Query psy17305
Match_columns 223
No_of_seqs 205 out of 2096
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 18:35:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17305.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17305hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfo_A Putative acetylornithin 100.0 6.3E-30 2.2E-34 227.0 17.8 199 5-213 11-254 (433)
2 3dlj_A Beta-Ala-His dipeptidas 100.0 1.2E-29 4.3E-34 228.6 18.4 202 7-214 12-264 (485)
3 1cg2_A Carboxypeptidase G2; me 100.0 4.1E-29 1.4E-33 219.4 14.6 192 4-214 3-235 (393)
4 2zog_A Cytosolic non-specific 100.0 2E-28 6.8E-33 220.0 17.9 201 8-214 8-257 (479)
5 2pok_A Peptidase, M20/M25/M40 100.0 8.8E-28 3E-32 216.2 19.4 187 8-212 31-267 (481)
6 3khx_A Putative dipeptidase sa 100.0 2.6E-28 8.7E-33 220.5 14.7 142 7-166 21-168 (492)
7 1vgy_A Succinyl-diaminopimelat 99.9 2.2E-27 7.5E-32 208.4 15.4 171 19-212 5-222 (393)
8 3pfe_A Succinyl-diaminopimelat 99.9 5.2E-27 1.8E-31 210.9 16.7 187 8-211 5-249 (472)
9 1q7l_A Aminoacylase-1; catalys 99.9 4.4E-27 1.5E-31 188.7 14.4 133 19-166 9-143 (198)
10 4h2k_A Succinyl-diaminopimelat 99.9 4.4E-27 1.5E-31 197.0 14.1 128 20-166 6-133 (269)
11 3ct9_A Acetylornithine deacety 99.9 7E-27 2.4E-31 202.9 15.4 168 15-212 6-212 (356)
12 3isz_A Succinyl-diaminopimelat 99.9 7.7E-27 2.6E-31 203.0 15.6 169 20-211 3-218 (377)
13 3t68_A Succinyl-diaminopimelat 99.9 1.6E-27 5.6E-32 199.5 10.1 129 19-166 5-133 (268)
14 3ife_A Peptidase T; metallopep 99.9 2.9E-26 1E-30 203.9 14.0 176 18-212 25-276 (434)
15 1lfw_A PEPV; hydrolase, dipept 99.9 2.2E-24 7.6E-29 193.3 18.4 138 11-166 5-149 (470)
16 2f7v_A Aectylcitrulline deacet 99.9 4.8E-25 1.6E-29 192.1 11.2 170 14-213 3-211 (369)
17 3rza_A Tripeptidase; phosphory 99.9 2.7E-24 9.3E-29 188.9 12.5 178 9-210 13-237 (396)
18 3gb0_A Peptidase T; NP_980509. 99.9 5E-24 1.7E-28 185.6 13.7 169 19-210 5-217 (373)
19 3tx8_A Succinyl-diaminopimelat 99.9 7.7E-24 2.6E-28 184.2 14.8 163 19-213 12-217 (369)
20 1xmb_A IAA-amino acid hydrolas 99.9 6.7E-24 2.3E-28 187.8 14.2 175 7-212 13-235 (418)
21 1fno_A Peptidase T; metallo pe 99.9 6.2E-24 2.1E-28 187.7 13.1 174 20-213 2-250 (417)
22 2rb7_A Peptidase, M20/M25/M40 99.9 5.3E-24 1.8E-28 185.3 12.1 165 19-211 5-214 (364)
23 3io1_A Aminobenzoyl-glutamate 99.9 1.1E-23 3.8E-28 188.0 13.6 192 9-212 3-268 (445)
24 3mru_A Aminoacyl-histidine dip 99.9 1.2E-23 4.2E-28 189.8 13.9 166 18-210 12-244 (490)
25 1ysj_A Protein YXEP; M20 famil 99.9 4.1E-23 1.4E-27 182.0 11.6 166 17-211 29-240 (404)
26 2qyv_A XAA-His dipeptidase; YP 99.9 1.5E-22 5.2E-27 182.4 13.9 167 18-211 9-241 (487)
27 3ram_A HMRA protein; two-domai 99.8 1.5E-20 5.1E-25 165.2 7.8 167 7-214 3-211 (394)
28 1z2l_A Allantoate amidohydrola 99.8 1.2E-19 4.3E-24 160.3 13.7 117 13-165 2-123 (423)
29 2v8h_A Beta-alanine synthase; 99.8 9.9E-19 3.4E-23 157.0 14.1 113 17-165 29-153 (474)
30 2gre_A Deblocking aminopeptida 99.8 7E-19 2.4E-23 152.3 10.5 124 19-166 5-216 (349)
31 3n5f_A L-carbamoylase, N-carba 99.8 6.7E-18 2.3E-22 148.7 16.4 111 19-165 4-119 (408)
32 1tkj_A Aminopeptidase, SGAP; d 99.7 9.3E-18 3.2E-22 141.4 12.5 120 19-166 6-127 (284)
33 1rtq_A Bacterial leucyl aminop 99.7 3.2E-17 1.1E-21 139.0 12.7 125 19-166 19-147 (299)
34 2fvg_A Endoglucanase; TM1049, 99.7 2.4E-18 8.1E-23 148.4 4.9 116 25-165 3-192 (340)
35 1vhe_A Aminopeptidase/glucanas 99.7 2.1E-17 7.1E-22 144.2 9.4 122 20-165 7-211 (373)
36 3tc8_A Leucine aminopeptidase; 99.7 2.1E-16 7.3E-21 134.6 14.3 132 19-166 24-155 (309)
37 3gux_A Putative Zn-dependent e 99.7 2.2E-16 7.6E-21 134.7 13.8 132 19-166 26-157 (314)
38 2wyr_A Cobalt-activated peptid 99.7 2.3E-17 7.8E-22 141.7 7.6 114 22-165 4-200 (332)
39 2afw_A Glutaminyl-peptide cycl 99.6 7.6E-15 2.6E-19 126.0 14.2 125 19-166 30-165 (329)
40 1y0y_A FRV operon protein FRVX 99.6 8.9E-16 3.1E-20 132.8 6.9 65 22-108 8-73 (353)
41 1vho_A Endoglucanase; structur 99.5 4.9E-14 1.7E-18 121.4 9.8 67 21-108 6-72 (346)
42 2wzn_A TET3, 354AA long hypoth 99.5 1.3E-14 4.6E-19 122.0 6.1 90 23-142 12-101 (354)
43 1ylo_A Hypothetical protein SF 99.5 6.1E-14 2.1E-18 120.8 9.2 64 24-108 7-70 (348)
44 3cpx_A Aminopeptidase, M42 fam 99.4 1.6E-14 5.4E-19 123.6 0.5 117 19-152 16-181 (321)
45 3pb6_X Glutaminyl-peptide cycl 99.4 5.7E-12 1.9E-16 108.0 15.9 124 19-166 38-169 (330)
46 4f9u_A CG32412; alpha/beta hyd 99.3 5.3E-11 1.8E-15 101.2 16.2 119 24-166 15-138 (312)
47 4fuu_A Leucine aminopeptidase; 99.3 1.8E-11 6.1E-16 104.0 13.0 132 19-166 24-155 (309)
48 4fai_A CG5976, isoform B; alph 99.3 7.9E-11 2.7E-15 101.0 16.1 131 11-166 28-162 (330)
49 3kl9_A PEPA, glutamyl aminopep 99.0 3.4E-10 1.2E-14 98.0 6.8 68 21-108 4-72 (355)
50 2vpu_A TET3, 354AA long hypoth 98.9 1.8E-09 6.2E-14 93.3 5.3 67 21-109 10-77 (354)
51 3isx_A Endoglucanase; TM1050, 98.7 1E-08 3.6E-13 88.1 5.6 65 21-107 12-76 (343)
52 2ek8_A Aminopeptidase; metallo 98.7 3E-08 1E-12 87.5 8.3 61 83-166 204-268 (421)
53 3iib_A Peptidase M28; YP_92679 98.7 3.7E-08 1.3E-12 87.6 7.4 63 83-166 236-299 (444)
54 3fed_A Glutamate carboxypeptid 98.2 2.7E-06 9.2E-11 79.5 7.1 61 83-166 313-377 (707)
55 3kas_A Transferrin receptor pr 98.1 5.2E-06 1.8E-10 76.8 7.1 61 83-166 267-332 (640)
56 3k9t_A Putative peptidase; str 94.9 0.054 1.9E-06 47.3 6.8 56 84-166 167-224 (435)
57 1y7e_A Probable M18-family ami 91.6 0.22 7.7E-06 44.0 5.3 17 46-62 36-52 (458)
58 2glf_A Probable M18-family ami 84.1 1.7 5.9E-05 38.2 6.0 60 45-107 33-96 (450)
59 2ijz_A Probable M18-family ami 82.9 0.35 1.2E-05 42.4 1.0 60 44-107 17-85 (428)
60 3fed_A Glutamate carboxypeptid 80.9 6.6 0.00023 36.6 8.9 54 9-68 16-70 (707)
61 4efd_A Aminopeptidase; structu 78.0 21 0.00072 31.8 10.7 122 21-165 205-339 (522)
62 4eme_A M18 aspartyl aminopepti 77.0 6.6 0.00023 35.6 7.3 81 16-106 3-90 (571)
63 2ek8_A Aminopeptidase; metallo 76.1 6 0.00021 34.1 6.7 45 20-68 16-60 (421)
64 2glj_A Probable M18-family ami 75.9 1.7 5.9E-05 38.4 3.2 60 47-107 39-105 (461)
65 3iib_A Peptidase M28; YP_92679 75.3 8 0.00027 33.7 7.4 45 20-68 21-68 (444)
66 3kzw_A Cytosol aminopeptidase; 73.3 13 0.00046 33.1 8.2 120 20-165 197-332 (515)
67 3kl9_A PEPA, glutamyl aminopep 72.3 2.1 7.2E-05 36.4 2.8 37 126-165 173-209 (355)
68 3ij3_A Cytosol aminopeptidase; 70.6 56 0.0019 28.8 11.5 119 21-166 168-300 (482)
69 3h8g_F Cytosol aminopeptidase; 69.3 24 0.00081 31.4 8.9 120 20-165 180-316 (497)
70 3pei_A Cytosol aminopeptidase; 64.9 22 0.00074 31.5 7.7 123 20-165 164-300 (486)
71 3jru_B Probable cytosol aminop 61.8 84 0.0029 27.8 10.9 120 20-165 176-311 (490)
72 3kas_A Transferrin receptor pr 60.1 22 0.00075 32.6 7.2 55 5-62 5-59 (640)
73 2hc9_A Leucine aminopeptidase 57.3 1E+02 0.0035 27.2 14.0 123 20-165 167-301 (491)
74 3kr4_A M17 leucyl aminopeptida 57.0 52 0.0018 29.4 8.7 121 20-165 205-343 (528)
75 1gyt_A Cytosol aminopeptidase; 56.9 1E+02 0.0035 27.4 10.7 120 20-165 181-319 (503)
76 1lam_A Leucine aminopeptidase; 56.4 55 0.0019 28.9 8.8 120 20-165 161-299 (484)
77 2vpu_A TET3, 354AA long hypoth 52.9 5.8 0.0002 33.6 1.9 36 125-165 175-210 (354)
78 3vat_A Dnpep, aspartyl aminope 46.7 58 0.002 28.9 7.4 61 45-106 52-118 (496)
79 3isx_A Endoglucanase; TM1050, 37.7 16 0.00056 30.7 2.3 26 126-152 171-196 (343)
80 2kdu_B MUNC13-1, protein UNC-1 24.4 72 0.0025 17.5 2.7 23 197-219 1-23 (36)
81 1im3_D Cytomegalovirus protein 20.3 38 0.0013 21.9 1.2 13 122-134 10-22 (95)
No 1
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.97 E-value=6.3e-30 Score=227.00 Aligned_cols=199 Identities=18% Similarity=0.241 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCC--CCC-----
Q psy17305 5 AEYLAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLP--NGE----- 77 (223)
Q Consensus 5 ~~~~~~~~~~i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~--~g~----- 77 (223)
..+++++.++++.+.+++++++++|+++||+|++ +.++++||.++|+++|++++........+. ++.
T Consensus 11 ~~~~~~i~~~i~~~~~~~~~~l~~l~~~ps~s~~------e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
T 3pfo_A 11 DAITQSLRAAVDRNFNDQVAFLQRMVQFRSVRGE------EAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDT 84 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCCBTTC------CHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCC------HHHHHHHHHHHHHHCCCceEEEecchhhhhcccccccccc
Confidence 3467889999999999999999999999999984 568999999999999999987653110000 000
Q ss_pred -CCCCCcEEEEEcCCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccC
Q psy17305 78 -SIKYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKK 156 (223)
Q Consensus 78 -~~~~~~nl~a~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~ 156 (223)
.....+||+++++++.++|+|+|.|||||||.++.+.|+.+||.+.+++|++||||++|||+|++++|.|+++|++.+.
T Consensus 85 ~~~~~~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~ 164 (433)
T 3pfo_A 85 IDPAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGY 164 (433)
T ss_dssp CCGGGCEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTE
T ss_pred ccCCCCcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCC
Confidence 0001279999996555578999999999999987788999999999999999999999999999999999999999887
Q ss_pred CCceeeEEecc------c--------------ceeeccCcc-----------------cCCCCcCCCCccceecccchhh
Q psy17305 157 NVPVNIKEVTG------K--------------NVLLLPMGA-----------------SDDGAHSQNEKIDVRNYIEGTK 199 (223)
Q Consensus 157 ~~~~~i~~~~g------~--------------~~~~~~~g~-----------------~~~~ahag~~~~~g~~ai~g~~ 199 (223)
.++++|.+++. . .++++++.. .+.++|++ .|..|+||+.
T Consensus 165 ~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha~-~p~~g~nAi~--- 240 (433)
T 3pfo_A 165 APDARVHVQTVTEEESTGNGALSTLMRGYRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHVA-YSETGTSAIL--- 240 (433)
T ss_dssp EESSCEEEEEESCTTTTCHHHHHHHHTTCCCSEEEECCCCSSCEEEEECEEEEEEEEEECCCCBGG-GGGGSCCHHH---
T ss_pred CCCccEEEEEEecCccCChhHHHHHhcCCCCCEEEEeCCCCCceEEecceEEEEEEEEEcCCCccC-CCCcCcCHHH---
Confidence 77778775531 1 134444332 13489998 7899999999
Q ss_pred HHHHHHHHHHhhhh
Q psy17305 200 LLAAYLYEISKVTQ 213 (223)
Q Consensus 200 ~~a~~~~~l~~l~~ 213 (223)
.+++.+..|..+.+
T Consensus 241 ~~~~~i~~l~~l~~ 254 (433)
T 3pfo_A 241 SAMHLIRAFEEYTK 254 (433)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888765
No 2
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=228.60 Aligned_cols=202 Identities=41% Similarity=0.670 Sum_probs=157.8
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHhhccCCC--CCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcE
Q psy17305 7 YLAEISEYVESNKNKFIENLKEAVAIESV--SSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPV 84 (223)
Q Consensus 7 ~~~~~~~~i~~~~~~~i~~l~~lv~i~s~--s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~n 84 (223)
.++++.++++++.++++++|++|++|||+ |+++....++.++++||.++|+++|++++.+..+...+..|+..+.++|
T Consensus 12 ~~~~i~~~i~~~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~~ 91 (485)
T 3dlj_A 12 LLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIPPV 91 (485)
T ss_dssp THHHHHHHHHHTHHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECCCE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCCcE
Confidence 46788999999999999999999999999 7653222247899999999999999999887653211111211111258
Q ss_pred EEEEcCCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEE
Q psy17305 85 ILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKE 164 (223)
Q Consensus 85 l~a~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~ 164 (223)
|++++++++++|+|+|+|||||||.++.+.|+.+||.+.+++|++||||++|||+|++++|.|+++|++.+..++++|.+
T Consensus 92 v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~ 171 (485)
T 3dlj_A 92 ILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKF 171 (485)
T ss_dssp EEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEE
T ss_pred EEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCccEEE
Confidence 99999765557899999999999998667899999999999999999999999999999999999999998888888876
Q ss_pred ecc------c-------------------ceeeccCccc----------------------CCCC--cCCCCccceeccc
Q psy17305 165 VTG------K-------------------NVLLLPMGAS----------------------DDGA--HSQNEKIDVRNYI 195 (223)
Q Consensus 165 ~~g------~-------------------~~~~~~~g~~----------------------~~~a--hag~~~~~g~~ai 195 (223)
++. + .+++++++.. ..++ |++. .|.||+
T Consensus 172 ~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~---~g~~a~ 248 (485)
T 3dlj_A 172 IIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGT---FGGILH 248 (485)
T ss_dssp EEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEEEEEECEEEEEEEEEESCSSCEETTT---STTSSC
T ss_pred EEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeEEEeccceEEEEEEEEECCCCCcCCC---CCcccc
Confidence 542 1 1334443321 1277 9986 588999
Q ss_pred chhhHHHHHHHHHHhhhhh
Q psy17305 196 EGTKLLAAYLYEISKVTQA 214 (223)
Q Consensus 196 ~g~~~~a~~~~~l~~l~~~ 214 (223)
. .++..+..|..|.+.
T Consensus 249 ~---~~~~l~~~l~~l~~~ 264 (485)
T 3dlj_A 249 E---PMADLVALLGSLVDS 264 (485)
T ss_dssp C---HHHHHHHHHTTSBCT
T ss_pred C---HHHHHHHHHHhhCCC
Confidence 9 888888888888764
No 3
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.96 E-value=4.1e-29 Score=219.39 Aligned_cols=192 Identities=17% Similarity=0.204 Sum_probs=155.2
Q ss_pred hHHHHHHHHHHHHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCc
Q psy17305 4 SAEYLAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPP 83 (223)
Q Consensus 4 ~~~~~~~~~~~i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~ 83 (223)
|+++.+++.++++++.++++++|++|++|||+|+.+. ++.++++||.++|+++|++++.+...... . .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~lv~i~s~s~~~~---~~~~~~~~l~~~l~~~G~~~~~~~~~~~~---~-----~~ 71 (393)
T 1cg2_A 3 AQKRDNVLFQAATDEQPAVIKTLEKLVNIETGTGDAE---GIAAAGNFLEAELKNLGFTVTRSKSAGLV---V-----GD 71 (393)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHHHTSCCBTTCHH---HHHHHHHHHHHHHHHTTCEEEEEECSTTC---C-----SE
T ss_pred ccchhhHHHHHHHhhHHHHHHHHHHHhcCCCCCCCHH---HHHHHHHHHHHHHHHcCCeEEEEecCcCC---C-----CC
Confidence 3455677889999999999999999999999997532 56889999999999999999887753100 0 15
Q ss_pred EEEEEcCCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeE
Q psy17305 84 VILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIK 163 (223)
Q Consensus 84 nl~a~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~ 163 (223)
|+++++++.. .|+|+|.|||||||+. +.|..+||. +++|++||||+.|||+|++++|+|++.|++.+.+++++|.
T Consensus 72 ~v~a~~~g~~-~~~i~l~aH~D~vp~~--~~~~~~Pf~--~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~ 146 (393)
T 1cg2_A 72 NIVGKIKGRG-GKNLLLMSHMDTVYLK--GILAKAPFR--VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTIT 146 (393)
T ss_dssp EEEEEEECSS-CCCEEEEEECCBSCCT--THHHHSCCE--EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE
T ss_pred eEEEEECCCC-CceEEEEEecCcCCCC--CccccCCee--eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEE
Confidence 9999986432 4899999999999975 357778996 7899999999999999999999999999998877777887
Q ss_pred Eeccc---------------------ceeeccCcc--c------------------CCCCcCCCCccceecccchhhHHH
Q psy17305 164 EVTGK---------------------NVLLLPMGA--S------------------DDGAHSQNEKIDVRNYIEGTKLLA 202 (223)
Q Consensus 164 ~~~g~---------------------~~~~~~~g~--~------------------~~~ahag~~~~~g~~ai~g~~~~a 202 (223)
+++.. .++.++++. . +.++|++..|..|+||+. .++
T Consensus 147 ~~~~~~EE~g~~G~~~~~~~~~~~~d~~i~~e~~~~~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~---~~~ 223 (393)
T 1cg2_A 147 VLFNTDEEKGSFGSRDLIQEEAKLADYVLSFEPTSAGDEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALV---EAS 223 (393)
T ss_dssp EEEESCGGGTTTTTHHHHHHHHHHCSEEEECCCEETTSCEEESEECEEEEEEEEEECBCEETTSCGGGSBCHHH---HHH
T ss_pred EEEEcccccCCccHHHHHHHHhhcCCEEEEeCCCCCCCCcEEEeeeeeEEEEEEEEeeecccCCCcccCcCHHH---HHH
Confidence 65421 255566653 1 238999999999999999 999
Q ss_pred HHHHHHHhhhhh
Q psy17305 203 AYLYEISKVTQA 214 (223)
Q Consensus 203 ~~~~~l~~l~~~ 214 (223)
+.+..|..+.++
T Consensus 224 ~~i~~l~~~~~~ 235 (393)
T 1cg2_A 224 DLVLRTMNIDDK 235 (393)
T ss_dssp HHHHHHGGGCBT
T ss_pred HHHHHHHhhhCc
Confidence 999999887654
No 4
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.96 E-value=2e-28 Score=220.05 Aligned_cols=201 Identities=40% Similarity=0.703 Sum_probs=155.7
Q ss_pred HHHHHHHHHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEE
Q psy17305 8 LAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILG 87 (223)
Q Consensus 8 ~~~~~~~i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a 87 (223)
++++.++++.+.++++++|++|++|||+|+++.+++++.++++||.++|+++|++++.+..+...+..|+..+.++||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a 87 (479)
T 2zog_A 8 LKAVFQYIDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLG 87 (479)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEE
Confidence 46788999999999999999999999999865444467899999999999999999887653100001110000159999
Q ss_pred EcCCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec-
Q psy17305 88 NLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT- 166 (223)
Q Consensus 88 ~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~- 166 (223)
+++++++.|+|+|.|||||||.+..+.|+.+||.+.++||++||||+.|||+|++++|+|++.|++.+.+++++|.+++
T Consensus 88 ~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~ 167 (479)
T 2zog_A 88 KLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLE 167 (479)
T ss_dssp EECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEE
T ss_pred EecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEEe
Confidence 9976545789999999999999765689999999999999999999999999999999999999999888888887553
Q ss_pred -----cc-------------------ceeeccCccc----------------------CCC--CcCCCCccceecccchh
Q psy17305 167 -----GK-------------------NVLLLPMGAS----------------------DDG--AHSQNEKIDVRNYIEGT 198 (223)
Q Consensus 167 -----g~-------------------~~~~~~~g~~----------------------~~~--ahag~~~~~g~~ai~g~ 198 (223)
|. .+++++++.. ..+ +|++. .|.||+.
T Consensus 168 ~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~~~~G~~~~~i~v~G~~~~~Hs~~---~g~~ai~-- 242 (479)
T 2zog_A 168 GMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGV---YGGSVHE-- 242 (479)
T ss_dssp SCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEEEECEEEEEEEEEECCSSCEEHHH---HTTTSCC--
T ss_pred cccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEEecceEEEEEEEEEeCCCCCccCC---CCCCccC--
Confidence 21 1234443221 114 78876 3889999
Q ss_pred hHHHHHHHHHHhhhhh
Q psy17305 199 KLLAAYLYEISKVTQA 214 (223)
Q Consensus 199 ~~~a~~~~~l~~l~~~ 214 (223)
.+++.+..|..+.+.
T Consensus 243 -~~~~~i~~l~~l~~~ 257 (479)
T 2zog_A 243 -AMTDLISLMGCLVDK 257 (479)
T ss_dssp -HHHHHHHHHTTSBCT
T ss_pred -HHHHHHHHHHhcCCC
Confidence 999999998877654
No 5
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.96 E-value=8.8e-28 Score=216.19 Aligned_cols=187 Identities=23% Similarity=0.410 Sum_probs=152.2
Q ss_pred HHHHHHHHHhcHH-HHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEE
Q psy17305 8 LAEISEYVESNKN-KFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVIL 86 (223)
Q Consensus 8 ~~~~~~~i~~~~~-~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~ 86 (223)
++++.++++++.+ ++++++++|++|||+|+... ++.++++||.++|+++|++++.++.. + ..||+
T Consensus 31 m~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~---~~~~~~~~l~~~l~~~G~~~~~~~~~------~-----~~~v~ 96 (481)
T 2pok_A 31 QEQIEKFEKDHVAQHYFEVLRTLISKKSVFAQQV---GLKEVANYLGEIFKRVGAEVEIDESY------T-----APFVM 96 (481)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHSCCCGGGCT---THHHHHHHHHHHHHHTTCEEEEECSS------S-----SCEEE
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHcCCCcCCCCH---HHHHHHHHHHHHHHHcCCEEEEecCC------C-----CcEEE
Confidence 4678899999999 99999999999999998543 56899999999999999998877632 1 16999
Q ss_pred EEcCCC-CCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 87 GNLGND-KAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 87 a~~~~~-~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
+++++. ++.|+|+|.|||||||.+..+.|+.+||.+.++||++||||++|||+|++++|+|++.|++.+..++++|.++
T Consensus 97 a~~~g~~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~ 176 (481)
T 2pok_A 97 AHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFI 176 (481)
T ss_dssp EEECCSSTTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEE
T ss_pred EEecCCCCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 998532 4568999999999999986668999999999999999999999999999999999999999855677788755
Q ss_pred c------cc------------------ceeeccCccc----------------------CCC--CcCCCCccceecccch
Q psy17305 166 T------GK------------------NVLLLPMGAS----------------------DDG--AHSQNEKIDVRNYIEG 197 (223)
Q Consensus 166 ~------g~------------------~~~~~~~g~~----------------------~~~--ahag~~~~~g~~ai~g 197 (223)
+ |+ .++.++++.. +.+ +|+ ..|..|.||+.
T Consensus 177 ~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~i~~~~~G~~~~~i~v~G~~g~~Hs-s~p~~g~nAi~- 254 (481)
T 2pok_A 177 MEGAEESASTDLDKYLEKHADKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVKSADVDIHS-SYGGVVESAPW- 254 (481)
T ss_dssp EESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCCBBCTTSCEEEECCBCEEEEEEEEEECSSSCEEG-GGTTTBCCHHH-
T ss_pred EecccccCchhHHHHHHHhHhhccCCCEEEECCCCccCCCCeeEEEecceeEEEEEEEecCCCCccc-cCCCCCCCHHH-
Confidence 3 21 0222222210 115 799 88889999999
Q ss_pred hhHHHHHHHHHHhhh
Q psy17305 198 TKLLAAYLYEISKVT 212 (223)
Q Consensus 198 ~~~~a~~~~~l~~l~ 212 (223)
.+++.+..|..+.
T Consensus 255 --~~a~~i~~l~~~~ 267 (481)
T 2pok_A 255 --YLLQALQSLRAAD 267 (481)
T ss_dssp --HHHHHHHHTBCTT
T ss_pred --HHHHHHHHhhCCC
Confidence 9999999887653
No 6
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.95 E-value=2.6e-28 Score=220.53 Aligned_cols=142 Identities=25% Similarity=0.389 Sum_probs=119.4
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHhhccCCCCCCCC------CchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCC
Q psy17305 7 YLAEISEYVESNKNKFIENLKEAVAIESVSSSVQ------HRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIK 80 (223)
Q Consensus 7 ~~~~~~~~i~~~~~~~i~~l~~lv~i~s~s~~~~------~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~ 80 (223)
|.+++.++++.+.+++++++++|++|||+|++.. +..++.++++|+.++|+++|++++... +
T Consensus 21 m~~~i~~~i~~~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~-~----------- 88 (492)
T 3khx_A 21 MASMWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD-H----------- 88 (492)
T ss_dssp --CTTHHHHHTTHHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET-T-----------
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC-C-----------
Confidence 3457888999999999999999999999998652 234678999999999999999987652 1
Q ss_pred CCcEEEEEcCCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCce
Q psy17305 81 YPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPV 160 (223)
Q Consensus 81 ~~~nl~a~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~ 160 (223)
...++.++. +.|+|+|+|||||||+++ .|+.+||.+.+++|+|||||++|||++++++|+|+++|++.+.++++
T Consensus 89 --~~~~~~~g~--~~~~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~ 162 (492)
T 3khx_A 89 --IAGRIEAGK--GNDVLGILCHVDVVPAGD--GWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKK 162 (492)
T ss_dssp --TEEEEEEEC--SSCEEEEEEECCCCCCCS--CCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred --EEEEEEeCC--CCCEEEEEEeccCCCCCC--CcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCC
Confidence 233444443 368999999999999973 79999999999999999999999999999999999999999888888
Q ss_pred eeEEec
Q psy17305 161 NIKEVT 166 (223)
Q Consensus 161 ~i~~~~ 166 (223)
+|.+++
T Consensus 163 ~i~~~~ 168 (492)
T 3khx_A 163 RIHMII 168 (492)
T ss_dssp EEEEEE
T ss_pred CEEEEE
Confidence 887553
No 7
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.95 E-value=2.2e-27 Score=208.41 Aligned_cols=171 Identities=25% Similarity=0.326 Sum_probs=139.3
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTV 98 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~i 98 (223)
.+++++++++|+++||+|+. +.++++||.++|+++|++++....+. ..|++++++. ++|+|
T Consensus 5 ~~~~~~~l~~lv~~ps~s~~------e~~~~~~l~~~l~~~G~~~~~~~~~~-----------~~nv~a~~g~--~~~~i 65 (393)
T 1vgy_A 5 ETQSLELAKELISRPSVTPD------DRDCQKLMAERLHKIGFAAEEMHFGN-----------TKNIWLRRGT--KAPVV 65 (393)
T ss_dssp CSHHHHHHHHHHTSCCBTTC------CTTHHHHHHHHHHTTTCEEEECCBTT-----------BCEEEEEECS--SSSEE
T ss_pred hHHHHHHHHHHhcCCCCCCC------cHHHHHHHHHHHHHcCCcEEEEecCC-----------CcEEEEEECC--CCCEE
Confidence 36789999999999999984 34688999999999999988765432 1599999843 36899
Q ss_pred EEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEecc----------c
Q psy17305 99 LVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVTG----------K 168 (223)
Q Consensus 99 ll~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~g----------~ 168 (223)
+|.|||||||.++.+.|..+||.+.++||++||||++|||+|++++|+|++.|++.+..++++|.+++. .
T Consensus 66 ~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga 145 (393)
T 1vgy_A 66 CFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGT 145 (393)
T ss_dssp EEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSH
T ss_pred EEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCH
Confidence 999999999998667899999999999999999999999999999999999999988777888875431 1
Q ss_pred ---------------ceeeccCccc----------------------CCCCcCCCCccceecccchhhHHHHHHHHHHhh
Q psy17305 169 ---------------NVLLLPMGAS----------------------DDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKV 211 (223)
Q Consensus 169 ---------------~~~~~~~g~~----------------------~~~ahag~~~~~g~~ai~g~~~~a~~~~~l~~l 211 (223)
.+++.+++.. +.++|++ .|..|+||+. .+++.+..|..+
T Consensus 146 ~~~~~~~~~~~~~~d~~i~~e~~~~~~~g~~i~~g~~G~~~~~i~v~G~~~Ha~-~P~~g~nAi~---~~a~~i~~l~~~ 221 (393)
T 1vgy_A 146 TKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIA-YPHLAINPVH---TFAPALLELTQE 221 (393)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCBSSSTTSEEECEECEEEEEEEEEECBCEETT-CGGGCBCHHH---HHHHHHHHHHHC
T ss_pred HHHHHHHHhcCcCCCEEEEeCCCCcccCCceeEEeeeeEEEEEEEEEccCcccC-CCccCCCHHH---HHHHHHHHhhcc
Confidence 1223333211 2388998 5899999999 999999998775
Q ss_pred h
Q psy17305 212 T 212 (223)
Q Consensus 212 ~ 212 (223)
.
T Consensus 222 ~ 222 (393)
T 1vgy_A 222 V 222 (393)
T ss_dssp C
T ss_pred c
Confidence 3
No 8
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.95 E-value=5.2e-27 Score=210.86 Aligned_cols=187 Identities=26% Similarity=0.400 Sum_probs=146.8
Q ss_pred HHHHHHHHHhcH-HHHHHHHHHhhccCCCCCC--CCC--chHHHHHHHHHHHHHHhcCCc---EEEEecCCCCCCCCCCC
Q psy17305 8 LAEISEYVESNK-NKFIENLKEAVAIESVSSS--VQH--RPQTINMIHYFADKLKQLGAT---VEICDIGNQTLPNGESI 79 (223)
Q Consensus 8 ~~~~~~~i~~~~-~~~i~~l~~lv~i~s~s~~--~~~--~~~~~~~~~~l~~~l~~~G~~---~~~~~~~~~~~~~g~~~ 79 (223)
.+++.++++++. ++++++|++|++|||+|+. +.. .+++.++++++.++|+++|++ ++..+... +
T Consensus 5 ~~~~~~~~~~~~~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~-----~--- 76 (472)
T 3pfe_A 5 PQGLYDYICQQWQEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKN-----R--- 76 (472)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTT-----S---
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCC-----C---
Confidence 467889999988 8899999999999999963 110 124789999999999999985 55554331 1
Q ss_pred CCCcEEEEEcCCCCCccEEEEEeccccCCCCCCCCCC--CCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCC
Q psy17305 80 KYPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWN--TEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKN 157 (223)
Q Consensus 80 ~~~~nl~a~~~~~~~~~~ill~~H~DtVp~~~~~~w~--~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~ 157 (223)
.+||++++++ +++|+|+|+|||||||++ +.|+ .+||.+.+++|++||||++|||++++++|.|+++|++.+..
T Consensus 77 --~~~v~a~~~g-~~~~~i~l~~H~D~vp~~--~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~ 151 (472)
T 3pfe_A 77 --TPLLFMEIPG-QIDDTVLLYGHLDKQPEM--SGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLP 151 (472)
T ss_dssp --CCEEEEEECC-SEEEEEEEEEECCBCCCC--SCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred --CcEEEEEEcC-CCCCeEEEEccccCCCCc--CCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCC
Confidence 2699999855 356899999999999996 6799 89999999999999999999999999999999999999877
Q ss_pred CceeeEEec------cc------------------ceeeccCccc------------------------CCCCcCCCCcc
Q psy17305 158 VPVNIKEVT------GK------------------NVLLLPMGAS------------------------DDGAHSQNEKI 189 (223)
Q Consensus 158 ~~~~i~~~~------g~------------------~~~~~~~g~~------------------------~~~ahag~~~~ 189 (223)
++ +|.+++ |+ .+++++.+.. +.++|++..+.
T Consensus 152 ~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i~~g~~G~~~~~~~v~~~G~~~H~~~~~~ 230 (472)
T 3pfe_A 152 YP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVELINEGVHSGSASG 230 (472)
T ss_dssp CE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCSCSSSCEEEEEECEEEEEEEEEESCSSCBCHHHHTT
T ss_pred CC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCCCcCCCCCeeEEEeeeEEEEEEEEEEeCCCCcccCCCCC
Confidence 76 777553 21 1334443211 23889886443
Q ss_pred ceecccchhhHHHHHHHHHHhh
Q psy17305 190 DVRNYIEGTKLLAAYLYEISKV 211 (223)
Q Consensus 190 ~g~~ai~g~~~~a~~~~~l~~l 211 (223)
.+.||+. .+++.+..|..+
T Consensus 231 ~~~nai~---~~~~~i~~l~~~ 249 (472)
T 3pfe_A 231 IVADSFR---VARQLISRIEDE 249 (472)
T ss_dssp TSCCHHH---HHHHHHHHHBCT
T ss_pred CCCCHHH---HHHHHHHHhhCc
Confidence 3469999 999999999877
No 9
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.95 E-value=4.4e-27 Score=188.66 Aligned_cols=133 Identities=20% Similarity=0.362 Sum_probs=113.2
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCC-CCCccE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGN-DKAKHT 97 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~-~~~~~~ 97 (223)
.++++++|++|++|||+|+.+ ++.++++|++++|+++|++++.++... | ..|+++++.+ ++..|+
T Consensus 9 ~~~~~~~l~~lv~i~s~s~~~----~e~~~~~~l~~~l~~~g~~~~~~~~~~-----g-----~~~~i~~~~g~~~~~~~ 74 (198)
T 1q7l_A 9 EHPSVTLFRQYLRIRTVQPKP----DYGAAVAFFEETARQLGLGCQKVEVAP-----G-----YVVTVLTWPGTNPTLSS 74 (198)
T ss_dssp CCHHHHHHHHHHTSCCBTTSC----CHHHHHHHHHHHHHHHTCEEEEEEEET-----T-----EEEEEEEECCSSTTSCE
T ss_pred HHHHHHHHHHHhcCCCCCCCc----CHHHHHHHHHHHHHHCCCeEEEEEcCC-----C-----CeEEEEEEccCCCCCCe
Confidence 367899999999999999743 477899999999999999988876421 1 1599998843 334589
Q ss_pred EEEEeccccCCCCCCCCCCCCCCceee-eCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 98 VLVYGHLDVQPAEKEDGWNTEPFVLTL-KDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 98 ill~~H~DtVp~~~~~~w~~~P~~~~~-~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
|+|+|||||||++. +.|..+||.+.+ ++|++||||+.|||+|++++|+|+++|++.+.+++++|.+++
T Consensus 75 ill~aH~DtVp~~~-~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~ 143 (198)
T 1q7l_A 75 ILLNSHTDVVPVFK-EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTF 143 (198)
T ss_dssp EEEEEECCBCCCCG-GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEE
T ss_pred EEEEeeecccCCCc-ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 99999999999973 579999999887 799999999999999999999999999999888888888665
No 10
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.95 E-value=4.4e-27 Score=196.98 Aligned_cols=128 Identities=25% Similarity=0.425 Sum_probs=112.4
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEE
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVL 99 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~il 99 (223)
+++++++++|++|||+|++. ..+++||.++|+++|++++.+..+. .+|++++++. ++|+|+
T Consensus 6 ~~~~~~l~~lv~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~~~~~-----------~~nv~a~~g~--~~~~i~ 66 (269)
T 4h2k_A 6 EKVVSLAQDLIRRPSISPND------EGCQQIIAERLEKLGFQIEWMPFND-----------TLNLWAKHGT--SEPVIA 66 (269)
T ss_dssp HHHHHHHHHHHTSCCBTTCC------TTHHHHHHHHHHTTTCEEEECCBTT-----------BCEEEEEECS--SSCEEE
T ss_pred HHHHHHHHHHhCCCCCCCCc------HHHHHHHHHHHHHcCCeEEEEEcCC-----------ceEEEEEeCC--CCCEEE
Confidence 57899999999999999853 3688999999999999998776542 1699999853 368999
Q ss_pred EEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 100 VYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 100 l~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
|.|||||||.++.+.|+.+||.+.+++|++||||+.|||+|++++++|+++|++.+..++++|.+++
T Consensus 67 l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~ 133 (269)
T 4h2k_A 67 FAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLI 133 (269)
T ss_dssp EEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEE
T ss_pred EEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEE
Confidence 9999999999877789999999999999999999999999999999999999998877788887654
No 11
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.94 E-value=7e-27 Score=202.93 Aligned_cols=168 Identities=19% Similarity=0.273 Sum_probs=131.5
Q ss_pred HHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCC-CC
Q psy17305 15 VESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGN-DK 93 (223)
Q Consensus 15 i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~-~~ 93 (223)
+++..+++++++++|++|||+|++ +.++++||.++|+++|++++.+ . .|+++++++ +.
T Consensus 6 i~~~~~~~~~~~~~l~~~ps~s~~------e~~~~~~l~~~l~~~g~~~~~~--~-------------~nv~a~~~g~~~ 64 (356)
T 3ct9_A 6 IPTMTAEAVSLLKSLISIPSISRE------ETQAADFLQNYIEAEGMQTGRK--G-------------NNVWCLSPMFDL 64 (356)
T ss_dssp HHHHHHHHHHHHHHHHTSCCBTTC------CHHHHHHHHHHHHHTTCCEEEE--T-------------TEEEEECSSCCT
T ss_pred HhHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHCCCeEEEE--e-------------eeEEEEEecCCC
Confidence 445567899999999999999983 5688999999999999998876 2 499999854 44
Q ss_pred CccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe------c-
Q psy17305 94 AKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV------T- 166 (223)
Q Consensus 94 ~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~------~- 166 (223)
+.|+|+|.|||||||.++ .|+.+||.+.+++|++||||++|||+|++++|+|++.|++.+ ++++|.++ .
T Consensus 65 ~~~~i~l~aH~D~vp~~~--~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~ 140 (356)
T 3ct9_A 65 KKPTILLNSHIDTVKPVN--GWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVS 140 (356)
T ss_dssp TSCEEEEEEECCBCCCC---------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGT
T ss_pred CCCeEEEEccccccCCCC--CCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccC
Confidence 468999999999999973 699999999999999999999999999999999999999877 66677644 2
Q ss_pred cc--------------ceeeccCcc-----------------cCCCCcCCCCccceecccchhhHHHHHHHHHHhhh
Q psy17305 167 GK--------------NVLLLPMGA-----------------SDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKVT 212 (223)
Q Consensus 167 g~--------------~~~~~~~g~-----------------~~~~ahag~~~~~g~~ai~g~~~~a~~~~~l~~l~ 212 (223)
|. .++.++++. .+.++|++. | .|+||+. .+++.+..|..+.
T Consensus 141 g~~G~~~~~~~~~~~d~~i~~ep~~~~i~~~~~G~~~~~i~~~G~~~Ha~~-p-~g~nAi~---~~~~~i~~l~~~~ 212 (356)
T 3ct9_A 141 GKEGIESVLPGLPPVSFAIVGEPTEMQPAIAEKGLMVLDVTATGKAGHAAR-D-EGDNAIY---KVLNDIAWFRDYR 212 (356)
T ss_dssp CTTTHHHHGGGSCCCSEEEECCSBTTCCEEEECCCEEEEEEEECBCCBTTS-S-CCBCTTG---GGHHHHHHHHHCC
T ss_pred CccCHHHHHhhCCCCCEEEEcCCCCceEEEeeeEEEEEEEEEECCCcccCC-C-CCCCHHH---HHHHHHHHHHhhh
Confidence 21 133333331 123899998 6 8999999 9999999988764
No 12
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.94 E-value=7.7e-27 Score=203.01 Aligned_cols=169 Identities=23% Similarity=0.357 Sum_probs=132.2
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEE
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVL 99 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~il 99 (223)
+++++++++|+++||+|+. +.++++||.++|+++|++++....+.. .|++++++. ++|+|+
T Consensus 3 ~~~~~~~~~L~~~ps~s~~------e~~~~~~l~~~l~~~g~~~~~~~~~~~-----------~n~~a~~g~--~~~~i~ 63 (377)
T 3isz_A 3 EKVVSLAQDLIRRPSISPN------DEGCQQIIAERLEKLGFQIEWMPFNDT-----------LNLWAKHGT--SEPVIA 63 (377)
T ss_dssp HHHHHHHHHHHTSCCBTTC------CTTHHHHHHHHHHHTTCEEEECCBTTB-----------CEEEEEEES--SSCEEE
T ss_pred hHHHHHHHHHhcCCCCCCC------hhhHHHHHHHHHHHCCCceEEeecCCC-----------ceEEEEeCC--CCCEEE
Confidence 5688999999999999985 346899999999999999887654321 599998843 468999
Q ss_pred EEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec----------cc-
Q psy17305 100 VYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT----------GK- 168 (223)
Q Consensus 100 l~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~----------g~- 168 (223)
|.|||||||.++.+.|+.+||.+.+++|++||||++|||+|+++++.|++.|++.+..++++|.+++ |.
T Consensus 64 l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~ 143 (377)
T 3isz_A 64 FAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTI 143 (377)
T ss_dssp EEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHH
T ss_pred EeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHH
Confidence 9999999999866789999999999999999999999999999999999999998877888887543 21
Q ss_pred --------------ceeeccCcc----------------------cCCCCcCCCCccceecccchhhHHHHHHHHHHhh
Q psy17305 169 --------------NVLLLPMGA----------------------SDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKV 211 (223)
Q Consensus 169 --------------~~~~~~~g~----------------------~~~~ahag~~~~~g~~ai~g~~~~a~~~~~l~~l 211 (223)
.+++.++.. .+.++|++. |..|+||+. .+++.+..|..+
T Consensus 144 ~~~~~~~~~~~~~d~~~~~e~~~~~~~g~~i~~g~~g~~~~~i~~~G~~~Ha~~-p~~g~nai~---~~~~~i~~l~~~ 218 (377)
T 3isz_A 144 HVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLYIQGIQGHVAY-PHLAENPIH---KAALFLQELTTY 218 (377)
T ss_dssp HHHHHHHHTTCCCCEEEECCCCBSSSTTSEEEEEECEEEEEEEEEECC--------CGGGCHHH---HHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCcccCCceEEEEcceEEEEEEEEEccccccCC-CccCcCHHH---HHHHHHHHHHhc
Confidence 022222211 023789986 899999999 999999988765
No 13
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.94 E-value=1.6e-27 Score=199.45 Aligned_cols=129 Identities=26% Similarity=0.353 Sum_probs=111.5
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTV 98 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~i 98 (223)
.+++++++++|++|||+|++. ..+++||.++|+++|++++.+..+. .+|++++++. +.|+|
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~~~~~-----------~~nv~a~~g~--~~~~i 65 (268)
T 3t68_A 5 DSPVLALAKELISRQSVTPAD------AGCQDLMIERLKALGFEIESMVFED-----------TTNFWARRGT--QSPLF 65 (268)
T ss_dssp CCHHHHHHHHHHTSCCBTTCC------TTHHHHHHHHHHHTTCEECCCEETT-----------EEC-CEEECS--SSCEE
T ss_pred HHHHHHHHHHHhCCCCCCCCc------hHHHHHHHHHHHHCCCeEEEEecCC-----------ccEEEEEeCC--CCCeE
Confidence 467899999999999999853 3688999999999999987765542 1589999853 36899
Q ss_pred EEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 99 LVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 99 ll~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
+|.|||||||.++.+.|+.+||.+.+++|++||||+.|||+|++++++|+++|++.+..++++|.+++
T Consensus 66 ~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~ 133 (268)
T 3t68_A 66 VFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLI 133 (268)
T ss_dssp EEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEE
T ss_pred EEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEE
Confidence 99999999999877789999999999999999999999999999999999999998877788887554
No 14
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.94 E-value=2.9e-26 Score=203.87 Aligned_cols=176 Identities=19% Similarity=0.235 Sum_probs=138.8
Q ss_pred cHHHHHHHHHHhhccCCCCCCCC----CchHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCCCCCCCCcEEEEEcCCC
Q psy17305 18 NKNKFIENLKEAVAIESVSSSVQ----HRPQTINMIHYFADKLKQLGAT-VEICDIGNQTLPNGESIKYPPVILGNLGND 92 (223)
Q Consensus 18 ~~~~~i~~l~~lv~i~s~s~~~~----~~~~~~~~~~~l~~~l~~~G~~-~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~ 92 (223)
..++++++|++|++|||+|+... +++++.++++||.++|+++|++ ++.++. .||++++++.
T Consensus 25 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d~~--------------~nv~a~~~g~ 90 (434)
T 3ife_A 25 MKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMDDN--------------GYVMATLPAN 90 (434)
T ss_dssp HHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEECTT--------------SCEEEEECCB
T ss_pred HHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEECCC--------------cEEEEEeCCC
Confidence 34789999999999999997432 3557889999999999999996 776532 4899998543
Q ss_pred C--CccEEEEEeccccCCCCCCCCCCCCCCceee-e---------------------------CCeEEecCC----CCCc
Q psy17305 93 K--AKHTVLVYGHLDVQPAEKEDGWNTEPFVLTL-K---------------------------DEKLYGRGA----SDDK 138 (223)
Q Consensus 93 ~--~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~-~---------------------------~~~lyGrG~----~D~K 138 (223)
. +.|+|+|+|||||||.. .+|..+||.... + +++|||||+ +|||
T Consensus 91 ~~~~~~~v~l~~H~DtVp~~--~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K 168 (434)
T 3ife_A 91 TDKDVPVIGFLAHLDTATDF--TGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDK 168 (434)
T ss_dssp SSSCCCCEEEEEECCBCTTS--CCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHH
T ss_pred CCCCCCeEEEEEEcccCCCC--CCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhH
Confidence 2 36899999999999974 469999986432 2 269999998 9999
Q ss_pred hhHHHHHHHHHHHHHccCCCceeeEEeccc-------------------ceeeccCccc------------------CCC
Q psy17305 139 GPVLGWLHAIEAFQQTKKNVPVNIKEVTGK-------------------NVLLLPMGAS------------------DDG 181 (223)
Q Consensus 139 ~gv~~~l~al~~l~~~~~~~~~~i~~~~g~-------------------~~~~~~~g~~------------------~~~ 181 (223)
+|++++|+|+++|++.+..++++|.+++.. .++.++++.. +.+
T Consensus 169 ~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~~~~d~~~~~d~~~~g~i~~~~~G~~~~~i~v~G~~ 248 (434)
T 3ife_A 169 AGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIGRGPAHFDVEAFGASFAYMMDGGPLGGLEYESFNAAGAKLTFNGTN 248 (434)
T ss_dssp HHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGTCTGGGCCHHHHCCSEEEECCCCSTTEEECCBCEEEEEEEEEECBC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccChHHHHhhhhhcCCCEEEEecCCCCCceeecCCCeEEEEEEEEEEe
Confidence 999999999999999887788888765421 1233332211 238
Q ss_pred CcCCCCccceecccchhhHHHHHHHHHHhhh
Q psy17305 182 AHSQNEKIDVRNYIEGTKLLAAYLYEISKVT 212 (223)
Q Consensus 182 ahag~~~~~g~~ai~g~~~~a~~~~~l~~l~ 212 (223)
+|++..|..|+||+. .+++.+..|..+.
T Consensus 249 ~Hag~~P~~g~nAi~---~aa~~i~~l~~~~ 276 (434)
T 3ife_A 249 THPGTAKNKMRNATK---LAMEFNGHLPVEE 276 (434)
T ss_dssp CCGGGCTTTCBCHHH---HHHHHHHTSCTTC
T ss_pred cCCCCCcccchhHHH---HHHHHHHhccccc
Confidence 999999999999999 9999999887763
No 15
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.92 E-value=2.2e-24 Score=193.26 Aligned_cols=138 Identities=27% Similarity=0.451 Sum_probs=118.3
Q ss_pred HHHHHHhcHHHHHHHHHHhhccCCCCCCC------CCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcE
Q psy17305 11 ISEYVESNKNKFIENLKEAVAIESVSSSV------QHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPV 84 (223)
Q Consensus 11 ~~~~i~~~~~~~i~~l~~lv~i~s~s~~~------~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~n 84 (223)
+.++++++.++++++|++|++|||+|++. .+.+++.++++||.++|+++|++++.. +. .+
T Consensus 5 ~~~~~~~~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~--~~------------~~ 70 (470)
T 1lfw_A 5 FKELAEAKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF--AN------------YA 70 (470)
T ss_dssp HHHHHHTTHHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE--TT------------TE
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe--cC------------eE
Confidence 56778888899999999999999999753 123456899999999999999988753 21 47
Q ss_pred EEEEcCCCCCccEEEEEeccccCCCCCCCCCCCCCCceee-eCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeE
Q psy17305 85 ILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTL-KDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIK 163 (223)
Q Consensus 85 l~a~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~-~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~ 163 (223)
+++.++. +.|+|+|+|||||||.++ .|+.+||.+.+ +||+|||||+.|||+|++++|+|+++|++.+.+++++|.
T Consensus 71 ~~~~~g~--~~~~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~ 146 (470)
T 1lfw_A 71 GRVNFGA--GDKRLGIIGHMDVVPAGE--GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKID 146 (470)
T ss_dssp EEEEECC--CSSEEEEEEECCBCCCCS--CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEE
T ss_pred EEEEeCC--CCCeEEEEEeecccCCCC--CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 7777743 368999999999999974 79999999999 999999999999999999999999999999888888888
Q ss_pred Eec
Q psy17305 164 EVT 166 (223)
Q Consensus 164 ~~~ 166 (223)
+++
T Consensus 147 ~i~ 149 (470)
T 1lfw_A 147 FVL 149 (470)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 16
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.92 E-value=4.8e-25 Score=192.07 Aligned_cols=170 Identities=18% Similarity=0.261 Sum_probs=126.4
Q ss_pred HHHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCC
Q psy17305 14 YVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDK 93 (223)
Q Consensus 14 ~i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~ 93 (223)
+++.+.++++++|++|++|||+|.... ++++.++++||.++|+ |++++.+..+. + .+|+++ +++.
T Consensus 3 ~~~~~~~~~~~~l~~l~~ips~s~~~~-~~~e~~~~~~l~~~l~--G~~~~~~~~~~-----~-----~~~~~a-~~g~- 67 (369)
T 2f7v_A 3 HMTDLLASTLEHLETLVSFDTRNPPRA-IAAEGGIFDYLRAQLP--GFQVEVIDHGD-----G-----AVSLYA-VRGT- 67 (369)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCBTTTTC-CCSSSHHHHHHHTTCT--TCEEEEEECST-----T-----CEEEEE-EESC-
T ss_pred hhhhhhHHHHHHHHHHhCCCCcCCCCC-CccHHHHHHHHHHHhC--CCceEEEEcCC-----C-----ceEEEE-EcCC-
Confidence 344556789999999999999984220 1136689999999999 99998887632 1 169999 7432
Q ss_pred CccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe------c-
Q psy17305 94 AKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV------T- 166 (223)
Q Consensus 94 ~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~------~- 166 (223)
|+|+|.|||||||.++ .|+.+||.+.++||++||||+.|||+|++++|++++. ++++|.++ .
T Consensus 68 --~~i~l~~H~D~vp~~~--~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~ 136 (369)
T 2f7v_A 68 --PKYLFNVHLDTVPDSP--HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEAN 136 (369)
T ss_dssp --CSEEEEEECCBCCCCS--SCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSS
T ss_pred --CeEEEEeeecccCCCC--CCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccC
Confidence 7899999999999973 7999999999999999999999999999999999976 44555533 2
Q ss_pred cc--------------ceeeccCcc-----------------cCCCCcCCCCcc-ceecccchhhHHHHHHHHHHhhhh
Q psy17305 167 GK--------------NVLLLPMGA-----------------SDDGAHSQNEKI-DVRNYIEGTKLLAAYLYEISKVTQ 213 (223)
Q Consensus 167 g~--------------~~~~~~~g~-----------------~~~~ahag~~~~-~g~~ai~g~~~~a~~~~~l~~l~~ 213 (223)
|. .+++++++. .+.++|++ .|. .|+||+. .+++++..|..+.+
T Consensus 137 g~~G~~~~~~~~~~~d~~i~~e~~~~~i~~~~~g~~~~~i~v~G~~~Ha~-~p~~~g~nAi~---~~~~~i~~l~~~~~ 211 (369)
T 2f7v_A 137 DPRCIAAFLARGLPYDAVLVAEPTMSEAVLAHRGISSVLMRFAGRAGHAS-GKQDPAASALH---QAMRWGGKALDHVE 211 (369)
T ss_dssp SCCHHHHHHTTCCCCSEEEECCCSTTCBBCCBCCEEEEEEEEECCCC-------CTTSCHHH---HHHHHHHHHHHHHH
T ss_pred CCcCHHHHHhcCCCCCEEEECCCCCCcceeecCceEEEEEEEeeeCcccC-CCCcCCCCHHH---HHHHHHHHHHhhhh
Confidence 21 133333321 12389999 678 8999999 99999999887754
No 17
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.91 E-value=2.7e-24 Score=188.94 Aligned_cols=178 Identities=15% Similarity=0.190 Sum_probs=131.5
Q ss_pred HHHHHHHHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEE
Q psy17305 9 AEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGN 88 (223)
Q Consensus 9 ~~~~~~i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~ 88 (223)
+.+..+++.+.++++++|++|++|||+|+. +.++++||.++|+++|++++.+..+... ..+ ..|++++
T Consensus 13 ~~~~~~~~~~~~~~~~~l~~L~~ips~s~~------E~~~~~~l~~~l~~~G~~v~~~~~~~~~-~~~-----~~nvia~ 80 (396)
T 3rza_A 13 ENLYFQGMINEQRLLNTFLELVQIDSETGN------ESTIQPILKEKFIALGLDVKEDEAAKHP-KLG-----ANNLVCT 80 (396)
T ss_dssp ------CCSCHHHHHHHHHHHHTSCCBTTC------TTTHHHHHHHHHHHTTCEEEECSGGGST-TCS-----SCCEEEE
T ss_pred cceeEEEeecHHHHHHHHHHHeecCCCCcC------HHHHHHHHHHHHHHCCCEEEEecccccc-CCC-----CceEEEE
Confidence 456778888899999999999999999984 5689999999999999998877632100 001 1599999
Q ss_pred cCCC---CCccEEEEEeccccCCCCCCCCCCCCCCceeeeC-CeEEecCC----CCCchhHHHHHHHHHHHHHccCCCce
Q psy17305 89 LGND---KAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKD-EKLYGRGA----SDDKGPVLGWLHAIEAFQQTKKNVPV 160 (223)
Q Consensus 89 ~~~~---~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~-~~lyGrG~----~D~K~gv~~~l~al~~l~~~~~~~~~ 160 (223)
+++. ++.|+|+|.|||||||++. ||.+.+++ |++||||+ +|||+|++++|.|++.|++.+. +++
T Consensus 81 ~~g~~~~~~~~~i~l~aH~D~vp~g~-------~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~ 152 (396)
T 3rza_A 81 MNSTIEEGEVPKLYLTSHMDTVVPAI-------NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHG 152 (396)
T ss_dssp ECCCCC---CCCEEEEEECCBCSSCS-------SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCC
T ss_pred ECCcCCCCCCCeEEEEEECCccCCCC-------CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCC
Confidence 8543 4578999999999999873 34445665 99999999 6999999999999999998875 567
Q ss_pred eeEEeccc---------c-----------eeeccCcc-------------------cCCCCcCCCCccceecccchhhHH
Q psy17305 161 NIKEVTGK---------N-----------VLLLPMGA-------------------SDDGAHSQNEKIDVRNYIEGTKLL 201 (223)
Q Consensus 161 ~i~~~~g~---------~-----------~~~~~~g~-------------------~~~~ahag~~~~~g~~ai~g~~~~ 201 (223)
+|.+++.. . ++.++++. .+.++|++ .|+.|+||+. .+
T Consensus 153 ~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~v~G~~~Ha~-~p~~g~nai~---~~ 228 (396)
T 3rza_A 153 QIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHAS-TPKEGVSAIN---IA 228 (396)
T ss_dssp CEEEEEESCGGGTSHHHHHCCGGGCCCSEEEEEEESSCTTCEEEEECEEEEEEEEEECBCCBTT-SGGGSBCHHH---HH
T ss_pred CEEEEEEcccccccHhHhhhchhhcccceEEEEecCCCcceEEEcCCceEEEEEEEEeEecCCC-CccccccHHH---HH
Confidence 77654321 1 12222211 12489999 8999999999 99
Q ss_pred HHHHHHHHh
Q psy17305 202 AAYLYEISK 210 (223)
Q Consensus 202 a~~~~~l~~ 210 (223)
++.+..|..
T Consensus 229 ~~~i~~l~~ 237 (396)
T 3rza_A 229 AKAISRMKL 237 (396)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHhccc
Confidence 999988754
No 18
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.91 E-value=5e-24 Score=185.59 Aligned_cols=169 Identities=17% Similarity=0.199 Sum_probs=130.4
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCC-CCccE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGND-KAKHT 97 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~-~~~~~ 97 (223)
.++++++|++|+++||+|+ ++.++++||.++|+++|++++.+..+... ..+ ..|+++++.+. ++.|+
T Consensus 5 ~~~~~~~l~~l~~~ps~s~------~e~~~~~~l~~~l~~~G~~v~~~~~~~~~-~~~-----~~nv~a~~~g~~~~~~~ 72 (373)
T 3gb0_A 5 QERLVNEFMELVQVDSETK------FEAEICKVLTKKFTDLGVEVFEDDTMAVT-GHG-----AGNLICTLPATKDGVDT 72 (373)
T ss_dssp HHHHHHHHHHHHTSCCBTT------CCHHHHHHHHHHHHHTTCEEEECSCHHHH-CCS-----SCCEEEEECCSSTTCCC
T ss_pred HHHHHHHHHHHhcccCCCc------cHHHHHHHHHHHHHHCCCEEEEecccccc-CCC-----ceeEEEEecCCCCCCCE
Confidence 4789999999999999998 46789999999999999998876541000 001 15999998543 45789
Q ss_pred EEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCC----CCCchhHHHHHHHHHHHHHccCCCceeeEEeccc-----
Q psy17305 98 VLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGA----SDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVTGK----- 168 (223)
Q Consensus 98 ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~----~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~g~----- 168 (223)
|+|.|||||||++. ||.+.+++|++||||+ +|||+|++++|.+++.|++.+. ++++|.+++..
T Consensus 73 v~l~aH~D~vp~~~-------~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g 144 (373)
T 3gb0_A 73 IYFTSHMDTVVPGN-------GIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESG 144 (373)
T ss_dssp EEEEEECCBCSSCS-------SCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGT
T ss_pred EEEEEECcccCCCC-------CcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccC
Confidence 99999999999863 4566889999999999 6999999999999999999875 56777654321
Q ss_pred ----c-----------eeeccCcc-------------------cCCCCcCCCCccceecccchhhHHHHHHHHHHh
Q psy17305 169 ----N-----------VLLLPMGA-------------------SDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISK 210 (223)
Q Consensus 169 ----~-----------~~~~~~g~-------------------~~~~ahag~~~~~g~~ai~g~~~~a~~~~~l~~ 210 (223)
. ++.++++. .+.++|++..|+.|+||+. .+++.+..|..
T Consensus 145 ~~Ga~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~---~~~~~i~~l~~ 217 (373)
T 3gb0_A 145 LVGAKALDRERITAKYGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAIT---IAAKAIAKMPL 217 (373)
T ss_dssp SHHHHHSCGGGCCCSEEEEEEECSCTTEEEEEECEEEEEEEEEECBCCBTTTCGGGSBCHHH---HHHHHHTTSCC
T ss_pred chhhhhhCHHhcCCCEEEEEcCCCCCCeEEEcCCCcEEEEEEEEeEecCCCCChhhCcCHHH---HHHHHHHhccc
Confidence 1 12222211 1248999999999999999 99998887754
No 19
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.91 E-value=7.7e-24 Score=184.16 Aligned_cols=163 Identities=20% Similarity=0.250 Sum_probs=128.4
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGAT-VEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHT 97 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~-~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~ 97 (223)
.+++++++++|+++||+|+ ++.++++||.++|+++|++ ++....+ +|++++++++ ++|+
T Consensus 12 ~~~~~~~~~~l~~~ps~s~------~e~~~~~~l~~~l~~~G~~~~~~~~~~-------------~~~~a~~~~~-~~~~ 71 (369)
T 3tx8_A 12 LGDPIVLTQRLVDIPSPSG------QEKQIADEIEDALRNLNLPGVEVFRFN-------------NNVLARTNRG-LASR 71 (369)
T ss_dssp CSCHHHHHHHHHSSCCBTT------CTHHHHHHHHHHHHTTTCTTCEEEEET-------------TEEEEECCCC-CSCE
T ss_pred HHHHHHHHHHHhcCCCCCc------cHHHHHHHHHHHHHhcCCCCcEEeccC-------------CcEEEEecCC-CCCe
Confidence 4678999999999999998 4578999999999999883 5554433 5999998654 4689
Q ss_pred EEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec------cc---
Q psy17305 98 VLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT------GK--- 168 (223)
Q Consensus 98 ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~------g~--- 168 (223)
|+|.|||||||+++ ||.+.+++|++||||++|||+|++++|+|+++|++. ..++++|.+++ |+
T Consensus 72 v~l~~H~D~vp~~~-------~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~ 143 (369)
T 3tx8_A 72 VMLAGHIDTVPIAD-------NLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLN 143 (369)
T ss_dssp EEEEEECCBSCCCS-------CCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSC
T ss_pred EEEEcccCccCCCC-------CCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccc
Confidence 99999999999973 566688999999999999999999999999999874 35677776443 21
Q ss_pred ----------------ceeeccCcc-----------------cCCCCcCCCCccceecccchhhHHHHHHHHHHhhhh
Q psy17305 169 ----------------NVLLLPMGA-----------------SDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKVTQ 213 (223)
Q Consensus 169 ----------------~~~~~~~g~-----------------~~~~ahag~~~~~g~~ai~g~~~~a~~~~~l~~l~~ 213 (223)
.++.++++. .+.++|++ .|..|+||+. .+++++..|..+..
T Consensus 144 G~~~~~~~~~~~~~~~~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha~-~p~~g~nAi~---~~a~~i~~l~~~~~ 217 (369)
T 3tx8_A 144 GLGHIRDEHPEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHSA-RSWLGDNAMH---KLSPIISKVAAYKA 217 (369)
T ss_dssp HHHHHHHHCGGGGCCSEEEECCCCTTCEEESBCEEEEEEEEEECBCCBTT-SGGGSBCTGG---GGHHHHHHHHHCCC
T ss_pred cHHHHHHhcccccCCCEEEEeCCCCCceeeecceEEEEEEEEeeeccccC-CCCcCcCHHH---HHHHHHHHHHhhcc
Confidence 022223221 12489998 4899999999 99999999887753
No 20
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.91 E-value=6.7e-24 Score=187.81 Aligned_cols=175 Identities=11% Similarity=0.169 Sum_probs=131.0
Q ss_pred HHHHHHHHHHhcH--HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcE
Q psy17305 7 YLAEISEYVESNK--NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPV 84 (223)
Q Consensus 7 ~~~~~~~~i~~~~--~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~n 84 (223)
+++++.++++++. +++++++++|++|||+|+ ++.++++||.++|+++|++++.+... +|
T Consensus 13 ~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~------~e~~~~~~l~~~l~~~G~~v~~~~~~-------------~~ 73 (418)
T 1xmb_A 13 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGY------EELETSKLIRSELELIGIKYRYPVAI-------------TG 73 (418)
T ss_dssp ---CHHHHHHSHHHHHHHHHHHHHHHHSCCCTT------CCHHHHHHHHHHHHHHTCCEEEEETT-------------TE
T ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCC------ChHHHHHHHHHHHHHcCCeeEeccCC-------------cE
Confidence 4556788889888 999999999999999998 46789999999999999998876532 59
Q ss_pred EEEEcCCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEE
Q psy17305 85 ILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKE 164 (223)
Q Consensus 85 l~a~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~ 164 (223)
+++++++..+ |+|+|.|||||||.++ |..+||.. ..+|++||||. |+|++++|.|+++|++.+..++++|.+
T Consensus 74 l~a~~~~~~~-~~i~l~aH~D~vp~~~---~~~~pf~~-~~~g~~~g~G~---d~~~a~~l~a~~~l~~~~~~~~~~v~~ 145 (418)
T 1xmb_A 74 VIGYIGTGEP-PFVALRADMDALPIQE---GVEWEHKS-KIAGKMHACGH---DGHVTMLLGAAKILHEHRHHLQGTVVL 145 (418)
T ss_dssp EEEEEESSSS-CEEEEEEECCCBSCCC---CCCSTTCC-SSTTCBCCSSH---HHHHHHHHHHHHHHHHTGGGCSSEEEE
T ss_pred EEEEEcCCCC-CEEEEEecccccCCCC---CCCCCccc-CCCCceEeCCc---hHHHHHHHHHHHHHHhccccCCceEEE
Confidence 9999864433 8999999999999873 88999986 56899999995 699999999999999988777788875
Q ss_pred ecc-----c---------------c-eeec------cCcc-------------------cCCCCcCCCCccceecccchh
Q psy17305 165 VTG-----K---------------N-VLLL------PMGA-------------------SDDGAHSQNEKIDVRNYIEGT 198 (223)
Q Consensus 165 ~~g-----~---------------~-~~~~------~~g~-------------------~~~~ahag~~~~~g~~ai~g~ 198 (223)
++. . + ++.+ +.|. .+.++|++ .|..|+||+.
T Consensus 146 ~~~~~EEg~~G~~~~~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has-~P~~g~nAi~-- 222 (418)
T 1xmb_A 146 IFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAA-IPQHTIDPVV-- 222 (418)
T ss_dssp EEECCTTTTCHHHHHHHTTTTTTEEEEEEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC----------CCHHHH--
T ss_pred EEeccccccccHHHHHHcCCcCCCCEEEEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccC-CCccCCCHHH--
Confidence 542 1 0 1111 0110 02389999 7999999999
Q ss_pred hHHHHHHHHHHhhh
Q psy17305 199 KLLAAYLYEISKVT 212 (223)
Q Consensus 199 ~~~a~~~~~l~~l~ 212 (223)
.+++.+..|..+.
T Consensus 223 -~~a~~i~~l~~~~ 235 (418)
T 1xmb_A 223 -AASSIVLSLQQLV 235 (418)
T ss_dssp -HHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHHH
Confidence 9999999998764
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.91 E-value=6.2e-24 Score=187.74 Aligned_cols=174 Identities=17% Similarity=0.220 Sum_probs=133.6
Q ss_pred HHHHHHHHHhhccCCCCCCCC----CchHHHHHHHHHHHHHHhcCCc-EEEEecCCCCCCCCCCCCCCcEEEEEcCCCC-
Q psy17305 20 NKFIENLKEAVAIESVSSSVQ----HRPQTINMIHYFADKLKQLGAT-VEICDIGNQTLPNGESIKYPPVILGNLGNDK- 93 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~----~~~~~~~~~~~l~~~l~~~G~~-~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~- 93 (223)
++++++|++|++|||+|+... +++++.++++||.++|+++|++ ++.+.. .|+++++++..
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~~~--------------~nvia~~~g~~~ 67 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLSEK--------------GTLMATLPANVE 67 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEECTT--------------CCEEEEECCSSC
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEECCC--------------ceEEEEECCCCC
Confidence 357889999999999997431 3446889999999999999998 665432 49999985432
Q ss_pred -CccEEEEEeccccCCCCCCCCCCCCCC-----cee-e---------------------eCCeEEecCC----CCCchhH
Q psy17305 94 -AKHTVLVYGHLDVQPAEKEDGWNTEPF-----VLT-L---------------------KDEKLYGRGA----SDDKGPV 141 (223)
Q Consensus 94 -~~~~ill~~H~DtVp~~~~~~w~~~P~-----~~~-~---------------------~~~~lyGrG~----~D~K~gv 141 (223)
+.|+|+|.|||||||.+. .|..+|| ... + .|+++||||+ .|||+|+
T Consensus 68 ~~~~~i~l~aH~D~Vp~~~--~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~ 145 (417)
T 1fno_A 68 GDIPAIGFISHVDTSPDFS--GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGV 145 (417)
T ss_dssp SCCCCEEEEEECCBCTTSC--CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHH
T ss_pred CCCCceEEEEeccccCCCC--CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhH
Confidence 368999999999999863 5988886 332 2 3679999998 9999999
Q ss_pred HHHHHHHHHHHHccCCCceeeEEeccc--------c-----------eeeccCccc------------------CCCCcC
Q psy17305 142 LGWLHAIEAFQQTKKNVPVNIKEVTGK--------N-----------VLLLPMGAS------------------DDGAHS 184 (223)
Q Consensus 142 ~~~l~al~~l~~~~~~~~~~i~~~~g~--------~-----------~~~~~~g~~------------------~~~aha 184 (223)
+++|+|++.|++.+ .++++|.+++.. . ++.+..+.. +.++|+
T Consensus 146 a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g~Ga~~~~~~~~~~d~~i~~d~~~~g~i~~~~~g~~~~~i~~~G~~~Hs 224 (417)
T 1fno_A 146 AEIMTALAVLKGNP-IPHGDIKVAFTPDEEVGKGAKHFDVEAFGAQWAYTVDGGGVGELEFENFNAASVNIKIVGNNVHP 224 (417)
T ss_dssp HHHHHHHHHHHSSS-CCCCCEEEEEESCGGGTCTTTTCCHHHHCCSEEEECCCCSTTBEECCBCEEEEEEEEEECBCCCG
T ss_pred HHHHHHHHHHHhCC-CCCCcEEEEEEeccccCCChhhhchhhcCCCEEEEeCCCCcCeeEEecCCceeEEEEEEeeccCC
Confidence 99999999999988 677777755321 1 222222111 237899
Q ss_pred CCCccceecccchhhHHHHHHHHHHhhhh
Q psy17305 185 QNEKIDVRNYIEGTKLLAAYLYEISKVTQ 213 (223)
Q Consensus 185 g~~~~~g~~ai~g~~~~a~~~~~l~~l~~ 213 (223)
+..|..|+||+. .+++.+..|..+..
T Consensus 225 ~~~p~~g~nAi~---~~a~~i~~l~~~~~ 250 (417)
T 1fno_A 225 GTAKGVMVNALS---LAARIHAEVPADEA 250 (417)
T ss_dssp GGCTTTCBCHHH---HHHHHHHTSCTTSS
T ss_pred CCCccccCCHHH---HHHHHHHhhhccCC
Confidence 988999999999 99999998877754
No 22
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.90 E-value=5.3e-24 Score=185.29 Aligned_cols=165 Identities=23% Similarity=0.271 Sum_probs=128.9
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCC--CCCcc
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGN--DKAKH 96 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~--~~~~~ 96 (223)
.+++++++++|++|||+|..+. ++.++++||.++|+++|++++.+. .|+++.+.+ +.+.|
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~---~e~~~~~~l~~~l~~~G~~~~~~~---------------~~~~~~~~~~~~~~~~ 66 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPE---QISRCAGFIMDWCAQNGIHAERMD---------------HDGIPSVMVLPEKGRA 66 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHH---HHHHHHHHHHHHHHHTTCCCEEEE---------------ETTEEEEEECSBTTEE
T ss_pred HHHHHHHHHHHHcCCCCCCCcc---hHHHHHHHHHHHHHHcCCeEEEec---------------CCCceEEEEEcCCCCC
Confidence 3678999999999999995322 688999999999999999988754 255565531 23468
Q ss_pred EEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCC---cee--eEEec-----
Q psy17305 97 TVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNV---PVN--IKEVT----- 166 (223)
Q Consensus 97 ~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~---~~~--i~~~~----- 166 (223)
+|+|.|||||||. +.+||.+.+++|++||||++|||+|++++|+|++.|++.+.++ +++ |.+++
T Consensus 67 ~i~l~aH~D~vp~------~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE 140 (364)
T 2rb7_A 67 GLLLMAHIDVVDA------EDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEE 140 (364)
T ss_dssp EEEEEEECCCCCC------CGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGG
T ss_pred eEEEECccCcCCC------CCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccc
Confidence 9999999999986 3689999999999999999999999999999999999887555 345 65432
Q ss_pred --c---c----------ceeeccCccc------------------CCCCcCCCCccceecccchhhHHHHHHHHHHhh
Q psy17305 167 --G---K----------NVLLLPMGAS------------------DDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKV 211 (223)
Q Consensus 167 --g---~----------~~~~~~~g~~------------------~~~ahag~~~~~g~~ai~g~~~~a~~~~~l~~l 211 (223)
| . .++.++.+.. +.++|++. |+.|+||+. .+++.+..|..+
T Consensus 141 ~~g~~G~~~~~~~~~~d~~i~~d~~~p~~i~~~~~G~~~~~i~v~G~~~Ha~~-P~~g~nAi~---~~~~~i~~l~~~ 214 (364)
T 2rb7_A 141 IGGMNGAAKALPLIRADYVVALDGGNPQQVITKEKGIIDIKLTCTGKAAHGAR-PWMGVNAVD---LLMEDYTRLKTL 214 (364)
T ss_dssp GTSTTTHHHHGGGCEEEEEEECSSSBTTEEEEEECEEEEEEEEEECBCEETTS-GGGSBCHHH---HHHHHHHHHHTT
T ss_pred cCchhhHHHHHhcCCCCEEEEccCCcccceEEEeeeEEEEEEEEEeecccCCC-CCCCcCHHH---HHHHHHHHHHhh
Confidence 1 1 1233222211 24899987 889999999 999999998876
No 23
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=1.1e-23 Score=187.97 Aligned_cols=192 Identities=15% Similarity=0.110 Sum_probs=128.6
Q ss_pred HHHHHHHHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEec--CCC---CCC---------
Q psy17305 9 AEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDI--GNQ---TLP--------- 74 (223)
Q Consensus 9 ~~~~~~i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~--~~~---~~~--------- 74 (223)
.++.+++++..++++++.++|+++|+.++ +|.+.+++|.++|+++|+++++... ... .++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~lh~~Pe~~~------~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (445)
T 3io1_A 3 LQLDEYLRQLAPSMTQWRRDFHLHAESGW------LEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAF 76 (445)
T ss_dssp CCHHHHHHTTHHHHHHHHHHHHHTCCCTT------CCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCCCC------cHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhh
Confidence 45778899999999999999999999998 5678999999999999999876420 000 000
Q ss_pred -----CC---CC---CC-CCcEEEEEcCCCCCccEEEEEeccccCCCCCCCCCCCCCCce---eeeCCeEEecCCCCCch
Q psy17305 75 -----NG---ES---IK-YPPVILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVL---TLKDEKLYGRGASDDKG 139 (223)
Q Consensus 75 -----~g---~~---~~-~~~nl~a~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~---~~~~~~lyGrG~~D~K~ 139 (223)
.| .. .+ ..+||+++++++.++|+|+|.+||||||+++...|.++||.. ...+|++||||. ++
T Consensus 77 ~~~~~~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGh---d~ 153 (445)
T 3io1_A 77 ERAREQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGH---DG 153 (445)
T ss_dssp HHHHTTTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTT---CT
T ss_pred hhhccccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCc---hH
Confidence 00 00 00 126999999655446899999999999998777899999986 567899999997 58
Q ss_pred hHHHHHHHHHHHHHccCCCceeeEEeccc---------------------ceeeccCc----------------------
Q psy17305 140 PVLGWLHAIEAFQQTKKNVPVNIKEVTGK---------------------NVLLLPMG---------------------- 176 (223)
Q Consensus 140 gv~~~l~al~~l~~~~~~~~~~i~~~~g~---------------------~~~~~~~g---------------------- 176 (223)
+++++|.|++.|++.+..++++|.+++.. .++.++++
T Consensus 154 ~~a~~l~aa~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~~a~~~~~ 233 (445)
T 3io1_A 154 HTAIGLGLAHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFMATTKFD 233 (445)
T ss_dssp HHHHHHHHHHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCBCEEEEEE
T ss_pred HHHHHHHHHHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCeeEEEEEE
Confidence 99999999999999877788888765421 12222211
Q ss_pred --ccCCCCcCCCCccceecccchhhHHHHHHHHHHhhh
Q psy17305 177 --ASDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISKVT 212 (223)
Q Consensus 177 --~~~~~ahag~~~~~g~~ai~g~~~~a~~~~~l~~l~ 212 (223)
+.+.++|+|..|..|+||+. .+++.+..|+.+.
T Consensus 234 i~v~Gk~~HaGs~P~~g~nAi~---~aa~~i~~l~~l~ 268 (445)
T 3io1_A 234 VQFSGVAAHAGGKPEDGRNALL---AAAQAALGLHAIP 268 (445)
T ss_dssp EEEECCCSSTTCCGGGCCCHHH---HHHHHHHHHHTCC
T ss_pred EEEEeecCCCCCCCcCCcCHHH---HHHHHHHHHHHHH
Confidence 01348999999999999999 9999999998874
No 24
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.90 E-value=1.2e-23 Score=189.81 Aligned_cols=166 Identities=17% Similarity=0.211 Sum_probs=129.5
Q ss_pred cHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCC---CC
Q psy17305 18 NKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGND---KA 94 (223)
Q Consensus 18 ~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~---~~ 94 (223)
+.+++++++++|++|||+|++ +.++++||.++|+++|++++.+.. .|+++++++. .+
T Consensus 12 ~~~~~~~~~~~L~~ips~s~~------e~~~~~~l~~~l~~~G~~v~~~~~--------------~nv~a~~~g~~g~~~ 71 (490)
T 3mru_A 12 SPAPLWQFFDKICSIPHPSKH------EEALAQYIVTWATEQGFDVRRDPT--------------GNVFIKKPATPGMEN 71 (490)
T ss_dssp SSHHHHHHHHHHHHSCCBTTC------CTTHHHHHHHHHHHTTCEEEECTT--------------CCEEEEECCCTTCTT
T ss_pred CHHHHHHHHHHHhCCCCCCCC------HHHHHHHHHHHHHHcCCEEEEcCC--------------CeEEEEEcCCCCCCC
Confidence 347899999999999999984 468999999999999998876432 4899998542 35
Q ss_pred ccEEEEEeccccCCCCCCC---CCCCCCCceeeeCCeEEecCCC---CCchhHHHHHHHHHHHHHccCCCceeeEEec--
Q psy17305 95 KHTVLVYGHLDVQPAEKED---GWNTEPFVLTLKDEKLYGRGAS---DDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT-- 166 (223)
Q Consensus 95 ~~~ill~~H~DtVp~~~~~---~w~~~P~~~~~~~~~lyGrG~~---D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~-- 166 (223)
.|+|+|.|||||||.++.+ .|..+||.+.+++|++||||+. |||+|++++|++++ +.. .++++|.+++
T Consensus 72 ~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~---~~~-~~~~~v~~~~~~ 147 (490)
T 3mru_A 72 KKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA---SKE-IKHGPIEVLLTI 147 (490)
T ss_dssp CCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH---CSS-CCCCSEEEEEES
T ss_pred CCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH---hCC-CCCCCEEEEEEc
Confidence 7899999999999997543 7999999999999999999996 99999999998763 322 3456666443
Q ss_pred ----cc---c-----------eeeccC-----------------------------cc-------cC-CCCcCCCCccce
Q psy17305 167 ----GK---N-----------VLLLPM-----------------------------GA-------SD-DGAHSQNEKIDV 191 (223)
Q Consensus 167 ----g~---~-----------~~~~~~-----------------------------g~-------~~-~~ahag~~~~~g 191 (223)
|. . .+.+.. |. .+ .++|++..|..|
T Consensus 148 ~EE~g~~Ga~~~~~~~~~~~~~~~~d~~~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g 227 (490)
T 3mru_A 148 DEEAGMTGAFGLEAGWLKGDILLNTDSEQEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTG 227 (490)
T ss_dssp CSSSTTGGGGTCCSSSCCSSEEEECCCCCTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSC
T ss_pred ccccccHhHHHhhhcccCCCEEEEcCCCCCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccC
Confidence 21 0 111110 10 12 479999999999
Q ss_pred e-cccchhhHHHHHHHHHHh
Q psy17305 192 R-NYIEGTKLLAAYLYEISK 210 (223)
Q Consensus 192 ~-~ai~g~~~~a~~~~~l~~ 210 (223)
+ ||+. .+++.+..|..
T Consensus 228 ~~nai~---~~~~~l~~l~~ 244 (490)
T 3mru_A 228 RGNANK---LIGRFLAGHAQ 244 (490)
T ss_dssp CCCHHH---HHHHHHHHHTT
T ss_pred CcCHHH---HHHHHHHHHHh
Confidence 9 9999 99999998865
No 25
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.89 E-value=4.1e-23 Score=182.00 Aligned_cols=166 Identities=9% Similarity=0.101 Sum_probs=123.1
Q ss_pred hcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCcc
Q psy17305 17 SNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKH 96 (223)
Q Consensus 17 ~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~ 96 (223)
+..+++++++++|++|||+|+ ++.++++||.++|+++|++++.+..+ .+|+++++++..+.|
T Consensus 29 ~~~~~~i~~~~~l~~ips~s~------~e~~~~~~l~~~l~~~G~~v~~~~~~------------~~nv~a~~~g~~~~~ 90 (404)
T 1ysj_A 29 AFHTRLINMRRDLHEHPELSF------QEVETTKKIRRWLEEEQIEILDVPQL------------KTGVIAEIKGREDGP 90 (404)
T ss_dssp HHHHHHHHHHHHHHHSCCCTT------CCHHHHHHHHHHHHHTTCEECCCTTC------------SSCEEEEEECSSCCC
T ss_pred HHHHHHHHHHHHHHhcCCCCC------ChHHHHHHHHHHHHHcCCceEEeccC------------CceEEEEEeCCCCCC
Confidence 345789999999999999998 35689999999999999987665443 159999985433368
Q ss_pred EEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEeccc--------
Q psy17305 97 TVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVTGK-------- 168 (223)
Q Consensus 97 ~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~g~-------- 168 (223)
+|+|.|||||||.++ |+.+||... .+|++||||. |++++++|+|++.|++.+..++++|.+++..
T Consensus 91 ~i~l~~H~D~vp~~~---~~~~Pf~~~-~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~ 163 (404)
T 1ysj_A 91 VIAIRADIDALPIQE---QTNLPFASK-VDGTMHACGH---DFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGA 163 (404)
T ss_dssp EEEEEEECCCBSCCC---CCCCTTCCS-STTCBCTTSH---HHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHH
T ss_pred EEEEEEecccccCCC---CCCCCcccC-CCCceEcCcC---hHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhH
Confidence 999999999999873 999999875 6899999994 8999999999999999876777788765421
Q ss_pred ------------c-eeec--cCcc-----------------------cCCCCcCCCCccceecccchhhHHHHHHHHHHh
Q psy17305 169 ------------N-VLLL--PMGA-----------------------SDDGAHSQNEKIDVRNYIEGTKLLAAYLYEISK 210 (223)
Q Consensus 169 ------------~-~~~~--~~g~-----------------------~~~~ahag~~~~~g~~ai~g~~~~a~~~~~l~~ 210 (223)
+ ++.+ +++. .+.++|++ .|..|+||+. .+++.+..|..
T Consensus 164 ~~~~~~g~~~~~d~~i~~h~ep~~~~g~v~~~~g~~~~g~~~~~i~v~G~~~Has-~P~~g~nAi~---~~~~~i~~l~~ 239 (404)
T 1ysj_A 164 RKVLEAGVLNGVSAIFGMHNKPDLPVGTIGVKEGPLMASVDRFEIVIKGKGGHAS-IPNNSIDPIA---AAGQIISGLQS 239 (404)
T ss_dssp HHHHHTTTTTTEEEEEEEEEETTSCTTEEEECSEEEECCEEEEEEEEECC---------CCCCHHH---HHHHHHHHHC-
T ss_pred HHHHhcCCCcCCCEEEEEecCCCCCCceEEeccChhhcccceEEEEEEccCcccc-CcccCCCHHH---HHHHHHHHHHH
Confidence 1 1121 3321 02388996 6889999999 99999998876
Q ss_pred h
Q psy17305 211 V 211 (223)
Q Consensus 211 l 211 (223)
+
T Consensus 240 ~ 240 (404)
T 1ysj_A 240 V 240 (404)
T ss_dssp -
T ss_pred H
Confidence 5
No 26
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.88 E-value=1.5e-22 Score=182.37 Aligned_cols=167 Identities=16% Similarity=0.231 Sum_probs=125.7
Q ss_pred cHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCC---CC
Q psy17305 18 NKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGND---KA 94 (223)
Q Consensus 18 ~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~---~~ 94 (223)
+.+++++++++|++|||+|+ .+.++++||.++|+++|++++.+.. .|+++++++. ++
T Consensus 9 ~~~~~~~~~~~l~~ips~s~------~e~~~~~~l~~~l~~~G~~~~~~~~--------------~nv~a~~~g~~g~~~ 68 (487)
T 2qyv_A 9 QPKLLWQWFDQICAIPHPSY------KEEQLAQFIINWAKTKGFFAERDEV--------------GNVLIRKPATVGMEN 68 (487)
T ss_dssp SSHHHHHHHHHHHHSCCBTT------CCHHHHHHHHHHHHHTTCEEEECTT--------------CCEEEEECCCTTCTT
T ss_pred CHHHHHHHHHHHHcCCCCCC------cHHHHHHHHHHHHHHcCCEEEEcCC--------------CcEEEEeCCCCCCCC
Confidence 35789999999999999997 3568999999999999998876542 3899998542 34
Q ss_pred ccEEEEEeccccCCCCCCC---CCCCCCCceeeeCCeEEecCCC---CCchhHHHHHHHHHHHHHccCCCceeeEEeccc
Q psy17305 95 KHTVLVYGHLDVQPAEKED---GWNTEPFVLTLKDEKLYGRGAS---DDKGPVLGWLHAIEAFQQTKKNVPVNIKEVTGK 168 (223)
Q Consensus 95 ~~~ill~~H~DtVp~~~~~---~w~~~P~~~~~~~~~lyGrG~~---D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~g~ 168 (223)
.|+|+|.|||||||.+... .|..+||.+.+++|++||||+. |||+|++++|++++. .+. ++++|.+++..
T Consensus 69 ~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~~~-~~~~v~~~~~~ 144 (487)
T 2qyv_A 69 RKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES---NDI-AHPELEVLLTM 144 (487)
T ss_dssp BCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC---SSS-CCSSEEEEEES
T ss_pred CCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh---CCC-CCCCEEEEEEe
Confidence 6899999999999997543 7999999999999999999997 999999999999863 332 45666654311
Q ss_pred --------------------ceeeccC--------c---------------------------ccC-CCCcCCCCccce-
Q psy17305 169 --------------------NVLLLPM--------G---------------------------ASD-DGAHSQNEKIDV- 191 (223)
Q Consensus 169 --------------------~~~~~~~--------g---------------------------~~~-~~ahag~~~~~g- 191 (223)
.++.+++ | ..+ .++|++..|..|
T Consensus 145 ~EE~g~~Ga~~~~~~~~~~d~~~~~d~~~~~~i~~g~~g~~~~~~~~~~~~~~~~~g~~~~i~v~G~~~~Hsg~~~~~g~ 224 (487)
T 2qyv_A 145 TEERGMEGAIGLRPNWLRSEILINTDTEENGEIYIGCAGGENADLELPIEYQVNNFEHCYQVVLKGLRGGHSGVDIHTGR 224 (487)
T ss_dssp CTTTTCHHHHTCCSSCCCCSEEEECCCCCTTEEEEEECEEEEEEEEEECCEEECCCSEEEEEEEECCCCCBTTTTTTSCC
T ss_pred ccccCCHHHHHHHHhccCCCEEEEEccCCCCeEEEeccCCcceeeeccccccccCCCeEEEEEEEccCCccCCcccccCC
Confidence 0111111 1 112 478999998887
Q ss_pred ecccchhhHHHHHHHHHHhh
Q psy17305 192 RNYIEGTKLLAAYLYEISKV 211 (223)
Q Consensus 192 ~~ai~g~~~~a~~~~~l~~l 211 (223)
.||+. .+++.+..|..+
T Consensus 225 ~nAi~---~~~~~i~~l~~~ 241 (487)
T 2qyv_A 225 ANAIK---VLLRFLAELQQN 241 (487)
T ss_dssp CCHHH---HHHHHHHHHHHH
T ss_pred CCHHH---HHHHHHHHHhhc
Confidence 69999 999999988775
No 27
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.82 E-value=1.5e-20 Score=165.22 Aligned_cols=167 Identities=14% Similarity=0.187 Sum_probs=127.7
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEE
Q psy17305 7 YLAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVIL 86 (223)
Q Consensus 7 ~~~~~~~~i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~ 86 (223)
+++++.+++++..+++++++++|+++|++|+ ++.++++||.++|+++|++++++..+. .+|++
T Consensus 3 ~~~~i~~~~~~~~~~~~~~~~~l~~~pe~s~------~E~~~~~~i~~~l~~~G~~v~~~~~g~-----------~~~vi 65 (394)
T 3ram_A 3 EKQQILDYIETNKYSYIEISHRIHERPELGN------EEIFASRTLIDRLKEHDFEIETEIAGH-----------ATGFI 65 (394)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHSCCCTT------CCHHHHHHHHHHHHHTTCEEEEEETTE-----------EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc------chHHHHHHHHHHHHHcCCeEEeCCCCC-----------ceEEE
Confidence 5678999999999999999999999999998 467899999999999999998876431 15999
Q ss_pred EEcCCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 87 GNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 87 a~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
++++++.++|+|+|.|||||||. +++++|. |+++ ++++.|++.|++.+..++++|.+++
T Consensus 66 a~~~g~~~g~~i~l~ah~D~vpg------------------~~ha~G~-d~~~--a~~l~aa~~L~~~~~~~~g~v~~~f 124 (394)
T 3ram_A 66 ATYDSGLDGPAIGFLAEYDALPG------------------LGHACGH-NIIG--TASVLGAIGLKQVIDQIGGKVVVLG 124 (394)
T ss_dssp EEEECSSSSCEEEEEECCCCCTT------------------TSSTTCH-HHHH--HHHHHHHHHHHTTHHHHCSEEEEEE
T ss_pred EEEeCCCCCCEEEEEEecccCCC------------------cceECCc-cHHH--HHHHHHHHHHHHhHhhCCceEEEEE
Confidence 99865444689999999999993 2456664 6664 5677788888876655677776543
Q ss_pred ----------ccceeeccCccc--------------------------------CCCCcCCCCccceecccchhhHHHHH
Q psy17305 167 ----------GKNVLLLPMGAS--------------------------------DDGAHSQNEKIDVRNYIEGTKLLAAY 204 (223)
Q Consensus 167 ----------g~~~~~~~~g~~--------------------------------~~~ahag~~~~~g~~ai~g~~~~a~~ 204 (223)
|....+++.|.. +.++|++..|+.|+||+. .+++.
T Consensus 125 ~~~EE~~~~~Ga~~~~~~~g~~~~~d~~~~~h~~~~~~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~---~a~~~ 201 (394)
T 3ram_A 125 CPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGNETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALD---AMISY 201 (394)
T ss_dssp CCCTTCCTTCCHHHHHHHHTGGGGCSEEECCEEESSBBCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHH---HHHHH
T ss_pred ECCccCCCCCchHHHHHHcCCcccCCEEEEECCccccCCCccccceeEEEEEEEccccccCCCCcCCCCHHH---HHHHH
Confidence 111011222210 238999988999999999 99999
Q ss_pred HHHHHhhhhh
Q psy17305 205 LYEISKVTQA 214 (223)
Q Consensus 205 ~~~l~~l~~~ 214 (223)
+..|..+++.
T Consensus 202 i~~l~~l~~~ 211 (394)
T 3ram_A 202 FNGVAQLRQH 211 (394)
T ss_dssp HHHHHHHGGG
T ss_pred HHHHHHHHhh
Confidence 9999888653
No 28
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.82 E-value=1.2e-19 Score=160.32 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=96.1
Q ss_pred HHHHhcHHHHHHHHHHhhccCCCCCC----CCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEE
Q psy17305 13 EYVESNKNKFIENLKEAVAIESVSSS----VQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGN 88 (223)
Q Consensus 13 ~~i~~~~~~~i~~l~~lv~i~s~s~~----~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~ 88 (223)
++++.+.++++++|++|++|||+|.. ++.+.++.++++||.++|+++|++++.+.. .|++++
T Consensus 2 ~~~~~~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~~--------------gnv~a~ 67 (423)
T 1z2l_A 2 SLITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEV--------------GNLYGR 67 (423)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECTT--------------SCEEEE
T ss_pred CcccccHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEecC--------------CcEEEE
Confidence 45666678899999999999999842 223568899999999999999998876543 389999
Q ss_pred cCCC-CCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 89 LGND-KAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 89 ~~~~-~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
+.+. ++.|+|+|.|||||||.+ |..|||+|++++|+|++.|++.+.+++++|.++
T Consensus 68 ~~g~~~~~~~i~l~~H~D~Vp~~----------------------g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i 123 (423)
T 1z2l_A 68 LNGTEYPQEVVLSGSHIDTVVNG----------------------GNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVV 123 (423)
T ss_dssp ECCSSEEEEEEEEEEECCCCTTB----------------------CSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEE
T ss_pred EcCCCCCCCEEEEEEecCCCCCC----------------------CccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEE
Confidence 8533 234899999999999985 668999999999999999999988888888754
No 29
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.79 E-value=9.9e-19 Score=157.05 Aligned_cols=113 Identities=18% Similarity=0.242 Sum_probs=92.4
Q ss_pred hcHHHHHHHHHHh-hccCCCCC-----------CCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcE
Q psy17305 17 SNKNKFIENLKEA-VAIESVSS-----------SVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPV 84 (223)
Q Consensus 17 ~~~~~~i~~l~~l-v~i~s~s~-----------~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~n 84 (223)
.+.+++++.|++| ++|||+|. ....+.++.++++||.++|+++|++++.+.. .|
T Consensus 29 ~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d~~--------------gn 94 (474)
T 2v8h_A 29 IASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDKI--------------GN 94 (474)
T ss_dssp CCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEBTT--------------CC
T ss_pred CCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEecC--------------ce
Confidence 4567899999999 99999862 1223568899999999999999998876432 38
Q ss_pred EEEEcCCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEE
Q psy17305 85 ILGNLGNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKE 164 (223)
Q Consensus 85 l~a~~~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~ 164 (223)
+++++++..+.++|+|+|||||||++ |.+|||+|++++|+|+++|++.+.+++++|.+
T Consensus 95 via~~~g~~~~~~i~l~~H~DtVp~~----------------------g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~l 152 (474)
T 2v8h_A 95 MFAVYPGKNGGKPTATGSHLDTQPEA----------------------GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCV 152 (474)
T ss_dssp EEEEECCSSCCSCEEEEECCCCCSSB----------------------CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred EEEEECCCCCCCeEEEEEecccCCCC----------------------CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 99998543234689999999999986 33699999999999999999998888888875
Q ss_pred e
Q psy17305 165 V 165 (223)
Q Consensus 165 ~ 165 (223)
+
T Consensus 153 i 153 (474)
T 2v8h_A 153 V 153 (474)
T ss_dssp E
T ss_pred E
Confidence 4
No 30
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.78 E-value=7e-19 Score=152.26 Aligned_cols=124 Identities=18% Similarity=0.218 Sum_probs=98.7
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTV 98 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~i 98 (223)
.++++++|++|++|||+|+. +..+++|+.++|+++|++++++.. .|+++++++..+.|+|
T Consensus 5 ~~~~~~~l~~lv~i~s~s~~------e~~~~~~l~~~l~~~g~~~~~d~~--------------gnl~a~~~g~~~~~~i 64 (349)
T 2gre_A 5 TKETMELIKELVSIPSPSGN------TAKIINFIENYVSEWNVETKRNNK--------------GALILTVKGKNDAQHR 64 (349)
T ss_dssp HHHHHHHHHHHHTSCCBTTC------CHHHHHHHHHHTTTSSSEEEECSS--------------SCEEEEECCSEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCcc------HHHHHHHHHHHHHHhCCEEEEecC--------------CcEEEEecCCCCCceE
Confidence 46789999999999999974 457899999999999999887633 3899998543235789
Q ss_pred EEEeccccC----------------CCCCCCCCCCCCCcee---------------------------------------
Q psy17305 99 LVYGHLDVQ----------------PAEKEDGWNTEPFVLT--------------------------------------- 123 (223)
Q Consensus 99 ll~~H~DtV----------------p~~~~~~w~~~P~~~~--------------------------------------- 123 (223)
+|+|||||| |.| +|..+||...
T Consensus 65 ll~~H~Dtv~~~v~~i~~~G~l~~~~~G---g~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l 141 (349)
T 2gre_A 65 LLTAHVDTLGAMVKEIKPDGRLSLSMIG---GFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNI 141 (349)
T ss_dssp EEEEECCBCEEEEEEECTTSCEEEEEES---SCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------C
T ss_pred EEEecccccceeEEEECCCCeEEEEecC---CCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHc
Confidence 999999999 443 4666554210
Q ss_pred ---------------------------------eeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 124 ---------------------------------LKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 124 ---------------------------------~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
..++++||| +.|||+|++++|+|++.|++.+.+++.++.+++
T Consensus 142 ~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr-~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~ 216 (349)
T 2gre_A 142 EVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSR-HLDDKVSVAILLKLIKRLQDENVTLPYTTHFLI 216 (349)
T ss_dssp EEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEES-CCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEE
T ss_pred eEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEe-eccchHHHHHHHHHHHHHHhccCCCCceEEEEE
Confidence 135899999 699999999999999999998877778887543
No 31
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.77 E-value=6.7e-18 Score=148.67 Aligned_cols=111 Identities=17% Similarity=0.146 Sum_probs=92.6
Q ss_pred HHHHHHHHHHhhccCCCCC----CCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCC-C
Q psy17305 19 KNKFIENLKEAVAIESVSS----SVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGND-K 93 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~----~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~-~ 93 (223)
.++++++|++|++|+|++. .+..+.++.++++||.++|+++|++++.+.. .|+++++++. +
T Consensus 4 ~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~~--------------gnv~a~~~g~~~ 69 (408)
T 3n5f_A 4 GERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAA--------------GNLIGRKEGTNP 69 (408)
T ss_dssp HHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECTT--------------CCEEEEECCSST
T ss_pred HHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcCC--------------CCEEEEecCCCC
Confidence 4788999999999999542 2223568999999999999999999887543 3999998543 3
Q ss_pred CccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 94 AKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 94 ~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
+.|+|+|.+||||||.+ |..|||+|++++|.+++.|++.+..++++|.++
T Consensus 70 ~~~~i~l~aH~D~v~~~----------------------g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~ 119 (408)
T 3n5f_A 70 DATVVLVGSHLDSVYNG----------------------GCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVV 119 (408)
T ss_dssp TSCEEEEEEESCCCTTB----------------------CSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEE
T ss_pred CCCEEEEEecCCCCCCC----------------------CccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEE
Confidence 47899999999999986 789999999999999999999987788887654
No 32
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.75 E-value=9.3e-18 Score=141.36 Aligned_cols=120 Identities=15% Similarity=0.181 Sum_probs=96.9
Q ss_pred HHHHHHHHHHhhccCCCCCC--CCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCcc
Q psy17305 19 KNKFIENLKEAVAIESVSSS--VQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKH 96 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~--~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~ 96 (223)
.+++++.|++|++|+|+|+. ...++++.++++||.++|+++|++++.+..... +. ...||++++++..+.+
T Consensus 6 ~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~----~~---~~~nvi~~~~g~~~~~ 78 (284)
T 1tkj_A 6 LANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSG----GA---TGYNLIANWPGGDPNK 78 (284)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEET----TE---EEEEEEEECSCSEEEE
T ss_pred HHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccC----CC---CceeEEEEEeCCCCCC
Confidence 57889999999999998863 224557889999999999999999988765210 00 0159999985432357
Q ss_pred EEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 97 TVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 97 ~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
+|+|.+||||||.+ ||+.|||+|++++|++++.|++.+.+++++|.+++
T Consensus 79 ~i~l~aH~D~v~~g---------------------~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~ 127 (284)
T 1tkj_A 79 VLMAGAHLDSVSSG---------------------AGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAW 127 (284)
T ss_dssp EEEEEEECCCCTTS---------------------CCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEE
T ss_pred EEEEEeecCCCCCC---------------------CCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence 89999999999874 59999999999999999999998878888888664
No 33
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.72 E-value=3.2e-17 Score=138.97 Aligned_cols=125 Identities=10% Similarity=0.162 Sum_probs=94.5
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcC--Cc-EEEEecCCCCCCCCCCCCCCcEEEEEcCCC-CC
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLG--AT-VEICDIGNQTLPNGESIKYPPVILGNLGND-KA 94 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G--~~-~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~-~~ 94 (223)
.+++++.|++|+++++... .++.+.++++||.++|+++| ++ ++.+...... .+ ..||++++.+. .+
T Consensus 19 ~~~~~~~l~~L~~i~sr~~---~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~--~~-----~~nvi~~~~g~~~~ 88 (299)
T 1rtq_A 19 ASQITGTISSLESFTNRFY---TTTSGAQASDWIASEWQALSASLPNASVKQVSHSG--YN-----QKSVVMTITGSEAP 88 (299)
T ss_dssp HHHHHHHHHHHHTSSCCCT---TSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETT--EE-----EEEEEEEECCSSEE
T ss_pred HHHHHHHHHHHhCcCCCCC---CCchHHHHHHHHHHHHHHhcCCcccceeeeeccCC--CC-----CceEEEEEECCCCC
Confidence 4789999999999985432 12367799999999999987 33 4444331000 00 15999998543 23
Q ss_pred ccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 95 KHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 95 ~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
.+.|+|.||+||||.. |. ++++||||+.|||+|++++|++++.|++.+.+++++|.+++
T Consensus 89 ~~~v~l~aH~D~v~~~----~~---------~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~ 147 (299)
T 1rtq_A 89 DEWIVIGGHLDSTIGS----HT---------NEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMA 147 (299)
T ss_dssp EEEEEEEEECCCCSST----TC---------CTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEE
T ss_pred CCEEEEEeccccCCCc----Cc---------CCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEE
Confidence 5789999999999842 63 25789999999999999999999999998888888888654
No 34
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.72 E-value=2.4e-18 Score=148.36 Aligned_cols=116 Identities=16% Similarity=0.131 Sum_probs=91.2
Q ss_pred HHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEEEEecc
Q psy17305 25 NLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGHL 104 (223)
Q Consensus 25 ~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~ill~~H~ 104 (223)
+|++|+++||+|++ +.+++++|+++|+++|++++.+.. .|+++++.+..+.|+|+|.|||
T Consensus 3 ~l~~L~~~~s~sg~------e~~~~~~l~~~l~~~g~~~~~d~~--------------gnlia~~~g~~~~~~v~l~aH~ 62 (340)
T 2fvg_A 3 YLKELSMMPGVSGD------EGKVRDFIKSKIEGLVDNLYTDVL--------------GNLIALKRGRDSSKKLLVSAHM 62 (340)
T ss_dssp CHHHHHHSCCBTTC------CHHHHHHHHHHHGGGSSEEEECTT--------------SCEEEEECCSEEEEEEEEEEEC
T ss_pred HHHHHHcCCCCCCc------hHHHHHHHHHHHHhhCCEEEEeCC--------------CcEEEEecCCCCCceEEEEecc
Confidence 58899999999984 457999999999999998877543 3899987543235789999999
Q ss_pred ccCCCC-------------CCCCCCCCCCcee-----------------------------------------------e
Q psy17305 105 DVQPAE-------------KEDGWNTEPFVLT-----------------------------------------------L 124 (223)
Q Consensus 105 DtVp~~-------------~~~~w~~~P~~~~-----------------------------------------------~ 124 (223)
||||.. ...+|..+||.+. +
T Consensus 63 D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i 142 (340)
T 2fvg_A 63 DEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYV 142 (340)
T ss_dssp CBCEEEEEEECTTSCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTC
T ss_pred CcCcEEEEEECCCCEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhC
Confidence 999820 0125988888652 2
Q ss_pred e-C-------------CeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 125 K-D-------------EKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 125 ~-~-------------~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
+ + +++||| +.|||+|++++|+|++.|+ .++.++.++
T Consensus 143 ~~gd~v~~~~~~~~~~~~i~gr-a~D~k~g~a~~l~a~~~l~----~~~~~i~~~ 192 (340)
T 2fvg_A 143 SIGDYVSFVSDYIEKNGRAVGK-AFDDRAGCSVLIDVLESGV----SPAYDTYFV 192 (340)
T ss_dssp CTTCEEEECCCCEEETTEEEES-CHHHHHHHHHHHHHHHTCC----CCSEEEEEE
T ss_pred CCCCEEEEccCceeecCEEeec-cCccHHHHHHHHHHHHHhh----ccCCcEEEE
Confidence 2 5 999999 9999999999999999886 355676644
No 35
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.71 E-value=2.1e-17 Score=144.24 Aligned_cols=122 Identities=14% Similarity=0.217 Sum_probs=91.8
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEE
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVL 99 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~il 99 (223)
++++++|++|+++||+|+. +.+++++|+++|+++|++++.+.. .|+++++.+....|+|+
T Consensus 7 ~~~~~~l~~L~~~~s~sg~------e~~~~~~l~~~l~~~g~~~~~d~~--------------gnlia~~~g~~~~~~vl 66 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGN------EREVRQVMKSYIEPFADEVTTDRL--------------GSLIAKKTGAENGPKIM 66 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTC------CHHHHHHHHHHHGGGCSEEEECTT--------------CCEEEEEESSTTSCEEE
T ss_pred HHHHHHHHHHHcCCCCCCc------hHHHHHHHHHHHHhhCCEEEEcCC--------------CcEEEEecCCCCCceEE
Confidence 4688999999999999984 568999999999999998876543 38999874332358999
Q ss_pred EEeccccCCC----------------CC---------------CC-------CCCCCC----------------------
Q psy17305 100 VYGHLDVQPA----------------EK---------------ED-------GWNTEP---------------------- 119 (223)
Q Consensus 100 l~~H~DtVp~----------------~~---------------~~-------~w~~~P---------------------- 119 (223)
|.|||||||. |. .+ .|. +|
T Consensus 67 l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~-~~h~~~~~~~~~~~~~~~l~id~g 145 (373)
T 1vhe_A 67 IAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSK-PPHILSPEARKKSVEIKDMFIDIG 145 (373)
T ss_dssp EEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECC-CGGGSCTTTTTSCCCGGGCEEECS
T ss_pred EEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCC-CcccCchhhccCCCChhHeEEEec
Confidence 9999999982 10 01 143 12
Q ss_pred -----------------------CceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 120 -----------------------FVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 120 -----------------------~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
|....+++++||| +.|||+|++++|+|++.|++.+ ++.++.++
T Consensus 146 ~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr-~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~ 211 (373)
T 1vhe_A 146 ASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAK-AWDNRIGCAIAIDVLRNLQNTD--HPNIVYGV 211 (373)
T ss_dssp CSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEET-THHHHHHHHHHHHHHHHHHTSC--CSSEEEEE
T ss_pred CCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEec-cCccHHHHHHHHHHHHHHhhcC--CCceEEEE
Confidence 1111137899999 6999999999999999998865 45666544
No 36
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.70 E-value=2.1e-16 Score=134.60 Aligned_cols=132 Identities=20% Similarity=0.245 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTV 98 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~i 98 (223)
.+++.+.|++|+++.+.. ..++++.++++||.++|+++|++++.+.+.... +.|+.. ...||++++++. ..+.|
T Consensus 24 ~~~~~~~l~~l~~~~~R~---~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~-~~g~~~-~~~Nvia~~~g~-~~~~i 97 (309)
T 3tc8_A 24 ADSAYAYVANQVAFGPRV---PNTAAHKACGDYLASELKRFGAKVYQQEAILTA-YDGTKL-EARNIIGSFDPE-NSKRV 97 (309)
T ss_dssp HHHHHHHHHHHHHTCCCC---TTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEC-TTSCEE-EEEEEEEEESTT-CSSEE
T ss_pred HHHHHHHHHHHHccCCCC---CCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccc-cCCCcc-cceEEEEEECCC-CCceE
Confidence 477888999998875432 234478999999999999999999887653110 011000 015999999654 35799
Q ss_pred EEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 99 LVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 99 ll~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
+|.|||||||.+. .+||. .+++++| +|+.||++|++++|++++.|.+.+ ++.+|.+++
T Consensus 98 ll~aH~Dsv~~~~-----~~p~~--~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~ 155 (309)
T 3tc8_A 98 LLFAHWDSRPYSD-----HDPDP--SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIF 155 (309)
T ss_dssp EEEEECCCCSCCT-----TCSSG--GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEE
T ss_pred EEEecccCCCCCC-----CCccc--cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence 9999999999863 36774 5788888 999999999999999999999875 567777654
No 37
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.69 E-value=2.2e-16 Score=134.72 Aligned_cols=132 Identities=17% Similarity=0.188 Sum_probs=85.6
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTV 98 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~i 98 (223)
.+++++.|++|+++++... .++++.++++||.++|+++|++++.+.+.... +.|+.. ...||++++++. ..+.|
T Consensus 26 ~~~~~~~l~~L~~~~~R~~---gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~-~~g~~~-~~~Nvia~~~g~-~~~~i 99 (314)
T 3gux_A 26 ADSAYQYIQVQADFGPRVP---NTQAHKECGEYLAGQLEKFGAKVYNQYADLIA-YDGTIL-KSRNIIGAYKPE-SKKRI 99 (314)
T ss_dssp HHHHHHHHHHHHTTCCCCT---TSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEC-TTSCEE-EEEEEEEEESTT-CSSEE
T ss_pred HHHHHHHHHHHHccCCcCC---CCHHHHHHHHHHHHHHHHCCCEEEEEEeeccc-cCCCcc-cceEEEEEECCC-CCceE
Confidence 5789999999999875332 34478999999999999999999877653110 011000 015999999654 35799
Q ss_pred EEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 99 LVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 99 ll~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
+|.|||||||.++ .+|+ ..+++. +.||+.||++|++++|++++.|.+.+ ++.+|.+++
T Consensus 100 ll~aH~Dsv~~~~-----~~p~--~~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~ 157 (314)
T 3gux_A 100 LLCAHWDSRPYAD-----NDPD--PKNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVF 157 (314)
T ss_dssp EEEEECCCCC----------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEE
T ss_pred EEEccccCCCcCC-----CCcc--cccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence 9999999999863 3465 344444 45999999999999999999999875 667777654
No 38
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.69 E-value=2.3e-17 Score=141.66 Aligned_cols=114 Identities=19% Similarity=0.295 Sum_probs=89.6
Q ss_pred HHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEEEE
Q psy17305 22 FIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVY 101 (223)
Q Consensus 22 ~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~ill~ 101 (223)
++++|++|+++||+|++ +.+++++|+++|+++|+ ++.+.. .|+++++++ +.|+|+|.
T Consensus 4 ~~~~l~~l~~~~s~sg~------e~~~~~~l~~~l~~~g~-~~~d~~--------------gnlia~~~~--~~~~i~l~ 60 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGY------EERIREEIIREIKDFAD-YKVDAI--------------GNLIVELGE--GEERILFM 60 (332)
T ss_dssp HHHHHHHHHTSCCBTTC------CHHHHHHHHHHHTTTCC-CEECTT--------------CCEEEEEES--SSEEEEEE
T ss_pred HHHHHHHHHcCCCCCCc------HHHHHHHHHHHHhhcCc-EEEcCC--------------CeEEEEecC--CCceEEEE
Confidence 67899999999999984 46899999999999999 665322 489998754 35899999
Q ss_pred eccccCC----------------CCCCCCCCC------------------------------------------------
Q psy17305 102 GHLDVQP----------------AEKEDGWNT------------------------------------------------ 117 (223)
Q Consensus 102 ~H~DtVp----------------~~~~~~w~~------------------------------------------------ 117 (223)
||||||+ .| +|..
T Consensus 61 aH~D~v~~~v~~i~~~G~l~~~~~G---g~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~ 137 (332)
T 2wyr_A 61 AHMDEIGLLITGITDEGKLRFRKVG---GIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGA 137 (332)
T ss_dssp EECCBCEEEEEEECTTSCEEEEEES---CCCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSC
T ss_pred eccCcccEEEEEECCCCeEEEEecC---CcChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCC
Confidence 9999994 44 2321
Q ss_pred -------------------CCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 118 -------------------EPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 118 -------------------~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
+||.. ..++++||| +.|||+|++++|+|++.|++.+ ++.++.++
T Consensus 138 ~~~~~~~~~i~~Gd~~~~~~~~~~-~~~~~i~gr-a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~ 200 (332)
T 2wyr_A 138 ESKEEALELVKPLDFAVFKKHFSV-LNGKYVSTR-GLDDRFGVVALIEAIKDLVDHE--LEGKVIFA 200 (332)
T ss_dssp SSHHHHHHHCCTTCEEEECCCCEE-ETTTEEECT-THHHHHHHHHHHHHHHTTTTSC--CSSEEEEE
T ss_pred CCHHHHHhhCCCCCEEEEccccEE-ecCCeEEcc-cCCcHHHHHHHHHHHHHHhhcC--CCceEEEE
Confidence 13332 378999999 9999999999999999998765 45666654
No 39
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.61 E-value=7.6e-15 Score=126.00 Aligned_cols=125 Identities=18% Similarity=0.244 Sum_probs=90.7
Q ss_pred HHHH-HHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHh--cCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCc
Q psy17305 19 KNKF-IENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQ--LGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAK 95 (223)
Q Consensus 19 ~~~~-i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~--~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~ 95 (223)
.+++ .+.|++|+....+. +++..++++||.++|++ +|++++.+...... +.|. ....||++++++. +.
T Consensus 30 ~~~~~~~~l~~L~~~r~~~-----s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~-~~g~--~~~~Nvi~~~~g~-~~ 100 (329)
T 2afw_A 30 ISEMWQNDLQPLLIERYPG-----SPGSYAARQHIMQRIQRLQADWVLEIDTFLSQT-PYGY--RSFSNIISTLNPT-AK 100 (329)
T ss_dssp HHHHHHHTTGGGCSCCCTT-----SHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECC-TTSS--EEEEEEEEESSTT-SS
T ss_pred HHHHHHHHHHHHcCCCCCC-----CHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecC-CCCC--ceEeEEEEEECCC-CC
Confidence 4678 88889996433322 22566899999999999 99998887643210 0010 0016999999654 46
Q ss_pred cEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHc--------cCCCceeeEEec
Q psy17305 96 HTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQT--------KKNVPVNIKEVT 166 (223)
Q Consensus 96 ~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~--------~~~~~~~i~~~~ 166 (223)
+.|+|.||+||||.+ .|. +++ |+|+.||++|++++|++++.|.+. +.+++.+|.+++
T Consensus 101 ~~i~l~aH~Dsv~~~---~~~----------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~ 165 (329)
T 2afw_A 101 RHLVLACHYDSKYFS---HWN----------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIF 165 (329)
T ss_dssp EEEEEEEECCCCCCC---CBT----------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEE
T ss_pred cEEEEEEeccCCCcC---ccc----------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEE
Confidence 889999999999975 242 444 899999999999999999999886 346778888776
No 40
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.60 E-value=8.9e-16 Score=132.84 Aligned_cols=65 Identities=17% Similarity=0.232 Sum_probs=55.0
Q ss_pred HHHHHHHhhccCCCCCCCCCchHH-HHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEEE
Q psy17305 22 FIENLKEAVAIESVSSSVQHRPQT-INMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLV 100 (223)
Q Consensus 22 ~i~~l~~lv~i~s~s~~~~~~~~~-~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~ill 100 (223)
++++|++|+++||+|++ + .+++++|+++|+++|++++.+.. .|+++++++. .|+|+|
T Consensus 8 ~~~~l~~L~~~~s~sg~------e~~~~~~~l~~~l~~~g~~~~~d~~--------------gnlia~~~g~--~~~i~l 65 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGY------EFLGIRDVVIEEIKDYVDEVKVDKL--------------GNVIAHKKGE--GPKVMI 65 (353)
T ss_dssp CHHHHHHHHHSCCBTTC------GGGTHHHHHHHHHGGGSSEEEECTT--------------CCEEEEECCS--SCEEEE
T ss_pred HHHHHHHHHhCCCCCcc------chHHHHHHHHHHHHhhCCeEEEcCC--------------CCEEEEecCC--CccEEE
Confidence 57899999999999984 4 67999999999999998877543 3899987543 589999
Q ss_pred EeccccCC
Q psy17305 101 YGHLDVQP 108 (223)
Q Consensus 101 ~~H~DtVp 108 (223)
.||+|||+
T Consensus 66 ~aH~D~v~ 73 (353)
T 1y0y_A 66 AAHMDQIG 73 (353)
T ss_dssp EEECCBCE
T ss_pred EeccCccc
Confidence 99999995
No 41
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.51 E-value=4.9e-14 Score=121.43 Aligned_cols=67 Identities=12% Similarity=0.162 Sum_probs=56.0
Q ss_pred HHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEEE
Q psy17305 21 KFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLV 100 (223)
Q Consensus 21 ~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~ill 100 (223)
+++++|++|+++||+|++ +.+++++|+++|+++|++++.+.. .|+++++.+. +.|.|+|
T Consensus 6 ~~~~~l~~Lv~~~s~sg~------e~~~~~~l~~~l~~~g~~~~~d~~--------------gnlia~~~g~-~~~~i~l 64 (346)
T 1vho_A 6 ETGKLLMELSNLDGPSGY------ETNVVSYIKSVIEPFVDEAKTTRH--------------GSLIGYKKGK-GIGKLAF 64 (346)
T ss_dssp CHHHHHHHHHHSCCBTTC------CHHHHHHHHHHHGGGCSEEEECTT--------------SCEEEEECCS-SSCEEEE
T ss_pred HHHHHHHHHHcCCCCCcc------hHHHHHHHHHHHHhhCCEEEEecC--------------CcEEEEEcCC-CCceEEE
Confidence 568899999999999984 567999999999999998877543 3899987543 2588999
Q ss_pred EeccccCC
Q psy17305 101 YGHLDVQP 108 (223)
Q Consensus 101 ~~H~DtVp 108 (223)
.||+|||+
T Consensus 65 ~aH~DtV~ 72 (346)
T 1vho_A 65 FAHVDEIG 72 (346)
T ss_dssp EEECCBCC
T ss_pred EecCcccc
Confidence 99999995
No 42
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.51 E-value=1.3e-14 Score=121.96 Aligned_cols=90 Identities=17% Similarity=0.178 Sum_probs=72.2
Q ss_pred HHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEEEEe
Q psy17305 23 IENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYG 102 (223)
Q Consensus 23 i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~ill~~ 102 (223)
+++|++|++|||+|++ ++..+++||+++|+++|++++++..+ ||+++++++ +|+|+|.|
T Consensus 12 ~elL~~Lv~ipS~sg~-----E~~~v~~~l~~~l~~~G~~v~~D~~G--------------Nlia~~~g~--~p~lll~~ 70 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGY-----EHLGIRDIVVDVLKEVADEVKVDKLG--------------NVIAHFKGS--SPRIMVAA 70 (354)
T ss_dssp HHHHHHHHHSCCBTTC-----GGGTHHHHHHHHHHTTSSEEEECTTC--------------CEEEEECCS--SSEEEEEE
T ss_pred HHHHHHHhcCCCCCcc-----hHHHHHHHHHHHHHHcCCEEEEeCCC--------------eEEEEECCC--CceEEEEe
Confidence 4789999999999985 23468899999999999999887654 999999754 68999999
Q ss_pred ccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHH
Q psy17305 103 HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVL 142 (223)
Q Consensus 103 H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~ 142 (223)
||||||... ....++++++++|..++++.++
T Consensus 71 H~Dtvp~~v---------~~~~~~g~~~~~~~~~~~~~~~ 101 (354)
T 2wzn_A 71 HMDKIGVMV---------NHIDKDGYLHIVPIGGVLPETL 101 (354)
T ss_dssp ECCBCEEEE---------EEECTTSCEEEEEESSCCGGGG
T ss_pred ccccCCCcC---------CeeecCCceeeccCCCccHHHH
Confidence 999998752 2245678889888777766544
No 43
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.49 E-value=6.1e-14 Score=120.76 Aligned_cols=64 Identities=17% Similarity=0.243 Sum_probs=53.5
Q ss_pred HHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEEEEec
Q psy17305 24 ENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGH 103 (223)
Q Consensus 24 ~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~ill~~H 103 (223)
++|++|+++||+|++ +.++++||+++|+++|++++.+.. .|+++++.+. +.|+|+|.||
T Consensus 7 ~~l~~Lv~~~s~sg~------e~~~~~~l~~~l~~~g~~v~~d~~--------------gnlia~~~g~-~~~~vll~aH 65 (348)
T 1ylo_A 7 SLLKALSEADAIASS------EQEVRQILLEEAARLQKEVRFDGL--------------GSVLIRLNES-TGPKVMICAH 65 (348)
T ss_dssp HHHHHHHHSCCBTTB------CHHHHHHHHHHHHHTTCCEEECTT--------------CCEEEECCCC-SSCEEEEEEE
T ss_pred HHHHHHHcCCCCCCc------hHHHHHHHHHHHHhhCCEEEEecC--------------CCEEEEecCC-CCceEEEEEc
Confidence 689999999999984 557899999999999999876543 3899987543 3578999999
Q ss_pred cccCC
Q psy17305 104 LDVQP 108 (223)
Q Consensus 104 ~DtVp 108 (223)
+|||+
T Consensus 66 ~DtV~ 70 (348)
T 1ylo_A 66 MDEVG 70 (348)
T ss_dssp CCCCE
T ss_pred CCccc
Confidence 99995
No 44
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.42 E-value=1.6e-14 Score=123.59 Aligned_cols=117 Identities=12% Similarity=0.041 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTV 98 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~i 98 (223)
.++++++|++|+++||+|++ +..++++|+++|+++|++++.+..... .++ ..|+++.+++ + |+|
T Consensus 16 ~~~~~~~l~~Lv~i~s~sg~------e~~v~~~l~~~l~~~g~~v~~d~~~~~--~~~-----~gnlia~~~g--~-~~i 79 (321)
T 3cpx_A 16 YFQGMQLLKELCSIHAPSGN------EEPLKDFILEYIRSNAGSWSYQPVIYA--DND-----LQDCIVLVFG--N-PRT 79 (321)
T ss_dssp GCCHHHHHHHHHHSCCBTTC------CHHHHHHHHHHHHHHGGGSSSCCEEEC--SGG-----GTTCEEEEES--S-CSE
T ss_pred HHHHHHHHHHHHcCCCCCCC------HHHHHHHHHHHHHhhCCeEEEcccccc--ccC-----CccEEEEecC--C-ceE
Confidence 45689999999999999984 567899999999999998765541000 000 0388888754 3 789
Q ss_pred EEEeccccCC-----------CCCCCCCCCCCCce--------------------------------------eeeCCeE
Q psy17305 99 LVYGHLDVQP-----------AEKEDGWNTEPFVL--------------------------------------TLKDEKL 129 (223)
Q Consensus 99 ll~~H~DtVp-----------~~~~~~w~~~P~~~--------------------------------------~~~~~~l 129 (223)
+|.||||||+ .|....|...++.. ...++++
T Consensus 80 ll~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i 159 (321)
T 3cpx_A 80 AVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFI 159 (321)
T ss_dssp EEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEE
T ss_pred EEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEE
Confidence 9999999993 33111121111111 1113788
Q ss_pred EecCCCCCchhHHHHHHHHHHHH
Q psy17305 130 YGRGASDDKGPVLGWLHAIEAFQ 152 (223)
Q Consensus 130 yGrG~~D~K~gv~~~l~al~~l~ 152 (223)
||| ..|||+|+++++++++.++
T Consensus 160 ~~~-~~D~k~G~aa~l~al~~l~ 181 (321)
T 3cpx_A 160 LTP-YLDDRLGVWTALELAKTLE 181 (321)
T ss_dssp ECT-THHHHHHHHHHHHHTTTCC
T ss_pred EEc-CCcCHHHHHHHHHHHHHhc
Confidence 888 5899999999999998764
No 45
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.41 E-value=5.7e-12 Score=108.03 Aligned_cols=124 Identities=18% Similarity=0.231 Sum_probs=86.7
Q ss_pred HHHHHH-HHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhc--CCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCc
Q psy17305 19 KNKFIE-NLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQL--GATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAK 95 (223)
Q Consensus 19 ~~~~i~-~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~--G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~ 95 (223)
.+++.+ .|+.+ -++...+ +++..++++||.++|+++ |++++.+.+.... +.|. ....||++++++.. .
T Consensus 38 ~~~~~~~~L~~~-~~~R~~g----S~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~-~~g~--~~~~Nvia~~~g~~-~ 108 (330)
T 3pb6_X 38 PQRLWSTYLRPL-LVVRTPG----SPGNLQVRKFLEATLRSLTAGWHVELDPFTAST-PLGP--VDFGNVVATLDPRA-A 108 (330)
T ss_dssp HHHHHHHTTGGG-CSCCCTT----SHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEE-TTEE--EEEEEEEEESCTTS-S
T ss_pred HHHHHHHHHHHH-hCCCCCC----CHHHHHHHHHHHHHHHHhCCCCeEEEEeeeccc-ccCC--ccceEEEEEECCCC-C
Confidence 355655 45555 3344333 447889999999999999 8988887653110 0000 00159999996543 5
Q ss_pred cEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHc-----cCCCceeeEEec
Q psy17305 96 HTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQT-----KKNVPVNIKEVT 166 (223)
Q Consensus 96 ~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~-----~~~~~~~i~~~~ 166 (223)
+.|++.+|||||+.... .. ..+|+.|+++|++++|++++.|.+. +.+++.+|.+++
T Consensus 109 ~~ivl~aH~Dsv~~~~g----~~-----------~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~ 169 (330)
T 3pb6_X 109 RHLTLACHYDSKLFPPG----ST-----------PFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLF 169 (330)
T ss_dssp EEEEEEEECCCCCCCTT----SC-----------CCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEE
T ss_pred ceEEEEeccCCCCCCCC----Cc-----------CcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEE
Confidence 78999999999975210 01 2469999999999999999999874 356788898876
No 46
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.32 E-value=5.3e-11 Score=101.18 Aligned_cols=119 Identities=14% Similarity=0.199 Sum_probs=84.8
Q ss_pred HHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEEEEec
Q psy17305 24 ENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLVYGH 103 (223)
Q Consensus 24 ~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~ill~~H 103 (223)
+.|..++ +|.+.+ +++..++++||.+.|+++|++++.+...... +.+..++ ..|||+++++.. .+.|+|.+|
T Consensus 15 ~~l~~il-~PR~~g----s~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~-~~~~~~~-~~Nii~~~~~~~-~~~vvl~aH 86 (312)
T 4f9u_A 15 RTLDSIL-VPRVVG----SRGHQQVREYLVQSLNGLGFQTEVDEFKQRV-PVFGELT-FANVVGTINPQA-QNFLALACH 86 (312)
T ss_dssp HHHHHHC-SCCCTT----SHHHHHHHHHHHHHHHHTTCEEEEEEEEEEE-TTTEEEE-EEEEEEEESTTS-SEEEEEEEE
T ss_pred HHHHHhc-CCCCCC----CHHHHHHHHHHHHHHHHCCCeEEEEeEEEec-CCCCcee-EEEEEEEECCCC-CceEEEEEE
Confidence 3455543 576555 3478899999999999999999887653210 0000000 159999997643 578999999
Q ss_pred cccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHc-----cCCCceeeEEec
Q psy17305 104 LDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQT-----KKNVPVNIKEVT 166 (223)
Q Consensus 104 ~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~-----~~~~~~~i~~~~ 166 (223)
||+++.+. ..+ .+|+.|+.+|++++|++++.|.+. +.+++++|+|++
T Consensus 87 yDs~~~~~-----~~~-----------~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~ 138 (312)
T 4f9u_A 87 YDSKYFPN-----DPG-----------FVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIF 138 (312)
T ss_dssp CCCCCCTT-----CTT-----------CCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEE
T ss_pred EecCCCCC-----CCC-----------CCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEE
Confidence 99997642 112 249999999999999999999763 446788898876
No 47
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.32 E-value=1.8e-11 Score=104.04 Aligned_cols=132 Identities=20% Similarity=0.242 Sum_probs=91.7
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEE
Q psy17305 19 KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTV 98 (223)
Q Consensus 19 ~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~i 98 (223)
.++..+.+++++++.. +...+++..++++||.+.|+++|++++.+...... ..|+.++ ..|||+++++.. .+.|
T Consensus 24 ~~~a~~~l~~l~~fgp---R~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~-~~~~~~~-~~Nii~~~~g~~-~~~i 97 (309)
T 4fuu_A 24 ADSAYLYVKNQVDFGP---RVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIA-YDGTLLK-ARNIIGSYKPES-KKRI 97 (309)
T ss_dssp HHHHHHHHHHHHTTCC---CCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEC-TTSCEEE-EEEEEEEESTTC-SSEE
T ss_pred HHHHHHHHHHHhCcCC---cCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEecc-CCCCcce-eEEEEEEECCCC-CceE
Confidence 4778889999998632 22234578899999999999999999877653211 1121000 159999996643 5789
Q ss_pred EEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 99 LVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 99 ll~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
+|.+||||+|.++.+.. ........+|+.|+.+|++++|++++.|.+.. ++.+|.+++
T Consensus 98 ~l~aH~Ds~~~~~~~~~--------~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~~--~~~~i~~~~ 155 (309)
T 4fuu_A 98 ALFAHWDTRPWADNDAD--------EKNHHTPILGANDGASGVGALLEIARLVNQQQ--PELGIDIIF 155 (309)
T ss_dssp EEEEECCCCSCCTTCSS--------GGGTTSCCCCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEE
T ss_pred EEEeecCCCCCCCCccc--------cccccCCcCCcccCchhHHHHHHHHHHHhhcC--CCCceEEEe
Confidence 99999999987632111 11112233599999999999999999998854 566676543
No 48
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.30 E-value=7.9e-11 Score=101.00 Aligned_cols=131 Identities=18% Similarity=0.228 Sum_probs=90.2
Q ss_pred HHHHHHhc-HHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEc
Q psy17305 11 ISEYVESN-KNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNL 89 (223)
Q Consensus 11 ~~~~i~~~-~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~ 89 (223)
+.++.+.. ...+-+.|..+. +|.+.+. ++..++++||.+.|+++|++++.+.+.......|. ++ ..|||+++
T Consensus 28 ~~~~~~~~~~~~~~~~l~~il-~pR~~Gs----~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~-~~-~~Nii~~~ 100 (330)
T 4fai_A 28 FLEYSNLSDKLHLREAIDKIL-IPRVVGT----TNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGK-LH-FHNIIATL 100 (330)
T ss_dssp HHHHHTCCCHHHHHHHHHHHC-SCCCTTS----HHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEE-EE-EEEEEEES
T ss_pred HHhcccccHHHHHHHHHHhhc-CCCCCCC----HHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCc-ee-EEEEEEEE
Confidence 44444432 234445555553 5766553 37889999999999999999988765421100010 00 15999999
Q ss_pred CCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHc---cCCCceeeEEec
Q psy17305 90 GNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQT---KKNVPVNIKEVT 166 (223)
Q Consensus 90 ~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~---~~~~~~~i~~~~ 166 (223)
+++. ...|+|.+|||+++..+. + .+|+.|+.+|++++|++++.|.+. +.++..+|.|++
T Consensus 101 ~~~~-~~~i~l~aHyDs~~~~~~------~-----------~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~ 162 (330)
T 4fai_A 101 NPNA-ERYLVLSCHYDSKYMPGV------E-----------FLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLF 162 (330)
T ss_dssp CTTC-SEEEEEEEECCCCCCTTS------C-----------CCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEE
T ss_pred CCCC-CcEEEEEEeecccccccC------C-----------CCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEE
Confidence 7653 568999999999975421 1 249999999999999999999763 456778888775
No 49
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.02 E-value=3.4e-10 Score=97.97 Aligned_cols=68 Identities=24% Similarity=0.307 Sum_probs=58.5
Q ss_pred HHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCC-CccEEE
Q psy17305 21 KFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDK-AKHTVL 99 (223)
Q Consensus 21 ~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~-~~~~il 99 (223)
+++++|++|+++||+|+. +.++++|++++|+++|++++.+..+ |+++++++.. +.|+|+
T Consensus 4 ~~~~~l~~L~~ips~SG~------E~~v~~~l~~~l~~~g~~~~~D~~G--------------Nli~~~~g~~~~~~~v~ 63 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGH------EAPVRAYLREKLTPHVDEVVTDGLG--------------GIFGIKHSEAVDAPRVL 63 (355)
T ss_dssp HHHHHHHHHHTSCCBTTC------CHHHHHHHHHHHGGGSSEEEECTTS--------------CEEEEECCCSTTCCEEE
T ss_pred HHHHHHHHHHhCCCCCCC------HHHHHHHHHHHHHHhCCEEEECCCC--------------eEEEEECCcCCCCCeEE
Confidence 468899999999999994 6789999999999999988877654 9999985543 478999
Q ss_pred EEeccccCC
Q psy17305 100 VYGHLDVQP 108 (223)
Q Consensus 100 l~~H~DtVp 108 (223)
|.||||||+
T Consensus 64 l~aHmD~Vg 72 (355)
T 3kl9_A 64 VASHMDEVG 72 (355)
T ss_dssp EEEECCBCE
T ss_pred EEecccccc
Confidence 999999995
No 50
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.86 E-value=1.8e-09 Score=93.32 Aligned_cols=67 Identities=16% Similarity=0.261 Sum_probs=57.5
Q ss_pred HHHHHHHHhhccCCCCCCCCCchHHH-HHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEE
Q psy17305 21 KFIENLKEAVAIESVSSSVQHRPQTI-NMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVL 99 (223)
Q Consensus 21 ~~i~~l~~lv~i~s~s~~~~~~~~~~-~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~il 99 (223)
.++++|++|+++||+|+ .+. ++++|++++|+++|++++.+..+ |+++++++. .|+|+
T Consensus 10 ~~~~~l~~L~~ipspSG------~E~~~v~~~l~~~l~~~g~~~~~D~~G--------------Nvi~~~~g~--~~~v~ 67 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVSG------YEHLGIRDIVVDVLKEVADEVKVDKLG--------------NVIAHFKGS--SPRIM 67 (354)
T ss_dssp CCHHHHHHHHHSCCBTT------CGGGTHHHHHHHHHHTTCSEEEECTTC--------------CEEEEECCS--SSEEE
T ss_pred HHHHHHHHHHhCCCCCc------ccHHHHHHHHHHHHHHhCCEEEEcCCC--------------eEEEEEcCC--CCEEE
Confidence 36789999999999999 467 89999999999999988887654 999998643 38999
Q ss_pred EEeccccCCC
Q psy17305 100 VYGHLDVQPA 109 (223)
Q Consensus 100 l~~H~DtVp~ 109 (223)
|.||||||+.
T Consensus 68 l~aHmDtVg~ 77 (354)
T 2vpu_A 68 VAAHMDKIGV 77 (354)
T ss_dssp EECCCCBCEE
T ss_pred EEecccccce
Confidence 9999999953
No 51
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.72 E-value=1e-08 Score=88.14 Aligned_cols=65 Identities=14% Similarity=0.151 Sum_probs=56.8
Q ss_pred HHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCCCCCcEEEEEcCCCCCccEEEE
Q psy17305 21 KFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESIKYPPVILGNLGNDKAKHTVLV 100 (223)
Q Consensus 21 ~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~~nl~a~~~~~~~~~~ill 100 (223)
.+.++|++|+++|++|+ .|++++++++++++++|.+++.+..+ |+++++++ +.|+|+|
T Consensus 12 ~~~~~l~~L~~~pspSG------~E~~v~~~i~~~l~~~~~e~~~D~~G--------------nvi~~~g~--~~~~v~l 69 (343)
T 3isx_A 12 HMKELIRKLTEAFGPSG------REEEVRSIILEELEGHIDGHRIDGLG--------------NLIVWKGS--GEKKVIL 69 (343)
T ss_dssp CCHHHHHHHHHSCCBTT------CCHHHHHHHHHHHTTTCSEEEECTTC--------------CEEEEECC--CSSEEEE
T ss_pred HHHHHHHHHHhCCCCCC------chHHHHHHHHHHHHHhCCEEEECCCC--------------CEEEEECC--CCCEEEE
Confidence 35689999999999999 46799999999999999988887765 89998853 4689999
Q ss_pred EeccccC
Q psy17305 101 YGHLDVQ 107 (223)
Q Consensus 101 ~~H~DtV 107 (223)
.||||||
T Consensus 70 ~aHmDev 76 (343)
T 3isx_A 70 DAHIDEI 76 (343)
T ss_dssp EEECCBC
T ss_pred Eeccccc
Confidence 9999998
No 52
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.71 E-value=3e-08 Score=87.48 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=49.6
Q ss_pred cEEEEEcCCC-C---CccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCC
Q psy17305 83 PVILGNLGND-K---AKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNV 158 (223)
Q Consensus 83 ~nl~a~~~~~-~---~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~ 158 (223)
.||++++++. + +.+.|++.+|+|||+.+ ||+.|+++|++++|++++.|.+. ++
T Consensus 204 ~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g---------------------~Ga~D~~~G~a~~le~~~~l~~~--~~ 260 (421)
T 2ek8_A 204 HNVIATKKPDANKKNTNDIIIIGSHHDSVEKA---------------------PGANDDASGVAVTLELARVMSKL--KT 260 (421)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEEEECCCCTTC---------------------CCTTTTHHHHHHHHHHHHHHTTS--CC
T ss_pred cceEEEecCcccCCCCCCEEEEecccccCCCC---------------------CCCCCCcHhHHHHHHHHHHHhcc--CC
Confidence 5999998542 2 46789999999999874 59999999999999999999874 35
Q ss_pred ceeeEEec
Q psy17305 159 PVNIKEVT 166 (223)
Q Consensus 159 ~~~i~~~~ 166 (223)
+++|.+++
T Consensus 261 ~~~i~~~~ 268 (421)
T 2ek8_A 261 DTELRFIT 268 (421)
T ss_dssp SSEEEEEE
T ss_pred CceEEEEE
Confidence 66777653
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.66 E-value=3.7e-08 Score=87.58 Aligned_cols=63 Identities=24% Similarity=0.208 Sum_probs=54.0
Q ss_pred cEEEEEcCCC-CCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCcee
Q psy17305 83 PVILGNLGND-KAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVN 161 (223)
Q Consensus 83 ~nl~a~~~~~-~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~ 161 (223)
.||++++.+. ++.+.|+|.+|+|+|+.+ +|+.|+++|++++|++++.|.+.+.+++++
T Consensus 236 ~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g---------------------~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~ 294 (444)
T 3iib_A 236 YNVIAEVKGSTKADEIVLIGAHLDSWDEG---------------------TGAIDDGAGVAIVTAAAKHILDLPQKPERT 294 (444)
T ss_dssp EEEEEEECCSTEEEEEEEEEEECCCCSSS---------------------CCTTTTHHHHHHHHHHHHHHHTSSSCCSEE
T ss_pred EEEEEEEeCCCCCCCEEEEEeecccCCCC---------------------CCCccchHHHHHHHHHHHHHHhcCCCCCCe
Confidence 5999999543 245789999999999864 499999999999999999999988788889
Q ss_pred eEEec
Q psy17305 162 IKEVT 166 (223)
Q Consensus 162 i~~~~ 166 (223)
|.+++
T Consensus 295 i~f~~ 299 (444)
T 3iib_A 295 IRVVL 299 (444)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
No 54
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.17 E-value=2.7e-06 Score=79.48 Aligned_cols=61 Identities=18% Similarity=0.150 Sum_probs=50.9
Q ss_pred cEEEEEcCCC-CCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHH---ccCCC
Q psy17305 83 PVILGNLGND-KAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQ---TKKNV 158 (223)
Q Consensus 83 ~nl~a~~~~~-~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~---~~~~~ 158 (223)
.||++++.+. .+.+.|++.+|+|+|+. |+.|+.+|++++|++++.|.+ .+.++
T Consensus 313 ~NVi~~i~G~~~~~~~vllgaH~Ds~~~-----------------------Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p 369 (707)
T 3fed_A 313 YNVVGTIRGSVEPDRYVILGGHRDSWVF-----------------------GAIDPTSGVAVLQEIARSFGKLMSKGWRP 369 (707)
T ss_dssp EEEEEEECCSSEEEEEEEEEEECCCSSS-----------------------CTTTTHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEEEEeCCCCCCceEEEeccccCCCC-----------------------CCccCcHHHHHHHHHHHHHHhhhhccCCC
Confidence 5999999653 24678999999999875 679999999999999999876 46778
Q ss_pred ceeeEEec
Q psy17305 159 PVNIKEVT 166 (223)
Q Consensus 159 ~~~i~~~~ 166 (223)
.++|.|++
T Consensus 370 ~r~I~f~~ 377 (707)
T 3fed_A 370 RRTIIFAS 377 (707)
T ss_dssp SEEEEEEE
T ss_pred CCCEEEEE
Confidence 88998764
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.08 E-value=5.2e-06 Score=76.77 Aligned_cols=61 Identities=18% Similarity=0.099 Sum_probs=50.7
Q ss_pred cEEEEEcCCC-CCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHc----cCC
Q psy17305 83 PVILGNLGND-KAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQT----KKN 157 (223)
Q Consensus 83 ~nl~a~~~~~-~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~----~~~ 157 (223)
.||++++.+. .+.+.|++.+|+|++.+ |+.|+.+|++++|++++.|.+. +.+
T Consensus 267 ~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-----------------------Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~ 323 (640)
T 3kas_A 267 LNIFGVIKGFVEPDHYVVVGAQRDAWGP-----------------------GAAKSGVGTALLLKLAQMFSDMVLKDGFQ 323 (640)
T ss_dssp EEEEEEECCSSEEEEEEEEEEECCCSSC-----------------------CTTTTHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred EEEEEEEeCCcCCCCceeeecccCCCCC-----------------------CCCcCcHHHHHHHHHHHHHHHhhhhcCCC
Confidence 5999999543 34578999999999843 8899999999999999999875 677
Q ss_pred CceeeEEec
Q psy17305 158 VPVNIKEVT 166 (223)
Q Consensus 158 ~~~~i~~~~ 166 (223)
+.++|.+++
T Consensus 324 p~r~I~f~~ 332 (640)
T 3kas_A 324 PSRSIIFAS 332 (640)
T ss_dssp CSEEEEEEE
T ss_pred CCCcEEEEE
Confidence 888988764
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=94.93 E-value=0.054 Score=47.29 Aligned_cols=56 Identities=11% Similarity=0.087 Sum_probs=42.1
Q ss_pred EEEEEc--CCCCCccEEEEEeccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCcee
Q psy17305 84 VILGNL--GNDKAKHTVLVYGHLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVN 161 (223)
Q Consensus 84 nl~a~~--~~~~~~~~ill~~H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~ 161 (223)
+.++.+ +++ ..+.|+|.+|+|+ | + ++.|+.+|++++++.++.|++. ++..+
T Consensus 167 l~y~e~~ipG~-t~~~IllsaH~cH-P-~----------------------~ANDNaSG~a~lleLar~l~~~--~~~~t 219 (435)
T 3k9t_A 167 LTYGEYYIRGE-LEEEILLTTYTCH-P-S----------------------MCNDNLSGVALITFIAKALSKL--KTKYS 219 (435)
T ss_dssp EEEEEEEECCS-SSCEEEEEEECCC-C-S----------------------CTTTTHHHHHHHHHHHHHHTTS--CCSSE
T ss_pred eEEEEEEecCC-CCCEEEEEEEcCC-C-C----------------------CCCccchHHHHHHHHHHHHhcC--CCCce
Confidence 444554 443 4589999999997 2 2 6899999999999999999864 35667
Q ss_pred eEEec
Q psy17305 162 IKEVT 166 (223)
Q Consensus 162 i~~~~ 166 (223)
++|++
T Consensus 220 ~rFvf 224 (435)
T 3k9t_A 220 YRFLF 224 (435)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77654
No 57
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=91.62 E-value=0.22 Score=44.04 Aligned_cols=17 Identities=35% Similarity=0.434 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHhcCCc
Q psy17305 46 INMIHYFADKLKQLGAT 62 (223)
Q Consensus 46 ~~~~~~l~~~l~~~G~~ 62 (223)
..+.+++.++|++.||.
T Consensus 36 ~hav~~~~~~l~~~Gf~ 52 (458)
T 1y7e_A 36 REVTAYALDKAKKLGFI 52 (458)
T ss_dssp HHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 47899999999999985
No 58
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=84.12 E-value=1.7 Score=38.25 Aligned_cols=60 Identities=17% Similarity=0.137 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCC---CCCcEEEEEc-CCCCCccEEEEEeccccC
Q psy17305 45 TINMIHYFADKLKQLGATVEICDIGNQTLPNGESI---KYPPVILGNL-GNDKAKHTVLVYGHLDVQ 107 (223)
Q Consensus 45 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~---~~~~nl~a~~-~~~~~~~~ill~~H~DtV 107 (223)
...+.+.+.+.|++.||.- ..+... +.+|..+ ....||++.. +.....+.+++.+|+|.+
T Consensus 33 ~~h~v~~~~~~l~~~Gf~~-l~e~~~--l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 33 ERMTVKEIKRILDESGFVP-LEDFAG--DPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp HHHHHHHHHHHHHTTTCEE-TTSCCS--CTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHCcCEE-cccccC--CCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 3578899999999999942 111110 1112111 0014888886 432234789999999986
No 59
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=82.85 E-value=0.35 Score=42.39 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhcCCc----EEEEecCC-CCCC-CCCCCCCCcEEEEEc-CCC--CCccEEEEEeccccC
Q psy17305 44 QTINMIHYFADKLKQLGAT----VEICDIGN-QTLP-NGESIKYPPVILGNL-GND--KAKHTVLVYGHLDVQ 107 (223)
Q Consensus 44 ~~~~~~~~l~~~l~~~G~~----~~~~~~~~-~~~~-~g~~~~~~~nl~a~~-~~~--~~~~~ill~~H~DtV 107 (223)
....+.+++.++|++.||. .+...... .++. +. ...||++.. +.+ ...+.+++.+|+|++
T Consensus 17 t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~----~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 17 TPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTR----NDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp HHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECT----TTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred CHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEEC----CCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 4678899999999999982 11111111 0110 00 014888876 432 134789999999997
No 60
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=80.87 E-value=6.6 Score=36.58 Aligned_cols=54 Identities=7% Similarity=0.166 Sum_probs=40.7
Q ss_pred HHHHHHHHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCc-EEEEec
Q psy17305 9 AEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGAT-VEICDI 68 (223)
Q Consensus 9 ~~~~~~i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~-~~~~~~ 68 (223)
+.+.+.++. +++.+.|+.|.++|..++ +++..++++|+.+.|++.|++ ++..+.
T Consensus 16 ~~~~~~~~~--~~i~~~l~~lt~~ph~aG----t~~~~~~a~yi~~~~~~~Gl~~v~~~~y 70 (707)
T 3fed_A 16 WKLVSEMKA--ENIKSFLRSFTKLPHLAG----TEQNFLLAKKIQTQWKKFGLDSAKLVHY 70 (707)
T ss_dssp HHHHHHCCH--HHHHHHHHHHSSSCCCTT----SHHHHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHhCCH--HHHHHHHHHHhcCCCcCC----CHhHHHHHHHHHHHHHHcCCCceeEEee
Confidence 344444433 678899999999876655 346889999999999999998 766554
No 61
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=78.02 E-value=21 Score=31.81 Aligned_cols=122 Identities=11% Similarity=0.034 Sum_probs=68.5
Q ss_pred HHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCC---CC------CCCCCCCCCcEEEEEcCC
Q psy17305 21 KFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQ---TL------PNGESIKYPPVILGNLGN 91 (223)
Q Consensus 21 ~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~---~~------~~g~~~~~~~nl~a~~~~ 91 (223)
+-+.+.|+|++.|..--.| ...++...+.+++.|++++..+...- .+ ..|... -|..|.-.|.+
T Consensus 205 ~~~~laRdLvn~P~N~~tP------~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~-pPrli~L~Y~g 277 (522)
T 4efd_A 205 TSTQLCQRLVDAPPNLLTT------ATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFE-APRLVTLLYTP 277 (522)
T ss_dssp HHHHHHHHHHHSCTTTSCH------HHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSS-CCEEEEEEECC
T ss_pred HHHHHHHHHhcCCchhCCH------HHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCC-CCEEEEEEECC
Confidence 4577899999988654432 36788888999999999987664320 00 012211 12344455543
Q ss_pred -CCCccEEEEEec---cccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 92 -DKAKHTVLVYGH---LDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 92 -~~~~~~ill~~H---~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
.+..++|.|.|- +||=--. --|- ..|.+ =..| ++|.++++.+++++.+.+ +|.+|..+
T Consensus 278 ~~~~~~~iaLVGKGITFDSGGls------LKp~------~~M~~-MK~D-MgGAAaVlga~~a~a~l~--lpvnV~~v 339 (522)
T 4efd_A 278 KGTPVKKVSLVGKGIVYDCGGLA------LKPA------DYMKL-MKHD-MGGAAAVFCGFLTAVRLQ--QPVQLSCT 339 (522)
T ss_dssp SSCCSEEEEEEEEEEETCCCCSS------SCHH------HHHHH-GGGT-THHHHHHHHHHHHHHHHT--CSEEEEEE
T ss_pred CCCCCCcEEEecCceEeecCCcc------CCCc------cchhh-cccc-cchHHHHHHHHHHHHHcC--CCceEEEE
Confidence 223567777773 4442110 0000 00000 0133 467778888888888876 56777644
No 62
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=77.04 E-value=6.6 Score=35.55 Aligned_cols=81 Identities=16% Similarity=0.241 Sum_probs=44.0
Q ss_pred HhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCC---CCCcEEEEEc-CC
Q psy17305 16 ESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQTLPNGESI---KYPPVILGNL-GN 91 (223)
Q Consensus 16 ~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~---~~~~nl~a~~-~~ 91 (223)
+...+.+.+.|.++++ .|+| ...+.+.++++|++.||.- ..+...-.+.+|..| .....|+|.. |.
T Consensus 3 ~~~~~~~a~~~~~Fl~-~spT--------~~HaV~~~~~~L~~aGF~~-L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~ 72 (571)
T 4eme_A 3 DKKAREYAQDALKFIQ-RSGS--------NFLACKNLKERLENNGFIN-LSEGETWNLNKNEGYVLCKENRNICGFFVGK 72 (571)
T ss_dssp HHHHHHHHHHHHHHHH-HCCS--------HHHHHHHHHHHHHHTTCEE-CCTTSCCCCCTTCEEEEEETTTEEEEEEECT
T ss_pred chHHHHHHHHHHHHHH-cCCC--------HHHHHHHHHHHHHHCcCEE-ccccCCcccCCCCEEEEEcCCCEEEEEEeCC
Confidence 3334445556666665 3443 3568899999999999942 111110011112111 0014677764 54
Q ss_pred C--CCcc-EEEEEecccc
Q psy17305 92 D--KAKH-TVLVYGHLDV 106 (223)
Q Consensus 92 ~--~~~~-~ill~~H~Dt 106 (223)
. +... --++.+|.|.
T Consensus 73 ~~~~~~G~~~IvgAHtDS 90 (571)
T 4eme_A 73 NFNIDTGSILISIGHIDS 90 (571)
T ss_dssp TCCTTTCCEEEEEEECCC
T ss_pred cCCCCCCcEEEEEEeccC
Confidence 3 2334 5688899998
No 63
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=76.13 E-value=6 Score=34.12 Aligned_cols=45 Identities=16% Similarity=0.356 Sum_probs=35.0
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEec
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDI 68 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~ 68 (223)
+++.+.++.|...+..+ .++++.++++|+.+.|+++|+.++.+++
T Consensus 16 ~~~~~~l~~Ls~~~R~~----Gs~g~~~a~~yi~~~~~~~Gl~~~~q~~ 60 (421)
T 2ek8_A 16 ENMYNTIQFLSQAPRVA----GSPEELKAVRYIEQQFKSYGYHVEVQPF 60 (421)
T ss_dssp HHHHHHHHHHTTSCCCT----TSHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCC----CCHHHHHHHHHHHHHHHHCCCceEEEEE
Confidence 57778888887654433 3557899999999999999998766654
No 64
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=75.89 E-value=1.7 Score=38.38 Aligned_cols=60 Identities=17% Similarity=0.205 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhcCCcEEEEec--CCCCCCCCCCC---CCCcEEEEEcCCCC--CccEEEEEeccccC
Q psy17305 47 NMIHYFADKLKQLGATVEICDI--GNQTLPNGESI---KYPPVILGNLGNDK--AKHTVLVYGHLDVQ 107 (223)
Q Consensus 47 ~~~~~l~~~l~~~G~~~~~~~~--~~~~~~~g~~~---~~~~nl~a~~~~~~--~~~~ill~~H~DtV 107 (223)
.+.+++.++|++.||+ +..+. ..-.+.+|..+ ...+.|++...+.. ..+.+++.+|+|++
T Consensus 39 hav~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 39 ECVTELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp STHHHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 3778999999999997 43332 11001111111 00134888763321 13459999999997
No 65
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=75.35 E-value=8 Score=33.71 Aligned_cols=45 Identities=13% Similarity=0.112 Sum_probs=32.9
Q ss_pred HHHHHHHHHhh-cc-CCCCCCCCCchHHHHHHHHHHHHHHhcCC-cEEEEec
Q psy17305 20 NKFIENLKEAV-AI-ESVSSSVQHRPQTINMIHYFADKLKQLGA-TVEICDI 68 (223)
Q Consensus 20 ~~~i~~l~~lv-~i-~s~s~~~~~~~~~~~~~~~l~~~l~~~G~-~~~~~~~ 68 (223)
++..+.++.|. .+ +..+ .++++.++++|+.+.|++.|+ .++.+++
T Consensus 21 ~~~~~~l~~l~~~~G~R~~----GS~g~~~a~~~i~~~l~~~G~~~v~~q~f 68 (444)
T 3iib_A 21 SLGYDIVESLTVEVGPRLA----GSEQDKVAVDWAIAKLQSLGFDRVYKEPV 68 (444)
T ss_dssp CHHHHHHHHHHHHTCCCCT----TSHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cHHHHHHHHHHhccCCCCC----CCHHHHHHHHHHHHHHHHcCCCceEeeeE
Confidence 45777777777 33 2222 345899999999999999999 6766554
No 66
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=73.30 E-value=13 Score=33.08 Aligned_cols=120 Identities=18% Similarity=0.226 Sum_probs=68.8
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCC---CCC------CCCCCCCCCcEEEEEc-
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGN---QTL------PNGESIKYPPVILGNL- 89 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~---~~~------~~g~~~~~~~nl~a~~- 89 (223)
.+-+.+.|+|++.|..--.| ...+++..+.++..|++++..+... ..+ ..|...| |..|+-++
T Consensus 197 a~~~~~aRdL~n~P~n~ltP------~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~p-Prli~l~y~ 269 (515)
T 3kzw_A 197 GQSINLARDFSNMPPNVLTP------QTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHK-PRLVTITYN 269 (515)
T ss_dssp HHHHHHHHHHHHSCTTTSCH------HHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSC-CEEEEEEEE
T ss_pred HHHHHHHHHHhcCCccccCH------HHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCC-CEEEEEEEC
Confidence 34567899999988655433 3677888888999999988765421 000 0122111 23444444
Q ss_pred CCCCCccEEEEEe---ccccCCCCCCCCCCCCCCceeeeCCeEEecCCC---CCchhHHHHHHHHHHHHHccCCCceeeE
Q psy17305 90 GNDKAKHTVLVYG---HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGAS---DDKGPVLGWLHAIEAFQQTKKNVPVNIK 163 (223)
Q Consensus 90 ~~~~~~~~ill~~---H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~---D~K~gv~~~l~al~~l~~~~~~~~~~i~ 163 (223)
+..+..++|.|.| =+||=--. --|- .|-. -+++|.++++.+++++.+.+ +|.+|.
T Consensus 270 g~~~~~~~i~LVGKGiTFDsGG~s------lKp~-----------~~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~ 330 (515)
T 3kzw_A 270 GKDKDEAPIALVGKGITYDSGGYS------IKTK-----------NGMATMKFDMCGAANVVGIIEAASRLQ--LPVNIV 330 (515)
T ss_dssp SSCSSCCCEEEEEEEEEEECCTTS------CCCH-----------HHHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEE
T ss_pred CCCCCCCcEEEecCceEEecCCcC------CCCc-----------cChhhchhchHHHHHHHHHHHHHHHcC--CCceEE
Confidence 3333456777776 34542110 0000 0111 23567788899999998876 466776
Q ss_pred Ee
Q psy17305 164 EV 165 (223)
Q Consensus 164 ~~ 165 (223)
.+
T Consensus 331 ~~ 332 (515)
T 3kzw_A 331 GV 332 (515)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 67
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=72.26 E-value=2.1 Score=36.37 Aligned_cols=37 Identities=16% Similarity=0.111 Sum_probs=28.8
Q ss_pred CCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 126 DEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 126 ~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
++++.|+ +.|++.|+++++++++.+++. .++.++.++
T Consensus 173 ~~~i~s~-~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ 209 (355)
T 3kl9_A 173 EKNIISK-AWDNRYGVLMVSELAEALSGQ--KLGNELYLG 209 (355)
T ss_dssp SSEEEES-CHHHHHHHHHHHHHHHHHSSC--CCSSEEEEE
T ss_pred CCEEEee-ccccHHHHHHHHHHHHHhhhc--CCCceEEEE
Confidence 4678887 799999999999999998754 355566543
No 68
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=70.61 E-value=56 Score=28.82 Aligned_cols=119 Identities=15% Similarity=0.149 Sum_probs=65.8
Q ss_pred HHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCCC--C------CCCCCCCCCcEEEEEcCCC
Q psy17305 21 KFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQT--L------PNGESIKYPPVILGNLGND 92 (223)
Q Consensus 21 ~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~--~------~~g~~~~~~~nl~a~~~~~ 92 (223)
+-+.+.|+|++.|..--.| ...+++.++.+++.|++++........ + ..|... -|..|.-+++.
T Consensus 168 ~~~~laRdLvn~P~N~~tP------~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~-pPrli~l~y~~- 239 (482)
T 3ij3_A 168 TTIYLIRDLINTPAEDMGP------SELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSR-PPLLIDLKWGD- 239 (482)
T ss_dssp HHHHHHHHHHHSCGGGSSH------HHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSS-CCEEEEEEESC-
T ss_pred HHHHHHHHHhcCCccccCH------HHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCC-CCEEEEEEeCC-
Confidence 4567899999988654432 367788888899999998876432100 0 012110 12333444432
Q ss_pred CCccEEEEEe---ccccCCCCCCCCCCCCCCceeeeCCeEEecCCC---CCchhHHHHHHHHHHHHHccCCCceeeEEec
Q psy17305 93 KAKHTVLVYG---HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGAS---DDKGPVLGWLHAIEAFQQTKKNVPVNIKEVT 166 (223)
Q Consensus 93 ~~~~~ill~~---H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~---D~K~gv~~~l~al~~l~~~~~~~~~~i~~~~ 166 (223)
+..++|.|.| =+||=--. --|- .|-. -+++|.++++.+++++.+.+ +|.+|..+.
T Consensus 240 ~~~~~i~LVGKGITFDsGGls------lKp~-----------~~M~~MK~DMgGAAaVlg~~~aia~l~--lpvnv~~ii 300 (482)
T 3ij3_A 240 IKAPKVTLVGKGVCFDSGGLD------IKTP-----------GGMLLMKKDMGGAAHALGLARMIMLQQ--LPVRLRLLI 300 (482)
T ss_dssp TTSCEEEEEECEEEEECCTTS------CCCH-----------HHHTTGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEE
T ss_pred CCCCeEEEEccceEeecCCcc------CcCc-----------cchhhccccchHHHHHHHHHHHHHHcC--CCceEEEEE
Confidence 2345566665 24441100 0000 0111 23567788889999998876 566776443
No 69
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=69.25 E-value=24 Score=31.38 Aligned_cols=120 Identities=17% Similarity=0.150 Sum_probs=70.3
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhc-CCcEEEEecCC---CCC------CCCCCCCCCcEEEEEc
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQL-GATVEICDIGN---QTL------PNGESIKYPPVILGNL 89 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~-G~~~~~~~~~~---~~~------~~g~~~~~~~nl~a~~ 89 (223)
.+-+.+.|+|++.|..--.| ...+++.++.++.. |++++..+... ..+ ..|... -|..|+-.|
T Consensus 180 a~~~~~aRdL~n~P~n~~~P------~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~-pPrli~l~y 252 (497)
T 3h8g_F 180 ATGMAFTRDLGNLPPNLCHP------SFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQ-PPRLIVLNY 252 (497)
T ss_dssp HHHHHHHHHHHHSCTTTSCH------HHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSS-CCEEEEEEE
T ss_pred HHHHHHHHHhhcCCccccCH------HHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCC-CCEEEEEEE
Confidence 45677899999988654432 36788889999998 99888765421 011 012211 123444555
Q ss_pred -CCCCCccEEEEEe---ccccCCCCCCCCCCCCCCceeeeCCeEEecCCC---CCchhHHHHHHHHHHHHHccCCCceee
Q psy17305 90 -GNDKAKHTVLVYG---HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGAS---DDKGPVLGWLHAIEAFQQTKKNVPVNI 162 (223)
Q Consensus 90 -~~~~~~~~ill~~---H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~---D~K~gv~~~l~al~~l~~~~~~~~~~i 162 (223)
+..+..++|.|.| =+||=--. --|- .|-. -+++|.++++.+++++.+.+. |.+|
T Consensus 253 ~g~~~~~~~i~LVGKGiTFDsGG~s------lKp~-----------~~M~~Mk~DM~GAAaV~g~~~a~a~l~l--~vnv 313 (497)
T 3h8g_F 253 QGGKKADKPFVLVGKGITFDTGGIS------LKPG-----------AGMDEMKYDMCGAASVFGTLRAVLELQL--PVNL 313 (497)
T ss_dssp ECSCTTSCCEEEEEEEEEEECCTTS------CCCS-----------TTGGGGGGTTHHHHHHHHHHHHHHHHTC--SSEE
T ss_pred CCCCCCCCcEEEEcCceEeccCCcc------CCCc-----------cchhhccccchHHHHHHHHHHHHHHcCC--CeEE
Confidence 4344456777777 45652110 0000 0111 235677888999999988764 5677
Q ss_pred EEe
Q psy17305 163 KEV 165 (223)
Q Consensus 163 ~~~ 165 (223)
..+
T Consensus 314 ~~~ 316 (497)
T 3h8g_F 314 VCL 316 (497)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 70
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=64.91 E-value=22 Score=31.53 Aligned_cols=123 Identities=12% Similarity=0.116 Sum_probs=68.2
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhc-CCcEEEEecCC---CCC------CCCCCCCCCcEEEEEc
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQL-GATVEICDIGN---QTL------PNGESIKYPPVILGNL 89 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~-G~~~~~~~~~~---~~~------~~g~~~~~~~nl~a~~ 89 (223)
.+-+.+.|+|++.|..--.| ...+++.++.++.. |++++..+... ..+ ..|... -|..|.-+|
T Consensus 164 a~~~~~aRdL~n~P~n~~~P------~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~-pPrli~l~y 236 (486)
T 3pei_A 164 ACGQNYAKDLQNLPANICTT------DYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYM-SNYTVCMEY 236 (486)
T ss_dssp HHHHHHHHHHHHSCTTTSCH------HHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSS-CCEEEEEEE
T ss_pred HHHHHHHHHHhcCChhhcCH------HHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCC-CCEEEEEEE
Confidence 35677899999988654432 36788888988888 89888765421 011 012211 123444445
Q ss_pred -CCCCCccEEEEEe---ccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 90 -GNDKAKHTVLVYG---HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 90 -~~~~~~~~ill~~---H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
+.++..++|.|.| =+||=--. --|- ..|. +=--+++|.++++.+++++.+.+ +|.+|..+
T Consensus 237 ~g~~~~~~~i~LVGKGiTFDsGG~s------lKp~------~~M~--~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~ 300 (486)
T 3pei_A 237 KGGNEGDAPIVLVGKGLVFDNGGIC------IKQA------AGMD--SMKMDMGGVAAVMGTMKAIAMLN--LPVNVVGV 300 (486)
T ss_dssp ECSCTTSCCEEEEEEEEETEECC--------------------------EECSHHHHHHHHHHHHHHHHT--CSSEEEEE
T ss_pred CCCCCCCCcEEEEccceEEecCCcc------cCCc------cchh--hhhccchHHHHHHHHHHHHHHcC--CCcEEEEE
Confidence 3334456777777 35552100 0000 0000 00123577888999999998876 45677644
No 71
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=61.83 E-value=84 Score=27.82 Aligned_cols=120 Identities=16% Similarity=0.147 Sum_probs=68.3
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhc-CCcEEEEecCC---CCC------CCCCCCCCCcEEEEEc
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQL-GATVEICDIGN---QTL------PNGESIKYPPVILGNL 89 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~-G~~~~~~~~~~---~~~------~~g~~~~~~~nl~a~~ 89 (223)
.+-+.+.|+|++.|..--.| ...+++.++.+++. |++++..+... ..+ ..|... -|..|.-+|
T Consensus 176 a~~~~~aRdL~n~P~n~~~P------~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~-pPrli~l~y 248 (490)
T 3jru_B 176 AEGVEFARELGNLPPNYCTP------AYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSAN-RPRLIVLKW 248 (490)
T ss_dssp HHHHHHHHHHHHSCTTTSCH------HHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSS-CCEEEEEEE
T ss_pred HHHHHHHHHhhcCCccccCH------HHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCC-CCEEEEEEE
Confidence 35677899999988654432 36778888888887 88888765421 000 012111 123444555
Q ss_pred CCCCCccEEEEEe---ccccCCCCCCCCCCCCCCceeeeCCeEEecCCC---CCchhHHHHHHHHHHHHHccCCCceeeE
Q psy17305 90 GNDKAKHTVLVYG---HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGAS---DDKGPVLGWLHAIEAFQQTKKNVPVNIK 163 (223)
Q Consensus 90 ~~~~~~~~ill~~---H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~---D~K~gv~~~l~al~~l~~~~~~~~~~i~ 163 (223)
.+.+..++|.|.| =+||=--. --|- .|-. -+++|.++++.+++++.+.+ +|.+|.
T Consensus 249 ~g~~~~~~i~LVGKGiTFDsGG~s------lKp~-----------~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~ 309 (490)
T 3jru_B 249 NGGGDARPYVLVGKGITFDTGGVN------LKTQ-----------GGIEEMKYDMCGGATVIGTFVATVKAE--LPINLV 309 (490)
T ss_dssp ETTTTSCCEEEEECEEEEECCTTS------CCCS-----------SCGGGGGGGGHHHHHHHHHHHHHHHTT--CSSEEE
T ss_pred cCCCCCCcEEEEcCeeEecCCCcc------CCCc-----------ccHhhCcccchHHHHHHHHHHHHHHcC--CCcEEE
Confidence 3222456777777 35552110 0000 0111 23567888999999998876 456776
Q ss_pred Ee
Q psy17305 164 EV 165 (223)
Q Consensus 164 ~~ 165 (223)
.+
T Consensus 310 ~~ 311 (490)
T 3jru_B 310 VV 311 (490)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 72
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=60.07 E-value=22 Score=32.63 Aligned_cols=55 Identities=13% Similarity=0.217 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCc
Q psy17305 5 AEYLAEISEYVESNKNKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGAT 62 (223)
Q Consensus 5 ~~~~~~~~~~i~~~~~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~ 62 (223)
.++.+.+.+.++. +++.+.|+.|.+.. .-++...++++.++++||.+.|+++|++
T Consensus 5 ~~l~~~l~~~i~~--~~i~~~L~~Lssd~-~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 5 DDLKRKLSEKLDS--TDFTSTIKLLNENS-YVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHHHHHHHHHHT--CCHHHHHHHTTSTT-TSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCH--HHHHHHHHHHhccc-CCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 3455666667765 46888888887742 1223334568999999999999999996
No 73
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=57.30 E-value=1e+02 Score=27.24 Aligned_cols=123 Identities=8% Similarity=0.077 Sum_probs=68.5
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCCC---CC------CCCCCCCCCcEEEEEcC
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGNQ---TL------PNGESIKYPPVILGNLG 90 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~---~~------~~g~~~~~~~nl~a~~~ 90 (223)
-+-+.+.|+|++.|..--.| ...+++..+.+++.|++++..+...- .+ ..|... -|..|.-.+.
T Consensus 167 a~~~~~aR~L~n~P~n~~tP------~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~-pPrli~l~y~ 239 (491)
T 2hc9_A 167 SESVRETARLIDTPANILTT------DALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPT-PPAFVVLSHE 239 (491)
T ss_dssp HHHHHHHHHHHHSCTTTSCH------HHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSS-CCEEEEEEEC
T ss_pred HHHHHHHHHHhcCCchhCCH------HHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCC-CCEEEEEEeC
Confidence 34567889999887654432 36788889999999999987664320 00 012211 1234444554
Q ss_pred CCCCccEEEEEe---ccccCCCCCCCCCCCCCCceeeeCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 91 NDKAKHTVLVYG---HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 91 ~~~~~~~ill~~---H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
+....++|.|.| =+||=--. --|- +.|. +=--+++|.++++.+++++.+.+ +|.+|..+
T Consensus 240 ~~~~~~~i~LVGKGiTFDsGG~s------lKp~------~~M~--~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~ 301 (491)
T 2hc9_A 240 VPGSTEHIALVGKGVVYDTGGLQ------IKTK------TGMP--NMKRDMGGAAGMLEAYSALVKHG--FSQTLHAC 301 (491)
T ss_dssp CTTCSCEEEEEEEEEEEECCTTS------CCCT------TTST--TGGGGGHHHHHHHHHHHHHHTTT--CCSEEEEE
T ss_pred CCCCCCcEEEEcCceEecCCCcc------CCCC------cChh--hccccccHHHHHHHHHHHHHHcC--CCceEEEE
Confidence 332346777776 34552110 0000 0000 11123577888899999988865 46677644
No 74
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=56.95 E-value=52 Score=29.41 Aligned_cols=121 Identities=12% Similarity=0.062 Sum_probs=68.4
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcCCcEEEEecCC---CCC------CCCCCCCCCcEEEEEc-
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLGATVEICDIGN---QTL------PNGESIKYPPVILGNL- 89 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~---~~~------~~g~~~~~~~nl~a~~- 89 (223)
-+-+.+.|+|++.|..--.| ...++...+.+++.|++++..+... ..+ ..|... -|..++-.|
T Consensus 205 a~~v~laRdLvn~P~N~ltP------~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~-pPrli~l~y~ 277 (528)
T 3kr4_A 205 YFGTYYASQLIAAPSNYCNP------VSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMY-PNKFIHLTYK 277 (528)
T ss_dssp HHHHHHHHHHHHSCTTTSCH------HHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSS-CCEEEEEEEE
T ss_pred HHHHHHHHHHhhCCccccCH------HHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCC-CCEEEEEEEc
Confidence 34677999999998755433 3567778888888999988765431 000 012211 123444555
Q ss_pred CCCCCccEEEEEe---ccccCCCCCCCCCCCCCCceeeeCCeEEecCC--CC---CchhHHHHHHHHHHHHHccCCCcee
Q psy17305 90 GNDKAKHTVLVYG---HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGA--SD---DKGPVLGWLHAIEAFQQTKKNVPVN 161 (223)
Q Consensus 90 ~~~~~~~~ill~~---H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~--~D---~K~gv~~~l~al~~l~~~~~~~~~~ 161 (223)
+..+..++|.|.| =+||=--. --| +.|. .. +.+|.++++.+++++.+.+ ..+.+
T Consensus 278 g~~~~~~~iaLVGKGITFDsGG~s------lKp-----------~~g~~M~~MK~DM~GAAaVlg~~~aia~l~-~~~vn 339 (528)
T 3kr4_A 278 SKGDVKKKIALVGKGITFDSGGYN------LKA-----------APGSMIDLMKFDMSGCAAVLGCAYCVGTLK-PENVE 339 (528)
T ss_dssp CSSCCCEEEEEEEEEEEEECCTTS------CSC-----------STTCCGGGGGGGGHHHHHHHHHHHHHHHHC-CSSEE
T ss_pred CCCCCCCcEEEecCceEeecCCcc------cCC-----------CCCcCHHHhhcCcchHHHHHHHHHHHHhcC-CCCce
Confidence 3333456788887 45653111 001 0121 12 2466777888888888776 23566
Q ss_pred eEEe
Q psy17305 162 IKEV 165 (223)
Q Consensus 162 i~~~ 165 (223)
|..+
T Consensus 340 v~~v 343 (528)
T 3kr4_A 340 IHFL 343 (528)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6533
No 75
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=56.95 E-value=1e+02 Score=27.35 Aligned_cols=120 Identities=11% Similarity=0.131 Sum_probs=68.4
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcC--CcEEEEecCC---CCC------CCCCCCCCCcEEEEE
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLG--ATVEICDIGN---QTL------PNGESIKYPPVILGN 88 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G--~~~~~~~~~~---~~~------~~g~~~~~~~nl~a~ 88 (223)
.+-+.+.|+|++.|..--.| ...+++.++.+++.| ++++..+... ..+ ..|... -|..|+-+
T Consensus 181 a~~~~laRdL~n~P~N~~tP------~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~-pPrli~l~ 253 (503)
T 1gyt_A 181 AAGIKAAKDLGNMPPNICNA------AYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQN-ESLMSVIE 253 (503)
T ss_dssp HHHHHHHHHHHHSCTTTCSH------HHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSS-CCEEEEEE
T ss_pred HHHHHHHHHHhcCChhhcCH------HHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCC-CCeEEEEE
Confidence 45667899999988654432 367788888889999 8888755321 000 012111 12344455
Q ss_pred c-CCCC-CccEEEEEe---ccccCCCCCCCCCCCCCCceeeeCCeEEecCCCC---CchhHHHHHHHHHHHHHccCCCce
Q psy17305 89 L-GNDK-AKHTVLVYG---HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGASD---DKGPVLGWLHAIEAFQQTKKNVPV 160 (223)
Q Consensus 89 ~-~~~~-~~~~ill~~---H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~D---~K~gv~~~l~al~~l~~~~~~~~~ 160 (223)
| +..+ ..++|.|.| =+||=--. --|- .|-.+ +++|.++++.+++++.+.+ +|.
T Consensus 254 Y~g~~~~~~~~i~LVGKGITFDsGGis------lKp~-----------~~M~~MK~DM~GAAaVlg~~~aia~l~--l~v 314 (503)
T 1gyt_A 254 YKGNASEDARPIVLVGKGLTFDSGGIS------IKPS-----------EGMDEMKYDMCGAAAVYGVMRMVAELQ--LPI 314 (503)
T ss_dssp EECCCCTTCCCEEEEEEEEEEECCTTS------CCCS-----------TTGGGGGGGGHHHHHHHHHHHHHHHHT--CSS
T ss_pred ECCCCCCCCCcEEEEcCceEecCCCcc------ccCC-----------cChhhcccccchHHHHHHHHHHHHHcC--CCe
Confidence 5 3322 346677777 45552100 0000 02222 3467788899999998876 456
Q ss_pred eeEEe
Q psy17305 161 NIKEV 165 (223)
Q Consensus 161 ~i~~~ 165 (223)
+|..+
T Consensus 315 nV~~~ 319 (503)
T 1gyt_A 315 NVIGV 319 (503)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77644
No 76
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=56.45 E-value=55 Score=28.94 Aligned_cols=120 Identities=14% Similarity=0.139 Sum_probs=66.8
Q ss_pred HHHHHHHHHhhccCCCCCCCCCchHHHHHHHHHHHHHHhcC--CcEEEEecCC---CCC------CCCCCCCCCcEEEEE
Q psy17305 20 NKFIENLKEAVAIESVSSSVQHRPQTINMIHYFADKLKQLG--ATVEICDIGN---QTL------PNGESIKYPPVILGN 88 (223)
Q Consensus 20 ~~~i~~l~~lv~i~s~s~~~~~~~~~~~~~~~l~~~l~~~G--~~~~~~~~~~---~~~------~~g~~~~~~~nl~a~ 88 (223)
.+-+.+.|+|++.|..--.| ...+++.++.+++.| ++++..+... ..+ ..|... -|..|+-+
T Consensus 161 a~~~~laRdLvn~P~N~~tP------~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~-pPrli~l~ 233 (484)
T 1lam_A 161 ASGQNLARRLMETPANEMTP------TKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEE-PPVFLEIH 233 (484)
T ss_dssp HHHHHHHHHHHHSCTTTSCH------HHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSS-CCEEEEEE
T ss_pred HHHHHHHHHhhCCChhhcCH------HHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCC-CCeEEEEE
Confidence 45667899999988654433 367788888899999 8888755321 000 012111 12344444
Q ss_pred c-CCC-CCccEEEEEe---ccccCCCCCCCCCCCCCCceeeeCCeEEecCCC---CCchhHHHHHHHHHHHHHccCCCce
Q psy17305 89 L-GND-KAKHTVLVYG---HLDVQPAEKEDGWNTEPFVLTLKDEKLYGRGAS---DDKGPVLGWLHAIEAFQQTKKNVPV 160 (223)
Q Consensus 89 ~-~~~-~~~~~ill~~---H~DtVp~~~~~~w~~~P~~~~~~~~~lyGrG~~---D~K~gv~~~l~al~~l~~~~~~~~~ 160 (223)
| +.. +..++|.|.| =+||=--. --|- .|-. -+++|.++++.+++++.+.+ +|.
T Consensus 234 y~g~~~~~~~~i~LVGKGITFDsGG~s------lKp~-----------~~M~~MK~DMgGAAaVlg~~~aia~l~--l~v 294 (484)
T 1lam_A 234 YKGSPNASEPPLVFVGKGITFDSGGIS------IKAA-----------ANMDLMRADMGGAATICSAIVSAAKLD--LPI 294 (484)
T ss_dssp EECSSSTTSCCEEEEECEEEEECCTTS------CCCS-----------TTGGGGGGTTHHHHHHHHHHHHHHHTT--CSS
T ss_pred ECCCCCCCCCcEEEEecceEEcCCCcC------CcCc-----------cchhhhhccchHHHHHHHHHHHHHHcC--CCe
Confidence 5 322 2234577766 34551100 0000 0111 23467788899999998876 466
Q ss_pred eeEEe
Q psy17305 161 NIKEV 165 (223)
Q Consensus 161 ~i~~~ 165 (223)
+|..+
T Consensus 295 nv~~~ 299 (484)
T 1lam_A 295 NIVGL 299 (484)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77644
No 77
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=52.91 E-value=5.8 Score=33.64 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=27.4
Q ss_pred eCCeEEecCCCCCchhHHHHHHHHHHHHHccCCCceeeEEe
Q psy17305 125 KDEKLYGRGASDDKGPVLGWLHAIEAFQQTKKNVPVNIKEV 165 (223)
Q Consensus 125 ~~~~lyGrG~~D~K~gv~~~l~al~~l~~~~~~~~~~i~~~ 165 (223)
.++++.|+ +.|++.|+++++++++.+++ ++.++.++
T Consensus 175 ~~~~i~s~-~lDnr~g~~~~l~~l~~l~~----~~~~v~~~ 210 (354)
T 2vpu_A 175 NEHRFATP-YLDDRICLYAMIEAARQLGD----HEADIYIV 210 (354)
T ss_dssp SSSEEECT-THHHHHHHHHHHHHHHHCCC----CSSEEEEE
T ss_pred CCceEEEe-cCccHHHHHHHHHHHHHhhc----CCCeEEEE
Confidence 46788886 68999999999999988754 45555443
No 78
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=46.73 E-value=58 Score=28.89 Aligned_cols=61 Identities=13% Similarity=0.145 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEecCCCCCCCCCCC--CC-CcEEEEEc-CCC--CCccEEEEEecccc
Q psy17305 45 TINMIHYFADKLKQLGATVEICDIGNQTLPNGESI--KY-PPVILGNL-GND--KAKHTVLVYGHLDV 106 (223)
Q Consensus 45 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~--~~-~~nl~a~~-~~~--~~~~~ill~~H~Dt 106 (223)
...+.+.++++|++.||.- ..+...-.+.+|..+ .. ...|+|.. ++. +...--++.+|.|.
T Consensus 52 ~~hav~~~~~~L~~aGF~~-L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDS 118 (496)
T 3vat_A 52 PFHAVAECRSRLLQAGFHE-LKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDS 118 (496)
T ss_dssp HHHHHHHHHHHHHHTTCEE-CCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHCcCeE-ccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccC
Confidence 3578899999999999942 111110011122111 00 13677764 432 22345688899998
No 79
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=37.68 E-value=16 Score=30.71 Aligned_cols=26 Identities=15% Similarity=0.156 Sum_probs=22.2
Q ss_pred CCeEEecCCCCCchhHHHHHHHHHHHH
Q psy17305 126 DEKLYGRGASDDKGPVLGWLHAIEAFQ 152 (223)
Q Consensus 126 ~~~lyGrG~~D~K~gv~~~l~al~~l~ 152 (223)
++++.|+ +.|++.|+++++++++.++
T Consensus 171 ~~~i~s~-~lDdR~g~~~~l~~l~~l~ 196 (343)
T 3isx_A 171 SGKYVSK-AMDDRIGCAVIVEVFKRIK 196 (343)
T ss_dssp TTEEEES-CHHHHHHHHHHHHHHHHCC
T ss_pred ccEEEec-cCccHHHHHHHHHHHHhcc
Confidence 4788886 6899999999999998774
No 80
>2kdu_B MUNC13-1, protein UNC-13 homolog A; calmodulin, calcium, acetylation, methylation, alternative splicing, cell junction, cell membrane, coiled coil; NMR {Xenopus laevis}
Probab=24.45 E-value=72 Score=17.47 Aligned_cols=23 Identities=26% Similarity=0.314 Sum_probs=17.9
Q ss_pred hhhHHHHHHHHHHhhhhhhHhHh
Q psy17305 197 GTKLLAAYLYEISKVTQAELEEA 219 (223)
Q Consensus 197 g~~~~a~~~~~l~~l~~~~~~~~ 219 (223)
|.++-++||..+++++..-++-.
T Consensus 1 ~s~Ak~~Wlra~nKVR~qlqe~~ 23 (36)
T 2kdu_B 1 GSRAKANWLRAFNKVRMQLQEAR 23 (36)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHccc
Confidence 45678999999999988766544
No 81
>1im3_D Cytomegalovirus protein US2; beta sheet, beta sandwhich, immunoglobulin (IG) fold, immunoglobulin (IG)-like domain, protein complex; 2.20A {Human herpesvirus 5} SCOP: b.1.18.5
Probab=20.28 E-value=38 Score=21.93 Aligned_cols=13 Identities=31% Similarity=0.680 Sum_probs=11.2
Q ss_pred eeeeCCeEEecCC
Q psy17305 122 LTLKDEKLYGRGA 134 (223)
Q Consensus 122 ~~~~~~~lyGrG~ 134 (223)
..+++|.++|||+
T Consensus 10 c~i~ng~~f~rgs 22 (95)
T 1im3_D 10 CYIDNGKLFARGS 22 (95)
T ss_dssp EEECSSEEEEEEE
T ss_pred EEEeCCeEEeece
Confidence 4578999999997
Done!