BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17309
(824 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VPJ|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12
Length = 301
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 147/288 (51%), Gaps = 6/288 (2%)
Query: 459 HEILFAIGGW-SGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGF 517
+E+L +GG+ S SP D VE YD + W + + R Y + + IYVIGG+
Sbjct: 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITR--KRRYVASVSLHDRIYVIGGY 71
Query: 518 DGNEYYNSCRCFNAVTK---VWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVE 574
DG +S C + VW +APMN +R D+IY GG++G RR S+E
Sbjct: 72 DGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSME 131
Query: 575 KYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE 634
+Y+ +QWS++ M R A G IY GG++G N LNS E YDP WT +
Sbjct: 132 RYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT 191
Query: 635 PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV 694
PM +RSG ++ IYV+GGF+G + + + E YN T +W+ V M PR V
Sbjct: 192 PMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV 251
Query: 695 IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 742
+ ++AI G++G + + +ECYD D W T M R CV+
Sbjct: 252 LRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVL 299
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 140/254 (55%), Gaps = 9/254 (3%)
Query: 497 GPRAYHGTAVIGYN--IYVIGGFDGNEY-YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553
GPR A +G N + V+GGF + + ++ T+ W + + KR YV++
Sbjct: 4 GPRT---RARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS 60
Query: 554 HQDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAPMNVERSDASATTLQGKIYITGG 610
D IY +GGY+G+ R +SVE +YT ++ W +APMNV R A ATTL IY++GG
Sbjct: 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGG 120
Query: 611 FNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKY 670
F+G S E YDP +QW+++ M+ R G + IY +GG++G++ + + EKY
Sbjct: 121 FDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKY 180
Query: 671 NPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDM 730
+P T W+ V M RS + +++D I+ +GGF+G + VE Y+ +TD W T M
Sbjct: 181 DPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM 240
Query: 731 NIYRSALSACVIMG 744
R + A V+ G
Sbjct: 241 TTPRCYVGATVLRG 254
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 45 HEILFAIGGW-SGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGF 103
+E+L +GG+ S SP D VE YD + W + + R Y + + IYVIGG+
Sbjct: 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITR--KRRYVASVSLHDRIYVIGGY 71
Query: 104 DGNEYYNSCRCFNAVTK---VWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVE 160
DG +S C + VW +APMN +R D+IY GG++G RR S+E
Sbjct: 72 DGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSME 131
Query: 161 KYNYTENQWSLIAPMNCMIQN-----VTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA 215
+Y+ +QWS++ M + + IY +GG+DG NS ++ T W +
Sbjct: 132 RYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVT 191
Query: 216 PMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYN 252
PM KR A+ D IY +GG++G +SVE YN
Sbjct: 192 PMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYN 228
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Query: 36 PEIARPR------VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMG-PRAYH 88
P I R R H+ ++ IGG+ G S VE D AD V PM R
Sbjct: 47 PSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA 106
Query: 89 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMG 148
G +G IYV GGFDG+ + S ++ W + M R V VIY +G
Sbjct: 107 GATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLG 166
Query: 149 GYNGQRRQNSVEKYNYTENQWSLIAPM-----NCMIQNVTYNIYVIGGFDGNEYYNSCRC 203
GY+G NSVEKY+ W+ + PM + + +IYV+GGFDG + +S
Sbjct: 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEA 226
Query: 204 FNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYN 252
+N T W + M RCYV V + +YA+ GY+G +S+E Y+
Sbjct: 227 YNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYD 275
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
Query: 46 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDG 105
++++ GG+ G +E YD D+W + D R G V IY +GG+DG
Sbjct: 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG--DMQTAREGAGLVVASGVIYCLGGYDG 170
Query: 106 NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYT 165
NS ++ T W + PM KR A+ D IY +GG++G +SVE YN
Sbjct: 171 LNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIR 230
Query: 166 ENQWSLIAPMN---CMIQNVTYN--IYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK 220
+ W+ + M C + +Y I G+DGN +S C++ + W+ + M +
Sbjct: 231 TDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQ 290
Query: 221 RC 222
RC
Sbjct: 291 RC 292
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 428 IETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRW 487
I+ + L D++ + G V V +++ +GG+ G + + VE YD W
Sbjct: 137 IDQWSMLGDMQTAREGAGLV---------VASGVIYCLGGYDGLNILNSVEKYDPHTGHW 187
Query: 488 VKIDQVDPMGP-RAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR 546
V PM R+ G A++ +IYV+GGFDG + +S +N T W + M R
Sbjct: 188 TN---VTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR 244
Query: 547 CYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQ 602
CYV V + +YA+ GY+G +S+E Y+ + W ++ M +R DA L+
Sbjct: 245 CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 83 GPRAYHGTAVIGYN--IYVIGGFDGNEY-YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 139
GPR A +G N + V+GGF + + ++ T+ W + + KR YV++
Sbjct: 4 GPRT---RARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS 60
Query: 140 HQDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAPMNC---MIQNVTYN--IYVIGG 191
D IY +GGY+G+ R +SVE +YT ++ W +APMN + T IYV GG
Sbjct: 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGG 120
Query: 192 FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKY 251
FDG+ + S ++ W + M R V VIY +GGY+G NSVEKY
Sbjct: 121 FDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKY 180
Query: 252 N 252
+
Sbjct: 181 D 181
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 605 IYITGGFNGHNC-LNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSR 663
+ + GGF ++ E YDP+ +W+ + + +R V+ ++ H+ IYVIGG++G SR
Sbjct: 17 LLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSR 76
Query: 664 MCNGEKYNPVTK---TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEK 720
+ + E + W V M R + DMI+ GGF+G +E YD
Sbjct: 77 LSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPN 136
Query: 721 TDEWYEATDMNIYRSALSACVIMGL 745
D+W DM R V G+
Sbjct: 137 IDQWSMLGDMQTAREGAGLVVASGV 161
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 186 IYVIGGFDGNEY-YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRR 244
+ V+GGF + + ++ T+ W + + KR YV++ D IY +GGY+G+ R
Sbjct: 17 LLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSR 76
Query: 245 QNSVEKYNYTENQDKI 260
+SVE +YT ++D +
Sbjct: 77 LSSVECLDYTADEDGV 92
>pdb|3VNG|A Chain A, Crystal Structure Of Keap1 In Complex With Synthetic Small
Molecular Based On A Co-crystallization
pdb|3VNH|A Chain A, Crystal Structure Of Keap1 Soaked With Synthetic Small
Molecular
Length = 309
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 153/301 (50%), Gaps = 8/301 (2%)
Query: 445 GEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGT 504
G VP P+V +++ GG+ S ++E Y+ W+++ D PR+
Sbjct: 12 GLVPRGSHMAPKV-GRLIYTAGGYFRQS-LSYLEAYNPSDGTWLRL--ADLQVPRSGLAG 67
Query: 505 AVIGYNIYVIGGF----DGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYA 560
V+G +Y +GG DGN ++ C+N +T W APM+ R + V IYA
Sbjct: 68 CVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYA 127
Query: 561 MGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSC 620
+GG +G NSVE+Y ++W L+APM R L +Y GGF+G N LNS
Sbjct: 128 VGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSA 187
Query: 621 EVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 680
E Y PE N+W +I M RSG H CIY GG++G ++ + E+Y+ T+TW+ V
Sbjct: 188 ECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFV 247
Query: 681 PDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSAC 740
M + RS I V I+ +GG++G T + VECYD TD W E T M RS +
Sbjct: 248 APMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVA 307
Query: 741 V 741
V
Sbjct: 308 V 308
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 5/251 (1%)
Query: 498 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDV 557
PR H +G IY GG+ + + +N W +A + R ++ V +
Sbjct: 15 PRGSHMAPKVGRLIYTAGGYF-RQSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGL 73
Query: 558 IYAMGGYN----GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG 613
+YA+GG N G ++++ YN NQWS APM+V R+ + G IY GG +G
Sbjct: 74 LYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG 133
Query: 614 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPV 673
NS E Y+PE ++W L+ PM RR GV + +Y +GGF+G +R+ + E Y P
Sbjct: 134 CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPE 193
Query: 674 TKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIY 733
W + M RS + V+ + I+A GG++G + VE YD +T+ W M
Sbjct: 194 RNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 253
Query: 734 RSALSACVIMG 744
RSAL V G
Sbjct: 254 RSALGITVHQG 264
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 19/219 (8%)
Query: 47 ILFAIGGWS----GGSPTDFVETYDTRADRWVKIDQVDPMG-PRAYHGTAVIGYNIYVIG 101
+L+A+GG + G + + ++ Y+ ++W PM PR G VI +IY +G
Sbjct: 73 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQW---SPCAPMSVPRNRIGVGVIDGHIYAVG 129
Query: 102 GFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEK 161
G G ++NS + W +APM +R V AV ++YA+GG++G R NS E
Sbjct: 130 GSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAEC 189
Query: 162 YNYTENQWSLIAPMN--------CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 213
Y N+W +I MN C++ N IY GG+DG + NS ++ T+ W
Sbjct: 190 YYPERNEWRMITAMNTIRSGAGVCVLHNC---IYAAGGYDGQDQLNSVERYDVETETWTF 246
Query: 214 IAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYN 252
+APM +R + VHQ IY +GGY+G +SVE Y+
Sbjct: 247 VAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYD 285
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 48 LFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYH-GTAVIGYNIYVIGGFDGN 106
++A+GG G + VE Y+ D W V PM R G AV+ +Y +GGFDG
Sbjct: 125 IYAVGGSHGCIHHNSVERYEPERDEW---HLVAPMLTRRIGVGVAVLNRLLYAVGGFDGT 181
Query: 107 EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTE 166
NS C+ W+ I MN R V + IYA GGY+GQ + NSVE+Y+
Sbjct: 182 NRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVET 241
Query: 167 NQWSLIAPMN-----CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR 221
W+ +APM I IYV+GG+DG+ + +S C++ T W E+ M R
Sbjct: 242 ETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGR 301
Query: 222 CYVSTAV 228
V AV
Sbjct: 302 SGVGVAV 308
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 10/183 (5%)
Query: 84 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDV 143
PR H +G IY GG+ + + +N W +A + R ++ V +
Sbjct: 15 PRGSHMAPKVGRLIYTAGGYF-RQSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGL 73
Query: 144 IYAMGGYN----GQRRQNSVEKYNYTENQWSLIAPMNC-----MIQNVTYNIYVIGGFDG 194
+YA+GG N G ++++ YN NQWS APM+ + + +IY +GG G
Sbjct: 74 LYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG 133
Query: 195 NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYT 254
++NS + W +APM +R V AV ++YA+GG++G R NS E Y
Sbjct: 134 CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPE 193
Query: 255 ENQ 257
N+
Sbjct: 194 RNE 196
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 43 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGG 102
V + +L+A+GG+ G + + E Y + W I ++ + R+ G V+ IY GG
Sbjct: 167 VLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI--RSGAGVCVLHNCIYAAGG 224
Query: 103 FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKY 162
+DG + NS ++ T+ W +APM +R + VHQ IY +GGY+G +SVE Y
Sbjct: 225 YDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECY 284
Query: 163 NYTENQWSLIAPM 175
+ + WS + M
Sbjct: 285 DPDTDTWSEVTRM 297
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 43 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGP-RAYHGTAVIGYNIYVIG 101
V H ++A GG+ G + VE YD + W V PM R+ G V IYV+G
Sbjct: 214 VLHNCIYAAGGYDGQDQLNSVERYDVETETWTF---VAPMKHRRSALGITVHQGRIYVLG 270
Query: 102 GFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 139
G+DG+ + +S C++ T W E+ M R V AV
Sbjct: 271 GYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 308
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 686 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 745
PR + + +I+ GG+ ++ ++E Y+ W D+ + RS L+ CV+ GL
Sbjct: 15 PRGSHMAPKVGRLIYTAGGYF-RQSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGL 73
>pdb|1U6D|X Chain X, Crystal Structure Of The Kelch Domain Of Human Keap1
pdb|2FLU|X Chain X, Crystal Structure Of The Kelch-Neh2 Complex
Length = 308
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 150/296 (50%), Gaps = 12/296 (4%)
Query: 455 PRVPH-----EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGY 509
PR H +++ GG+ S ++E Y+ W+++ D PR+ V+G
Sbjct: 15 PRGSHAPKVGRLIYTAGGYFRQS-LSYLEAYNPSDGTWLRL--ADLQVPRSGLAGCVVGG 71
Query: 510 NIYVIGGF----DGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN 565
+Y +GG DGN ++ C+N +T W APM+ R + V IYA+GG +
Sbjct: 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSH 131
Query: 566 GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDP 625
G NSVE+Y ++W L+APM R L +Y GGF+G N LNS E Y P
Sbjct: 132 GCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYP 191
Query: 626 ECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN 685
E N+W +I M RSG H CIY GG++G ++ + E+Y+ T+TW+ V M +
Sbjct: 192 ERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKH 251
Query: 686 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACV 741
RS I V I+ +GG++G T + VECYD TD W E T M RS + V
Sbjct: 252 RRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 307
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 123/251 (49%), Gaps = 6/251 (2%)
Query: 498 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDV 557
PR H V G IY GG+ + + +N W +A + R ++ V +
Sbjct: 15 PRGSHAPKV-GRLIYTAGGYF-RQSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGL 72
Query: 558 IYAMGGYN----GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG 613
+YA+GG N G ++++ YN NQWS APM+V R+ + G IY GG +G
Sbjct: 73 LYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG 132
Query: 614 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPV 673
NS E Y+PE ++W L+ PM RR GV + +Y +GGF+G +R+ + E Y P
Sbjct: 133 CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPE 192
Query: 674 TKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIY 733
W + M RS + V+ + I+A GG++G + VE YD +T+ W M
Sbjct: 193 RNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 252
Query: 734 RSALSACVIMG 744
RSAL V G
Sbjct: 253 RSALGITVHQG 263
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 19/219 (8%)
Query: 47 ILFAIGGWS----GGSPTDFVETYDTRADRWVKIDQVDPMG-PRAYHGTAVIGYNIYVIG 101
+L+A+GG + G + + ++ Y+ ++W PM PR G VI +IY +G
Sbjct: 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQW---SPCAPMSVPRNRIGVGVIDGHIYAVG 128
Query: 102 GFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEK 161
G G ++NS + W +APM +R V AV ++YA+GG++G R NS E
Sbjct: 129 GSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAEC 188
Query: 162 YNYTENQWSLIAPMN--------CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 213
Y N+W +I MN C++ N IY GG+DG + NS ++ T+ W
Sbjct: 189 YYPERNEWRMITAMNTIRSGAGVCVLHNC---IYAAGGYDGQDQLNSVERYDVETETWTF 245
Query: 214 IAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYN 252
+APM +R + VHQ IY +GGY+G +SVE Y+
Sbjct: 246 VAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYD 284
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 48 LFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYH-GTAVIGYNIYVIGGFDGN 106
++A+GG G + VE Y+ D W V PM R G AV+ +Y +GGFDG
Sbjct: 124 IYAVGGSHGCIHHNSVERYEPERDEW---HLVAPMLTRRIGVGVAVLNRLLYAVGGFDGT 180
Query: 107 EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTE 166
NS C+ W+ I MN R V + IYA GGY+GQ + NSVE+Y+
Sbjct: 181 NRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVET 240
Query: 167 NQWSLIAPMN-----CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR 221
W+ +APM I IYV+GG+DG+ + +S C++ T W E+ M R
Sbjct: 241 ETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGR 300
Query: 222 CYVSTAV 228
V AV
Sbjct: 301 SGVGVAV 307
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 11/183 (6%)
Query: 84 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDV 143
PR H V G IY GG+ + + +N W +A + R ++ V +
Sbjct: 15 PRGSHAPKV-GRLIYTAGGYF-RQSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGL 72
Query: 144 IYAMGGYN----GQRRQNSVEKYNYTENQWSLIAPMNC-----MIQNVTYNIYVIGGFDG 194
+YA+GG N G ++++ YN NQWS APM+ + + +IY +GG G
Sbjct: 73 LYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG 132
Query: 195 NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYT 254
++NS + W +APM +R V AV ++YA+GG++G R NS E Y
Sbjct: 133 CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPE 192
Query: 255 ENQ 257
N+
Sbjct: 193 RNE 195
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 43 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGG 102
V + +L+A+GG+ G + + E Y + W I ++ + R+ G V+ IY GG
Sbjct: 166 VLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI--RSGAGVCVLHNCIYAAGG 223
Query: 103 FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKY 162
+DG + NS ++ T+ W +APM +R + VHQ IY +GGY+G +SVE Y
Sbjct: 224 YDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECY 283
Query: 163 NYTENQWSLIAPM 175
+ + WS + M
Sbjct: 284 DPDTDTWSEVTRM 296
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 43 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGP-RAYHGTAVIGYNIYVIG 101
V H ++A GG+ G + VE YD + W V PM R+ G V IYV+G
Sbjct: 213 VLHNCIYAAGGYDGQDQLNSVERYDVETETWTF---VAPMKHRRSALGITVHQGRIYVLG 269
Query: 102 GFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 139
G+DG+ + +S C++ T W E+ M R V AV
Sbjct: 270 GYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 307
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 686 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 745
PR + A +V +I+ GG+ ++ ++E Y+ W D+ + RS L+ CV+ GL
Sbjct: 15 PRGSHAPKV-GRLIYTAGGYF-RQSLSYLEAYNPSDGTWLRLADLQVPRSGLAGCVVGGL 72
>pdb|2DYH|A Chain A, Crystal Structure Of The Keap1 Protein In Complexed With
The N-Terminal Region Of The Nrf2 Transcription Factor
pdb|2Z32|A Chain A, Crystal Structure Of Keap1 Complexed With Prothymosin
Alpha
pdb|3ADE|A Chain A, Crystal Structure Of Keap1 In Complex With Sequestosome-
1P62
Length = 318
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 13/299 (4%)
Query: 449 TPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIG 508
P++ R +++ GG+ S ++E Y+ W+++ D PR+ V+G
Sbjct: 14 APKVGR------LIYTAGGYFRQS-LSYLEAYNPSNGSWLRL--ADLQVPRSGLAGCVVG 64
Query: 509 YNIYVIGGF----DGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGY 564
+Y +GG DGN ++ C+N +T W A M+ R + V IYA+GG
Sbjct: 65 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGS 124
Query: 565 NGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYD 624
+G +SVE+Y ++W L+APM R L +Y GGF+G N LNS E Y
Sbjct: 125 HGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYY 184
Query: 625 PECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMY 684
PE N+W +I PM RSG H CIY GG++G ++ + E+Y+ T+TW+ V M
Sbjct: 185 PERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMR 244
Query: 685 NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIM 743
+ RS I V I+ +GG++G T + VECYD +D W E T M RS + V M
Sbjct: 245 HHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPDSDTWSEVTRMTSGRSGVGVAVTM 303
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 120/242 (49%), Gaps = 5/242 (2%)
Query: 507 IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN- 565
+G IY GG+ + + +N W +A + R ++ V ++YA+GG N
Sbjct: 17 VGRLIYTAGGYF-RQSLSYLEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLLYAVGGRNN 75
Query: 566 ---GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEV 622
G ++++ YN NQWS A M+V R+ + G IY GG +G +S E
Sbjct: 76 SPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSVER 135
Query: 623 YDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD 682
Y+PE ++W L+ PM RR GV + +Y +GGF+G +R+ + E Y P W +
Sbjct: 136 YEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITP 195
Query: 683 MYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 742
M RS + V+ + I+A GG++G + VE YD +T+ W M +RSAL V
Sbjct: 196 MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMRHHRSALGITVH 255
Query: 743 MG 744
G
Sbjct: 256 QG 257
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 17/218 (7%)
Query: 47 ILFAIGGWS----GGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGG 102
+L+A+GG + G + + ++ Y+ ++W + PR G VI +IY +GG
Sbjct: 66 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSV--PRNRIGVGVIDGHIYAVGG 123
Query: 103 FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKY 162
G +++S + W +APM +R V AV ++YA+GG++G R NS E Y
Sbjct: 124 SHGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY 183
Query: 163 NYTENQWSLIAPMN--------CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 214
N+W +I PMN C++ N IY GG+DG + NS ++ T+ W +
Sbjct: 184 YPERNEWRMITPMNTIRSGAGVCVLHNC---IYAAGGYDGQDQLNSVERYDVETETWTFV 240
Query: 215 APMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYN 252
APM R + VHQ IY +GGY+G +SVE Y+
Sbjct: 241 APMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYD 278
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 48 LFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYH-GTAVIGYNIYVIGGFDGN 106
++A+GG G VE Y+ D W V PM R G AV+ +Y +GGFDG
Sbjct: 118 IYAVGGSHGCIHHSSVERYEPERDEW---HLVAPMLTRRIGVGVAVLNRLLYAVGGFDGT 174
Query: 107 EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTE 166
NS C+ W+ I PMN R V + IYA GGY+GQ + NSVE+Y+
Sbjct: 175 NRLNSAECYYPERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVET 234
Query: 167 NQWSLIAPMN-----CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR 221
W+ +APM I IYV+GG+DG+ + +S C++ + W E+ M R
Sbjct: 235 ETWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPDSDTWSEVTRMTSGR 294
Query: 222 CYVSTAV 228
V AV
Sbjct: 295 SGVGVAV 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 2 VNGKSAKLDHGKIETFKFLYD-LELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPT 60
V G + H +E ++ D L+A + +A V + +L+A+GG+ G +
Sbjct: 121 VGGSHGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVA---VLNRLLYAVGGFDGTNRL 177
Query: 61 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK 120
+ E Y + W I ++ + R+ G V+ IY GG+DG + NS ++ T+
Sbjct: 178 NSAECYYPERNEWRMITPMNTI--RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 235
Query: 121 VWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM 175
W +APM R + VHQ IY +GGY+G +SVE Y+ + WS + M
Sbjct: 236 TWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPDSDTWSEVTRM 290
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Query: 93 IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN- 151
+G IY GG+ + + +N W +A + R ++ V ++YA+GG N
Sbjct: 17 VGRLIYTAGGYF-RQSLSYLEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLLYAVGGRNN 75
Query: 152 ---GQRRQNSVEKYNYTENQWSLIAPMNC-----MIQNVTYNIYVIGGFDGNEYYNSCRC 203
G ++++ YN NQWS A M+ + + +IY +GG G +++S
Sbjct: 76 SPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSVER 135
Query: 204 FNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ 257
+ W +APM +R V AV ++YA+GG++G R NS E Y N+
Sbjct: 136 YEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE 189
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 43 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPM-GPRAYHGTAVIGYNIYVIG 101
V H ++A GG+ G + VE YD + W V PM R+ G V IYV+G
Sbjct: 207 VLHNCIYAAGGYDGQDQLNSVERYDVETETWTF---VAPMRHHRSALGITVHQGKIYVLG 263
Query: 102 GFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 139
G+DG+ + +S C++ + W E+ M R V AV
Sbjct: 264 GYDGHTFLDSVECYDPDSDTWSEVTRMTSGRSGVGVAV 301
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 695 IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 745
+ +I+ GG+ ++ ++E Y+ W D+ + RS L+ CV+ GL
Sbjct: 17 VGRLIYTAGGYF-RQSLSYLEAYNPSNGSWLRLADLQVPRSGLAGCVVGGL 66
>pdb|1X2J|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
pdb|1X2R|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
Length = 316
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 13/299 (4%)
Query: 449 TPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIG 508
P++ R +++ GG+ S ++E Y+ W+++ D PR+ V+G
Sbjct: 13 APKVGR------LIYTAGGYFRQS-LSYLEAYNPSNGSWLRL--ADLQVPRSGLAGCVVG 63
Query: 509 YNIYVIGGF----DGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGY 564
+Y +GG DGN ++ C+N +T W A M+ R + V IYA+GG
Sbjct: 64 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGS 123
Query: 565 NGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYD 624
+G +SVE+Y ++W L+APM R L +Y GGF+G N LNS E Y
Sbjct: 124 HGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYY 183
Query: 625 PECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMY 684
PE N+W +I PM RSG H CIY GG++G ++ + E+Y+ T+TW+ V M
Sbjct: 184 PERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMR 243
Query: 685 NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIM 743
+ RS I V I+ +GG++G T + VECYD +D W E T M RS + V M
Sbjct: 244 HHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPDSDTWSEVTRMTSGRSGVGVAVTM 302
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 120/242 (49%), Gaps = 5/242 (2%)
Query: 507 IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN- 565
+G IY GG+ + + +N W +A + R ++ V ++YA+GG N
Sbjct: 16 VGRLIYTAGGYF-RQSLSYLEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLLYAVGGRNN 74
Query: 566 ---GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEV 622
G ++++ YN NQWS A M+V R+ + G IY GG +G +S E
Sbjct: 75 SPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSVER 134
Query: 623 YDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD 682
Y+PE ++W L+ PM RR GV + +Y +GGF+G +R+ + E Y P W +
Sbjct: 135 YEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITP 194
Query: 683 MYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 742
M RS + V+ + I+A GG++G + VE YD +T+ W M +RSAL V
Sbjct: 195 MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMRHHRSALGITVH 254
Query: 743 MG 744
G
Sbjct: 255 QG 256
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 17/218 (7%)
Query: 47 ILFAIGGWS----GGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGG 102
+L+A+GG + G + + ++ Y+ ++W + PR G VI +IY +GG
Sbjct: 65 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSV--PRNRIGVGVIDGHIYAVGG 122
Query: 103 FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKY 162
G +++S + W +APM +R V AV ++YA+GG++G R NS E Y
Sbjct: 123 SHGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY 182
Query: 163 NYTENQWSLIAPMN--------CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 214
N+W +I PMN C++ N IY GG+DG + NS ++ T+ W +
Sbjct: 183 YPERNEWRMITPMNTIRSGAGVCVLHNC---IYAAGGYDGQDQLNSVERYDVETETWTFV 239
Query: 215 APMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYN 252
APM R + VHQ IY +GGY+G +SVE Y+
Sbjct: 240 APMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYD 277
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 48 LFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYH-GTAVIGYNIYVIGGFDGN 106
++A+GG G VE Y+ D W V PM R G AV+ +Y +GGFDG
Sbjct: 117 IYAVGGSHGCIHHSSVERYEPERDEW---HLVAPMLTRRIGVGVAVLNRLLYAVGGFDGT 173
Query: 107 EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTE 166
NS C+ W+ I PMN R V + IYA GGY+GQ + NSVE+Y+
Sbjct: 174 NRLNSAECYYPERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVET 233
Query: 167 NQWSLIAPMN-----CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR 221
W+ +APM I IYV+GG+DG+ + +S C++ + W E+ M R
Sbjct: 234 ETWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPDSDTWSEVTRMTSGR 293
Query: 222 CYVSTAV 228
V AV
Sbjct: 294 SGVGVAV 300
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 2 VNGKSAKLDHGKIETFKFLYD-LELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPT 60
V G + H +E ++ D L+A + +A V + +L+A+GG+ G +
Sbjct: 120 VGGSHGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVA---VLNRLLYAVGGFDGTNRL 176
Query: 61 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK 120
+ E Y + W I ++ + R+ G V+ IY GG+DG + NS ++ T+
Sbjct: 177 NSAECYYPERNEWRMITPMNTI--RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 234
Query: 121 VWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM 175
W +APM R + VHQ IY +GGY+G +SVE Y+ + WS + M
Sbjct: 235 TWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPDSDTWSEVTRM 289
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Query: 93 IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN- 151
+G IY GG+ + + +N W +A + R ++ V ++YA+GG N
Sbjct: 16 VGRLIYTAGGYF-RQSLSYLEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLLYAVGGRNN 74
Query: 152 ---GQRRQNSVEKYNYTENQWSLIAPMNC-----MIQNVTYNIYVIGGFDGNEYYNSCRC 203
G ++++ YN NQWS A M+ + + +IY +GG G +++S
Sbjct: 75 SPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSVER 134
Query: 204 FNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ 257
+ W +APM +R V AV ++YA+GG++G R NS E Y N+
Sbjct: 135 YEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNE 188
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 43 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPM-GPRAYHGTAVIGYNIYVIG 101
V H ++A GG+ G + VE YD + W V PM R+ G V IYV+G
Sbjct: 206 VLHNCIYAAGGYDGQDQLNSVERYDVETETWTF---VAPMRHHRSALGITVHQGKIYVLG 262
Query: 102 GFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 139
G+DG+ + +S C++ + W E+ M R V AV
Sbjct: 263 GYDGHTFLDSVECYDPDSDTWSEVTRMTSGRSGVGVAV 300
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 695 IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 745
+ +I+ GG+ ++ ++E Y+ W D+ + RS L+ CV+ GL
Sbjct: 16 VGRLIYTAGGYF-RQSLSYLEAYNPSNGSWLRLADLQVPRSGLAGCVVGGL 65
>pdb|1ZGK|A Chain A, 1.35 Angstrom Structure Of The Kelch Domain Of Keap1
Length = 308
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 143/296 (48%), Gaps = 12/296 (4%)
Query: 455 PRVPH-----EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGY 509
PR H +++ GG+ S ++E Y+ W+++ D PR+ V+G
Sbjct: 15 PRGSHAPKVGRLIYTAGGYFRQS-LSYLEAYNPSNGTWLRL--ADLQVPRSGLAGCVVGG 71
Query: 510 NIYVIGGF----DGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN 565
+Y +GG DGN ++ C+N T W AP + R + V IYA+GG +
Sbjct: 72 LLYAVGGRNNSPDGNTDSSALDCYNPXTNQWSPCAPXSVPRNRIGVGVIDGHIYAVGGSH 131
Query: 566 GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDP 625
G NSVE+Y ++W L+AP R L +Y GGF+G N LNS E Y P
Sbjct: 132 GCIHHNSVERYEPERDEWHLVAPXLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYP 191
Query: 626 ECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN 685
E N+W I RSG H CIY GG++G ++ + E+Y+ T+TW+ V +
Sbjct: 192 ERNEWRXITAXNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPXKH 251
Query: 686 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACV 741
RS I V I+ +GG++G T + VECYD TD W E T RS + V
Sbjct: 252 RRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRXTSGRSGVGVAV 307
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 6/251 (2%)
Query: 498 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDV 557
PR H V G IY GG+ + + +N W +A + R ++ V +
Sbjct: 15 PRGSHAPKV-GRLIYTAGGYF-RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGL 72
Query: 558 IYAMGGYN----GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG 613
+YA+GG N G ++++ YN NQWS AP +V R+ + G IY GG +G
Sbjct: 73 LYAVGGRNNSPDGNTDSSALDCYNPXTNQWSPCAPXSVPRNRIGVGVIDGHIYAVGGSHG 132
Query: 614 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPV 673
NS E Y+PE ++W L+ P RR GV + +Y +GGF+G +R+ + E Y P
Sbjct: 133 CIHHNSVERYEPERDEWHLVAPXLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPE 192
Query: 674 TKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIY 733
W + RS + V+ + I+A GG++G + VE YD +T+ W
Sbjct: 193 RNEWRXITAXNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPXKHR 252
Query: 734 RSALSACVIMG 744
RSAL V G
Sbjct: 253 RSALGITVHQG 263
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 17/218 (7%)
Query: 47 ILFAIGGWS----GGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGG 102
+L+A+GG + G + + ++ Y+ ++W PR G VI +IY +GG
Sbjct: 72 LLYAVGGRNNSPDGNTDSSALDCYNPXTNQWSPCAPXSV--PRNRIGVGVIDGHIYAVGG 129
Query: 103 FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKY 162
G ++NS + W +AP +R V AV ++YA+GG++G R NS E Y
Sbjct: 130 SHGCIHHNSVERYEPERDEWHLVAPXLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY 189
Query: 163 NYTENQWSLIAPMN--------CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 214
N+W I N C++ N IY GG+DG + NS ++ T+ W +
Sbjct: 190 YPERNEWRXITAXNTIRSGAGVCVLHNC---IYAAGGYDGQDQLNSVERYDVETETWTFV 246
Query: 215 APMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYN 252
AP +R + VHQ IY +GGY+G +SVE Y+
Sbjct: 247 APXKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYD 284
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 48 LFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNE 107
++A+GG G + VE Y+ D W + + R G AV+ +Y +GGFDG
Sbjct: 124 IYAVGGSHGCIHHNSVERYEPERDEWHLV--APXLTRRIGVGVAVLNRLLYAVGGFDGTN 181
Query: 108 YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTEN 167
NS C+ W+ I N R V + IYA GGY+GQ + NSVE+Y+
Sbjct: 182 RLNSAECYYPERNEWRXITAXNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 241
Query: 168 QWSLIAPMN-----CMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRC 222
W+ +AP I IYV+GG+DG+ + +S C++ T W E+ R
Sbjct: 242 TWTFVAPXKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRXTSGRS 301
Query: 223 YVSTAV 228
V AV
Sbjct: 302 GVGVAV 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 11/183 (6%)
Query: 84 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDV 143
PR H V G IY GG+ + + +N W +A + R ++ V +
Sbjct: 15 PRGSHAPKV-GRLIYTAGGYF-RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGL 72
Query: 144 IYAMGGYN----GQRRQNSVEKYNYTENQWSLIAPMNC-----MIQNVTYNIYVIGGFDG 194
+YA+GG N G ++++ YN NQWS AP + + + +IY +GG G
Sbjct: 73 LYAVGGRNNSPDGNTDSSALDCYNPXTNQWSPCAPXSVPRNRIGVGVIDGHIYAVGGSHG 132
Query: 195 NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYT 254
++NS + W +AP +R V AV ++YA+GG++G R NS E Y
Sbjct: 133 CIHHNSVERYEPERDEWHLVAPXLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPE 192
Query: 255 ENQ 257
N+
Sbjct: 193 RNE 195
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 43 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGG 102
V + +L+A+GG+ G + + E Y + W I + + R+ G V+ IY GG
Sbjct: 166 VLNRLLYAVGGFDGTNRLNSAECYYPERNEWRXITAXNTI--RSGAGVCVLHNCIYAAGG 223
Query: 103 FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKY 162
+DG + NS ++ T+ W +AP +R + VHQ IY +GGY+G +SVE Y
Sbjct: 224 YDGQDQLNSVERYDVETETWTFVAPXKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECY 283
Query: 163 NYTENQWSLI 172
+ + WS +
Sbjct: 284 DPDTDTWSEV 293
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 43 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGG 102
V H ++A GG+ G + VE YD + W + R+ G V IYV+GG
Sbjct: 213 VLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPXKHR--RSALGITVHQGRIYVLGG 270
Query: 103 FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 139
+DG+ + +S C++ T W E+ R V AV
Sbjct: 271 YDGHTFLDSVECYDPDTDTWSEVTRXTSGRSGVGVAV 307
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 686 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 745
PR + A +V +I+ GG+ ++ ++E Y+ W D+ + RS L+ CV+ GL
Sbjct: 15 PRGSHAPKV-GRLIYTAGGYF-RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGL 72
>pdb|2XN4|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
pdb|2XN4|B Chain B, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
Length = 302
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 144/294 (48%), Gaps = 7/294 (2%)
Query: 454 RPRVPHEI--LFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNI 511
R R P + L + G VE YD + +RW ++ ++ RA G + +
Sbjct: 7 RLRTPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA--GMVYMAGLV 64
Query: 512 YVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQN 571
+ +GGF+G+ + ++ V W +A M +R + AV ++YA+GG++G +
Sbjct: 65 FAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLS 124
Query: 572 SVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFN--GHNCLNSCEVYDPECNQ 629
SVE YN N+W +APMN RS + G +Y GG++ CL++ E Y+ N+
Sbjct: 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNE 184
Query: 630 WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN 689
WT I M RRSG + +Y +GG +G + E Y+P T W QV DM R N
Sbjct: 185 WTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN 244
Query: 690 FAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATD-MNIYRSALSACVI 742
+ ++ +++ +GG +G + VE Y+ TD+W + M+ RS VI
Sbjct: 245 AGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVI 298
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 123/237 (51%), Gaps = 2/237 (0%)
Query: 511 IYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQ 570
+ V+ G + S C++ + W ++A + +RC +++A+GG+NG R
Sbjct: 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRV 76
Query: 571 NSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW 630
+V+ Y+ ++QW+ +A M RS A L G +Y GGF+G L+S E Y+ + N+W
Sbjct: 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEW 136
Query: 631 TLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMC--NGEKYNPVTKTWSQVPDMYNPRS 688
+ PM RRS V +Y +GG++ SR C E YN T W+ + +M RS
Sbjct: 137 FHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRS 196
Query: 689 NFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 745
+ V++++++A+GG +G VE YD T+ W + DMN+ R C + GL
Sbjct: 197 GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGL 253
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGN 520
++FA+GG++G V++YD D+W + + R+ G AV+ +Y +GGFDG+
Sbjct: 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR--RSTLGAAVLNGLLYAVGGFDGS 120
Query: 521 EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQ--NSVEKYNY 578
+S +N + W +APMN +R V V ++YA+GGY+ RQ ++VE YN
Sbjct: 121 TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNA 180
Query: 579 TENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH 638
T N+W+ IA M+ RS A L +Y GG +G S EVYDP N W + M
Sbjct: 181 TTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM 240
Query: 639 RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD-MYNPRSNFAIEVIDD 697
R A + +YV+GG +G + + E YNP T W+ V M RS + VID
Sbjct: 241 CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDK 300
Query: 698 MI 699
+
Sbjct: 301 RL 302
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 9/218 (4%)
Query: 47 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGN 106
++FA+GG++G V++YD D+W + + R+ G AV+ +Y +GGFDG+
Sbjct: 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR--RSTLGAAVLNGLLYAVGGFDGS 120
Query: 107 EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQ--NSVEKYNY 164
+S +N + W +APMN +R V V ++YA+GGY+ RQ ++VE YN
Sbjct: 121 TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNA 180
Query: 165 TENQWSLIAPMNCMIQNVTYNI-----YVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 219
T N+W+ IA M+ + Y +GG DG S ++ T W+++A MN
Sbjct: 181 TTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM 240
Query: 220 KRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ 257
R ++Y +GG +G SVE YN T ++
Sbjct: 241 CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 11/226 (4%)
Query: 40 RPRVPHEI--LFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNI 97
R R P + L + G VE YD + +RW ++ ++ RA G + +
Sbjct: 7 RLRTPMNLPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA--GMVYMAGLV 64
Query: 98 YVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQN 157
+ +GGF+G+ + ++ V W +A M +R + AV ++YA+GG++G +
Sbjct: 65 FAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLS 124
Query: 158 SVEKYNYTENQWSLIAPMNCMIQNVTYN-----IYVIGGFD--GNEYYNSCRCFNAVTKV 210
SVE YN N+W +APMN +V +Y +GG+D + ++ C+NA T
Sbjct: 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNE 184
Query: 211 WKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTEN 256
W IA M+ +R V +++YA+GG++G + SVE Y+ T N
Sbjct: 185 WTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTN 230
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 12/195 (6%)
Query: 43 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPR-AYHGTAVIGYNIYVIG 101
V + +L+A+GG+ G + VE Y+ +++ W V PM R + G V+G +Y +G
Sbjct: 106 VLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF---HVAPMNTRRSSVGVGVVGGLLYAVG 162
Query: 102 GFD--GNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSV 159
G+D + ++ C+NA T W IA M+ +R V +++YA+GG++G + SV
Sbjct: 163 GYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSV 222
Query: 160 EKYNYTENQWSLIAPMNCMIQN-----VTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 214
E Y+ T N W +A MN +N V +YV+GG DG+ S +N T W +
Sbjct: 223 EVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVV 282
Query: 215 AP-MNFKRCYVSTAV 228
+ M+ R Y V
Sbjct: 283 SSCMSTGRSYAGVTV 297
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 158 SVEKYNYTENQWSLIAPM---NCMIQNVTYN--IYVIGGFDGNEYYNSCRCFNAVTKVWK 212
SVE Y++ E +W +A + C V ++ +GGF+G+ + ++ V W
Sbjct: 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWT 90
Query: 213 EIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ 257
+A M +R + AV ++YA+GG++G +SVE YN N+
Sbjct: 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNE 135
>pdb|3II7|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl7
Length = 306
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 8/222 (3%)
Query: 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFD-G 519
+++ +GG S P ++ Y+ D W ++ P PR IY GG + G
Sbjct: 57 VVYILGG-SQLFPIKRMDCYNVVKDSW--YSKLGPPTPRDSLAACAAEGKIYTSGGSEVG 113
Query: 520 NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQ----RRQNSVEK 575
N C++ T+ W M +RC +IY GG G R NS E
Sbjct: 114 NSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEV 173
Query: 576 YNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP 635
Y+ W+ + PM R + ++ KI+ GG NG L++ E YD + N+W ++ P
Sbjct: 174 YDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP 233
Query: 636 MRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTW 677
M + V C A +YV+ GF G+ R+ + +YN T W
Sbjct: 234 MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKW 275
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 110/239 (46%), Gaps = 10/239 (4%)
Query: 512 YVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQN 571
Y I F G++ SCR FN W +I KR + +V+Y +GG
Sbjct: 13 YRIALFGGSQP-QSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIK 70
Query: 572 SVEKYNYTENQW-SLIAPMNVERSDASATTLQGKIYITGGFN-GHNCLNSCEVYDPECNQ 629
++ YN ++ W S + P R +A +GKIY +GG G++ L E YD
Sbjct: 71 RMDCYNVVKDSWYSKLGP-PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES 129
Query: 630 WTLIEPMRHRRSGVSCIAYHECIYVIGGFNG---MSRMCNG-EKYNPVTKTWSQVPDMYN 685
W M +R + + IYV GG G R+ N E Y+P T+TW+++ M
Sbjct: 130 WHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIE 189
Query: 686 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMG 744
R N + + D IFA+GG NG+ + +VE YD K +EW + M ++ C +G
Sbjct: 190 ARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP-WKGVTVKCAAVG 247
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 12/239 (5%)
Query: 511 IYVIGGFDGNEYYNSCR--CFNAVTKVW-KEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQ 567
+Y++GG ++ + R C+N V W ++ P + + A + + G G
Sbjct: 58 VYILGG---SQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGN 114
Query: 568 RRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNC----LNSCEVY 623
E Y+ W M +R G IY+ GG G+N LNSCEVY
Sbjct: 115 SALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVY 174
Query: 624 DPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM 683
DP WT + PM R + + I+ +GG NG+ + N E Y+ W V M
Sbjct: 175 DPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM 234
Query: 684 YNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 742
+ +++ + GF GV + H+ Y+ +TD+W + + + +++C+I
Sbjct: 235 PWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAF--PVTSCLI 291
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 8/196 (4%)
Query: 448 PTP--EIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTA 505
PTP +A +I + G G S E YDTR + W + + R HG
Sbjct: 89 PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM--LTQRCSHGMV 146
Query: 506 VIGYNIYVIGGFDGN----EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAM 561
IYV GG GN NSC ++ T+ W E+ PM R +D I+A+
Sbjct: 147 EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAV 206
Query: 562 GGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCE 621
GG NG ++VE Y+ N+W +++PM + + +Y+ GF G L
Sbjct: 207 GGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHIL 266
Query: 622 VYDPECNQWTLIEPMR 637
Y+ E ++W +R
Sbjct: 267 EYNTETDKWVANSKVR 282
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 12/220 (5%)
Query: 1 YVNGKSAKLDHGKIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPT 60
Y+ G S +++ + + D +++ P +A +I + G G S
Sbjct: 59 YILGGSQLFPIKRMDCYNVVKD-SWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSAL 117
Query: 61 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGN----EYYNSCRCFN 116
E YDTR + W + + R HG IYV GG GN NSC ++
Sbjct: 118 YLFECYDTRTESWHTKPSM--LTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYD 175
Query: 117 AVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM- 175
T+ W E+ PM R +D I+A+GG NG ++VE Y+ N+W +++PM
Sbjct: 176 PATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP 235
Query: 176 ----NCMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVW 211
V +YV+ GF G +N T W
Sbjct: 236 WKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKW 275
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 14/229 (6%)
Query: 47 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFD-G 105
+++ +GG S P ++ Y+ D W ++ P PR IY GG + G
Sbjct: 57 VVYILGG-SQLFPIKRMDCYNVVKDSW--YSKLGPPTPRDSLAACAAEGKIYTSGGSEVG 113
Query: 106 NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQ----RRQNSVEK 161
N C++ T+ W M +RC +IY GG G R NS E
Sbjct: 114 NSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEV 173
Query: 162 YNYTENQWSLIAPM-----NCMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP 216
Y+ W+ + PM N + V I+ +GG +G ++ ++ WK ++P
Sbjct: 174 YDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP 233
Query: 217 MNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKL 265
M +K V A ++Y + G+ G R + +YN TE + K+
Sbjct: 234 MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYN-TETDKWVANSKV 281
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 77/219 (35%), Gaps = 57/219 (26%)
Query: 98 YVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGG-------- 149
Y I F G++ SCR FN W +I KR + +V+Y +GG
Sbjct: 13 YRIALFGGSQP-QSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKR 71
Query: 150 ---YN--------------------------------GQRRQNSV----EKYNYTENQWS 170
YN G NS E Y+ W
Sbjct: 72 MDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH 131
Query: 171 LIAPM---NCMIQNVTYN--IYVIGGFDGN----EYYNSCRCFNAVTKVWKEIAPMNFKR 221
M C V N IYV GG GN NSC ++ T+ W E+ PM R
Sbjct: 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR 191
Query: 222 CYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKI 260
+D I+A+GG NG ++VE Y+ N+ K+
Sbjct: 192 KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM 230
>pdb|4ASC|A Chain A, Crystal Structure Of The Kelch Domain Of Human Kbtbd5
Length = 315
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 480 YDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGF---DGNEYYNSCRCFNAVTKVW 536
+D W+ + + PR G +IYV+GG DG +S C++ ++ W
Sbjct: 72 FDHLDSEWLGMPPLP--SPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKW 129
Query: 537 KEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRR-QNSVEKYNYTENQWSLIAPMNVERSD 595
E P+ + + H D++Y +GG R+ N + Y+ + +W +APM RS
Sbjct: 130 GESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSL 189
Query: 596 ASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVI 655
AT G+I + G +S EVY N+W E RS +S ++ +Y I
Sbjct: 190 FGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAI 249
Query: 656 GGFNGM---------SRMCNGEKYNPVTKTWSQV 680
GGF + + + + +YN K W V
Sbjct: 250 GGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 12/208 (5%)
Query: 548 YVSTAVHQDVIYAMGG--YNGQRRQNSVEKY----NYTENQWSLIAPMNVERSDASATTL 601
+VS ++ ++ GG YN +++ + Y ++ +++W + P+ R
Sbjct: 38 HVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA 97
Query: 602 QGKIYITGGF---NGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGF 658
IY+ GG +G CL+S YD +W +P+ + G + +++ + +YVIGG
Sbjct: 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGG- 156
Query: 659 NGMSRMCNGEK--YNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVEC 716
G R C + Y+P W ++ M RS F V D I G E
Sbjct: 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEV 216
Query: 717 YDEKTDEWYEATDMNIYRSALSACVIMG 744
Y ++W RS+LS ++G
Sbjct: 217 YSITDNKWAPFEAFPQERSSLSLVSLVG 244
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 4/186 (2%)
Query: 529 FNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGG---YNGQRRQNSVEKYNYTENQWSL 585
F+ + W + P+ RC + IY +GG +G+R +SV Y+ +W
Sbjct: 72 FDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE 131
Query: 586 IAPMNVERSDASATTLQGKIYITGGFNG-HNCLNSCEVYDPECNQWTLIEPMRHRRSGVS 644
P+ + + +Y+ GG CLN VYDP+ +W + PM+ RS
Sbjct: 132 SDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFG 191
Query: 645 CIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGG 704
+ I V G + E Y+ W+ RS+ ++ + ++AIGG
Sbjct: 192 ATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGG 251
Query: 705 FNGVTT 710
F + T
Sbjct: 252 FATLET 257
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYN--IYVIGGFDGNEYYNSCRCFNAV 532
D V YD + +W + DP+ P +G V+ + +YVIGG + + C
Sbjct: 117 DSVMCYDRLSFKW---GESDPL-PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172
Query: 533 TKV-WKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNV 591
K WKE+APM R VH I G +S E Y+ T+N+W+
Sbjct: 173 KKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ 232
Query: 592 ERSDASATTLQGKIYITGGF 611
ERS S +L G +Y GGF
Sbjct: 233 ERSSLSLVSLVGTLYAIGGF 252
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 61 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYN--IYVIGGFDGNEYYNSCRCFNAV 118
D V YD + +W + DP+ P +G V+ + +YVIGG + + C
Sbjct: 117 DSVMCYDRLSFKW---GESDPL-PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172
Query: 119 TKV-WKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNC 177
K WKE+APM R VH I G +S E Y+ T+N+W AP
Sbjct: 173 KKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKW---APFEA 229
Query: 178 MIQ--------NVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 212
Q ++ +Y IGGF E + + +W+
Sbjct: 230 FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWR 272
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 9/152 (5%)
Query: 115 FNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGG---YNGQRRQNSVEKYNYTENQWSL 171
F+ + W + P+ RC + IY +GG +G+R +SV Y+ +W
Sbjct: 72 FDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE 131
Query: 172 IAPMNCMIQNVTYN-----IYVIGGFDGNEYYNSCRCFNAVTKV-WKEIAPMNFKRCYVS 225
P+ ++ T +YVIGG + + C K WKE+APM R
Sbjct: 132 SDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFG 191
Query: 226 TAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ 257
VH I G +S E Y+ T+N+
Sbjct: 192 ATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223
>pdb|2WOZ|A Chain A, The Novel Beta-Propeller Of The Btb-Kelch Protein Krp1
Provides The Binding Site For Lasp-1 That Is Necessary
For Pseudopodia Extension
Length = 318
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 5/181 (2%)
Query: 481 DTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFD--GNEYYNSCRCFNAVTKVWKE 538
D + WV + + R G + IYV+ G D +S C++ V W E
Sbjct: 84 DNVSSEWVGLPPLP--SARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE 141
Query: 539 IAPMNFKRCYVSTAVHQDVIYAMGGYNGQRR-QNSVEKYNYTENQWSLIAPMNVERSDAS 597
+ + K + H +IY +GG ++ N V YN + W +APM RS
Sbjct: 142 VKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFG 201
Query: 598 ATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGG 657
+GKI I GG S E +D + N+W ++ RS +S ++ +Y IGG
Sbjct: 202 VAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGG 261
Query: 658 F 658
F
Sbjct: 262 F 262
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 18/186 (9%)
Query: 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYN--IYVIGG-FDGNEYYNSCRCFNA 531
D V YD A +W ++ + P +G VI +N IY +GG D + N +N
Sbjct: 127 DSVLCYDPVAAKWSEVKNL----PIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182
Query: 532 VTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNV 591
WK++APM R A+H+ I GG SVE ++ N+W ++
Sbjct: 183 KKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ 242
Query: 592 ERSDASATTLQGKIYITGGFN---------GHNCLNSCEVYDPECNQWT-LIEPMRHRRS 641
ERS S +L G +Y GGF +N Y+ + +W +++ +R+ S
Sbjct: 243 ERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLKEIRY-AS 301
Query: 642 GVSCIA 647
G SC+A
Sbjct: 302 GASCLA 307
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 9/208 (4%)
Query: 546 RCYVSTAVHQDVIYAMGGY--NGQRRQNSVEKYNY----TENQWSLIAPMNVERSDASAT 599
R + S Q+ +Y +GG + + + ++ Y + ++W + P+ R
Sbjct: 47 RNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLG 106
Query: 600 TLQGKIYITGG--FNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGG 657
+ KIY+ G L+S YDP +W+ ++ + + G + I+++ IY +GG
Sbjct: 107 EVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGG 166
Query: 658 FNGMSRMCNGE-KYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVEC 716
+ N YNP W + M PRS F + + I GG VE
Sbjct: 167 KTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEA 226
Query: 717 YDEKTDEWYEATDMNIYRSALSACVIMG 744
+D KT++W T+ RS++S + G
Sbjct: 227 FDLKTNKWEVMTEFPQERSSISLVSLAG 254
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 96/245 (39%), Gaps = 18/245 (7%)
Query: 498 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRC------FNAVTKVWKEIAPMNFKRCYVST 551
PR + +YV+GG +E + V+ W + P+ RC
Sbjct: 46 PRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGL 105
Query: 552 AVHQDVIYAMGGYNGQRRQ--NSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITG 609
D IY + G + Q +SV Y+ +WS + + ++ + + G IY G
Sbjct: 106 GEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLG 165
Query: 610 G-FNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGE 668
G + C N +Y+P+ W + PM+ RS + I + GG + E
Sbjct: 166 GKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVE 225
Query: 669 KYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGV---------TTIYHVECYDE 719
++ T W + + RS+ ++ + ++AIGGF + T + + Y++
Sbjct: 226 AFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYED 285
Query: 720 KTDEW 724
EW
Sbjct: 286 DKKEW 290
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 61 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYN--IYVIGG-FDGNEYYNSCRCFNA 117
D V YD A +W ++ + P +G VI +N IY +GG D + N +N
Sbjct: 127 DSVLCYDPVAAKWSEVKNL----PIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182
Query: 118 VTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM-- 175
WK++APM R A+H+ I GG SVE ++ N+W ++
Sbjct: 183 KKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ 242
Query: 176 ---NCMIQNVTYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 212
+ + ++ ++Y IGGF + + V +WK
Sbjct: 243 ERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWK 282
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 87/220 (39%), Gaps = 15/220 (6%)
Query: 84 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRC------FNAVTKVWKEIAPMNFKRCYVST 137
PR + +YV+GG +E + V+ W + P+ RC
Sbjct: 46 PRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGL 105
Query: 138 AVHQDVIYAMGGYNGQRRQ--NSVEKYNYTENQWSLIA--PMNCMIQNVTYN---IYVIG 190
D IY + G + Q +SV Y+ +WS + P+ NV + IY +G
Sbjct: 106 GEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLG 165
Query: 191 G-FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVE 249
G D + N +N WK++APM R A+H+ I GG SVE
Sbjct: 166 GKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVE 225
Query: 250 KYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCM 289
++ N+ ++ + ER I+ ++A L A F M
Sbjct: 226 AFDLKTNKWEVMTEFPQERS-SISLVSLAGSLYAIGGFAM 264
>pdb|3HVE|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
Gigaxoninbtb3-Box
Length = 256
Score = 65.9 bits (159), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 265 LFERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKL 324
+F ++ + ED + ++ A D ++ + LCC+F++ NC GI F+ + +
Sbjct: 92 IFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHV 151
Query: 325 EEWTRKYILRNFVDVARESEEIVFXXXXXXXXXXXXXXLNVKSEETVWELIIRWIDYDPE 384
+Y+ +F DV+ +EE + LNV +E V+E +IRWI +D E
Sbjct: 152 HYLATEYLETHFRDVS-STEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTE 210
Query: 385 NRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQS-TPECRPI 426
RK H + + + L++ + RE+ + P V+ EC I
Sbjct: 211 IRKVHXKDVXSALWVSGLDSSYLREQXLNEPLVREIVKECSNI 253
>pdb|4AP2|A Chain A, Crystal Structure Of The Human Klhl11-cul3 Complex At 2.8a
Resolution
pdb|4APF|A Chain A, Crystal Structure Of The Human Klhl11-cul3 Complex At 3.1a
Resolution
Length = 297
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Query: 269 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWT 328
++ ++ +V +L D F + + ++ C +F+K+ NC I + + +L
Sbjct: 122 RIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKA 181
Query: 329 RKYILRNFVDVARESEEIVFXXXXXXXXXXXXXXLNVKSEETVWELIIRWIDYDPENRKK 388
I RNF V ++ EE + V SEE ++E +++W+ + E R++
Sbjct: 182 ADMIRRNFHKVIQD-EEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERER 240
Query: 389 HIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPII 427
+ L K +RL ++ + VK V + C ++
Sbjct: 241 YFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLV 279
>pdb|3I3N|A Chain A, Crystal Structure Of The Btb-Back Domains Of Human Klhl11
pdb|3I3N|B Chain B, Crystal Structure Of The Btb-Back Domains Of Human Klhl11
Length = 279
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 1/159 (0%)
Query: 269 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWT 328
++ ++ +V +L D F + + ++ C +F+K+ NC I + + +L
Sbjct: 104 RIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHXYTLSQLALKA 163
Query: 329 RKYILRNFVDVARESEEIVFXXXXXXXXXXXXXXLNVKSEETVWELIIRWIDYDPENRKK 388
I RNF V ++ EE + V SEE ++E +++W+ + E R++
Sbjct: 164 ADXIRRNFHKVIQD-EEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERER 222
Query: 389 HIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPII 427
+ L K +RL + + VK V + C ++
Sbjct: 223 YFEELFKLLRLSQXKPTYLTRHVKPERLVANNEVCVKLV 261
>pdb|2WQ8|A Chain A, Glycan Labelling Using Engineered Variants Of Galactose
Oxidase Obtained By Directed Evolution
Length = 661
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 603 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHEC-IYVIGG-FNG 660
G+I +TGG N +YD + W M+ R S + ++ IGG F+G
Sbjct: 259 GQIVVTGG----NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSFSG 314
Query: 661 MSRMCNGEKYNPVTKTWSQVPD 682
NGE Y+P +KTW+ +P+
Sbjct: 315 GVFEKNGEVYSPSSKTWTSLPN 336
>pdb|2EIC|A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f
Length = 639
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 603 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHEC-IYVIGG-FNG 660
G+I +TGG N +YD + W M+ R S + ++ IGG F+G
Sbjct: 237 GQIVVTGG----NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSFSG 292
Query: 661 MSRMCNGEKYNPVTKTWSQVPD 682
NGE Y+P +KTW+ +P+
Sbjct: 293 GVFEKNGEVYSPSSKTWTSLPN 314
>pdb|1T2X|A Chain A, Glactose Oxidase C383s Mutant Identified By Directed
Evolution
Length = 639
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 603 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHEC-IYVIGG-FNG 660
G+I +TGG N +YD + W M+ R S + ++ IGG ++G
Sbjct: 237 GQIVVTGG----NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSG 292
Query: 661 MSRMCNGEKYNPVTKTWSQVPD 682
NGE Y+P +KTW+ +P+
Sbjct: 293 GVFEKNGEVYSPSSKTWTSLPN 314
>pdb|1K3I|A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase
Length = 656
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 603 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHEC-IYVIGG-FNG 660
G+I +TGG N +YD + W M+ R S + ++ IGG ++G
Sbjct: 254 GQIVVTGG----NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSG 309
Query: 661 MSRMCNGEKYNPVTKTWSQVPD 682
NGE Y+P +KTW+ +P+
Sbjct: 310 GVFEKNGEVYSPSSKTWTSLPN 331
>pdb|2EIE|A Chain A, Crystal Structure Of Galactose Oxidase Complexed With
Azide
pdb|1GOF|A Chain A, Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal
Structure Of Galactose Oxidase
pdb|1GOG|A Chain A, Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal
Structure Of Galactose Oxidase
pdb|1GOH|A Chain A, Novel Thioether Bond Revealed By A 1.7 Angstroms Crystal
Structure Of Galactose Oxidase
pdb|2JKX|A Chain A, Galactose Oxidase. Matgo. Copper Free, Expressed In Pichia
Pastoris.
pdb|2VZ1|A Chain A, Premat-Galactose Oxidase
pdb|2VZ3|A Chain A, Bleached Galactose Oxidase
Length = 639
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 603 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHEC-IYVIGG-FNG 660
G+I +TGG N +YD + W M+ R S + ++ IGG ++G
Sbjct: 237 GQIVVTGG----NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSG 292
Query: 661 MSRMCNGEKYNPVTKTWSQVPD 682
NGE Y+P +KTW+ +P+
Sbjct: 293 GVFEKNGEVYSPSSKTWTSLPN 314
>pdb|2EIB|A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant
Length = 639
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 603 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHEC-IYVIGG-FNG 660
G+I +TGG N +YD + W M+ R S + ++ IGG +G
Sbjct: 237 GQIVVTGG----NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSHSG 292
Query: 661 MSRMCNGEKYNPVTKTWSQVPD 682
NGE Y+P +KTW+ +P+
Sbjct: 293 GVFEKNGEVYSPSSKTWTSLPN 314
>pdb|2EID|A Chain A, Galactose Oxidase W290g Mutant
Length = 639
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 603 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHEC-IYVIGGF-NG 660
G+I +TGG N +YD + W M+ R S + ++ IGG +G
Sbjct: 237 GQIVVTGG----NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSGSG 292
Query: 661 MSRMCNGEKYNPVTKTWSQVPD 682
NGE Y+P +KTW+ +P+
Sbjct: 293 GVFEKNGEVYSPSSKTWTSLPN 314
>pdb|2UVK|A Chain A, Structure Of Yjht
pdb|2UVK|B Chain B, Structure Of Yjht
Length = 357
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 93/250 (37%), Gaps = 44/250 (17%)
Query: 481 DTRAD--RWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGN-----EYYNSCRCFNAVT 533
DT+A +W + P GPR +A I N+YV GG N + +N +N T
Sbjct: 37 DTQAKDKKWTALAAF-PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95
Query: 534 KVWKEI---APMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN 590
W ++ AP T VH Y GG N E N + I +N
Sbjct: 96 NSWVKLXSHAPXGXAGHV--TFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153
Query: 591 VERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPMRHRRSGVSCIAYH 649
D A + Y F +DP QW+ E + +G + +
Sbjct: 154 AHYFDKKA-----EDYFFNKF--------LLSFDPSTQQWSYAGESPWYGTAGAAVVNKG 200
Query: 650 ECIYVIGGFNGMSRMCNGEKYNPVTK--------TWSQVPDMYNP---RSNFAIEVIDDM 698
+ ++I NG ++ G + + V + W+++ + +P FA D +
Sbjct: 201 DKTWLI---NGEAKP--GLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSL 255
Query: 699 IFAIG-GFNG 707
IFA G GF G
Sbjct: 256 IFAGGAGFKG 265
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 67 DTRAD--RWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGN-----EYYNSCRCFNAVT 119
DT+A +W + P GPR +A I N+YV GG N + +N +N T
Sbjct: 37 DTQAKDKKWTALAAF-PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95
Query: 120 KVWKEI---APMNFKRCYVSTAVHQDVIYAMGGYN 151
W ++ AP T VH Y GG N
Sbjct: 96 NSWVKLXSHAPXGXAGHV--TFVHNGKAYVTGGVN 128
>pdb|3GEA|A Chain A, Donor Strand Complemented Faeg Monomer Of F4 Variant Ad
pdb|3GEA|B Chain B, Donor Strand Complemented Faeg Monomer Of F4 Variant Ad
Length = 274
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 557 VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG 613
V YA+G NGQ + + + T QWS AP+NV A T +TG FNG
Sbjct: 216 VAYALGIANGQTIEATFNQAVTTSTQWS--APLNV------AITYYDNKQMTGDFNG 264
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 143 VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNCMIQNVTY--NIYVIGGFDGN 195
V YA+G NGQ + + + T QWS AP+N I TY N + G F+G+
Sbjct: 216 VAYALGIANGQTIEATFNQAVTTSTQWS--APLNVAI---TYYDNKQMTGDFNGS 265
>pdb|3HVE|B Chain B, Structures Of Spop-Substrate Complexes: Insights Into
Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases:
Gigaxoninbtb3-Box
Length = 256
Score = 32.7 bits (73), Expect = 0.77, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 265 LFERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKL 324
+F ++ + ED + ++ A D ++ + LCC+F++ NC GI F+ + +
Sbjct: 92 IFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHV 151
Query: 325 EEWTRKYILRNFVDV 339
+Y+ +F DV
Sbjct: 152 HYLATEYLETHFRDV 166
>pdb|1SQH|A Chain A, X-Ray Structure Of Drosophila Malonogaster Protein Q9vr51
Northeast Structural Genomics Consortium Target Fr87
Length = 312
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 218 NFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNV 277
NF+ ++H+D++ ++ ++ Q + E + E IE +
Sbjct: 75 NFRTWGTYVSLHRDIVQSVSFFSWQP-DGAAELWECLEQTQLIEWTQ------------- 120
Query: 278 ASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 336
+LL D ++ ++L PR CFG +L D FC K+ + ++ +R
Sbjct: 121 GALLTNVDLGFCNRVKELAVSRGVTAIQPRQCFGXVLSHEDAFCAKVPDLPSEFEIRRL 179
>pdb|1CXV|A Chain A, Structure Of Recombinant Mouse Collagenase-3 (Mmp-13)
pdb|1CXV|B Chain B, Structure Of Recombinant Mouse Collagenase-3 (Mmp-13)
Length = 164
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 113 RCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMG 148
+ F KVW ++ P+NF R Y TA D++ + G
Sbjct: 33 KAFRKAFKVWSDVTPLNFTRIYDGTA---DIMISFG 65
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 202 RCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMG 237
+ F KVW ++ P+NF R Y TA D++ + G
Sbjct: 33 KAFRKAFKVWSDVTPLNFTRIYDGTA---DIMISFG 65
Score = 31.2 bits (69), Expect = 2.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 527 RCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMG 562
+ F KVW ++ P+NF R Y TA D++ + G
Sbjct: 33 KAFRKAFKVWSDVTPLNFTRIYDGTA---DIMISFG 65
>pdb|2LAH|A Chain A, Solution Nmr Structure Of Mitotic Checkpoint
SerineTHREONINE-Protein Kinase Bub1 N-Terminal Domain
From Homo Sapiens, Northeast Structural Genomics
Consortium Target Hr5460a (Methods Development)
Length = 160
Score = 29.6 bits (65), Expect = 7.0, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 372 WELIIRWIDYD-PENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIET 430
WE I+W++ + PEN K+++++L++++ L+ + + + Y E + +
Sbjct: 37 WERYIQWVEENFPEN-KEYLITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYNSDLHQF 95
Query: 431 FKFLYD 436
F+FLY+
Sbjct: 96 FEFLYN 101
>pdb|3LQB|A Chain A, Crystal Structure Of The Hatching Enzyme Zhe1 From The
Zebrafish Danio Rerio
Length = 199
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 114 CFNAVTKVW-KEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 172
C++A+ + K++ +N K C S ++ +A+G Y+ Q R ++ Y W+ I
Sbjct: 71 CYSAIGRTGGKQVVSLNRKGCVYSGIAQHELNHALGFYHEQSRS---DRDQYVRINWNNI 127
Query: 173 AP 174
+P
Sbjct: 128 SP 129
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 528 CFNAVTKVW-KEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586
C++A+ + K++ +N K C S ++ +A+G Y+ Q R ++ Y W+ I
Sbjct: 71 CYSAIGRTGGKQVVSLNRKGCVYSGIAQHELNHALGFYHEQSRS---DRDQYVRINWNNI 127
Query: 587 AP 588
+P
Sbjct: 128 SP 129
>pdb|4A1G|A Chain A, The Crystal Structure Of The Human Bub1 Tpr Domain In
Complex With The Ki Motif Of Knl1
pdb|4A1G|B Chain B, The Crystal Structure Of The Human Bub1 Tpr Domain In
Complex With The Ki Motif Of Knl1
pdb|4A1G|C Chain C, The Crystal Structure Of The Human Bub1 Tpr Domain In
Complex With The Ki Motif Of Knl1
pdb|4A1G|D Chain D, The Crystal Structure Of The Human Bub1 Tpr Domain In
Complex With The Ki Motif Of Knl1
Length = 152
Score = 29.6 bits (65), Expect = 7.3, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 372 WELIIRWIDYD-PENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIET 430
WE I+W++ + PEN K+++++L++++ L+ + + + Y E + +
Sbjct: 29 WERYIQWVEENFPEN-KEYLITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYNSDLHQF 87
Query: 431 FKFLYD 436
F+FLY+
Sbjct: 88 FEFLYN 93
>pdb|3GGH|A Chain A, Donor Strand Complemented Faeg Of F4ad Fimbriae
pdb|3GGH|B Chain B, Donor Strand Complemented Faeg Of F4ad Fimbriae
Length = 275
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 513 VIGGFDGNEYYNSCRCFNA-VTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQN 571
+ G N+ + NA +T + N Y +V V YA+G NGQ +
Sbjct: 173 LFGSLSKNDILGQIQRVNANITSLVNVPGSFNENMAYTDGSV-VSVAYALGIANGQTIEA 231
Query: 572 SVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGH 614
+ + T QWS AP+NV A T +TG FNG
Sbjct: 232 TFNQAVTTSTQWS--APLNV------AITYYDNKQMTGDFNGS 266
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,632,339
Number of Sequences: 62578
Number of extensions: 1162876
Number of successful extensions: 2738
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2352
Number of HSP's gapped (non-prelim): 155
length of query: 824
length of database: 14,973,337
effective HSP length: 107
effective length of query: 717
effective length of database: 8,277,491
effective search space: 5934961047
effective search space used: 5934961047
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)