Query psy17300
Match_columns 152
No_of_seqs 135 out of 1103
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 18:28:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 6.7E-35 2.3E-39 255.7 9.1 149 1-151 207-365 (566)
2 3q9t_A Choline dehydrogenase a 100.0 2.4E-31 8.3E-36 233.6 11.9 137 12-150 216-359 (577)
3 3qvp_A Glucose oxidase; oxidor 100.0 4.6E-31 1.6E-35 232.2 12.5 114 1-116 226-341 (583)
4 1gpe_A Protein (glucose oxidas 99.9 1.8E-28 6E-33 215.3 5.7 138 1-140 230-372 (587)
5 2jbv_A Choline oxidase; alcoho 99.9 6E-25 2E-29 191.2 9.6 114 1-116 208-322 (546)
6 3t37_A Probable dehydrogenase; 99.9 3.4E-24 1.2E-28 183.3 8.7 111 1-115 209-320 (526)
7 1ju2_A HydroxynitrIle lyase; f 99.9 4.8E-24 1.6E-28 185.1 8.1 114 1-117 195-311 (536)
8 1kdg_A CDH, cellobiose dehydro 99.9 6.6E-23 2.3E-27 177.3 10.0 136 1-141 195-352 (546)
9 3pl8_A Pyranose 2-oxidase; sub 99.8 1.5E-20 5.1E-25 166.1 7.3 111 1-115 253-370 (623)
10 1n4w_A CHOD, cholesterol oxida 99.8 3E-19 1E-23 153.6 8.8 100 1-112 221-324 (504)
11 1coy_A Cholesterol oxidase; ox 99.7 2.1E-17 7E-22 142.4 8.0 95 1-106 226-324 (507)
12 4at0_A 3-ketosteroid-delta4-5a 97.8 6E-05 2E-09 64.3 7.7 57 13-71 213-270 (510)
13 1qo8_A Flavocytochrome C3 fuma 96.9 0.0022 7.4E-08 55.3 7.7 54 13-68 261-314 (566)
14 1y0p_A Fumarate reductase flav 96.9 0.003 1E-07 54.4 8.3 53 13-67 266-318 (571)
15 1d4d_A Flavocytochrome C fumar 96.9 0.0033 1.1E-07 54.4 8.2 57 13-71 266-323 (572)
16 2h88_A Succinate dehydrogenase 96.7 0.0066 2.3E-07 53.5 8.8 52 13-67 166-218 (621)
17 1kf6_A Fumarate reductase flav 96.6 0.0079 2.7E-07 52.6 8.4 55 11-68 144-199 (602)
18 2wdq_A Succinate dehydrogenase 96.4 0.0071 2.4E-07 52.7 7.4 52 14-67 155-207 (588)
19 1chu_A Protein (L-aspartate ox 96.4 0.0085 2.9E-07 51.6 7.4 55 11-67 148-209 (540)
20 2bs2_A Quinol-fumarate reducta 96.2 0.01 3.4E-07 52.7 7.3 51 14-67 170-221 (660)
21 2rgh_A Alpha-glycerophosphate 96.0 0.017 5.9E-07 50.0 7.5 59 14-76 200-259 (571)
22 3da1_A Glycerol-3-phosphate de 96.0 0.024 8.4E-07 48.9 8.3 60 14-77 182-242 (561)
23 3e1t_A Halogenase; flavoprotei 95.6 0.04 1.4E-06 46.6 8.2 61 7-70 116-176 (512)
24 4dgk_A Phytoene dehydrogenase; 95.6 0.014 4.6E-07 48.8 5.0 54 13-73 232-285 (501)
25 1jnr_A Adenylylsulfate reducta 95.6 0.023 7.8E-07 50.0 6.5 50 16-67 166-219 (643)
26 3dme_A Conserved exported prot 95.3 0.021 7.3E-07 44.9 5.1 59 13-77 161-220 (369)
27 1rp0_A ARA6, thiazole biosynth 95.2 0.1 3.5E-06 40.7 8.6 53 11-66 129-191 (284)
28 3gyx_A Adenylylsulfate reducta 95.1 0.023 8E-07 50.3 5.2 50 16-67 182-234 (662)
29 3dje_A Fructosyl amine: oxygen 95.0 0.032 1.1E-06 45.7 5.4 52 13-72 172-226 (438)
30 3atr_A Conserved archaeal prot 94.7 0.1 3.6E-06 43.2 7.9 53 14-69 112-165 (453)
31 3r9u_A Thioredoxin reductase; 94.6 0.13 4.4E-06 39.5 7.8 64 7-73 188-251 (315)
32 2i0z_A NAD(FAD)-utilizing dehy 94.6 0.089 3E-06 43.7 7.2 50 13-69 145-194 (447)
33 1fl2_A Alkyl hydroperoxide red 94.3 0.19 6.4E-06 38.8 8.0 59 11-72 189-248 (310)
34 3ab1_A Ferredoxin--NADP reduct 94.3 0.23 8E-06 39.3 8.7 61 13-76 213-273 (360)
35 3itj_A Thioredoxin reductase 1 94.2 0.16 5.4E-06 39.4 7.6 63 8-73 215-278 (338)
36 3f8d_A Thioredoxin reductase ( 94.2 0.31 1.1E-05 37.3 9.2 67 7-77 195-262 (323)
37 3ka7_A Oxidoreductase; structu 94.2 0.063 2.2E-06 43.5 5.2 51 14-72 208-258 (425)
38 3cty_A Thioredoxin reductase; 94.0 0.12 4.1E-06 40.2 6.4 60 14-76 202-262 (319)
39 3cgv_A Geranylgeranyl reductas 93.9 0.12 4.2E-06 41.1 6.4 50 13-66 113-162 (397)
40 1y56_B Sarcosine oxidase; dehy 93.7 0.081 2.8E-06 42.2 5.0 56 13-77 160-215 (382)
41 2qcu_A Aerobic glycerol-3-phos 93.2 0.21 7.2E-06 42.1 7.0 54 14-72 161-215 (501)
42 2q0l_A TRXR, thioredoxin reduc 93.1 0.56 1.9E-05 36.1 8.8 64 9-75 186-250 (311)
43 1trb_A Thioredoxin reductase; 92.9 0.39 1.3E-05 37.1 7.7 57 13-72 195-253 (320)
44 3axb_A Putative oxidoreductase 92.9 0.12 4E-06 42.5 4.8 57 13-76 192-263 (448)
45 3fg2_P Putative rubredoxin red 92.7 0.28 9.5E-06 39.9 6.8 64 7-77 189-252 (404)
46 2gag_B Heterotetrameric sarcos 92.5 0.15 5E-06 40.9 4.9 55 13-76 185-239 (405)
47 3nix_A Flavoprotein/dehydrogen 92.2 0.33 1.1E-05 39.2 6.6 49 14-66 118-166 (421)
48 3lxd_A FAD-dependent pyridine 92.2 0.31 1E-05 39.8 6.5 64 7-77 199-262 (415)
49 3jsk_A Cypbp37 protein; octame 91.7 0.65 2.2E-05 38.0 7.8 60 7-67 166-252 (344)
50 3nyc_A D-arginine dehydrogenas 91.3 0.26 8.9E-06 38.9 4.9 55 13-77 165-219 (381)
51 1hyu_A AHPF, alkyl hydroperoxi 91.2 0.75 2.6E-05 39.0 8.1 56 14-72 403-459 (521)
52 1vdc_A NTR, NADPH dependent th 91.1 0.94 3.2E-05 35.1 8.0 65 10-76 203-268 (333)
53 2q7v_A Thioredoxin reductase; 91.0 0.93 3.2E-05 35.1 7.9 61 9-73 195-256 (325)
54 2gmh_A Electron transfer flavo 91.0 0.39 1.3E-05 41.5 6.1 60 7-68 149-219 (584)
55 2zxi_A TRNA uridine 5-carboxym 90.9 0.27 9.1E-06 43.6 5.1 51 13-71 135-185 (637)
56 3s5w_A L-ornithine 5-monooxyge 90.9 0.5 1.7E-05 38.8 6.5 61 6-69 131-193 (463)
57 1mo9_A ORF3; nucleotide bindin 90.6 0.65 2.2E-05 39.3 7.1 67 7-76 260-327 (523)
58 3ps9_A TRNA 5-methylaminomethy 90.5 0.45 1.5E-05 41.6 6.2 53 14-75 429-481 (676)
59 2cul_A Glucose-inhibited divis 90.0 0.42 1.4E-05 35.9 4.9 57 7-71 73-130 (232)
60 2e5v_A L-aspartate oxidase; ar 89.7 0.25 8.5E-06 41.5 3.7 48 13-67 130-177 (472)
61 3i3l_A Alkylhalidase CMLS; fla 89.7 0.51 1.7E-05 41.0 5.8 53 8-64 134-186 (591)
62 3nlc_A Uncharacterized protein 89.6 0.17 5.7E-06 44.0 2.5 56 14-76 232-289 (549)
63 2gjc_A Thiazole biosynthetic e 89.5 1.6 5.6E-05 35.3 8.4 57 8-64 153-237 (326)
64 2oln_A NIKD protein; flavoprot 89.5 0.72 2.5E-05 36.9 6.2 52 14-75 165-216 (397)
65 3ces_A MNMG, tRNA uridine 5-ca 89.4 0.38 1.3E-05 42.7 4.8 49 15-71 138-186 (651)
66 3oz2_A Digeranylgeranylglycero 89.3 0.84 2.9E-05 35.8 6.4 57 7-68 107-163 (397)
67 3v76_A Flavoprotein; structura 89.2 0.67 2.3E-05 38.4 5.9 48 13-69 143-190 (417)
68 1pj5_A N,N-dimethylglycine oxi 89.0 0.69 2.4E-05 41.5 6.2 55 13-76 162-216 (830)
69 1ryi_A Glycine oxidase; flavop 88.8 0.43 1.5E-05 37.8 4.4 54 13-76 175-228 (382)
70 3lzw_A Ferredoxin--NADP reduct 88.8 1.2 3.9E-05 34.3 6.7 61 13-77 200-261 (332)
71 2xve_A Flavin-containing monoo 88.7 0.67 2.3E-05 38.7 5.6 68 7-76 106-176 (464)
72 2zbw_A Thioredoxin reductase; 88.4 2 6.9E-05 33.2 8.0 65 8-76 197-262 (335)
73 4a9w_A Monooxygenase; baeyer-v 88.1 0.36 1.2E-05 37.5 3.4 62 6-75 80-141 (357)
74 3nrn_A Uncharacterized protein 87.8 0.62 2.1E-05 37.8 4.8 50 13-72 200-249 (421)
75 4b63_A L-ornithine N5 monooxyg 87.3 1.1 3.9E-05 37.8 6.3 63 5-70 148-216 (501)
76 3s5w_A L-ornithine 5-monooxyge 87.1 2.9 0.0001 34.1 8.6 50 14-67 328-378 (463)
77 2bry_A NEDD9 interacting prote 87.0 0.24 8.3E-06 41.9 1.9 62 8-70 172-234 (497)
78 3iwa_A FAD-dependent pyridine 86.7 1.5 5.1E-05 36.3 6.6 62 7-76 207-268 (472)
79 3pvc_A TRNA 5-methylaminomethy 86.5 0.84 2.9E-05 40.0 5.2 54 14-75 424-477 (689)
80 3p1w_A Rabgdi protein; GDI RAB 85.9 0.85 2.9E-05 38.9 4.7 47 13-65 267-313 (475)
81 3ic9_A Dihydrolipoamide dehydr 85.4 3.5 0.00012 34.4 8.3 59 13-76 226-286 (492)
82 2qa1_A PGAE, polyketide oxygen 85.1 2.5 8.6E-05 35.6 7.3 54 14-72 118-171 (500)
83 2gf3_A MSOX, monomeric sarcosi 84.8 1.3 4.6E-05 34.9 5.2 53 13-75 161-213 (389)
84 2qae_A Lipoamide, dihydrolipoy 84.2 2.7 9.2E-05 34.7 7.0 66 7-76 220-288 (468)
85 2qa2_A CABE, polyketide oxygen 84.0 2.9 0.0001 35.2 7.2 54 14-72 119-172 (499)
86 2uzz_A N-methyl-L-tryptophan o 83.7 1.7 5.7E-05 34.2 5.3 49 13-71 160-208 (372)
87 3hyw_A Sulfide-quinone reducta 83.4 2.8 9.7E-05 34.3 6.7 62 6-76 204-265 (430)
88 3urh_A Dihydrolipoyl dehydroge 83.1 4 0.00014 33.9 7.7 65 8-76 245-312 (491)
89 2gv8_A Monooxygenase; FMO, FAD 83.0 3 0.0001 34.2 6.7 65 6-74 119-185 (447)
90 3cp8_A TRNA uridine 5-carboxym 83.0 2.6 8.8E-05 37.3 6.6 49 13-69 129-177 (641)
91 1q1r_A Putidaredoxin reductase 83.0 1.6 5.5E-05 35.9 5.1 65 8-77 197-261 (431)
92 3ihg_A RDME; flavoenzyme, anth 82.7 3.2 0.00011 34.9 6.9 50 14-66 132-183 (535)
93 3lad_A Dihydrolipoamide dehydr 82.5 2.8 9.5E-05 34.6 6.4 59 8-71 227-285 (476)
94 2x3n_A Probable FAD-dependent 82.2 2.7 9.1E-05 33.6 6.0 49 14-69 120-169 (399)
95 2gqf_A Hypothetical protein HI 81.7 2.5 8.4E-05 34.6 5.7 50 13-69 120-171 (401)
96 3dgh_A TRXR-1, thioredoxin red 81.2 3.9 0.00013 33.9 6.8 62 7-71 232-294 (483)
97 3gwf_A Cyclohexanone monooxyge 81.1 1.3 4.3E-05 38.0 3.8 65 6-76 91-157 (540)
98 2v3a_A Rubredoxin reductase; a 81.0 5.5 0.00019 31.8 7.5 63 7-77 192-254 (384)
99 3ef6_A Toluene 1,2-dioxygenase 81.0 1.3 4.5E-05 36.0 3.8 63 7-77 190-252 (410)
100 2ywl_A Thioredoxin reductase r 80.6 2.8 9.5E-05 29.5 5.1 58 7-76 61-118 (180)
101 1m6i_A Programmed cell death p 80.4 3.9 0.00013 34.3 6.6 61 8-76 232-292 (493)
102 2eq6_A Pyruvate dehydrogenase 80.0 5.6 0.00019 32.9 7.4 60 7-70 215-275 (464)
103 2dkh_A 3-hydroxybenzoate hydro 79.1 3.8 0.00013 35.6 6.3 61 11-72 151-217 (639)
104 1v59_A Dihydrolipoamide dehydr 78.7 6.2 0.00021 32.5 7.3 68 7-76 229-299 (478)
105 4ap3_A Steroid monooxygenase; 77.9 1.4 4.9E-05 37.7 3.2 65 6-76 103-169 (549)
106 3dgz_A Thioredoxin reductase 2 76.8 6.9 0.00024 32.5 7.1 62 7-71 230-292 (488)
107 1k0i_A P-hydroxybenzoate hydro 76.5 4.1 0.00014 32.3 5.4 54 14-71 115-168 (394)
108 2a87_A TRXR, TR, thioredoxin r 76.1 2.9 9.9E-05 32.5 4.3 58 11-72 200-258 (335)
109 3d1c_A Flavin-containing putat 75.6 3.5 0.00012 32.2 4.7 54 7-69 93-146 (369)
110 2hqm_A GR, grase, glutathione 75.4 3.2 0.00011 34.5 4.6 64 8-76 232-296 (479)
111 2bcg_G Secretory pathway GDP d 75.4 4.1 0.00014 33.6 5.2 46 14-65 254-299 (453)
112 3c4n_A Uncharacterized protein 75.3 1.4 4.7E-05 35.8 2.3 55 13-77 183-247 (405)
113 1vg0_A RAB proteins geranylger 75.3 5.2 0.00018 35.4 6.1 48 11-63 387-434 (650)
114 1zmd_A Dihydrolipoyl dehydroge 74.9 6.6 0.00023 32.3 6.4 67 7-76 225-294 (474)
115 1dxl_A Dihydrolipoamide dehydr 74.5 4.2 0.00014 33.4 5.1 61 7-71 223-284 (470)
116 3uox_A Otemo; baeyer-villiger 74.3 1.9 6.4E-05 37.0 3.0 65 6-76 91-157 (545)
117 2weu_A Tryptophan 5-halogenase 74.2 4.7 0.00016 33.5 5.4 46 14-66 185-230 (511)
118 3h28_A Sulfide-quinone reducta 73.7 7.9 0.00027 31.4 6.5 63 6-76 204-267 (430)
119 2vvm_A Monoamine oxidase N; FA 73.4 6.9 0.00023 32.2 6.1 49 14-70 268-316 (495)
120 3dk9_A Grase, GR, glutathione 73.1 12 0.0004 30.8 7.5 68 7-76 233-305 (478)
121 4dna_A Probable glutathione re 72.7 3.3 0.00011 34.1 4.0 62 8-76 217-280 (463)
122 2a8x_A Dihydrolipoyl dehydroge 72.0 8.3 0.00029 31.6 6.3 64 8-76 218-283 (464)
123 2cdu_A NADPH oxidase; flavoenz 71.3 6.3 0.00022 32.3 5.4 58 7-72 196-253 (452)
124 1ebd_A E3BD, dihydrolipoamide 71.1 10 0.00036 30.9 6.7 59 8-71 217-275 (455)
125 1xdi_A RV3303C-LPDA; reductase 70.9 6.9 0.00024 32.6 5.6 56 7-70 228-283 (499)
126 3k7m_X 6-hydroxy-L-nicotine ox 70.7 5 0.00017 32.2 4.6 48 8-64 210-257 (431)
127 3oc4_A Oxidoreductase, pyridin 70.4 7.8 0.00027 31.7 5.8 56 7-71 194-249 (452)
128 1d5t_A Guanine nucleotide diss 70.4 3.7 0.00013 33.7 3.8 44 14-65 246-289 (433)
129 1sez_A Protoporphyrinogen oxid 69.5 2.1 7E-05 35.4 2.0 54 17-71 256-313 (504)
130 1w4x_A Phenylacetone monooxyge 69.2 4.5 0.00015 34.2 4.1 54 17-76 111-164 (542)
131 2r0c_A REBC; flavin adenine di 69.1 15 0.0005 31.1 7.3 50 19-72 152-202 (549)
132 2wpf_A Trypanothione reductase 68.8 7.8 0.00027 32.4 5.5 62 8-76 241-304 (495)
133 3fmw_A Oxygenase; mithramycin, 68.8 3.9 0.00013 35.2 3.7 51 14-69 160-210 (570)
134 1yvv_A Amine oxidase, flavin-c 68.1 6.8 0.00023 30.0 4.7 49 16-71 119-167 (336)
135 2e4g_A Tryptophan halogenase; 67.7 5.1 0.00018 33.9 4.2 45 15-66 208-252 (550)
136 1fec_A Trypanothione reductase 67.5 6.7 0.00023 32.7 4.9 62 8-76 237-300 (490)
137 2pyx_A Tryptophan halogenase; 67.2 8.2 0.00028 32.4 5.3 44 15-65 189-232 (526)
138 3lzw_A Ferredoxin--NADP reduct 67.1 9.6 0.00033 28.9 5.4 59 6-72 71-130 (332)
139 3qj4_A Renalase; FAD/NAD(P)-bi 66.7 3.4 0.00012 32.2 2.7 48 16-71 123-170 (342)
140 2aqj_A Tryptophan halogenase, 66.2 7.4 0.00025 32.7 4.9 47 14-67 177-223 (538)
141 2zbw_A Thioredoxin reductase; 66.2 17 0.00059 27.7 6.7 60 8-75 71-131 (335)
142 1ojt_A Surface protein; redox- 66.0 14 0.00047 30.6 6.4 64 7-76 231-298 (482)
143 3l8k_A Dihydrolipoyl dehydroge 65.7 11 0.00037 31.1 5.7 57 17-76 226-283 (466)
144 3cgb_A Pyridine nucleotide-dis 65.3 14 0.00049 30.5 6.4 60 8-76 233-292 (480)
145 1fl2_A Alkyl hydroperoxide red 65.2 11 0.00039 28.4 5.4 54 7-65 61-114 (310)
146 3nks_A Protoporphyrinogen oxid 65.1 3.1 0.00011 33.9 2.2 50 14-71 246-295 (477)
147 2gqw_A Ferredoxin reductase; f 64.4 7.2 0.00025 31.6 4.4 59 7-77 192-250 (408)
148 3o0h_A Glutathione reductase; 63.1 7 0.00024 32.4 4.1 58 11-76 241-300 (484)
149 2jae_A L-amino acid oxidase; o 62.9 21 0.00073 29.1 7.0 43 17-64 252-294 (489)
150 2r9z_A Glutathione amide reduc 62.5 18 0.00063 29.7 6.6 55 8-69 213-267 (463)
151 1onf_A GR, grase, glutathione 62.3 12 0.00041 31.2 5.4 64 7-76 222-287 (500)
152 3h8l_A NADH oxidase; membrane 62.0 12 0.00043 29.8 5.3 56 8-72 62-117 (409)
153 2b9w_A Putative aminooxidase; 61.2 3.2 0.00011 33.4 1.6 41 17-66 218-258 (424)
154 3ab1_A Ferredoxin--NADP reduct 61.1 22 0.00077 27.5 6.6 61 8-75 80-141 (360)
155 4g6h_A Rotenone-insensitive NA 60.5 12 0.00042 31.4 5.2 58 7-70 277-336 (502)
156 3ntd_A FAD-dependent pyridine 60.4 21 0.00071 29.9 6.6 64 7-76 197-277 (565)
157 1ges_A Glutathione reductase; 58.9 9 0.00031 31.4 4.0 63 7-76 213-277 (450)
158 2yqu_A 2-oxoglutarate dehydrog 58.0 22 0.00074 29.0 6.2 51 12-70 218-268 (455)
159 2ivd_A PPO, PPOX, protoporphyr 57.3 4 0.00014 33.3 1.6 49 17-71 250-299 (478)
160 3ntd_A FAD-dependent pyridine 56.8 5.8 0.0002 33.3 2.6 56 13-76 69-125 (565)
161 1gte_A Dihydropyrimidine dehyd 56.4 31 0.0011 31.7 7.5 60 14-76 382-454 (1025)
162 3ics_A Coenzyme A-disulfide re 55.2 16 0.00053 31.0 5.0 60 8-77 234-293 (588)
163 2iid_A L-amino-acid oxidase; f 55.2 25 0.00084 28.8 6.1 44 18-65 254-297 (498)
164 3k30_A Histamine dehydrogenase 54.8 22 0.00077 30.9 6.1 55 10-72 575-630 (690)
165 3cgb_A Pyridine nucleotide-dis 53.9 31 0.0011 28.4 6.6 51 13-71 104-155 (480)
166 3qfa_A Thioredoxin reductase 1 53.6 27 0.00091 29.3 6.1 62 8-70 256-319 (519)
167 3i6d_A Protoporphyrinogen oxid 53.6 16 0.00054 29.3 4.6 47 17-71 248-294 (470)
168 3lov_A Protoporphyrinogen oxid 53.3 9.9 0.00034 31.0 3.3 47 17-72 249-295 (475)
169 1b37_A Protein (polyamine oxid 51.5 25 0.00085 28.7 5.6 41 16-64 228-268 (472)
170 2gag_A Heterotetrameric sarcos 51.2 31 0.0011 31.6 6.6 60 14-75 328-392 (965)
171 3klj_A NAD(FAD)-dependent dehy 51.2 8.6 0.00029 31.1 2.6 51 13-75 73-123 (385)
172 2q0l_A TRXR, thioredoxin reduc 50.8 51 0.0017 24.7 6.9 49 7-64 64-112 (311)
173 3ics_A Coenzyme A-disulfide re 50.2 17 0.00059 30.7 4.5 61 8-76 99-160 (588)
174 3f8d_A Thioredoxin reductase ( 48.4 37 0.0013 25.4 5.7 58 7-75 75-132 (323)
175 1nhp_A NADH peroxidase; oxidor 47.9 25 0.00085 28.6 5.0 50 14-71 68-118 (447)
176 3sx6_A Sulfide-quinone reducta 47.5 72 0.0025 25.7 7.7 62 7-76 213-279 (437)
177 3rp8_A Flavoprotein monooxygen 46.4 61 0.0021 25.6 7.0 48 17-72 140-187 (407)
178 1hyu_A AHPF, alkyl hydroperoxi 46.2 30 0.001 29.0 5.3 54 7-65 272-325 (521)
179 1ps9_A 2,4-dienoyl-COA reducta 46.1 25 0.00084 30.5 4.9 52 11-71 582-633 (671)
180 2z3y_A Lysine-specific histone 46.1 75 0.0026 27.5 8.0 44 16-63 410-455 (662)
181 3c96_A Flavin-containing monoo 45.8 53 0.0018 26.1 6.6 54 15-73 122-176 (410)
182 2x8g_A Thioredoxin glutathione 45.6 83 0.0028 26.5 8.1 62 8-71 332-400 (598)
183 2yg5_A Putrescine oxidase; oxi 45.6 24 0.00082 28.4 4.5 48 16-71 226-273 (453)
184 1lvl_A Dihydrolipoamide dehydr 45.5 23 0.0008 29.0 4.5 55 8-70 218-272 (458)
185 1xhc_A NADH oxidase /nitrite r 45.5 15 0.00052 29.3 3.2 58 7-77 188-245 (367)
186 3iwa_A FAD-dependent pyridine 44.4 26 0.0009 28.6 4.6 51 13-71 77-128 (472)
187 2xag_A Lysine-specific histone 43.7 67 0.0023 29.1 7.5 43 16-62 581-625 (852)
188 1s3e_A Amine oxidase [flavin-c 43.4 13 0.00046 30.7 2.7 48 16-71 226-273 (520)
189 2bc0_A NADH oxidase; flavoprot 42.8 31 0.0011 28.5 4.8 57 7-72 241-297 (490)
190 2vou_A 2,6-dihydroxypyridine h 41.2 47 0.0016 26.2 5.6 51 15-73 110-160 (397)
191 1cjc_A Protein (adrenodoxin re 41.0 42 0.0014 27.7 5.4 52 15-68 270-335 (460)
192 1nhp_A NADH peroxidase; oxidor 37.4 41 0.0014 27.2 4.7 57 7-72 196-252 (447)
193 1zk7_A HGII, reductase, mercur 37.2 48 0.0016 27.0 5.1 54 8-70 222-275 (467)
194 3itj_A Thioredoxin reductase 1 35.9 36 0.0012 25.7 3.9 51 7-64 89-140 (338)
195 4a5l_A Thioredoxin reductase; 35.6 1.3E+02 0.0046 22.2 8.2 58 12-72 198-256 (314)
196 2vdc_G Glutamate synthase [NAD 34.7 15 0.00052 30.5 1.7 59 14-76 314-390 (456)
197 1y56_A Hypothetical protein PH 34.5 32 0.0011 28.5 3.7 55 14-76 269-323 (493)
198 1rsg_A FMS1 protein; FAD bindi 34.3 43 0.0015 27.7 4.4 40 17-63 215-254 (516)
199 3oc4_A Oxidoreductase, pyridin 33.9 48 0.0016 26.9 4.6 55 13-76 69-123 (452)
200 3alj_A 2-methyl-3-hydroxypyrid 33.5 58 0.002 25.5 4.9 48 14-72 119-166 (379)
201 3kd9_A Coenzyme A disulfide re 33.5 59 0.002 26.3 5.1 60 7-76 195-254 (449)
202 3kd9_A Coenzyme A disulfide re 31.9 82 0.0028 25.4 5.7 49 13-72 70-118 (449)
203 3l8k_A Dihydrolipoyl dehydroge 31.4 1.1E+02 0.0038 24.8 6.5 54 7-71 94-147 (466)
204 4eqs_A Coenzyme A disulfide re 31.0 52 0.0018 26.7 4.3 52 13-71 68-119 (437)
205 3uox_A Otemo; baeyer-villiger 30.4 61 0.0021 27.4 4.8 49 6-68 343-393 (545)
206 1pn0_A Phenol 2-monooxygenase; 30.1 74 0.0025 27.6 5.4 17 16-32 136-152 (665)
207 2cdu_A NADPH oxidase; flavoenz 29.9 75 0.0026 25.7 5.1 54 14-75 70-124 (452)
208 1y56_A Hypothetical protein PH 29.6 73 0.0025 26.3 5.1 48 14-66 172-219 (493)
209 1lqt_A FPRA; NADP+ derivative, 29.5 52 0.0018 27.1 4.1 50 15-68 265-328 (456)
210 3fbs_A Oxidoreductase; structu 28.5 39 0.0013 24.9 2.9 56 10-77 182-237 (297)
211 3d1c_A Flavin-containing putat 28.1 1.1E+02 0.0038 23.3 5.7 62 8-76 220-282 (369)
212 3gwf_A Cyclohexanone monooxyge 27.6 53 0.0018 27.8 3.9 56 6-74 335-392 (540)
213 3h8l_A NADH oxidase; membrane 27.3 48 0.0017 26.3 3.4 52 10-74 226-277 (409)
214 4gut_A Lysine-specific histone 27.1 84 0.0029 28.1 5.2 40 15-62 542-581 (776)
215 3sqn_A Conserved domain protei 26.1 18 0.00063 30.4 0.7 17 56-72 400-416 (485)
216 4fk1_A Putative thioredoxin re 24.0 45 0.0015 25.2 2.6 57 12-76 190-246 (304)
217 4eqs_A Coenzyme A disulfide re 23.0 64 0.0022 26.2 3.4 59 7-77 193-251 (437)
218 2xdo_A TETX2 protein; tetracyc 22.9 88 0.003 24.6 4.2 47 17-71 141-187 (398)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=6.7e-35 Score=255.70 Aligned_cols=149 Identities=29% Similarity=0.379 Sum_probs=129.3
Q ss_pred CcchhhhHHhhhcCCCcEEEcCcEEEEEEEeC--CC-CeEEEEEEEcCCC-cEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 1 MIASSIFLRAIKDKNTVQVSKNSEVTKLCFDE--TK-TKVTGVEFRNPQG-KTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 1 ~Ss~~~~l~~~~~~~nl~l~~~~~V~ri~~~~--~~-~~~~gV~~~~~~g-~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
+|++.+||.|+.+++|++|++++.|+||+|++ ++ ++|+||+|.+.+| +.++++|+||||||||+|+||||||+|||
T Consensus 207 ~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGI 286 (566)
T 3fim_B 207 SSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGI 286 (566)
T ss_dssp CCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred cCHHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCC
Confidence 57889999999899999999999999999981 13 6899999996556 78899999999999999999999999999
Q ss_pred CChhhhhhcCCCcccCCcccccccccCcCcceEEEEEeCCCC------CchhhHHHHHHHHhcCCCccccccccccCccc
Q psy17300 77 GDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTPV------SSYTINEIIYEYLTQRTGKRRRKFTRKRGGRL 150 (152)
Q Consensus 77 g~~~~l~~~gi~~~~~lp~VG~nl~dh~~~~~~~~~~~~~~~------~~~~~~~~~~~y~~~~~G~l~~~~~~~~~~~~ 150 (152)
||+++|+++||++++|||+||+|||||+.+ .+.|.++...+ +......++.+|+..++||++.... +.++|+
T Consensus 287 Gp~~~L~~~gI~vv~dlPgVG~NLqDH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~-~~~~f~ 364 (566)
T 3fim_B 287 GDENDLSSVGIDTIVNNPSVGRNLSDHLLL-PAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIA-NHLAWL 364 (566)
T ss_dssp ECHHHHHHTTCCCSEECTTTTCSBBCCEEE-CCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCSC-SEEEEE
T ss_pred CChHHHhhcCCCceecCcchhhhhhcCccc-eEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccChh-hheeee
Confidence 999999999999999999999999999999 89998876543 1233456789999999999998774 455665
Q ss_pred c
Q psy17300 151 E 151 (152)
Q Consensus 151 ~ 151 (152)
+
T Consensus 365 ~ 365 (566)
T 3fim_B 365 R 365 (566)
T ss_dssp C
T ss_pred c
Confidence 3
No 2
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.97 E-value=2.4e-31 Score=233.58 Aligned_cols=137 Identities=20% Similarity=0.299 Sum_probs=120.7
Q ss_pred hcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCCChhhhhhcCCCccc
Q psy17300 12 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGDAALLSKYNIPLVK 91 (152)
Q Consensus 12 ~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig~~~~l~~~gi~~~~ 91 (152)
..++|++|++++.|+||++++++++++||++.+.+|+.++++|+|+||||||+|+||+|||+|||||+++|+++||++++
T Consensus 216 ~~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~ 295 (577)
T 3q9t_A 216 KNKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIV 295 (577)
T ss_dssp SSCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSE
T ss_pred hcCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeec
Confidence 57899999999999999999656899999999656888999999999999999999999999999999999999999999
Q ss_pred CCcccccccccCcCcceEEEEEeCCCC-------CchhhHHHHHHHHhcCCCccccccccccCccc
Q psy17300 92 NLPGVGKRLSLHPMFFGLSYTFTKTPV-------SSYTINEIIYEYLTQRTGKRRRKFTRKRGGRL 150 (152)
Q Consensus 92 ~lp~VG~nl~dh~~~~~~~~~~~~~~~-------~~~~~~~~~~~y~~~~~G~l~~~~~~~~~~~~ 150 (152)
|||+||+|||||+.. .+.++++.... +......++.+|+..++||++.... +.+||.
T Consensus 296 dlP~VG~nl~DH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~~~~-~~~~~~ 359 (577)
T 3q9t_A 296 DSRHVGQNLMDHPGV-PFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGSGLL-ELVGFP 359 (577)
T ss_dssp ECTTTTEEEBCCEEE-EEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGCCSE-EEEEEC
T ss_pred cCchhhhhhhcCcce-eEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcccchh-heeEEe
Confidence 999999999999999 99999987553 2234667899999999999996553 555554
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.97 E-value=4.6e-31 Score=232.18 Aligned_cols=114 Identities=31% Similarity=0.372 Sum_probs=106.3
Q ss_pred CcchhhhHHhhhcCCCcEEEcCcEEEEEEEeCC--CCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCCC
Q psy17300 1 MIASSIFLRAIKDKNTVQVSKNSEVTKLCFDET--KTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGD 78 (152)
Q Consensus 1 ~Ss~~~~l~~~~~~~nl~l~~~~~V~ri~~~~~--~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig~ 78 (152)
||++.+||.|+.+++|++|++++.|+||+++++ +++|+||+|.+.+|+.++++|+||||||||+|+||||||+|||||
T Consensus 226 ~saa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp 305 (583)
T 3qvp_A 226 SDAAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGM 305 (583)
T ss_dssp CCHHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSC
T ss_pred ecHHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCC
Confidence 578899999998999999999999999999852 579999999966788899999999999999999999999999999
Q ss_pred hhhhhhcCCCcccCCcccccccccCcCcceEEEEEeCC
Q psy17300 79 AALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKT 116 (152)
Q Consensus 79 ~~~l~~~gi~~~~~lp~VG~nl~dh~~~~~~~~~~~~~ 116 (152)
+++|+++||++++||| ||+|||||+.. .+.++++..
T Consensus 306 ~~~L~~~GI~vv~dLP-VG~NLqDH~~~-~~~~~~~~~ 341 (583)
T 3qvp_A 306 KSILEPLGIDTVVDLP-VGLNLQDQTTA-TVRSRITSA 341 (583)
T ss_dssp HHHHGGGTCCCSBCCC-TTCCBBCCEEE-EEEEEECGG
T ss_pred HHHHHhCCCCceeeCc-cccchhhCccc-eEEEEecCC
Confidence 9999999999999999 99999999999 999988753
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=99.95 E-value=1.8e-28 Score=215.26 Aligned_cols=138 Identities=22% Similarity=0.280 Sum_probs=116.7
Q ss_pred CcchhhhHHhhhcCCCcEEEcCcEEEEEEEeCCC--CeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCCC
Q psy17300 1 MIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETK--TKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGD 78 (152)
Q Consensus 1 ~Ss~~~~l~~~~~~~nl~l~~~~~V~ri~~~~~~--~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig~ 78 (152)
||++.+||.++..++|++|++++.|+||++++++ ++|+||++.+.+|+.++++|+|+||||||+|+||+||++|||||
T Consensus 230 ~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp 309 (587)
T 1gpe_A 230 VDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGL 309 (587)
T ss_dssp CCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEEC
T ss_pred cCHHHHHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCC
Confidence 6788899988888999999999999999998522 58999999866788889999899999999999999999999999
Q ss_pred hhhhhhcCCCcccCCcccccccccCcCcceEEEEEeCCCC--C-chhhHHHHHHHHhcCCCcccc
Q psy17300 79 AALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTPV--S-SYTINEIIYEYLTQRTGKRRR 140 (152)
Q Consensus 79 ~~~l~~~gi~~~~~lp~VG~nl~dh~~~~~~~~~~~~~~~--~-~~~~~~~~~~y~~~~~G~l~~ 140 (152)
+++|+++||++++||| ||+|||||+.. .+.+.+++... . .......+.+|...++||++.
T Consensus 310 ~~~L~~~gI~vv~dlP-VG~nL~DH~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 372 (587)
T 1gpe_A 310 KSVLDQANVTQLLDLP-VGINMQDQTTT-TVSSRASSAGAGQGQAVFFANFTETFGDYAPQARDL 372 (587)
T ss_dssp HHHHHHTTCCCSEECC-TTCSBBCCEEE-EEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHH
T ss_pred HHHHHhCCCCeEEeCC-CCcchhcCccc-ceEEEeCCCcccccchHHHHHHHHHHHhCCCCCccc
Confidence 9999999999999999 99999999999 89988875432 1 111222456777767777654
No 5
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=99.91 E-value=6e-25 Score=191.19 Aligned_cols=114 Identities=27% Similarity=0.466 Sum_probs=103.5
Q ss_pred CcchhhhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCcEEEEEeCcEEEEccCCccChHHHhhCCCCCh
Q psy17300 1 MIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRILQQSGVGDA 79 (152)
Q Consensus 1 ~Ss~~~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig~~ 79 (152)
||++.+||.++.+++|++|++++.|++|+++. +++++||++.+. +|+.++++|+|+||||||+++||+||++|||||.
T Consensus 208 ~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~-~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~ 286 (546)
T 2jbv_A 208 SSSSVSYIHPIVEQENFTLLTGLRARQLVFDA-DRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPA 286 (546)
T ss_dssp CCHHHHHTGGGTTCTTEEEECSCEEEEEEECT-TSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECH
T ss_pred cCHHHHHHHHHhcCCCcEEEeCCEEEEEEECC-CCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCch
Confidence 57888999998888999999999999999983 279999999853 2778889997799999999999999999999999
Q ss_pred hhhhhcCCCcccCCcccccccccCcCcceEEEEEeCC
Q psy17300 80 ALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKT 116 (152)
Q Consensus 80 ~~l~~~gi~~~~~lp~VG~nl~dh~~~~~~~~~~~~~ 116 (152)
++|+++||++++|||+||+|||||+.. .+.+.++.+
T Consensus 287 ~~L~~~gi~~~~dlP~VG~nL~dH~~~-~~~~~~~~~ 322 (546)
T 2jbv_A 287 AHLAEHGIEVLVDSPGVGEHLQDHPEG-VVQFEAKQP 322 (546)
T ss_dssp HHHHHTTCCCSEECTTTTCSBBCCEEC-CEEEEESSC
T ss_pred HHHHhcCCceEeeCcchhhhhhhCccc-eEEEEecCC
Confidence 999999999999999999999999999 888887654
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=99.90 E-value=3.4e-24 Score=183.31 Aligned_cols=111 Identities=23% Similarity=0.404 Sum_probs=95.4
Q ss_pred CcchhhhHHh-hhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCCCh
Q psy17300 1 MIASSIFLRA-IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVGDA 79 (152)
Q Consensus 1 ~Ss~~~~l~~-~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig~~ 79 (152)
+|++.+|+.+ +..++|++|++++.|+||+++ +++++||++.+ +++...+.| |+||||||+|+||+|||+||||+.
T Consensus 209 ~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~--~~~a~gv~~~~-~~~~~~~~a-~~VILsAGai~SP~LLl~SGig~~ 284 (526)
T 3t37_A 209 VTAADAWLTKAVRGRKNLTILTGSRVRRLKLE--GNQVRSLEVVG-RQGSAEVFA-DQIVLCAGALESPALLMRSGIGPH 284 (526)
T ss_dssp CCHHHHHSCHHHHTCTTEEEECSCEEEEEEEE--TTEEEEEEEEE-TTEEEEEEE-EEEEECSHHHHHHHHHHHTTEECH
T ss_pred cccccccccccccCCCCeEEEeCCEEEEEEec--CCeEEEEEEEe-cCceEEEee-cceEEcccccCCcchhhhccCCch
Confidence 4667777755 567999999999999999999 78999999984 456677888 899999999999999999999999
Q ss_pred hhhhhcCCCcccCCcccccccccCcCcceEEEEEeC
Q psy17300 80 ALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTK 115 (152)
Q Consensus 80 ~~l~~~gi~~~~~lp~VG~nl~dh~~~~~~~~~~~~ 115 (152)
++++++||+++.|||+||+|||||+......+...+
T Consensus 285 ~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~ 320 (526)
T 3t37_A 285 DVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARK 320 (526)
T ss_dssp HHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESS
T ss_pred hhhhccCCCeEecCCccccccccccccceeEEeccC
Confidence 999999999999999999999999876233334333
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.90 E-value=4.8e-24 Score=185.13 Aligned_cols=114 Identities=28% Similarity=0.396 Sum_probs=97.6
Q ss_pred CcchhhhHHhhhcCCCcEEEcCcEEEEEEEeCC-CCeEEEEEEEcCCCcEEEEE--eCcEEEEccCCccChHHHhhCCCC
Q psy17300 1 MIASSIFLRAIKDKNTVQVSKNSEVTKLCFDET-KTKVTGVEFRNPQGKTIKVN--ANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 1 ~Ss~~~~l~~~~~~~nl~l~~~~~V~ri~~~~~-~~~~~gV~~~~~~g~~~~~~--a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
||++. |++.+ .++|++|++++.|+||+++.+ +++++||++.+.+|+.++++ ++|+||||||+|+||+||++||||
T Consensus 195 ~s~~~-~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig 272 (536)
T 1ju2_A 195 HAADE-LLNKG-NSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVG 272 (536)
T ss_dssp CCGGG-GGGGS-CTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEE
T ss_pred ecHHH-hhhhh-cCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCC
Confidence 34544 66554 689999999999999999852 25999999996567766664 668999999999999999999999
Q ss_pred ChhhhhhcCCCcccCCcccccccccCcCcceEEEEEeCCC
Q psy17300 78 DAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTKTP 117 (152)
Q Consensus 78 ~~~~l~~~gi~~~~~lp~VG~nl~dh~~~~~~~~~~~~~~ 117 (152)
|.++|+++||++++|||+||+|||||+.. .+.+.++.+.
T Consensus 273 ~~~~l~~~gi~~~~dlP~VG~NL~DH~~~-~~~~~~~~~~ 311 (536)
T 1ju2_A 273 PESYLSSLNIPVVLSHPYVGQFLHDNPRN-FINILPPNPI 311 (536)
T ss_dssp CHHHHHHTTCCCSEECTTTTEEEECCEEE-EEEECCSSCC
T ss_pred CHHHHHhcCCceEecCcccccchhcCcce-eEEEEeCCCc
Confidence 99999999999999999999999999988 8887776543
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.88 E-value=6.6e-23 Score=177.33 Aligned_cols=136 Identities=24% Similarity=0.355 Sum_probs=110.5
Q ss_pred CcchhhhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCc--EEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 1 MIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGK--TIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 1 ~Ss~~~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~--~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
+|++.+|+.++.+++|++|++++.|++|+++ +++++||++.+. +|+ +..+.+.++||||||+++||+||++||||
T Consensus 195 ~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~--~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 195 AGPVATYLQTALARPNFTFKTNVMVSNVVRN--GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp CHHHHTHHHHHHTCTTEEEECSCCEEEEEEE--TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred cCHHHHHHHHHhhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 4567789999988899999999999999998 679999999853 454 34565668999999999999999999999
Q ss_pred Chhhhhhc------CCCcc-----cCCcccccccccCcCcceEEEEEeCCC-C--C-----chhhHHHHHHHHhcCCCcc
Q psy17300 78 DAALLSKY------NIPLV-----KNLPGVGKRLSLHPMFFGLSYTFTKTP-V--S-----SYTINEIIYEYLTQRTGKR 138 (152)
Q Consensus 78 ~~~~l~~~------gi~~~-----~~lp~VG~nl~dh~~~~~~~~~~~~~~-~--~-----~~~~~~~~~~y~~~~~G~l 138 (152)
|+++|+++ ||+++ +||| ||+|||||+.. .+.+. .... . + .........+|+..++||+
T Consensus 273 ~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL~DH~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 349 (546)
T 1kdg_A 273 PTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNAQDNPSI-NLVFT-HPSIDAYENWADVWSNPRPADAAQYLANQSGVF 349 (546)
T ss_dssp CHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTBBCCCCE-EEEEE-CTTCCCGGGGTTTTTSCCHHHHHHHHHHSCSGG
T ss_pred cHHHHHHhhccccCCcccccccccccCC-cccCcccCcce-eEEEe-cCCcccccchhhhhcchhHHHHHHHHHcCCccc
Confidence 99999998 58874 8999 99999999999 88877 3222 1 1 0112345778998899998
Q ss_pred ccc
Q psy17300 139 RRK 141 (152)
Q Consensus 139 ~~~ 141 (152)
+..
T Consensus 350 ~~~ 352 (546)
T 1kdg_A 350 AGA 352 (546)
T ss_dssp GSC
T ss_pred ccC
Confidence 754
No 9
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.81 E-value=1.5e-20 Score=166.12 Aligned_cols=111 Identities=13% Similarity=0.237 Sum_probs=100.2
Q ss_pred CcchhhhHHhh------hcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhh
Q psy17300 1 MIASSIFLRAI------KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQ 73 (152)
Q Consensus 1 ~Ss~~~~l~~~------~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~ 73 (152)
||+..+++.++ ..++|++|++++.|++|+++.++++++||++.+ .+|+.+++.| ++||+|+|++.||++|++
T Consensus 253 ~s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A-~~VIlaaG~~~s~~lL~~ 331 (623)
T 3pl8_A 253 WSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKA-DVYVLTAGAVHNTQLLVN 331 (623)
T ss_dssp ECCHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECE-EEEEECSCTTHHHHHHHT
T ss_pred cchHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEEC-CEEEEcCCCcCCHHHHHh
Confidence 56778888877 677899999999999999985456999999997 4688888999 599999999999999999
Q ss_pred CCCCChhhhhhcCCCcccCCcccccccccCcCcceEEEEEeC
Q psy17300 74 SGVGDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYTFTK 115 (152)
Q Consensus 74 Sgig~~~~l~~~gi~~~~~lp~VG~nl~dh~~~~~~~~~~~~ 115 (152)
||||+...++.+||++ +||+||+|||||++. .+.+.+++
T Consensus 332 sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~-~~~~~~~~ 370 (623)
T 3pl8_A 332 SGFGQLGRPNPANPPE--LLPSLGSYITEQSLV-FCQTVMST 370 (623)
T ss_dssp TTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEE-EEEEEECH
T ss_pred cCCCccccccccCCCC--CCcccccchhhCcCc-eEEEEECC
Confidence 9999999999999999 999999999999999 99888875
No 10
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.78 E-value=3e-19 Score=153.59 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=85.3
Q ss_pred CcchhhhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCC---cEEEEEeCcEEEEccCCccChHHHhhCC-C
Q psy17300 1 MIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQG---KTIKVNANREVVLAANSINSVRILQQSG-V 76 (152)
Q Consensus 1 ~Ss~~~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g---~~~~~~a~k~VIlaaGai~tP~lLl~Sg-i 76 (152)
+|++.+||.++.+++|++|++++.|+||++++++++++||++.+.+| +.++++| ++||||||+|+||+||++|| |
T Consensus 221 ~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A-~~VIlaaG~~~s~~lL~~Sg~i 299 (504)
T 1n4w_A 221 QSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISC-RYLFLGAGSLGSTELLVRARDT 299 (504)
T ss_dssp CCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEE-EEEEECSHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEee-CEEEEccCCCCCHHHHHhcccc
Confidence 46788999998889999999999999999985345899999986566 5678999 59999999999999999999 8
Q ss_pred CChhhhhhcCCCcccCCcccccccccCcCcceEEEE
Q psy17300 77 GDAALLSKYNIPLVKNLPGVGKRLSLHPMFFGLSYT 112 (152)
Q Consensus 77 g~~~~l~~~gi~~~~~lp~VG~nl~dh~~~~~~~~~ 112 (152)
| ||+++. ++||+|||||+.. .+.+.
T Consensus 300 g--------~i~~~~--~~VG~nl~dh~~~-~~~~~ 324 (504)
T 1n4w_A 300 G--------TLPNLN--SEVGAGWGPNGNI-MTARA 324 (504)
T ss_dssp T--------SSTTCC--TTTTCCBBCTTCE-EEEEE
T ss_pred C--------CCCCCC--hhhccccccCCcc-eeeec
Confidence 7 677664 4799999999987 55543
No 11
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.70 E-value=2.1e-17 Score=142.36 Aligned_cols=95 Identities=20% Similarity=0.235 Sum_probs=79.9
Q ss_pred CcchhhhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCC---cEEEEEeCcEEEEccCCccChHHHhhCC-C
Q psy17300 1 MIASSIFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQG---KTIKVNANREVVLAANSINSVRILQQSG-V 76 (152)
Q Consensus 1 ~Ss~~~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g---~~~~~~a~k~VIlaaGai~tP~lLl~Sg-i 76 (152)
||++.+||.++.+++|++|++++.|+||++++++.+++||++.+.+| +.++++| ++||||||+|+||+||++|| |
T Consensus 226 ~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A-~~VIlaaGa~~sp~lL~~Sg~i 304 (507)
T 1coy_A 226 KSLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTA-DRVFFAAGSVGTSKLLVSMKAQ 304 (507)
T ss_dssp CCTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEE-EEEEECSHHHHHHHHHHHHHHT
T ss_pred cChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEe-CEEEEccCccCCHHHHHhcccC
Confidence 57889999998889999999999999999985234899999985456 3678999 59999999999999999999 8
Q ss_pred CChhhhhhcCCCcccCCcccccccccCcCc
Q psy17300 77 GDAALLSKYNIPLVKNLPGVGKRLSLHPMF 106 (152)
Q Consensus 77 g~~~~l~~~gi~~~~~lp~VG~nl~dh~~~ 106 (152)
| ++|+.. ++||+||+||+..
T Consensus 305 G--------~lpnl~--d~VG~~l~~h~~~ 324 (507)
T 1coy_A 305 G--------HLPNLS--SQVGEGWGNNGNI 324 (507)
T ss_dssp T--------SSTTSC--TTTTCCBBCTTEE
T ss_pred C--------CCCccC--hhhCCccccCCcc
Confidence 8 244332 3799999999865
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.77 E-value=6e-05 Score=64.31 Aligned_cols=57 Identities=30% Similarity=0.451 Sum_probs=47.0
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc-ChHHH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN-SVRIL 71 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~-tP~lL 71 (152)
.+.+++|++++.|++|+.++ +++++||.+.+ +++.++++|+|.||||+|++. +|.+|
T Consensus 213 ~~~Gv~i~~~t~v~~L~~~~-~g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~n~~m~ 270 (510)
T 4at0_A 213 EKLGVRAEYDMRVQTLVTDD-TGRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAYNDKMI 270 (510)
T ss_dssp HHTTCEEECSEEEEEEEECT-TCCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred HHcCCEEEecCEeEEEEECC-CCcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhhCHHHH
Confidence 34589999999999999874 57899999984 566778999669999999998 55554
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.94 E-value=0.0022 Score=55.34 Aligned_cols=54 Identities=22% Similarity=0.301 Sum_probs=45.4
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccCh
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSV 68 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP 68 (152)
.+.+++|++++.|++|+.++ +++++||.+.+.+|+...++| +.||+|+|++...
T Consensus 261 ~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~A-~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 261 KEQGIDTRLNSRVVKLVVND-DHSVVGAVVHGKHTGYYMIGA-KSVVLATGGYGMN 314 (566)
T ss_dssp HHTTCCEECSEEEEEEEECT-TSBEEEEEEEETTTEEEEEEE-EEEEECCCCCTTC
T ss_pred HhcCCEEEeCCEEEEEEECC-CCcEEEEEEEeCCCcEEEEEc-CEEEEecCCcccC
Confidence 35689999999999998872 279999999865777778999 7999999999864
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.90 E-value=0.003 Score=54.41 Aligned_cols=53 Identities=21% Similarity=0.238 Sum_probs=44.3
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~t 67 (152)
.+.+++|++++.|++|+.++ +++++||.+.+.+|+...++| +.||+|+|.+..
T Consensus 266 ~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~a-~~VVlAtGg~~~ 318 (571)
T 1y0p_A 266 VKRNIDLRMNTRGIEVLKDD-KGTVKGILVKGMYKGYYWVKA-DAVILATGGFAK 318 (571)
T ss_dssp HHTTCEEESSEEEEEEEECT-TSCEEEEEEEETTTEEEEEEC-SEEEECCCCCTT
T ss_pred HhcCCEEEeCCEeeEeEEcC-CCeEEEEEEEeCCCcEEEEEC-CeEEEeCCCccc
Confidence 35689999999999998873 378999999865677778999 689999999875
No 15
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.86 E-value=0.0033 Score=54.45 Aligned_cols=57 Identities=26% Similarity=0.266 Sum_probs=45.7
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccC-hHHH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS-VRIL 71 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~t-P~lL 71 (152)
.+.+++|++++.|++|+.++ +++++||.+.+.+|+...++| +.||||+|.+.. +.++
T Consensus 266 ~~~gv~i~~~t~v~~l~~~~-~g~v~GV~~~~~~G~~~~i~A-~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 266 VKRGTDIRLNSRVVRILEDA-SGKVTGVLVKGEYTGYYVIKA-DAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEEC-SEEEECCCCCTTCHHHH
T ss_pred HHcCCeEEecCEEEEEEECC-CCeEEEEEEEeCCCcEEEEEc-CEEEEeCCCCccCHHHH
Confidence 35689999999999998762 278999999865677778999 799999999874 4444
No 16
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.67 E-value=0.0066 Score=53.46 Aligned_cols=52 Identities=13% Similarity=0.116 Sum_probs=45.2
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~t 67 (152)
.+.+++|+.++.|++|+.+ ++++.||.+.+ .+|+.+.++| +.||||+|++..
T Consensus 166 ~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~~ 218 (621)
T 2h88_A 166 LRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRA-KNTVIATGGYGR 218 (621)
T ss_dssp TTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred HhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEc-CeEEECCCcccc
Confidence 4678999999999999987 67999999986 4677778999 699999999875
No 17
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.55 E-value=0.0079 Score=52.60 Aligned_cols=55 Identities=22% Similarity=0.250 Sum_probs=45.3
Q ss_pred hhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccCh
Q psy17300 11 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSV 68 (152)
Q Consensus 11 ~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP 68 (152)
+.+.+|++++.++.|++|+.+ ++++.||.+.+ .+|+.+.++| +.||+|+|+....
T Consensus 144 ~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 144 SLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRA-NAVVMATGGAGRV 199 (602)
T ss_dssp HTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEEC-SCEEECCCCCGGG
T ss_pred HHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEc-CeEEECCCCCccc
Confidence 444556999999999999987 67899998876 4677778999 6899999998765
No 18
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.43 E-value=0.0071 Score=52.68 Aligned_cols=52 Identities=21% Similarity=0.229 Sum_probs=43.8
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~t 67 (152)
+.+++|+.++.|++|+.++ ++++.||.+.+ .+|..+.++| +.||+|+|++..
T Consensus 155 ~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGg~~~ 207 (588)
T 2wdq_A 155 KNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKA-RATVLATGGAGR 207 (588)
T ss_dssp HTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEE-EEEEECCCCCGG
T ss_pred hCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEc-CEEEECCCCCcc
Confidence 4589999999999998863 46899999886 4677778999 699999999875
No 19
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.36 E-value=0.0085 Score=51.61 Aligned_cols=55 Identities=20% Similarity=0.292 Sum_probs=44.5
Q ss_pred hhcCCCcEEEcCcEEEEEEEeCCCC------eEEEEEEEc-CCCcEEEEEeCcEEEEccCCccC
Q psy17300 11 IKDKNTVQVSKNSEVTKLCFDETKT------KVTGVEFRN-PQGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 11 ~~~~~nl~l~~~~~V~ri~~~~~~~------~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~t 67 (152)
+.+.++++|+.++.|++|+.++ ++ ++.||.+.+ .+|+.+.++| +.||+|+|....
T Consensus 148 ~~~~~gv~i~~~~~v~~L~~~~-~g~~~~~~~v~Gv~~~~~~~G~~~~i~A-~~VVlAtGg~~~ 209 (540)
T 1chu_A 148 ALNHPNIRVLERTNAVDLIVSD-KIGLPGTRRVVGAWVWNRNKETVETCHA-KAVVLATGGASK 209 (540)
T ss_dssp HHHCTTEEEECSEEEEEEEEGG-GTTCCSSCBEEEEEEEETTTTEEEEEEC-SEEEECCCCCGG
T ss_pred HHcCCCCEEEeCcEEEEEEEcC-CCCcccCCEEEEEEEEEcCCCcEEEEEc-CeEEECCCCccc
Confidence 3344799999999999999843 34 899999986 3577778998 799999999874
No 20
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.24 E-value=0.01 Score=52.67 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=44.0
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~t 67 (152)
+.+++|+.++.|++|+.+ ++++.||.+.+ .+|..+.++| +.||||+|++..
T Consensus 170 ~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A-~~VVlATGG~~~ 221 (660)
T 2bs2_A 170 KLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVA-KGTLIATGGYGR 221 (660)
T ss_dssp HHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEC-SEEEECCCCCGG
T ss_pred hCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEc-CEEEEccCcchh
Confidence 458999999999999887 67999999876 4677778999 699999999874
No 21
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.01 E-value=0.017 Score=49.99 Aligned_cols=59 Identities=10% Similarity=0.216 Sum_probs=47.9
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
+.+.+++.++.|++|..+ ++++++|.+.|. ++....++| +.||+|+|+. +..++...|+
T Consensus 200 ~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A-~~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 200 EDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKA-KLVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEB-SCEEECCGGG-HHHHHTTCCS
T ss_pred HcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEc-CEEEECCChh-HHHHHHhhcc
Confidence 567999999999999887 568999999863 566667999 7999999987 6777765554
No 22
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=95.96 E-value=0.024 Score=48.92 Aligned_cols=60 Identities=20% Similarity=0.210 Sum_probs=49.6
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
+.+.+++.++.|++|..+ ++++++|.+.| .+|+...++| +.||+|+|+. +..++...|+.
T Consensus 182 ~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A-~~VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 182 ARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYA-KKVVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEE-EEEEECCGGG-HHHHHHTTTCC
T ss_pred HcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEEC-CEEEECCCcc-hHHHHHhcCCC
Confidence 468999999999999887 67899999986 3566788999 7999999875 77787777664
No 23
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.62 E-value=0.04 Score=46.63 Aligned_cols=61 Identities=26% Similarity=0.414 Sum_probs=47.3
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l 70 (152)
+|.....+.+++++.++.|++|..+ ++++++|.+.+.+|.+.+++| +.||.|.|.-..-+-
T Consensus 116 ~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~a-d~VI~AdG~~S~vr~ 176 (512)
T 3e1t_A 116 MLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHA-RFIVDASGNRTRVSQ 176 (512)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEE-EEEEECCCTTCSSGG
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEc-CEEEECCCcchHHHH
Confidence 3433333478999999999999887 678999999876787778888 699999988654443
No 24
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.59 E-value=0.014 Score=48.76 Aligned_cols=54 Identities=19% Similarity=0.259 Sum_probs=36.6
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhh
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQ 73 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~ 73 (152)
.+.+.+|++++.|++|+.+ +++++||+.. +|+ ++.| +.||.++..-.+.+.|+-
T Consensus 232 ~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~--~g~--~~~a-d~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 232 QDLGGEVVLNARVSHMETT--GNKIEAVHLE--DGR--RFLT-QAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHTTCEEECSCCEEEEEEE--TTEEEEEEET--TSC--EEEC-SCEEECCC----------
T ss_pred HHhCCceeeecceeEEEee--CCeEEEEEec--CCc--EEEc-CEEEECCCHHHHHHHhcc
Confidence 3567899999999999998 7899999885 554 4667 689999999888877753
No 25
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=95.55 E-value=0.023 Score=49.96 Aligned_cols=50 Identities=18% Similarity=0.137 Sum_probs=42.1
Q ss_pred Cc-EEEcCcEEEEEEEeCCC--CeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccC
Q psy17300 16 TV-QVSKNSEVTKLCFDETK--TKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 16 nl-~l~~~~~V~ri~~~~~~--~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~t 67 (152)
++ +++.++.|++|+.++ + ++++||.+.+ .+|..+.++| +.||+|+|....
T Consensus 166 gv~~i~~~~~v~~L~~~~-~~~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDN-NDPNAVAGAVGFSVREPKFYVFKA-KAVILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECT-TCTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcC-CccceeEEEEEEEecCCcEEEEEc-CEEEECCCcccc
Confidence 89 999999999998873 2 3999999875 4677778898 899999999886
No 26
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=95.33 E-value=0.021 Score=44.93 Aligned_cols=59 Identities=10% Similarity=0.136 Sum_probs=43.3
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhC-CCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQS-GVG 77 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~S-gig 77 (152)
.+.++++++++.|++|..++ +.+..|.. .+|....++| +.||+|+|+- |++|+... |+.
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~--~~~~~v~~--~~g~~~~~~a-~~VV~A~G~~-s~~l~~~~~g~~ 220 (369)
T 3dme_A 161 ESDGAQLVFHTPLIAGRVRP--EGGFELDF--GGAEPMTLSC-RVLINAAGLH-APGLARRIEGIP 220 (369)
T ss_dssp HHTTCEEECSCCEEEEEECT--TSSEEEEE--CTTSCEEEEE-EEEEECCGGG-HHHHHHTEETSC
T ss_pred HHCCCEEECCCEEEEEEEcC--CceEEEEE--CCCceeEEEe-CEEEECCCcc-hHHHHHHhcCCC
Confidence 35689999999999998774 33233544 3565567888 6899999986 77887766 764
No 27
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=95.16 E-value=0.1 Score=40.67 Aligned_cols=53 Identities=15% Similarity=0.101 Sum_probs=40.8
Q ss_pred hhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc----------CCCcEEEEEeCcEEEEccCCcc
Q psy17300 11 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN----------PQGKTIKVNANREVVLAANSIN 66 (152)
Q Consensus 11 ~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~----------~~g~~~~~~a~k~VIlaaGai~ 66 (152)
+.+.+++++++++.|++|..+ ++++.+|.+.+ ..+....+++ +.||+|+|...
T Consensus 129 ~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~a-d~VV~AtG~~s 191 (284)
T 1rp0_A 129 LLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEA-KIVVSSCGHDG 191 (284)
T ss_dssp HHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEE-EEEEECCCSSS
T ss_pred HHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEEC-CEEEECCCCch
Confidence 444579999999999999887 67888998862 1134467888 79999999743
No 28
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.13 E-value=0.023 Score=50.34 Aligned_cols=50 Identities=16% Similarity=0.192 Sum_probs=42.8
Q ss_pred CcEEEcCcEEEEEEEeCCC--CeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccC
Q psy17300 16 TVQVSKNSEVTKLCFDETK--TKVTGVEFRN-PQGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 16 nl~l~~~~~V~ri~~~~~~--~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~t 67 (152)
+++++.++.|+.|+.++ + +++.||.+.+ .+|..+.++| +.||||+|.+..
T Consensus 182 gV~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~A-k~VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKA-NAMVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEe-CEEEECCCcccc
Confidence 89999999999999874 3 4999998876 4677788999 799999999874
No 29
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=95.01 E-value=0.032 Score=45.73 Aligned_cols=52 Identities=23% Similarity=0.332 Sum_probs=40.9
Q ss_pred cCCCcEEEcCc---EEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 13 DKNTVQVSKNS---EVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 13 ~~~nl~l~~~~---~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
.+.++++++++ .|++|..+ +++++||... +|. .++| +.||+|+|+. |++|+-
T Consensus 172 ~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~--~G~--~i~A-d~VV~AtG~~-s~~l~~ 226 (438)
T 3dje_A 172 QRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTA--DGK--IWRA-ERTFLCAGAS-AGQFLD 226 (438)
T ss_dssp HHTTCEEEESTTTTCEEEEEEE--TTEEEEEEET--TTE--EEEC-SEEEECCGGG-GGGTSC
T ss_pred HhcCCEEEeCCcCceEEEEEec--CCeEEEEEEC--CCC--EEEC-CEEEECCCCC-hhhhcC
Confidence 35689999999 99999887 6788888774 453 5778 6899999987 566654
No 30
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=94.72 E-value=0.1 Score=43.17 Aligned_cols=53 Identities=23% Similarity=0.248 Sum_probs=43.1
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCcEEEEEeCcEEEEccCCccChH
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
+.+++++.++.|+++..+ ++.+++|.+.+. +|....++| +.||.|.|+-...+
T Consensus 112 ~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~a-d~VV~AdG~~s~vr 165 (453)
T 3atr_A 112 DRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYS-KVVVEATGYSRSFR 165 (453)
T ss_dssp HTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEEC-SEEEECCGGGCTTG
T ss_pred HcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEc-CEEEECcCCchhhH
Confidence 478999999999999887 678899998754 676677888 69999999865543
No 31
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=94.65 E-value=0.13 Score=39.52 Aligned_cols=64 Identities=19% Similarity=0.256 Sum_probs=50.1
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhh
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQ 73 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~ 73 (152)
++..+..+.++++++++.|.+|.-+ ++++.+|.+...+|.+..+.+ ..||+|.|..-++.++..
T Consensus 188 ~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~~v~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~~ 251 (315)
T 3r9u_A 188 TVEKVKKNEKIELITSASVDEVYGD--KMGVAGVKVKLKDGSIRDLNV-PGIFTFVGLNVRNEILKQ 251 (315)
T ss_dssp HHHHHHHCTTEEEECSCEEEEEEEE--TTEEEEEEEECTTSCEEEECC-SCEEECSCEEECCGGGBC
T ss_pred HHHHHHhcCCeEEEeCcEEEEEEcC--CCcEEEEEEEcCCCCeEEeec-CeEEEEEcCCCCchhhhc
Confidence 3344445789999999999999766 568889988755677777888 599999998877766654
No 32
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=94.59 E-value=0.089 Score=43.72 Aligned_cols=50 Identities=16% Similarity=0.315 Sum_probs=40.4
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
.+.+++|++++.|++|..+ ++++.+|.+. +|. .++| +.||+|+|+...|.
T Consensus 145 ~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~--~G~--~i~A-d~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 145 KDLGVKIRTNTPVETIEYE--NGQTKAVILQ--TGE--VLET-NHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHTTCEEECSCCEEEEEEE--TTEEEEEEET--TCC--EEEC-SCEEECCCCSSSGG
T ss_pred HHCCCEEEeCcEEEEEEec--CCcEEEEEEC--CCC--EEEC-CEEEECCCCCcCCC
Confidence 3478999999999999887 5677788764 453 4788 79999999998774
No 33
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.29 E-value=0.19 Score=38.79 Aligned_cols=59 Identities=19% Similarity=0.356 Sum_probs=45.9
Q ss_pred hhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 11 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 11 ~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
+.+..++++++++.|.+|.-+ ++++.+|.+.+ .+|.+..+.+ ..||+|.|..-++.+|.
T Consensus 189 l~~~~gv~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 189 LRSLKNVDIILNAQTTEVKGD--GSKVVGLEYRDRVSGDIHNIEL-AGIFVQIGLLPNTNWLE 248 (310)
T ss_dssp HHTCTTEEEESSEEEEEEEES--SSSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGT
T ss_pred HhhCCCeEEecCCceEEEEcC--CCcEEEEEEEECCCCcEEEEEc-CEEEEeeCCccCchHHh
Confidence 333478999999999998754 56788999986 3566677888 69999999887766664
No 34
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=94.26 E-value=0.23 Score=39.29 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=46.9
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.++++++++.|.+|.-+ ++++.+|.+...+|....+.+ +.||+|.|..-++.+|..+|+
T Consensus 213 ~~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 213 ANGTIDVYLETEVASIEES--NGVLTRVHLRSSDGSKWTVEA-DRLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp HHTSEEEESSEEEEEEEEE--TTEEEEEEEEETTCCEEEEEC-SEEEECCCBCCSCGGGGGSSC
T ss_pred hcCceEEEcCcCHHHhccC--CCceEEEEEEecCCCeEEEeC-CEEEECCCCCCCHHHHHhhcc
Confidence 3567999999999999776 567888888644676677888 699999997766667665554
No 35
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=94.25 E-value=0.16 Score=39.38 Aligned_cols=63 Identities=8% Similarity=0.151 Sum_probs=48.2
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhh
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQ 73 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~ 73 (152)
+..+.+..++++++++.|.+|.-+ ++++.+|.+.+ .+|....+.+ ..||+|.|..-++.++..
T Consensus 215 ~~~l~~~~gv~i~~~~~v~~i~~~--~~~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~~~ 278 (338)
T 3itj_A 215 QKRAEKNEKIEILYNTVALEAKGD--GKLLNALRIKNTKKNEETDLPV-SGLFYAIGHTPATKIVAG 278 (338)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEES--SSSEEEEEEEETTTTEEEEEEC-SEEEECSCEEECCGGGBT
T ss_pred HHHHHhcCCeEEeecceeEEEEcc--cCcEEEEEEEECCCCceEEEEe-CEEEEEeCCCCChhHhhC
Confidence 333445569999999999999766 56788999986 3455677888 699999998877766643
No 36
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.22 E-value=0.31 Score=37.33 Aligned_cols=67 Identities=21% Similarity=0.277 Sum_probs=51.6
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
++..+.++.++++++++.|.++.-+ +++.+|.+.+ .+|++..+.+ ..||+|.|..-+..+|..+|+.
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~~~g~~ 262 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGD---KVVKQVVVENLKTGEIKELNV-NGVFIEIGFDPPTDFAKSNGIE 262 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEEC-SEEEECCCEECCHHHHHHTTCC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEecc---CceeEEEEEECCCCceEEEEc-CEEEEEECCCCChhHHhhcCee
Confidence 3444556679999999999998654 4677888886 3577677888 6999999988887788777663
No 37
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=94.17 E-value=0.063 Score=43.51 Aligned_cols=51 Identities=16% Similarity=0.219 Sum_probs=41.5
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
+.+.+|++++.|++|..+ ++++++|.. +|. .+.| +.||+|+++-.+++||-
T Consensus 208 ~~G~~i~~~~~V~~i~~~--~~~~~gv~~---~g~--~~~a-d~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 208 ANGGKIHTGQEVSKILIE--NGKAAGIIA---DDR--IHDA-DLVISNLGHAATAVLCS 258 (425)
T ss_dssp HTTCEEECSCCEEEEEEE--TTEEEEEEE---TTE--EEEC-SEEEECSCHHHHHHHTT
T ss_pred HcCCEEEECCceeEEEEE--CCEEEEEEE---CCE--EEEC-CEEEECCCHHHHHHhcC
Confidence 457899999999999988 678888865 243 5778 69999999998888664
No 38
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.98 E-value=0.12 Score=40.20 Aligned_cols=60 Identities=28% Similarity=0.447 Sum_probs=47.7
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
+.++++++++.|.+|.-+ ++++.+|.+.+ .+|....+.+ +.||+|.|..-++.+|..+|+
T Consensus 202 ~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGD--GKKVTGVKYKDRTTGEEKLIET-DGVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HTTCCEECSEEEEEEEES--SSSEEEEEEEETTTCCEEEECC-SEEEECCCEEECCGGGTTSCC
T ss_pred cCCcEEEcCCeEEEEecC--CceEEEEEEEEcCCCceEEEec-CEEEEeeCCccChHHHhhccc
Confidence 568999999999998755 45688898875 3576667888 699999999888877776655
No 39
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.86 E-value=0.12 Score=41.13 Aligned_cols=50 Identities=22% Similarity=0.256 Sum_probs=39.6
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 66 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~ 66 (152)
.+.+++++.++.|+++..+ ++.++||.+.+ .+....++| +.||.|.|.-.
T Consensus 113 ~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~-~~~~~~~~a-~~vV~A~G~~s 162 (397)
T 3cgv_A 113 AKAGADVWVKSPALGVIKE--NGKVAGAKIRH-NNEIVDVRA-KMVIAADGFES 162 (397)
T ss_dssp HHHTCEEESSCCEEEEEEE--TTEEEEEEEEE-TTEEEEEEE-EEEEECCCTTC
T ss_pred HhCCCEEEECCEEEEEEEe--CCEEEEEEEEE-CCeEEEEEc-CEEEECCCcch
Confidence 3468999999999999887 67899999874 344567888 68888888654
No 40
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.69 E-value=0.081 Score=42.24 Aligned_cols=56 Identities=20% Similarity=0.299 Sum_probs=41.6
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
.+.+++++.++.|++|..+ ++++++|... +| .++| +.||+|+|+. ++.++...|+.
T Consensus 160 ~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~--~g---~i~a-~~VV~A~G~~-s~~l~~~~g~~ 215 (382)
T 1y56_B 160 KEYGAKLLEYTEVKGFLIE--NNEIKGVKTN--KG---IIKT-GIVVNATNAW-ANLINAMAGIK 215 (382)
T ss_dssp HHTTCEEECSCCEEEEEES--SSBEEEEEET--TE---EEEC-SEEEECCGGG-HHHHHHHHTCC
T ss_pred HHCCCEEECCceEEEEEEE--CCEEEEEEEC--Cc---EEEC-CEEEECcchh-HHHHHHHcCCC
Confidence 3568999999999999876 5677777652 34 5888 6899999986 55666555543
No 41
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=93.20 E-value=0.21 Score=42.10 Aligned_cols=54 Identities=19% Similarity=0.150 Sum_probs=43.0
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
+.+++++.++.|++|..+ + .+.+|.+.| .+|++..++| +.||+|+|+. +..++.
T Consensus 161 ~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A-~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 161 RKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQA-RGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEE-SCEEECCGGG-HHHHHH
T ss_pred HcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEEC-CEEEECCChh-HHHHHH
Confidence 457999999999999877 3 578888876 3577778999 7999999986 566654
No 42
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.11 E-value=0.56 Score=36.06 Aligned_cols=64 Identities=11% Similarity=0.138 Sum_probs=48.3
Q ss_pred HhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 9 RAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 9 ~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
..+.+..++++++++.|.+|.-+ ++++.+|.+.+ .+|++..+.+ ..||+|.|..-+..+|..+|
T Consensus 186 ~~l~~~~gv~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~g 250 (311)
T 2q0l_A 186 EHAKNNDKIEFLTPYVVEEIKGD--ASGVSSLSIKNTATNEKRELVV-PGFFIFVGYDVNNAVLKQED 250 (311)
T ss_dssp HHHHTCTTEEEETTEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEC-SEEEECSCEEECCGGGBCTT
T ss_pred HHHhhCCCeEEEeCCEEEEEECC--CCcEeEEEEEecCCCceEEEec-CEEEEEecCccChhhhhccc
Confidence 33444578999999999999765 45777888874 3576677888 59999999887777776553
No 43
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.92 E-value=0.39 Score=37.07 Aligned_cols=57 Identities=16% Similarity=0.303 Sum_probs=44.4
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-C-CcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-Q-GKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~-g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
.+.++++++++.|.+|.-+ ++++.+|.+.+. + |....+.+ ..||+|.|..-++.+|.
T Consensus 195 ~~~gv~i~~~~~v~~i~~~--~~~v~~v~~~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~~~ 253 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGD--QMGVTGVRLRDTQNSDNIESLDV-AGLFVAIGHSPNTAIFE 253 (320)
T ss_dssp HTSSEEEECSCEEEEEEEC--SSSEEEEEEECCTTCCCCEEEEC-SEEEECSCEEESCGGGT
T ss_pred ccCCeEEEcCceeEEEEcC--CCceEEEEEEeccCCCceEEEEc-CEEEEEeCCCCChHHhc
Confidence 4578999999999998765 457888998852 2 55567888 59999999887776654
No 44
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=92.88 E-value=0.12 Score=42.52 Aligned_cols=57 Identities=18% Similarity=0.256 Sum_probs=41.1
Q ss_pred cCCCcEEEcCcEEEEEEEeC-------------CCCeEEEEEEEcCCCcEEEE--EeCcEEEEccCCccChHHHhhCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDE-------------TKTKVTGVEFRNPQGKTIKV--NANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~-------------~~~~~~gV~~~~~~g~~~~~--~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.+++++.++.|++|..+. +++++.+|.. .+| .+ +| +.||+|+|+. +++|+...|+
T Consensus 192 ~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t--~~g---~i~~~A-d~VV~AtG~~-s~~l~~~~g~ 263 (448)
T 3axb_A 192 SGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVL--SDG---TRVEVG-EKLVVAAGVW-SNRLLNPLGI 263 (448)
T ss_dssp HHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEE--TTS---CEEEEE-EEEEECCGGG-HHHHHGGGTC
T ss_pred HhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEe--CCC---EEeecC-CEEEECCCcC-HHHHHHHcCC
Confidence 35689999999999998720 1456667764 345 36 78 6999999986 6777766554
No 45
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=92.69 E-value=0.28 Score=39.94 Aligned_cols=64 Identities=19% Similarity=0.343 Sum_probs=49.6
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
++.....+.++++++++.|.+|..+ ++++.+|.+. +|. .+.+ ..||+|+|..-+..++..+|+.
T Consensus 189 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~--dG~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 189 YFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLS--DGN--TLPC-DLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEET--TSC--EEEC-SEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeC--CCC--EEEc-CEEEECcCCccCHHHHHhCCCC
Confidence 3444445678999999999999876 5688888875 554 4667 6999999998888888877764
No 46
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=92.51 E-value=0.15 Score=40.88 Aligned_cols=55 Identities=33% Similarity=0.433 Sum_probs=40.7
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.+++++.++.|++|..+ ++++.+|... +| .+++ +.||+|+|+. ++.++...|+
T Consensus 185 ~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~--~g---~~~a-~~vV~a~G~~-s~~l~~~~g~ 239 (405)
T 2gag_B 185 NEMGVDIIQNCEVTGFIKD--GEKVTGVKTT--RG---TIHA-GKVALAGAGH-SSVLAEMAGF 239 (405)
T ss_dssp HHTTCEEECSCCEEEEEES--SSBEEEEEET--TC---CEEE-EEEEECCGGG-HHHHHHHHTC
T ss_pred HHCCCEEEcCCeEEEEEEe--CCEEEEEEeC--Cc---eEEC-CEEEECCchh-HHHHHHHcCC
Confidence 3568999999999999876 5667777653 44 4777 6899999975 4566665554
No 47
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=92.24 E-value=0.33 Score=39.17 Aligned_cols=49 Identities=20% Similarity=0.222 Sum_probs=36.8
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 66 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~ 66 (152)
+.+++++.++.|+.|..++ +.+. |.+.+.+|..++++| +.||.|+|.-.
T Consensus 118 ~~gv~i~~~~~v~~i~~~~--~~~~-v~v~~~~g~~~~~~a-~~vV~A~G~~s 166 (421)
T 3nix_A 118 RQGVDVEYEVGVTDIKFFG--TDSV-TTIEDINGNKREIEA-RFIIDASGYGR 166 (421)
T ss_dssp HHTCEEECSEEEEEEEEET--TEEE-EEEEETTSCEEEEEE-EEEEECCGGGC
T ss_pred hCCCEEEcCCEEEEEEEeC--CEEE-EEEEcCCCCEEEEEc-CEEEECCCCch
Confidence 3589999999999998873 3332 555546787778998 68999988543
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=92.19 E-value=0.31 Score=39.78 Aligned_cols=64 Identities=25% Similarity=0.347 Sum_probs=49.4
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
++.....+.++++++++.|.+|.-+ ++++++|.+. +|. .+.+ ..||+|+|..-+..+|..+|+.
T Consensus 199 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~--dG~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 199 FYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQ--DGS--VIPA-DIVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEES--SSC--EEEC-SEEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeC--CCC--EEEc-CEEEECCCCccChHHHHhCCCC
Confidence 3444445678999999999998765 5678888875 454 4667 6999999999888888877764
No 49
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=91.66 E-value=0.65 Score=38.04 Aligned_cols=60 Identities=15% Similarity=0.197 Sum_probs=44.0
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCC-----------------CCeEEEEEEEc----CCC------cEEEEEeCcEEE
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDET-----------------KTKVTGVEFRN----PQG------KTIKVNANREVV 59 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~-----------------~~~~~gV~~~~----~~g------~~~~~~a~k~VI 59 (152)
++..+...++++++.++.|+.++.+++ ..++.||.+.. .++ ...+++| +.||
T Consensus 166 L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A-k~VV 244 (344)
T 3jsk_A 166 VLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA-PVII 244 (344)
T ss_dssp HHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC-SEEE
T ss_pred HHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc-CEEE
Confidence 344455568999999999999988741 12899998852 223 3467888 7999
Q ss_pred EccCCccC
Q psy17300 60 LAANSINS 67 (152)
Q Consensus 60 laaGai~t 67 (152)
+|.|.-..
T Consensus 245 ~ATG~~s~ 252 (344)
T 3jsk_A 245 STTGHDGP 252 (344)
T ss_dssp ECCCSSSS
T ss_pred ECCCCCch
Confidence 99997654
No 50
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=91.25 E-value=0.26 Score=38.89 Aligned_cols=55 Identities=27% Similarity=0.155 Sum_probs=39.0
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
.+.+++++.++.|++|..+ ++. .+| ...+| .++| +.||+|+|+- ++.|+...|+.
T Consensus 165 ~~~Gv~i~~~~~V~~i~~~--~~~-~~V--~t~~g---~i~a-~~VV~A~G~~-s~~l~~~~g~~ 219 (381)
T 3nyc_A 165 RRNQGQVLCNHEALEIRRV--DGA-WEV--RCDAG---SYRA-AVLVNAAGAW-CDAIAGLAGVR 219 (381)
T ss_dssp HHTTCEEESSCCCCEEEEE--TTE-EEE--ECSSE---EEEE-SEEEECCGGG-HHHHHHHHTCC
T ss_pred HHCCCEEEcCCEEEEEEEe--CCe-EEE--EeCCC---EEEc-CEEEECCChh-HHHHHHHhCCC
Confidence 3458999999999999887 443 333 32333 5788 6899999975 56677665653
No 51
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.24 E-value=0.75 Score=39.02 Aligned_cols=56 Identities=21% Similarity=0.331 Sum_probs=44.7
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
.+++++++++.|++|.-+ ++++++|.+.+ .+|.+..+.+ ..||+|.|..-+..+|.
T Consensus 403 ~~gV~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~pn~~~l~ 459 (521)
T 1hyu_A 403 LKNVDIILNAQTTEVKGD--GSKVVGLEYRDRVSGDIHSVAL-AGIFVQIGLLPNTHWLE 459 (521)
T ss_dssp CTTEEEECSEEEEEEEEC--SSSEEEEEEEETTTCCEEEEEC-SEEEECCCEEESCGGGT
T ss_pred CCCcEEEeCCEEEEEEcC--CCcEEEEEEEeCCCCceEEEEc-CEEEECcCCCCCchHHh
Confidence 379999999999998754 56788999986 4577777888 59999999876666654
No 52
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.13 E-value=0.94 Score=35.11 Aligned_cols=65 Identities=18% Similarity=0.271 Sum_probs=47.7
Q ss_pred hhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 10 AIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 10 ~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+..+.++++++++.|.+|.-+.++.++.+|.+.+. +|....+.+ ..||+|.|..-+..+|. +++
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~~-~~l 268 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKV-SGLFFAIGHEPATKFLD-GGV 268 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGT-TSS
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEec-CEEEEEeCCccchHHhh-ccc
Confidence 344568999999999999875521127888888752 566677888 69999999987776654 444
No 53
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=91.04 E-value=0.93 Score=35.13 Aligned_cols=61 Identities=13% Similarity=0.225 Sum_probs=46.0
Q ss_pred HhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhh
Q psy17300 9 RAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQ 73 (152)
Q Consensus 9 ~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~ 73 (152)
..+.+..++++++++.|++|.-+ +++.+|.+.+ .+|.+..+.+ ..||+|.|..-+..+|..
T Consensus 195 ~~l~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~ 256 (325)
T 2q7v_A 195 ARAFANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELAT-DGVFIFIGHVPNTAFVKD 256 (325)
T ss_dssp HHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGTT
T ss_pred HHHHhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEc-CEEEEccCCCCChHHHhh
Confidence 33445579999999999998743 4677888875 3576677888 699999998877666643
No 54
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=90.97 E-value=0.39 Score=41.54 Aligned_cols=60 Identities=15% Similarity=0.321 Sum_probs=43.6
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc----CCCcE-------EEEEeCcEEEEccCCccCh
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN----PQGKT-------IKVNANREVVLAANSINSV 68 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~----~~g~~-------~~~~a~k~VIlaaGai~tP 68 (152)
+|.....+.+++|+.++.|++|..++ ++++++|.+.+ .+|.. ..++| +.||+|.|+-..-
T Consensus 149 ~L~~~a~~~Gv~i~~g~~v~~l~~~~-~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~A-d~VV~AdG~~S~v 219 (584)
T 2gmh_A 149 WMGEQAEALGVEVYPGYAAAEILFHE-DGSVKGIATNDVGIQKDGAPKTTFERGLELHA-KVTIFAEGCHGHL 219 (584)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEECT-TSSEEEEEECCEEECTTSCEEEEEECCCEEEC-SEEEECCCTTCHH
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEEcC-CCCEEEEEeCCccccCCCCcccccCCceEEEC-CEEEEeeCCCchH
Confidence 34333334589999999999998874 46788888763 34543 46888 7999999987653
No 55
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=90.94 E-value=0.27 Score=43.63 Aligned_cols=51 Identities=18% Similarity=0.332 Sum_probs=38.9
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.+|++++ ++.|+.|..+ ++++.||... +|. .+.| +.||+|+|+....+++
T Consensus 135 ~~~GVeI~-~~~Vt~L~~e--~g~V~GV~t~--dG~--~i~A-daVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 135 NQENLYIK-QEEVVDIIVK--NNQVVGVRTN--LGV--EYKT-KAVVVTTGTFLNGVIY 185 (637)
T ss_dssp TCTTEEEE-ESCEEEEEES--SSBEEEEEET--TSC--EEEC-SEEEECCTTCBTCEEE
T ss_pred hCCCCEEE-EeEEEEEEec--CCEEEEEEEC--CCc--EEEe-CEEEEccCCCccCcee
Confidence 34799994 7899999877 6788888874 453 5778 7999999997665543
No 56
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=90.93 E-value=0.5 Score=38.82 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=41.0
Q ss_pred hhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEE--EcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 6 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEF--RNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 6 ~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~--~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
.|+.....+-+.++..++.|++|..+.++++...+.+ .+..|.+..+.+ +.||+|+|+ +|+
T Consensus 131 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~-d~lVlAtG~--~p~ 193 (463)
T 3s5w_A 131 DYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTT-RALVVSPGG--TPR 193 (463)
T ss_dssp HHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEE-SEEEECCCC--EEC
T ss_pred HHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEe-CEEEECCCC--CCC
Confidence 3454444555688999999999987632355544444 333355667888 699999998 554
No 57
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=90.61 E-value=0.65 Score=39.33 Aligned_cols=67 Identities=16% Similarity=0.278 Sum_probs=46.7
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH-HHhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR-ILQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~-lLl~Sgi 76 (152)
++.....+.++++++++.|++|..++ ++++.++.+...+|. ..+.+ +.||+|+|..-+.. +|...|+
T Consensus 260 ~l~~~l~~~GV~i~~~~~V~~i~~~~-~~~v~~~~v~~~~G~-~~i~a-D~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 260 YVLDRMKEQGMEIISGSNVTRIEEDA-NGRVQAVVAMTPNGE-MRIET-DFVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEECT-TSBEEEEEEEETTEE-EEEEC-SCEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEEcC-CCceEEEEEEECCCc-EEEEc-CEEEECcCCccCCccCHHHcCC
Confidence 34444456789999999999997643 455655555534553 36778 69999999987776 6666665
No 58
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.51 E-value=0.45 Score=41.60 Aligned_cols=53 Identities=17% Similarity=0.150 Sum_probs=38.0
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
+.+++|++++.|++|..+ ++.+ .|.. .+|. .++| +.||+|+|+. ++.++...+
T Consensus 429 ~~Gv~i~~~t~V~~l~~~--~~~v-~V~t--~~G~--~i~A-d~VVlAtG~~-s~~l~~~~~ 481 (676)
T 3ps9_A 429 QQGLQIYYQYQLQNFSRK--DDCW-LLNF--AGDQ--QATH-SVVVLANGHQ-ISRFSQTST 481 (676)
T ss_dssp HTTCEEEESCCEEEEEEE--TTEE-EEEE--TTSC--EEEE-SEEEECCGGG-GGCSTTTTT
T ss_pred hCCCEEEeCCeeeEEEEe--CCeE-EEEE--CCCC--EEEC-CEEEECCCcc-hhccccccC
Confidence 467999999999999987 4442 3433 3454 3778 6899999987 666665544
No 59
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=89.99 E-value=0.42 Score=35.91 Aligned_cols=57 Identities=21% Similarity=0.332 Sum_probs=40.3
Q ss_pred hHHh-hhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 7 FLRA-IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 7 ~l~~-~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+|.. +.+.++++++ ++.|++|..+ ++++.+|... +|. .+++ +.||+|+|....++++
T Consensus 73 ~l~~~~~~~~gv~i~-~~~v~~i~~~--~~~v~~v~~~--~g~--~i~a-~~VV~A~G~~s~~~~~ 130 (232)
T 2cul_A 73 RAKYLLEGLRPLHLF-QATATGLLLE--GNRVVGVRTW--EGP--PARG-EKVVLAVGSFLGARLF 130 (232)
T ss_dssp HHHHHHHTCTTEEEE-ECCEEEEEEE--TTEEEEEEET--TSC--CEEC-SEEEECCTTCSSCEEE
T ss_pred HHHHHHHcCCCcEEE-EeEEEEEEEe--CCEEEEEEEC--CCC--EEEC-CEEEECCCCChhhcee
Confidence 3434 3333689999 6799999877 5677777653 453 4777 7999999997766643
No 60
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=89.70 E-value=0.25 Score=41.53 Aligned_cols=48 Identities=17% Similarity=0.196 Sum_probs=37.7
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~t 67 (152)
.+.+++++.++.| +|+.+ ++++.||.+.+.+| .+.+ +.||+|+|+...
T Consensus 130 ~~~gv~i~~~~~v-~l~~~--~~~v~Gv~v~~~~g---~~~a-~~VVlAtGg~~~ 177 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EIRVK--DGKVTGFVTEKRGL---VEDV-DKLVLATGGYSY 177 (472)
T ss_dssp HHTTCCEECCCEE-EEEEE--TTEEEEEEETTTEE---ECCC-SEEEECCCCCGG
T ss_pred HhCCCEEEECcEE-EEEEe--CCEEEEEEEEeCCC---eEEe-eeEEECCCCCcc
Confidence 4678999999999 99887 67899998864223 3556 799999998753
No 61
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=89.67 E-value=0.51 Score=41.04 Aligned_cols=53 Identities=19% Similarity=0.238 Sum_probs=40.6
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 64 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGa 64 (152)
|.....+.+++++.++.|+.|..+ ++.+.+|.+.+ +|....++| +.||.|.|.
T Consensus 134 L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~-~G~~~~i~A-dlVV~AdG~ 186 (591)
T 3i3l_A 134 LLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRR-GGESVTVES-DFVIDAGGS 186 (591)
T ss_dssp HHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEE-TTEEEEEEE-SEEEECCGG
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEec-CCceEEEEc-CEEEECCCC
Confidence 333334578999999999999876 45567888873 666678899 699999987
No 62
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=89.56 E-value=0.17 Score=43.96 Aligned_cols=56 Identities=25% Similarity=0.446 Sum_probs=41.2
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccCh--HHHhhCCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSV--RILQQSGV 76 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP--~lLl~Sgi 76 (152)
+.+++++.++.|++|..+ ++++.+|.+. +|. .+.| +.||+|.|.-... ++|...|+
T Consensus 232 ~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~--~G~--~i~A-d~VVlA~G~~s~~~~~~l~~~Gi 289 (549)
T 3nlc_A 232 ELGGEIRFSTRVDDLHME--DGQITGVTLS--NGE--EIKS-RHVVLAVGHSARDTFEMLHERGV 289 (549)
T ss_dssp HTTCEEESSCCEEEEEES--SSBEEEEEET--TSC--EEEC-SCEEECCCTTCHHHHHHHHHTTC
T ss_pred hcCCEEEeCCEEEEEEEe--CCEEEEEEEC--CCC--EEEC-CEEEECCCCChhhHHHHHHHcCC
Confidence 468999999999999877 5678888874 453 4777 6999999995532 34444454
No 63
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=89.54 E-value=1.6 Score=35.31 Aligned_cols=57 Identities=12% Similarity=0.102 Sum_probs=39.8
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCC-C-C--eEEEEEEEc----CCC------cEEEEEe--------------CcEEE
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDET-K-T--KVTGVEFRN----PQG------KTIKVNA--------------NREVV 59 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~-~-~--~~~gV~~~~----~~g------~~~~~~a--------------~k~VI 59 (152)
+..+.+.+|++++.++.|+.|+.+++ + + +++||.+.. .+| ....+.| .+.||
T Consensus 153 ~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV 232 (326)
T 2gjc_A 153 LSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVIL 232 (326)
T ss_dssp HHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEE
T ss_pred HHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEE
Confidence 33355568999999999999998742 1 4 899998752 222 3456777 36899
Q ss_pred EccCC
Q psy17300 60 LAANS 64 (152)
Q Consensus 60 laaGa 64 (152)
.|+|.
T Consensus 233 ~ATG~ 237 (326)
T 2gjc_A 233 STTGH 237 (326)
T ss_dssp ECCCC
T ss_pred ECcCC
Confidence 98884
No 64
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=89.53 E-value=0.72 Score=36.90 Aligned_cols=52 Identities=25% Similarity=0.318 Sum_probs=36.2
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
+.+++++.++.|++|..+ ++.+ .+...++ .++| +.||+|+|+. ++.++-..|
T Consensus 165 ~~Gv~i~~~~~V~~i~~~--~~~v---~v~t~~g---~i~a-~~VV~A~G~~-s~~l~~~~g 216 (397)
T 2oln_A 165 AAGATLRAGETVTELVPD--ADGV---SVTTDRG---TYRA-GKVVLACGPY-TNDLLEPLG 216 (397)
T ss_dssp HTTCEEEESCCEEEEEEE--TTEE---EEEESSC---EEEE-EEEEECCGGG-HHHHHGGGT
T ss_pred HcCCEEECCCEEEEEEEc--CCeE---EEEECCC---EEEc-CEEEEcCCcC-hHHHhhhcC
Confidence 457999999999999877 3433 3332333 4788 6899999985 455655444
No 65
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=89.41 E-value=0.38 Score=42.74 Aligned_cols=49 Identities=22% Similarity=0.356 Sum_probs=37.6
Q ss_pred CCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 15 NTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 15 ~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+|+++ .++.|+.|..+ ++++.+|... +| ..++| +.||+|+|+....+++
T Consensus 138 ~GV~I-~~~~V~~L~~e--~g~V~GV~t~--dG--~~I~A-d~VVLATGt~s~~~~i 186 (651)
T 3ces_A 138 PNLMI-FQQAVEDLIVE--NDRVVGAVTQ--MG--LKFRA-KAVVLTVGTFLDGKIH 186 (651)
T ss_dssp TTEEE-EECCEEEEEES--SSBEEEEEET--TS--EEEEE-EEEEECCSTTTCCEEE
T ss_pred CCCEE-EEEEEEEEEec--CCEEEEEEEC--CC--CEEEC-CEEEEcCCCCccCccc
Confidence 79999 46799999876 5778888764 45 35778 7999999997655443
No 66
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=89.30 E-value=0.84 Score=35.80 Aligned_cols=57 Identities=25% Similarity=0.299 Sum_probs=40.8
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccCh
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSV 68 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP 68 (152)
+|.......+.+++.++.|+.+..+ +++++++... .++....++| +.||-|.| .+|.
T Consensus 107 ~L~~~a~~~G~~~~~~~~v~~~~~~--~~~~~~v~~~-~~~~~~~~~a-~~vIgAdG-~~S~ 163 (397)
T 3oz2_A 107 HLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIR-HNNEIVDVRA-KMVIAADG-FESE 163 (397)
T ss_dssp HHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEE-ETTEEEEEEE-EEEEECCC-TTCH
T ss_pred HHHHHHHhcCcEEeeeeeeeeeeec--cceeeeeeec-ccccceEEEE-eEEEeCCc-cccH
Confidence 3433334568999999999999888 6788888877 4666778888 45555555 5554
No 67
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=89.22 E-value=0.67 Score=38.42 Aligned_cols=48 Identities=15% Similarity=0.226 Sum_probs=36.0
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
.+.++++++++.|++|..++ +. +.+...+| .++| +.||+|+|+...|+
T Consensus 143 ~~~Gv~i~~~~~V~~i~~~~--~~---~~V~~~~g---~i~a-d~VIlAtG~~S~p~ 190 (417)
T 3v76_A 143 KEAGVQLRLETSIGEVERTA--SG---FRVTTSAG---TVDA-ASLVVASGGKSIPK 190 (417)
T ss_dssp HHHTCEEECSCCEEEEEEET--TE---EEEEETTE---EEEE-SEEEECCCCSSCGG
T ss_pred HHCCCEEEECCEEEEEEEeC--CE---EEEEECCc---EEEe-eEEEECCCCccCCC
Confidence 34589999999999998773 32 33442344 6788 69999999998875
No 68
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=88.95 E-value=0.69 Score=41.48 Aligned_cols=55 Identities=25% Similarity=0.252 Sum_probs=41.7
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.+++++.++.|++|..+ ++++++|... +| .++| +.||+|+|+- ++.++...|+
T Consensus 162 ~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~--~G---~i~A-d~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 162 ESAGVTYRGSTTVTGIEQS--GGRVTGVQTA--DG---VIPA-DIVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHTTCEEECSCCEEEEEEE--TTEEEEEEET--TE---EEEC-SEEEECCGGG-HHHHHHTTTC
T ss_pred HHcCCEEECCceEEEEEEe--CCEEEEEEEC--Cc---EEEC-CEEEECCccc-hHHHHHHhCC
Confidence 3467999999999999887 5677777652 34 5888 6999999986 4777666554
No 69
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=88.80 E-value=0.43 Score=37.83 Aligned_cols=54 Identities=22% Similarity=0.241 Sum_probs=38.5
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.+++++.++.|++|..+ ++.+ +|.. .+| .+++ +.||+|+|+. ++.++...|+
T Consensus 175 ~~~g~~i~~~~~v~~i~~~--~~~~-~v~~--~~g---~~~a-~~vV~A~G~~-s~~l~~~~~~ 228 (382)
T 1ryi_A 175 KMLGAEIFEHTPVLHVERD--GEAL-FIKT--PSG---DVWA-NHVVVASGVW-SGMFFKQLGL 228 (382)
T ss_dssp HHTTCEEETTCCCCEEECS--SSSE-EEEE--TTE---EEEE-EEEEECCGGG-THHHHHHTTC
T ss_pred HHCCCEEEcCCcEEEEEEE--CCEE-EEEc--CCc---eEEc-CEEEECCChh-HHHHHHhcCC
Confidence 3457999999999999766 3444 4543 233 5778 6999999986 6667665554
No 70
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=88.78 E-value=1.2 Score=34.27 Aligned_cols=61 Identities=8% Similarity=0.135 Sum_probs=46.9
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
.+.++++++++.|.+|.-+ ++ ..+|.+.+ .+++...+.+ ..||+|.|..-++.+|..+|+.
T Consensus 200 ~~~gv~~~~~~~v~~i~~~--~~-~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~~~~~~~~ 261 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGE--DK-IEQLVLEEVKGDRKEILEI-DDLIVNYGFVSSLGPIKNWGLD 261 (332)
T ss_dssp HHSSCEEETTEEEEEEECS--SS-CCEEEEEETTSCCEEEEEC-SEEEECCCEECCCGGGGGSSCC
T ss_pred hcCCeEEEeCceeeEEecC--Cc-eEEEEEEecCCCceEEEEC-CEEEEeeccCCCchHHhhcCcc
Confidence 3568999999999998654 33 66788876 3456677888 6999999988877787777654
No 71
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=88.70 E-value=0.67 Score=38.67 Aligned_cols=68 Identities=15% Similarity=0.244 Sum_probs=45.3
Q ss_pred hHHhhhcCCCcE--EEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 7 FLRAIKDKNTVQ--VSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~--l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
|+.....+-+++ ++.++.|++|..+.+ .....|.+.+ .+|....+.+ +.||+|.|....|++....|+
T Consensus 106 ~l~~~~~~~gv~~~i~~~~~V~~v~~~~~-~~~~~V~~~~~~~g~~~~~~~-d~VVvAtG~~s~p~~p~ipG~ 176 (464)
T 2xve_A 106 YIKGRVEKAGVRKYIRFNTAVRHVEFNED-SQTFTVTVQDHTTDTIYSEEF-DYVVCCTGHFSTPYVPEFEGF 176 (464)
T ss_dssp HHHHHHHHHTCGGGEECSEEEEEEEEETT-TTEEEEEEEETTTTEEEEEEE-SEEEECCCSSSSBCCCCCBTT
T ss_pred HHHHHHHHcCCcceEEeCCEEEEEEEcCC-CCcEEEEEEEcCCCceEEEEc-CEEEECCCCCCCCccCCCCCc
Confidence 444433334566 889999999988742 2234566654 2455566777 699999999888887654444
No 72
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=88.44 E-value=2 Score=33.20 Aligned_cols=65 Identities=15% Similarity=0.189 Sum_probs=47.0
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
+.....+.++++++++.|.+|.-+ +++.+|.+.+. +|....+.+ ..||+|.|..-+..+|..+|+
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEV-DAVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEEC-SEEEECCCEEEECGGGGGSCC
T ss_pred HHhccccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEec-CEEEEeecCCCCchHhhhcce
Confidence 334345678999999999998653 45677888743 566667888 699999998766666665554
No 73
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=88.10 E-value=0.36 Score=37.49 Aligned_cols=62 Identities=15% Similarity=0.154 Sum_probs=42.1
Q ss_pred hhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 6 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 6 ~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
.|+.....+.+++++.++.|++|..+ ++...+ +...++ .+.+ +.||+|+|+...|.+....|
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~--v~~~~g---~~~~-d~vV~AtG~~~~~~~~~~~g 141 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHF--GERLRV--VARDGR---QWLA-RAVISATGTWGEAYTPEYQG 141 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEE--TTEEEE--EETTSC---EEEE-EEEEECCCSGGGBCCCCCTT
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEEC--CCcEEE--EEeCCC---EEEe-CEEEECCCCCCCCCCCCCCC
Confidence 45555445668899999999999877 444332 332334 5677 69999999877776654444
No 74
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=87.84 E-value=0.62 Score=37.77 Aligned_cols=50 Identities=12% Similarity=0.205 Sum_probs=38.2
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
.+.+.+|++++.|++|..+ ++++ | . .+|. .+.| +.||+|+|+-..++||-
T Consensus 200 ~~~G~~i~~~~~V~~i~~~--~~~v--V--~-~~g~--~~~a-d~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 200 MENKGKILTRKEVVEINIE--EKKV--Y--T-RDNE--EYSF-DVAISNVGVRETVKLIG 249 (421)
T ss_dssp HTTTCEEESSCCEEEEETT--TTEE--E--E-TTCC--EEEC-SEEEECSCHHHHHHHHC
T ss_pred HHCCCEEEcCCeEEEEEEE--CCEE--E--E-eCCc--EEEe-CEEEECCCHHHHHHhcC
Confidence 3567899999999999866 5555 3 3 4554 4677 69999999998888764
No 75
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=87.34 E-value=1.1 Score=37.76 Aligned_cols=63 Identities=19% Similarity=0.249 Sum_probs=44.5
Q ss_pred hhhHHhhhcCCCcEEEcCcEEEEEEEeCCCC-----eEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHH
Q psy17300 5 SIFLRAIKDKNTVQVSKNSEVTKLCFDETKT-----KVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 5 ~~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~-----~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~l 70 (152)
..||.....+-+..|..++.|++|..++.+. ...-|...+ .+|....+.| +.||+|.|. .|.+
T Consensus 148 ~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~a-r~vVlatG~--~P~i 216 (501)
T 4b63_A 148 EDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRT-RKVVIAIGG--TAKM 216 (501)
T ss_dssp HHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEE-EEEEECCCC--EECC
T ss_pred HHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEe-CEEEECcCC--CCCC
Confidence 4577776655556799999999998865221 245666665 3577778888 799999994 4543
No 76
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=87.15 E-value=2.9 Score=34.13 Aligned_cols=50 Identities=12% Similarity=0.070 Sum_probs=39.0
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCcEEEEEeCcEEEEccCCccC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~~~~~~a~k~VIlaaGai~t 67 (152)
..++++++++.|+++..+ ++. ..|.+.+. +|....+.+ ..||+|.|..-+
T Consensus 328 ~~~v~i~~~~~v~~v~~~--~~~-~~v~~~~~~~g~~~~~~~-D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 328 IPRHAFRCMTTVERATAT--AQG-IELALRDAGSGELSVETY-DAVILATGYERQ 378 (463)
T ss_dssp CCCSEEETTEEEEEEEEE--TTE-EEEEEEETTTCCEEEEEE-SEEEECCCEECC
T ss_pred CCCeEEEeCCEEEEEEec--CCE-EEEEEEEcCCCCeEEEEC-CEEEEeeCCCCC
Confidence 478999999999999766 333 45666653 577777888 599999998877
No 77
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=87.03 E-value=0.24 Score=41.89 Aligned_cols=62 Identities=11% Similarity=-0.071 Sum_probs=42.6
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCcEEEEEeCcEEEEccCCccChHH
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~~~~~~a~k~VIlaaGai~tP~l 70 (152)
|.....+.+++|+.++.|++|..+++++....|.+.+. +|....+++ +.||+|.|+-..++-
T Consensus 172 L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~a-d~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 172 LLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEF-DVLISAAGGKFVPEG 234 (497)
T ss_dssp HHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCB-SEEEECCCTTCCCTT
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEc-CEEEECCCCCccccc
Confidence 33333347899999999999976521233456777643 553345777 799999999887763
No 78
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=86.74 E-value=1.5 Score=36.33 Aligned_cols=62 Identities=26% Similarity=0.337 Sum_probs=44.3
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.....+.++++++++.|.+|.-+ +++++ |.+. +|+ .+.+ ..||+|+|..-++.++..+|+
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~-v~~~--~g~--~i~a-D~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEGE--NGKVA-RVIT--DKR--TLDA-DLVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEES--SSBEE-EEEE--SSC--EEEC-SEEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEcc--CCeEE-EEEe--CCC--EEEc-CEEEECCCCCcCHHHHHhCCc
Confidence 3444445678999999999999764 44544 5554 454 5677 699999999877777766665
No 79
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=86.52 E-value=0.84 Score=40.04 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=37.3
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
+.+++|++++.|++|..++ +. ..|.. .+|. ..++| +.||+|+|+. ++.++...+
T Consensus 424 ~~Gv~i~~~t~V~~l~~~~--~~-v~V~t--~~G~-~~i~A-d~VVlAtG~~-s~~l~~~~~ 477 (689)
T 3pvc_A 424 QNGMTCHYQHELQRLKRID--SQ-WQLTF--GQSQ-AAKHH-ATVILATGHR-LPEWEQTHH 477 (689)
T ss_dssp HTTCEEEESCCEEEEEECS--SS-EEEEE--C-CC-CCEEE-SEEEECCGGG-TTCSTTTTT
T ss_pred hCCCEEEeCCeEeEEEEeC--Ce-EEEEe--CCCc-EEEEC-CEEEECCCcc-hhccccccC
Confidence 4679999999999998874 33 23433 3443 14677 6999999987 666665444
No 80
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=85.95 E-value=0.85 Score=38.86 Aligned_cols=47 Identities=21% Similarity=0.338 Sum_probs=35.3
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCc
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 65 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai 65 (152)
...+.++++++.|++|..++ +++++||... +|. .++| +.||++++.+
T Consensus 267 ~~~Gg~i~l~t~V~~I~~d~-~g~v~gV~~~--~G~--~i~A-d~VI~a~~~~ 313 (475)
T 3p1w_A 267 AINGGTFMLNKNVVDFVFDD-DNKVCGIKSS--DGE--IAYC-DKVICDPSYV 313 (475)
T ss_dssp HHC--CEESSCCEEEEEECT-TSCEEEEEET--TSC--EEEE-EEEEECGGGC
T ss_pred HHcCCEEEeCCeEEEEEEec-CCeEEEEEEC--CCc--EEEC-CEEEECCCcc
Confidence 35678999999999999843 6789999874 454 3677 6899998876
No 81
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=85.37 E-value=3.5 Score=34.44 Aligned_cols=59 Identities=14% Similarity=0.183 Sum_probs=41.6
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH--HhhCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 76 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l--Ll~Sgi 76 (152)
.+. +++++++.|.++..+ ++.+. |.+.+.+|++..+.+ ..||+|.|..-+..+ |...|+
T Consensus 226 ~~~-V~i~~~~~v~~i~~~--~~~v~-v~~~~~~G~~~~i~~-D~Vi~a~G~~p~~~~l~l~~~gl 286 (492)
T 3ic9_A 226 NEE-FYFDAKARVISTIEK--EDAVE-VIYFDKSGQKTTESF-QYVLAATGRKANVDKLGLENTSI 286 (492)
T ss_dssp HTT-SEEETTCEEEEEEEC--SSSEE-EEEECTTCCEEEEEE-SEEEECSCCEESCSSSCGGGSCC
T ss_pred hhC-cEEEECCEEEEEEEc--CCEEE-EEEEeCCCceEEEEC-CEEEEeeCCccCCCCCChhhcCC
Confidence 344 999999999999765 33333 555544676677888 599999998877666 444444
No 82
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=85.06 E-value=2.5 Score=35.59 Aligned_cols=54 Identities=30% Similarity=0.311 Sum_probs=38.6
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
+.+++|..++.|+.+..++ +.++ |.+.+.+| ++++++ +.||.|.|+-...|=++
T Consensus 118 ~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g-~~~~~a-~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 118 GLGADIRRGHEVLSLTDDG--AGVT-VEVRGPEG-KHTLRA-AYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp HTTCEEEETCEEEEEEEET--TEEE-EEEEETTE-EEEEEE-SEEEECCCTTCHHHHHT
T ss_pred HCCCEEECCcEEEEEEEcC--CeEE-EEEEcCCC-CEEEEe-CEEEECCCcchHHHHHc
Confidence 3479999999999998873 4444 66665444 567888 68888888865544443
No 83
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=84.76 E-value=1.3 Score=34.92 Aligned_cols=53 Identities=11% Similarity=0.281 Sum_probs=35.7
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
.+.+++++.++.|++|..+. +. +.+...++ .++| +.||+|+|+- ++.++-..|
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~--~~---~~v~~~~g---~~~a-~~vV~A~G~~-~~~l~~~~g 213 (389)
T 2gf3_A 161 EARGAKVLTHTRVEDFDISP--DS---VKIETANG---SYTA-DKLIVSMGAW-NSKLLSKLN 213 (389)
T ss_dssp HHTTCEEECSCCEEEEEECS--SC---EEEEETTE---EEEE-EEEEECCGGG-HHHHGGGGT
T ss_pred HHCCCEEEcCcEEEEEEecC--Ce---EEEEeCCC---EEEe-CEEEEecCcc-HHHHhhhhc
Confidence 34589999999999998763 32 23332333 4788 6999999984 556654433
No 84
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=84.24 E-value=2.7 Score=34.68 Aligned_cols=66 Identities=12% Similarity=0.119 Sum_probs=42.8
Q ss_pred hHHhhh-cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH--HhhCCC
Q psy17300 7 FLRAIK-DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 76 (152)
Q Consensus 7 ~l~~~~-~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l--Ll~Sgi 76 (152)
++.... .+.++++++++.|.+|.-+. +. ..|.+.+.+|....+.+ ..||+|+|..-+..+ |...|+
T Consensus 220 ~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 220 ALVGALAKNEKMKFMTSTKVVGGTNNG--DS-VSLEVEGKNGKRETVTC-EALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HHHHHHHHHTCCEEECSCEEEEEEECS--SS-EEEEEECC---EEEEEE-SEEEECSCEEECCTTSCHHHHTC
T ss_pred HHHHHHhhcCCcEEEeCCEEEEEEEcC--Ce-EEEEEEcCCCceEEEEC-CEEEECCCcccCCCCCCchhcCC
Confidence 344444 56789999999999987652 22 34555432454456888 699999998877766 444444
No 85
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=83.96 E-value=2.9 Score=35.16 Aligned_cols=54 Identities=22% Similarity=0.272 Sum_probs=37.7
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
+.+++|+.++.|+.+..++ +.++ |.+.+.+| ++++++ +.||.|.|+-...|=++
T Consensus 119 ~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g-~~~~~a-~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 119 GRGAELLRGHTVRALTDEG--DHVV-VEVEGPDG-PRSLTT-RYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp HTTCEEEESCEEEEEEECS--SCEE-EEEECSSC-EEEEEE-EEEEECCCTTCHHHHHT
T ss_pred hCCCEEEcCCEEEEEEEeC--CEEE-EEEEcCCC-cEEEEe-CEEEEccCcccHHHHHc
Confidence 3479999999999998774 3443 66665445 567888 68888888765444333
No 86
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=83.66 E-value=1.7 Score=34.19 Aligned_cols=49 Identities=18% Similarity=0.279 Sum_probs=33.9
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
.+.+++++.++.|++|..+. +. +.+...+| .++| +.||+|+|+. ++.++
T Consensus 160 ~~~G~~i~~~~~V~~i~~~~--~~---~~v~~~~g---~~~a-~~vV~a~G~~-s~~l~ 208 (372)
T 2uzz_A 160 KEAGCAQLFNCPVTAIRHDD--DG---VTIETADG---EYQA-KKAIVCAGTW-VKDLL 208 (372)
T ss_dssp HHTTCEEECSCCEEEEEECS--SS---EEEEESSC---EEEE-EEEEECCGGG-GGGTS
T ss_pred HHCCCEEEcCCEEEEEEEcC--CE---EEEEECCC---eEEc-CEEEEcCCcc-HHhhc
Confidence 34679999999999998763 33 22332344 3778 6999999975 45554
No 87
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=83.42 E-value=2.8 Score=34.30 Aligned_cols=62 Identities=13% Similarity=0.193 Sum_probs=44.4
Q ss_pred hhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 6 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 6 ~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.++.....+.++++++++.|++|. .+ ++.+.+.+|...++.+ ..+|+++|.-.+ .++..|+.
T Consensus 204 ~~l~~~l~~~GV~~~~~~~v~~v~----~~---~~~~~~~~g~~~~i~~-d~vi~~~G~~~~-~~~~~~~~ 265 (430)
T 3hyw_A 204 RLVEDLFAERNIDWIANVAVKAIE----PD---KVIYEDLNGNTHEVPA-KFTMFMPSFQGP-EVVASAGD 265 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEC----SS---EEEEECTTSCEEEEEC-SEEEEECEEECC-HHHHTTCT
T ss_pred HHHHHHHHhCCeEEEeCceEEEEe----CC---ceEEEeeCCCceEeec-ceEEEeccCCCc-hHHHhccc
Confidence 345555556789999999999973 22 3556666777788888 588888886654 56666653
No 88
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=83.10 E-value=4 Score=33.87 Aligned_cols=65 Identities=22% Similarity=0.285 Sum_probs=44.4
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCC-CcEEEEEeCcEEEEccCCccChHH--HhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQ-GKTIKVNANREVVLAANSINSVRI--LQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~-g~~~~~~a~k~VIlaaGai~tP~l--Ll~Sgi 76 (152)
+.....+.++++++++.|.++.-+ ++. ..|.+.+.+ |....+.+ ..||+|.|..-+..+ |...|+
T Consensus 245 l~~~l~~~gV~v~~~~~v~~i~~~--~~~-~~v~~~~~~~g~~~~i~~-D~Vi~a~G~~p~~~~l~l~~~g~ 312 (491)
T 3urh_A 245 LQRMLTKQGIDFKLGAKVTGAVKS--GDG-AKVTFEPVKGGEATTLDA-EVVLIATGRKPSTDGLGLAKAGV 312 (491)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEE--TTE-EEEEEEETTSCCCEEEEE-SEEEECCCCEECCTTSCHHHHTC
T ss_pred HHHHHHhCCCEEEECCeEEEEEEe--CCE-EEEEEEecCCCceEEEEc-CEEEEeeCCccCCCccCchhcCc
Confidence 334445678999999999999766 333 346666433 65567888 699999998766655 444444
No 89
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=83.05 E-value=3 Score=34.22 Aligned_cols=65 Identities=11% Similarity=0.024 Sum_probs=42.1
Q ss_pred hhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCc-EEEEEeCcEEEEccCCccChHHHhhC
Q psy17300 6 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGK-TIKVNANREVVLAANSINSVRILQQS 74 (152)
Q Consensus 6 ~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~-~~~~~a~k~VIlaaGai~tP~lLl~S 74 (152)
.||.....+-+.+++.++.|++|..+ ++. ..|.+.+ .+|. ...+.+ +.||+|.|....|++.-..
T Consensus 119 ~~l~~~~~~~~~~i~~~t~V~~v~~~--~~~-~~V~~~~~~~G~~~~~~~~-d~VVvAtG~~s~p~~p~i~ 185 (447)
T 2gv8_A 119 EYQRIYAQPLLPFIKLATDVLDIEKK--DGS-WVVTYKGTKAGSPISKDIF-DAVSICNGHYEVPYIPNIK 185 (447)
T ss_dssp HHHHHHHGGGGGGEECSEEEEEEEEE--TTE-EEEEEEESSTTCCEEEEEE-SEEEECCCSSSSBCBCCCB
T ss_pred HHHHHHHHHhhCeEEeCCEEEEEEeC--CCe-EEEEEeecCCCCeeEEEEe-CEEEECCCCCCCCCCCCCC
Confidence 34444333335578899999999766 332 3455554 2355 456777 6999999998888765333
No 90
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=82.96 E-value=2.6 Score=37.35 Aligned_cols=49 Identities=16% Similarity=0.309 Sum_probs=36.8
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
+.+|++++ +..|+.|..+ ++++.||... +|. .+.| +.||+|+|+.....
T Consensus 129 ~~~GV~I~-~~~V~~L~~d--~g~V~GV~t~--~G~--~i~A-d~VVLATG~~s~~~ 177 (641)
T 3cp8_A 129 HEPNIDLL-QDTVIGVSAN--SGKFSSVTVR--SGR--AIQA-KAAILACGTFLNGL 177 (641)
T ss_dssp TCTTEEEE-ECCEEEEEEE--TTEEEEEEET--TSC--EEEE-EEEEECCTTCBTCE
T ss_pred hCCCCEEE-eeEEEEEEec--CCEEEEEEEC--CCc--EEEe-CEEEECcCCCCCcc
Confidence 34799996 4589998877 6788888764 554 5778 79999999875543
No 91
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=82.96 E-value=1.6 Score=35.87 Aligned_cols=65 Identities=17% Similarity=0.288 Sum_probs=45.9
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
+.....+.++++++++.|.+|.-+.+++++.+|.+. +|. .+.+ ..||+|.|..-+..+|..+|+.
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~--~G~--~i~~-D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCE--DGT--RLPA-DLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEET--TSC--EEEC-SEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeC--CCC--EEEc-CEEEECCCCCcCcchhhccCCC
Confidence 333344568999999999998752114567777764 453 4667 6999999988777787777763
No 92
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=82.75 E-value=3.2 Score=34.87 Aligned_cols=50 Identities=12% Similarity=0.128 Sum_probs=34.7
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeE--EEEEEEcCCCcEEEEEeCcEEEEccCCcc
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKV--TGVEFRNPQGKTIKVNANREVVLAANSIN 66 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~--~gV~~~~~~g~~~~~~a~k~VIlaaGai~ 66 (152)
..+++++.++.|+.+..++ ++++ ..|.+.+.++ ..+++| +.||.|.|+-.
T Consensus 132 ~~gv~i~~~~~v~~i~~~~-~~~~~~v~v~~~~~~~-~~~i~a-~~vV~AdG~~S 183 (535)
T 3ihg_A 132 KHGGAIRFGTRLLSFRQHD-DDAGAGVTARLAGPDG-EYDLRA-GYLVGADGNRS 183 (535)
T ss_dssp HTTCEEESSCEEEEEEEEC-GGGCSEEEEEEEETTE-EEEEEE-EEEEECCCTTC
T ss_pred hCCCEEEeCCEEEEEEECC-CCccccEEEEEEcCCC-eEEEEe-CEEEECCCCcc
Confidence 3489999999999998874 2222 2244553333 567888 68888888765
No 93
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=82.48 E-value=2.8 Score=34.64 Aligned_cols=59 Identities=17% Similarity=0.198 Sum_probs=40.8
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.....+.++++++++.|.++..+ ++.+ .|.+.+.+| ...+.+ ..||+|.|..-+...|
T Consensus 227 l~~~l~~~Gv~v~~~~~v~~i~~~--~~~~-~v~~~~~~g-~~~~~~-D~vi~a~G~~p~~~~l 285 (476)
T 3lad_A 227 AQKILTKQGLKILLGARVTGTEVK--NKQV-TVKFVDAEG-EKSQAF-DKLIVAVGRRPVTTDL 285 (476)
T ss_dssp HHHHHHHTTEEEEETCEEEEEEEC--SSCE-EEEEESSSE-EEEEEE-SEEEECSCEEECCTTC
T ss_pred HHHHHHhCCCEEEECCEEEEEEEc--CCEE-EEEEEeCCC-cEEEEC-CEEEEeeCCcccCCCC
Confidence 333445678999999999999765 3333 366664344 456788 5999999987665543
No 94
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=82.21 E-value=2.7 Score=33.61 Aligned_cols=49 Identities=24% Similarity=0.284 Sum_probs=34.1
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEE-EEEEEcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVT-GVEFRNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~-gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
.++++++.++.|++|..++ +.++ .|.+ .+|. .+++ +.||.|.|.-...+
T Consensus 120 ~~gv~i~~~~~v~~i~~~~--~~v~g~v~~--~~g~--~~~a-d~vV~AdG~~s~vr 169 (399)
T 2x3n_A 120 EATVEMLFETRIEAVQRDE--RHAIDQVRL--NDGR--VLRP-RVVVGADGIASYVR 169 (399)
T ss_dssp CTTEEEECSCCEEEEEECT--TSCEEEEEE--TTSC--EEEE-EEEEECCCTTCHHH
T ss_pred cCCcEEEcCCEEEEEEEcC--CceEEEEEE--CCCC--EEEC-CEEEECCCCChHHH
Confidence 3489999999999998763 3443 4444 3554 5777 68888888755443
No 95
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=81.71 E-value=2.5 Score=34.62 Aligned_cols=50 Identities=14% Similarity=0.200 Sum_probs=35.3
Q ss_pred cCCCcEEEcCcEEEEEEEeCC--CCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDET--KTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~--~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
.+.++++++++.|++|..+++ ++. +.+...++ .++| +.||+|+|+...|+
T Consensus 120 ~~~Gv~i~~~~~v~~i~~~~~g~~~~---~~v~~~~g---~i~a-d~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 120 DKYGAKILLRSEVSQVERIQNDEKVR---FVLQVNST---QWQC-KNLIVATGGLSMPG 171 (401)
T ss_dssp HHHTCEEECSCCEEEEEECCSCSSCC---EEEEETTE---EEEE-SEEEECCCCSSCGG
T ss_pred HHCCCEEEeCCEEEEEEcccCcCCCe---EEEEECCC---EEEC-CEEEECCCCccCCC
Confidence 456899999999999986521 122 23332333 5788 79999999999885
No 96
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=81.17 E-value=3.9 Score=33.89 Aligned_cols=62 Identities=15% Similarity=0.121 Sum_probs=43.7
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
++.....+.++++++++.|.+|.-++ ++. ..|.+.+. ++....+.+ ..||+|.|..-+..+|
T Consensus 232 ~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~-~~v~~~~~~~~~~~~~~~-D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 232 LVAASMEERGIPFLRKTVPLSVEKQD-DGK-LLVKYKNVETGEESEDVY-DTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHHHHHHTTCCEEETEEEEEEEECT-TSC-EEEEEEETTTCCEEEEEE-SEEEECSCEEECCGGG
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEcC-CCc-EEEEEecCCCCceeEEEc-CEEEECcccccCcCcC
Confidence 33344456789999999999997653 333 34777653 355667888 5999999987766665
No 97
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=81.10 E-value=1.3 Score=38.01 Aligned_cols=65 Identities=18% Similarity=0.273 Sum_probs=44.1
Q ss_pred hhHHhhhcCCCc--EEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 6 IFLRAIKDKNTV--QVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 6 ~~l~~~~~~~nl--~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.|+.....+-++ ++..++.|+++.+++++ ....|.. .+|. .+.+ +.+|+|.|+...|++.-.-|+
T Consensus 91 ~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~-~~~~V~~--~~G~--~i~a-d~lV~AtG~~s~p~~p~ipG~ 157 (540)
T 3gwf_A 91 EYLEDVVDRFDLRRHFKFGTEVTSALYLDDE-NLWEVTT--DHGE--VYRA-KYVVNAVGLLSAINFPNLPGL 157 (540)
T ss_dssp HHHHHHHHHTTCGGGEEESCCEEEEEEETTT-TEEEEEE--TTSC--EEEE-EEEEECCCSCCSBCCCCCTTG
T ss_pred HHHHHHHHHcCCcceeEeccEEEEEEEeCCC-CEEEEEE--cCCC--EEEe-CEEEECCcccccCCCCCCCCc
Confidence 455554445566 89999999999988532 2333444 3554 4667 699999999888887655443
No 98
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=81.00 E-value=5.5 Score=31.80 Aligned_cols=63 Identities=13% Similarity=0.067 Sum_probs=43.9
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
++.....+.++++++++.|++|..+ ++. ..|.+ .+|. .+.+ +.||+|+|..-+..+|..+|+.
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~--~~g~--~i~~-d~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKA--GEG-LEAHL--SDGE--VIPC-DLVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEE--TTE-EEEEE--TTSC--EEEE-SEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEec--CCE-EEEEE--CCCC--EEEC-CEEEECcCCCcCHHHHHHCCCC
Confidence 3444445678999999999999765 332 23444 3553 4677 6999999988777777777663
No 99
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=81.00 E-value=1.3 Score=36.05 Aligned_cols=63 Identities=17% Similarity=0.268 Sum_probs=46.1
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
++.....+.++++++++.|.+|.-+ + ++.+|.+. +|+ .+.+ ..||+|.|..-+..+|..+|+.
T Consensus 190 ~l~~~l~~~GV~i~~~~~v~~i~~~--~-~~~~v~~~--dg~--~i~a-D~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 190 WLRGLLTELGVQVELGTGVVGFSGE--G-QLEQVMAS--DGR--SFVA-DSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEECS--S-SCCEEEET--TSC--EEEC-SEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEecc--C-cEEEEEEC--CCC--EEEc-CEEEEeeCCeecHHHHHhCCCc
Confidence 3444445678999999999998643 2 45567664 454 4667 6999999999888888877764
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=80.61 E-value=2.8 Score=29.54 Aligned_cols=58 Identities=16% Similarity=0.101 Sum_probs=37.3
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
++.....+.+++++.+ .|+++..+. +. +.+...+| .+.+ +.||+|+|.- |.++...|+
T Consensus 61 ~l~~~~~~~gv~v~~~-~v~~i~~~~--~~---~~v~~~~g---~i~a-d~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 61 RLEAHARRYGAEVRPG-VVKGVRDMG--GV---FEVETEEG---VEKA-ERLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHHHTTCEEEEC-CCCEEEECS--SS---EEEECSSC---EEEE-EEEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHHHcCCEEEeC-EEEEEEEcC--CE---EEEEECCC---EEEE-CEEEECCCCC--CCccccCCC
Confidence 3444344567999999 999987653 22 23332344 5777 6999999975 555555554
No 101
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=80.36 E-value=3.9 Score=34.25 Aligned_cols=61 Identities=20% Similarity=0.278 Sum_probs=43.9
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
+.....+.++++++++.|++|.-+ ++.+ .|.+ .+|. .+.+ ..||+|+|..-+..++..+|+
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~~--~~~~-~v~l--~dG~--~i~a-D~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGVS--SGKL-LIKL--KDGR--KVET-DHIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEEE--TTEE-EEEE--TTSC--EEEE-SEEEECCCEEECCTTHHHHTC
T ss_pred HHHHHHhcCCEEEeCCEEEEEEec--CCeE-EEEE--CCCC--EEEC-CEEEECCCCCccHHHHHHcCC
Confidence 333445678999999999998765 3443 4544 3564 4677 699999999887777777765
No 102
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=80.00 E-value=5.6 Score=32.85 Aligned_cols=60 Identities=17% Similarity=0.175 Sum_probs=40.9
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEE-cCCCcEEEEEeCcEEEEccCCccChHH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFR-NPQGKTIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~-~~~g~~~~~~a~k~VIlaaGai~tP~l 70 (152)
++.....+.++++++++.|++|.-+ ++. ..|.+. +..|++..+.+ ..||+|.|..-+..+
T Consensus 215 ~l~~~l~~~gV~i~~~~~v~~i~~~--~~~-~~v~~~~~~~g~~~~i~~-D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 215 LLRRALEKEGIRVRTKTKAVGYEKK--KDG-LHVRLEPAEGGEGEEVVV-DKVLVAVGRKPRTEG 275 (464)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEE--TTE-EEEEEEETTCCSCEEEEE-SEEEECSCEEESCTT
T ss_pred HHHHHHHhcCCEEEcCCEEEEEEEe--CCE-EEEEEeecCCCceeEEEc-CEEEECCCcccCCCC
Confidence 3334445678999999999999765 333 335554 22266556788 699999998766655
No 103
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=79.13 E-value=3.8 Score=35.58 Aligned_cols=61 Identities=18% Similarity=0.167 Sum_probs=41.7
Q ss_pred hhcCC-CcEEEcCcEEEEEEEeCC-CCeEEEEEEEc----CCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 11 IKDKN-TVQVSKNSEVTKLCFDET-KTKVTGVEFRN----PQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 11 ~~~~~-nl~l~~~~~V~ri~~~~~-~~~~~gV~~~~----~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
+.+.+ +++|+.++.|+.+..+++ ++..+.|.+.+ .+|...+++| +.||.|.|+-...|-++
T Consensus 151 a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a-~~vVgADG~~S~vR~~l 217 (639)
T 2dkh_A 151 MRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQA-RYVVGCDGARSNVRRAI 217 (639)
T ss_dssp HHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEE-EEEEECCCTTCHHHHHT
T ss_pred HHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEe-CEEEECCCcchHHHHHh
Confidence 34444 669999999999988742 12234566664 3576678888 68888888866555444
No 104
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=78.73 E-value=6.2 Score=32.49 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=43.6
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChH--HHhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVR--ILQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~--lLl~Sgi 76 (152)
++.....+.++++++++.|++|.-++++. ...|.+.+ .+|....+.+ ..||+|.|..-+.. +|..+|+
T Consensus 229 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~l~l~~~g~ 299 (478)
T 1v59_A 229 ATQKFLKKQGLDFKLSTKVISAKRNDDKN-VVEIVVEDTKTNKQENLEA-EVLLVAVGRRPYIAGLGAEKIGL 299 (478)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEETTTT-EEEEEEEETTTTEEEEEEE-SEEEECSCEEECCTTSCTTTTTC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEecCCC-eEEEEEEEcCCCCceEEEC-CEEEECCCCCcCCCCCCchhcCc
Confidence 34444456789999999999997621133 34566653 2344456778 69999999876665 3444443
No 105
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=77.89 E-value=1.4 Score=37.75 Aligned_cols=65 Identities=23% Similarity=0.337 Sum_probs=43.7
Q ss_pred hhHHhhhcCCCc--EEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 6 IFLRAIKDKNTV--QVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 6 ~~l~~~~~~~nl--~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.|+.....+-++ ++..++.|+++.+++++ ....|.. .+|. ++.+ +.||+|.|....|++.-..|+
T Consensus 103 ~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~-~~w~V~~--~~G~--~i~a-d~lV~AtG~~s~p~~p~ipG~ 169 (549)
T 4ap3_A 103 AYLEHVADRFDLRRDIRFDTRVTSAVLDEEG-LRWTVRT--DRGD--EVSA-RFLVVAAGPLSNANTPAFDGL 169 (549)
T ss_dssp HHHHHHHHHTTCGGGEECSCCEEEEEEETTT-TEEEEEE--TTCC--EEEE-EEEEECCCSEEECCCCCCTTG
T ss_pred HHHHHHHHHcCCCccEEECCEEEEEEEcCCC-CEEEEEE--CCCC--EEEe-CEEEECcCCCCCCCCCCCCCc
Confidence 455554444555 78999999999988532 2333443 3564 3667 699999998888877655554
No 106
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=76.82 E-value=6.9 Score=32.46 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=42.6
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCC-CcEEEEEeCcEEEEccCCccChHHH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQ-GKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~-g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
++.....+.++++++++.|.+|.-.+ ++. ..|.+.+.+ |++..+.+ ..||+|.|..-+..+|
T Consensus 230 ~l~~~l~~~gv~~~~~~~v~~i~~~~-~~~-~~v~~~~~~~g~~~~~~~-D~vi~a~G~~p~~~~l 292 (488)
T 3dgz_A 230 LVTEHMESHGTQFLKGCVPSHIKKLP-TNQ-LQVTWEDHASGKEDTGTF-DTVLWAIGRVPETRTL 292 (488)
T ss_dssp HHHHHHHHTTCEEEETEEEEEEEECT-TSC-EEEEEEETTTTEEEEEEE-SEEEECSCEEESCGGG
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEcC-CCc-EEEEEEeCCCCeeEEEEC-CEEEEcccCCcccCcC
Confidence 33344456789999999999987543 232 346666433 55566788 5999999988766664
No 107
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=76.52 E-value=4.1 Score=32.35 Aligned_cols=54 Identities=9% Similarity=0.022 Sum_probs=37.8
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.+++++.++.|+++..++ ++ ...|.+. .+|.+.++++ +.||.|.|.-...|=+
T Consensus 115 ~~g~~i~~~~~v~~i~~~~-~~-~~~v~~~-~~g~~~~~~a-~~vV~AdG~~S~vr~~ 168 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQ-GE-RPYVTFE-RDGERLRLDC-DYIAGCDGFHGISRQS 168 (394)
T ss_dssp HTTCEEESSCEEEEEECTT-SS-SCEEEEE-ETTEEEEEEC-SEEEECCCTTCSTGGG
T ss_pred hcCCeEEeceeEEEEEEec-CC-ceEEEEe-cCCcEEEEEe-CEEEECCCCCcHHHHh
Confidence 3589999999999997652 22 2346663 2676667888 6999999886665443
No 108
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=76.05 E-value=2.9 Score=32.52 Aligned_cols=58 Identities=17% Similarity=0.280 Sum_probs=42.2
Q ss_pred hhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 11 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 11 ~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
+..+.++++++++.|.+|.-+ + ++.+|.+.+ .+|....+.+ ..||+|.|..-++.+|.
T Consensus 200 ~~~~~gV~v~~~~~v~~i~~~--~-~~~~v~~~~~~~g~~~~i~~-D~vi~a~G~~p~~~~~~ 258 (335)
T 2a87_A 200 ARNNDKIRFLTNHTVVAVDGD--T-TVTGLRVRDTNTGAETTLPV-TGVFVAIGHEPRSGLVR 258 (335)
T ss_dssp HHHCTTEEEECSEEEEEEECS--S-SCCEEEEEEETTSCCEEECC-SCEEECSCEEECCTTTB
T ss_pred HhccCCcEEEeCceeEEEecC--C-cEeEEEEEEcCCCceEEeec-CEEEEccCCccChhHhh
Confidence 345679999999999998644 2 456677764 2565567888 59999999887766553
No 109
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=75.59 E-value=3.5 Score=32.18 Aligned_cols=54 Identities=15% Similarity=0.268 Sum_probs=35.4
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
|+.....+.+++++.++.|++|..+. +. +.+...++ .+.+ +.||+|+|+...|.
T Consensus 93 ~l~~~~~~~gv~i~~~~~v~~i~~~~-~~----~~v~~~~g---~~~~-d~vVlAtG~~~~p~ 146 (369)
T 3d1c_A 93 YLQVVANHYELNIFENTVVTNISADD-AY----YTIATTTE---TYHA-DYIFVATGDYNFPK 146 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECS-SS----EEEEESSC---CEEE-EEEEECCCSTTSBC
T ss_pred HHHHHHHHcCCeEEeCCEEEEEEECC-Ce----EEEEeCCC---EEEe-CEEEECCCCCCccC
Confidence 44444445689999999999997763 22 22222334 3566 69999999976554
No 110
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=75.41 E-value=3.2 Score=34.47 Aligned_cols=64 Identities=14% Similarity=0.176 Sum_probs=41.7
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH-HhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI-LQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l-Ll~Sgi 76 (152)
+.....+.++++++++.|.+|.-++ ++.+..|.+ .+|. ..+.+ ..||+|.|..-+..| |..+|+
T Consensus 232 l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~~v~~--~~G~-~~i~~-D~vv~a~G~~p~~~l~l~~~gl 296 (479)
T 2hqm_A 232 ITDHYVKEGINVHKLSKIVKVEKNV-ETDKLKIHM--NDSK-SIDDV-DELIWTIGRKSHLGMGSENVGI 296 (479)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEE--TTSC-EEEEE-SEEEECSCEEECCCSSGGGGTC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEEcC-CCcEEEEEE--CCCc-EEEEc-CEEEECCCCCCccccChhhcCc
Confidence 3333445689999999999987542 232344554 3553 45777 699999998766655 455554
No 111
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=75.40 E-value=4.1 Score=33.62 Aligned_cols=46 Identities=11% Similarity=0.103 Sum_probs=34.3
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCc
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 65 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai 65 (152)
..+.++++++.|++|..+.+++++++|.. +|. .++| +.||+|+|..
T Consensus 254 ~~G~~i~~~~~V~~i~~~~~~~~~~~V~~---~g~--~~~a-d~VV~a~~~~ 299 (453)
T 2bcg_G 254 IYGGTYMLDTPIDEVLYKKDTGKFEGVKT---KLG--TFKA-PLVIADPTYF 299 (453)
T ss_dssp HTTCEEECSCCCCEEEEETTTTEEEEEEE---TTE--EEEC-SCEEECGGGC
T ss_pred HcCCEEECCCEEEEEEEECCCCeEEEEEE---CCe--EEEC-CEEEECCCcc
Confidence 45689999999999987632357778764 343 4677 6899999876
No 112
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=75.32 E-value=1.4 Score=35.76 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=33.8
Q ss_pred cCCCcEEEcCcEEE---------EEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh-hCCCC
Q psy17300 13 DKNTVQVSKNSEVT---------KLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ-QSGVG 77 (152)
Q Consensus 13 ~~~nl~l~~~~~V~---------ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl-~Sgig 77 (152)
.+.+++++.++.|+ +|..+ ++++ +|.. .+| .++| +.||+|+|+- |+.++. ..|+.
T Consensus 183 ~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~--~~g---~i~a-~~VV~A~G~~-s~~l~~~~~g~~ 247 (405)
T 3c4n_A 183 IGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVH--ETR---QIRA-GVIIVAAGAA-GPALVEQGLGLH 247 (405)
T ss_dssp HTTTCEEECSCEEEEETTEEEEECBCC----------CB--CCE---EEEE-EEEEECCGGG-HHHHHHHHHCCC
T ss_pred HHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEE--CCc---EEEC-CEEEECCCcc-HHHHHHHhcCCC
Confidence 35689999999999 76554 3444 4432 233 5788 6899999985 556665 55543
No 113
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=75.31 E-value=5.2 Score=35.44 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=34.3
Q ss_pred hhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccC
Q psy17300 11 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAAN 63 (152)
Q Consensus 11 ~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaG 63 (152)
+....+.++++++.|.+|+++.+.++++||.. .+|+ .++| +.||..+.
T Consensus 387 ~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~--~~Ge--~i~A-~~VVs~~~ 434 (650)
T 1vg0_A 387 MCAVFGGIYCLRHSVQCLVVDKESRKCKAVID--QFGQ--RIIS-KHFIIEDS 434 (650)
T ss_dssp HHHHTTCEEESSCCEEEEEEETTTCCEEEEEE--TTSC--EEEC-SEEEEEGG
T ss_pred HHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEe--CCCC--EEEc-CEEEEChh
Confidence 34456789999999999999842278999883 4564 3567 57776544
No 114
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=74.90 E-value=6.6 Score=32.34 Aligned_cols=67 Identities=15% Similarity=0.176 Sum_probs=42.6
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHH--HhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRI--LQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~l--Ll~Sgi 76 (152)
++.....+.++++++++.|++|.-+. +....|.+.+ ..+....+.+ ..||+|.|..-+..+ |..+|+
T Consensus 225 ~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~~~~~~i~~-D~vv~a~G~~p~~~~l~l~~~g~ 294 (474)
T 1zmd_A 225 NFQRILQKQGFKFKLNTKVTGATKKS--DGKIDVSIEAASGGKAEVITC-DVLLVCIGRRPFTKNLGLEELGI 294 (474)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEECT--TSCEEEEEEETTSCCCEEEEE-SEEEECSCEEECCTTSSHHHHTC
T ss_pred HHHHHHHHCCCEEEeCceEEEEEEcC--CceEEEEEEecCCCCceEEEc-CEEEECcCCCcCCCcCCchhcCC
Confidence 34444456789999999999997653 2213344432 1233345777 699999998877665 444454
No 115
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=74.55 E-value=4.2 Score=33.41 Aligned_cols=61 Identities=11% Similarity=0.102 Sum_probs=41.2
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcC-CCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNP-QGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~-~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
++.....+.++++++++.|.+|.-+ ++. ..|.+.+. +|....+.+ ..||+|.|..-+..+|
T Consensus 223 ~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~~~~g~~~~~~~-D~vv~a~G~~p~~~~l 284 (470)
T 1dxl_A 223 QFQRSLEKQGMKFKLKTKVVGVDTS--GDG-VKLTVEPSAGGEQTIIEA-DVVLVSAGRTPFTSGL 284 (470)
T ss_dssp HHHHHHHHSSCCEECSEEEEEEECS--SSS-EEEEEEESSSCCCEEEEE-SEEECCCCEEECCTTS
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEEc--CCe-EEEEEEecCCCcceEEEC-CEEEECCCCCcCCCCC
Confidence 3444445678999999999998654 222 34555432 454456778 5999999988777663
No 116
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=74.31 E-value=1.9 Score=36.96 Aligned_cols=65 Identities=18% Similarity=0.260 Sum_probs=40.7
Q ss_pred hhHHhhhcCCCc--EEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 6 IFLRAIKDKNTV--QVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 6 ~~l~~~~~~~nl--~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.|+.....+-++ ++..++.|+++.+++++. ...|.. .+|. .+.+ +.+|+|+|....|++.-..|+
T Consensus 91 ~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~--~~G~--~~~a-d~lV~AtG~~s~p~~p~ipG~ 157 (545)
T 3uox_A 91 RYVNRAADAMDVRKHYRFNTRVTAARYVENDR-LWEVTL--DNEE--VVTC-RFLISATGPLSASRMPDIKGI 157 (545)
T ss_dssp HHHHHHHHHHTCGGGEECSCCEEEEEEEGGGT-EEEEEE--TTTE--EEEE-EEEEECCCSCBC---CCCTTG
T ss_pred HHHHHHHHHcCCcCcEEECCEEEEEEEeCCCC-EEEEEE--CCCC--EEEe-CEEEECcCCCCCCcCCCCCCc
Confidence 345444444444 788999999999885322 233443 3554 4677 699999999989988765554
No 117
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=74.18 E-value=4.7 Score=33.49 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=34.1
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 66 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~ 66 (152)
+.+++++.+ .|++|..++ ++.+.+|.+. +|. .++| +.||.|.|+-.
T Consensus 185 ~~gv~~~~~-~v~~i~~~~-~~~~~~v~~~--~g~--~~~a-d~vV~A~G~~S 230 (511)
T 2weu_A 185 ARGVRHVVD-DVQHVGQDE-RGWISGVHTK--QHG--EISG-DLFVDCTGFRG 230 (511)
T ss_dssp HTTCEEEEC-CEEEEEECT-TSCEEEEEES--SSC--EEEC-SEEEECCGGGC
T ss_pred HCCCEEEEC-eEeEEEEcC-CCCEEEEEEC--CCC--EEEc-CEEEECCCcch
Confidence 468999999 899998754 4566777664 453 5777 69999988743
No 118
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=73.70 E-value=7.9 Score=31.44 Aligned_cols=63 Identities=13% Similarity=0.124 Sum_probs=41.3
Q ss_pred hhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhh-CCC
Q psy17300 6 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQ-SGV 76 (152)
Q Consensus 6 ~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~-Sgi 76 (152)
..+.....+.++++++++.|++|.- + ++.+.+.++...++.+ ..||++.|....+.+-.. +|+
T Consensus 204 ~~l~~~l~~~GV~i~~~~~v~~v~~----~---~v~~~~~~~~g~~i~~-D~vv~a~G~~~~~~l~~~~~gl 267 (430)
T 3h28_A 204 RLVEDLFAERNIDWIANVAVKAIEP----D---KVIYEDLNGNTHEVPA-KFTMFMPSFQGPEVVASAGDKV 267 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEECS----S---EEEEECTTSCEEEEEC-SEEEEECEEECCHHHHTTCTTT
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEeC----C---eEEEEecCCCceEEee-eEEEECCCCccchhHhhccccC
Confidence 3444445567999999999999842 2 2556544444567888 589999887765533333 455
No 119
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=73.44 E-value=6.9 Score=32.17 Aligned_cols=49 Identities=12% Similarity=0.085 Sum_probs=32.9
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l 70 (152)
..+++|++++.|++|..++ +. |.+...+|. .+++ +.||+|+|.-...+|
T Consensus 268 ~g~~~i~~~~~V~~i~~~~--~~---v~v~~~~g~--~~~a-d~vI~a~~~~~l~~i 316 (495)
T 2vvm_A 268 TGRLGYVFGCPVRSVVNER--DA---ARVTARDGR--EFVA-KRVVCTIPLNVLSTI 316 (495)
T ss_dssp TTCEEEESSCCEEEEEECS--SS---EEEEETTCC--EEEE-EEEEECCCGGGGGGS
T ss_pred cCceEEEeCCEEEEEEEcC--CE---EEEEECCCC--EEEc-CEEEECCCHHHHhhe
Confidence 3348999999999998763 32 233324554 4677 699999987554444
No 120
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=73.08 E-value=12 Score=30.84 Aligned_cols=68 Identities=13% Similarity=0.085 Sum_probs=43.4
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCC-CcE--EEEEeCcEEEEccCCccChH-H-HhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQ-GKT--IKVNANREVVLAANSINSVR-I-LQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~-g~~--~~~~a~k~VIlaaGai~tP~-l-Ll~Sgi 76 (152)
++.....+.++++++++.|.++.-+. ++....|.+.+.. |.. ..+.+ ..||+|.|..-+.. | |...|+
T Consensus 233 ~~~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~~v~~~~~~~g~~~g~~~~~-D~vi~a~G~~p~~~~l~l~~~g~ 305 (478)
T 3dk9_A 233 NCTEELENAGVEVLKFSQVKEVKKTL-SGLEVSMVTAVPGRLPVMTMIPDV-DCLLWAIGRVPNTKDLSLNKLGI 305 (478)
T ss_dssp HHHHHHHHTTCEEETTEEEEEEEECS-SSEEEEEEECCTTSCCEEEEEEEE-SEEEECSCEEESCTTSCGGGGTC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEcC-CCcEEEEEEccCCCCcccceEEEc-CEEEEeeccccCCCCCCchhcCC
Confidence 33344456789999999999987653 3323345555322 333 56778 59999999876655 3 444444
No 121
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=72.69 E-value=3.3 Score=34.12 Aligned_cols=62 Identities=18% Similarity=0.243 Sum_probs=40.9
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH--HhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l--Ll~Sgi 76 (152)
+.....+.++++++++.|.+|..+. +....|.+ ..+|+ +.+ ..||+|+|..-+..+ |...|+
T Consensus 217 l~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~~v~~-~~~g~---i~a-D~Vv~a~G~~p~~~~l~l~~~g~ 280 (463)
T 4dna_A 217 LHAAMEEKGIRILCEDIIQSVSADA--DGRRVATT-MKHGE---IVA-DQVMLALGRMPNTNGLGLEAAGV 280 (463)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECT--TSCEEEEE-SSSCE---EEE-SEEEECSCEEESCTTSSTGGGTC
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcC--CCEEEEEE-cCCCe---EEe-CEEEEeeCcccCCCCCCccccCc
Confidence 3334456789999999999997653 22234442 24553 777 699999998766665 344444
No 122
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=72.04 E-value=8.3 Score=31.63 Aligned_cols=64 Identities=19% Similarity=0.215 Sum_probs=42.6
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH--HhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l--Ll~Sgi 76 (152)
+.....+.++++++++.|.+|.-+ ++. ..|.+. .+|....+.+ ..||+|.|..-+..+ |...|+
T Consensus 218 l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~-~~g~~~~~~~-D~vv~a~G~~p~~~~l~~~~~gl 283 (464)
T 2a8x_A 218 IEKQFKKLGVTILTATKVESIADG--GSQ-VTVTVT-KDGVAQELKA-EKVLQAIGFAPNVEGYGLDKAGV 283 (464)
T ss_dssp HHHHHHHHTCEEECSCEEEEEEEC--SSC-EEEEEE-SSSCEEEEEE-SEEEECSCEEECCSSSCHHHHTC
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEc--CCe-EEEEEE-cCCceEEEEc-CEEEECCCCCccCCCCCchhcCC
Confidence 334344568999999999998755 222 234554 2465566888 699999998876666 344444
No 123
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=71.33 E-value=6.3 Score=32.26 Aligned_cols=58 Identities=14% Similarity=0.180 Sum_probs=40.9
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
++.....+.++++++++.|++|.-+ ++++..|.. +|. .+.+ ..||+|+|..-+..+|.
T Consensus 196 ~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~---~g~--~i~~-D~vv~a~G~~p~~~ll~ 253 (452)
T 2cdu_A 196 ILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL---DGK--EIKS-DIAILCIGFRPNTELLK 253 (452)
T ss_dssp HHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET---TSC--EEEE-SEEEECCCEEECCGGGT
T ss_pred HHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe---CCC--EEEC-CEEEECcCCCCCHHHHH
Confidence 3444445678999999999999754 455555543 453 4677 59999999987777654
No 124
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=71.09 E-value=10 Score=30.93 Aligned_cols=59 Identities=17% Similarity=0.187 Sum_probs=39.8
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.....+.++++++++.|.++.-+ ++. ..|.+. .+|....+.+ ..||+|.|..-+..+|
T Consensus 217 l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~-~~g~~~~~~~-D~vv~a~G~~p~~~~l 275 (455)
T 1ebd_A 217 IKKRLKKKGVEVVTNALAKGAEER--EDG-VTVTYE-ANGETKTIDA-DYVLVTVGRRPNTDEL 275 (455)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEE--TTE-EEEEEE-ETTEEEEEEE-SEEEECSCEEESCSSS
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEe--CCe-EEEEEE-eCCceeEEEc-CEEEECcCCCcccCcC
Confidence 333344678999999999998765 333 234444 2344456788 6999999988666653
No 125
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=70.87 E-value=6.9 Score=32.56 Aligned_cols=56 Identities=14% Similarity=0.171 Sum_probs=38.1
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l 70 (152)
.+.....+.++++++++.|++|.-+ ++. |.+...+|. .+.+ +.||+|+|..-+..+
T Consensus 228 ~l~~~l~~~GV~i~~~~~V~~i~~~--~~~---v~v~~~~g~--~i~a-D~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 228 VLEESFAERGVRLFKNARAASVTRT--GAG---VLVTMTDGR--TVEG-SHALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHHHHHTTCEEETTCCEEEEEEC--SSS---EEEEETTSC--EEEE-SEEEECCCEEECCSS
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEe--CCE---EEEEECCCc--EEEc-CEEEECCCCCcCCCc
Confidence 3334445678999999999999765 333 233323453 4667 699999998876666
No 126
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=70.69 E-value=5 Score=32.19 Aligned_cols=48 Identities=19% Similarity=0.249 Sum_probs=31.6
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 64 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGa 64 (152)
+..+.++.+ +|++++.|++|..+ ++.++ |.+ .+|. ++.| +.||+|+|.
T Consensus 210 ~~~~~~~~g-~i~~~~~V~~i~~~--~~~v~-v~~--~~g~--~~~a-d~vi~a~~~ 257 (431)
T 3k7m_X 210 VDAMSQEIP-EIRLQTVVTGIDQS--GDVVN-VTV--KDGH--AFQA-HSVIVATPM 257 (431)
T ss_dssp HHHHHTTCS-CEESSCCEEEEECS--SSSEE-EEE--TTSC--CEEE-EEEEECSCG
T ss_pred HHHHHhhCC-ceEeCCEEEEEEEc--CCeEE-EEE--CCCC--EEEe-CEEEEecCc
Confidence 333444555 99999999999766 33332 443 3554 4677 689999873
No 127
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=70.44 E-value=7.8 Score=31.72 Aligned_cols=56 Identities=13% Similarity=0.081 Sum_probs=39.5
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
.+.....+.++++++++.|++|..+ ++++ .|.. .++ .+.+ ..||+|.|..-+..+|
T Consensus 194 ~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~--~~g---~i~a-D~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 194 EVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLET--SEQ---EISC-DSGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEE--SSC---EEEE-SEEEECSCCBCCCSSC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEE--CCC---EEEe-CEEEECcCCCCChHHH
Confidence 3444455789999999999999755 3444 5554 233 5777 6999999987666554
No 128
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=70.39 E-value=3.7 Score=33.75 Aligned_cols=44 Identities=16% Similarity=0.260 Sum_probs=34.2
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCc
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 65 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai 65 (152)
..+.++++++.|++|..+ ++++++|.. +|. .++| +.||++++..
T Consensus 246 ~~G~~i~~~~~V~~I~~~--~~~v~~v~~---~g~--~~~a-d~VV~a~~~~ 289 (433)
T 1d5t_A 246 IYGGTYMLNKPVDDIIME--NGKVVGVKS---EGE--VARC-KQLICDPSYV 289 (433)
T ss_dssp HHTCCCBCSCCCCEEEEE--TTEEEEEEE---TTE--EEEC-SEEEECGGGC
T ss_pred HcCCEEECCCEEEEEEEe--CCEEEEEEE---CCe--EEEC-CEEEECCCCC
Confidence 346789999999999887 678888763 453 4777 6999999876
No 129
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=69.46 E-value=2.1 Score=35.43 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=35.5
Q ss_pred cEEEcCcEEEEEEEeCCCC---eEEEEEEEcCCCcE-EEEEeCcEEEEccCCccChHHH
Q psy17300 17 VQVSKNSEVTKLCFDETKT---KVTGVEFRNPQGKT-IKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~---~~~gV~~~~~~g~~-~~~~a~k~VIlaaGai~tP~lL 71 (152)
.+|++++.|++|..+.++. ....|.+.+.+|.. ..+.| +.||+++..-...+||
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~a-d~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESF-DAVIMTAPLCDVKSMK 313 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEE-SEEEECSCHHHHHTSE
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEEC-CEEEECCCHHHHHHHh
Confidence 5799999999998874210 13567776444532 34677 6899988765555554
No 130
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=69.16 E-value=4.5 Score=34.24 Aligned_cols=54 Identities=20% Similarity=0.385 Sum_probs=37.8
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.++..++.|+++.++++++. ..|.. .+|. ++++ +.||+|.|....|++....|+
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~-w~V~~--~~G~--~~~a-d~vV~AtG~~s~p~~p~i~G~ 164 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNT-WTVDT--NHGD--RIRA-RYLIMASGQLSVPQLPNFPGL 164 (542)
T ss_dssp GGEECSCCEEEEEEETTTTE-EEEEE--TTCC--EEEE-EEEEECCCSCCCCCCCCCTTG
T ss_pred ceEEcCcEEEEEEEcCCCCe-EEEEE--CCCC--EEEe-CEEEECcCCCCCCCCCCCCCc
Confidence 57889999999998853332 33443 3564 4667 699999999888876554443
No 131
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=69.13 E-value=15 Score=31.15 Aligned_cols=50 Identities=18% Similarity=0.209 Sum_probs=36.1
Q ss_pred EEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 19 VSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 19 l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
|+.++.|+.+..++ +.++ |.+.+ .+|...+++| +.||.|.|+-...|=++
T Consensus 152 v~~~~~v~~~~~~~--~~v~-v~~~~~~~G~~~~i~a-~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 152 LRTRSRLDSFEQRD--DHVR-ATITDLRTGATRAVHA-RYLVACDGASSPTRKAL 202 (549)
T ss_dssp EECSEEEEEEEECS--SCEE-EEEEETTTCCEEEEEE-EEEEECCCTTCHHHHHH
T ss_pred cccCcEEEEEEEeC--CEEE-EEEEECCCCCEEEEEe-CEEEECCCCCcHHHHHc
Confidence 99999999998773 3444 66664 3466677888 68889888876554444
No 132
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=68.79 E-value=7.8 Score=32.37 Aligned_cols=62 Identities=21% Similarity=0.319 Sum_probs=40.8
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH--HhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l--Ll~Sgi 76 (152)
+.....+.++++++++.|.+|.-++ +....|.+ .+|. .+.+ ..||+|+|..-+... |..+|+
T Consensus 241 l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~~v~~--~~G~--~i~~-D~vv~a~G~~p~~~~L~l~~~gl 304 (495)
T 2wpf_A 241 VTKQLTANGIEIMTNENPAKVSLNT--DGSKHVTF--ESGK--TLDV-DVVMMAIGRIPRTNDLQLGNVGV 304 (495)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEECT--TSCEEEEE--TTSC--EEEE-SEEEECSCEEECCGGGTGGGTTC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcC--CceEEEEE--CCCc--EEEc-CEEEECCCCcccccccchhhcCc
Confidence 3343456789999999999987552 22234554 3554 5777 699999998766653 344444
No 133
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=68.75 E-value=3.9 Score=35.15 Aligned_cols=51 Identities=29% Similarity=0.364 Sum_probs=35.2
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
+.+++|+.++.|+.|..++ +.++ |.+.+.+|. .+++| +.||.|.|+-..-+
T Consensus 160 ~~gv~i~~~~~v~~l~~~~--~~v~-v~~~~~~G~-~~~~a-~~vV~ADG~~S~vR 210 (570)
T 3fmw_A 160 EAGAEIPRGHEVTRLRQDA--EAVE-VTVAGPSGP-YPVRA-RYGVGCDGGRSTVR 210 (570)
T ss_dssp HHTEECCBSCEEEECCBCS--SCEE-EEEEETTEE-EEEEE-SEEEECSCSSCHHH
T ss_pred hCCCEEEeCCEEEEEEEcC--CeEE-EEEEeCCCc-EEEEe-CEEEEcCCCCchHH
Confidence 3589999999999987763 3333 555434452 56888 68888888755433
No 134
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=68.09 E-value=6.8 Score=30.04 Aligned_cols=49 Identities=16% Similarity=0.227 Sum_probs=35.0
Q ss_pred CcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 16 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 16 nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+++|++++.|++|..++ +. +.+...+|. ....+ +.||+|.|+-...++|
T Consensus 119 g~~i~~~~~v~~i~~~~--~~---~~v~~~~g~-~~~~a-~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGE--EH---WNLLDAEGQ-NHGPF-SHVIIATPAPQASTLL 167 (336)
T ss_dssp TCCEECSCCEEEEEECS--SC---EEEEETTSC-EEEEE-SEEEECSCHHHHGGGG
T ss_pred cCcEEecCEEEEEEEeC--CE---EEEEeCCCc-Ccccc-CEEEEcCCHHHHHHhh
Confidence 78999999999998764 32 333334564 33446 7999999987777766
No 135
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=67.72 E-value=5.1 Score=33.95 Aligned_cols=45 Identities=16% Similarity=0.130 Sum_probs=33.5
Q ss_pred CCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc
Q psy17300 15 NTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 66 (152)
Q Consensus 15 ~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~ 66 (152)
++++++.+ .|++|..++ ++.+.+|... +|. .+.| +.||.|.|+-.
T Consensus 208 ~Gv~i~~~-~V~~i~~~~-~g~~~~v~~~--~G~--~i~a-d~vI~A~G~~S 252 (550)
T 2e4g_A 208 LGVRHVED-RVEHVQRDA-NGNIESVRTA--TGR--VFDA-DLFVDCSGFRG 252 (550)
T ss_dssp SCCEEEEC-CEEEEEECT-TSCEEEEEET--TSC--EEEC-SEEEECCGGGC
T ss_pred CCcEEEEC-eEeEEEEcC-CCCEEEEEEC--CCC--EEEC-CEEEECCCCch
Confidence 48999999 999998764 4566777664 453 5777 69999998643
No 136
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=67.50 E-value=6.7 Score=32.68 Aligned_cols=62 Identities=21% Similarity=0.319 Sum_probs=40.4
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH-H-HhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR-I-LQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~-l-Ll~Sgi 76 (152)
+.....+.++++++++.|++|.-++ ++ ...|.+ .+|. .+.+ ..||+|+|..-+.. | |...|+
T Consensus 237 l~~~l~~~GV~i~~~~~v~~i~~~~-~~-~~~v~~--~~G~--~i~~-D~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 237 LTEQLRANGINVRTHENPAKVTKNA-DG-TRHVVF--ESGA--EADY-DVVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp HHHHHHHTTEEEEETCCEEEEEECT-TS-CEEEEE--TTSC--EEEE-SEEEECSCEEESCTTSCGGGGTC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcC-CC-EEEEEE--CCCc--EEEc-CEEEEccCCCcCccccCchhcCc
Confidence 3344456789999999999997653 22 234444 3554 5677 69999999876554 3 344444
No 137
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=67.17 E-value=8.2 Score=32.38 Aligned_cols=44 Identities=7% Similarity=0.123 Sum_probs=32.1
Q ss_pred CCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCc
Q psy17300 15 NTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 65 (152)
Q Consensus 15 ~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai 65 (152)
.+++++.+ .|+.|..++ ++.+.+|... +|.+ ++| +.||.|.|+-
T Consensus 189 ~Gv~i~~~-~v~~i~~~~-~g~~~~v~~~--~g~~--i~a-d~vV~AdG~~ 232 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIINNQ-HGDIEKLITK--QNGE--ISG-QLFIDCTGAK 232 (526)
T ss_dssp SCCEEEEC-CEEEEEECT-TSCEEEEEES--SSCE--EEC-SEEEECSGGG
T ss_pred CCCEEEEe-EEEEEEecC-CCcEEEEEEC--CCCE--EEc-CEEEECCCcc
Confidence 68999999 599998764 4556666653 4543 778 6999998874
No 138
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=67.10 E-value=9.6 Score=28.92 Aligned_cols=59 Identities=14% Similarity=0.061 Sum_probs=37.6
Q ss_pred hhHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc-ChHHHh
Q psy17300 6 IFLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN-SVRILQ 72 (152)
Q Consensus 6 ~~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~-tP~lLl 72 (152)
.++.....+.+++++.++.|+++..+. .....|.. .++. +.+ +.+|+|.|+-. .|+.+-
T Consensus 71 ~~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~--~~g~---~~~-d~vVlAtG~~~~~p~~~~ 130 (332)
T 3lzw_A 71 NNLKEQMAKFDQTICLEQAVESVEKQA--DGVFKLVT--NEET---HYS-KTVIITAGNGAFKPRKLE 130 (332)
T ss_dssp HHHHHHHTTSCCEEECSCCEEEEEECT--TSCEEEEE--SSEE---EEE-EEEEECCTTSCCEECCCC
T ss_pred HHHHHHHHHhCCcEEccCEEEEEEECC--CCcEEEEE--CCCE---EEe-CEEEECCCCCcCCCCCCC
Confidence 345554556689999999999998763 21122332 2332 666 69999999843 455443
No 139
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=66.67 E-value=3.4 Score=32.24 Aligned_cols=48 Identities=17% Similarity=0.158 Sum_probs=32.3
Q ss_pred CcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 16 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 16 nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.+|++++.|++|..++ +.++ |.+ .+|.. +.+ +.||+|+.+-...+||
T Consensus 123 g~~i~~~~~V~~i~~~~--~~~~-v~~--~~g~~--~~a-d~vV~A~p~~~~~~ll 170 (342)
T 3qj4_A 123 GAEVYFRHRVTQINLRD--DKWE-VSK--QTGSP--EQF-DLIVLTMPVPEILQLQ 170 (342)
T ss_dssp TCEEESSCCEEEEEECS--SSEE-EEE--SSSCC--EEE-SEEEECSCHHHHTTCB
T ss_pred CCEEEeCCEEEEEEEcC--CEEE-EEE--CCCCE--EEc-CEEEECCCHHHHHHHh
Confidence 68999999999998763 3322 333 35543 466 6999998765444444
No 140
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=66.23 E-value=7.4 Score=32.71 Aligned_cols=47 Identities=11% Similarity=0.193 Sum_probs=33.9
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINS 67 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~t 67 (152)
+.+++++.+ .|+.|..++ ++.+.+|.+. +|. .+++ +.||.|.|+-..
T Consensus 177 ~~gv~~~~~-~v~~i~~~~-~g~~~~v~~~--~g~--~i~a-d~vV~A~G~~s~ 223 (538)
T 2aqj_A 177 ERGVNRVVD-EVVDVRLNN-RGYISNLLTK--EGR--TLEA-DLFIDCSGMRGL 223 (538)
T ss_dssp HTTCEEEEC-CEEEEEECT-TSCEEEEEET--TSC--EECC-SEEEECCGGGCC
T ss_pred HCCCEEEEe-eEeEEEEcC-CCcEEEEEEC--CCc--EEEe-CEEEECCCCchh
Confidence 468999999 899998764 4556667653 453 5777 699999987543
No 141
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=66.18 E-value=17 Score=27.72 Aligned_cols=60 Identities=18% Similarity=0.121 Sum_probs=36.8
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc-ChHHHhhCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN-SVRILQQSG 75 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~-tP~lLl~Sg 75 (152)
+.....+.+++++.++.|++|..+. + .+.+...++. .+.+ +.+|+|+|+-. .|+.+-..|
T Consensus 71 l~~~~~~~~~~~~~~~~v~~i~~~~--~---~~~v~~~~g~--~~~~-~~lv~AtG~~~~~p~~~~i~g 131 (335)
T 2zbw_A 71 LVEQVAPFNPVYSLGERAETLEREG--D---LFKVTTSQGN--AYTA-KAVIIAAGVGAFEPRRIGAPG 131 (335)
T ss_dssp HHHHHGGGCCEEEESCCEEEEEEET--T---EEEEEETTSC--EEEE-EEEEECCTTSEEEECCCCCTT
T ss_pred HHHHHHHcCCEEEeCCEEEEEEECC--C---EEEEEECCCC--EEEe-CEEEECCCCCCCCCCCCCCCC
Confidence 3333344568999999999998763 3 2333323453 3566 69999999843 454443333
No 142
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=65.96 E-value=14 Score=30.58 Aligned_cols=64 Identities=13% Similarity=0.169 Sum_probs=42.2
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCC--CcEEEEEeCcEEEEccCCccChHHH--hhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQ--GKTIKVNANREVVLAANSINSVRIL--QQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~--g~~~~~~a~k~VIlaaGai~tP~lL--l~Sgi 76 (152)
++.....+.++++++++.|.+|.-+ ++. ..|.+.+.. |. .+.+ ..||+|.|..-+..+| ...|+
T Consensus 231 ~l~~~l~~~gV~i~~~~~v~~i~~~--~~~-~~v~~~~~~~~g~--~~~~-D~vv~a~G~~p~~~~l~~~~~gl 298 (482)
T 1ojt_A 231 VWQKQNEYRFDNIMVNTKTVAVEPK--EDG-VYVTFEGANAPKE--PQRY-DAVLVAAGRAPNGKLISAEKAGV 298 (482)
T ss_dssp HHHHHHGGGEEEEECSCEEEEEEEE--TTE-EEEEEESSSCCSS--CEEE-SCEEECCCEEECGGGTTGGGTTC
T ss_pred HHHHHHHhcCCEEEECCEEEEEEEc--CCe-EEEEEeccCCCce--EEEc-CEEEECcCCCcCCCCCChhhcCc
Confidence 3444445678999999999999765 332 456665311 33 3556 5899999998777764 44454
No 143
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=65.73 E-value=11 Score=31.08 Aligned_cols=57 Identities=21% Similarity=0.239 Sum_probs=39.0
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH-HhhCCC
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI-LQQSGV 76 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l-Ll~Sgi 76 (152)
+++++++.|.+|.-++ ++.+. |.+.+.+|.+..+.+ ..||+|.|..-+..| |...|+
T Consensus 226 v~i~~~~~v~~i~~~~-~~~v~-v~~~~~~G~~~~i~~-D~vi~a~G~~p~~~l~l~~~gl 283 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIK-DDEYE-VIYSTKDGSKKSIFT-NSVVLAAGRRPVIPEGAREIGL 283 (466)
T ss_dssp CCEECSCCEEEEEEEE-TTEEE-EEECCTTSCCEEEEE-SCEEECCCEEECCCTTTGGGTC
T ss_pred EEEEECCEEEEEEEcC-CCcEE-EEEEecCCceEEEEc-CEEEECcCCCcccccchhhcCc
Confidence 8999999999997652 14432 555422566667888 599999998766654 444554
No 144
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=65.30 E-value=14 Score=30.48 Aligned_cols=60 Identities=17% Similarity=0.212 Sum_probs=41.8
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
+.....+.++++++++.|++|.-+ +++..|.. ++ ..+.+ +.||+|+|..-++.+|..+|+
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~---~~--~~i~~-D~vi~a~G~~p~~~~l~~~g~ 292 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGN---ERVEAVET---DK--GTYKA-DLVLVSVGVKPNTDFLEGTNI 292 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEES---SBEEEEEE---TT--EEEEC-SEEEECSCEEESCGGGTTSCC
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEE---CC--CEEEc-CEEEECcCCCcChHHHHhCCc
Confidence 333344678999999999998643 34555543 23 25777 699999999877777766665
No 145
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=65.17 E-value=11 Score=28.42 Aligned_cols=54 Identities=20% Similarity=0.284 Sum_probs=34.7
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCc
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 65 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai 65 (152)
++.....+.+++++.++.|+.+..+.++.....|.. .+|. .+++ +.+|+|.|+-
T Consensus 61 ~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~--~~g~--~~~~-~~lv~AtG~~ 114 (310)
T 1fl2_A 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIET--ASGA--VLKA-RSIIVATGAK 114 (310)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEE--TTSC--EEEE-EEEEECCCEE
T ss_pred HHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEE--CCCC--EEEe-CEEEECcCCC
Confidence 444444567899999999999876532122223333 3453 3566 6999999974
No 146
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=65.08 E-value=3.1 Score=33.95 Aligned_cols=50 Identities=18% Similarity=0.153 Sum_probs=33.8
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.+.+|++++.|++|..+. +.+..|. .++. .+.+ +.||+|+++-...+||
T Consensus 246 ~~g~~i~~~~~V~~i~~~~--~~~~~v~---~~~~--~~~a-d~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 246 SRGVSVLRGQPVCGLSLQA--EGRWKVS---LRDS--SLEA-DHVISAIPASVLSELL 295 (477)
T ss_dssp HTTCEEECSCCCCEEEECG--GGCEEEE---CSSC--EEEE-SEEEECSCHHHHHHHS
T ss_pred hcCCEEEeCCEEEEEEEcC--CceEEEE---ECCe--EEEc-CEEEECCCHHHHHHhc
Confidence 3478999999999998763 3323343 2343 4677 6999999775555553
No 147
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=64.45 E-value=7.2 Score=31.58 Aligned_cols=59 Identities=19% Similarity=0.276 Sum_probs=42.4
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
++.....+.++++++++.|.+|. + + +|.+ .+|. .+.+ ..||+|.|..-+..+|..+|+.
T Consensus 192 ~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~--~~g~--~i~~-D~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 192 FVARYHAAQGVDLRFERSVTGSV-D--G----VVLL--DDGT--RIAA-DMVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEE-T--T----EEEE--TTSC--EEEC-SEEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEE--CCCC--EEEc-CEEEECcCCCccHHHHHhCCCC
Confidence 33344456789999999999987 3 3 4555 3553 4677 6999999998777787777664
No 148
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=63.06 E-value=7 Score=32.37 Aligned_cols=58 Identities=17% Similarity=0.260 Sum_probs=39.5
Q ss_pred hhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH--HhhCCC
Q psy17300 11 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI--LQQSGV 76 (152)
Q Consensus 11 ~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l--Ll~Sgi 76 (152)
...+.++++++++.|++|..+ ++.+ .|.+ .+|. .+.+ +.||+|.|..-+..+ |...|+
T Consensus 241 ~l~~~Gv~i~~~~~V~~i~~~--~~~v-~v~~--~~g~--~i~a-D~Vi~A~G~~p~~~~l~l~~~g~ 300 (484)
T 3o0h_A 241 AMVAKGISIIYEATVSQVQST--ENCY-NVVL--TNGQ--TICA-DRVMLATGRVPNTTGLGLERAGV 300 (484)
T ss_dssp HHHHHTCEEESSCCEEEEEEC--SSSE-EEEE--TTSC--EEEE-SEEEECCCEEECCTTCCHHHHTC
T ss_pred HHHHCCCEEEeCCEEEEEEee--CCEE-EEEE--CCCc--EEEc-CEEEEeeCCCcCCCCCChhhcCc
Confidence 334568999999999999765 3333 4444 3553 4667 699999998766665 444444
No 149
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=62.93 E-value=21 Score=29.09 Aligned_cols=43 Identities=21% Similarity=0.203 Sum_probs=30.0
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCC
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 64 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGa 64 (152)
.+|++++.|++|..+ ++.++ |.+.+ .+....++| +.||+++..
T Consensus 252 ~~i~~~~~V~~i~~~--~~~v~-v~~~~-g~~~~~~~a-d~vI~a~p~ 294 (489)
T 2jae_A 252 DNIVFGAEVTSMKNV--SEGVT-VEYTA-GGSKKSITA-DYAICTIPP 294 (489)
T ss_dssp GGEETTCEEEEEEEE--TTEEE-EEEEE-TTEEEEEEE-SEEEECSCH
T ss_pred CeEEECCEEEEEEEc--CCeEE-EEEec-CCeEEEEEC-CEEEECCCH
Confidence 469999999999887 44444 55542 223356788 699998864
No 150
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=62.53 E-value=18 Score=29.70 Aligned_cols=55 Identities=16% Similarity=0.105 Sum_probs=37.6
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
+.....+.++++++++.|.+|.-++ +. ..|.+ .+|.+ .+.+ ..||+|.|..-+..
T Consensus 213 l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~--~~G~~-~i~~-D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 213 LAENMHAQGIETHLEFAVAALERDA--QG-TTLVA--QDGTR-LEGF-DSVIWAVGRAPNTR 267 (463)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEEET--TE-EEEEE--TTCCE-EEEE-SEEEECSCEEESCT
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeC--Ce-EEEEE--eCCcE-EEEc-CEEEECCCCCcCCC
Confidence 3333446789999999999997653 22 34444 35654 5777 69999999875554
No 151
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=62.26 E-value=12 Score=31.19 Aligned_cols=64 Identities=13% Similarity=0.213 Sum_probs=41.0
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH-H-HhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR-I-LQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~-l-Ll~Sgi 76 (152)
++.....+.++++++++.|.+|.-++ ++. ..|.+ .+|.+ .+.+ ..||+|.|..-+.. | |..+|+
T Consensus 222 ~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~~v~~--~~g~~-~~~~-D~vi~a~G~~p~~~~l~~~~~g~ 287 (500)
T 1onf_A 222 VLENDMKKNNINIVTFADVVEIKKVS-DKN-LSIHL--SDGRI-YEHF-DHVIYCVGRSPDTENLKLEKLNV 287 (500)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS-TTC-EEEEE--TTSCE-EEEE-SEEEECCCBCCTTTTSSCTTTTC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEEcC-Cce-EEEEE--CCCcE-EEEC-CEEEECCCCCcCCCCCCchhcCc
Confidence 33344456789999999999987543 222 33444 35654 4777 69999999876664 3 344444
No 152
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=61.97 E-value=12 Score=29.84 Aligned_cols=56 Identities=14% Similarity=0.191 Sum_probs=37.0
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
+.....+.+++++.+ .|+++..+ +. .|.+.+..+....+.+ +.+|+|.|+ .|....
T Consensus 62 ~~~~~~~~gv~~~~~-~v~~i~~~--~~---~V~~~~g~~~~~~~~~-d~lViAtG~--~~~~~~ 117 (409)
T 3h8l_A 62 LSEALPEKGIQFQEG-TVEKIDAK--SS---MVYYTKPDGSMAEEEY-DYVIVGIGA--HLATEL 117 (409)
T ss_dssp HHHHTGGGTCEEEEC-EEEEEETT--TT---EEEEECTTSCEEEEEC-SEEEECCCC--EECGGG
T ss_pred HHHHHhhCCeEEEEe-eEEEEeCC--CC---EEEEccCCcccceeeC-CEEEECCCC--CcCccC
Confidence 444445668999887 88888655 33 3556544445566777 699999998 454443
No 153
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=61.21 E-value=3.2 Score=33.36 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=28.9
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 66 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~ 66 (152)
.+|++++.|++|..+ +++++ |.+ .+|. +.+ +.||+++++-.
T Consensus 218 ~~v~~~~~V~~i~~~--~~~v~-v~~--~~g~---~~a-d~Vv~a~~~~~ 258 (424)
T 2b9w_A 218 HPAERNVDITRITRE--DGKVH-IHT--TDWD---RES-DVLVLTVPLEK 258 (424)
T ss_dssp SCCBCSCCEEEEECC--TTCEE-EEE--SSCE---EEE-SEEEECSCHHH
T ss_pred ceEEcCCEEEEEEEE--CCEEE-EEE--CCCe---EEc-CEEEECCCHHH
Confidence 468999999999876 34443 443 3442 677 69999998753
No 154
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=61.07 E-value=22 Score=27.54 Aligned_cols=61 Identities=26% Similarity=0.205 Sum_probs=38.2
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc-ChHHHhhCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN-SVRILQQSG 75 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~-tP~lLl~Sg 75 (152)
+.....+.+++++.++.|++|..+. ++. ..|.. .+|. .+.+ +.+|+|.|+-. .|+.+-..|
T Consensus 80 l~~~~~~~~~~~~~~~~v~~i~~~~-~~~-~~v~~--~~g~--~~~~-~~li~AtG~~~~~~~~~~i~g 141 (360)
T 3ab1_A 80 LWAQAERYNPDVVLNETVTKYTKLD-DGT-FETRT--NTGN--VYRS-RAVLIAAGLGAFEPRKLPQLG 141 (360)
T ss_dssp HHHHHHTTCCEEECSCCEEEEEECT-TSC-EEEEE--TTSC--EEEE-EEEEECCTTCSCCBCCCGGGC
T ss_pred HHHHHHHhCCEEEcCCEEEEEEECC-Cce-EEEEE--CCCc--EEEe-eEEEEccCCCcCCCCCCCCCC
Confidence 3333345678999999999998763 221 22332 3453 3666 69999999854 566554444
No 155
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=60.46 E-value=12 Score=31.43 Aligned_cols=58 Identities=14% Similarity=0.210 Sum_probs=37.6
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCc--EEEEEeCcEEEEccCCccChHH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGK--TIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~--~~~~~a~k~VIlaaGai~tP~l 70 (152)
++.....+.++++++++.|.+|.- +.... .....+|. ..++.+ ..||+|+|.--+|.+
T Consensus 277 ~~~~~L~~~GV~v~~~~~v~~v~~---~~~~~--~~~~~dg~~~~~~i~a-d~viwa~Gv~~~~~~ 336 (502)
T 4g6h_A 277 YAQSHLENTSIKVHLRTAVAKVEE---KQLLA--KTKHEDGKITEETIPY-GTLIWATGNKARPVI 336 (502)
T ss_dssp HHHHHHHHTTCEEETTEEEEEECS---SEEEE--EEECTTSCEEEEEEEC-SEEEECCCEECCHHH
T ss_pred HHHHHHHhcceeeecCceEEEEeC---CceEE--EEEecCcccceeeecc-CEEEEccCCcCCHHH
Confidence 444444567899999999999742 22222 22223444 356888 699999998877643
No 156
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=60.45 E-value=21 Score=29.88 Aligned_cols=64 Identities=9% Similarity=0.293 Sum_probs=43.1
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeC-----------------CCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDE-----------------TKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR 69 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~-----------------~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~ 69 (152)
++.....+.++++++++.|.+|.-+. +++++. +.+ .+|. .+.+ ..||+|.|..-++.
T Consensus 197 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~--~~g~--~i~~-D~vi~a~G~~p~~~ 270 (565)
T 3ntd_A 197 FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTL--SNGE--LLET-DLLIMAIGVRPETQ 270 (565)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEE--TTSC--EEEE-SEEEECSCEEECCH
T ss_pred HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEE--cCCC--EEEc-CEEEECcCCccchH
Confidence 34444456789999999999997631 123332 333 3554 5677 69999999988877
Q ss_pred HHhhCCC
Q psy17300 70 ILQQSGV 76 (152)
Q Consensus 70 lLl~Sgi 76 (152)
++...|+
T Consensus 271 l~~~~g~ 277 (565)
T 3ntd_A 271 LARDAGL 277 (565)
T ss_dssp HHHHHTC
T ss_pred HHHhCCc
Confidence 7766665
No 157
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=58.90 E-value=9 Score=31.44 Aligned_cols=63 Identities=16% Similarity=0.196 Sum_probs=40.3
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChH-H-HhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVR-I-LQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~-l-Ll~Sgi 76 (152)
++.....+.++++++++.|.+|.-++ ++ ...|.+ .+|. .+.+ +.||+|+|..-+.. | |..+|+
T Consensus 213 ~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~-~~~v~~--~~g~--~i~~-D~vv~a~G~~p~~~~l~~~~~gl 277 (450)
T 1ges_A 213 TLVEVMNAEGPQLHTNAIPKAVVKNT-DG-SLTLEL--EDGR--SETV-DCLIWAIGREPANDNINLEAAGV 277 (450)
T ss_dssp HHHHHHHHHSCEEECSCCEEEEEECT-TS-CEEEEE--TTSC--EEEE-SEEEECSCEEESCTTSCHHHHTC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEeC-Cc-EEEEEE--CCCc--EEEc-CEEEECCCCCcCCCCCCchhcCc
Confidence 33343445689999999999987653 22 234444 3554 4677 69999999876655 3 344454
No 158
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=57.96 E-value=22 Score=29.00 Aligned_cols=51 Identities=14% Similarity=0.117 Sum_probs=35.3
Q ss_pred hcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH
Q psy17300 12 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 12 ~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l 70 (152)
..+.++++++++.|++|..+ ++. +.+...+|. .+.+ +.||+|+|..-+..+
T Consensus 218 l~~~Gv~i~~~~~V~~i~~~--~~~---v~v~~~~g~--~i~~-D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 218 FKKQGLTIRTGVRVTAVVPE--AKG---ARVELEGGE--VLEA-DRVLVAVGRRPYTEG 268 (455)
T ss_dssp HHHHTCEEECSCCEEEEEEE--TTE---EEEEETTSC--EEEE-SEEEECSCEEECCTT
T ss_pred HHHCCCEEEECCEEEEEEEe--CCE---EEEEECCCe--EEEc-CEEEECcCCCcCCCC
Confidence 34568999999999999766 332 333323453 4667 699999998866655
No 159
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=57.28 E-value=4 Score=33.31 Aligned_cols=49 Identities=16% Similarity=0.194 Sum_probs=32.7
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
.+|++++.|++|..++ +. ..|.+.+ .+| ..++| +.||+|+++-...+||
T Consensus 250 ~~i~~~~~V~~i~~~~--~~-~~v~~~~~~~g--~~~~a-d~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 250 DAAHVGARVEGLARED--GG-WRLIIEEHGRR--AELSV-AQVVLAAPAHATAKLL 299 (478)
T ss_dssp GGEESSEEEEEEECC----C-CEEEEEETTEE--EEEEC-SEEEECSCHHHHHHHH
T ss_pred hhEEcCCEEEEEEecC--Ce-EEEEEeecCCC--ceEEc-CEEEECCCHHHHHHHh
Confidence 4899999999998763 33 4555532 233 35777 6999999876555554
No 160
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=56.82 E-value=5.8 Score=33.33 Aligned_cols=56 Identities=18% Similarity=0.208 Sum_probs=37.8
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.+++++.++.|++|..+ +.. |.+.+ .+|....+.+ +.+|+|.|+ .|+.+-..|.
T Consensus 69 ~~~~i~~~~~~~V~~id~~--~~~---v~~~~~~~g~~~~~~~-d~lviAtG~--~p~~p~ipG~ 125 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRA--AKL---VTVRRLLDGSEYQESY-DTLLLSPGA--APIVPPIPGV 125 (565)
T ss_dssp HHHCCEEETTEEEEEEETT--TTE---EEEEETTTCCEEEEEC-SEEEECCCE--EECCCCCTTC
T ss_pred HhcCcEEEECCEEEEEECC--CCE---EEEEecCCCCeEEEEC-CEEEECCCC--CCCCCCCCCC
Confidence 3468999999999998655 333 34443 2466667777 699999998 4555544343
No 161
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=56.41 E-value=31 Score=31.73 Aligned_cols=60 Identities=15% Similarity=0.251 Sum_probs=43.4
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc----CCC-------cEEEEEeCcEEEEccCCc-cChHHHhh-CCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN----PQG-------KTIKVNANREVVLAANSI-NSVRILQQ-SGV 76 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~----~~g-------~~~~~~a~k~VIlaaGai-~tP~lLl~-Sgi 76 (152)
..++++++++.+.+|..+ ++++++|++.+ .+| .+..+.+ ..||+|.|.. .++.|+.. +|+
T Consensus 382 ~~Gv~~~~~~~~~~i~~~--~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~a-D~Vi~A~G~~~~~~~l~~~~~gl 454 (1025)
T 1gte_A 382 EEKCEFLPFLSPRKVIVK--GGRIVAVQFVRTEQDETGKWNEDEDQIVHLKA-DVVISAFGSVLRDPKVKEALSPI 454 (1025)
T ss_dssp HTTCEEECSEEEEEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEC-SEEEECSCEECCCHHHHHHTTTS
T ss_pred HcCCEEEeCCCceEEEcc--CCeEEEEEEEEeEEcCCCCcccCCCceEEEEC-CEEEECCCCCCCchhhhhcccCc
Confidence 468999999999998765 67888888752 233 3356778 6999999985 45666654 454
No 162
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=55.24 E-value=16 Score=31.01 Aligned_cols=60 Identities=13% Similarity=0.207 Sum_probs=42.6
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
+.....+.++++++++.|.+|.-+ +. +|.+. +|. .+.+ ..||+|.|..-+..+|...|+.
T Consensus 234 l~~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~--~g~--~i~~-D~Vi~a~G~~p~~~~l~~~g~~ 293 (588)
T 3ics_A 234 VHEHMKNHDVELVFEDGVDALEEN--GA---VVRLK--SGS--VIQT-DMLILAIGVQPESSLAKGAGLA 293 (588)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEGG--GT---EEEET--TSC--EEEC-SEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHcCCEEEECCeEEEEecC--CC---EEEEC--CCC--EEEc-CEEEEccCCCCChHHHHhcCce
Confidence 334445678999999999998644 23 34443 454 4667 6999999998887787777763
No 163
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=55.17 E-value=25 Score=28.78 Aligned_cols=44 Identities=27% Similarity=0.310 Sum_probs=29.3
Q ss_pred EEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCc
Q psy17300 18 QVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 65 (152)
Q Consensus 18 ~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai 65 (152)
+|++++.|++|..+. +.+ .|.+.+..+...+++| +.||+++..-
T Consensus 254 ~i~~~~~V~~I~~~~--~~v-~v~~~~~~~~~~~~~a-d~vI~t~p~~ 297 (498)
T 2iid_A 254 KVHFNAQVIKIQQND--QKV-TVVYETLSKETPSVTA-DYVIVCTTSR 297 (498)
T ss_dssp GEESSCEEEEEEECS--SCE-EEEEECSSSCCCEEEE-SEEEECSCHH
T ss_pred ccccCCEEEEEEECC--CeE-EEEEecCCcccceEEe-CEEEECCChH
Confidence 799999999998763 333 4555532221225678 6999998753
No 164
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=54.83 E-value=22 Score=30.93 Aligned_cols=55 Identities=15% Similarity=0.139 Sum_probs=38.2
Q ss_pred hhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 10 AIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 10 ~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
....+.++++++++.|++|.-+ ++.+.. .++....+.+ ..||+|+|..-+..++.
T Consensus 575 ~~l~~~GV~i~~~~~V~~i~~~-------~~~v~~~~~~~~~~i~a-D~VV~A~G~~p~~~l~~ 630 (690)
T 3k30_A 575 RRLIENGVARVTDHAVVAVGAG-------GVTVRDTYASIERELEC-DAVVMVTARLPREELYL 630 (690)
T ss_dssp HHHHHTTCEEEESEEEEEEETT-------EEEEEETTTCCEEEEEC-SEEEEESCEEECCHHHH
T ss_pred HHHHHCCCEEEcCcEEEEEECC-------eEEEEEccCCeEEEEEC-CEEEECCCCCCChHHHH
Confidence 3344678999999999998522 233332 2455567888 69999999987776554
No 165
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=53.92 E-value=31 Score=28.36 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=35.3
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+..+++++.++.|+.|..+ +. .|.+.+ .+|....+.+ +.+|+|.|+ .|+++
T Consensus 104 ~~~gv~~~~~~~v~~i~~~--~~---~v~v~~~~~g~~~~~~~-d~lviAtG~--~p~~p 155 (480)
T 3cgb_A 104 DKYGIDAKVRHEVTKVDTE--KK---IVYAEHTKTKDVFEFSY-DRLLIATGV--RPVMP 155 (480)
T ss_dssp HTTCCEEESSEEEEEEETT--TT---EEEEEETTTCCEEEEEC-SEEEECCCE--EECCC
T ss_pred hhcCCEEEeCCEEEEEECC--CC---EEEEEEcCCCceEEEEc-CEEEECCCC--cccCC
Confidence 4458999999999998655 33 344543 3465556777 699999996 45444
No 166
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=53.61 E-value=27 Score=29.27 Aligned_cols=62 Identities=13% Similarity=0.054 Sum_probs=39.8
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCC-CCeEEEEEEEcCCCc-EEEEEeCcEEEEccCCccChHH
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDET-KTKVTGVEFRNPQGK-TIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~-~~~~~gV~~~~~~g~-~~~~~a~k~VIlaaGai~tP~l 70 (152)
+.....+.++++++++.+.+|.-..+ +.....|.+.+.++. ...+.+ ..||+|.|..-+...
T Consensus 256 ~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~-D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 256 IGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEY-NTVMLAIGRDACTRK 319 (519)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEE-SEEEECSCEEESCSS
T ss_pred HHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEEC-CEEEEecCCcccCCC
Confidence 33444567899999999998864321 112234555544553 456778 599999998766554
No 167
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=53.57 E-value=16 Score=29.33 Aligned_cols=47 Identities=23% Similarity=0.321 Sum_probs=32.4
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
.+|.+++.|++|..+. +. +.+...+|. .+.| +.||+|+.+-...+||
T Consensus 248 ~~i~~~~~V~~i~~~~--~~---~~v~~~~g~--~~~a-d~vi~a~p~~~~~~l~ 294 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSG--SC---YSLELDNGV--TLDA-DSVIVTAPHKAAAGML 294 (470)
T ss_dssp EEEECSCCEEEEEECS--SS---EEEEESSSC--EEEE-SEEEECSCHHHHHHHT
T ss_pred CEEEeCCceEEEEEcC--Ce---EEEEECCCC--EEEC-CEEEECCCHHHHHHHc
Confidence 5899999999998773 32 333334564 3667 6899998776555554
No 168
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=53.32 E-value=9.9 Score=30.96 Aligned_cols=47 Identities=13% Similarity=0.226 Sum_probs=33.9
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
.+|.+++.|++|..+ ++. +.+...+| .+.| +.||+|+++-...+||.
T Consensus 249 ~~i~~~~~V~~i~~~--~~~---~~v~~~~g---~~~a-d~vV~a~p~~~~~~ll~ 295 (475)
T 3lov_A 249 SEIRLETPLLAISRE--DGR---YRLKTDHG---PEYA-DYVLLTIPHPQVVQLLP 295 (475)
T ss_dssp CEEESSCCCCEEEEE--TTE---EEEECTTC---CEEE-SEEEECSCHHHHHHHCT
T ss_pred CEEEcCCeeeEEEEe--CCE---EEEEECCC---eEEC-CEEEECCCHHHHHHHcC
Confidence 589999999999877 333 44443456 4777 69999988766666653
No 169
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=51.52 E-value=25 Score=28.68 Aligned_cols=41 Identities=20% Similarity=0.202 Sum_probs=29.0
Q ss_pred CcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCC
Q psy17300 16 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 64 (152)
Q Consensus 16 nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGa 64 (152)
+.+|.+++.|++|..+ ++.++ |.+ .+|. .++| +.||++++.
T Consensus 228 ~~~i~~~~~V~~i~~~--~~~v~-v~~--~~g~--~~~a-d~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYS--PGGVT-VKT--EDNS--VYSA-DYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEEC--SSCEE-EEE--TTSC--EEEE-SEEEECSCH
T ss_pred ccEEEcCCEEEEEEEc--CCcEE-EEE--CCCC--EEEc-CEEEEecCH
Confidence 4689999999999877 34443 443 4564 4667 689999874
No 170
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=51.21 E-value=31 Score=31.55 Aligned_cols=60 Identities=22% Similarity=0.197 Sum_probs=44.6
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc--C---CCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN--P---QGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~--~---~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
+.++++++++.|.+|.-++ ++++.+|.+.+ . +|....+.+ ..||+|.|..-+..++...+
T Consensus 328 ~~GV~v~~~~~v~~i~~~~-~~~v~~v~~~~~~~~~~~G~~~~i~~-D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 328 ADGVQVISGSVVVDTEADE-NGELSAIVVAELDEARELGGTQRFEA-DVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HTTCCEEETEEEEEEEECT-TSCEEEEEEEEECTTCCEEEEEEEEC-SEEEEECCEEECCHHHHHTT
T ss_pred hCCeEEEeCCEeEEEeccC-CCCEEEEEEEeccccCCCCceEEEEc-CEEEECCCcCcChHHHHhCC
Confidence 4689999999999987531 35678888874 2 254567888 59999999887777776554
No 171
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=51.20 E-value=8.6 Score=31.09 Aligned_cols=51 Identities=18% Similarity=0.292 Sum_probs=34.7
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
.+.++++++++.|++|..+ +.+ |.+ .+|. .+.. +.+|||.|+ .|+.+-..|
T Consensus 73 ~~~~i~~~~~~~V~~id~~--~~~---v~~--~~g~--~~~y-d~lvlAtG~--~p~~p~i~G 123 (385)
T 3klj_A 73 EKNNIKVITSEFATSIDPN--NKL---VTL--KSGE--KIKY-EKLIIASGS--IANKIKVPH 123 (385)
T ss_dssp HHTTCEEECSCCEEEEETT--TTE---EEE--TTSC--EEEC-SEEEECCCE--EECCCCCTT
T ss_pred HHCCCEEEeCCEEEEEECC--CCE---EEE--CCCC--EEEC-CEEEEecCC--CcCCCCCCC
Confidence 3568999999999999765 332 333 3554 3555 699999997 666554444
No 172
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=50.81 E-value=51 Score=24.67 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=31.5
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANS 64 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGa 64 (152)
++.....+.+++++. +.|++|..+ ++. +.+...++. .+.+ +.+|+|+|+
T Consensus 64 ~l~~~~~~~~v~~~~-~~v~~i~~~--~~~---~~v~~~~g~--~~~~-~~vv~AtG~ 112 (311)
T 2q0l_A 64 PWQEQCFRFGLKHEM-TAVQRVSKK--DSH---FVILAEDGK--TFEA-KSVIIATGG 112 (311)
T ss_dssp HHHHHHHTTSCEEEC-SCEEEEEEE--TTE---EEEEETTSC--EEEE-EEEEECCCE
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEEc--CCE---EEEEEcCCC--EEEC-CEEEECCCC
Confidence 344434456889988 789999876 332 223223454 4666 699999996
No 173
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=50.25 E-value=17 Score=30.74 Aligned_cols=61 Identities=13% Similarity=0.248 Sum_probs=40.4
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
+.....+.+++++.++.|++|..+ +.. |.+.+ .+|....+.+ +.+|+|.|+ .|.++-..|+
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~~--~~~---v~v~~~~~g~~~~~~~-d~lviAtG~--~p~~p~i~G~ 160 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINKE--EKT---ITIKNVTTNETYNEAY-DVLILSPGA--KPIVPSIPGI 160 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETT--TTE---EEEEETTTCCEEEEEC-SEEEECCCE--EECCCCCTTT
T ss_pred HHHHHHhcCcEEEECCEEEEEECC--CCE---EEEeecCCCCEEEEeC-CEEEECCCC--CCCCCCCCCc
Confidence 333444678999999999999765 332 44443 3466667777 699999997 4554433343
No 174
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=48.42 E-value=37 Score=25.37 Aligned_cols=58 Identities=19% Similarity=0.156 Sum_probs=35.1
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
++.....+.+++++. +.|++|..+. +. +.+...++. .+.+ +.+|+|+|+- |..+-..|
T Consensus 75 ~~~~~~~~~~v~~~~-~~v~~i~~~~--~~---~~v~~~~g~--~~~~-d~lvlAtG~~--~~~~~i~g 132 (323)
T 3f8d_A 75 VFNKHIEKYEVPVLL-DIVEKIENRG--DE---FVVKTKRKG--EFKA-DSVILGIGVK--RRKLGVPG 132 (323)
T ss_dssp HHHHHHHTTTCCEEE-SCEEEEEEC----C---EEEEESSSC--EEEE-EEEEECCCCE--ECCCCCTT
T ss_pred HHHHHHHHcCCEEEE-EEEEEEEecC--CE---EEEEECCCC--EEEc-CEEEECcCCC--CccCCCCc
Confidence 444444567888888 8999987663 22 223323444 4556 6899999987 54443333
No 175
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=47.87 E-value=25 Score=28.55 Aligned_cols=50 Identities=18% Similarity=0.242 Sum_probs=34.3
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.+++++.++.|++|..+ +. .|.+.+ .+|...++.+ +.+|+|.|+- |.++
T Consensus 68 ~~gv~~~~~~~v~~i~~~--~~---~v~~~~~~~g~~~~~~~-d~lviAtG~~--p~~p 118 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPK--EH---QVTVKDLVSGEERVENY-DKLIISPGAV--PFEL 118 (447)
T ss_dssp HTTCEEEETEEEEEEETT--TT---EEEEEETTTCCEEEEEC-SEEEECCCEE--ECCC
T ss_pred HCCCEEEECCEEEEEeCC--CC---EEEEEecCCCceEEEeC-CEEEEcCCCC--cCCC
Confidence 457899999999998655 33 344543 3465556777 6999999963 5444
No 176
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=47.55 E-value=72 Score=25.67 Aligned_cols=62 Identities=13% Similarity=0.165 Sum_probs=40.6
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEE--cCCCc---EEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFR--NPQGK---TIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~--~~~g~---~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.....+.++++++++.|++|. ++. +.+. +.+|. ..++.+ ..++++.|....+.+...+|+
T Consensus 213 ~~~~~l~~~gI~~~~~~~v~~v~----~~~---v~~~~~~~~g~~~~~~~i~~-D~vv~~~g~~~~~~~~~~~gl 279 (437)
T 3sx6_A 213 ILTKGLKEEGIEAYTNCKVTKVE----DNK---MYVTQVDEKGETIKEMVLPV-KFGMMIPAFKGVPAVAGVEGL 279 (437)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEE----TTE---EEEEEECTTSCEEEEEEEEC-SEEEEECCEECCHHHHTSTTT
T ss_pred HHHHHHHHCCCEEEcCCEEEEEE----CCe---EEEEecccCCccccceEEEE-eEEEEcCCCcCchhhhccccc
Confidence 44444556799999999999984 222 3333 23443 456777 589999887776655545665
No 177
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=46.41 E-value=61 Score=25.56 Aligned_cols=48 Identities=19% Similarity=0.121 Sum_probs=34.0
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
.+|..++.|+.|..++ +. |.+...+|. .+.+ +.||.|.|.-..-+-.+
T Consensus 140 ~~i~~~~~v~~i~~~~--~~---v~v~~~~g~--~~~a-~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDA--DG---VTVWFTDGS--SASG-DLLIAADGSHSALRPWV 187 (407)
T ss_dssp GGEEESCCEEEEEEET--TE---EEEEETTSC--EEEE-SEEEECCCTTCSSHHHH
T ss_pred CEEEECCEEEEEEecC--Cc---EEEEEcCCC--EEee-CEEEECCCcChHHHHHh
Confidence 7899999999998873 33 334334564 5777 68999988876665554
No 178
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=46.18 E-value=30 Score=28.99 Aligned_cols=54 Identities=22% Similarity=0.296 Sum_probs=34.7
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCc
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSI 65 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai 65 (152)
++.....+.+++++.++.|++|..+.+++....|.+ .+|. .+++ +.||+|.|+-
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~--~~g~--~~~~-d~vVlAtG~~ 325 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIET--ASGA--VLKA-RSIIIATGAK 325 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEE--TTSC--EEEE-EEEEECCCEE
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEE--CCCC--EEEc-CEEEECCCCC
Confidence 444444567899999999999976532122233433 3453 4666 6999999973
No 179
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=46.12 E-value=25 Score=30.53 Aligned_cols=52 Identities=15% Similarity=0.159 Sum_probs=37.5
Q ss_pred hhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 11 IKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 11 ~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
...+.++++++++.|++|. + + ++.+. .+|.+..+.+ ..||+|.|..-+..++
T Consensus 582 ~l~~~GV~v~~~~~v~~i~--~-~----~v~~~-~~G~~~~i~~-D~Vi~a~G~~p~~~l~ 633 (671)
T 1ps9_A 582 TLLSRGVKMIPGVSYQKID--D-D----GLHVV-INGETQVLAV-DNVVICAGQEPNRALA 633 (671)
T ss_dssp HHHHTTCEEECSCEEEEEE--T-T----EEEEE-ETTEEEEECC-SEEEECCCEEECCTTH
T ss_pred HHHhcCCEEEeCcEEEEEe--C-C----eEEEe-cCCeEEEEeC-CEEEECCCccccHHHH
Confidence 3345789999999999975 2 2 24443 3666667888 5999999988766655
No 180
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=46.09 E-value=75 Score=27.48 Aligned_cols=44 Identities=14% Similarity=0.170 Sum_probs=30.5
Q ss_pred CcEEEcCcEEEEEEEeCCCCeEEEEEEEcC--CCcEEEEEeCcEEEEccC
Q psy17300 16 TVQVSKNSEVTKLCFDETKTKVTGVEFRNP--QGKTIKVNANREVVLAAN 63 (152)
Q Consensus 16 nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~--~g~~~~~~a~k~VIlaaG 63 (152)
.++|.+++.|++|..+. +. ..|.+.+. .+...++.| +.||++..
T Consensus 410 ~l~I~l~~~V~~I~~~~--~~-v~V~~~~~~~~~~~~~~~A-d~VI~tvP 455 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTA--SG-CEVIAVNTRSTSQTFIYKC-DAVLCTLP 455 (662)
T ss_dssp TCEEETTEEEEEEEEET--TE-EEEEEEESSCTTCEEEEEE-SEEEECCC
T ss_pred cCceecCCeEEEEEECC--Cc-EEEEEeecccCCCCeEEEe-CEEEECCC
Confidence 57999999999999884 33 34555541 233456888 68888764
No 181
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=45.79 E-value=53 Score=26.07 Aligned_cols=54 Identities=17% Similarity=0.036 Sum_probs=38.2
Q ss_pred CCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhh
Q psy17300 15 NTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQ 73 (152)
Q Consensus 15 ~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~ 73 (152)
++.+++.++.|++|.. + ++ + .|.+.+ .+|.+.++++ +.||.|.|+-...|=++.
T Consensus 122 g~~~v~~~~~v~~i~~-~-~~-v-~v~~~~~~~g~~~~~~a-d~vV~AdG~~S~vR~~l~ 176 (410)
T 3c96_A 122 GQQAVRTGLGVERIEE-R-DG-R-VLIGARDGHGKPQALGA-DVLVGADGIHSAVRAHLH 176 (410)
T ss_dssp CTTSEEESEEEEEEEE-E-TT-E-EEEEEEETTSCEEEEEE-SEEEECCCTTCHHHHHHC
T ss_pred CCcEEEECCEEEEEec-C-Cc-c-EEEEecCCCCCceEEec-CEEEECCCccchhHHHhc
Confidence 3468999999999976 3 33 2 355553 2466567888 699999998777766553
No 182
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=45.64 E-value=83 Score=26.54 Aligned_cols=62 Identities=13% Similarity=0.082 Sum_probs=39.6
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEe-----CC--CCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFD-----ET--KTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~-----~~--~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.....+.++++++++.+.+|.-. .+ .+++ .|.+...+|.+..+.+ ..||+|.|..-+..+|
T Consensus 332 ~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~~~-D~vi~a~G~~p~~~~l 400 (598)
T 2x8g_A 332 VGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHYTDGKKFEEEF-ETVIFAVGREPQLSKV 400 (598)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEETTSCEEEEEE-SEEEECSCEEECGGGT
T ss_pred HHHHHHhCCCEEEECCeEEEEEeccccccccCCCceE-EEEEEeCCCcEEeccC-CEEEEEeCCccccCcc
Confidence 333344578999999998887532 11 1332 2343334676666668 5999999988776664
No 183
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=45.59 E-value=24 Score=28.35 Aligned_cols=48 Identities=21% Similarity=0.178 Sum_probs=32.5
Q ss_pred CcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 16 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 16 nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.+|++++.|++|..+ ++.. |.+. .++. .+.| +.||+|++.-...+|+
T Consensus 226 g~~i~~~~~V~~i~~~--~~~~--v~v~-~~~~--~~~a-d~VI~a~p~~~~~~l~ 273 (453)
T 2yg5_A 226 GDDVFLNAPVRTVKWN--ESGA--TVLA-DGDI--RVEA-SRVILAVPPNLYSRIS 273 (453)
T ss_dssp GGGEECSCCEEEEEEE--TTEE--EEEE-TTTE--EEEE-EEEEECSCGGGGGGSE
T ss_pred CCcEEcCCceEEEEEe--CCce--EEEE-ECCe--EEEc-CEEEEcCCHHHHhcCE
Confidence 3589999999999877 3432 3344 2443 5677 6999998875544443
No 184
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.51 E-value=23 Score=28.97 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=36.9
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l 70 (152)
+.....+.++++++++.|++|.- +. +.+...+|....+.+ ..||+|.|..-+..+
T Consensus 218 l~~~l~~~gv~i~~~~~v~~i~~----~~---v~v~~~~G~~~~i~~-D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 218 VAESLKKLGIALHLGHSVEGYEN----GC---LLANDGKGGQLRLEA-DRVLVAVGRRPRTKG 272 (458)
T ss_dssp HHHHHHHHTCEEETTCEEEEEET----TE---EEEECSSSCCCEECC-SCEEECCCEEECCSS
T ss_pred HHHHHHHCCCEEEECCEEEEEEe----CC---EEEEECCCceEEEEC-CEEEECcCCCcCCCC
Confidence 33334456899999999999852 22 344433454456777 589999998766655
No 185
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.46 E-value=15 Score=29.26 Aligned_cols=58 Identities=21% Similarity=0.334 Sum_probs=40.8
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
++.....+.++++++++.|.++. . . +|.+. +|. +.+ ..||+|.|..-+..+|..+|+.
T Consensus 188 ~l~~~l~~~gV~i~~~~~v~~i~--~--~---~v~~~--~g~---i~~-D~vi~a~G~~p~~~ll~~~gl~ 245 (367)
T 1xhc_A 188 MIKDMLEETGVKFFLNSELLEAN--E--E---GVLTN--SGF---IEG-KVKICAIGIVPNVDLARRSGIH 245 (367)
T ss_dssp HHHHHHHHTTEEEECSCCEEEEC--S--S---EEEET--TEE---EEC-SCEEEECCEEECCHHHHHTTCC
T ss_pred HHHHHHHHCCCEEEcCCEEEEEE--e--e---EEEEC--CCE---EEc-CEEEECcCCCcCHHHHHhCCCC
Confidence 44444456789999999999985 1 1 34442 442 777 6999999988777777777664
No 186
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=44.35 E-value=26 Score=28.64 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=32.7
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
.+.+++++.++.|++|..+ +.. +.+.+ .+|....+.+ +.+|+|+|+ .|+++
T Consensus 77 ~~~gi~~~~~~~V~~id~~--~~~---v~~~~~~~g~~~~~~~-d~lviAtG~--~p~~p 128 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRA--AHT---VEIENLRTGERRTLKY-DKLVLALGS--KANRP 128 (472)
T ss_dssp ----CEEECSEEEEEEETT--TTE---EEEEETTTCCEEEEEC-SEEEECCCE--EECCC
T ss_pred hhcCcEEEECCEEEEEECC--CCE---EEEeecCCCCEEEEEC-CEEEEeCCC--CcCCC
Confidence 3578999999999998655 332 34443 3466667777 699999997 45444
No 187
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=43.67 E-value=67 Score=29.15 Aligned_cols=43 Identities=14% Similarity=0.185 Sum_probs=29.9
Q ss_pred CcEEEcCcEEEEEEEeCCCCeEEEEEEEcC--CCcEEEEEeCcEEEEcc
Q psy17300 16 TVQVSKNSEVTKLCFDETKTKVTGVEFRNP--QGKTIKVNANREVVLAA 62 (152)
Q Consensus 16 nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~--~g~~~~~~a~k~VIlaa 62 (152)
.+.|++++.|++|..+. +.+ .|.+.+. .+...++.| +.||++.
T Consensus 581 ~l~I~Lnt~V~~I~~~~--~gV-~V~~~~~~~~~~g~~i~A-D~VIvTv 625 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTA--SGC-EVIAVNTRSTSQTFIYKC-DAVLCTL 625 (852)
T ss_dssp TCCEECSEEEEEEEEET--TEE-EEEEEESSSTTCEEEEEE-SEEEECC
T ss_pred CCCEEeCCeEEEEEEcC--CcE-EEEEeecccCCCCeEEEC-CEEEECC
Confidence 46899999999999884 333 4556541 223457888 6888876
No 188
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=43.40 E-value=13 Score=30.74 Aligned_cols=48 Identities=19% Similarity=0.105 Sum_probs=32.6
Q ss_pred CcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 16 TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 16 nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
+.+|.+++.|++|..+ ++.++ |.+ .+|+ .+.| +.||++++.-...+|+
T Consensus 226 g~~i~~~~~V~~i~~~--~~~v~-v~~--~~g~--~~~a-d~VI~a~p~~~l~~l~ 273 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQT--RENVL-VET--LNHE--MYEA-KYVISAIPPTLGMKIH 273 (520)
T ss_dssp GGGEESSCCEEEEECS--SSSEE-EEE--TTSC--EEEE-SEEEECSCGGGGGGSE
T ss_pred CCcEEcCCeeEEEEEC--CCeEE-EEE--CCCe--EEEe-CEEEECCCHHHHccee
Confidence 4679999999999876 34443 443 4564 3667 6999998875544443
No 189
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=42.80 E-value=31 Score=28.48 Aligned_cols=57 Identities=12% Similarity=0.133 Sum_probs=39.0
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
++.....+.++++++++.|++|.- ++++..|.. +|. .+.+ ..||+|+|..-+..+|.
T Consensus 241 ~l~~~l~~~GV~i~~~~~v~~i~~---~~~v~~v~~---~g~--~i~~-D~Vi~a~G~~p~~~ll~ 297 (490)
T 2bc0_A 241 LMAKNMEEHGIQLAFGETVKEVAG---NGKVEKIIT---DKN--EYDV-DMVILAVGFRPNTTLGN 297 (490)
T ss_dssp HHHHHHHTTTCEEEETCCEEEEEC---SSSCCEEEE---SSC--EEEC-SEEEECCCEEECCGGGT
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEc---CCcEEEEEE---CCc--EEEC-CEEEECCCCCcChHHHH
Confidence 344444567999999999999864 233444443 343 4677 59999999887766553
No 190
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=41.19 E-value=47 Score=26.23 Aligned_cols=51 Identities=22% Similarity=0.209 Sum_probs=35.8
Q ss_pred CCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhh
Q psy17300 15 NTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQ 73 (152)
Q Consensus 15 ~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~ 73 (152)
++++++.++.|++|..++ +.++ |.+ .+|. .+++ +.||.|.|.-...|-++.
T Consensus 110 ~~~~i~~~~~v~~i~~~~--~~v~-v~~--~~g~--~~~a-d~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDS--ETVQ-MRF--SDGT--KAEA-NWVIGADGGASVVRKRLL 160 (397)
T ss_dssp CSTTEETTCCEEEEEECS--SCEE-EEE--TTSC--EEEE-SEEEECCCTTCHHHHHHH
T ss_pred CCcEEEcCCEEEEEEecC--CEEE-EEE--CCCC--EEEC-CEEEECCCcchhHHHHhc
Confidence 478999999999998763 3332 444 3554 4677 699999998766665554
No 191
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=41.03 E-value=42 Score=27.70 Aligned_cols=52 Identities=6% Similarity=0.016 Sum_probs=39.0
Q ss_pred CCcEEEcCcEEEEEEEeCCCC-eEEEEEEEcC-------------CCcEEEEEeCcEEEEccCCccCh
Q psy17300 15 NTVQVSKNSEVTKLCFDETKT-KVTGVEFRNP-------------QGKTIKVNANREVVLAANSINSV 68 (152)
Q Consensus 15 ~nl~l~~~~~V~ri~~~~~~~-~~~gV~~~~~-------------~g~~~~~~a~k~VIlaaGai~tP 68 (152)
.++++.+++.+.+|.-++ ++ ++.+|.+.+. +|....+.+ ..||+|.|..-++
T Consensus 270 ~gv~~~~~~~~~~i~~~~-~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~-d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSP-DGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPC-GLVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECT-TSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEEC-SEEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCC-CCceEEEEEEEEEEEccccCCCcccCCCceEEEEc-CEEEECCCCCCCC
Confidence 679999999999986542 25 7888887531 344467888 6999999988877
No 192
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=37.40 E-value=41 Score=27.24 Aligned_cols=57 Identities=19% Similarity=0.188 Sum_probs=38.0
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
++.....+.++++++++.|++|..+ +++..|.. ++. .+.+ +.||+|.|..-+..+|.
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~~---~~v~~v~~---~~~--~i~~-d~vi~a~G~~p~~~~~~ 252 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEGD---GRVQKVVT---DKN--AYDA-DLVVVAVGVRPNTAWLK 252 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEECS---SBCCEEEE---SSC--EEEC-SEEEECSCEEESCGGGT
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEcc---CcEEEEEE---CCC--EEEC-CEEEECcCCCCChHHHH
Confidence 3444445678999999999998643 33434443 332 4777 69999999876655543
No 193
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=37.18 E-value=48 Score=26.98 Aligned_cols=54 Identities=9% Similarity=0.121 Sum_probs=36.4
Q ss_pred HHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHH
Q psy17300 8 LRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRI 70 (152)
Q Consensus 8 l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~l 70 (152)
+.....+.++++++++.|++|..+ +.. ..|.+ ++ ..+.+ ..||+|+|..-+...
T Consensus 222 l~~~l~~~Gv~i~~~~~v~~i~~~--~~~-~~v~~---~~--~~i~a-D~Vv~a~G~~p~~~~ 275 (467)
T 1zk7_A 222 VTAAFRAEGIEVLEHTQASQVAHM--DGE-FVLTT---TH--GELRA-DKLLVATGRTPNTRS 275 (467)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEEE--TTE-EEEEE---TT--EEEEE-SEEEECSCEEESCTT
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEe--CCE-EEEEE---CC--cEEEc-CEEEECCCCCcCCCc
Confidence 333344578999999999999765 332 23333 23 25777 699999998766554
No 194
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=35.93 E-value=36 Score=25.69 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=31.0
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANS 64 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGa 64 (152)
++.....+.+++++.++ |+++..+ +..+ .+...+ .++ ..+.+ +.+|+|.|+
T Consensus 89 ~~~~~~~~~gv~i~~~~-v~~i~~~--~~~~-~v~~~~~~~~--~~~~~-d~vvlAtG~ 140 (338)
T 3itj_A 89 RMREQSTKFGTEIITET-VSKVDLS--SKPF-KLWTEFNEDA--EPVTT-DAIILATGA 140 (338)
T ss_dssp HHHHHHHHTTCEEECSC-EEEEECS--SSSE-EEEETTCSSS--CCEEE-EEEEECCCE
T ss_pred HHHHHHHHcCCEEEEeE-EEEEEEc--CCEE-EEEEEecCCC--cEEEe-CEEEECcCC
Confidence 44444445689999999 9998765 3332 222211 123 33555 689999998
No 195
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=35.57 E-value=1.3e+02 Score=22.21 Aligned_cols=58 Identities=21% Similarity=0.218 Sum_probs=43.3
Q ss_pred hcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 12 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 12 ~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
....+...+..+.+.++.-. +....++.+.+ ..+....+.+ ..|++|.|..-+..+|-
T Consensus 198 ~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~i~~-d~vi~a~G~~pn~~~l~ 256 (314)
T 4a5l_A 198 LNHPKIEVIWNSELVELEGD--GDLLNGAKIHNLVSGEYKVVPV-AGLFYAIGHSPNSKFLG 256 (314)
T ss_dssp HTCTTEEEECSEEEEEEEES--SSSEEEEEEEETTTCCEEEEEC-SEEEECSCEEESCGGGT
T ss_pred hcccceeeEeeeeeEEEEee--eeccceeEEeecccccceeecc-ccceEecccccChhHhc
Confidence 34667888999999888765 45677888775 3455677888 69999999887777664
No 196
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=34.68 E-value=15 Score=30.45 Aligned_cols=59 Identities=19% Similarity=0.130 Sum_probs=37.8
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-------C---------CCcEEEEEeCcEEEEccCCccChH--HHhhCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-------P---------QGKTIKVNANREVVLAANSINSVR--ILQQSG 75 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-------~---------~g~~~~~~a~k~VIlaaGai~tP~--lLl~Sg 75 (152)
..++++++++.+.+|.- ++++++|.+.+ . +|.+..+.+ ..||+|.|.--++. +|..+|
T Consensus 314 ~~Gv~~~~~~~~~~i~~---~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~a-D~Vi~A~G~~p~~~~~~l~~~g 389 (456)
T 2vdc_G 314 EEGVEFIWQAAPEGFTG---DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQA-DLVIKALGFEPEDLPNAFDEPE 389 (456)
T ss_dssp HTTCEEECCSSSCCEEE---EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEEC-SEEEECSCEECCCHHHHHHSTT
T ss_pred HCCCEEEeCCCceEEeC---CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEEC-CEEEECCCCCCCcchhhcccCC
Confidence 46799999999988863 24555555531 1 234467888 69999999754444 344344
Q ss_pred C
Q psy17300 76 V 76 (152)
Q Consensus 76 i 76 (152)
+
T Consensus 390 l 390 (456)
T 2vdc_G 390 L 390 (456)
T ss_dssp S
T ss_pred e
Confidence 3
No 197
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=34.50 E-value=32 Score=28.52 Aligned_cols=55 Identities=13% Similarity=0.105 Sum_probs=40.3
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
+.++++++++.|.+|.-+ +++.+|.. .+| ..+.+ +.||+|+|..-+..++..+|+
T Consensus 269 ~~GV~v~~~~~v~~i~~~---~~v~~v~~--~~g--~~i~a-D~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 269 RWGIDYVHIPNVKRVEGN---EKVERVID--MNN--HEYKV-DALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHTCEEEECSSEEEEECS---SSCCEEEE--TTC--CEEEC-SEEEECCCEEECCHHHHHTTC
T ss_pred hCCcEEEeCCeeEEEecC---CceEEEEe--CCC--eEEEe-CEEEECCCcCcCchHHHhcCC
Confidence 457999999999998643 23445553 345 34677 699999999888788877776
No 198
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=34.32 E-value=43 Score=27.68 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=26.8
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccC
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAAN 63 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaG 63 (152)
.+|++++.|++|..+. +. ...|.+ .+|. .++| +.||+++.
T Consensus 215 ~~i~~~~~V~~I~~~~-~~-~v~v~~--~~g~--~~~a-d~VI~t~p 254 (516)
T 1rsg_A 215 NWLKLSCEVKSITREP-SK-NVTVNC--EDGT--VYNA-DYVIITVP 254 (516)
T ss_dssp GGEETTCCEEEEEECT-TS-CEEEEE--TTSC--EEEE-EEEEECCC
T ss_pred CEEEECCEEEEEEEcC-CC-eEEEEE--CCCc--EEEC-CEEEECCC
Confidence 4699999999998752 22 234444 4564 3667 68888874
No 199
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=33.93 E-value=48 Score=26.89 Aligned_cols=55 Identities=16% Similarity=0.199 Sum_probs=35.4
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.+++++.++.|++|..+ ...+ .+. .......+.+ +.+|+|.|+ .|.++-..|.
T Consensus 69 ~~~gi~~~~~~~V~~id~~--~~~v---~v~-~~~~~~~~~~-d~lviAtG~--~p~~p~i~g~ 123 (452)
T 3oc4_A 69 RRQKIQLLLNREVVAMDVE--NQLI---AWT-RKEEQQWYSY-DKLILATGA--SQFSTQIRGS 123 (452)
T ss_dssp HHTTEEEECSCEEEEEETT--TTEE---EEE-ETTEEEEEEC-SEEEECCCC--CBCCCCCBTT
T ss_pred HHCCCEEEECCEEEEEECC--CCEE---EEE-ecCceEEEEc-CEEEECCCc--ccCCCCCCCC
Confidence 3467899999999998765 3332 222 1223456777 689999998 5655543343
No 200
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=33.54 E-value=58 Score=25.47 Aligned_cols=48 Identities=23% Similarity=0.102 Sum_probs=33.6
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
+.+++++.++.|++|.. ++ .|.+ .+|. ++++ +.||.|.|.-...+-++
T Consensus 119 ~~gv~i~~~~~v~~i~~--~~----~v~~--~~g~--~~~a-d~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 119 ALGVDISVNSEAVAADP--VG----RLTL--QTGE--VLEA-DLIVGADGVGSKVRDSI 166 (379)
T ss_dssp HTTCEEESSCCEEEEET--TT----EEEE--TTSC--EEEC-SEEEECCCTTCHHHHHH
T ss_pred hcCCEEEeCCEEEEEEe--CC----EEEE--CCCC--EEEc-CEEEECCCccHHHHHHh
Confidence 45899999999999865 23 3444 3454 4777 69999999876554443
No 201
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=33.51 E-value=59 Score=26.26 Aligned_cols=60 Identities=22% Similarity=0.236 Sum_probs=40.1
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
.+.....+. +++++++.|.++.-+ + ++..+ .. ++ ..+.+ ..||+|.|..-+..+|...|+
T Consensus 195 ~l~~~l~~~-v~i~~~~~v~~i~~~--~-~v~~v-~~--~g--~~i~~-D~Vv~a~G~~p~~~l~~~~gl 254 (449)
T 3kd9_A 195 ILEEKLKKH-VNLRLQEITMKIEGE--E-RVEKV-VT--DA--GEYKA-ELVILATGIKPNIELAKQLGV 254 (449)
T ss_dssp HHHHHHTTT-SEEEESCCEEEEECS--S-SCCEE-EE--TT--EEEEC-SEEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHhC-cEEEeCCeEEEEecc--C-cEEEE-Ee--CC--CEEEC-CEEEEeeCCccCHHHHHhCCc
Confidence 343444455 999999999998643 2 33333 22 34 35777 699999999877777776665
No 202
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=31.94 E-value=82 Score=25.38 Aligned_cols=49 Identities=20% Similarity=0.220 Sum_probs=32.1
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHh
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQ 72 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl 72 (152)
.+.+++++.++.|+++..+ + ..+. .++....+.+ +.+|+|.|+ .|+++-
T Consensus 70 ~~~gi~v~~~~~v~~i~~~--~-----~~v~-~~~g~~~~~~-d~lviAtG~--~p~~p~ 118 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTG--Y-----VRVR-ENGGEKSYEW-DYLVFANGA--SPQVPA 118 (449)
T ss_dssp HHTTCEEETTCEEEEECSS--E-----EEEE-CSSSEEEEEC-SEEEECCCE--EECCCS
T ss_pred HhcCcEEEecCEEEEEecC--C-----CEEE-ECCceEEEEc-CEEEECCCC--CCCCCC
Confidence 3578999999999998433 1 2223 2344456777 699999996 454443
No 203
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=31.36 E-value=1.1e+02 Score=24.78 Aligned_cols=54 Identities=22% Similarity=0.262 Sum_probs=33.3
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
++.....+.+++++.+ .|..+. . . .+.+...+|.+..+.+ +.+|+|.|+ .|+.+
T Consensus 94 ~~~~~~~~~~v~~~~g-~v~~id--~--~---~~~V~~~~g~~~~~~~-d~lviAtG~--~p~~p 147 (466)
T 3l8k_A 94 HKRNMSQYETLTFYKG-YVKIKD--P--T---HVIVKTDEGKEIEAET-RYMIIASGA--ETAKL 147 (466)
T ss_dssp HHHHHTTCTTEEEESE-EEEEEE--T--T---EEEEEETTSCEEEEEE-EEEEECCCE--EECCC
T ss_pred hHHHHHHhCCCEEEEe-EEEEec--C--C---eEEEEcCCCcEEEEec-CEEEECCCC--CccCC
Confidence 3444556778998887 566553 2 2 2334434566655777 699999997 45444
No 204
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=31.02 E-value=52 Score=26.75 Aligned_cols=52 Identities=19% Similarity=0.289 Sum_probs=33.1
Q ss_pred cCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 13 DKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 13 ~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
++.++++++++.|++|..+ ...+ .+... ..+....+.. +.+|||+|+ +|+.+
T Consensus 68 ~~~~i~~~~~~~V~~id~~--~~~~-~~~~~-~~~~~~~~~y-d~lVIATGs--~p~~p 119 (437)
T 4eqs_A 68 DRKQITVKTYHEVIAINDE--RQTV-SVLNR-KTNEQFEESY-DKLILSPGA--SANSL 119 (437)
T ss_dssp HHHCCEEEETEEEEEEETT--TTEE-EEEET-TTTEEEEEEC-SEEEECCCE--EECCC
T ss_pred HhcCCEEEeCCeEEEEEcc--CcEE-EEEec-cCCceEEEEc-CEEEECCCC--ccccc
Confidence 3457899999999998654 2222 22221 2344556666 689999997 35543
No 205
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=30.44 E-value=61 Score=27.41 Aligned_cols=49 Identities=6% Similarity=0.198 Sum_probs=32.3
Q ss_pred hhHHhhhcCCCcEEEc--CcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccCh
Q psy17300 6 IFLRAIKDKNTVQVSK--NSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSV 68 (152)
Q Consensus 6 ~~l~~~~~~~nl~l~~--~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP 68 (152)
.|+. +.+++|++++. +..|++|.-+ ||.. .+| .+.+ ..||+|+|.=-++
T Consensus 343 ~y~~-al~~~nV~lv~~~~~~I~~it~~-------gv~~--~dG---~~~~-D~IV~ATGf~~~~ 393 (545)
T 3uox_A 343 NYYE-TYNRDNVHLVDIREAPIQEVTPE-------GIKT--ADA---AYDL-DVIIYATGFDAVT 393 (545)
T ss_dssp SHHH-HTTSTTEEEEETTTSCEEEEETT-------EEEE--SSC---EEEC-SEEEECCCCBSSS
T ss_pred cHHH-HhcCCCEEEEecCCCCceEEccC-------eEEe--CCC---eeec-CEEEECCcccccc
Confidence 3554 45689999996 7888887421 4554 356 3566 5888988875443
No 206
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=30.10 E-value=74 Score=27.62 Aligned_cols=17 Identities=18% Similarity=0.237 Sum_probs=14.9
Q ss_pred CcEEEcCcEEEEEEEeC
Q psy17300 16 TVQVSKNSEVTKLCFDE 32 (152)
Q Consensus 16 nl~l~~~~~V~ri~~~~ 32 (152)
+++|..++.|+.+..++
T Consensus 136 ~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 136 RIKVERPLIPEKMEIDS 152 (665)
T ss_dssp SSCEECSEEEEEEEECG
T ss_pred ceEEEeCCEEEEEEecC
Confidence 58999999999998874
No 207
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=29.94 E-value=75 Score=25.67 Aligned_cols=54 Identities=9% Similarity=0.143 Sum_probs=35.3
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEc-CCCcEEEEEeCcEEEEccCCccChHHHhhCC
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRN-PQGKTIKVNANREVVLAANSINSVRILQQSG 75 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~-~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sg 75 (152)
+.+++++.++.|+.|..+ +. .|.+.+ .++....+.+ +.+|+|.|+ .|+++-..|
T Consensus 70 ~~gv~~~~~~~v~~i~~~--~~---~v~v~~~~~g~~~~~~~-d~lviAtGs--~p~~p~i~g 124 (452)
T 2cdu_A 70 NLGANVQMRHQVTNVDPE--TK---TIKVKDLITNEEKTEAY-DKLIMTTGS--KPTVPPIPG 124 (452)
T ss_dssp HTTCEEEESEEEEEEEGG--GT---EEEEEETTTCCEEEEEC-SEEEECCCE--EECCCCCTT
T ss_pred HcCCEEEeCCEEEEEEcC--CC---EEEEEecCCCceEEEEC-CEEEEccCC--CcCCCCCCC
Confidence 467899999999998765 33 344543 2343456777 699999996 454443333
No 208
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=29.55 E-value=73 Score=26.31 Aligned_cols=48 Identities=17% Similarity=0.149 Sum_probs=32.2
Q ss_pred CCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCcc
Q psy17300 14 KNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSIN 66 (152)
Q Consensus 14 ~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~ 66 (152)
+.++++++++.|.+|..+ +..+.-+.. .++....+.+ +.+|||.|+..
T Consensus 172 ~~~v~~~~~~~v~~i~~~--~~~~~~~~~--~~~~~~~~~~-d~lvlAtGa~~ 219 (493)
T 1y56_A 172 NENTKIYLETSALGVFDK--GEYFLVPVV--RGDKLIEILA-KRVVLATGAID 219 (493)
T ss_dssp CTTEEEETTEEECCCEEC--SSSEEEEEE--ETTEEEEEEE-SCEEECCCEEE
T ss_pred hcCCEEEcCCEEEEEEcC--CcEEEEEEe--cCCeEEEEEC-CEEEECCCCCc
Confidence 578999999999988765 332222221 2444456777 68999999753
No 209
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=29.53 E-value=52 Score=27.09 Aligned_cols=50 Identities=12% Similarity=0.031 Sum_probs=37.1
Q ss_pred CCcEEEcCcEEEEEEEeCCCCeEEEEEEEc--------------CCCcEEEEEeCcEEEEccCCccCh
Q psy17300 15 NTVQVSKNSEVTKLCFDETKTKVTGVEFRN--------------PQGKTIKVNANREVVLAANSINSV 68 (152)
Q Consensus 15 ~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~--------------~~g~~~~~~a~k~VIlaaGai~tP 68 (152)
.++++++++.+.+|.-+ +++.+|.+.+ .+|....+.+ ..||+|.|...++
T Consensus 265 ~gv~i~~~~~~~~i~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~-d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK---RKVERIVLGRNELVSDGSGRVAAKDTGEREELPA-QLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS---SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEEC-SEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC---CcEeEEEEEEEEecCCCcccccccCCCceEEEEc-CEEEEccccccCC
Confidence 67999999999998633 3566777652 1344456888 6999999998887
No 210
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=28.45 E-value=39 Score=24.94 Aligned_cols=56 Identities=13% Similarity=0.215 Sum_probs=37.0
Q ss_pred hhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 10 AIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 10 ~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
....+.+++++. +.|.+|.-+ + +|.+. +|. .+.+ ..||+|.|..-++.+|..+|+.
T Consensus 182 ~~l~~~gv~i~~-~~v~~i~~~--~----~v~~~--~g~--~~~~-D~vi~a~G~~p~~~~~~~~g~~ 237 (297)
T 3fbs_A 182 ALLAARGVRVET-TRIREIAGH--A----DVVLA--DGR--SIAL-AGLFTQPKLRITVDWIEKLGCA 237 (297)
T ss_dssp HHHHHTTCEEEC-SCEEEEETT--E----EEEET--TSC--EEEE-SEEEECCEEECCCSCHHHHTCC
T ss_pred HHHHHCCcEEEc-ceeeeeecC--C----eEEeC--CCC--EEEE-EEEEEccCcccCchhHHhcCCc
Confidence 334467899986 888887522 2 55553 554 4566 5899999988666677666653
No 211
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=28.12 E-value=1.1e+02 Score=23.27 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=38.4
Q ss_pred HHhhhcCC-CcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 8 LRAIKDKN-TVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 8 l~~~~~~~-nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
+.....+. ++++++++.|.+|.-+ ++. ..|.+ .+|.+ +.+...||+|.|..-+..+|..+++
T Consensus 220 l~~~l~~~g~v~~~~~~~v~~i~~~--~~~-~~v~~--~~g~~--~~~~d~vi~a~G~~~~~~~~~~~~~ 282 (369)
T 3d1c_A 220 LGNVIKQGARIEMNVHYTVKDIDFN--NGQ-YHISF--DSGQS--VHTPHEPILATGFDATKNPIVQQLF 282 (369)
T ss_dssp HHHHHHTTCCEEEECSCCEEEEEEE--TTE-EEEEE--SSSCC--EEESSCCEECCCBCGGGSHHHHHHS
T ss_pred HHHHHhhCCcEEEecCcEEEEEEec--CCc-eEEEe--cCCeE--eccCCceEEeeccCCccchhhhhhc
Confidence 33333455 4999999999998654 232 24444 35543 3332578999998777656654444
No 212
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=27.59 E-value=53 Score=27.77 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=34.4
Q ss_pred hhHHhhhcCCCcEEEc--CcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhC
Q psy17300 6 IFLRAIKDKNTVQVSK--NSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQS 74 (152)
Q Consensus 6 ~~l~~~~~~~nl~l~~--~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~S 74 (152)
.|+. +.+++|+++++ ...+.+|.- .||.. .+|++ +.+ ..||+|+|.=-+...|...
T Consensus 335 ~y~~-~l~~~nV~lv~~~~~~I~~it~-------~gv~~--~dG~~--~~~-DvIV~ATGf~~~~~~~~~~ 392 (540)
T 3gwf_A 335 GYYE-VYNRPNVEAVAIKENPIREVTA-------KGVVT--EDGVL--HEL-DVLVFATGFDAVDGNYRRI 392 (540)
T ss_dssp STGG-GGGSTTEEEEETTTSCEEEECS-------SEEEE--TTCCE--EEC-SEEEECCCBSCSSHHHHTS
T ss_pred cHHH-HhcCCCEEEEeCCCCCccEEec-------CeEEc--CCCCE--EEC-CEEEECCccCccccCcCcc
Confidence 4554 45689999996 677888732 24554 36654 455 5888888864443344433
No 213
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=27.29 E-value=48 Score=26.28 Aligned_cols=52 Identities=13% Similarity=0.184 Sum_probs=35.4
Q ss_pred hhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhC
Q psy17300 10 AIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQS 74 (152)
Q Consensus 10 ~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~S 74 (152)
....+.++++++++.|++|.- . +|.+ .+|+ ++.+ ..||++.|...+ .+|..+
T Consensus 226 ~~l~~~gV~~~~~~~v~~i~~----~---~v~~--~~g~--~~~~-D~vi~a~G~~~~-~~l~~~ 277 (409)
T 3h8l_A 226 SIYNQLGIKLVHNFKIKEIRE----H---EIVD--EKGN--TIPA-DITILLPPYTGN-PALKNS 277 (409)
T ss_dssp HHHHHHTCEEECSCCEEEECS----S---EEEE--TTSC--EEEC-SEEEEECCEECC-HHHHTS
T ss_pred HHHHHCCCEEEcCCceEEECC----C---eEEE--CCCC--EEee-eEEEECCCCCcc-HHHHhc
Confidence 334467899999999999742 2 2444 3554 4667 589999987765 466666
No 214
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=27.08 E-value=84 Score=28.09 Aligned_cols=40 Identities=15% Similarity=0.311 Sum_probs=28.2
Q ss_pred CCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEcc
Q psy17300 15 NTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAA 62 (152)
Q Consensus 15 ~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaa 62 (152)
.+++|++++.|++|..+. +. |.+...+|. .+.| +.||+|+
T Consensus 542 ~gl~I~l~t~V~~I~~~~--~~---v~V~~~~G~--~i~A-d~VIvA~ 581 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSG--DE---VQVTTTDGT--GYSA-QKVLVTV 581 (776)
T ss_dssp TTSCEESSCCEEEEECSS--SS---EEEEETTCC--EEEE-SEEEECC
T ss_pred hCCcEEcCCeeEEEEEcC--CE---EEEEECCCc--EEEc-CEEEECC
Confidence 367999999999998763 33 333324554 4677 6899987
No 215
>3sqn_A Conserved domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MGA family; 2.31A {Enterococcus faecalis}
Probab=26.07 E-value=18 Score=30.45 Aligned_cols=17 Identities=18% Similarity=0.004 Sum_probs=15.5
Q ss_pred cEEEEccCCccChHHHh
Q psy17300 56 REVVLAANSINSVRILQ 72 (152)
Q Consensus 56 k~VIlaaGai~tP~lLl 72 (152)
+.+|+|+|+|+|.++|+
T Consensus 400 ~~~vVC~~GigtS~lL~ 416 (485)
T 3sqn_A 400 TAYFLFQGEPAWKAFLQ 416 (485)
T ss_dssp EEEEECCSCHHHHHHHH
T ss_pred eEEEECCCchhHHHHHH
Confidence 57899999999999997
No 216
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=23.99 E-value=45 Score=25.21 Aligned_cols=57 Identities=16% Similarity=0.249 Sum_probs=35.6
Q ss_pred hcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCC
Q psy17300 12 KDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGV 76 (152)
Q Consensus 12 ~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgi 76 (152)
....+..+++++ +..+.-+ ++++.+|++. +|+ ++.+ ..+|+++|..-.-.+|...|+
T Consensus 190 l~~~g~~~~~~~-v~~~~~~--~~~~~~v~~~--~g~--~i~~-~~~vi~~g~~~~~~~~~~~g~ 246 (304)
T 4fk1_A 190 LSNKNIPVITES-IRTLQGE--GGYLKKVEFH--SGL--RIER-AGGFIVPTFFRPNQFIEQLGC 246 (304)
T ss_dssp HHTTTCCEECSC-EEEEESG--GGCCCEEEET--TSC--EECC-CEEEECCEEECSSCHHHHTTC
T ss_pred hhccceeEeeee-EEEeecC--CCeeeeeecc--ccc--eeee-cceeeeeccccCChhhhhcCe
Confidence 345678888876 5555433 5667777764 454 3445 467777776655556666665
No 217
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=22.95 E-value=64 Score=26.23 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=40.0
Q ss_pred hHHhhhcCCCcEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHHhhCCCC
Q psy17300 7 FLRAIKDKNTVQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRILQQSGVG 77 (152)
Q Consensus 7 ~l~~~~~~~nl~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lLl~Sgig 77 (152)
.+.....+.++++++++.|+++. +.. |.+ .+|+ .+.+ ..|++|.|..-+..+|..+|+.
T Consensus 193 ~~~~~l~~~gV~i~~~~~v~~~~----~~~---v~~--~~g~--~~~~-D~vl~a~G~~Pn~~~~~~~gl~ 251 (437)
T 4eqs_A 193 PILDELDKREIPYRLNEEINAIN----GNE---ITF--KSGK--VEHY-DMIIEGVGTHPNSKFIESSNIK 251 (437)
T ss_dssp HHHHHHHHTTCCEEESCCEEEEE----TTE---EEE--TTSC--EEEC-SEEEECCCEEESCGGGTTSSCC
T ss_pred HHHHHhhccceEEEeccEEEEec----CCe---eee--cCCe--EEee-eeEEEEeceecCcHHHHhhhhh
Confidence 34444456789999999998863 222 333 3454 3566 6999999988776777777763
No 218
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=22.91 E-value=88 Score=24.59 Aligned_cols=47 Identities=21% Similarity=0.193 Sum_probs=31.8
Q ss_pred cEEEcCcEEEEEEEeCCCCeEEEEEEEcCCCcEEEEEeCcEEEEccCCccChHHH
Q psy17300 17 VQVSKNSEVTKLCFDETKTKVTGVEFRNPQGKTIKVNANREVVLAANSINSVRIL 71 (152)
Q Consensus 17 l~l~~~~~V~ri~~~~~~~~~~gV~~~~~~g~~~~~~a~k~VIlaaGai~tP~lL 71 (152)
.+|+.++.|++|..++ +.+ .|.+ .+|. .+++ +.||.|.|.-...|=+
T Consensus 141 ~~i~~~~~v~~i~~~~--~~v-~v~~--~~g~--~~~a-d~vV~AdG~~S~vR~~ 187 (398)
T 2xdo_A 141 DTVIWDRKLVMLEPGK--KKW-TLTF--ENKP--SETA-DLVILANGGMSKVRKF 187 (398)
T ss_dssp TSEEESCCEEEEEECS--SSE-EEEE--TTSC--CEEE-SEEEECSCTTCSCCTT
T ss_pred CEEEECCEEEEEEECC--CEE-EEEE--CCCc--EEec-CEEEECCCcchhHHhh
Confidence 5788999999998763 322 2444 3554 4677 6999999986654443
Done!