,
beta, and gamma-tubulins they are not ubiquitous among
eukaryotes. The alpha/beta-tubulin heterodimer is the
structural subunit of microtubules. The alpha- and
beta-tubulins share 40% amino-acid sequence identity,
exist in several isotype forms, and undergo a variety of
posttranslational modifications. The structures of
alpha- and beta-tubulin are basically identical: each
monomer is formed by a core of two beta-sheets
surrounded by alpha-helices. The monomer structure is
very compact, but can be divided into three regions
based on function: the amino-terminal nucleotide-binding
region, an intermediate taxol-binding region and the
carboxy-terminal region which probably constitutes the
binding surface for motor proteins.
Length = 425
Score = 846 bits (2187), Expect = 0.0
Identities = 315/425 (74%), Positives = 367/425 (86%), Gaps = 1/425 (0%)
Query: 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGG-YIP 60
REIVHIQ GQCGNQ G KFWE IS EHGL+ G Y+G SDLQLERI VY+NEA GG Y+P
Sbjct: 1 REIVHIQAGQCGNQIGAKFWEVISDEHGLDPTGTYKGDSDLQLERINVYFNEASGGKYVP 60
Query: 61 RAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTR 120
RAILVDLEPGTMD+VRSGP+G++FRPDNF+ GQSGA NNWAKGHYTEG EL+D+V+D+ R
Sbjct: 61 RAILVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVR 120
Query: 121 REAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVE 180
+EAE+CDC+QGFQ+THSLGGGTGSGMGTLL++KIREEYPDR++ FSV PSPKVSDTVVE
Sbjct: 121 KEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMATFSVFPSPKVSDTVVE 180
Query: 181 PYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCLR 240
PYNA LS+ L+E SDETFCIDNEALYDIC R+LKL +P+Y DLNHLVSA M GITTCLR
Sbjct: 181 PYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSAVMSGITTCLR 240
Query: 241 FPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMV 300
FPGQLN+DLRKLAVNMVPFPRLHFFM G APL S Y+A+++ ELTQ++FDAKNMM
Sbjct: 241 FPGQLNSDLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 300
Query: 301 ACDPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGF 360
ACDPRHG+YLT A IFRG +S+KE+D+ ++N+ N N Y+VEWIPNN+KTA+CDI P+G
Sbjct: 301 ACDPRHGRYLTAAAIFRGRVSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGL 360
Query: 361 KMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICE 420
KMS TFIGN+TAIQ LF+RI +QF +MFRRKAFLHWYT EGMDE EF EA +N+ DL+ E
Sbjct: 361 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 420
Query: 421 YQQYQ 425
YQQYQ
Sbjct: 421 YQQYQ 425
>gnl|CDD|240228 PTZ00010, PTZ00010, tubulin beta chain; Provisional.
Length = 445
Score = 782 bits (2022), Expect = 0.0
Identities = 305/442 (69%), Positives = 372/442 (84%), Gaps = 1/442 (0%)
Query: 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGG-YI 59
MREIVHIQ GQCGNQ G KFWE IS EHG++ G Y+G SDLQLERI VYYNEA GG Y+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPTGTYQGDSDLQLERINVYYNEATGGRYV 60
Query: 60 PRAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLT 119
PRA+L+DLEPGTMD+VR+GPYG++FRPDNF+ GQSGA NNWAKGHYTEG EL+D+V+D+
Sbjct: 61 PRAVLMDLEPGTMDSVRAGPYGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 120 RREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVV 179
R+EAE+CDC+QGFQ+THSLGGGTGSGMGTLL++K+REEYPDR++ FSV PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKLREEYPDRIMMTFSVFPSPKVSDTVV 180
Query: 180 EPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCL 239
EPYNA LS+ L+E +DE+ CIDNEALYDIC R+LKL +P+Y DLNHLVSA M G+T CL
Sbjct: 181 EPYNATLSVHQLVENADESMCIDNEALYDICFRTLKLTTPTYGDLNHLVSAVMSGVTCCL 240
Query: 240 RFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMM 299
RFPGQLN+DLRKLAVN+VPFPRLHFFM G APL S Y+ +S+ ELTQ++FDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRGLSVPELTQQMFDAKNMM 300
Query: 300 VACDPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKG 359
A DPRHG+YLT + +FRG +S KE+D+ ++N+ N N Y+VEWIPNNIK+++CDI PKG
Sbjct: 301 CAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKG 360
Query: 360 FKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEFEFHEAGANVEDLIC 419
KMS TFIGN+TAIQ +F+R+ +QF +MFRRKAFLHWYT EGMDE EF EA +N+ DL+
Sbjct: 361 LKMSVTFIGNSTAIQEMFRRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 420 EYQQYQEASIEDTVEIATSDDE 441
EYQQYQ+A++E+ E ++
Sbjct: 421 EYQQYQDATVEEEGEFDEEEEA 442
>gnl|CDD|215107 PLN00220, PLN00220, tubulin beta chain; Provisional.
Length = 447
Score = 780 bits (2017), Expect = 0.0
Identities = 299/446 (67%), Positives = 371/446 (83%), Gaps = 1/446 (0%)
Query: 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGG-YI 59
MREI+HIQ GQCGNQ G KFWE + EHG++ G Y G SDLQLERI VYYNEA GG Y+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGTYHGDSDLQLERINVYYNEASGGRYV 60
Query: 60 PRAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLT 119
PRA+L+DLEPGTMD+VRSGPYG++FRPDNF+ GQSGA NNWAKGHYTEG EL+D+V+D+
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 120 RREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVV 179
R+EAENCDC+QGFQV HSLGGGTGSGMGTLL++KIREEYPDRM+ FSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 180 EPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCL 239
EPYNA LS+ L+E +DE +DNEALYDIC R+LKL +PS+ DLNHL+SATM G+T CL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 240 RFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMM 299
RFPGQLN+DLRKLAVN++PFPRLHFFM G APL S Y+A+++ ELTQ+++DAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 300 VACDPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKG 359
A DPRHG+YLT + +FRG++S KE+D+ ++N+ N N Y+VEWIPNN+K+++CDI PKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 360
Query: 360 FKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEFEFHEAGANVEDLIC 419
KM+ TFIGN+T+IQ +F+R+ +QF +MFRRKAFLHWYT EGMDE EF EA +N+ DL+
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 420 EYQQYQEASIEDTVEIATSDDEKGDH 445
EYQQYQ+A+ ++ E ++E+
Sbjct: 421 EYQQYQDATADEEGEYEDEEEEEEYE 446
>gnl|CDD|227356 COG5023, COG5023, Tubulin [Cytoskeleton].
Length = 443
Score = 649 bits (1675), Expect = 0.0
Identities = 223/438 (50%), Positives = 298/438 (68%), Gaps = 4/438 (0%)
Query: 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEA-QGGYI 59
MREI+ +QVGQCGNQ G FWE + EHG+ G +SD ER V++ EA G ++
Sbjct: 1 MREIITLQVGQCGNQIGNAFWETLCLEHGIGPDGTLLDSSDEGDERFDVFFYEASDGKFV 60
Query: 60 PRAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLT 119
PRAILVDLEPG +D VR+GPYG +F P+N + G+ GA NNWA+GHYT G E++D VMD+
Sbjct: 61 PRAILVDLEPGVIDQVRNGPYGSLFHPENIIFGKEGAGNNWARGHYTVGKEIIDDVMDMI 120
Query: 120 RREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVV 179
RREA+ CD +QGF + HSLGGGTGSG+G+LLL ++REEYP ++ FSV P+PKVSD VV
Sbjct: 121 RREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPKVSDVVV 180
Query: 180 EPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCL 239
EPYN++L+L L+E SD TF +DNEALYDIC R+L++ +PSY DLN L+S M +TT L
Sbjct: 181 EPYNSVLTLHRLLENSDCTFVVDNEALYDICRRNLRIQNPSYDDLNQLISTVMSSVTTSL 240
Query: 240 RFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMM 299
RFPG LN DLR + N+VP+PRLHF + P S ++ S+ E+T +LFD KN M
Sbjct: 241 RFPGYLNVDLRSIQTNLVPYPRLHFPLVSYTPFTSDGSAAHEKNSVSEVTNQLFDPKNQM 300
Query: 300 VACDPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAP-- 357
V+CDPR G+Y+ V +FRG++ +++ + + + +VEW P K A+C P
Sbjct: 301 VSCDPRKGRYMAVCLLFRGDVDPRDVSRAVTRVQSKRTIQFVEWCPTGFKVAICKRPPSE 360
Query: 358 -KGFKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEFEFHEAGANVED 416
+SG + NTT+I F+RI DQF MF+++AFLHWY EGM+E EF EA +V D
Sbjct: 361 PAEVDVSGCMLSNTTSIAEAFKRIDDQFDLMFKKRAFLHWYVGEGMEEGEFSEAREDVAD 420
Query: 417 LICEYQQYQEASIEDTVE 434
L EY+ ++ S D E
Sbjct: 421 LEEEYEAAEQDSYLDDEE 438
>gnl|CDD|100023 cd06059, Tubulin, The tubulin superfamily includes five distinct
families, the alpha-, beta-, gamma-, delta-, and
epsilon-tubulins and a sixth family (zeta-tubulin) which
is present only in kinetoplastid protozoa. The alpha-
and beta-tubulins are the major components of
microtubules, while gamma-tubulin plays a major role in
the nucleation of microtubule assembly. The delta- and
epsilon-tubulins are widespread but unlike the alpha,
beta, and gamma-tubulins they are not ubiquitous among
eukaryotes. The alpha/beta-tubulin heterodimer is the
structural subunit of microtubules. The alpha- and
beta-tubulins share 40% amino-acid sequence identity,
exist in several isotype forms, and undergo a variety of
posttranslational modifications. The structures of
alpha- and beta-tubulin are basically identical: each
monomer is formed by a core of two beta-sheets
surrounded by alpha-helices. The monomer structure is
very compact, but can be divided into three regions
based on function: the amino-terminal nucleotide-binding
region, an intermediate taxol-binding region and the
carboxy-terminal region which probably constitutes the
binding surface for motor proteins. Also included in
this group is the mitochondrial Misato/DML1 protein
family, involved in mitochondrial fusion and in
mitochondrial distribution and morphology.
Length = 382
Score = 459 bits (1184), Expect = e-161
Identities = 185/422 (43%), Positives = 258/422 (61%), Gaps = 41/422 (9%)
Query: 3 EIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRA 62
EI+ IQ+GQCGNQ G KFWE
Sbjct: 1 EIISIQIGQCGNQIGNKFWEL--------------------------------------L 22
Query: 63 ILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTRRE 122
ILVDL+P ++ + G K+F P+ ++G+ G+ NNWA+G+YT G EL+D ++D R++
Sbjct: 23 ILVDLDPRVINEILQGQLSKLFDPNQLVNGKEGSGNNWARGYYTIGPELIDEILDRIRKQ 82
Query: 123 AENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVEPY 182
E CD +QGFQ+THSLGGGTGSG+G+LLL + +EYP +IN FS+ PSP+ S VVEPY
Sbjct: 83 VEKCDSLQGFQITHSLGGGTGSGLGSLLLELLSDEYPKILINTFSIFPSPQGSSNVVEPY 142
Query: 183 NAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCLRFP 242
N+ILSL+HL+E SD DNEALY+I R L ++ PS+ DLN++++ + IT LRFP
Sbjct: 143 NSILSLNHLLENSDSVILFDNEALYNILTRQLDIDEPSFDDLNNIIAQIISSITASLRFP 202
Query: 243 GQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVAC 302
G LN DLRKLA N+VPFPRLHF APL+S + +++ ++ ELF+ N +C
Sbjct: 203 GYLNFDLRKLATNLVPFPRLHFLTPSFAPLISYDSQTTEKLNLLQIINELFNNDNSFFSC 262
Query: 303 DPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKG-FK 361
DP G+YL A IFRG++ EI + I + N WIP+ K + C P+
Sbjct: 263 DPTKGRYLAAALIFRGDVFQSEIQEAINKLKNKL--NIQSWIPDGFKVSNCKKPPRAELG 320
Query: 362 MSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEY 421
S F+ N+T+I +R++++F +++RKAFLHWY EGMDE EF EA +++EDLI Y
Sbjct: 321 KSALFLSNSTSIGESLERLIEKFDKLYKRKAFLHWYLGEGMDEMEFTEAESSLEDLIQSY 380
Query: 422 QQ 423
Q+
Sbjct: 381 QE 382
>gnl|CDD|100015 cd02186, alpha_tubulin, The tubulin superfamily includes five
distinct families, the alpha-, beta-, gamma-, delta-,
and epsilon-tubulins and a sixth family (zeta-tubulin)
which is present only in kinetoplastid protozoa. The
alpha- and beta-tubulins are the major components of
microtubules, while gamma-tubulin plays a major role in
the nucleation of microtubule assembly. The delta- and
epsilon-tubulins are widespread but unlike the alpha,
beta, and gamma-tubulins they are not ubiquitous among
eukaryotes. The alpha/beta-tubulin heterodimer is the
structural subunit of microtubules. The alpha- and
beta-tubulins share 40% amino-acid sequence identity,
exist in several isotype forms, and undergo a variety of
posttranslational modifications. The structures of
alpha- and beta-tubulin are basically identical: each
monomer is formed by a core of two beta-sheets
surrounded by alpha-helices. The monomer structure is
very compact, but can be divided into three regions
based on function: the amino-terminal nucleotide-binding
region, an intermediate taxol-binding region and the
carboxy-terminal region which probably constitutes the
binding surface for motor proteins.
Length = 434
Score = 429 bits (1106), Expect = e-148
Identities = 172/439 (39%), Positives = 262/439 (59%), Gaps = 18/439 (4%)
Query: 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRY--EGTSDLQLERIQVYYNEAQGG-Y 58
RE++ I +GQ G Q G WE EHG+ G+ + T + +++E G +
Sbjct: 1 REVISIHIGQAGIQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFSETGSGKH 60
Query: 59 IPRAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDL 118
+PRA+ +DLEP +D VR+G Y ++F P+ + G+ AANN+A+GHYT G E++D V+D
Sbjct: 61 VPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIIDLVLDR 120
Query: 119 TRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTV 178
R+ A+NC +QGF + HS GGGTGSG G+LLL ++ +Y + F+V PSP+VS V
Sbjct: 121 IRKLADNCTGLQGFLIFHSFGGGTGSGFGSLLLERLSVDYGKKSKLEFTVYPSPQVSTAV 180
Query: 179 VEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTC 238
VEPYN++L+ L+E SD +F +DNEA+YDIC R+L + P+Y +LN L++ + IT
Sbjct: 181 VEPYNSVLTTHSLLEHSDCSFMVDNEAIYDICRRNLDIERPTYTNLNRLIAQVVSSITAS 240
Query: 239 LRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNM 298
LRF G LN DL + N+VP+PR+HF + AP++S ++ +S+ E+T F+ N
Sbjct: 241 LRFDGALNVDLNEFQTNLVPYPRIHFPLVSYAPIISAEKAYHEQLSVAEITNACFEPANQ 300
Query: 299 MVACDPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALC----- 353
MV CDPRHGKY+ ++RG++ K+++ + I +V+W P K +
Sbjct: 301 MVKCDPRHGKYMACCLLYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKVGINYQPPT 360
Query: 354 -----DIAPKGFKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEFEFH 408
D+A + + + NTTAI + R+ +F M+ ++AF+HWY EGM+E EF
Sbjct: 361 VVPGGDLAKV--QRAVCMLSNTTAIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFS 418
Query: 409 EAGANVEDLICEYQQYQEA 427
EA EDL + Y+E
Sbjct: 419 EA---REDLAALEKDYEEV 434
>gnl|CDD|185562 PTZ00335, PTZ00335, tubulin alpha chain; Provisional.
Length = 448
Score = 406 bits (1044), Expect = e-139
Identities = 175/455 (38%), Positives = 268/455 (58%), Gaps = 18/455 (3%)
Query: 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYE--GTSDLQLERIQVYYNE-AQGG 57
MRE++ I +GQ G Q G WE EHG+ G+ ++ + +++E G
Sbjct: 1 MREVISIHIGQAGIQVGNACWELFCLEHGIQPDGQMPSDKNIGVEDDAFNTFFSETGAGK 60
Query: 58 YIPRAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMD 117
++PR + +DLEP +D VR+G Y ++F P+ + G+ AANN+A+GHYT G E+VD +D
Sbjct: 61 HVPRCVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 118 LTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDT 177
R+ A+NC +QGF V H++GGGTGSG+G+LLL ++ +Y + F++ PSP+VS
Sbjct: 121 RIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 178 VVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITT 237
VVEPYN++LS L+E +D +DNEA+YDIC R+L + P+Y +LN L++ + +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTA 240
Query: 238 CLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKN 297
LRF G LN DL + N+VP+PR+HF +S AP++S ++ +S+ E+T F+ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPAN 300
Query: 298 MMVACDPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALC---- 353
MM CDPRHGKY+ ++RG++ K+++ I I +V+W P K +
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 354 DIAPKG----FKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEFEFHE 409
+ P G + + I N+TAI +F RI +F M+ ++AF+HWY EGM+E EF E
Sbjct: 361 TVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 410 AGANVEDLICEYQQYQEASIEDTVEIATSDDEKGD 444
A EDL + Y+E E A + E+
Sbjct: 421 AR---EDLAALEKDYEEVGA----ESADEEGEEDV 448
>gnl|CDD|177802 PLN00221, PLN00221, tubulin alpha chain; Provisional.
Length = 450
Score = 387 bits (995), Expect = e-131
Identities = 177/455 (38%), Positives = 266/455 (58%), Gaps = 20/455 (4%)
Query: 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGR--YEGTSDLQLERIQVYYNEAQGG- 57
MRE + I +GQ G Q G WE EHG+ G+ + T + +++E G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 58 YIPRAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMD 117
++PRA+ VDLEP +D VR+G Y ++F P+ + G+ AANN+A+GHYT G E+VD +D
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 118 LTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDT 177
R+ A+NC +QGF V +++GGGTGSG+G+LLL ++ +Y + F+V PSP+VS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTA 180
Query: 178 VVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITT 237
VVEPYN++LS L+E +D +DNEA+YDIC RSL + P+Y +LN L+S + +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTA 240
Query: 238 CLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKN 297
LRF G LN D+ + N+VP+PR+HF +S AP++S ++ +S+ E+T F+ +
Sbjct: 241 SLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPAS 300
Query: 298 MMVACDPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDI-- 355
MM CDPRHGKY+ ++RG++ K+++ + I +V+W P K C I
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFK---CGINY 357
Query: 356 -----APKG----FKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEFE 406
P G + + I N+TA+ +F RI +F M+ ++AF+HWY EGM+E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 407 FHEAGANVEDLICEYQQYQEASIEDTVEIATSDDE 441
F EA EDL + Y+E E +E
Sbjct: 418 FSEAR---EDLAALEKDYEEVGAESAEGEGDEGEE 449
>gnl|CDD|100017 cd02188, gamma_tubulin, Gamma-tubulin is a ubiquitous
phylogenetically conserved member of tubulin
superfamily. Gamma is a low abundance protein present
within the cells in both various types of
microtubule-organizing centers and cytoplasmic protein
complexes. Gamma-tubulin recruits the
alpha/beta-tubulin dimers that form the minus ends of
microtubules and is thought to be involved in
microtubule nucleation and capping.
Length = 431
Score = 380 bits (979), Expect = e-129
Identities = 161/433 (37%), Positives = 256/433 (59%), Gaps = 15/433 (3%)
Query: 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGG-YIP 60
REI+ +QVGQCGNQ G +FW+++ EHG++ G E + +R V++ +A Y+P
Sbjct: 1 REIITLQVGQCGNQIGSEFWKQLCAEHGISPDGILEDFATDGGDRKDVFFYQADDEHYVP 60
Query: 61 RAILVDLEPGTMDAVRSGPYGKMFRPDNFL---HGQSGAANNWAKGHYTEGVELVDAVMD 117
RAIL+DLEP ++++++ Y ++ P+N HG GA NNWA G Y++G E+ + ++D
Sbjct: 61 RAILIDLEPRVINSIQNSEYRNLYNPENIFLSKHG-GGAGNNWASG-YSQGEEVQEEILD 118
Query: 118 LTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVP-SPKVSD 176
+ REA+ D ++GF + HS+ GGTGSGMG+ LL ++ + YP ++I +SV P + SD
Sbjct: 119 IIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLERLNDRYPKKLIQTYSVFPNQDESSD 178
Query: 177 TVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGIT 236
VV+PYN+IL+L LI +D +DN AL I L + +P++ +N LVS M T
Sbjct: 179 VVVQPYNSILTLKRLILNADCVVVLDNTALNRIATDRLHIQNPTFDQINSLVSTVMSAST 238
Query: 237 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLI-DYKAMSIGELTQELFDA 295
T LR+PG +N DL L +++P PRLHF M+ PL S + + ++ ++ + L
Sbjct: 239 TTLRYPGYMNNDLISLIASLIPTPRLHFLMTSYTPLTSDQIAASVRKTTVLDVMRRLLQP 298
Query: 296 KNMMVACDP-RHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCD 354
KN+MV+ ++G Y+++ I +GE+ ++ + I L ++ W P +I+ AL
Sbjct: 299 KNIMVSTATRKNGCYISILNIIQGEVDPTQVHKSLQRIRERRLANFIPWGPASIQVALSK 358
Query: 355 IAP---KGFKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEF---EFH 408
+P ++SG + N T+I LF+RI+ QF + +R+AFL Y E M EF
Sbjct: 359 KSPYVPTAHRVSGLMLANHTSIASLFERILKQFDKLRKRRAFLDNYRKEDMFSDNLDEFD 418
Query: 409 EAGANVEDLICEY 421
E+ V+ LI EY
Sbjct: 419 ESREVVQSLIEEY 431
>gnl|CDD|100014 cd00286, Tubulin_FtsZ, Tubulin/FtsZ: Family includes tubulin
alpha-, beta-, gamma-, delta-, and epsilon-tubulins as
well as FtsZ, all of which are involved in polymer
formation. Tubulin is the major component of
microtubules, but also exists as a heterodimer and as a
curved oligomer. Microtubules exist in all eukaryotic
cells and are responsible for many functions, including
cellular transport, cell motility, and mitosis. FtsZ
forms a ring-shaped septum at the site of bacterial cell
division, which is required for constriction of cell
membrane and cell envelope to yield two daughter cells.
FtsZ can polymerize into tubes, sheets, and rings in
vitro and is ubiquitous in eubacteria, archaea, and
chloroplasts.
Length = 328
Score = 366 bits (941), Expect = e-125
Identities = 146/369 (39%), Positives = 202/369 (54%), Gaps = 42/369 (11%)
Query: 3 EIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPRA 62
EIV IQ+GQ GNQ G KFWE++
Sbjct: 1 EIVTIQLGQAGNQIGAKFWEQL-------------------------------------- 22
Query: 63 ILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTRRE 122
+LVD EPG +D SGPY +F + GA NNWA GH T G E + ++D+ R+E
Sbjct: 23 VLVDTEPGVIDETLSGPYRLLFCIGQLITHGGGAGNNWAFGHETAGEEYQEEILDIIRKE 82
Query: 123 AENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVEPY 182
AE CD +QGF +THSLGGGTGSG+G +L ++++EYP R+ FS++P P +V PY
Sbjct: 83 AEECDSLQGFFITHSLGGGTGSGLGPVLAERLKDEYPKRLKITFSILPGPDEG-VIVRPY 141
Query: 183 NAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCLRFP 242
N+IL+L L E SD IDNEAL+DIC R L ++ P++ +N L++ + +TT LRF
Sbjct: 142 NSILTLHTLTEHSDCLVVIDNEALFDICPRPLHIDKPTFDHINELLATALSSLTTPLRFD 201
Query: 243 GQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVAC 302
G LN DLR+L+ N+VPFPRLHF M G APL S + + EL ++ +KN MV C
Sbjct: 202 GSLNVDLRELSENLVPFPRLHFLMVGYAPLDSEGSATPTTLRVAELVRQALRSKNQMVVC 261
Query: 303 DPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAP-KGFK 361
DP HG Y+ + RG +S E+ + I + ++ W P IK + P K
Sbjct: 262 DPTHGGYIAALLLVRGPVSPSEVREGIARVAPRTS--HLSWSPPGIKVGVSPTPPASEHK 319
Query: 362 MSGTFIGNT 370
+S + N+
Sbjct: 320 VSALLLSNS 328
>gnl|CDD|215108 PLN00222, PLN00222, tubulin gamma chain; Provisional.
Length = 454
Score = 323 bits (829), Expect = e-106
Identities = 156/439 (35%), Positives = 252/439 (57%), Gaps = 20/439 (4%)
Query: 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQG-GYIP 60
REI+ +QVGQCGNQ G++FW+++ EHG+++ G E + +R V++ +A YIP
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDEHYIP 62
Query: 61 RAILVDLEPGTMDAVRSGPYGKMFRPDNFL---HGQSGAANNWAKGHYTEGVELVDAVMD 117
RA+L+DLEP ++ +++ Y ++ +N HG GA NNWA G Y +G ++ + +MD
Sbjct: 63 RALLIDLEPRVINGIQNSEYRNLYNHENIFVSDHG-GGAGNNWASG-YHQGEQVEEDIMD 120
Query: 118 LTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPS-PKVSD 176
+ REA+ D ++GF + HS+ GGTGSGMG+ LL + + Y +++ +SV P+ + SD
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSD 180
Query: 177 TVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGIT 236
VV+PYN++L+L L +D +DN AL I V L L +P++ N LVS M T
Sbjct: 181 VVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVDRLHLENPTFAQTNSLVSTVMSAST 240
Query: 237 TCLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNAPL-VSPSLIDYKAMSIGELTQELFDA 295
T LR+PG +N DL L +++P PR HF M+G PL V + ++ ++ + L
Sbjct: 241 TTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQT 300
Query: 296 KNMMVACDPR-----HGKYLTVATIFRGELSVKEIDDHIVNIHNNNLPYYVEWIPNNIKT 350
KN+MV+ R KY+++ I +GE+ ++ + I L ++EW P +I+
Sbjct: 301 KNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHKSLQRIRERKLANFIEWGPASIQV 360
Query: 351 ALCDIAP---KGFKMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGM----D 403
AL +P ++SG + N T+I+ LF + + Q+ + +++AFL Y M D
Sbjct: 361 ALSRKSPYVQTAHRVSGLMLANHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADND 420
Query: 404 EFEFHEAGANVEDLICEYQ 422
EF E+ VE L+ EY+
Sbjct: 421 LSEFDESREIVESLVDEYK 439
>gnl|CDD|100019 cd02190, epsilon_tubulin, The tubulin superfamily includes five
distinct families, the alpha-, beta-, gamma-, delta-,
and epsilon-tubulins and a sixth family (zeta-tubulin)
which is present only in kinetoplastid protozoa. The
epsilon-tubulins which are widespread but not ubiquitous
among eukaryotes play a role in basal body/centriole
morphogenesis.
Length = 379
Score = 313 bits (805), Expect = e-104
Identities = 140/423 (33%), Positives = 224/423 (52%), Gaps = 46/423 (10%)
Query: 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIPR 61
REI+ +QVGQCGNQ G +FW+ +EH L+ R
Sbjct: 1 REIIVVQVGQCGNQIGCRFWDLALREH-------------LK----------------AR 31
Query: 62 AILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTRR 121
A+L+D+E G ++ + GP +F + SGA NNWA G++ G + +D++++ R+
Sbjct: 32 AVLIDMEEGVVNEILKGPLRDLFDETQLVTDVSGAGNNWAVGYHQYGHQYIDSILEKIRK 91
Query: 122 EAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVEP 181
AE CD +Q F + HSLGGGTGSG+GT +L + +E+P+ SV PS D + P
Sbjct: 92 AAEKCDSLQSFFILHSLGGGTGSGLGTYVLELLADEFPEVYRFVTSVYPS-ADDDVITSP 150
Query: 182 YNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCLRF 241
YN++L+L LIE +D I+N+AL + +N +V+ + +T+ +RF
Sbjct: 151 YNSVLALRELIEHADCVLPIENQALVP------------FDAMNSIVANLLLNLTSSMRF 198
Query: 242 PGQLNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVA 301
G LN DL ++ +N+VPFPRLHF +S +PL + ++ + ++ + F + ++
Sbjct: 199 EGSLNVDLNEITMNLVPFPRLHFLVSSLSPLYPLADVNVPPRRLDQMFSDAFSRNHQLIR 258
Query: 302 CDPRHGKYLTVATIFRGELSVKEIDDHIVNIHNN-NLPYYVEWIPNNIKTALCDIAPKGF 360
DP+HG YL A + RG +SV ++ +I + W K LC + P G
Sbjct: 259 ADPKHGLYLACALLVRGNVSVSDLRRNIERLKPKLKFVK---WNQEGWKIGLCSVPPVGH 315
Query: 361 KMSGTFIGNTTAIQGLFQRIMDQFCSMFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICE 420
S + N T I+G F + ++F +++RKA LH YT GM++ +F EA ++ +LI E
Sbjct: 316 SYSLLCLANNTCIKGTFTELKERFMKLYKRKAHLHHYTQVGMEQGDFTEALESISNLIDE 375
Query: 421 YQQ 423
Y
Sbjct: 376 YDY 378
>gnl|CDD|240395 PTZ00387, PTZ00387, epsilon tubulin; Provisional.
Length = 465
Score = 315 bits (809), Expect = e-103
Identities = 151/458 (32%), Positives = 240/458 (52%), Gaps = 37/458 (8%)
Query: 1 MREIVHIQVGQCGNQTGVKFWEEISQEH-GLNEMGRYEGTSDLQLERIQVYYNEAQGGYI 59
REIV +QVGQCGNQ G +FW+ +EH +N +Y+ D E + N +
Sbjct: 1 PREIVTVQVGQCGNQLGHRFWDVALKEHKKINANPQYDDARDSFFENVSENVNRPGKENL 60
Query: 60 -PRAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDL 118
RA+LVD+E G ++ + P G +F + F+ SGA NNWA GH G + +D++ +
Sbjct: 61 KARAVLVDMEEGVLNQILKSPLGDLFDENFFVSDVSGAGNNWAVGHMEYGDKYIDSISES 120
Query: 119 TRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSP-KVSDT 177
RR+ E CD +Q F + HSLGGGTGSG+GT +L + +E+P + F V P V D
Sbjct: 121 VRRQVEQCDSLQSFFLMHSLGGGTGSGLGTRILGMLEDEFPH--VFRFCPVVFPSAVDDV 178
Query: 178 VVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPS----------------- 220
+ PYN+ +L LIE +D +DN+AL +I +L
Sbjct: 179 ITSPYNSFFALRELIEHADCVLPLDNDALANIADSALSRKKKKLAKGNIKRGPQPHKYSV 238
Query: 221 ----------YRDLNHLVSATMCGITTCLRFPGQLNADLRKLAVNMVPFPRLHFFMSGNA 270
Y +N++V+ + +T+ +RF G LN D+ ++ N+VP+PRLHF S A
Sbjct: 239 AKPTETKKLPYDKMNNIVAQLLSNLTSSMRFEGSLNVDINEITTNLVPYPRLHFLTSSIA 298
Query: 271 PLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIFRGELSVKEIDDHIV 330
PLVS + + ++ ++ D + MVA P GKYL A I RG +V ++ +I+
Sbjct: 299 PLVSLKDVAVGPRRLDQMFKDCLDPDHQMVAATPEAGKYLATALIVRGPQNVSDVTRNIL 358
Query: 331 NIHNN-NLPYYVEWIPNNIKTALCDIAPKGFKMSGTFIGNTTAIQGLFQRIMDQFCSMFR 389
+ N+ Y W + KT LC+++P G S + N I+ F+ ++++F +++
Sbjct: 359 RLKEQLNMIY---WNEDGFKTGLCNVSPLGQPYSLLCLANNCCIRNKFESMLERFNKLYK 415
Query: 390 RKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQQYQEA 427
RK+ +H YT E +++ F E +++LI +Y Q A
Sbjct: 416 RKSHVHHYT-EYLEQAYFDETLETIQNLIDDYAYLQTA 452
>gnl|CDD|100018 cd02189, delta_tubulin, The tubulin superfamily includes five
distinct families, the alpha-, beta-, gamma-, delta-,
and epsilon-tubulins and a sixth family (zeta-tubulin)
which is present only in kinetoplastid protozoa. The
alpha- and beta-tubulins are the major components of
microtubules, while gamma-tubulin plays a major role in
the nucleation of microtubule assembly. The delta- and
epsilon-tubulins are widespread but unlike the alpha,
beta, and gamma-tubulins they are not ubiquitous among
eukaryotes. Delta-tubulin plays an essential role in
forming the triplet microtubules of centrioles and basal
bodies.
Length = 446
Score = 242 bits (621), Expect = 1e-75
Identities = 115/459 (25%), Positives = 202/459 (44%), Gaps = 55/459 (11%)
Query: 4 IVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQ---GGYIP 60
+V +Q+GQCGNQ G + ++ +++E + ER ++ G I
Sbjct: 2 VVTVQLGQCGNQLGHELFDTLAKE------ASSSDDEGYKYERDAQERFFSEKSDGQPIA 55
Query: 61 RAILVDLEPGTMDAVRSGPYGKM--FRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDL 118
R++LVD+EP +++ S G + N + QSG+ NNWA G+Y G ++ + ++DL
Sbjct: 56 RSVLVDMEPKVIESTLSKSSGGTWKYDKKNVICQQSGSGNNWAYGYYVHGPQIKEDILDL 115
Query: 119 TRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTV 178
R+E E CD +GF V HSL GGTGSG+G+ + +R+EYP+ ++ V P + +
Sbjct: 116 IRKEVEKCDSFEGFLVLHSLAGGTGSGLGSRVTELLRDEYPESLLLNIVVWPY-TTGEVI 174
Query: 179 VEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGI--- 235
V+ YN +L+L+HL E+SD ++N+ ++ IC + L + S D+N +++ + +
Sbjct: 175 VQNYNTVLTLAHLYESSDAIILLENDDIHRICSKLRNLKNVSLSDINKVIAHQLASLLQP 234
Query: 236 --TTCLRFPGQLNADLRKLAVNM-----VPFPRLHFFMSGNAPLVSPSLIDYKAMSIGEL 288
+ A +N P P + P + + + S L
Sbjct: 235 SLDSTGSNGA--LAGRSTNPLNDLVEDLCPHPAYKLLTIRSLPQMPEKSLAFSTFSWSAL 292
Query: 289 TQELFD---AKNMMVACDPRHG-------------------KYLTVATIFRGELSVKEID 326
+ L A + M K L I RG+ +
Sbjct: 293 LKRLHQMLIAGSFMEEGIDWTVRPEGSAASLLSGNKSTHFNKSLANLLILRGKDVTSADE 352
Query: 327 DHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGFK---MSGTFIGNTTAIQGLFQRIMDQ 383
+ YV W P+ ++ + + F S T + N+ I I+++
Sbjct: 353 RKF-----RDPLLYVNWSPSPVRFS-ISSHKRSFSKYEKSVTLVSNSQTIIDPLDNILEK 406
Query: 384 FCSMFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEYQ 422
+MF A+LH Y G++E +F +A A +E +I Y+
Sbjct: 407 AWNMFASGAYLHQYEKYGLEEEDFLDAFATLEQIIASYK 445
>gnl|CDD|215710 pfam00091, Tubulin, Tubulin/FtsZ family, GTPase domain. This
family includes the tubulin alpha, beta and gamma
chains, as well as the bacterial FtsZ family of
proteins. Members of this family are involved in polymer
formation. FtsZ is the polymer-forming protein of
bacterial cell division. It is part of a ring in the
middle of the dividing cell that is required for
constriction of cell membrane and cell envelope to yield
two daughter cells. FtsZ and tubulin are GTPases. FtsZ
can polymerise into tubes, sheets, and rings in vitro
and is ubiquitous in eubacteria and archaea. Tubulin is
the major component of microtubules.
Length = 210
Score = 231 bits (592), Expect = 3e-74
Identities = 82/221 (37%), Positives = 121/221 (54%), Gaps = 12/221 (5%)
Query: 4 IVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGG-YIPRA 62
I+ I VG GN G WE + +EHG++ G ++I V++ E+ G Y PR
Sbjct: 1 IIVIGVGGAGNNIGNALWELLCKEHGIDPDG-----MLFHADKINVFFEESGDGVYGPRF 55
Query: 63 ILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGVELVDAVMDLTRRE 122
I +D +P ++ +++G K+F +N G GA NN A G+YT E + ++ R+E
Sbjct: 56 IAIDTDPQVLNEIKAGN--KLFIGNNLTKGLEGAGNNPAVGYYT-HKEAAEESLEEIRKE 112
Query: 123 AENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVEPY 182
E CD + GF +T LGGGTGSG ++ ++E Y + A P S+ VV PY
Sbjct: 113 LEKCDGLDGFFITAGLGGGTGSGAAPVIAEILKELY-GALTVAVVTFPF--TSEGVVRPY 169
Query: 183 NAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPSYRD 223
NAIL L LIE SD IDN+AL +IC L + SP++++
Sbjct: 170 NAILGLKELIEHSDSVIVIDNDALLEICDNQLDIKSPAFKN 210
>gnl|CDD|214867 smart00864, Tubulin, Tubulin/FtsZ family, GTPase domain. This
domain is found in all tubulin chains, as well as the
bacterial FtsZ family of proteins. These proteins are
involved in polymer formation. Tubulin is the major
component of microtubules, while FtsZ is the
polymer-forming protein of bacterial cell division, it
is part of a ring in the middle of the dividing cell
that is required for constriction of cell membrane and
cell envelope to yield two daughter cells. FtsZ and
tubulin are GTPases, this entry is the GTPase domain.
FtsZ can polymerise into tubes, sheets, and rings in
vitro and is ubiquitous in bacteria and archaea.
Length = 192
Score = 220 bits (562), Expect = 5e-70
Identities = 76/203 (37%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 46 RIQVYYNEAQGGYIPRAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHY 105
+I+V+ GG P A+ VDLEPG +D VR+ + P++ G+ A NNW +G
Sbjct: 1 KIKVFG---VGGGGPNAVNVDLEPGVIDGVRANTDAQALNPESLASGKIQAGNNWTRGLG 57
Query: 106 T-----EGVELVDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPD 160
G E + +D R E E D G +T +GGGTG+G ++ +I +EY
Sbjct: 58 AGADPEVGREAAEESLDEIREELEGAD---GVFITAGMGGGTGTGAAPVIA-EIAKEYGI 113
Query: 161 RMINAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDICVRSLKLNSPS 220
+ +VV P + VV PYNA L L L E D IDN+AL DIC R L L P+
Sbjct: 114 LTV---AVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDALLDICGRKLPLR-PA 169
Query: 221 YRDLNHLVSATMCGITTCLRFPG 243
++D N L++ + GIT +RFPG
Sbjct: 170 FKDANDLLAQAVSGITDLIRFPG 192
>gnl|CDD|217812 pfam03953, Tubulin_C, Tubulin C-terminal domain. This family
includes the tubulin alpha, beta and gamma chains.
Members of this family are involved in polymer
formation. Tubulins are GTPases. FtsZ can polymerise
into tubes, sheets, and rings in vitro and is ubiquitous
in eubacteria and archaea. Tubulin is the major
component of microtubules. (The FtsZ GTPases have been
split into their won family).
Length = 126
Score = 185 bits (471), Expect = 2e-57
Identities = 67/124 (54%), Positives = 84/124 (67%), Gaps = 3/124 (2%)
Query: 260 PRLHFFMSGNAPLVSPSLIDYKAMSIGELTQELFDAKNMMVACDPRHGKYLTVATIFRGE 319
PRLHF M+G APL S ++ S+ ELT++LFD KNMMVACDPRHGKYL+ A + RG+
Sbjct: 1 PRLHFLMTGYAPLTSKGKASHRKTSVLELTRQLFDPKNMMVACDPRHGKYLSCALLIRGD 60
Query: 320 LSVKEIDDHIVNIHNNNLPYYVEWIPNNIKTALCDIAPKGFKM---SGTFIGNTTAIQGL 376
+S KE+ I I N +VEWIPN+IK A+CD+ P G SG + NTTAIQ L
Sbjct: 61 VSPKEVHKAIQRIQEKNSANFVEWIPNSIKVAICDVPPYGLPGSDVSGLMLANTTAIQEL 120
Query: 377 FQRI 380
F+RI
Sbjct: 121 FKRI 124
>gnl|CDD|214868 smart00865, Tubulin_C, Tubulin/FtsZ family, C-terminal domain.
This domain is found in the tubulin alpha, beta and
gamma chains, as well as the bacterial FtsZ family of
proteins. These proteins are GTPases and are involved in
polymer formation. Tubulin is the major component of
microtubules, while FtsZ is the polymer-forming protein
of bacterial cell division, it is part of a ring in the
middle of the dividing cell that is required for
constriction of cell membrane and cell envelope to yield
two daughter cells. FtsZ can polymerise into tubes,
sheets, and rings in vitro and is ubiquitous in bacteria
and archaea. This is the C-terminal domain.
Length = 120
Score = 83.4 bits (207), Expect = 2e-19
Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 26/142 (18%)
Query: 245 LNADLRKLAVNMVPFPRLHFFMSGNAPLVSPSLIDYKAMSIGELTQE--LFDAKNMMVAC 302
+N D + MVP F M G P + +A+ EL L + N+M A
Sbjct: 1 INVDFADVKTVMVPMG---FAMMGIGPASG----ENRALEAAELAISSPLLEDSNIMGAK 53
Query: 303 DPRHGKYLTVATIFRGELSVKEIDDHIVNIHNNNLP-YYVEWIPNNIKTALCDIAPKGFK 361
+T +L++KE+++ + I P ++ W P +
Sbjct: 54 GVLV--NITGGP----DLTLKEVNEAMERIREKADPDAFIIWGPVIDEEL---------G 98
Query: 362 MSGTFIGN-TTAIQGLFQRIMD 382
+ T I LF+R+ +
Sbjct: 99 GDEIRVTVIATGIGSLFKRLSE 120
>gnl|CDD|100022 cd02202, FtsZ_type2, FtsZ is a GTPase that is similar to the
eukaryotic tubulins and is essential for cell division
in prokaryotes. FtsZ is capable of polymerizing in a
GTP-driven process into structures similar to those
formed by tubulin. FtsZ forms a ring-shaped septum at
the site of bacterial cell division, which is required
for constriction of cell membrane and cell envelope to
yield two daughter cells.
Length = 349
Score = 57.4 bits (139), Expect = 5e-09
Identities = 49/216 (22%), Positives = 71/216 (32%), Gaps = 48/216 (22%)
Query: 1 MREIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEAQGGYIP 60
MR ++ I VGQ G + ++ + GY
Sbjct: 1 MRVLI-IGVGQAGGRIVDALNRH-------DKRSGF--------------------GYCV 32
Query: 61 RAILVDLEPGTMDAVRSGPYGKMFRPDNFLHGQSGAANNWAKGHYTEGV-ELVDAVMDLT 119
A+ ++ + ++ P D L GQS KGH EL V +
Sbjct: 33 GALAINTAKNDLKGLKHIP-----AEDRILIGQSEV-----KGHGVGADRELGAEVAEED 82
Query: 120 RREAENC------DCMQGFQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPK 173
E V LGGGTGSG G +L K +E + + A V+P+
Sbjct: 83 LEEVMRAIDDRGTSDADAILVIAGLGGGTGSG-GAPVLAKELKERYEEPVYALGVLPAR- 140
Query: 174 VSDTVVEPYNAILSLSHLIETSDETFCIDNEALYDI 209
+ NA SL L E +D DN+A
Sbjct: 141 -EEGERYSANAARSLDALSEEADAIILFDNDAWKRK 175
>gnl|CDD|100024 cd06060, misato, Human Misato shows similarity with Tubulin/FtsZ
family of GTPases and is localized to the the outer
membrane of mitochondria. It has a role in mitochondrial
fusion and in mitochondrial distribution and morphology.
Mutations in its Drosophila homolog (misato) lead to
irregular chromosome segregation during mitosis.
Deletion of the budding yeast homolog DML1 is lethal and
unregulate expression of DML1 leads to mitochondrial
dispersion and abnormalities in cell morphology. The
Misato/DML1 protein family is conserved from yeast to
human, but its exact function is still unknown.
Length = 493
Score = 54.7 bits (132), Expect = 5e-08
Identities = 56/238 (23%), Positives = 84/238 (35%), Gaps = 53/238 (22%)
Query: 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNEA-----QG 56
RE++ +Q+G N G +W QE Y+ S V Y E Q
Sbjct: 1 REVLTLQLGHYANFVGTHWWNL--QEANFG----YDPDSPASELDHDVLYREGRTRQGQV 54
Query: 57 GYIPRAILVDLEPGTMDAVRSGPYGKMFRPDN-------FL----------------HGQ 93
Y PR +L+DL+ GT+ + K++ + +L H
Sbjct: 55 TYTPRLLLLDLK-GTLGHLPEEGSLKVYNLEASVNVWSDYLYARLHPRSINVINQYNHDG 113
Query: 94 SGAANNWAKGHYTEGVEL------VDAVMDLTRREAENCDCMQGFQVTHSLGGGTGSGMG 147
+ + +G L + D R E CD +QGFQV L G SG+G
Sbjct: 114 TSQPFE----VFGQGESLWQDESFQEEFEDRLRFYVEECDYLQGFQVLCDLHDGF-SGVG 168
Query: 148 TLLLTKIREEYPDRMINAFSVVPSPKVSDT-----VVEPYNAILSLSHLIETSDETFC 200
L +++EY + F +P D + N L L+ L E S F
Sbjct: 169 AKCLEHLQDEYGKASL-LFPGLPPVIPPDASSDKNSIRVLNTALGLAQLSEHSS-LFV 224
>gnl|CDD|100020 cd02191, FtsZ, FtsZ is a GTPase that is similar to the eukaryotic
tubulins and is essential for cell division in
prokaryotes. FtsZ is capable of polymerizing in a
GTP-driven process into structures similar to those
formed by tubulin. FtsZ forms a ring-shaped septum at
the site of bacterial cell division, which is required
for constriction of cell membrane and cell envelope to
yield two daughter cells.
Length = 303
Score = 37.9 bits (88), Expect = 0.008
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 132 FQVTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHL 191
+T LGGGTG+G ++ ++ +VV P + + NA L
Sbjct: 88 VFITAGLGGGTGTGGAPVVAEHLKRIG----TLTVAVVTLPFSDEGGIRMLNAAEGFQTL 143
Query: 192 IETSDETFCIDNEALYDIC-VRSLKLNSPSYRDLNHLVSATMCGITTCLRFPGQLNAD 248
+ D I NE L I SL+ ++ + ++ + G+ + G++N D
Sbjct: 144 VREVDNLMVIPNEKLRQIGEKASLEG---AFDHADEVLVRAVGGLFGAIEIEGEINVD 198
>gnl|CDD|220832 pfam10644, Misat_Myo_SegII, Misato Segment II myosin-like domain.
The misato protein contains three distinct, conserved
domains, segments I, II and III. Segments I and III are
common to Tubulins pfam00091, but segment II aligns
with myosin heavy chain sequences from D. melanogaster
(PIR C35815), rabbit (SP P04460), and human (PIR
S12458). Segment II of misato is a major contributor to
its greater length compared with the various tubulins.
The most significant sequence similarities to this
54-amino acid region are from a motif found in the
heavy chains of myosins from different organisms. A
comparison of segment II with the vertebrate myosin
heavy chains reveals that it is homologous to a myosin
peptide in the hinge region linking the S2 and LMM
domains. Segment II also contains heptad repeats which
are characteristic of the myosin tail alpha-helical
coiled-coils.
Length = 103
Score = 35.0 bits (81), Expect = 0.014
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 2 REIVHIQVGQCGNQTGVKFWEEISQEHGLNEMGRYEGTSDLQLERIQVYYNE--AQGG-- 57
REI+ +Q+GQ N G FW QE Y+ + L V + E Q G
Sbjct: 4 REIITLQLGQYANYVGTHFW--NQQESYFT----YDPDAPESLIDHDVLFREGLTQDGVE 57
Query: 58 -YIPRAILVDLE 68
Y PR +L DL+
Sbjct: 58 TYTPRLLLYDLK 69
>gnl|CDD|223284 COG0206, FtsZ, Cell division GTPase [Cell division and chromosome
partitioning].
Length = 338
Score = 36.1 bits (84), Expect = 0.035
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 134 VTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIE 193
VT +GGGTG+G ++ +I +E + A +P +E NA + L E
Sbjct: 101 VTAGMGGGTGTG-AAPVVAEIAKEL-GALTVAVVTLPFSFEGSPRME--NAEEGIEELRE 156
Query: 194 TSDETFCIDNEALYDI 209
D I N+ L
Sbjct: 157 VVDTLIVIPNDKLLKG 172
>gnl|CDD|237273 PRK13018, PRK13018, cell division protein FtsZ; Provisional.
Length = 378
Score = 30.7 bits (70), Expect = 1.6
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 134 VTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIE 193
VT +GGGTG+G ++ +E + VV P + A + L E
Sbjct: 118 VTAGMGGGTGTGAAPVVAEIAKE----QGALVVGVVTKPFKFEGRARMQKAEEGIERLRE 173
Query: 194 TSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCLRFPGQLNAD 248
+D IDN L DI V +L + ++ + +++ T+ GIT + P +N D
Sbjct: 174 AADTVIVIDNNRLLDI-VPNLPIAD-AFSVADEVIAETVKGITETITKPSLINLD 226
>gnl|CDD|193426 pfam12953, DUF3842, Domain of unknown function (DUF3842). This
short protein is found mainly in firmicute bacteria. It
is functionally uncharacterized.
Length = 131
Score = 28.6 bits (65), Expect = 3.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 141 GTGSGMGTLLLTKIREEYPDR 161
G G G+G ++ K+R+E P+R
Sbjct: 7 GQGGGIGKQIIEKLRKELPER 27
>gnl|CDD|99910 cd05568, PTS_IIB_bgl_like, PTS_IIB_bgl_like: the PTS
(phosphotransferase system) IIB domain of a family of
sensory systems composed of a membrane-bound
sugar-sensor (similar to BglF) and a transcription
antiterminator (similar to BglG) which regulate
expression of genes involved in sugar utilization. The
domain architecture of the IIB-containing protein
includes a region N-terminal to the IIB domain which is
homologous to the BglG transcription antiterminator with
an RNA-binding domain followed by two homologous
domains, PRD1 and PRD2 (PTS Regulation Domains).
C-terminal to the IIB domain is a domain similar to the
PTS IIA domain. In this system, the BglG-like region and
the IIB and IIA-like domains are all expressed together
as a single multidomain protein. The IIB domain fold
includes a central four-stranded parallel open twisted
beta-sheet flanked by alpha-helices on both sides. The
seven major PTS systems with this IIB fold include this
sensory system with similarity to the bacterial bgl
system, chitobiose/lichenan, ascorbate, lactose,
galactitol, mannitol, and fructose systems.
Length = 85
Score = 27.5 bits (62), Expect = 3.9
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 143 GSGMGT--LLLTKIREEYPDRM-INAFSVVPSPKVSDTVVEPYNAILSLSHLIETSDETF 199
SG+GT LL +K+++ +P+ I+ S+ ++ + ++ Y+ I+S L +T
Sbjct: 8 PSGIGTSRLLKSKLKKLFPEIEIIDVISLR---ELEEVDLDDYDLIISTVPLEDTDKPVI 64
Query: 200 CI 201
+
Sbjct: 65 VV 66
>gnl|CDD|222394 pfam13809, Tubulin_2, Tubulin like. Many of the residues conserved
in Tubulin, pfam00091, are also highly conserved in this
family.
Length = 345
Score = 28.8 bits (65), Expect = 5.6
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 104 HYTEGVELVDAVMDLTRREAENCDCMQG---FQVTHSLGGGTGSGM 146
+Y + ++ + T +E +G V SL GGTGSGM
Sbjct: 120 NYQAIRQAIETALKRTFLLSEGQKVGEGGVNVFVVGSLSGGTGSGM 165
>gnl|CDD|232805 TIGR00065, ftsZ, cell division protein FtsZ. This family consists
of cell division protein FtsZ, a GTPase found in
bacteria, the chloroplast of plants, and in
archaebacteria. Structurally similar to tubulin, FtsZ
undergoes GTP-dependent polymerization into filaments
that form a cytoskeleton involved in septum synthesis
[Cellular processes, Cell division].
Length = 349
Score = 28.8 bits (65), Expect = 5.7
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 134 VTHSLGGGTGSGMGTLLLTKIREEYPDRMINAFSVVPSPKVSDTVVEPYNAILSLSHLIE 193
+T +GGGTG+G ++ KI +E +VV P + + A L L +
Sbjct: 107 ITAGMGGGTGTG-AAPVVAKIAKE---LGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQ 162
Query: 194 TSDETFCIDNEALYDICVRSLKLNSPSYRDLNHLVSATMCGITTCLRFPGQLN---ADLR 250
D I N+ L ++ V +L LN +++ + ++ + GI+ + PG +N AD+R
Sbjct: 163 AVDTLIVIPNDKLLEV-VPNLPLND-AFKVADDVLVRAVKGISELITKPGLINIDFADVR 220
>gnl|CDD|130997 TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB
family of poly(A) polymerases (also known as plasmid
copy number protein). These enzymes sequentially add
adenosine nucleotides to the 3' end of RNAs, targeting
them for degradation by the cell. This was originally
described for anti-sense RNAs, but was later
demonstrated for mRNAs as well. Members of this family
are as yet limited to the gamma- and
beta-proteobacteria, with putative members in the
Chlamydiacae and spirochetes. This family has homology
to tRNA nucleotidyltransferase (cca).
Length = 410
Score = 29.0 bits (65), Expect = 5.9
Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 387 MFRRKAFLHWYTVEGMDEFEFHEAGANVEDLICEY-QQYQEASIEDTVEIATSDDEKGDH 445
M RK H D E ++ E+ YQ AS E+ E+ S +
Sbjct: 347 MRARKLLGHARFRAAYDLLLLREVCGRENAVLGEWWTPYQLASEEERTEMTRSAARHEGN 406
Query: 446 R 446
R
Sbjct: 407 R 407
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.136 0.413
Gapped
Lambda K H
0.267 0.0807 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 23,313,869
Number of extensions: 2263178
Number of successful extensions: 1796
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1737
Number of HSP's successfully gapped: 39
Length of query: 456
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 356
Effective length of database: 6,502,202
Effective search space: 2314783912
Effective search space used: 2314783912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (27.1 bits)