BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17307
(342 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48612|PELO_DROME Protein pelota OS=Drosophila melanogaster GN=pelo PE=2 SV=2
Length = 395
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/308 (61%), Positives = 228/308 (74%), Gaps = 50/308 (16%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
+ESEDMWHAYNLI +GDSVR++TIRKVQ+E+ TGSSTSSRVRT LTI+VESIDFDTQACV
Sbjct: 21 EESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSRVRTTLTIAVESIDFDTQACV 80
Query: 145 LRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAV 204
LRLKGRNI+ENQYVKMGAYHTLDLELNRKFEL KPEWD+IALERIE+AC+ ++ADVAAV
Sbjct: 81 LRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDTIALERIEMACDPTQSADVAAV 140
Query: 205 MMQEGLANIMLITASMSLVRTKIETNIPRKRRD------------------------NKD 240
+MQEGLA++ LITASM+LVR+KIE +IPRKR+ N D
Sbjct: 141 VMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEKGLAKFYEQVMQSILRHVNFD 200
Query: 241 LLKELL--SP---------ITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADP 289
++K +L SP +AVKMD K+LL+NKSKF+LVH+SS FKHSL+EIL DP
Sbjct: 201 VVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKFMLVHASSGFKHSLREILQDP 260
Query: 290 TVTSKMQDTKA---------------LDPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
V +KM DTKA +P++AFYG +HV A ESQAI+TLLI+D LFR
Sbjct: 261 AVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHVLQAAESQAIETLLISDNLFRC 320
Query: 335 SDLNERKK 342
D++ RK+
Sbjct: 321 QDVSLRKE 328
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS 60
MKL+ K + DK G V LVPEESEDMWHAYNLIA+GDSVR++TIRKVQ+E+ TGSSTSS
Sbjct: 1 MKLLGKYV-DKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSS 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLK 85
RVRT LTI+VESIDFDTQACVLRLK
Sbjct: 60 RVRTTLTIAVESIDFDTQACVLRLK 84
>sp|Q5XIP1|PELO_RAT Protein pelota homolog OS=Rattus norvegicus GN=Pelo PE=2 SV=1
Length = 385
Score = 318 bits (814), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 204/308 (66%), Gaps = 50/308 (16%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
+E EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+RVRT LT+ VE+IDFD+QAC
Sbjct: 21 EEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQACQ 80
Query: 145 LRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAV 204
LR+KG NIQEN+YVKMGAYHT++LE NR+F L+K +WDS+ LERIE AC+ +ADVAAV
Sbjct: 81 LRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAV 140
Query: 205 MMQEGLANIMLITASMSLVRTKIETNIPRKRRDN-------------------------- 238
+MQEGLA++ L+T SM+L R K+E NIPRKR+ N
Sbjct: 141 VMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHINFE 200
Query: 239 ---------KDLLKELLSPITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADP 289
++E +AVK DNKVLLEN+SKFL VH+SS K+SLKE+L DP
Sbjct: 201 VVKCILVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGHKYSLKEVLCDP 260
Query: 290 TVTSKMQDTKAL---------------DPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
TV S++ DTKA +P RAFYG + V ANE+ AIDTLLI+D LFR+
Sbjct: 261 TVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVERANEALAIDTLLISDELFRH 320
Query: 335 SDLNERKK 342
D+ R +
Sbjct: 321 QDVATRSR 328
>sp|Q5RCE3|PELO_PONAB Protein pelota homolog OS=Pongo abelii GN=PELO PE=2 SV=1
Length = 385
Score = 318 bits (814), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/308 (53%), Positives = 205/308 (66%), Gaps = 50/308 (16%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
+E EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+RVRT LT+ VE+IDFD+QAC
Sbjct: 21 EEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQACQ 80
Query: 145 LRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAV 204
LR+KG NIQEN+YVKMGAYHT++LE NR+F L+K +WDS+ LERIE AC+ +ADVAAV
Sbjct: 81 LRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAV 140
Query: 205 MMQEGLANIMLITASMSLVRTKIETNIPRKRRDN-------------------------- 238
+MQEGLA+I L+T SM+L R K+E NIPRKR+ N
Sbjct: 141 VMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHIHFD 200
Query: 239 ---------KDLLKELLSPITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADP 289
++E +AVK DNK+LLEN+SKFL VH+SS K+SLKE+L DP
Sbjct: 201 VVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHASSGHKYSLKEVLCDP 260
Query: 290 TVTSKMQDT------KALD---------PSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
TV S++ DT KALD P RAFYG + V ANE+ AIDTLLI+D LFR+
Sbjct: 261 TVASRLSDTKAAGEVKALDDFYKMLQHGPDRAFYGLKQVEKANEAMAIDTLLISDELFRH 320
Query: 335 SDLNERKK 342
D+ R +
Sbjct: 321 QDVATRSR 328
>sp|Q58DV0|PELO_BOVIN Protein pelota homolog OS=Bos taurus GN=PELO PE=2 SV=2
Length = 385
Score = 317 bits (813), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 203/308 (65%), Gaps = 50/308 (16%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
+E EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+RVRT LT+ VE+IDFD+QAC
Sbjct: 21 EEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQACQ 80
Query: 145 LRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAV 204
LR+KG NIQEN+YVKMGAYHT++LE NR+F L+K +WDS+ LERIE AC+ +ADVAAV
Sbjct: 81 LRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAV 140
Query: 205 MMQEGLANIMLITASMSLVRTKIETNIPRKRRDN-------------------------- 238
+MQEGLA+I L+T SM+L R K+E NIPRKR+ N
Sbjct: 141 VMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHIHFD 200
Query: 239 ---------KDLLKELLSPITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADP 289
++E +AVK DNKVLLEN+SKFL VH+SS K+SLKE L DP
Sbjct: 201 VVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGHKYSLKEALCDP 260
Query: 290 TVTSKMQDTKAL---------------DPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
TV S++ DTKA +P RAFYG + V ANE+ AIDTLLI+D LFR+
Sbjct: 261 TVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVEKANEAMAIDTLLISDELFRH 320
Query: 335 SDLNERKK 342
D+ R +
Sbjct: 321 QDVATRSR 328
>sp|Q9BRX2|PELO_HUMAN Protein pelota homolog OS=Homo sapiens GN=PELO PE=1 SV=2
Length = 385
Score = 316 bits (809), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/308 (54%), Positives = 208/308 (67%), Gaps = 50/308 (16%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
+E EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+RVRT LT+ VE+IDFD+QAC
Sbjct: 21 EEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQACQ 80
Query: 145 LRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAV 204
LR+KG NIQEN+YVKMGAYHT++LE NR+F L+K +WDS+ LERIE AC+ +ADVAAV
Sbjct: 81 LRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAV 140
Query: 205 MMQEGLANIMLITASMSLVRTKIETNIPRKRRDNK------------------------D 240
+MQEGLA+I L+T SM+L R K+E NIPRKR+ N D
Sbjct: 141 VMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHIHFD 200
Query: 241 LLKELL--SPITTVE---------AVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADP 289
++K +L SP E AVK DNK+LLEN+SKFL VH+SS K+SLKE L DP
Sbjct: 201 VVKCILVASPGFVREQFCDYLFQQAVKTDNKLLLENRSKFLQVHASSGHKYSLKEALCDP 260
Query: 290 TVTSKMQDTKAL---------------DPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
TV S++ DTKA +P RAFYG + V ANE+ AIDTLLI+D LFR+
Sbjct: 261 TVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVEKANEAMAIDTLLISDELFRH 320
Query: 335 SDLNERKK 342
D+ R +
Sbjct: 321 QDVATRSR 328
>sp|Q7ZWC4|PELO_DANRE Protein pelota homolog OS=Danio rerio GN=pelo PE=2 SV=1
Length = 385
Score = 316 bits (809), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 212/307 (69%), Gaps = 50/307 (16%)
Query: 86 ESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACVL 145
E+EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS SSRVRT LT+ VE+IDFD+QAC L
Sbjct: 22 EAEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSSRVRTTLTLCVETIDFDSQACQL 81
Query: 146 RLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVM 205
R+KG NIQENQYVKMGAYHT++LELNRKF L+K WDS+ L+RIE AC+ + ADVAAV+
Sbjct: 82 RVKGTNIQENQYVKMGAYHTIELELNRKFTLAKKVWDSVVLDRIEQACDPAQKADVAAVV 141
Query: 206 MQEGLANIMLITASMSLVRTKIETNIPRKRRD------------------------NKDL 241
MQEGLAN++L+T +M+L+R K+E IPRKR+ N D+
Sbjct: 142 MQEGLANLVLVTPAMTLLRAKVEVTIPRKRKGSCTQHDKALERFYEAVMQGILRHFNFDV 201
Query: 242 LKELL--SP-------ITTV--EAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADPT 290
+K +L SP I+ + EAV+ D K+LLEN+SKF++VHSSS K+SLKE+L DP
Sbjct: 202 VKCILVASPGFVKDQFISYLFKEAVRQDCKLLLENRSKFMVVHSSSGHKYSLKEVLCDPA 261
Query: 291 VTSKMQDTKAL---------------DPSRAFYGYRHVSAANESQAIDTLLIADCLFRNS 335
VT+++ DTKA +P RAFYG HV A+E+ AID LLI+D LFR+
Sbjct: 262 VTARLSDTKAAGEVKALEDFYKMLQQEPDRAFYGLAHVERASEALAIDILLISDTLFRHQ 321
Query: 336 DLNERKK 342
D+ R +
Sbjct: 322 DVATRGR 328
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS 60
MKLVHK+I +KD +G V L+P+E+EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS SS
Sbjct: 1 MKLVHKDI-EKDNAGQVTLIPDEAEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSS 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLK 85
RVRT LT+ VE+IDFD+QAC LR+K
Sbjct: 60 RVRTTLTLCVETIDFDSQACQLRVK 84
>sp|Q5ZK01|PELO_CHICK Protein pelota homolog OS=Gallus gallus GN=PELO PE=2 SV=1
Length = 385
Score = 315 bits (808), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 202/308 (65%), Gaps = 50/308 (16%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
+E EDMWH YNL+ GDS+RASTIRKVQ+ES+TGS S+R+RT LT+ VE+IDFD+QAC
Sbjct: 21 EEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSNRIRTTLTLCVEAIDFDSQACQ 80
Query: 145 LRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAV 204
LR+KG NIQEN+YVKMGAYHT++LE NR+F L+K +WDS+ LERIE AC+ ADVAAV
Sbjct: 81 LRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWNADVAAV 140
Query: 205 MMQEGLANIMLITASMSLVRTKIETNIPRKRRDN-------------------------- 238
+MQEGLA++ L+T SM+L R K+E NIPRKR+ N
Sbjct: 141 VMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHINFE 200
Query: 239 ---------KDLLKELLSPITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADP 289
++E +AVK DNK+LLEN+SKFL VHSSS K+ LKE L DP
Sbjct: 201 VVKCVLVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKFLQVHSSSGHKYVLKEALCDP 260
Query: 290 TVTSKMQDTKAL---------------DPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
VTS++ DTKA +P RAFYG +HV ANE+ AIDTLLI+D LFR+
Sbjct: 261 AVTSRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKHVEKANEAMAIDTLLISDELFRH 320
Query: 335 SDLNERKK 342
D+ R +
Sbjct: 321 QDVATRAR 328
>sp|Q80X73|PELO_MOUSE Protein pelota homolog OS=Mus musculus GN=Pelo PE=2 SV=3
Length = 385
Score = 314 bits (805), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/308 (52%), Positives = 203/308 (65%), Gaps = 50/308 (16%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
+E EDMWH +NL+ GDS+RASTIRKVQ+ES+TGS S+RVRT LT+ VE+IDFD+QAC
Sbjct: 21 EEPEDMWHTFNLVQVGDSLRASTIRKVQTESSTGSVGSNRVRTTLTLCVEAIDFDSQACQ 80
Query: 145 LRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAV 204
LR+KG NIQEN+YVKMGAYHT++LE NR+F L+K +WDS+ LERIE AC+ +ADVAAV
Sbjct: 81 LRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSVVLERIEQACDPAWSADVAAV 140
Query: 205 MMQEGLANIMLITASMSLVRTKIETNIPRKRRDN-------------------------- 238
+MQEGLA++ L+T SM+L R K+E NIPRKR+ N
Sbjct: 141 VMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDRALERFYEQVVQAIQRHINFE 200
Query: 239 ---------KDLLKELLSPITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADP 289
++E +AVK DNKVLLEN+SKFL VH+SS K+SLKE L DP
Sbjct: 201 VVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKFLQVHASSGHKYSLKEALCDP 260
Query: 290 TVTSKMQDTKAL---------------DPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
TV S++ DTKA +P RAFYG + V ANE+ AIDTLLI+D LFR+
Sbjct: 261 TVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVERANEALAIDTLLISDELFRH 320
Query: 335 SDLNERKK 342
D+ R +
Sbjct: 321 QDVATRSR 328
>sp|Q5U567|PELO_XENLA Protein pelota homolog OS=Xenopus laevis GN=pelo PE=2 SV=1
Length = 383
Score = 313 bits (802), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/308 (52%), Positives = 203/308 (65%), Gaps = 50/308 (16%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
+E+EDMWH YNL+ GDS++ASTIRKVQ+ES+TGS S+RVRT LTI VE+IDFD+QAC
Sbjct: 21 EEAEDMWHTYNLLHVGDSLQASTIRKVQTESSTGSVGSNRVRTTLTICVETIDFDSQACQ 80
Query: 145 LRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAV 204
LR+KG NIQENQYVKMGAYHT++LE NRKF L+K +WDSI LERIE AC+ +ADVAAV
Sbjct: 81 LRVKGINIQENQYVKMGAYHTIELEPNRKFTLAKKQWDSIVLERIEQACDPAFSADVAAV 140
Query: 205 MMQEGLANIMLITASMSLVRTKIETNIPRKRRDN-------------------------- 238
+MQEGLA+I L+T SM+L+R KIET+IPRKRR N
Sbjct: 141 VMQEGLAHICLVTPSMTLLRAKIETSIPRKRRGNCTQHEKALEKFYEQVMQGILRHINFD 200
Query: 239 ---------KDLLKELLSPITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADP 289
++E + AVK D K+LLEN+ KFL VHSSS K+SL E+L DP
Sbjct: 201 VVKVVLVASPGFVREQFCEFLFLRAVKQDLKILLENRGKFLQVHSSSGRKYSLTEVLCDP 260
Query: 290 TVTSKMQDTKAL---------------DPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
VT+++ DTKA +P RAFYG + V ANE+ A+DTLL+ D LFR+
Sbjct: 261 AVTARLSDTKAACEIKALGDFYKMLQHEPDRAFYGIKQVEKANEALAVDTLLVTDELFRH 320
Query: 335 SDLNERKK 342
D+ R +
Sbjct: 321 QDVPTRTR 328
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS 60
MKL+ K+I +KD +G V L+PEE+EDMWH YNL+ GDS++ASTIRKVQ+ES+TGS S+
Sbjct: 1 MKLIRKDI-EKDNAGQVTLIPEEAEDMWHTYNLLHVGDSLQASTIRKVQTESSTGSVGSN 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLK 85
RVRT LTI VE+IDFD+QAC LR+K
Sbjct: 60 RVRTTLTICVETIDFDSQACQLRVK 84
>sp|P50444|YNU6_CAEEL Uncharacterized protein R74.6 OS=Caenorhabditis elegans GN=R74.6
PE=3 SV=1
Length = 381
Score = 246 bits (629), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/316 (47%), Positives = 196/316 (62%), Gaps = 50/316 (15%)
Query: 77 TQACVLRLKESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESI 136
T VL +E+EDMWH YNLI GD ++ASTIRKV SE++TG+++S RV TMLT+SVESI
Sbjct: 13 TGFVVLMAEEAEDMWHIYNLIRIGDIIKASTIRKVVSETSTGTTSSQRVHTMLTVSVESI 72
Query: 137 DFDTQACVLRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIE 196
DFD A L LKGRNI+EN VK+GAYHT+DLE NRKF L K EWDSI LER+ +A +
Sbjct: 73 DFDPGAQELHLKGRNIEENDIVKLGAYHTIDLEPNRKFTLQKTEWDSIDLERLNLALDPA 132
Query: 197 KTADVAAVMMQEGLANIMLITASMSLVRTKIETNIPRKRR----DNKDLLKELLSPITT- 251
+ ADVAAV++ EGLAN+ LIT +M+L R KI+ IPRKR+ ++ L++ ++T
Sbjct: 133 QAADVAAVVLHEGLANVCLITPAMTLTRAKIDMTIPRKRKGFTSQHEKGLEKFYEAVSTA 192
Query: 252 ------VEAVKM------------------------DNKVLLENKSKFLLVHSSSAFKHS 281
++ VK K E ++KF+L HSSS FKH+
Sbjct: 193 FMRHVNLQVVKCVIVASRGFVKDAFMQHLIAHADANGKKFTTEQRAKFMLTHSSSGFKHA 252
Query: 282 LKEILADPTVTSKMQDTKA---------------LDPSRAFYGYRHVSAANESQAIDTLL 326
LKE+L P V ++ DTKA +P RAFYG+ HV+ AN+ AI+TLL
Sbjct: 253 LKEVLETPQVALRLADTKAQGEVKALNQFLELMSTEPDRAFYGFNHVNRANQELAIETLL 312
Query: 327 IADCLFRNSDLNERKK 342
+AD LFR D+ R+K
Sbjct: 313 VADSLFRAQDIETRRK 328
>sp|Q9USL5|DOM34_SCHPO Protein dom34 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=dom34 PE=1 SV=1
Length = 390
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 181/308 (58%), Gaps = 50/308 (16%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
+E EDMWH YN++ GD ++AST+R+V TGS++ SRV L I VE++DFDT+A
Sbjct: 21 EEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGSRVVMKLRILVENMDFDTKAAQ 80
Query: 145 LRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAV 204
L +KGR + + VKMG+YHTLDLEL+R F L K EWD+ AL+R++ ACN + A++ AV
Sbjct: 81 LHIKGRTTEYHPEVKMGSYHTLDLELHRNFTLYKNEWDAFALDRVDAACNPSRNAEIGAV 140
Query: 205 MMQEGLANIMLITASMSLVRTKIETNIPRKRRDNKDLLKE-------------------- 244
++ EGLANI LIT M+++R +I+ IPRKRR + ++
Sbjct: 141 VLDEGLANICLITDYMTILRQRIDQVIPRKRRGDSSAYQKGLDKFYDSVFQSINSEFDFD 200
Query: 245 ------LLSPITTVE---------AVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADP 289
L SP AVK+D K ++++K+KF+++HSS+ HSL EIL DP
Sbjct: 201 KLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVKSKNKFVILHSSTGHIHSLNEILKDP 260
Query: 290 TVTSKMQDTKAL---------------DPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
V SK+ DTK + D +A+YG HV A E AI LLI+D LFR+
Sbjct: 261 AVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYGPNHVLKAFELGAIGELLISDSLFRS 320
Query: 335 SDLNERKK 342
SD+ RKK
Sbjct: 321 SDIATRKK 328
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS 60
MKL+ KNI +K+ SG + + PEE EDMWH YN++ GD ++AST+R+V TGS++ S
Sbjct: 1 MKLIQKNI-EKNGSGWITMCPEEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGS 59
Query: 61 RVRTMLTISVESIDFDTQACVLRLKESEDMWH 92
RV L I VE++DFDT+A L +K +H
Sbjct: 60 RVVMKLRILVENMDFDTKAAQLHIKGRTTEYH 91
>sp|P33309|DOM34_YEAST Protein DOM34 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DOM34 PE=1 SV=2
Length = 386
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 154/335 (45%), Gaps = 62/335 (18%)
Query: 65 MLTISVESIDFDTQACVLRL--KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTS 122
M IS++ F+ V+ L ++ ED++ Y ++ + D + +K S+ +
Sbjct: 1 MKVISLKKDSFNKGGAVITLLPEDKEDLFTVYQIVDKDDELIFK--KKFTSKLDEAGKKK 58
Query: 123 SRVRTMLTISVESIDFDTQACVLRLKGRNIQE-----NQYVKMGAYHTLDLELNRKFELS 177
S L I V S DFD + L+ KG + + N + +G Y + L+ F +
Sbjct: 59 STDLVKLKIKVISEDFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTII 118
Query: 178 KPEWDSIALERIEVACNIEKTADVAAVMMQEGLANIMLITASMSLVRTKIETNIPRKRRD 237
K ++ + + ACNIE +D AAV++QEG+A++ L+T+S ++++ KIE ++P+K+R
Sbjct: 119 KQNFNKFMQKLLNEACNIEYKSDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRT 178
Query: 238 -------------------------NKDLLKELL--SPITTVEAVKMD----------NK 260
N D LK ++ SP + MD NK
Sbjct: 179 TDVLKFDEKTEKFYKAIYSAMKKDLNFDKLKTIILCSP-GFYAKILMDKIFQYAEEEHNK 237
Query: 261 VLLENKSKFLLVHSSSAFKHSLKEILADPTVTSKMQDTKA---------------LDPSR 305
+L+NK F + H S+ + + E+L +P SK+QDTK D +
Sbjct: 238 KILDNKGMFFIAHCSTGYLQGINEVLKNPLYASKLQDTKYSKEIMVMDEFLLHLNKDDDK 297
Query: 306 AFYGYRHVSAANESQAIDTLLIADCLFRNSDLNER 340
A+YG + V A E AI LL+ D + + ++ +R
Sbjct: 298 AWYGEKEVVKAAEYGAISYLLLTDKVLHSDNIAQR 332
>sp|A0B6U3|PELO_METTP Protein pelota homolog OS=Methanosaeta thermophila (strain DSM 6194
/ PT) GN=pelA PE=3 SV=2
Length = 347
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 42/286 (14%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDFDTQACVLR 146
+D+WH +L++ GD V A+T RK+ ++ + RT+ L ISVE+++F T + LR
Sbjct: 23 DDLWHLKHLVSPGDLVFATTQRKISGATDKLRPEKAERRTVRLGISVEAVEFHTYSNWLR 82
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G I+ V +G+YHTL++E + + K W L+RIE A V ++
Sbjct: 83 IHG-VIKSG--VDIGSYHTLNIEAGSELSIIK-RWRPDELQRIEEAVAESNRPRVVLALV 138
Query: 207 QEGLANIMLI----TASMSLVRTKIETNIPRKRRDNKDLLKELLSPITTVEA-------- 254
+EG A I ++ +++ +R RD D LKE+ I
Sbjct: 139 EEGEATIGVLRQFGVQTVAEIRGGSGKGSGSSVRD--DFLKEVADQIANSAGDDAYVVLA 196
Query: 255 ----VKMDNKVLLENKSKFLLVH-----SSSAFKHSLKEILADPTV-----TSKM-QDTK 299
K D + ++E + LL +SS + +E+L TV S++ ++T+
Sbjct: 197 GPGFTKEDLRKVMEARYPDLLKRLTMDDASSTGRSGFQEVLRRGTVDRIVEASRISRETR 256
Query: 300 ALD--------PSRAFYGYRHVSAANESQAIDTLLIADCLFRNSDL 337
+D RA YG R V A AI+TL+I D L R D+
Sbjct: 257 LMDDLMKEIATDGRAAYGIREVREAANYGAIETLMIVDQLVRRGDV 302
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS 60
M+++ +N+ + G ++LV E +D+WH +L++ GD V A+T RK+ ++ +
Sbjct: 1 MRVIKRNL--RGDEGEISLVAESLDDLWHLKHLVSPGDLVFATTQRKISGATDKLRPEKA 58
Query: 61 RVRTM-LTISVESIDFDTQACVLRL 84
RT+ L ISVE+++F T + LR+
Sbjct: 59 ERRTVRLGISVEAVEFHTYSNWLRI 83
>sp|O27679|PELO_METTH Protein pelota homolog OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pelA PE=3 SV=2
Length = 353
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 119/293 (40%), Gaps = 45/293 (15%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRT--MLTISVESIDFDTQACVL 145
+D+WH ++I EGD + A T R++Q S + V+ L I VE++ F L
Sbjct: 21 DDLWHLSHIIEEGDLLSARTTRRIQDTSGEKIRSDRGVKKTFYLGIRVETVSFHIYTGRL 80
Query: 146 RLKG---RNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVA 202
R G R ++ V MG++HTL+++LN + K W L+R+ +A K
Sbjct: 81 RATGVIERGPED--LVPMGSHHTLEVKLNTPLRIQKEHWSRWTLKRLRMAVRASKNLKAI 138
Query: 203 AVMMQEGLANIMLITASMSLVRTKIETNIPRKR---RDNKDLLKELLSPITTVEAVKMDN 259
++M++ +A + LI R I +IP KR RD L +E I D
Sbjct: 139 ILVMEDDVAELGLIRQYGVEYRGPITGHIPGKRIQQRDRGKLRREFYESIVESLQKYGDL 198
Query: 260 KVLL--------------------ENKSKFLLVHSSSAFKHSLKEILADPTV-------- 291
+ ++ E K +L ++ + + + E+L TV
Sbjct: 199 ETIIIAGPGFYKSDFYDYLMERYPEIAKKAVLENTGTGGRAGISEVLRKGTVERVSSEKR 258
Query: 292 -------TSKMQDTKALDPSRAFYGYRHVSAANESQAIDTLLIADCLFRNSDL 337
++ + A DP YG V A A++ LL+ D + D+
Sbjct: 259 IASEIRNVNEFLEKLARDPDSVVYGKVEVMDAINMGAVEKLLVLDRVVSREDI 311
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRT--M 65
+ + +K+GV+ LVPE +D+WH ++I EGD + A T R++Q S + V+
Sbjct: 4 VEEDEKNGVIELVPETLDDLWHLSHIIEEGDLLSARTTRRIQDTSGEKIRSDRGVKKTFY 63
Query: 66 LTISVESIDFDTQACVLR 83
L I VE++ F LR
Sbjct: 64 LGIRVETVSFHIYTGRLR 81
>sp|B6YUV3|PELO_THEON Protein pelota homolog OS=Thermococcus onnurineus (strain NA1)
GN=pelA PE=3 SV=1
Length = 357
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRV-RTMLTISVESIDFDTQACVLR 146
+D+WH Y++I EGD V A T+RK S++ + V L + E I+F A +R
Sbjct: 21 DDLWHLYHIIDEGDVVYAKTLRKQSQRSDSLRAEKVEVIPVFLGVRAEKINFHKFANQVR 80
Query: 147 LKGRNIQENQY-VKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVM 205
+ G + ++ V +G YHT+ +E + KP W +ER+ A + K A V V+
Sbjct: 81 VTGPIVYASREDVPLGKYHTIAIEEGTVVTIQKPRWKEHHIERLREAVSASKRARVMIVV 140
Query: 206 MQEGLANIMLITASMSLVRTKIETNIPRKR-------------RDNKDLLKELLSPITTV 252
+ +G A++ L+ + T I N+ KR D ++E+++
Sbjct: 141 IDDGEADMALVREYGVEILTSIRHNLGGKRYNTDREAEEKRFFHDVAKTMEEIMNREKVE 200
Query: 253 EAVKMDNKVLLENKSKFL------------LVHSSSAFKHSLKEILADPTV--------- 291
+A+ + E+ KFL + +S + + E++ TV
Sbjct: 201 KAIVAGPGFVKEDFYKFLRENYPELVKKVVIEDTSVTGRTGIYEVIKRGTVDRVYHENRV 260
Query: 292 ------TSKMQDTKALDPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
K+ + A + YG R V A A++TLL+ D L +
Sbjct: 261 AKEVQLIEKVLENIAKNNGLVAYGLREVEEAANYGAVETLLVLDELLKG 309
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS 60
M+++H++ K G V + E +D+WH Y++I EGD V A T+RK S++ +
Sbjct: 1 MQIIHED----PKEGKVKVKAETLDDLWHLYHIIDEGDVVYAKTLRKQSQRSDSLRAEKV 56
Query: 61 RV-RTMLTISVESIDFDTQACVLRL 84
V L + E I+F A +R+
Sbjct: 57 EVIPVFLGVRAEKINFHKFANQVRV 81
>sp|C5A5T8|PELO_THEGJ Protein pelota homolog OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=pelA PE=3 SV=1
Length = 357
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 124/289 (42%), Gaps = 42/289 (14%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRV-RTMLTISVESIDFDTQACVLR 146
+D+WH Y++I GD V A T+RK S++ + V L + E I+F A +R
Sbjct: 21 DDLWHLYHVIDPGDVVYAKTLRKQAQRSDSLRAEKVEVIPVYLGVKAEKINFHKFANQVR 80
Query: 147 LKGRNIQENQY-VKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVM 205
+ G + ++ V +G YHT+ +E + KP W +ER++ A K A V V+
Sbjct: 81 VTGPIVYASRDDVPLGKYHTITIEEGTVVTIQKPRWKEHHIERLKEAIEASKRAKVMIVV 140
Query: 206 MQEGLANIMLITASMSLVRTKIETNIPRKR----------RDNKDLLK---ELL------ 246
+ EG A+I L+ + I N+ KR R DL K EL+
Sbjct: 141 IDEGEADIALVREYGVEMVASIRRNLGGKRYNTDRESEEKRFFHDLAKTMAELMEREKIE 200
Query: 247 -SPITTVEAVKMD-NKVLLEN----KSKFLLVHSSSAFKHSLKEILADPTV--------- 291
+ + VK D +K L EN K ++ +S + + E++ TV
Sbjct: 201 KAIVAGPGFVKEDFHKFLRENYPELAKKVVIEDTSVTGRTGIYEVIKRGTVDRVYHENRV 260
Query: 292 ------TSKMQDTKALDPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
K+ + A + A YG R V A A++TLL+ D L +
Sbjct: 261 AKEVQLVEKVLEHVARNTGLATYGLREVEEAVNYGAVETLLVLDELLKG 309
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRV-RTML 66
+ +K K G+V + E +D+WH Y++I GD V A T+RK S++ + V L
Sbjct: 4 LEEKPKEGIVKVKAETLDDLWHLYHVIDPGDVVYAKTLRKQAQRSDSLRAEKVEVIPVYL 63
Query: 67 TISVESIDFDTQACVLRL 84
+ E I+F A +R+
Sbjct: 64 GVKAEKINFHKFANQVRV 81
>sp|A2BL82|PELO_HYPBU Protein pelota homolog OS=Hyperthermus butylicus (strain DSM 5456 /
JCM 9403) GN=pelA PE=3 SV=1
Length = 360
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Query: 76 DTQACVLRL--KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISV 133
DT+ ++R+ + ++D+W +I GD VRA T+R++ + GS SSR+ +LT+ V
Sbjct: 7 DTKRGLVRVVPETTDDIWLLSTVIQPGDLVRAKTLREIHF-GDRGSGRSSRIPMVLTVRV 65
Query: 134 ESIDFDTQACVLRLKGRNIQ-ENQYVKMGAYHTLDLELNRKFELSKPE-WDSIALERIE 190
E+++F LR++G I+ +Y +G YHTL +E R+ ++ KP W + +E+++
Sbjct: 66 EAVEFQAFTTRLRIRGIVIEGPEKYGVVGKYHTLSIEPGRELDIVKPSGWPQVLIEKLK 124
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 13 KSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVES 72
K G+V +VPE ++D+W +I GD VRA T+R++ + GS SSR+ +LT+ VE+
Sbjct: 9 KRGLVRVVPETTDDIWLLSTVIQPGDLVRAKTLREIHF-GDRGSGRSSRIPMVLTVRVEA 67
Query: 73 IDFDTQACVLRLK 85
++F LR++
Sbjct: 68 VEFQAFTTRLRIR 80
>sp|Q57638|PELO_METJA Protein pelota homolog OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pelA PE=3 SV=1
Length = 347
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 37/286 (12%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDFDTQACVLR 146
+D+W YN+I EGD + A T R+VQ + + + R M L I V++++FD +R
Sbjct: 21 DDLWVLYNIIEEGDKIFAVTERRVQDKGDVIRADRGAKRKMFLGIEVKNVEFDENTKRVR 80
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G I V +G++HT++++ + + K W +ERI+ A K V V+M
Sbjct: 81 ILGTIIHGPDDVPLGSHHTIEIKPFDELSIEK-NWKKWQIERIKEAIESSKRPKVLVVVM 139
Query: 207 QEGLANIMLI--TASMSLVRTKIETNIPRKRRDNKDLLKELLSPITTV------------ 252
+ A+I + + + K T+ + N++L KE I V
Sbjct: 140 DDEEADIFEVRDYSIKEICSIKSHTSKKLDYKINEELKKEYYHEIAKVLSEYDVDNILVA 199
Query: 253 ---------------EAVKMDNKVLLENKSKFLLVHSSSAFKHSL-KEILADPTVTSKMQ 296
+ ++ NK+++E+ S + K + I A+ V + Q
Sbjct: 200 GPGFAKNSFYNFISSQYPELKNKIVVESISTTSRAGLNEVIKRGIINRIYAESRVAKETQ 259
Query: 297 DTKAL-----DPSRAFYGYRHVSAANESQAIDTLLIADCLFRNSDL 337
+ L A YG V A E AIDTLL++D L RN ++
Sbjct: 260 LIEKLLEEIAKKGLAVYGIDEVKKALEYSAIDTLLVSDSLVRNHEI 305
>sp|O59148|PELO_PYRHO Protein pelota homolog OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=pelA
PE=3 SV=1
Length = 356
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRV-RTMLTISVESIDFDTQACVLR 146
+D+WH Y++IT GD V A T+RK S++ V L + VE I+F A LR
Sbjct: 21 DDLWHLYHIITPGDVVYAKTLRKQSQRSDSLRPEKVEVIPVFLGVKVEKINFHKFANQLR 80
Query: 147 LKGRNIQENQY-VKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVM 205
+ G I ++ V +G YHT+ +E L K W +ER++ A K A V V
Sbjct: 81 VTGPIIYASREDVPLGKYHTIAVEPGTIITLQKERWKPYYIERLKEAVEASKRAKVMIVT 140
Query: 206 MQEGLANIMLI 216
+++G A + ++
Sbjct: 141 IEDGEAEMAIV 151
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRV-RTML 66
+ +K K G V + E +D+WH Y++I GD V A T+RK S++ V L
Sbjct: 4 LEEKPKEGKVKIKVETLDDLWHLYHIITPGDVVYAKTLRKQSQRSDSLRPEKVEVIPVFL 63
Query: 67 TISVESIDFDTQACVLRL 84
+ VE I+F A LR+
Sbjct: 64 GVKVEKINFHKFANQLRV 81
>sp|Q8PVZ0|PELO_METMA Protein pelota homolog OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=pelA
PE=3 SV=1
Length = 350
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 36/281 (12%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH +I +GD V A T RK S S+ +V+ L I VE ++F A LR
Sbjct: 23 DDLWHLKYIIEKGDMVFALTRRKADSASDKLRPEKVEKVKVRLGIRVEELEFHKFANRLR 82
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G I+ + G+YHTL++E+ + K W + L+RI+ A K V V +
Sbjct: 83 IHG-PIEHG--MDTGSYHTLNVEIGTNISIIKEHWKNDQLQRIQDAEEAGKRPKVVIVAV 139
Query: 207 QEGLANIMLITASMSLVRTKI-ETNIPRKRRDNKDLLKELLSPI---------------- 249
+EG A+I + V + I +++ R+ + +E++ +
Sbjct: 140 EEGDADIGFVRHYGIEVYSHIRQSSGKRETGLRNEFFREIVEQLRHAVPEDASIVIAGPG 199
Query: 250 -TTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADPTVTSKMQDTKALDPS---- 304
T + +K N+ E SK L +S +E+L V MQ+++ S
Sbjct: 200 FTKEDFLKYFNETESEMASKALTEDTSMIGMSGFQEVLRRGAVDRIMQESRIARESSLME 259
Query: 305 ----------RAFYGYRHVSAANESQAIDTLLIADCLFRNS 335
+A YG+ V A A++TLLIAD R
Sbjct: 260 DLIREISMDGKAAYGFADVKNALGYGAVETLLIADETLREG 300
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 11 KDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNT-GSSTSSRVRTMLTIS 69
K + G +A+ E +D+WH +I +GD V A T RK S S+ +V+ L I
Sbjct: 9 KGREGEIAVTAETLDDLWHLKYIIEKGDMVFALTRRKADSASDKLRPEKVEKVKVRLGIR 68
Query: 70 VESIDFDTQACVLRL 84
VE ++F A LR+
Sbjct: 69 VEELEFHKFANRLRI 83
>sp|Q9V0V3|PELO_PYRAB Protein pelota homolog OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pelA PE=3 SV=1
Length = 356
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 126/297 (42%), Gaps = 43/297 (14%)
Query: 82 LRLKESEDMWHAYNLITEGDSVRASTIRK-VQSESNTGSSTSSRVRTMLTISVESIDFDT 140
L+++ +D+WH Y++I+ GD V A T+RK Q + + L + E I+
Sbjct: 15 LKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFLGVRAEKINLHR 74
Query: 141 QACVLRLKGRNIQENQY-VKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTA 199
A LR+ G + ++ V +G YHT+ +E + K W S +ERI+ A K A
Sbjct: 75 FANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEAVEASKRA 134
Query: 200 DVAAVMMQEGLANIMLITASMSLVRTKIETNIPRKRRDNK--DLLKELLSPI--TTVEAV 255
V V M++G A + ++ I NI KR + K D K+ + T + +
Sbjct: 135 KVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYNVKREDEEKKFFHDVAKTIKDLI 194
Query: 256 KMDN--KVLL-------ENKSKFL------------LVHSSSAFKHSLKEILADPTVTSK 294
+ +N KV++ EN FL L +S + + E++ TV
Sbjct: 195 ERENVQKVIVAGPGFYKENFYGFLRENYPELAGKVVLDDTSMGGRVGVYEVIKRGTVDKV 254
Query: 295 MQDTK---------------ALDPSRAFYGYRHVSAANESQAIDTLLIADCLFRNSD 336
+T+ A D A YG + V A A+DTLL+ D L + D
Sbjct: 255 YTETRVAQEIKLVEKVIERIAKDEPVA-YGLKDVEEAVNYGAVDTLLVLDELLKGDD 310
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRK-VQSESNTGSSTSSRVRTML 66
+ +K K G V L E +D+WH Y++I+ GD V A T+RK Q + + L
Sbjct: 4 LEEKPKEGKVKLKVETLDDLWHLYHVISPGDIVYAKTLRKQAQRSDSLRPEKVEAIPVFL 63
Query: 67 TISVESIDFDTQACVLRL 84
+ E I+ A LR+
Sbjct: 64 GVRAEKINLHRFANQLRV 81
>sp|Q8TSZ1|PELO_METAC Protein pelota homolog OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=pelA PE=3 SV=1
Length = 350
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 40/283 (14%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH +I +GD V A T RK S S+ +V+ L I VE ++F A LR
Sbjct: 23 DDLWHLKYIIEKGDLVFALTKRKADSASDKLRPEKVEKVKVRLGIRVEEMEFHKFANRLR 82
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G I+ + +G+YHTL++E+ + K W + L+RI+ A K V V +
Sbjct: 83 IHG-PIEHG--MDVGSYHTLNVEIGTNISIIKERWKNDQLQRIQDAEEAGKRPKVVIVAV 139
Query: 207 QEGLANIMLITASMSLVRTKI-ETNIPRKRRDNKDLLKELLSPITTVEAVKMDNKVLL-- 263
+EG A+I + V + I +++ R+ + +E++ + AV D +++
Sbjct: 140 EEGDADIGFVRHYGIEVYSHIRQSSGKRENGLRSEFFREIVDQLR--HAVPEDASIVIAG 197
Query: 264 -----------------ENKSKFLLVHSSSAFKHSLKEILADPTVTSKMQDTKALDPS-- 304
E SK L +S +E+L V MQ+++ S
Sbjct: 198 PGFTKEDFLKYFHETEPEMASKALTEDTSMIGMSGFQEVLRRGAVDRIMQESRIARESSL 257
Query: 305 ------------RAFYGYRHVSAANESQAIDTLLIADCLFRNS 335
+A YG+ V A + A++TLLIAD R
Sbjct: 258 MEDLLREISMDGKAAYGFADVKNALKYGAVETLLIADETLREG 300
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 11 KDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNT-GSSTSSRVRTMLTIS 69
+ + G +A+ E +D+WH +I +GD V A T RK S S+ +V+ L I
Sbjct: 9 RGREGEIAITAETLDDLWHLKYIIEKGDLVFALTKRKADSASDKLRPEKVEKVKVRLGIR 68
Query: 70 VESIDFDTQACVLRL 84
VE ++F A LR+
Sbjct: 69 VEEMEFHKFANRLRI 83
>sp|Q8U150|PELO_PYRFU Protein pelota homolog OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=pelA PE=3 SV=1
Length = 356
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 88 EDMWHAYNLITEGDSVRASTIRK-VQSESNTGSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH Y++I+EGD V A T+RK Q + V L I E I+ A LR
Sbjct: 21 DDLWHLYHIISEGDVVYAKTLRKQAQRSDSLRPEKVEAVPVFLGIKAEKINLHRFANQLR 80
Query: 147 LKGRNIQENQY-VKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVM 205
+ G I ++ V +G YHTL +E + K +W + +ER++ A K A V V
Sbjct: 81 ITGPIIYASREDVPLGRYHTLTVEPGTVITIQKEKWKNYHIERLKEAIESSKKARVMIVA 140
Query: 206 MQEGLANIMLITASMSLVRTKIETNIPRKRRDNK 239
+++G A I ++ I NI KR + K
Sbjct: 141 IEDGEAEIAIVREYGLDFVGSITYNISGKRYNIK 174
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRK-VQSESNTGSSTSSRVRTML 66
+ +K K G + + E +D+WH Y++I+EGD V A T+RK Q + V L
Sbjct: 4 LEEKPKEGKIKIKAETLDDLWHLYHIISEGDVVYAKTLRKQAQRSDSLRPEKVEAVPVFL 63
Query: 67 TISVESIDFDTQACVLRL 84
I E I+ A LR+
Sbjct: 64 GIKAEKINLHRFANQLRI 81
>sp|Q8TZ98|PELO_METKA Protein pelota homolog OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=pelA PE=3 SV=1
Length = 353
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 43/286 (15%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSE--SNTGSSTSSRVRTMLTISVESIDFDTQACVL 145
+D+WH Y+++ +GD V A R+V+ E R L + VE ++FD A L
Sbjct: 21 DDLWHLYHVVRKGDLVFALERRRVKDERAETIRRDKGERKPVYLGVRVEDVEFDKYANRL 80
Query: 146 RLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVM 205
R+KG I+ + G++HT+++ ++ ++ K EW+ LERIE A + AV
Sbjct: 81 RIKG-VIEHGP--ESGSHHTVNVTTGKRIKIVKDEWERKDLERIEEAEMSRPPVMLVAVD 137
Query: 206 MQEGLANIMLITASMSLVRTKIETNIPRKRRDNK--DLLK---------ELLSPITTVEA 254
EG I+ + +V ++ N+P KR ++ ++ K E ++ VE
Sbjct: 138 TGEGTIGIVR-DYGLDVV-ARVRHNVPGKRGGDRRAEMRKFFHRLADEIERIAEEEGVEH 195
Query: 255 VKMDNKVLLENK-SKFL---------LVHSSSAFKHSLKEILADPTVTSKMQDTKALDPS 304
+ + +++ ++FL + + SA + L E++ V +++++ +
Sbjct: 196 IVVGGPGFVKSDFAEFLREERDIPAHVEDTGSAGEAGLIEMIRRGAVERAVEESRVAEEV 255
Query: 305 RAF---------------YGYRHVSAANESQAIDTLLIADCLFRNS 335
+ YG R A E AID LL+AD FR +
Sbjct: 256 KHLEEVFKRIGKGDDKVAYGVRECLKAAEFGAIDVLLVADEKFREA 301
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSE--SNTGSST 58
MK+V K+++ G + ++PE +D+WH Y+++ +GD V A R+V+ E
Sbjct: 1 MKVVEKDLD----KGYIEVLPETLDDLWHLYHVVRKGDLVFALERRRVKDERAETIRRDK 56
Query: 59 SSRVRTMLTISVESIDFDTQACVLRLK 85
R L + VE ++FD A LR+K
Sbjct: 57 GERKPVYLGVRVEDVEFDKYANRLRIK 83
>sp|Q5JIB9|PELO_PYRKO Protein pelota homolog OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pelA PE=3 SV=1
Length = 357
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 88 EDMWHAYNLITEGDSVRASTIRK-VQSESNTGSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH Y++I GD V A T+RK Q + + + L + E I+F A +R
Sbjct: 21 DDLWHLYHIIDPGDIVYAKTLRKQAQRADSLRAEKVEVIPVFLGVQAEKINFHKFANQVR 80
Query: 147 LKGRNIQENQY-VKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVM 205
+ G + ++ V +G YHT+ +E + KP W +ER++ A K A V V+
Sbjct: 81 VTGPIVYASREDVPLGKYHTIAIEQGTVVTIQKPRWKEHHIERLKEAVAASKRARVMIVV 140
Query: 206 MQEGLANIMLITASMSLVRTKIETNIPRKR 235
+ +G A++ L+ + I N+ KR
Sbjct: 141 IDDGEADMALVREYGVEILNSIRHNLGGKR 170
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 8 INDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRK-VQSESNTGSSTSSRVRTML 66
+ +K K G V + E +D+WH Y++I GD V A T+RK Q + + + L
Sbjct: 4 LEEKPKEGKVKVKAETLDDLWHLYHIIDPGDIVYAKTLRKQAQRADSLRAEKVEVIPVFL 63
Query: 67 TISVESIDFDTQACVLRL 84
+ E I+F A +R+
Sbjct: 64 GVQAEKINFHKFANQVRV 81
>sp|A6UUY1|PELO_META3 Protein pelota homolog OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=pelA PE=3 SV=1
Length = 348
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 36/281 (12%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH N+I + ++V A T R+ + + + + ++ R L + E I FD LR
Sbjct: 21 DDLWHLSNIILKNNAVSAMTERRTEDKGDKLRADRGTKRRVYLGVKAEKIKFDENTNRLR 80
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G I + V +G+YHT+D+E + + K W L+R++ A N K + V+M
Sbjct: 81 VSGPIIHGPEDVPIGSYHTIDIEPLKDVSIQK-NWKKWDLQRLKDAENSAKKPKIIVVIM 139
Query: 207 QEGLANIMLI----TASMSLVRTKIETNIPRKRRDNKDL-----LKELLSP------ITT 251
+ A + +I + +++++ + KR+D +++ + E++SP +
Sbjct: 140 DDSDATVFIIRDYGVKEIGHIKSRLSKKLDYKRQDQENINYYNEILEVMSPYEGKILVAG 199
Query: 252 VEAVKMDNKVLLENKSKFLLVH-----SSSAFKHSLKEILADPTVTSKMQDTKALDPSR- 305
K + + L K K +L ++ + L E+L V + + ++
Sbjct: 200 PGFTKNNFQKYLSEKHKDMLQRVVFESTNHTGRLGLAEVLKSGIVDRIYGEARLSKETQL 259
Query: 306 -------------AFYGYRHVSAANESQAIDTLLIADCLFR 333
A YG V A AI+TLLI D R
Sbjct: 260 VNKLLEEISKKGLAVYGVDDVKNALNYSAIETLLITDEFLR 300
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNT-GSSTS 59
MK++ K I +K+ ++ ++PE +D+WH N+I + ++V A T R+ + + + +
Sbjct: 1 MKII-KEIPEKN---IIKVMPENLDDLWHLSNIILKNNAVSAMTERRTEDKGDKLRADRG 56
Query: 60 SRVRTMLTISVESIDFDTQACVLRL 84
++ R L + E I FD LR+
Sbjct: 57 TKRRVYLGVKAEKIKFDENTNRLRV 81
>sp|Q3INN9|PELO_NATPD Protein pelota homolog OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=pelA PE=3 SV=1
Length = 355
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 33/284 (11%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDFDTQACVLR 146
+D+WH ++ GD V T R++Q + + T M + I V +++F A LR
Sbjct: 24 DDLWHLTYVLEPGDLVAGDTTRRIQRDDDKMRDTGGEREPMWIRIDVNNVEFAKFANRLR 83
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G + ++ ++G +HT ++E + + + K W LER+E A + DVA +
Sbjct: 84 VGGDIVDCSREDQLGFHHTFNVEEHDELTVEKV-WQVDQLERLEEAVEAAEQPDVAIATV 142
Query: 207 QEGLANIMLITASMSLVRTKIETNIPRKR--RDNKDLLKELLSPITTVEA---------- 254
+EG A+I + R I + R +L +EL + + ++A
Sbjct: 143 EEGQAHIHTVAQYGVEERASITGTTGKGEYARSRDELFEELAAILRRLDAEAIILAGPGF 202
Query: 255 VKMDNKVLLENKS-----KFLLVHSSSAFKHSLKEILADPTVTSKMQDTKA--------- 300
K D +E+ + K +V ++S + E+L V +T+
Sbjct: 203 TKQDALEHIEDNAPEAAEKIQVVDTASVGDRGVHEVLKRGAVDRIQTETRVSKEAELIDE 262
Query: 301 -----LDPSRAFYGYRHVSAANESQAIDTLLIADCLFRNSDLNE 339
+ +A YG V+ A E AI+TLLI D R E
Sbjct: 263 LMERIGEGEKAAYGVDEVAEAAEFGAIETLLILDERLREERAGE 306
Score = 38.9 bits (89), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 17 VALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDF 75
+ LVPE +D+WH ++ GD V T R++Q + + T M + I V +++F
Sbjct: 16 ITLVPETLDDLWHLTYVLEPGDLVAGDTTRRIQRDDDKMRDTGGEREPMWIRIDVNNVEF 75
Query: 76 DTQACVLRL 84
A LR+
Sbjct: 76 AKFANRLRV 84
>sp|Q0W6H4|PELO_UNCMA Protein pelota homolog OS=Uncultured methanogenic archaeon RC-I
GN=pelA PE=3 SV=1
Length = 357
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 43/286 (15%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDFDTQACVLR 146
+D+WH ++ GD+V A T R V S S+ + + L I VES +F + LR
Sbjct: 23 DDLWHLKYIVEPGDTVFAMTFRAVDSVSDKIRPDKVEKKLVRLGIKVESTEFHKFSNRLR 82
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+KG I + + GAYHTL++E + ++K W S +ERI A K +V V +
Sbjct: 83 IKGTIISD---LDAGAYHTLNIEPYSELSIAK-HWKSDQIERIRDAVEASKRPEVEIVTI 138
Query: 207 QEGLANIMLI----TASMSLVR----TKIETNIPRKRRDNKDLLKELLSPITTVEAVK-- 256
+EG A I + +S +R K E R + E+ + + + V+
Sbjct: 139 EEGEAAIGYLRQYGIEEVSRIRQASSGKREGADARSVDGRGEFFGEVAAQLKYADKVQTI 198
Query: 257 --MDNKVLLENKSKFLLVH----------------SSSAFKHSLK-----EILADPTVTS 293
+ ++ KFL V+ SS F+ L+ + + +T
Sbjct: 199 VVAGPGFIKDDFVKFLRVNHPAVAQKVIVEDTSSIGSSGFQEVLRRGAIQRVAEENRITR 258
Query: 294 KMQDTKAL-----DPSRAFYGYRHVSAANESQAIDTLLIADCLFRN 334
+ Q +AL +A YG+ A + A++TLLIAD R
Sbjct: 259 EAQLIEALLSEIAKDGKATYGFAETKRAVDYGAVETLLIADETLRG 304
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 15 GVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESI 73
G ++L PE +D+WH ++ GD+V A T R V S S+ + + L I VES
Sbjct: 13 GEISLQPESLDDLWHLKYIVEPGDTVFAMTFRAVDSVSDKIRPDKVEKKLVRLGIKVEST 72
Query: 74 DFDTQACVLRLK 85
+F + LR+K
Sbjct: 73 EFHKFSNRLRIK 84
>sp|Q46C69|PELO_METBF Protein pelota homolog OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pelA PE=3 SV=1
Length = 350
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESN-TGSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH +I +GD V + T RK S S+ +V+ L I V+ ++F A LR
Sbjct: 23 DDLWHLKYIIEKGDLVFSVTKRKADSASDKIRPEKVEKVKVRLGIRVDDLEFHKFANRLR 82
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
L G + + +G+YHTL++E+ + K W + L+RI+ A K V V +
Sbjct: 83 LHG---MIERGMDVGSYHTLNIEIGTNLSVIKEHWKNDQLQRIKDAEEASKRPKVVMVAI 139
Query: 207 QEGLANIMLITASMSLVRTKI-ETNIPRKRRDNKDLLKELLSPI---------------- 249
+EG A+I + + + I +++ R+ + +E++ +
Sbjct: 140 EEGDADIGFVHHYGIEIYSHIRQSSGKRETGLRNEFFREVVEQLRHAVPEEASIVIAGPG 199
Query: 250 -TTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADPTVTSKMQDTKALDPS---- 304
T + +K + SK L+ +S +E+L V MQ+++ S
Sbjct: 200 FTKEDFIKYFQETEPAMASKALIEDTSMIGMSGFQEVLRRGAVDRIMQESRIARESALME 259
Query: 305 ----------RAFYGYRHVSAANESQAIDTLLIADCLFRNS 335
+A YG V A A++TLL+AD R
Sbjct: 260 DLIREISMDGKAAYGLGDVKNALNFGAVETLLVADETLREG 300
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 11 KDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESN-TGSSTSSRVRTMLTIS 69
K + G +A+ E +D+WH +I +GD V + T RK S S+ +V+ L I
Sbjct: 9 KGREGEIAVTAETLDDLWHLKYIIEKGDLVFSVTKRKADSASDKIRPEKVEKVKVRLGIR 68
Query: 70 VESIDFDTQACVLRL 84
V+ ++F A LRL
Sbjct: 69 VDDLEFHKFANRLRL 83
>sp|A3DMX7|PELO_STAMF Protein pelota homolog OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=pelA PE=3 SV=1
Length = 356
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 85 KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 144
++ +D+W YN+I D V A+T R ++ + +S+S R+ LTI V++++F
Sbjct: 18 EDQDDLWALYNIIKPLDRVTATTSRDIK---HGETSSSRRIPMTLTIEVKTLEFQPFTER 74
Query: 145 LRLKGRNIQ-ENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAA 203
LR++G ++ +Y G YHTL++E + + K +W LE I + ++ +A
Sbjct: 75 LRIRGIVVEGPERYGVKGHYHTLNIEPGKPLIIWKEKWSENELEIISRFTSRKQKVLLAT 134
Query: 204 VMMQEGLANIMLITASMSLVRTKIETNIPRKRRD--NKDLLKELLSPIT-----TVEAVK 256
E A I L+T + + +NIP KR + L++ LS I + +
Sbjct: 135 FDYDE--AAIALLTEQGIRLLEEFTSNIPGKREPVLFQKGLEKYLSSIAEKILDYINKFQ 192
Query: 257 MD--------------NKVLLENKSKFLLVHSSSAFKHS-LKEILADPTVTSKMQDTKAL 301
+D +++ E K ++ + S S ++E+L +V +++T +
Sbjct: 193 VDIVVIASPGDLQKRVARIIKEKKPVNIITDTVSIGGQSGIRELLRRDSVREAVKETNII 252
Query: 302 ---------------DPSRAFYGYRHVSAANESQAIDTLLIADCLFRNSDLNERKK 342
+P YG V A + A+D LL+++ L R D R++
Sbjct: 253 KAQRILDEFHKNLSKNPDMVAYGIDDVEYAVKYNAVDKLLVSEELLRIYDEEVRRR 308
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS 60
MK++ K++ + G + ++PE+ +D+W YN+I D V A+T R ++ + +S+S
Sbjct: 1 MKILEKDL----RKGYLKILPEDQDDLWALYNIIKPLDRVTATTSRDIK---HGETSSSR 53
Query: 61 RVRTMLTISVESIDFDTQACVLRLK 85
R+ LTI V++++F LR++
Sbjct: 54 RIPMTLTIEVKTLEFQPFTERLRIR 78
>sp|A5UKW7|PELO_METS3 Protein pelota homolog OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=pelA PE=3 SV=1
Length = 353
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 20/145 (13%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTG----SSTSSRVRTMLTISVESIDFDTQAC 143
+D+WH +++ GDSV + T R++Q NTG S + L I VE+I F
Sbjct: 21 DDLWHLSHIVEVGDSVSSKTTRRIQD--NTGDKLRSDRGVKKTFTLRIDVENITFHIFTG 78
Query: 144 VLRLKGRNIQENQ-YVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVA 202
LRL G + + + +G++HT++++LN + K +W + AL+R+ A IE + +A
Sbjct: 79 KLRLTGVITKGPEDLIPLGSHHTVEVKLNTPITIKKEKWANWALKRLNQA--IEASKKLA 136
Query: 203 AVMMQEGLANIMLI---TASMSLVR 224
A+ I+L+ TA++ L+R
Sbjct: 137 AI--------IVLLEDDTATLGLMR 153
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTG----S 56
MK+V ++ K G+V LVPE +D+WH +++ GDSV + T R++Q NTG S
Sbjct: 1 MKIVKQD----KKEGIVTLVPETLDDLWHLSHIVEVGDSVSSKTTRRIQ--DNTGDKLRS 54
Query: 57 STSSRVRTMLTISVESIDFDTQACVLRL 84
+ L I VE+I F LRL
Sbjct: 55 DRGVKKTFTLRIDVENITFHIFTGKLRL 82
>sp|A7I7Y6|PELO_METB6 Protein pelota homolog OS=Methanoregula boonei (strain 6A8) GN=pelA
PE=3 SV=1
Length = 341
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 35/278 (12%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDFDTQACVLR 146
+D+WH +L++ GD V A+T R V+ ++ R + L + VE ++F LR
Sbjct: 23 DDLWHLQHLVSPGDLVFATTFRSVEGATDKIRPEKVEKRPVRLGVRVEKVEFSHHGVRLR 82
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G I E+ + GAYHT+++E + + + W + LER++ A + + +
Sbjct: 83 ISG--IIEHG-MDTGAYHTINVETGYEISVIR-RWRPVDLERLDRAVKASVYGVIHILTL 138
Query: 207 QEGLANIMLI--TASMSLVRTKIETNIPRKRRDNKDLLKELLSPITTVEA---------V 255
+EG A + + S++ + + ++ I V V
Sbjct: 139 EEGEAELFRLRQYGPESVITITAGSGKGGETETRTGFFDTVIKSIAEVSGPMVIAGPGFV 198
Query: 256 KMDNKVLLENK-----SKFLLVHSSSAFKHSLKEILADPTVTS-----------KMQDTK 299
K D +NK + ++ + + ++++++ T+ ++ D
Sbjct: 199 KEDFVRYAKNKNCAPAGRAIVAETRRIGRGAVQDVIGAGTLEKLIGDLQLSREVRLMDEV 258
Query: 300 ALDPSR---AFYGYRHVSAANESQAIDTLLIADCLFRN 334
L SR YGY+ V+ A E A+D +L+AD L R+
Sbjct: 259 LLRISRDGAIAYGYKDVATAIEYGAVDEVLLADSLLRD 296
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 11 KDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTIS 69
KD G + L PE +D+WH +L++ GD V A+T R V+ ++ R + L +
Sbjct: 9 KDNYGEIRLFPESIDDLWHLQHLVSPGDLVFATTFRSVEGATDKIRPEKVEKRPVRLGVR 68
Query: 70 VESIDFDTQACVLRL 84
VE ++F LR+
Sbjct: 69 VEKVEFSHHGVRLRI 83
>sp|Q2FQH4|PELO_METHJ Protein pelota homolog OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=pelA PE=3 SV=1
Length = 341
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 5/128 (3%)
Query: 87 SEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDFDTQACVL 145
S+D+WH +NLIT G V A+T+R V+ + R + L I VE ++F + L
Sbjct: 22 SDDLWHLHNLITPGSLVYATTLRSVEGSQDKIRPEKQEKRPVRLGIRVEDVEFHEYSIRL 81
Query: 146 RLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVM 205
R+ G I+ V +G++HTL+LE + + K W LERI+ A + + +
Sbjct: 82 RVFG-TIESG--VDIGSHHTLNLEPGYEISVIK-SWSGSDLERIDRAIKGSTSEAIHILT 137
Query: 206 MQEGLANI 213
++EG A +
Sbjct: 138 VEEGEAEL 145
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 15 GVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESI 73
G + L PE S+D+WH +NLI G V A+T+R V+ + R + L I VE +
Sbjct: 13 GEIRLFPENSDDLWHLHNLITPGSLVYATTLRSVEGSQDKIRPEKQEKRPVRLGIRVEDV 72
Query: 74 DFDTQACVLRL 84
+F + LR+
Sbjct: 73 EFHEYSIRLRV 83
>sp|Q5V3G6|PELO_HALMA Protein pelota homolog OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=pelA PE=3 SV=1
Length = 355
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 115/281 (40%), Gaps = 39/281 (13%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQ-SESNTGSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH +I GD V T R++Q ++ N R + I V ++F A LR
Sbjct: 24 DDLWHLSYVIEPGDLVSGDTTRRIQRNDDNLRDKGGEREPMWIQIEVTDVEFAKFANRLR 83
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELS---KPEWDSIALERIEVACNIEKTADVAA 203
+ G + ++ ++G +HTL++E + + + KP+ +R+E A + DVA
Sbjct: 84 VGGEIVDCSREDQLGFHHTLNVEEHTELTVEKHLKPD----QADRLEEAVEATENPDVAI 139
Query: 204 VMMQEGLANIMLITASMSLVRTKIETNIPRKR--RDNKDLLKELLS-------------- 247
++EG A++ + + R I + + R K+L EL S
Sbjct: 140 ATVEEGEAHVHTVAQYGTEERATITSTTGKGEYARPRKELFDELASVLKRQDVDAYILAG 199
Query: 248 -PITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADPTVTSKMQDTKALD---- 302
T +A+ + + + +V +S+ + E+L V Q T+ +
Sbjct: 200 PGFTKQDALDHFQDEIPDIAEQITVVDTSAVGDRGVHEVLKRGAVEDVQQQTRIAEEADY 259
Query: 303 ----------PSRAFYGYRHVSAANESQAIDTLLIADCLFR 333
S YG V+ A + AI+TLL+ D R
Sbjct: 260 IDELMARIGSGSEVAYGPEEVAKAADYGAIETLLVLDERLR 300
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 17 VALVPEESEDMWHAYNLIAEGDSVRASTIRKVQ-SESNTGSSTSSRVRTMLTISVESIDF 75
+ +VPE +D+WH +I GD V T R++Q ++ N R + I V ++F
Sbjct: 16 IEVVPETLDDLWHLSYVIEPGDLVSGDTTRRIQRNDDNLRDKGGEREPMWIQIEVTDVEF 75
Query: 76 DTQACVLRL 84
A LR+
Sbjct: 76 AKFANRLRV 84
>sp|Q6M133|PELO_METMP Protein pelota homolog OS=Methanococcus maripaludis (strain S2 /
LL) GN=pelA PE=3 SV=1
Length = 348
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH ++I +++ A T R+ + + + + ++ R L I E I+F LR
Sbjct: 21 DDLWHLSHIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKINFHEDFNRLR 80
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G+ I + +G+YHT+D+E + + K W +ER++ A + K V V+M
Sbjct: 81 VSGKIIHAPDDIPIGSYHTIDIEPFLQVSVQK-NWKKWDIERLKEAEDSSKKPKVVVVIM 139
Query: 207 QEGLANIMLI 216
+ A+I L+
Sbjct: 140 DDSEADIFLV 149
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 16 VVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNT-GSSTSSRVRTMLTISVESID 74
++ L+PE +D+WH ++I +++ A T R+ + + + + ++ R L I E I+
Sbjct: 12 IIKLIPENLDDLWHLSHIIQPYNAIYAVTERRTEDKGDKLRADRGTKRRVFLGIKAEKIN 71
Query: 75 FDTQACVLRLKESEDMWHAYNLITEGD--SVRASTIRKVQSESN----------TGSSTS 122
F RL+ S + HA + I G ++ +V + N +S
Sbjct: 72 FHEDFN--RLRVSGKIIHAPDDIPIGSYHTIDIEPFLQVSVQKNWKKWDIERLKEAEDSS 129
Query: 123 SRVRTMLTISVESIDFDTQACVLRLKGRNIQENQYVKMGAYHTLDLELNRKFELS 177
+ + ++ I +D D++A + ++ I+E +K G LD + N + + S
Sbjct: 130 KKPKVVVVI----MD-DSEADIFLVREFGIKELASIKSGVSKKLDYKQNEQAKFS 179
>sp|Q2NFD9|PELO_METST Protein pelota homolog OS=Methanosphaera stadtmanae (strain DSM
3091) GN=pelA PE=3 SV=1
Length = 351
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 130/298 (43%), Gaps = 56/298 (18%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRV---RTMLTISVESIDFDTQACV 144
+D+WH +++ D V T R++Q ++N+G + + R + L I VE I+F +
Sbjct: 21 DDLWHLSHIVEVNDYVSTLTARRIQ-DNNSGKTRADRGVKKKFFLGIRVEKINFHKYTGM 79
Query: 145 LRLKGRNIQEN---QYVKMGAYHTLDLELNRKFELSKPEWDSIALERI-----------E 190
LR G I E+ + +G++HT++++LN + K W+ +LER+ E
Sbjct: 80 LRFTG--IIESGPEDLIPLGSHHTINVQLNNSIRIKKI-WNKWSLERLNQAIEASNRANE 136
Query: 191 VACNIEKTADVAAVMMQEGLANIMLITASMSLVRTKIETNIPRKRRDN-KDLLKEL---- 245
+ IE ++ Q G+ I I +S + IE N +K + +D+ K L
Sbjct: 137 IIVAIEDNTTELGIIKQYGIDYIGPIIGDIS-GKQNIEKNRAQKVNEYYEDITKTLTQQK 195
Query: 246 -------LSPITTVEAVKMDNKVLLENKSKF---LLVHSSSAFKHS-LKEILADPTVTSK 294
+ P T L EN K +++ S+ A H+ ++E+L + + S
Sbjct: 196 DIDKLIIIGPGFTKNGYY---NYLEENYPKLAKKVILESTGAGGHAGIQEVLKNGLIESL 252
Query: 295 MQDTK---------------ALDPSRAFYGYRHVSAANESQAIDTLLIADCLFRNSDL 337
+D K + YG + V A+ A++ LL+ + L R+ ++
Sbjct: 253 SKDAKIAKEAALVNKLLEQIGKSSNTVTYGKKQVITASNMGAVEKLLVLEDLVRDKNI 310
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 9 NDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRV---RTM 65
N K G++ +VPE +D+WH +++ D V T R++Q ++N+G + + R +
Sbjct: 5 NQDKKQGLIEVVPETIDDLWHLSHIVEVNDYVSTLTARRIQ-DNNSGKTRADRGVKKKFF 63
Query: 66 LTISVESIDFDTQACVLRL 84
L I VE I+F +LR
Sbjct: 64 LGIRVEKINFHKYTGMLRF 82
>sp|Q18J81|PELO_HALWD Protein pelota homolog OS=Haloquadratum walsbyi (strain DSM 16790)
GN=pelA PE=3 SV=1
Length = 355
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 43/283 (15%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQ-SESNTGSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH +++ GD V T R++Q ++ N + R ++TI V ++F A LR
Sbjct: 24 DDLWHLSHVLEPGDRVGGDTTRRIQRNDENLRDTGGQREHLVVTIEVADVEFARFANRLR 83
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G I ++ ++G YHTL++E + + ++K ++ +RIE A + ADVA +
Sbjct: 84 VGGEIISCSREDELGHYHTLNVESHDEIIVTK-KFAPDQRKRIEAAEEAAENADVAVATI 142
Query: 207 QEGLANIMLITA-------SMSLVRTKIETNIPRKRRDNKDLLKELLSPIT--TVEAV-- 255
+EG A+I + S + K E + PR +L E + ++ V+A+
Sbjct: 143 EEGEAHIHTVAQYGTEEQFSRTATTGKGEYSQPR-----TELFAEFAAALSRMDVDAIIL 197
Query: 256 ------KMDNKVLLENKS-----KFLLVHSSSAFKHSLKEILADPTVTSKMQDTKA---- 300
K D + +++ + K +V +++ + E+L V T+
Sbjct: 198 AGPGFTKQDAEEYIQSNNPEIIDKLTIVDTAAVGDRGVHEVLKRGAVDEVQTQTRISAEA 257
Query: 301 --LD--------PSRAFYGYRHVSAANESQAIDTLLIADCLFR 333
+D + YG V+ A E A+D LL+ D R
Sbjct: 258 ELIDELMEGIATGEKIAYGIDEVAKAAEFGAVDDLLVVDDQLR 300
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 19 LVPEESEDMWHAYNLIAEGDSVRASTIRKVQ-SESNTGSSTSSRVRTMLTISVESIDFDT 77
LVPE +D+WH +++ GD V T R++Q ++ N + R ++TI V ++F
Sbjct: 18 LVPENVDDLWHLSHVLEPGDRVGGDTTRRIQRNDENLRDTGGQREHLVVTIEVADVEFAR 77
Query: 78 QACVLRL 84
A LR+
Sbjct: 78 FANRLRV 84
>sp|B9LQI7|PELO_HALLT Protein pelota homolog OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pelA PE=3 SV=1
Length = 355
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 132/319 (41%), Gaps = 59/319 (18%)
Query: 52 SNTGSSTSSRVRTMLTISVESIDFDTQACVLRLKESEDMWHAYNLITEGDSVRASTIRKV 111
S+ G R R LT+ E++D D+WH +++ GD V T R++
Sbjct: 4 SDRGYGEEGRER--LTLVPENVD--------------DLWHLAHVLEPGDLVEGDTTRRI 47
Query: 112 QSESNTGSSTSS-RVRTMLTISVESIDFDTQACVLRLKGRNIQENQYVKMGAYHTLDLEL 170
Q + T R +T+ V+ ++F A LR+ G + ++ ++ A+HT+++E
Sbjct: 48 QRNDDQMRDTGGQREHLFVTLQVDEVEFARFANRLRVSGVIVGCSREDQLNAHHTINVEE 107
Query: 171 NRKFELSKPEWDSIALERIEVACNIEKTADVAAVMMQEGLANIMLIT-------ASMSLV 223
+ + + K + ER+E A + DVA ++EG A + + AS +
Sbjct: 108 HDEITVEK-HFKPDQTERLEEATEAAENPDVAIATVEEGAAYVHTVQQYGTEEYASFTKP 166
Query: 224 RTKIETNIPRKRRDNKDLLKELLSPITTVEA----------VKMDNKVLLENKSKFLL-- 271
K + + PR ++L EL + ++A K D + + + L
Sbjct: 167 TGKGDYSRPR-----EELFAELGEALAHLDADAVILAGPGFTKQDALDYITEEYRDLADR 221
Query: 272 ---VHSSSAFKHSLKEILADPTVTSKMQDTK--------------ALDPSRAFYGYRHVS 314
V +S+A + E+L V ++T+ ++A YG V+
Sbjct: 222 ITTVDTSAAGDRGVHEVLKRGAVDEVQKETRISKEATLIDDLTAEIAQGAKATYGPEDVA 281
Query: 315 AANESQAIDTLLIADCLFR 333
A E AI+TLL+ D R
Sbjct: 282 EAAEFGAIETLLVVDDRLR 300
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 19 LVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS-RVRTMLTISVESIDFDT 77
LVPE +D+WH +++ GD V T R++Q + T R +T+ V+ ++F
Sbjct: 18 LVPENVDDLWHLAHVLEPGDLVEGDTTRRIQRNDDQMRDTGGQREHLFVTLQVDEVEFAR 77
Query: 78 QACVLRL 84
A LR+
Sbjct: 78 FANRLRV 84
>sp|A8A935|PELO_IGNH4 Protein pelota homolog OS=Ignicoccus hospitalis (strain KIN4/I /
DSM 18386 / JCM 14125) GN=pelA PE=3 SV=1
Length = 346
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 39/293 (13%)
Query: 82 LRLKESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQ 141
+R+++ ED+W ++ + GD VRA T R V GSS ++ LTI V +F
Sbjct: 15 VRVEDEEDVWILHSALRPGDLVRARTARSV-----AGSSGKEKIPMTLTIKVTGSEFQAF 69
Query: 142 ACVLRLKGRNIQ-ENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTAD 200
+ VLR+KG ++ +++ +G++H + + ++ + + + LER++ +
Sbjct: 70 SNVLRVKGVVVEGPDKFGLIGSHHAIKVYPGKEITIIRERGLAQLLERLKKGEERKPQVP 129
Query: 201 VAAVMMQE-------GLANIMLITASMSLVRTKIETNIPRKRRDNKDLLKEL-------- 245
V AV E G + S+ L E R +L K +
Sbjct: 130 VLAVDYDEYSLAVVRGQGIEWVFEGSLRLPGKGDEGREAATERKINELAKRVSEELKLRN 189
Query: 246 LSPITTVEAVKMDNKV---LLENKSKFLLVHSSSAFKHSLKEILADPT---VTSKMQDTK 299
L + V + +KV L E K + +SS + + E + + V +++ K
Sbjct: 190 LDHVVVVGPGFLKDKVAQRLSEEGFKVKVDSASSGGRAGVLEAIRKGSLRGVAKELESIK 249
Query: 300 ALDP------------SRAFYGYRHVSAANESQAIDTLLIADCLFRNSDLNER 340
AL+ A YG A ++ A+ TL+I+D L + DL ER
Sbjct: 250 ALEALEEFVKHVARGDGYALYGVDDCMTAAQANAVKTLIISDDLLHSPDLGER 302
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 22 EESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACV 81
E+ ED+W ++ + GD VRA T R V GSS ++ LTI V +F + V
Sbjct: 18 EDEEDVWILHSALRPGDLVRARTARSV-----AGSSGKEKIPMTLTIKVTGSEFQAFSNV 72
Query: 82 LRLK 85
LR+K
Sbjct: 73 LRVK 76
>sp|B8GIR5|PELO_METPE Protein pelota homolog OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=pelA PE=3 SV=1
Length = 340
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDFDTQACVLR 146
+D+WH +LI GD V A T R V++ ++ + R + + I VE ++F + LR
Sbjct: 23 DDIWHLSHLIAPGDLVFAQTFRSVETATDKLRPEKAEKRPVRIGIRVEKVEFHQYSSRLR 82
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPE-WDSIALERIEVACNIEKTADVAAVM 205
+ G I+ V G+YHTL+LE N FE+S W ER++ A N + V +
Sbjct: 83 VTGL-IESGPDV--GSYHTLNLEPN--FEVSVIRFWSKSDRERVDRAVNSSGSGLVHVLA 137
Query: 206 MQEGLANIMLI 216
++EG A + I
Sbjct: 138 IEEGEAELFRI 148
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 11 KDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTIS 69
+ G + L PE +D+WH +LIA GD V A T R V++ ++ + R + + I
Sbjct: 9 RQGYGEIRLFPESVDDIWHLSHLIAPGDLVFAQTFRSVETATDKLRPEKAEKRPVRIGIR 68
Query: 70 VESIDFDTQACVLR----LKESEDM--WHAYNL 96
VE ++F + LR ++ D+ +H NL
Sbjct: 69 VEKVEFHQYSSRLRVTGLIESGPDVGSYHTLNL 101
>sp|A6UR75|PELO_METVS Protein pelota homolog OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=pelA PE=3 SV=1
Length = 348
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNT-GSSTSSRVRTMLTISVESIDFDTQACVLR 146
+D+WH +++ ++V + T R+ + + + + ++ R L I VE + F + LR
Sbjct: 21 DDLWHLSHIVQAYNAVYSVTERRTEDKGDKLRADRGTKRRVFLGIKVEKVSFHEEVNRLR 80
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G+ I + + +G+YHTLD+E + + K W L R++ A K V V++
Sbjct: 81 VSGKIIHAPEDIPIGSYHTLDIEPFTQISIQK-NWKKWDLTRLKEAEESGKRPKVVVVIL 139
Query: 207 QEGLANIMLI 216
+ A+I +
Sbjct: 140 DDSEADIFTV 149
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 6 KNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNT-GSSTSSRVRT 64
K I + + ++ ++PE +D+WH +++ ++V + T R+ + + + + ++ R
Sbjct: 2 KIIQEIPEKNIIKVMPENLDDLWHLSHIVQAYNAVYSVTERRTEDKGDKLRADRGTKRRV 61
Query: 65 MLTISVESIDFDTQACVLRLKESEDMWHA 93
L I VE + F + V RL+ S + HA
Sbjct: 62 FLGIKVEKVSFHEE--VNRLRVSGKIIHA 88
>sp|Q9HPR5|PELO_HALSA Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=pelA PE=3 SV=1
Length = 357
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 112/280 (40%), Gaps = 36/280 (12%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS-RVRTMLTISVESIDFDTQACVLR 146
+D+WH ++ GD V T R++Q + T R +TI V ++F + LR
Sbjct: 24 DDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTGGEREHMFVTIDVGDVEFHKFSNRLR 83
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G ++ ++G +HTL++ + E+ K W L R+ A DVA +
Sbjct: 84 VSGTIEDCSREDQLGLHHTLNVAEREELEVEK-HWQPDQLNRLNEAVEATDQPDVAIATV 142
Query: 207 QEGLANIMLI-------TASMSLVRTKIETNIPRKRRDNKDLLKELLS------------ 247
+EG A+I ++ S + K E N R R + L + L+
Sbjct: 143 EEGEAHIHVVQQYGVDEQGSFTATTGKGEQN-DRGRDELFGTLADALARMQADAIILAGP 201
Query: 248 PITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADPTVTSKMQDTKALDPS--- 304
T +A+ + + + +V +S+ + E+L V ++T+ + S
Sbjct: 202 GFTKQDALDHITEEYPDLQETITMVDTSAVGGRGVHEVLKRGAVEDVQEETRIAEESELI 261
Query: 305 -----------RAFYGYRHVSAANESQAIDTLLIADCLFR 333
+A YG V A E A++ LLI D R
Sbjct: 262 DELTTQMATDGKAAYGIDEVQKAVEFGAVEDLLILDERLR 301
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 17 VALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS-RVRTMLTISVESIDF 75
+ LVPE +D+WH ++ GD V T R++Q + T R +TI V ++F
Sbjct: 16 ITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTGGEREHMFVTIDVGDVEF 75
Query: 76 DTQACVLRL 84
+ LR+
Sbjct: 76 HKFSNRLRV 84
>sp|B0R5R9|PELO_HALS3 Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=pelA PE=3 SV=1
Length = 357
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 112/280 (40%), Gaps = 36/280 (12%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSS-RVRTMLTISVESIDFDTQACVLR 146
+D+WH ++ GD V T R++Q + T R +TI V ++F + LR
Sbjct: 24 DDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTGGEREHMFVTIDVGDVEFHKFSNRLR 83
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTADVAAVMM 206
+ G ++ ++G +HTL++ + E+ K W L R+ A DVA +
Sbjct: 84 VSGTIEDCSREDQLGLHHTLNVAEREELEVEK-HWQPDQLNRLNEAVEATDQPDVAIATV 142
Query: 207 QEGLANIMLI-------TASMSLVRTKIETNIPRKRRDNKDLLKELLS------------ 247
+EG A+I ++ S + K E N R R + L + L+
Sbjct: 143 EEGEAHIHVVQQYGVDEQGSFTATTGKGEQN-DRGRDELFGTLADALARMQADAIILAGP 201
Query: 248 PITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEILADPTVTSKMQDTKALDPS--- 304
T +A+ + + + +V +S+ + E+L V ++T+ + S
Sbjct: 202 GFTKQDALDHITEEYPDLQETITMVDTSAVGGRGVHEVLKRGAVEDVQEETRIAEESELI 261
Query: 305 -----------RAFYGYRHVSAANESQAIDTLLIADCLFR 333
+A YG V A E A++ LLI D R
Sbjct: 262 DELTTQMATDGKAAYGIDEVQKAVEFGAVEDLLILDERLR 301
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 17 VALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS-RVRTMLTISVESIDF 75
+ LVPE +D+WH ++ GD V T R++Q + T R +TI V ++F
Sbjct: 16 ITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTGGEREHMFVTIDVGDVEF 75
Query: 76 DTQACVLRL 84
+ LR+
Sbjct: 76 HKFSNRLRV 84
>sp|B1L659|PELO_KORCO Protein pelota homolog OS=Korarchaeum cryptofilum (strain OPF8)
GN=pelA PE=3 SV=1
Length = 355
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 120/285 (42%), Gaps = 50/285 (17%)
Query: 82 LRLKESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQ 141
LR+ D++ ++I EGD + T+R+V+ E S R+ +LTI V+ + D
Sbjct: 15 LRVDNLNDIYWLASIIEEGDLITMKTLRRVKQEGIRADS-GERIPMILTIEVDKVKLDPY 73
Query: 142 ACVLRLKG-RNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTAD 200
+ LR+ G + +++ G +HT ++ + K EW LE ++ A ++ + +
Sbjct: 74 SSRLRISGVVRVGPDKFGIQGQHHTFSVDEGSSLTIVKKEWRKTHLEILKRAESMSEKGE 133
Query: 201 VAAVMMQEGLANIM----LITASMSLVRTKIETNIPRKRRDNK---------DLLKELLS 247
V V M + A I + ++ +R+++ + + + R+ + D L+EL S
Sbjct: 134 VLLVAMDDEGATIAKAGSMRVEEIAYIRSRLPSKMDTRGREGEERRYFSEILDTLRELYS 193
Query: 248 PITTVEAVKMDNKVLLENKSKFLLVHSSSAFKHSLKEI--LADPTVTSKMQDTKALDPSR 305
I K + ++V FK DP + KM++ A + +
Sbjct: 194 KI----------------KPRAIVVGGPGFFKDRFLSYARAKDPEMGEKMREGDASNAT- 236
Query: 306 AFYG-------------YRHVSAANESQAIDTLLIADCLFRNSDL 337
F G R + A + A++ + + L +NSDL
Sbjct: 237 -FSGVLEMIRRGEADKVLRELDLAKDMAAVEEIF--ELLSKNSDL 278
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 13 KSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVES 72
K G+V L + D++ ++I EGD + T+R+V+ E S R+ +LTI V+
Sbjct: 9 KRGLVKLRVDNLNDIYWLASIIEEGDLITMKTLRRVKQEGIRADS-GERIPMILTIEVDK 67
Query: 73 IDFDTQACVLRL 84
+ D + LR+
Sbjct: 68 VKLDPYSSRLRI 79
>sp|B1Y9M9|PELO_PYRNV Protein pelota homolog OS=Pyrobaculum neutrophilum (strain DSM 2338
/ JCM 9278 / V24Sta) GN=pelA PE=3 SV=1
Length = 330
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACVLRL 147
ED++ Y L+ GD VR T+R+ + E G+ RV+ L + VES+++ LR+
Sbjct: 20 EDLYFVYLLVERGDVVRGWTVREYKPE---GAKEGERVKMYLAVRVESLEYHKFRGSLRI 76
Query: 148 KGR--NIQENQYVKMGAYHTLDLELNRKFELSK 178
+G +QE G HT D+ R+ E+ K
Sbjct: 77 RGPVVEVQEGVEGVKGRRHTFDVVPGREIEIEK 109
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 17 VALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFD 76
V +VPE ED++ Y L+ GD VR T+R+ + E G+ RV+ L + VES+++
Sbjct: 12 VRVVPEREEDLYFVYLLVERGDVVRGWTVREYKPE---GAKEGERVKMYLAVRVESLEYH 68
Query: 77 TQACVLRLK 85
LR++
Sbjct: 69 KFRGSLRIR 77
>sp|O29421|PELO_ARCFU Protein pelota homolog OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=pelA
PE=1 SV=1
Length = 344
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 22/141 (15%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDFDTQACVLRL 147
+D+WH +I +GD V A+T R QS S+ S V L I VE ++F A LR+
Sbjct: 23 DDLWHLRFIIEKGDVVFATTKRASQS-SDKLRSDKEMVTVRLGIEVEKVEFHRFANRLRV 81
Query: 148 KGR---NIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIE-----------VAC 193
G+ I+E+ YHTL++ + ++ + K +W LER+ V
Sbjct: 82 SGKIVAGIEES------GYHTLNITVGKELSIIK-KWKPEQLERLRRAVEDSNRPEIVML 134
Query: 194 NIEKTADVAAVMMQEGLANIM 214
IE+ VA V+ Q G+ I
Sbjct: 135 TIEEGYAVAGVLRQWGVEEIF 155
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 1 MKLVHKNINDKDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSS 60
M++V +N+ +D G + L+PE +D+WH +I +GD V A+T R QS S+ S
Sbjct: 1 MQIVEENL--RDNEGEIKLIPETLDDLWHLRFIIEKGDVVFATTKRASQS-SDKLRSDKE 57
Query: 61 RVRTMLTISVESIDFDTQACVLRLKE------SEDMWHAYNLITEGDSVRASTIRKVQSE 114
V L I VE ++F A LR+ E +H N IT G + S I+K + E
Sbjct: 58 MVTVRLGIEVEKVEFHRFANRLRVSGKIVAGIEESGYHTLN-ITVGKEL--SIIKKWKPE 114
Query: 115 S 115
Sbjct: 115 Q 115
>sp|Q8ZTE8|PELO_PYRAE Protein pelota homolog OS=Pyrobaculum aerophilum (strain ATCC 51768
/ IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=pelA PE=3
SV=1
Length = 332
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 7/111 (6%)
Query: 74 DFDTQACVLRL--KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTI 131
+ D + V+R+ + ED++ Y LI +GD +R T+R+ + + G R++ L I
Sbjct: 4 EIDKKRLVIRVVPEREEDLYFIYLLIDKGDIIRGWTVREYKPD---GVKEGERIKMYLAI 60
Query: 132 SVESIDFDTQACVLRLKGRNIQENQYVK--MGAYHTLDLELNRKFELSKPE 180
E++++ LR++G I+ + V+ G HT D+ + R+ E+ K E
Sbjct: 61 KAEALEYHKFRGSLRVRGPVIEVQEGVEGVKGRRHTFDISIGREIEIEKNE 111
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 16 VVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVESIDF 75
V+ +VPE ED++ Y LI +GD +R T+R+ + + G R++ L I E++++
Sbjct: 11 VIRVVPEREEDLYFIYLLIDKGDIIRGWTVREYKPD---GVKEGERIKMYLAIKAEALEY 67
Query: 76 DTQACVLRLK 85
LR++
Sbjct: 68 HKFRGSLRVR 77
>sp|Q9HJ74|PELO_THEAC Protein pelota homolog OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=pelA PE=1 SV=1
Length = 339
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 82 LRLKESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTS-SRVRTMLTISVESIDFDT 140
+R++ +D+W+ N+++EGD V A T R+V+ ++ S R+ + + VE I+F
Sbjct: 15 IRIESLDDLWYLRNILSEGDEVSAITFRRVEESADVQRSRERERIPITIRLKVEKIEFQD 74
Query: 141 QACVLRLKGRNIQENQYVKMGAYHTLDLELNRKFELSKPEWDSIALERIEVACNIEKTAD 200
LR+ G I+ + K G + ++ + ++ + ++K EWD ++ ++ A + +
Sbjct: 75 FDNRLRILGTVIEGPEDTK-GKHQSITVTVDSEISITK-EWDDQHIDLLKEATDEKYVTV 132
Query: 201 VAAVMMQEGLANIMLI 216
AV M E A I LI
Sbjct: 133 YTAVAMDEDEAQIFLI 148
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 22 EESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTS-SRVRTMLTISVESI---DFDT 77
E +D+W+ N+++EGD V A T R+V+ ++ S R+ + + VE I DFD
Sbjct: 18 ESLDDLWYLRNILSEGDEVSAITFRRVEESADVQRSRERERIPITIRLKVEKIEFQDFDN 77
Query: 78 QACVL 82
+ +L
Sbjct: 78 RLRIL 82
>sp|A3CU20|PELO_METMJ Protein pelota homolog OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=pelA PE=3 SV=1
Length = 341
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 88 EDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTISVESIDFDTQACVLR 146
+D+WH +L+ GD V A+T R V++ ++ R + L I VE ++F LR
Sbjct: 23 DDLWHLSHLVGPGDLVFATTFRSVEAATDKLRPEKVEKRPVRLGIWVEKVEFHQHTNRLR 82
Query: 147 LKGRNIQENQYVKMGAYHTLDLELNRKFELS-KPEWDSIALERIEVACNIEKTADVAAVM 205
+ G I E+ V + A+HTL++E FE+S W + ERI A + V V
Sbjct: 83 IAG--IIESG-VDVAAHHTLNVEAG--FEISVVKRWRPVDCERIRRAVDASAYGVVHVVS 137
Query: 206 MQEGLANI 213
++EG A I
Sbjct: 138 VEEGEAQI 145
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 11 KDKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTM-LTIS 69
K + G + L PE +D+WH +L+ GD V A+T R V++ ++ R + L I
Sbjct: 9 KRQFGEIRLFPETLDDLWHLSHLVGPGDLVFATTFRSVEAATDKLRPEKVEKRPVRLGIW 68
Query: 70 VESIDFDTQACVLRL 84
VE ++F LR+
Sbjct: 69 VEKVEFHQHTNRLRI 83
>sp|A3MX13|PELO_PYRCJ Protein pelota homolog OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=pelA PE=3 SV=1
Length = 332
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 12 DKSGVVALVPEESEDMWHAYNLIAEGDSVRASTIRKVQSESNTGSSTSSRVRTMLTISVE 71
+K VV +VPE ED++ Y LI GD VR T+R+ + E G+ RV+ L ISVE
Sbjct: 7 EKRRVVRIVPEREEDLYFIYLLIDRGDIVRGWTVREYKPE---GAKEGERVKMYLGISVE 63
Query: 72 SIDFDTQACVLRLK 85
I++ LR++
Sbjct: 64 KIEYHKFRSSLRVR 77
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 73 IDFDTQACVLRL--KESEDMWHAYNLITEGDSVRASTIRKVQSESNTGSSTSSRVRTMLT 130
+ D + V+R+ + ED++ Y LI GD VR T+R+ + E G+ RV+ L
Sbjct: 3 FELDEKRRVVRIVPEREEDLYFIYLLIDRGDIVRGWTVREYKPE---GAKEGERVKMYLG 59
Query: 131 ISVESIDFDTQACVLRLKGRNIQENQYVKM--GAYHTLDLELNRKFELSKPEWDSIALER 188
ISVE I++ LR++G ++ + V+ G HT ++ R+ + K
Sbjct: 60 ISVEKIEYHKFRSSLRVRGTVVEVQEEVEGVKGRRHTFEIVPGREVVVEKRRGS------ 113
Query: 189 IEVACNIEKTADVAAVMMQEGLANIMLIT--------ASMSLVRTKIETNIP----RKRR 236
+EV I A+VA L I+L++ A +S + +I +P R +R
Sbjct: 114 VEVVKRILDMANVA-------LPRILLVSIDDEEAALAYISALGAEIMYTVPNQVNRGKR 166
Query: 237 DNKDLLKELLSPITT-VEAVKMDNKV 261
+ LL++ + T VE VK K+
Sbjct: 167 -GESLLEDFFKSVNTLVEEVKRLRKI 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.126 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,363,518
Number of Sequences: 539616
Number of extensions: 3612018
Number of successful extensions: 9064
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 8786
Number of HSP's gapped (non-prelim): 214
length of query: 342
length of database: 191,569,459
effective HSP length: 118
effective length of query: 224
effective length of database: 127,894,771
effective search space: 28648428704
effective search space used: 28648428704
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)