BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17305
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZC84|CNDP2_BOVIN Cytosolic non-specific dipeptidase OS=Bos taurus GN=CNDP2 PE=2 SV=1
Length = 475
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 116/156 (74%)
Query: 8 LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICD 67
L + +YV+ N++++++ L E VAI+SVS+ + R + M+ A +KQLG +V++ D
Sbjct: 4 LTTLFKYVDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADIKQLGGSVQLVD 63
Query: 68 IGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDE 127
IG Q LP+G I PP++LG LG+D K TV +YGHLDVQPA EDGW++EPF L +D
Sbjct: 64 IGTQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDG 123
Query: 128 KLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIK 163
KL+GRGA+DDKGPV GW++A+EAFQ+TK+ VPVN++
Sbjct: 124 KLFGRGATDDKGPVAGWINALEAFQKTKQEVPVNVR 159
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 52/57 (91%), Gaps = 2/57 (3%)
Query: 157 NVPVNI--KEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKV 211
++PV + +E TGKNV+LLP+G++DDGAHSQNEK++ RNYIEGTK+LAAYLYE+S++
Sbjct: 417 SIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRRNYIEGTKMLAAYLYEVSQL 473
>sp|Q96KP4|CNDP2_HUMAN Cytosolic non-specific dipeptidase OS=Homo sapiens GN=CNDP2 PE=1
SV=2
Length = 475
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 115/156 (73%)
Query: 8 LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICD 67
L + +Y++ N++++I+ L + VAI+SVS+ + R + M+ A +KQLG +VE+ D
Sbjct: 4 LTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLGGSVELVD 63
Query: 68 IGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDE 127
IG Q LP+G I PP++LG LG+D K TV +YGHLDVQPA EDGW++EPF L +D
Sbjct: 64 IGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDG 123
Query: 128 KLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIK 163
KLYGRG++DDKGPV GW++A+EA+Q+T + +PVN++
Sbjct: 124 KLYGRGSTDDKGPVAGWINALEAYQKTGQEIPVNVR 159
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 51/57 (89%), Gaps = 2/57 (3%)
Query: 157 NVPVNI--KEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKV 211
++PV + +E TGKNV+LLP+G++DDGAHSQNEK++ NYIEGTK+LAAYLYE+S++
Sbjct: 417 SIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRYNYIEGTKMLAAYLYEVSQL 473
>sp|Q5R432|CNDP2_PONAB Cytosolic non-specific dipeptidase OS=Pongo abelii GN=CNDP2 PE=2
SV=1
Length = 475
Score = 176 bits (447), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 115/156 (73%)
Query: 8 LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICD 67
L + +Y++ N++++I+ L + VAI+SVS+ + R + M+ A +KQLG +VE+ D
Sbjct: 4 LTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLGGSVELVD 63
Query: 68 IGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDE 127
IG Q LP+G I PP++LG LG+D K TV +YGHLDVQPA EDGW++EPF L +D
Sbjct: 64 IGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDG 123
Query: 128 KLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIK 163
KL+GRG++DDKGPV GW++A+EA+Q+T + +PVN++
Sbjct: 124 KLHGRGSTDDKGPVAGWINALEAYQKTDQEIPVNVR 159
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 51/57 (89%), Gaps = 2/57 (3%)
Query: 157 NVPVNI--KEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKV 211
++PV + +E TGKNV+LLP+G++DDGAHSQNEK++ NYIEGTK+LAAYLYE+S++
Sbjct: 417 SIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRHNYIEGTKMLAAYLYEVSQL 473
>sp|Q6Q0N1|CNDP2_RAT Cytosolic non-specific dipeptidase OS=Rattus norvegicus GN=Cndp2
PE=1 SV=1
Length = 475
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 114/156 (73%)
Query: 8 LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICD 67
L + +Y++ N+++F++ L E VAI+SVS+ + R + M A +++LG +VE+ D
Sbjct: 4 LKAVFQYIDENQDRFVKKLAEWVAIQSVSAWPEKRGEIRRMTEAAAADVQRLGGSVELVD 63
Query: 68 IGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDE 127
IG Q LP+G I PP++LG LG+D K TV +YGHLDVQPA EDGW++EPF L ++
Sbjct: 64 IGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREG 123
Query: 128 KLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIK 163
KLYGRG++DDKGPV GW++A+EA+Q+T + +PVN++
Sbjct: 124 KLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLR 159
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 51/57 (89%), Gaps = 2/57 (3%)
Query: 157 NVPVNI--KEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKV 211
++PV + +E TGKNV+LLP+G++DDGAHSQNEK++ NYIEGTK+LAAYLYE+S++
Sbjct: 417 SIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQL 473
>sp|Q9D1A2|CNDP2_MOUSE Cytosolic non-specific dipeptidase OS=Mus musculus GN=Cndp2 PE=1
SV=1
Length = 475
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 115/156 (73%)
Query: 8 LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICD 67
L + +Y++ N++++++ L E VAI+SVS+ + R + M+ A +++LG +VE+ D
Sbjct: 4 LKAVFQYIDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVD 63
Query: 68 IGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDE 127
IG Q LP+G I PP++LG LG+D K TV +YGHLDVQPA EDGW++EPF L ++
Sbjct: 64 IGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREG 123
Query: 128 KLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIK 163
KLYGRG++DDKGPV GW++A+EA+Q+T + +PVN++
Sbjct: 124 KLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLR 159
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 51/57 (89%), Gaps = 2/57 (3%)
Query: 157 NVPVNI--KEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKV 211
++PV + +E TGKNV+LLP+G++DDGAHSQNEK++ NYIEGTK+LAAYLYE+S++
Sbjct: 417 SIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQL 473
>sp|Q66HG3|CNDP1_RAT Beta-Ala-His dipeptidase OS=Rattus norvegicus GN=Cndp1 PE=2 SV=1
Length = 492
Score = 170 bits (430), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 117/162 (72%), Gaps = 6/162 (3%)
Query: 8 LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQT----INMIHYFADKLKQLGATV 63
L ++ +Y++ ++++F++ LKE VAIES SVQ P+ M+ ADKL+ LGA V
Sbjct: 10 LEKLFQYIDLHQDEFVQTLKEWVAIES--DSVQPMPRLRQELFRMMALAADKLRNLGARV 67
Query: 64 EICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLT 123
+ D+G+Q +P+G+S+ PP+IL LGND K +V YGHLDVQPA+KEDGW T+P+ LT
Sbjct: 68 DSVDLGSQQMPDGQSLPTPPIILAELGNDPKKPSVCFYGHLDVQPAQKEDGWLTDPYTLT 127
Query: 124 LKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165
D KLYGRGA+D+KGPVL W++A+ F+ ++++PVN+K +
Sbjct: 128 EVDGKLYGRGATDNKGPVLAWINAVSTFRALQQDLPVNVKFI 169
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 153 QTKKNVPVN--IKEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISK 210
Q +P+ +++T K+V++LP+GA DDG HSQNEKI+ NYI+G+KL AA+ E+SK
Sbjct: 421 QDGSTIPIAKIFQDITQKSVMMLPLGAVDDGEHSQNEKINRWNYIQGSKLFAAFFLELSK 480
Query: 211 V 211
+
Sbjct: 481 L 481
>sp|Q8BUG2|CNDP1_MOUSE Beta-Ala-His dipeptidase OS=Mus musculus GN=Cndp1 PE=2 SV=1
Length = 492
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 119/169 (70%), Gaps = 4/169 (2%)
Query: 1 MASSAE--YLAEISEYVESNKNKFIENLKEAVAIES--VSSSVQHRPQTINMIHYFADKL 56
M SSA L ++ Y++ ++++F++ LKE VAIES V + R + M+ ADKL
Sbjct: 1 MFSSAHSGLLEKLFHYIDLHQDEFVQTLKEWVAIESDSVQPVPRLRQKLFQMMALAADKL 60
Query: 57 KQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWN 116
+ LGA VE D+G+Q +P+G+S+ PP++L LG+D K TV YGHLDVQPA+K+DGW
Sbjct: 61 RNLGAGVESIDLGSQQMPDGQSLPIPPILLAELGSDPEKPTVCFYGHLDVQPAQKDDGWL 120
Query: 117 TEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165
T+P+ LT D KLYGRGA+D+KGPVL W++A+ F+ ++++PVNIK +
Sbjct: 121 TDPYTLTEVDGKLYGRGATDNKGPVLAWINAVSTFRALQQDLPVNIKFI 169
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 162 IKEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISK 210
+ +T K+V++LP+GA DDG HSQNEKI+ NYI+G+KL AA+ E+SK
Sbjct: 432 FQAITQKSVMMLPLGAVDDGEHSQNEKINRWNYIQGSKLFAAFFLELSK 480
>sp|Q96KN2|CNDP1_HUMAN Beta-Ala-His dipeptidase OS=Homo sapiens GN=CNDP1 PE=1 SV=4
Length = 507
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 115/160 (71%), Gaps = 2/160 (1%)
Query: 8 LAEISEYVESNKNKFIENLKEAVAIES--VSSSVQHRPQTINMIHYFADKLKQLGATVEI 65
L ++ +Y++ ++++F++ LKE VAIES V + R + M+ AD L++LGA V
Sbjct: 35 LEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVAS 94
Query: 66 CDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLK 125
D+G Q LP+G+S+ PP+IL LG+D K TV YGHLDVQPA++ DGW T+P+VLT
Sbjct: 95 VDMGPQQLPDGQSLPIPPIILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEV 154
Query: 126 DEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165
D KLYGRGA+D+KGPVL W++A+ AF+ ++++PVNIK +
Sbjct: 155 DGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFI 194
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 162 IKEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKV 211
+E+ K+V+L+P+GA DDG HSQNEKI+ NYIEGTKL AA+ E++++
Sbjct: 457 FQEIVHKSVVLIPLGAVDDGEHSQNEKINRWNYIEGTKLFAAFFLEMAQL 506
>sp|Q5AKA5|DUG1_CANAL Cys-Gly metallodipeptidase DUG1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DUG1 PE=1 SV=1
Length = 485
Score = 157 bits (397), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 113/170 (66%), Gaps = 8/170 (4%)
Query: 1 MASSAEY----LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKL 56
M++S Y L + + +E K KFIE L++A+AI SVSS RP+ + M ++ D+L
Sbjct: 1 MSTSTTYEKLPLQPLFDTIEELKPKFIERLQKAIAIPSVSSDESLRPKVVEMANFLVDEL 60
Query: 57 KQLGAT-VEICDIGNQTLP-NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG 114
K LG T +++ ++G Q P +++ PP++LG GND AK TVLVYGH DVQPA K+DG
Sbjct: 61 KTLGFTDIQLKELGTQPPPVQDANLQLPPIVLGRFGNDPAKKTVLVYGHYDVQPALKDDG 120
Query: 115 WNTEPFVLTLKDEK--LYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
W TEPF + EK LYGRG++DDKGPV+GWL+ IEA + +PVN+
Sbjct: 121 WKTEPFTMHYDKEKEILYGRGSTDDKGPVVGWLNVIEAHNKLGWELPVNL 170
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 146 HAIEAFQQTKKNVPVNI---KEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLA 202
+ + F + ++P+ + KE+ G +VLLLPMG DDGAHS NEK+DV NYI G K L
Sbjct: 418 NVVPDFTREGGSIPITLTFEKEL-GVDVLLLPMGRGDDGAHSINEKLDVSNYINGCKTLG 476
Query: 203 AYLYEISK 210
YL+ K
Sbjct: 477 GYLHYYGK 484
>sp|Q9P6I2|DUG1_SCHPO Cys-Gly metallodipeptidase dug1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dug1 PE=2 SV=2
Length = 476
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 107/156 (68%), Gaps = 2/156 (1%)
Query: 8 LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICD 67
L ++ E ++ K++F+ L AV+I SVS+ V RP+ + M + + +LGA +E D
Sbjct: 5 LDKLYEVIDKKKDEFVTRLSRAVSIPSVSADVTLRPKVVEMADFVVSEFTKLGAKMEKRD 64
Query: 68 IGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDE 127
IG + +G+ + PP++LG GND +K TVL+Y H DVQPA EDGW+T+PF LT+ ++
Sbjct: 65 IGYHQM-DGQDVPLPPIVLGQYGNDPSKKTVLIYNHFDVQPASLEDGWSTDPFTLTVDNK 123
Query: 128 -KLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+++GRGA+DDKGP++GW+ AIEA ++ + PVN+
Sbjct: 124 GRMFGRGATDDKGPLIGWISAIEAHKELGIDFPVNL 159
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 151 FQQTKKNVPVNI--KEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEI 208
F + ++PV + ++ KNVLLLPMG DDGAHS NEK+D+ N+++G KL Y++E+
Sbjct: 412 FVREGGSIPVTVTFEQSLKKNVLLLPMGRGDDGAHSINEKLDLDNFLKGIKLFCTYVHEL 471
Query: 209 SKVT 212
+ V+
Sbjct: 472 ASVS 475
>sp|P43616|DUG1_YEAST Cys-Gly metallodipeptidase DUG1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DUG1 PE=1 SV=1
Length = 481
Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 100/159 (62%), Gaps = 4/159 (2%)
Query: 8 LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGA-TVEIC 66
L + + ++S K +F L +A+ I +VSS R + + + +++L Q G +++
Sbjct: 5 LTSVFQKIDSLKPQFFSRLTKAIQIPAVSSDESLRSKVFDKAKFISEQLSQSGFHDIKMV 64
Query: 67 DIGNQTLP-NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLK 125
D+G Q P + ++ PPVIL G+D +K TVLVYGH DVQPA+ EDGW+TEPF L +
Sbjct: 65 DLGIQPPPISTPNLSLPPVILSRFGSDPSKKTVLVYGHYDVQPAQLEDGWDTEPFKLVID 124
Query: 126 DEK--LYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+ K + GRG +DD GP+L W++ ++AF+ + + PVN+
Sbjct: 125 EAKGIMKGRGVTDDTGPLLSWINVVDAFKASGQEFPVNL 163
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 151 FQQTKKNVPVNI--KEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIEGTKLLAAYL 205
F + ++P+ + ++ +VLLLPMG DDGAHS NEK+D+ N++ G K +AAYL
Sbjct: 416 FTREGGSIPITLTFQDALNTSVLLLPMGRGDDGAHSINEKLDISNFVGGMKTMAAYL 472
>sp|P38149|DUG2_YEAST Probable di- and tripeptidase DUG2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DUG2 PE=1 SV=1
Length = 878
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 18 NKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGE 77
N + + L+E ++ ++VS S + T+++ A L+QL + LP+G
Sbjct: 433 NNEEMLNTLRELISFQTVSQS-KDTTNTLSL-RRCAIYLQQLFLKFGATNSQLFPLPDGG 490
Query: 78 SIKYPPVILGNL-GNDKA-------KHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKL 129
+ PV+ GN K K +L YGH DV + WNT+PF LT ++ L
Sbjct: 491 N----PVVFAYFQGNGKVSQVKGAKKKRILWYGHYDVISSGNTFNWNTDPFTLTCENGYL 546
Query: 130 YGRGASDDKGPVLGWLHAIE-AFQQ 153
GRG SD+KGP++ +H++ FQQ
Sbjct: 547 KGRGVSDNKGPLVSAIHSVAYLFQQ 571
>sp|Q058B2|DAPE_BUCCC Succinyl-diaminopimelate desuccinylase OS=Buchnera aphidicola
subsp. Cinara cedri (strain Cc) GN=dapE PE=3 SV=1
Length = 376
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 34/55 (61%)
Query: 97 TVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAF 151
TV GH DV PA W T PFV T+KD KL+GRG++D KG + L A+E F
Sbjct: 60 TVTFLGHTDVVPAGSTRKWKTSPFVATIKDGKLFGRGSADMKGSIAAMLIAVENF 114
>sp|A1K719|DAPE_AZOSB Succinyl-diaminopimelate desuccinylase OS=Azoarcus sp. (strain
BH72) GN=dapE PE=3 SV=1
Length = 380
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 29 AVAIESVS-SSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILG 87
A+A E +S SSV P+ + A +L LG E DIG +
Sbjct: 10 ALACELISRSSVT--PEDAGCLQLIAQRLAPLGFVCERIDIGG---------------VS 52
Query: 88 NLGNDK--AKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWL 145
NL + A+ + GH DV P D W + PF T++D LYGRGA+D K + G++
Sbjct: 53 NLWARRGSARPLLCFAGHTDVVPTGPLDAWQSPPFEPTIRDGHLYGRGAADMKSSLAGFV 112
Query: 146 HAIEAF 151
AIE F
Sbjct: 113 TAIERF 118
>sp|A9BZY6|DAPE_DELAS Succinyl-diaminopimelate desuccinylase OS=Delftia acidovorans
(strain DSM 14801 / SPH-1) GN=dapE PE=3 SV=1
Length = 386
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 43 PQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVY- 101
P+ + AD L+ +G E D G P+ ++ + A VLV+
Sbjct: 19 PEDAGCLELLADALQPMGFACERIDSG----PDSFRVRN---LWARRSGTGADRPVLVFA 71
Query: 102 GHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAF 151
GH DV P + W++ PFV T +D KLYGRGASD K + ++ A+E F
Sbjct: 72 GHTDVVPTGPLEQWSSPPFVPTHRDGKLYGRGASDMKTSIAAFVVALEEF 121
>sp|Q32LT9|P2011_DANRE Probable carboxypeptidase PM20D1.1 OS=Danio rerio GN=pm20d1.1 PE=2
SV=1
Length = 515
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGES 78
+ K ++N K AV I +VS S Q I + F L+++ + + +L E
Sbjct: 63 REKLLDNFKVAVQIPTVSFS--ESDQNITALQEFDLLLRRV-----FPKVFSSSLVRHEV 115
Query: 79 IKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDK 138
+ + +G D ++ H+DV PA + GW+ PF D +YGRG D+K
Sbjct: 116 VGNYSHLFTVVGADAGLEPYMLLAHIDVVPANEAGGWDAPPFSAQEIDGFIYGRGTIDNK 175
Query: 139 GPVLGWLHAIE 149
V+G L A+E
Sbjct: 176 QSVMGILQALE 186
>sp|Q31U31|ARGE_SHIBS Acetylornithine deacetylase OS=Shigella boydii serotype 4 (strain
Sb227) GN=argE PE=3 SV=1
Length = 383
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L ++G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASIGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDIDVTKLKKPLYI 138
>sp|P23908|ARGE_ECOLI Acetylornithine deacetylase OS=Escherichia coli (strain K12)
GN=argE PE=1 SV=2
Length = 383
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L ++G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASIGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|B1IVC1|ARGE_ECOLC Acetylornithine deacetylase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=argE PE=3 SV=1
Length = 383
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L ++G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASIGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|B1XBC2|ARGE_ECODH Acetylornithine deacetylase OS=Escherichia coli (strain K12 /
DH10B) GN=argE PE=3 SV=1
Length = 383
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L ++G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASIGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|C5A0C3|ARGE_ECOBW Acetylornithine deacetylase OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=argE PE=3 SV=1
Length = 383
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L ++G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASIGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|B7LA57|ARGE_ECO55 Acetylornithine deacetylase OS=Escherichia coli (strain 55989 /
EAEC) GN=argE PE=3 SV=1
Length = 383
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L ++G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASIGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|A8A765|ARGE_ECOHS Acetylornithine deacetylase OS=Escherichia coli O9:H4 (strain HS)
GN=argE PE=3 SV=1
Length = 383
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L ++G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASIGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|A8GQ98|DAPE_RICAH Succinyl-diaminopimelate desuccinylase OS=Rickettsia akari (strain
Hartford) GN=dapE PE=3 SV=2
Length = 381
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 22 FIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKY 81
+I LK+ + +SV+ P+ I Y D LKQ G EI G+ E +
Sbjct: 2 YIHYLKDLIGFKSVT------PENDGAIEYIDDLLKQHGFKTEIKIFGDF---KSEQVTN 52
Query: 82 PPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGW-NTEPFVLTLKDEKLYGRGASDDKGP 140
I G + + + GH+DV P + W N+ PF + +D K+YGRGA D KG
Sbjct: 53 LYAIFG-----RNEPNICFVGHVDVVPVDNHALWHNSSPFKASKQDGKIYGRGAVDMKGA 107
Query: 141 VLGWLHA 147
+ +L A
Sbjct: 108 IACFLAA 114
>sp|B2TWF2|ARGE_SHIB3 Acetylornithine deacetylase OS=Shigella boydii serotype 18 (strain
CDC 3083-94 / BS512) GN=argE PE=3 SV=1
Length = 383
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L ++G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASIGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|Q8C165|P20D1_MOUSE Probable carboxypeptidase PM20D1 OS=Mus musculus GN=Pm20d1 PE=2
SV=1
Length = 503
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 12 SEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQ 71
S++ E + E LK A+ I +VS S H + F + +++ TV +
Sbjct: 41 SQFSEEERVAIKEALKGAIQIPTVSFS--HEESNTTALAEFGEYIRKAFPTV-----FHS 93
Query: 72 TLPNGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYG 131
+L E + + G+D + ++ H+DV PA E+GW PF ++ +YG
Sbjct: 94 SLVQHEVVAKYSHLFTIQGSDPSLQPYMLMAHIDVVPA-PEEGWEVPPFSGLERNGFIYG 152
Query: 132 RGASDDKGPVLGWLHAIE 149
RGA D+K V+ LHA+E
Sbjct: 153 RGALDNKNSVMAILHALE 170
>sp|A1W7M0|DAPE_ACISJ Succinyl-diaminopimelate desuccinylase OS=Acidovorax sp. (strain
JS42) GN=dapE PE=3 SV=1
Length = 391
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 43 PQTINMIHYFADKLKQLGATVEICDIG--NQTLPNGESIKYPPVILGNLGNDKAKHTVLV 100
P + A +L LG E D G N + N S K + G A TV+
Sbjct: 19 PDDAGCLDLLARRLAPLGFACERLDSGPENFRVSNLWS-KRSAALSGQ--AQAATKTVVF 75
Query: 101 YGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAF 151
GH DV P + W++ PF T +D +LYGRGASD K + ++ A+E F
Sbjct: 76 AGHTDVVPTGPVEQWSSPPFTPTHRDGRLYGRGASDMKASIAAFVVAVEEF 126
>sp|B6I5H3|ARGE_ECOSE Acetylornithine deacetylase OS=Escherichia coli (strain SE11)
GN=argE PE=3 SV=1
Length = 383
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASCGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|B7NFQ7|ARGE_ECOLU Acetylornithine deacetylase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=argE PE=3 SV=1
Length = 383
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASCGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|B7M711|ARGE_ECO8A Acetylornithine deacetylase OS=Escherichia coli O8 (strain IAI1)
GN=argE PE=3 SV=1
Length = 383
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASCGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|A1WEL1|DAPE_VEREI Succinyl-diaminopimelate desuccinylase OS=Verminephrobacter
eiseniae (strain EF01-2) GN=dapE PE=3 SV=1
Length = 401
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 43 PQTINMIHYFADKLKQLGATVEICDIG--NQTLPNGESIKYPPVILGNLGNDKAK---HT 97
P + A +L LG E D G Q + N + + PV +D +K T
Sbjct: 19 PDDAGCLDLLAARLAPLGFVCERMDSGPARQRVSNLWAKR--PVAQVPDAHDASKTAVKT 76
Query: 98 VLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAF 151
++ GH DV P + W++ PF+ T +D +LYGRGASD K + ++ A+E F
Sbjct: 77 IVFAGHTDVVPTGPLEQWSSNPFLPTRRDGRLYGRGASDMKTSIAAFIVALEEF 130
>sp|Q4FNF5|DAPE_PELUB Succinyl-diaminopimelate desuccinylase OS=Pelagibacter ubique
(strain HTCC1062) GN=dapE PE=3 SV=1
Length = 384
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 27 KEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVIL 86
KE + S++ P ++ + A KL +G +I + ++ N + +K L
Sbjct: 11 KELIRFPSIT------PIDAGVMKFLAKKLTTIGFKCKILEFKDK---NSKPVKNLYARL 61
Query: 87 GNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLH 146
GN + + GHLDV P W +PF T+K L GRGA+D K + W+
Sbjct: 62 GN-----TQPNFMFAGHLDVVPPGNIQDWTIKPFSPTIKKNHLIGRGANDMKSAIASWVV 116
Query: 147 AIEAFQQTKKNV 158
A+ + T K +
Sbjct: 117 AVNNYVLTNKKI 128
>sp|A7ZUH5|ARGE_ECO24 Acetylornithine deacetylase OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=argE PE=3 SV=1
Length = 383
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASCGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|Q4UJR2|DAPE_RICFE Succinyl-diaminopimelate desuccinylase OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=dapE PE=3 SV=1
Length = 381
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 22 FIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKY 81
+I LK+ + +SV+ P++ I Y D LKQ G EI G+ ++
Sbjct: 2 YINYLKDLIGFKSVT------PESDGAIEYIDDLLKQHGFKTEIKIFGDSKSEQATNLY- 54
Query: 82 PPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGW-NTEPFVLTLKDEKLYGRGASDDKGP 140
+ G+ + + GH+DV PA + W N PF + +D K+YGRGA D KG
Sbjct: 55 --AVFGS-----NEPNICFVGHVDVVPAGNHELWHNASPFKASHQDGKIYGRGAVDMKGA 107
Query: 141 VLGWLHA 147
+ +L A
Sbjct: 108 IACFLAA 114
>sp|B0BTF3|DAPE_ACTPJ Succinyl-diaminopimelate desuccinylase OS=Actinobacillus
pleuropneumoniae serotype 3 (strain JL03) GN=dapE PE=3
SV=1
Length = 377
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGES 78
KN I ++ + S+S + Q Q I A++L QLG T+E LP G++
Sbjct: 2 KNNIINLAQDLIRRPSISPADQGCQQVI------AERLAQLGFTLEW-------LPFGDT 48
Query: 79 IKYPPVILGNLGNDKAKH-----TVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRG 133
+ N AKH V GH DV P E W PF + D LYGRG
Sbjct: 49 L-----------NLWAKHGSGSPVVAFAGHTDVVPVGDETQWTYPPFEARIVDNMLYGRG 97
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKN 157
A+D KG + + A E F + N
Sbjct: 98 AADMKGSLSALVVAAEEFVKANPN 121
>sp|B9MJL1|DAPE_ACIET Succinyl-diaminopimelate desuccinylase OS=Acidovorax ebreus (strain
TPSY) GN=dapE PE=3 SV=1
Length = 391
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 94 AKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAF 151
A TV+ GH DV P + W++ PF T +D +LYGRGASD K + ++ A+E F
Sbjct: 69 ATKTVVFAGHTDVVPTGPVEQWSSPPFTPTHRDGRLYGRGASDMKASIAAFVVAVEEF 126
>sp|Q1H051|DAPE_METFK Succinyl-diaminopimelate desuccinylase OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dapE
PE=3 SV=1
Length = 375
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 98 VLVY-GHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKK 156
+LV+ GH DV P W+T PF T+KD LYGRGA+D K + ++ AIEAF
Sbjct: 60 LLVFAGHTDVVPTGPVAQWHTPPFTPTVKDGMLYGRGAADMKTSLAAFITAIEAFVADHP 119
Query: 157 NVPVNI 162
+ P +I
Sbjct: 120 DHPGSI 125
>sp|Q5NYT7|DAPE_AROAE Succinyl-diaminopimelate desuccinylase OS=Aromatoleum aromaticum
(strain EbN1) GN=dapE PE=3 SV=1
Length = 384
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 98 VLVY-GHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKK 156
VL + GH DV PA DGW++ PF T++ +L+GRGA+D K + ++ AIE F T
Sbjct: 65 VLCFAGHTDVVPAGPLDGWDSPPFEPTVRGGQLFGRGAADMKTSIAAFVTAIERFVATHP 124
Query: 157 N 157
+
Sbjct: 125 D 125
>sp|B7UNT3|ARGE_ECO27 Acetylornithine deacetylase OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=argE PE=3 SV=1
Length = 383
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASCGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLAKPLYI 138
>sp|Q8FB97|ARGE_ECOL6 Acetylornithine deacetylase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=argE PE=3 SV=2
Length = 383
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASCGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLAKPLYI 138
>sp|Q0TAA3|ARGE_ECOL5 Acetylornithine deacetylase OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=argE PE=3 SV=1
Length = 383
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASCGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLAKPLYI 138
>sp|B7MR48|ARGE_ECO81 Acetylornithine deacetylase OS=Escherichia coli O81 (strain ED1a)
GN=argE PE=3 SV=1
Length = 383
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASCGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLAKPLYI 138
>sp|B7MI93|ARGE_ECO45 Acetylornithine deacetylase OS=Escherichia coli O45:K1 (strain S88
/ ExPEC) GN=argE PE=3 SV=1
Length = 383
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASCGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLAKPLYI 138
>sp|Q32AB8|ARGE_SHIDS Acetylornithine deacetylase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=argE PE=3 SV=1
Length = 383
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKNLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASTGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|Q68VN9|DAPE_RICTY Succinyl-diaminopimelate desuccinylase OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=dapE PE=3 SV=1
Length = 383
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 26 LKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIG---NQTLPNGESIKYP 82
LK ++ ESV+ P + + Y LKQ G EI G N+ + N
Sbjct: 6 LKNLISFESVT------PNSAGAVEYIDGLLKQHGFKTEIKIFGDSKNERVTN------- 52
Query: 83 PVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGW-NTEPFVLTLKDEKLYGRGASDDKGPV 141
+ G G+++ + GH+DV PA + W N+ PF +D K+YGRGA D KG +
Sbjct: 53 --LYGVFGSNEP--NICFVGHVDVVPAGNHEFWHNSNPFKFHEQDGKIYGRGAVDMKGAI 108
Query: 142 LGWLHA 147
+L A
Sbjct: 109 ACFLAA 114
>sp|Q0SY37|ARGE_SHIF8 Acetylornithine deacetylase OS=Shigella flexneri serotype 5b
(strain 8401) GN=argE PE=3 SV=1
Length = 383
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASYGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|P59600|ARGE_SHIFL Acetylornithine deacetylase OS=Shigella flexneri GN=argE PE=3 SV=1
Length = 383
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASYGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|Q21HG2|DAPE_SACD2 Succinyl-diaminopimelate desuccinylase OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=dapE PE=3 SV=1
Length = 382
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 102 GHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVN 161
GH DV P W T+PF T+KD LYGRGA+D KG + + A E+F N
Sbjct: 72 GHTDVVPTGDLGKWATDPFTPTIKDGMLYGRGAADMKGSLAAMITACESFIAAHPN---- 127
Query: 162 IKEVTGKNVLLLPMGASDDGAHSQNEKIDVRNYIE 196
TG+ L+ SD+ + N + V ++E
Sbjct: 128 ---HTGRIAFLI---TSDEEGPAINGTVKVVEWLE 156
>sp|B5Z059|ARGE_ECO5E Acetylornithine deacetylase OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=argE PE=3 SV=1
Length = 383
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASTGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
>sp|Q8X742|ARGE_ECO57 Acetylornithine deacetylase OS=Escherichia coli O157:H7 GN=argE
PE=3 SV=1
Length = 383
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 19 KNK---FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLP 74
KNK FIE + +A S+S++ + Q+ ++I AD K LG VE+ Q +P
Sbjct: 2 KNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEV-----QPVP 56
Query: 75 NGESIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDG-WNTEPFVLTLKDEKLYGRG 133
G K+ +L + G +L+ GH D P + DG W +PF LT D KLYG G
Sbjct: 57 -GTRNKF--NMLASTGQGAGG--LLLAGHTDTVPFD--DGRWTRDPFTLTEHDGKLYGLG 109
Query: 134 ASDDKGPVLGWLHAIEAFQQTKKNVPVNI 162
+D KG L A+ TK P+ I
Sbjct: 110 TADMKGFFAFILDALRDVDVTKLKKPLYI 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.130 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,422,615
Number of Sequences: 539616
Number of extensions: 3706153
Number of successful extensions: 7636
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 7080
Number of HSP's gapped (non-prelim): 567
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)