Query psy17309
Match_columns 824
No_of_seqs 641 out of 4165
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 18:43:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 4.6E-47 1.6E-51 403.4 38.3 292 452-746 5-302 (302)
2 3ii7_A Kelch-like protein 7; p 100.0 9.8E-47 3.4E-51 401.7 36.8 287 453-745 4-296 (306)
3 2vpj_A Kelch-like protein 12; 100.0 1.6E-46 5.4E-51 399.2 37.2 290 452-743 6-300 (301)
4 1zgk_A Kelch-like ECH-associat 100.0 1.5E-46 5.3E-51 400.3 37.0 282 458-742 23-308 (308)
5 1zgk_A Kelch-like ECH-associat 100.0 7.8E-47 2.7E-51 402.6 34.1 198 498-695 111-308 (308)
6 2xn4_A Kelch-like protein 2; s 100.0 2.4E-45 8.2E-50 390.2 39.5 202 498-699 98-302 (302)
7 4asc_A Kelch repeat and BTB do 100.0 2.6E-45 8.8E-50 392.3 32.9 281 460-750 5-304 (315)
8 3ii7_A Kelch-like protein 7; p 100.0 4.8E-45 1.6E-49 388.6 34.2 287 38-650 3-295 (306)
9 2vpj_A Kelch-like protein 12; 100.0 6.7E-45 2.3E-49 386.6 34.8 290 38-649 6-300 (301)
10 2woz_A Kelch repeat and BTB do 100.0 1.6E-44 5.3E-49 386.8 32.7 287 453-749 6-313 (318)
11 4asc_A Kelch repeat and BTB do 100.0 9.1E-44 3.1E-48 380.3 28.3 282 46-657 5-305 (315)
12 2woz_A Kelch repeat and BTB do 100.0 7.3E-43 2.5E-47 373.8 30.3 289 38-656 5-314 (318)
13 2uvk_A YJHT; unknown function, 100.0 5.2E-39 1.8E-43 350.0 28.7 260 492-755 3-328 (357)
14 2uvk_A YJHT; unknown function, 100.0 5.1E-38 1.7E-42 342.1 30.7 269 459-733 19-354 (357)
15 1k3i_A Galactose oxidase precu 100.0 1.8E-36 6E-41 356.4 26.1 222 498-720 286-548 (656)
16 2zwa_A Leucine carboxyl methyl 100.0 2.6E-37 8.9E-42 363.1 16.9 319 378-752 315-674 (695)
17 2zwa_A Leucine carboxyl methyl 100.0 3.1E-33 1.1E-37 328.4 26.0 259 459-721 397-694 (695)
18 1k3i_A Galactose oxidase precu 100.0 9.7E-34 3.3E-38 333.1 20.0 287 459-752 197-530 (656)
19 3i3n_A Kelch-like protein 11; 100.0 1.6E-32 5.4E-37 286.0 11.8 218 218-436 46-270 (279)
20 3hve_A Gigaxonin; ubiquitin, c 100.0 2.9E-32 9.8E-37 280.4 1.5 210 218-428 42-255 (256)
21 2eqx_A Kelch repeat and BTB do 99.7 1.6E-18 5.5E-23 149.7 6.9 96 300-399 4-99 (105)
22 3htm_A Speckle-type POZ protei 99.6 7E-17 2.4E-21 155.0 3.2 123 219-341 46-169 (172)
23 3hqi_A Speckle-type POZ protei 99.5 2E-15 6.7E-20 159.7 2.9 123 218-340 185-308 (312)
24 4eoz_A Speckle-type POZ protei 99.4 9.7E-15 3.3E-19 135.5 -3.6 108 219-326 37-145 (145)
25 2vkp_A BTB/POZ domain-containi 99.0 1.3E-11 4.4E-16 108.0 -0.9 86 218-304 23-109 (109)
26 3m5b_A Zinc finger and BTB dom 99.0 2.8E-11 9.7E-16 106.9 0.4 77 225-302 41-117 (119)
27 2if5_A Zinc finger and BTB dom 99.0 3.8E-11 1.3E-15 107.0 -1.0 84 218-301 36-120 (120)
28 2z8h_A Transcription regulator 99.0 3.3E-11 1.1E-15 110.1 -1.7 89 218-308 47-137 (138)
29 1r29_A B-cell lymphoma 6 prote 98.9 6.6E-11 2.3E-15 106.5 -0.8 85 218-303 40-126 (127)
30 2yy9_A Zinc finger and BTB dom 98.9 5.2E-11 1.8E-15 108.2 -2.8 85 219-307 37-122 (135)
31 3b84_A Zinc finger and BTB dom 98.9 7.8E-11 2.7E-15 104.6 -2.3 81 219-303 36-117 (119)
32 2ppi_A Gigaxonin; BTB domain, 98.9 1E-10 3.5E-15 107.5 -2.8 84 218-301 58-144 (144)
33 1buo_A POZ domain, protein (pr 98.9 2.8E-10 9.7E-15 101.3 0.0 82 219-304 40-121 (121)
34 2vpk_A Myoneurin; transcriptio 98.8 2.1E-10 7.4E-15 101.3 -1.4 80 219-302 34-116 (116)
35 2q81_A MIZ-1 protein; BTB/POZ 98.8 3.7E-10 1.3E-14 100.1 -2.6 78 220-301 40-117 (119)
36 3ga1_A Nucleus accumbens-assoc 98.7 1.9E-10 6.6E-15 103.7 -5.3 83 219-304 45-128 (129)
37 3ohu_A Transcription regulator 98.7 1.5E-10 5.2E-15 103.8 -7.3 80 219-300 44-125 (125)
38 2ihc_A Transcription regulator 98.6 2.8E-10 9.6E-15 101.8 -7.3 81 219-301 41-123 (124)
39 3dsm_A Uncharacterized protein 98.4 0.00035 1.2E-08 73.7 31.0 226 473-725 15-257 (328)
40 2ast_A S-phase kinase-associat 98.3 5.6E-08 1.9E-12 90.4 0.1 86 227-312 20-134 (159)
41 3fkc_A Transcriptional regulat 98.3 4.4E-08 1.5E-12 86.0 -1.4 72 219-294 43-115 (116)
42 3mbr_X Glutamine cyclotransfer 98.1 0.0014 4.9E-08 64.6 24.8 184 500-704 22-223 (243)
43 3dsm_A Uncharacterized protein 97.9 0.0025 8.5E-08 67.0 25.6 223 474-721 63-302 (328)
44 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.015 5E-07 62.2 31.6 249 455-749 49-324 (376)
45 3nol_A Glutamine cyclotransfer 97.8 0.0034 1.2E-07 62.5 22.5 182 502-704 46-244 (262)
46 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.012 4.3E-07 62.8 28.6 231 475-749 113-365 (376)
47 3mbr_X Glutamine cyclotransfer 97.7 0.0024 8.2E-08 63.0 19.4 157 547-724 22-182 (243)
48 1fs1_B SKP1, cyclin A/CDK2-ass 97.6 2.3E-05 7.8E-10 70.9 3.4 83 227-312 21-129 (141)
49 2p1m_A SKP1-like protein 1A; F 97.6 1.6E-05 5.5E-10 73.6 1.4 88 227-316 23-140 (160)
50 3nok_A Glutaminyl cyclase; bet 97.4 0.011 3.7E-07 58.9 19.2 151 502-676 58-212 (268)
51 2iwa_A Glutamine cyclotransfer 97.4 0.035 1.2E-06 55.8 23.3 193 502-720 24-236 (266)
52 3nol_A Glutamine cyclotransfer 97.4 0.0056 1.9E-07 60.9 16.8 156 549-725 46-205 (262)
53 1l0q_A Surface layer protein; 97.3 0.0044 1.5E-07 66.5 17.4 225 461-724 3-236 (391)
54 1k8k_C P40, ARP2/3 complex 41 97.2 0.029 1E-06 59.3 22.3 242 460-733 20-288 (372)
55 3jrp_A Fusion protein of prote 97.2 0.023 8E-07 60.1 21.4 241 460-732 23-299 (379)
56 2z2n_A Virginiamycin B lyase; 97.2 0.26 8.8E-06 49.9 29.0 218 475-727 36-260 (299)
57 2iwa_A Glutamine cyclotransfer 97.1 0.042 1.4E-06 55.2 20.2 154 549-723 24-183 (266)
58 1l0q_A Surface layer protein; 97.1 0.0086 2.9E-07 64.2 16.0 184 509-725 2-193 (391)
59 3vgz_A Uncharacterized protein 97.0 0.12 4.2E-06 53.9 24.6 219 474-726 68-308 (353)
60 4ery_A WD repeat-containing pr 97.0 0.14 4.8E-06 52.6 24.6 227 460-723 35-270 (312)
61 2ovr_B FBW7, F-BOX/WD repeat p 97.0 0.14 4.7E-06 55.9 25.7 215 476-725 180-395 (445)
62 3jrp_A Fusion protein of prote 97.0 0.05 1.7E-06 57.5 21.2 190 508-722 22-241 (379)
63 2ovr_B FBW7, F-BOX/WD repeat p 97.0 0.13 4.5E-06 56.1 24.9 213 475-724 139-351 (445)
64 3nok_A Glutaminyl cyclase; bet 97.0 0.021 7.2E-07 56.8 16.1 152 549-724 58-213 (268)
65 2qc5_A Streptogramin B lactona 97.0 0.4 1.4E-05 48.5 27.8 217 475-727 41-265 (300)
66 2z2n_A Virginiamycin B lyase; 96.9 0.33 1.1E-05 49.1 25.7 212 475-722 78-296 (299)
67 4ajy_C Transcription elongatio 96.9 7E-05 2.4E-09 62.8 -2.3 63 227-289 21-97 (97)
68 1p22_A F-BOX/WD-repeat protein 96.8 0.042 1.4E-06 59.9 19.3 215 476-726 194-419 (435)
69 3bws_A Protein LP49; two-domai 96.8 0.033 1.1E-06 60.5 18.3 223 476-725 102-338 (433)
70 3v9f_A Two-component system se 96.8 0.096 3.3E-06 62.1 23.6 239 476-749 384-644 (781)
71 1p22_A F-BOX/WD-repeat protein 96.8 0.043 1.5E-06 59.8 19.0 212 475-721 153-365 (435)
72 1q7f_A NHL, brain tumor CG1071 96.8 0.54 1.9E-05 47.3 29.6 219 475-720 51-279 (286)
73 1rwi_B Serine/threonine-protei 96.8 0.15 5E-06 51.1 21.5 212 475-721 46-264 (270)
74 3ow8_A WD repeat-containing pr 96.8 0.12 4.1E-06 53.7 21.3 184 508-723 91-281 (321)
75 4a2l_A BT_4663, two-component 96.7 0.18 6.3E-06 59.7 25.2 238 476-749 378-647 (795)
76 3sfz_A APAF-1, apoptotic pepti 96.7 0.63 2.2E-05 58.2 31.4 188 508-724 972-1161(1249)
77 1rwi_B Serine/threonine-protei 96.7 0.1 3.4E-06 52.3 19.7 193 502-724 27-225 (270)
78 1ri6_A Putative isomerase YBHE 96.7 0.2 6.9E-06 51.8 22.8 241 475-740 60-329 (343)
79 1q7f_A NHL, brain tumor CG1071 96.7 0.62 2.1E-05 46.9 25.9 194 508-727 40-244 (286)
80 1got_B GT-beta; complex (GTP-b 96.7 0.52 1.8E-05 49.1 25.7 215 475-722 77-302 (340)
81 2hqs_A Protein TOLB; TOLB, PAL 96.7 0.27 9.2E-06 53.2 23.9 228 475-728 159-394 (415)
82 3v7d_B Cell division control p 96.6 0.48 1.6E-05 51.7 26.3 218 475-726 183-426 (464)
83 3jro_A Fusion protein of prote 96.6 0.036 1.2E-06 65.5 17.9 241 460-731 21-296 (753)
84 2qc5_A Streptogramin B lactona 96.6 0.76 2.6E-05 46.3 26.4 193 503-727 24-223 (300)
85 3bws_A Protein LP49; two-domai 96.5 0.2 6.8E-06 54.2 21.9 241 459-726 133-395 (433)
86 3v9f_A Two-component system se 96.5 0.15 5.1E-06 60.4 22.1 210 475-721 427-656 (781)
87 3sfz_A APAF-1, apoptotic pepti 96.5 3 0.0001 52.0 38.4 139 46-209 627-775 (1249)
88 1kb0_A Quinohemoprotein alcoho 96.5 0.57 1.9E-05 54.2 26.3 119 504-634 73-208 (677)
89 1gxr_A ESG1, transducin-like e 96.5 0.19 6.5E-06 51.8 20.5 228 460-725 63-300 (337)
90 3v7d_B Cell division control p 96.4 0.63 2.2E-05 50.7 25.3 216 475-723 142-383 (464)
91 1k8k_C P40, ARP2/3 complex 41 96.4 0.078 2.7E-06 55.9 17.3 192 508-724 19-236 (372)
92 3scy_A Hypothetical bacterial 96.4 0.72 2.4E-05 48.3 24.8 249 460-731 13-303 (361)
93 4aez_A CDC20, WD repeat-contai 96.4 0.21 7.2E-06 53.5 20.9 226 460-723 146-382 (401)
94 3vgz_A Uncharacterized protein 96.4 1.1 3.9E-05 46.2 26.3 197 508-727 52-268 (353)
95 2ad6_A Methanol dehydrogenase 96.4 0.59 2E-05 52.8 25.2 119 504-633 58-193 (571)
96 3ow8_A WD repeat-containing pr 96.4 0.28 9.4E-06 50.9 21.0 210 475-719 102-319 (321)
97 3fm0_A Protein CIAO1; WDR39,SG 96.4 0.24 8.1E-06 51.9 20.6 180 460-659 28-215 (345)
98 3dwl_C Actin-related protein 2 96.4 0.065 2.2E-06 56.8 16.4 239 460-732 23-292 (377)
99 2hes_X YDR267CP; beta-propelle 96.4 0.24 8.2E-06 51.5 20.5 236 462-727 26-286 (330)
100 4ery_A WD repeat-containing pr 96.3 0.26 8.9E-06 50.5 20.4 185 508-724 34-226 (312)
101 4aez_A CDC20, WD repeat-contai 96.3 0.39 1.3E-05 51.4 22.6 221 475-728 113-343 (401)
102 3fm0_A Protein CIAO1; WDR39,SG 96.3 0.08 2.7E-06 55.7 16.5 180 508-707 27-216 (345)
103 2ynn_A Coatomer subunit beta'; 96.2 0.39 1.3E-05 49.2 21.1 224 460-724 25-262 (304)
104 2aq5_A Coronin-1A; WD40 repeat 96.2 0.51 1.7E-05 50.4 22.8 194 508-723 93-301 (402)
105 2ojh_A Uncharacterized protein 96.2 1 3.5E-05 44.9 23.9 229 473-727 20-264 (297)
106 3mkq_A Coatomer beta'-subunit; 96.2 0.17 6E-06 59.9 20.6 227 460-724 25-262 (814)
107 1gxr_A ESG1, transducin-like e 96.2 0.34 1.1E-05 49.9 20.5 213 461-707 110-328 (337)
108 3vl1_A 26S proteasome regulato 96.2 0.96 3.3E-05 48.3 24.8 225 460-721 109-365 (420)
109 1kv9_A Type II quinohemoprotei 96.1 1.3 4.4E-05 51.1 26.4 118 504-633 62-195 (668)
110 3vl1_A 26S proteasome regulato 96.1 1.3 4.4E-05 47.3 25.1 187 508-723 108-324 (420)
111 4a2l_A BT_4663, two-component 96.0 0.89 3E-05 53.8 25.5 210 475-721 427-659 (795)
112 3no2_A Uncharacterized protein 96.0 1.5 5.1E-05 44.2 27.1 207 460-703 5-230 (276)
113 4g56_B MGC81050 protein; prote 96.0 0.11 3.9E-06 54.8 16.0 184 508-721 150-343 (357)
114 2pm7_B Protein transport prote 96.0 0.53 1.8E-05 47.9 20.6 196 509-730 67-295 (297)
115 3dwl_C Actin-related protein 2 96.0 0.023 8E-07 60.4 10.5 190 508-723 22-238 (377)
116 1yiq_A Quinohemoprotein alcoho 96.0 1.3 4.4E-05 51.4 25.9 118 504-633 66-200 (689)
117 2pbi_B Guanine nucleotide-bind 95.9 0.94 3.2E-05 47.5 22.7 226 461-723 77-317 (354)
118 4gqb_B Methylosome protein 50; 95.9 0.21 7.2E-06 52.4 17.3 215 475-721 103-331 (344)
119 1vyh_C Platelet-activating fac 95.9 0.36 1.2E-05 52.0 19.5 221 461-722 121-370 (410)
120 2ad6_A Methanol dehydrogenase 95.8 3.3 0.00011 46.7 30.1 119 455-586 58-193 (571)
121 1got_B GT-beta; complex (GTP-b 95.8 1.3 4.4E-05 46.0 23.1 185 508-723 66-259 (340)
122 1pjx_A Dfpase, DIISOPROPYLFLUO 95.8 0.53 1.8E-05 48.1 19.8 220 475-722 46-300 (314)
123 3u4y_A Uncharacterized protein 95.8 0.25 8.7E-06 51.0 17.5 232 460-727 10-258 (331)
124 3zwl_B Eukaryotic translation 95.8 0.76 2.6E-05 47.8 21.4 235 460-723 44-306 (369)
125 3v7d_A Suppressor of kinetocho 95.8 0.0063 2.1E-07 56.5 4.0 66 244-309 48-138 (169)
126 1w6s_A Methanol dehydrogenase 95.8 0.8 2.7E-05 51.9 22.2 121 503-634 57-200 (599)
127 3bg1_A Protein SEC13 homolog; 95.7 0.26 8.8E-06 50.9 17.0 241 460-732 25-305 (316)
128 3ei3_B DNA damage-binding prot 95.7 0.46 1.6E-05 50.3 19.3 182 510-722 87-283 (383)
129 3jro_A Fusion protein of prote 95.7 0.15 5.2E-06 60.1 16.5 189 509-722 21-239 (753)
130 3g4e_A Regucalcin; six bladed 95.6 0.3 1E-05 49.9 16.9 196 508-732 24-240 (297)
131 3no2_A Uncharacterized protein 95.6 0.44 1.5E-05 48.1 17.8 185 509-727 5-203 (276)
132 3odt_A Protein DOA1; ubiquitin 95.6 0.7 2.4E-05 46.8 19.5 186 508-729 113-304 (313)
133 1sq9_A Antiviral protein SKI8; 95.5 0.58 2E-05 49.6 19.4 231 462-724 28-325 (397)
134 1jmx_B Amine dehydrogenase; ox 95.5 0.86 2.9E-05 47.1 20.4 152 460-631 11-179 (349)
135 3fvz_A Peptidyl-glycine alpha- 95.5 2.7 9.2E-05 43.3 30.7 226 475-721 69-322 (329)
136 3f3f_A Nucleoporin SEH1; struc 95.5 2.2 7.7E-05 43.5 23.4 146 509-674 71-249 (351)
137 2hes_X YDR267CP; beta-propelle 95.5 0.29 9.9E-06 50.9 16.3 189 508-721 118-328 (330)
138 1flg_A Protein (quinoprotein e 95.4 2.6 9.1E-05 47.5 25.2 117 504-633 64-201 (582)
139 1ri6_A Putative isomerase YBHE 95.4 1.9 6.4E-05 44.2 22.5 230 475-731 15-274 (343)
140 1r5m_A SIR4-interacting protei 95.3 2.9 9.9E-05 44.2 24.4 186 508-724 119-322 (425)
141 4gga_A P55CDC, cell division c 95.3 1.1 3.7E-05 48.2 21.0 219 475-722 125-354 (420)
142 3zwl_B Eukaryotic translation 95.3 0.62 2.1E-05 48.5 18.3 193 508-726 43-254 (369)
143 4gqb_B Methylosome protein 50; 95.3 0.41 1.4E-05 50.2 16.6 192 504-724 88-292 (344)
144 2vdu_B TRNA (guanine-N(7)-)-me 95.2 1.6 5.3E-05 47.5 22.0 238 461-725 116-397 (450)
145 2pm7_B Protein transport prote 95.2 0.39 1.3E-05 49.0 16.0 188 508-721 20-238 (297)
146 1r5m_A SIR4-interacting protei 95.2 0.57 2E-05 49.9 18.2 146 505-676 213-363 (425)
147 2z3z_A Dipeptidyl aminopeptida 95.2 1.6 5.4E-05 50.6 23.2 191 523-723 234-437 (706)
148 1sq9_A Antiviral protein SKI8; 95.2 0.95 3.2E-05 47.9 19.5 193 461-676 82-324 (397)
149 2z3z_A Dipeptidyl aminopeptida 95.2 0.92 3.1E-05 52.7 20.9 152 571-728 235-398 (706)
150 2pbi_B Guanine nucleotide-bind 95.1 1.2 4E-05 46.7 19.7 175 508-707 165-348 (354)
151 3u4y_A Uncharacterized protein 95.1 0.83 2.8E-05 47.0 18.3 188 508-724 9-210 (331)
152 3hfq_A Uncharacterized protein 95.1 1 3.5E-05 46.7 19.1 229 475-727 63-325 (347)
153 1vyh_C Platelet-activating fac 95.1 0.53 1.8E-05 50.6 17.2 184 508-723 119-329 (410)
154 3azo_A Aminopeptidase; POP fam 95.0 2.4 8.3E-05 48.6 23.9 193 523-727 160-375 (662)
155 3bg1_A Protein SEC13 homolog; 95.0 0.3 1E-05 50.4 14.6 189 508-721 24-247 (316)
156 3g4e_A Regucalcin; six bladed 95.0 1.3 4.4E-05 45.0 19.1 214 460-706 25-263 (297)
157 4e54_B DNA damage-binding prot 94.9 0.19 6.5E-06 54.6 13.4 187 508-722 131-328 (435)
158 1pex_A Collagenase-3, MMP-13; 94.9 1.9 6.6E-05 41.1 18.6 142 550-723 28-194 (207)
159 2xbg_A YCF48-like protein; pho 94.9 1.9 6.7E-05 44.5 20.5 204 483-719 107-320 (327)
160 2p4o_A Hypothetical protein; p 94.9 3.8 0.00013 41.7 23.4 213 501-743 34-263 (306)
161 3odt_A Protein DOA1; ubiquitin 94.8 2 6.7E-05 43.4 20.1 188 507-723 27-216 (313)
162 3k26_A Polycomb protein EED; W 94.8 3.8 0.00013 42.3 22.7 228 460-721 85-366 (366)
163 2ynn_A Coatomer subunit beta'; 94.8 1.4 4.8E-05 44.8 18.8 184 508-723 24-219 (304)
164 3ei3_B DNA damage-binding prot 94.8 1.8 6.2E-05 45.5 20.3 182 461-674 87-282 (383)
165 1pjx_A Dfpase, DIISOPROPYLFLUO 94.8 0.7 2.4E-05 47.1 16.5 195 508-723 28-258 (314)
166 1qhu_A Protein (hemopexin); be 94.7 4.7 0.00016 43.5 23.1 212 459-720 158-437 (460)
167 2fp8_A Strictosidine synthase; 94.7 3.9 0.00013 41.9 22.3 225 475-722 40-314 (322)
168 3fvz_A Peptidyl-glycine alpha- 94.7 4.5 0.00015 41.6 28.4 190 524-727 69-283 (329)
169 2hqs_A Protein TOLB; TOLB, PAL 94.6 1.3 4.6E-05 47.5 19.1 202 508-728 143-351 (415)
170 2xdw_A Prolyl endopeptidase; a 94.6 5.4 0.00018 46.2 25.6 253 460-727 136-422 (710)
171 3c5m_A Oligogalacturonate lyas 94.6 0.46 1.6E-05 50.3 15.2 195 524-727 168-390 (396)
172 4g56_B MGC81050 protein; prote 94.6 0.83 2.8E-05 48.0 16.9 190 508-722 53-259 (357)
173 1pgu_A Actin interacting prote 94.6 1.7 5.6E-05 49.1 20.6 231 459-726 29-288 (615)
174 2ecf_A Dipeptidyl peptidase IV 94.6 0.74 2.5E-05 53.8 18.1 252 459-727 47-374 (741)
175 1yfq_A Cell cycle arrest prote 94.5 2.9 9.8E-05 42.9 20.9 219 475-724 33-285 (342)
176 3c5m_A Oligogalacturonate lyas 94.5 2.9 9.8E-05 43.9 21.3 232 475-727 60-335 (396)
177 1pex_A Collagenase-3, MMP-13; 94.5 2.4 8.2E-05 40.5 18.1 142 503-676 28-194 (207)
178 1nir_A Nitrite reductase; hemo 94.5 1.9 6.5E-05 48.3 20.4 238 459-732 148-418 (543)
179 2xbg_A YCF48-like protein; pho 94.4 5.3 0.00018 41.1 26.6 220 477-728 58-286 (327)
180 3mmy_A MRNA export factor; mRN 94.4 2 6.7E-05 44.5 19.3 228 461-724 55-307 (368)
181 1qhu_A Protein (hemopexin); be 94.4 1.1 3.8E-05 48.4 17.1 173 508-721 158-385 (460)
182 3hfq_A Uncharacterized protein 94.4 0.73 2.5E-05 47.9 15.7 187 524-727 18-226 (347)
183 2pm9_A Protein WEB1, protein t 94.3 1.4 4.8E-05 46.8 18.4 240 461-724 26-297 (416)
184 3ott_A Two-component system se 94.3 1.5 5.3E-05 51.4 20.1 212 475-721 392-626 (758)
185 3e5z_A Putative gluconolactona 94.3 3.2 0.00011 41.8 20.2 221 461-724 41-289 (296)
186 3b7f_A Glycosyl hydrolase, BNR 94.3 6.4 0.00022 41.7 23.3 187 525-732 32-274 (394)
187 1erj_A Transcriptional repress 94.2 1 3.6E-05 47.9 16.9 188 508-723 134-343 (393)
188 2dg1_A DRP35, lactonase; beta 94.2 1.7 5.7E-05 44.7 18.1 199 508-726 55-268 (333)
189 3mkq_A Coatomer beta'-subunit; 94.2 0.81 2.8E-05 54.0 17.4 184 508-723 24-219 (814)
190 2bkl_A Prolyl endopeptidase; m 94.1 3.9 0.00013 47.3 22.8 246 473-727 92-357 (695)
191 2pm9_A Protein WEB1, protein t 94.0 0.76 2.6E-05 49.0 15.5 147 509-675 178-338 (416)
192 2xdw_A Prolyl endopeptidase; a 94.0 6.4 0.00022 45.5 24.5 247 473-727 96-375 (710)
193 2vdu_B TRNA (guanine-N(7)-)-me 94.0 4.9 0.00017 43.4 22.0 149 508-677 114-274 (450)
194 1itv_A MMP9; adaptive molecula 93.9 2.7 9.4E-05 39.6 16.9 140 551-723 12-176 (195)
195 3drz_A BTB/POZ domain-containi 93.9 0.02 6.8E-07 48.6 1.8 55 247-302 51-106 (107)
196 1jmx_B Amine dehydrogenase; ox 93.8 1 3.6E-05 46.4 15.7 153 508-678 10-179 (349)
197 1pby_B Quinohemoprotein amine 93.8 1.5 5.2E-05 44.8 16.8 140 475-631 11-167 (337)
198 2aq5_A Coronin-1A; WD40 repeat 93.8 1.2 4.2E-05 47.4 16.5 150 510-676 145-301 (402)
199 4ggc_A P55CDC, cell division c 93.8 4.2 0.00014 41.0 20.0 223 475-723 45-275 (318)
200 4a11_B DNA excision repair pro 93.7 1.2 4E-05 47.2 16.2 215 475-722 122-366 (408)
201 2p4o_A Hypothetical protein; p 93.6 7 0.00024 39.6 23.0 204 474-704 52-277 (306)
202 3k26_A Polycomb protein EED; W 93.6 5.8 0.0002 40.8 21.0 137 476-628 45-193 (366)
203 4aow_A Guanine nucleotide-bind 93.5 3.7 0.00013 41.9 19.3 187 509-723 51-248 (340)
204 4gga_A P55CDC, cell division c 93.5 5.8 0.0002 42.3 21.4 224 460-720 159-394 (420)
205 2ojh_A Uncharacterized protein 93.5 2 6.8E-05 42.7 16.7 185 523-728 21-213 (297)
206 3i2n_A WD repeat-containing pr 93.5 2.1 7.2E-05 44.1 17.4 227 461-722 32-292 (357)
207 3scy_A Hypothetical bacterial 93.5 8.2 0.00028 40.0 24.8 116 602-728 221-346 (361)
208 3i2n_A WD repeat-containing pr 93.5 0.85 2.9E-05 47.3 14.2 187 509-721 31-243 (357)
209 4a11_B DNA excision repair pro 93.3 0.83 2.8E-05 48.4 14.0 189 508-723 55-278 (408)
210 1qks_A Cytochrome CD1 nitrite 93.3 10 0.00034 42.5 23.2 237 460-732 167-437 (567)
211 4aow_A Guanine nucleotide-bind 93.2 2.7 9.1E-05 43.0 17.5 187 508-724 97-289 (340)
212 1kv9_A Type II quinohemoprotei 93.2 15 0.0005 42.2 28.1 65 475-539 127-195 (668)
213 3mmy_A MRNA export factor; mRN 93.2 5.1 0.00017 41.2 19.8 184 509-722 54-248 (368)
214 3b7f_A Glycosyl hydrolase, BNR 93.1 10 0.00034 40.1 23.7 232 476-732 82-384 (394)
215 1yfq_A Cell cycle arrest prote 93.1 5.4 0.00018 40.7 19.8 185 508-721 22-225 (342)
216 2dg1_A DRP35, lactonase; beta 93.1 8.5 0.00029 39.2 22.5 238 460-720 56-315 (333)
217 1pgu_A Actin interacting prote 93.0 6.8 0.00023 43.9 22.0 170 524-721 427-614 (615)
218 3pe7_A Oligogalacturonate lyas 93.0 2.2 7.5E-05 44.9 16.7 195 524-724 168-387 (388)
219 3pe7_A Oligogalacturonate lyas 93.0 2.8 9.4E-05 44.1 17.5 200 524-731 60-283 (388)
220 1pby_B Quinohemoprotein amine 93.0 1.7 5.9E-05 44.4 15.5 140 524-678 11-167 (337)
221 2bkl_A Prolyl endopeptidase; m 92.8 4.1 0.00014 47.1 20.1 214 508-727 79-313 (695)
222 1itv_A MMP9; adaptive molecula 92.8 5.6 0.00019 37.5 17.2 143 503-676 11-176 (195)
223 1erj_A Transcriptional repress 92.8 2.1 7.2E-05 45.4 16.3 144 555-722 134-288 (393)
224 3e5z_A Putative gluconolactona 92.8 4.5 0.00016 40.6 18.1 191 508-727 39-252 (296)
225 3f3f_A Nucleoporin SEH1; struc 92.7 7 0.00024 39.6 19.9 189 508-721 22-249 (351)
226 1npe_A Nidogen, entactin; glyc 92.6 8.7 0.0003 37.9 27.4 195 502-725 39-242 (267)
227 2ecf_A Dipeptidyl peptidase IV 92.4 2.1 7E-05 49.9 16.9 205 508-727 47-327 (741)
228 2gop_A Trilobed protease; beta 92.4 7.4 0.00025 39.9 19.6 216 474-718 42-290 (347)
229 1nir_A Nitrite reductase; hemo 92.3 2.2 7.4E-05 47.8 16.1 189 508-726 148-360 (543)
230 3iz6_a 40S ribosomal protein R 92.2 4.7 0.00016 42.4 18.0 184 511-721 172-375 (380)
231 3frx_A Guanine nucleotide-bind 92.0 4.6 0.00016 41.2 17.2 142 555-723 76-229 (319)
232 1kb0_A Quinohemoprotein alcoho 92.0 4.5 0.00015 46.6 18.5 118 551-680 73-207 (677)
233 3lrv_A PRE-mRNA-splicing facto 91.9 6.3 0.00021 40.6 18.3 186 508-723 47-246 (343)
234 3lrv_A PRE-mRNA-splicing facto 91.9 10 0.00034 39.0 19.9 152 555-726 138-299 (343)
235 4h5i_A Guanine nucleotide-exch 91.9 11 0.00037 39.3 20.3 177 524-721 157-343 (365)
236 1yr2_A Prolyl oligopeptidase; 91.9 22 0.00077 41.1 25.2 246 473-727 131-401 (741)
237 3hrp_A Uncharacterized protein 91.9 15 0.00052 39.1 21.7 197 503-727 135-360 (409)
238 2ghs_A AGR_C_1268P; regucalcin 91.8 13 0.00043 38.1 21.6 184 508-723 60-262 (326)
239 3ott_A Two-component system se 91.8 17 0.00057 42.4 23.8 181 508-727 73-266 (758)
240 2ghs_A AGR_C_1268P; regucalcin 91.8 13 0.00044 38.1 20.7 209 460-705 61-292 (326)
241 2xzm_R RACK1; ribosome, transl 91.4 14 0.00049 37.8 20.4 183 508-720 38-243 (343)
242 3iuj_A Prolyl endopeptidase; h 91.3 18 0.00063 41.5 23.0 253 460-728 140-412 (693)
243 1yiq_A Quinohemoprotein alcoho 91.2 7 0.00024 45.1 19.2 118 551-680 66-200 (689)
244 3dm0_A Maltose-binding peripla 91.0 9.4 0.00032 43.9 20.2 187 508-724 441-635 (694)
245 1yr2_A Prolyl oligopeptidase; 90.8 18 0.00063 41.9 22.7 252 460-728 174-448 (741)
246 3o4h_A Acylamino-acid-releasin 90.5 7 0.00024 43.9 18.2 192 508-727 121-320 (582)
247 2xyi_A Probable histone-bindin 90.4 2.8 9.6E-05 45.1 14.1 187 509-721 141-353 (430)
248 4ggc_A P55CDC, cell division c 90.2 16 0.00055 36.5 21.2 227 460-720 79-314 (318)
249 2fnj_C Transcription elongatio 90.1 0.07 2.4E-06 44.1 0.6 63 227-289 20-96 (96)
250 3frx_A Guanine nucleotide-bind 90.0 12 0.00042 37.9 18.1 222 460-721 77-317 (319)
251 3oyo_A Hemopexin fold protein 90.0 1.9 6.5E-05 41.8 10.9 99 554-673 69-197 (225)
252 3iuj_A Prolyl endopeptidase; h 90.0 24 0.00081 40.6 22.4 209 508-727 139-365 (693)
253 3c7x_A Matrix metalloproteinas 90.0 3 0.0001 39.4 12.0 143 503-676 10-177 (196)
254 2oiz_A Aromatic amine dehydrog 89.9 20 0.00069 37.2 20.9 115 460-583 16-143 (361)
255 4e54_B DNA damage-binding prot 89.9 1.7 5.8E-05 47.0 11.8 145 555-722 131-283 (435)
256 3dm0_A Maltose-binding peripla 89.9 9 0.00031 44.1 18.7 186 509-723 395-594 (694)
257 1gen_A Gelatinase A; hydrolase 89.6 14 0.00048 35.4 16.6 143 550-723 35-204 (218)
258 1su3_A Interstitial collagenas 89.6 9.9 0.00034 41.0 17.2 142 550-725 267-436 (450)
259 3v65_B Low-density lipoprotein 89.5 23 0.00079 37.2 23.7 196 524-750 96-305 (386)
260 3oyo_A Hemopexin fold protein 88.9 3.9 0.00013 39.5 12.2 139 554-720 12-197 (225)
261 1ijq_A LDL receptor, low-densi 88.9 22 0.00075 36.1 28.0 214 475-723 10-240 (316)
262 1ijq_A LDL receptor, low-densi 88.8 22 0.00075 36.1 24.4 199 524-750 10-225 (316)
263 3c7x_A Matrix metalloproteinas 88.7 5.3 0.00018 37.6 12.7 142 551-723 11-177 (196)
264 3drx_A BTB/POZ domain-containi 88.7 0.18 6.3E-06 47.4 2.4 51 252-302 61-112 (202)
265 3v65_B Low-density lipoprotein 88.6 26 0.0009 36.8 24.8 212 475-722 96-319 (386)
266 1nr0_A Actin interacting prote 88.5 36 0.0012 38.2 22.2 187 511-726 162-360 (611)
267 3azo_A Aminopeptidase; POP fam 88.4 6.4 0.00022 45.0 15.9 195 524-727 102-331 (662)
268 1qks_A Cytochrome CD1 nitrite 88.4 9.6 0.00033 42.7 16.8 188 509-724 167-376 (567)
269 2vkp_A BTB/POZ domain-containi 88.4 0.82 2.8E-05 38.5 6.2 85 223-335 21-108 (109)
270 1su3_A Interstitial collagenas 88.2 6 0.0002 42.7 14.3 142 503-676 267-434 (450)
271 3dr2_A Exported gluconolactona 88.2 9.8 0.00033 38.4 15.6 195 508-727 56-273 (305)
272 3hxj_A Pyrrolo-quinoline quino 88.1 12 0.00041 37.9 16.4 176 507-726 106-290 (330)
273 1nr0_A Actin interacting prote 88.1 38 0.0013 38.0 23.1 181 475-680 170-361 (611)
274 1w6s_A Methanol dehydrogenase 88.1 8.6 0.00029 43.4 16.2 119 551-680 58-199 (599)
275 3ju4_A Endo-N-acetylneuraminid 87.9 19 0.00064 37.2 16.3 127 531-657 267-405 (670)
276 2gop_A Trilobed protease; beta 87.9 18 0.00062 36.8 17.8 186 522-727 41-257 (347)
277 2hz6_A Endoplasmic reticulum t 87.6 0.31 1.1E-05 51.7 3.7 141 507-679 8-156 (369)
278 3gre_A Serine/threonine-protei 87.3 32 0.0011 36.3 20.0 149 508-676 181-361 (437)
279 2eqx_A Kelch repeat and BTB do 86.7 0.57 1.9E-05 39.3 4.1 37 269-305 5-41 (105)
280 3iz6_a 40S ribosomal protein R 86.7 32 0.0011 35.7 20.3 178 475-674 180-375 (380)
281 1gen_A Gelatinase A; hydrolase 86.7 23 0.00077 33.9 17.0 146 502-676 34-204 (218)
282 2xyi_A Probable histone-bindin 86.2 10 0.00034 40.6 15.0 146 556-721 141-309 (430)
283 1vcb_B Protein (elongin C); tu 86.1 0.22 7.6E-06 42.3 1.2 63 227-289 36-112 (112)
284 4h5i_A Guanine nucleotide-exch 85.8 35 0.0012 35.3 21.4 152 555-723 144-302 (365)
285 3ba0_A Macrophage metalloelast 85.7 22 0.00075 37.1 16.6 145 551-726 186-355 (365)
286 3i3n_A Kelch-like protein 11; 85.6 0.48 1.6E-05 48.0 3.7 84 223-336 44-139 (279)
287 3v64_C Agrin; beta propeller, 85.6 36 0.0012 35.1 25.9 195 524-749 53-261 (349)
288 1hv2_A Elongin C, ELC1; protei 85.5 0.28 9.6E-06 40.7 1.5 62 227-289 23-99 (99)
289 3gre_A Serine/threonine-protei 85.5 21 0.00072 37.8 17.3 148 555-723 181-361 (437)
290 2fp8_A Strictosidine synthase; 85.4 32 0.0011 34.8 17.9 183 476-675 102-314 (322)
291 3lp9_A LS-24; SEED albumin, pl 85.4 1.2 4E-05 43.4 6.1 102 553-675 70-202 (227)
292 3v64_C Agrin; beta propeller, 85.0 38 0.0013 34.9 26.7 212 476-722 54-276 (349)
293 3c75_H MADH, methylamine dehyd 84.8 39 0.0013 36.0 18.4 113 460-583 85-212 (426)
294 2xzm_R RACK1; ribosome, transl 84.6 32 0.0011 35.1 17.6 141 508-673 87-243 (343)
295 1flg_A Protein (quinoprotein e 83.9 21 0.00073 40.0 16.7 116 551-679 64-200 (582)
296 1n7d_A LDL receptor, low-densi 83.5 21 0.00072 41.1 16.8 213 476-725 387-618 (699)
297 3o4h_A Acylamino-acid-releasin 83.3 12 0.00042 41.8 14.6 189 509-719 75-274 (582)
298 2yy9_A Zinc finger and BTB dom 83.2 0.98 3.3E-05 39.9 4.2 85 223-338 34-121 (135)
299 3hrp_A Uncharacterized protein 83.0 51 0.0017 34.8 25.0 192 459-680 141-360 (409)
300 1k32_A Tricorn protease; prote 82.8 45 0.0015 40.4 20.3 145 475-634 317-468 (1045)
301 3hxj_A Pyrrolo-quinoline quino 82.6 5.2 0.00018 40.7 10.3 172 508-725 70-249 (330)
302 3ba0_A Macrophage metalloelast 82.6 32 0.0011 35.8 16.3 145 503-678 185-354 (365)
303 1hxn_A Hemopexin, HPX; heme, b 82.3 21 0.00073 34.1 13.5 136 507-673 27-196 (219)
304 3hve_A Gigaxonin; ubiquitin, c 81.8 1.7 5.8E-05 43.2 5.8 86 223-336 40-131 (256)
305 2oiz_A Aromatic amine dehydrog 81.6 51 0.0018 34.0 17.7 115 509-630 16-143 (361)
306 3dw8_B Serine/threonine-protei 81.3 52 0.0018 34.7 18.2 148 555-726 188-378 (447)
307 1k32_A Tricorn protease; prote 81.3 59 0.002 39.4 20.6 223 475-727 226-467 (1045)
308 2vpk_A Myoneurin; transcriptio 81.0 2.4 8.1E-05 36.1 5.7 80 223-333 31-115 (116)
309 1r29_A B-cell lymphoma 6 prote 80.7 2.2 7.6E-05 37.0 5.5 84 223-334 38-125 (127)
310 1hxn_A Hemopexin, HPX; heme, b 80.5 41 0.0014 32.1 15.6 136 554-721 27-197 (219)
311 3p5b_L Low density lipoprotein 80.5 61 0.0021 34.1 23.0 197 524-750 92-307 (400)
312 3m0c_C LDL receptor, low-densi 80.3 94 0.0032 36.1 23.9 194 524-749 404-618 (791)
313 2ymu_A WD-40 repeat protein; u 80.2 50 0.0017 36.4 18.2 199 475-707 366-571 (577)
314 3lp9_A LS-24; SEED albumin, pl 80.2 7.1 0.00024 37.7 9.4 100 601-722 71-202 (227)
315 3b84_A Zinc finger and BTB dom 80.2 1.9 6.4E-05 37.0 4.8 82 223-335 33-117 (119)
316 3vu4_A KMHSV2; beta-propeller 79.8 58 0.002 33.4 22.2 182 508-722 70-272 (355)
317 2mad_H Methylamine dehydrogena 79.6 62 0.0021 33.6 28.2 113 460-584 33-160 (373)
318 2q81_A MIZ-1 protein; BTB/POZ 79.4 3.5 0.00012 35.2 6.3 79 223-333 36-117 (119)
319 3dr2_A Exported gluconolactona 79.3 19 0.00065 36.2 13.1 128 523-672 168-304 (305)
320 1buo_A POZ domain, protein (pr 79.2 4.2 0.00014 34.8 6.8 81 223-335 37-120 (121)
321 2hz6_A Endoplasmic reticulum t 79.0 0.58 2E-05 49.6 1.3 142 552-726 6-156 (369)
322 1npe_A Nidogen, entactin; glyc 77.8 53 0.0018 31.9 24.8 178 474-677 57-241 (267)
323 1s1g_A Potassium voltage-gated 77.4 0.42 1.4E-05 41.4 -0.3 46 252-297 58-105 (124)
324 3vu4_A KMHSV2; beta-propeller 77.2 68 0.0023 32.8 25.5 181 460-675 71-272 (355)
325 2oaj_A Protein SNI1; WD40 repe 76.6 70 0.0024 37.9 18.8 187 508-725 28-246 (902)
326 2cn3_A Xyloglucanase, beta-1,4 76.0 1.2E+02 0.0041 34.9 27.7 242 484-742 10-308 (737)
327 2if5_A Zinc finger and BTB dom 74.7 5.9 0.0002 33.7 6.4 83 223-332 34-119 (120)
328 1nn7_A Potassium channel KV4.2 74.3 0.56 1.9E-05 39.3 -0.4 51 246-297 40-92 (105)
329 2z8h_A Transcription regulator 73.7 1.6 5.5E-05 38.6 2.5 82 223-336 45-133 (138)
330 3c75_H MADH, methylamine dehyd 73.1 97 0.0033 32.9 16.8 114 509-630 85-212 (426)
331 1xfd_A DIP, dipeptidyl aminope 72.1 70 0.0024 36.5 17.0 61 572-633 229-295 (723)
332 3p5b_L Low density lipoprotein 70.8 1.1E+02 0.0037 32.2 27.0 214 475-722 92-321 (400)
333 1sqj_A OXG-RCBH, oligoxylogluc 70.6 1.6E+02 0.0056 34.1 29.7 197 525-732 38-280 (789)
334 2ppi_A Gigaxonin; BTB domain, 70.4 3.9 0.00013 36.3 4.3 38 295-332 103-143 (144)
335 3m5b_A Zinc finger and BTB dom 69.9 5.4 0.00018 34.1 4.9 40 295-334 75-117 (119)
336 1fwx_A Nitrous oxide reductase 69.2 98 0.0034 34.4 16.0 259 473-743 110-453 (595)
337 2ast_A S-phase kinase-associat 68.6 16 0.00054 33.0 8.1 55 293-359 85-139 (159)
338 1t1d_A Protein (potassium chan 68.4 2.7 9.4E-05 34.6 2.6 51 246-297 42-95 (100)
339 3sjl_D Methylamine dehydrogena 66.6 1.3E+02 0.0044 31.4 19.6 70 649-725 291-367 (386)
340 2nz0_B Potassium voltage-gated 66.3 0.6 2.1E-05 41.3 -2.0 46 252-297 80-127 (140)
341 2ymu_A WD-40 repeat protein; u 66.2 1.5E+02 0.0053 32.2 21.3 208 476-722 326-540 (577)
342 1n7d_A LDL receptor, low-densi 66.0 27 0.00093 40.1 11.4 196 524-749 386-600 (699)
343 3m0c_C LDL receptor, low-densi 65.8 2E+02 0.0068 33.4 28.0 210 477-722 406-633 (791)
344 3htm_A Speckle-type POZ protei 65.3 4.7 0.00016 36.9 3.9 35 271-305 131-165 (172)
345 3dw8_B Serine/threonine-protei 64.6 1.4E+02 0.0048 31.1 16.9 103 602-721 188-315 (447)
346 2p9w_A MAL S 1 allergenic prot 64.6 1.3E+02 0.0044 30.7 21.6 216 474-705 34-304 (334)
347 1xfd_A DIP, dipeptidyl aminope 64.4 52 0.0018 37.6 13.6 196 525-727 38-295 (723)
348 2xe4_A Oligopeptidase B; hydro 62.4 2E+02 0.0068 33.1 18.1 200 508-719 185-398 (751)
349 3kvt_A Potassium channel prote 62.2 1.1 3.9E-05 38.1 -1.0 54 252-305 51-107 (115)
350 4eoz_A Speckle-type POZ protei 60.9 7.5 0.00026 34.3 4.3 34 304-337 91-124 (145)
351 3ga1_A Nucleus accumbens-assoc 60.8 3 0.0001 36.2 1.5 82 223-335 42-127 (129)
352 3a0f_A Xyloglucanase; beta-pro 59.6 2.5E+02 0.0085 32.4 26.3 197 525-732 44-295 (763)
353 2mad_H Methylamine dehydrogena 58.8 1.7E+02 0.0058 30.2 22.5 100 525-631 48-160 (373)
354 1ck7_A Protein (gelatinase A); 57.7 51 0.0018 36.9 11.1 143 551-722 449-616 (631)
355 1z68_A Fibroblast activation p 53.9 2.8E+02 0.0096 31.3 17.9 194 524-724 224-446 (719)
356 1sqj_A OXG-RCBH, oligoxylogluc 53.5 3.1E+02 0.011 31.7 27.9 242 476-728 38-340 (789)
357 2cn3_A Xyloglucanase, beta-1,4 53.2 3E+02 0.01 31.4 26.7 220 476-704 46-321 (737)
358 2xe4_A Oligopeptidase B; hydro 53.1 3.1E+02 0.011 31.5 22.5 253 459-728 185-465 (751)
359 1ck7_A Protein (gelatinase A); 52.6 66 0.0022 36.1 10.9 144 503-675 448-616 (631)
360 3hqi_A Speckle-type POZ protei 52.0 9.7 0.00033 38.8 3.9 35 271-305 271-305 (312)
361 3tc9_A Hypothetical hydrolase; 51.5 1.5E+02 0.0052 31.3 13.6 143 508-673 149-300 (430)
362 2p9w_A MAL S 1 allergenic prot 47.0 2.5E+02 0.0084 28.6 20.9 213 524-753 35-305 (334)
363 1fs1_B SKP1, cyclin A/CDK2-ass 46.9 45 0.0016 29.2 6.9 44 292-337 79-122 (141)
364 4a0p_A LRP6, LRP-6, low-densit 44.5 3.8E+02 0.013 30.0 25.5 196 524-749 15-223 (628)
365 2qe8_A Uncharacterized protein 44.0 2.6E+02 0.009 28.0 18.5 227 502-748 20-306 (343)
366 3tc9_A Hypothetical hydrolase; 43.7 1.1E+02 0.0039 32.4 11.0 143 555-720 149-300 (430)
367 3qhy_B Beta-lactamase inhibito 42.3 1.3E+02 0.0043 29.8 10.4 133 500-658 72-206 (282)
368 2ihc_A Transcription regulator 42.0 3.7 0.00013 35.4 -1.1 79 223-333 38-123 (124)
369 4a0p_A LRP6, LRP-6, low-densit 41.0 4.2E+02 0.014 29.6 28.0 211 475-721 15-237 (628)
370 2ece_A 462AA long hypothetical 39.8 3.7E+02 0.013 28.6 25.9 116 508-629 95-239 (462)
371 2oit_A Nucleoporin 214KDA; NH2 39.7 3.6E+02 0.012 28.3 18.5 115 556-682 162-292 (434)
372 1mda_H Methylamine dehydrogena 39.0 3.4E+02 0.012 27.9 14.3 84 649-740 275-363 (368)
373 3sov_A LRP-6, low-density lipo 38.8 3.1E+02 0.011 27.4 23.2 184 508-723 46-240 (318)
374 2p1m_A SKP1-like protein 1A; F 36.8 55 0.0019 29.3 6.0 50 298-359 89-138 (160)
375 3sov_A LRP-6, low-density lipo 36.3 3.4E+02 0.012 27.1 21.7 193 524-749 13-224 (318)
376 2oaj_A Protein SNI1; WD40 repe 35.3 6E+02 0.021 29.7 26.4 187 460-678 29-246 (902)
377 3a0f_A Xyloglucanase; beta-pro 34.7 5.7E+02 0.02 29.2 25.7 199 476-685 44-295 (763)
378 3ohu_A Transcription regulator 34.5 4 0.00014 35.1 -2.1 80 223-331 41-124 (125)
379 3ei3_A DNA damage-binding prot 33.5 7.3E+02 0.025 30.1 17.6 161 524-698 807-981 (1158)
380 1fwx_A Nitrous oxide reductase 32.1 3E+02 0.01 30.4 12.0 155 555-722 101-309 (595)
381 2j04_A TAU60, YPL007P, hypothe 28.1 6.4E+02 0.022 27.8 19.4 174 508-707 96-289 (588)
382 3k6s_A Integrin alpha-X; cell 27.1 3.4E+02 0.011 32.8 12.2 175 547-724 335-545 (1095)
383 3sjl_D Methylamine dehydrogena 25.7 5.7E+02 0.02 26.4 19.8 114 459-583 44-172 (386)
384 4hw6_A Hypothetical protein, I 24.3 6.1E+02 0.021 26.5 12.7 151 555-723 152-306 (433)
385 1jof_A Carboxy-CIS,CIS-muconat 24.3 5.5E+02 0.019 25.7 22.5 104 571-679 167-297 (365)
386 4hvt_A Ritya.17583.B, post-pro 24.0 4.6E+02 0.016 29.8 12.2 169 511-686 256-441 (711)
387 1z68_A Fibroblast activation p 21.1 5.6E+02 0.019 28.7 12.5 164 508-677 263-446 (719)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.6e-47 Score=403.43 Aligned_cols=292 Identities=30% Similarity=0.587 Sum_probs=264.0
Q ss_pred ccCCCCC---CCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEE
Q psy17309 452 IARPRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRC 528 (824)
Q Consensus 452 ~~~~r~~---~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 528 (824)
+++||.. .+.|+++||... ...+++++||+.+++|..+ +++|.+|..|++++++++||++||.++....+++++
T Consensus 5 ~~~~r~~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 81 (302)
T 2xn4_A 5 RTRLRTPMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQV--AELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDS 81 (302)
T ss_dssp ----------CEEEEEECCBSS-SBCCCEEEEETTTTEEEEE--CCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEE
T ss_pred cccCCcccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEc--ccCCcccccceEEEECCEEEEEeCcCCCccccceEE
Confidence 3445543 568999999764 4567899999999999995 577889999999999999999999987777899999
Q ss_pred EECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEE
Q psy17309 529 FNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYIT 608 (824)
Q Consensus 529 yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~ 608 (824)
||+.+++|+.++++|.+|..|++++++++||++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++
T Consensus 82 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 161 (302)
T 2xn4_A 82 YDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAV 161 (302)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred ECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEE
Confidence 99999999999999999999999999999999999987777889999999999999999999999999999999999999
Q ss_pred cccCCC--CcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCC
Q psy17309 609 GGFNGH--NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 686 (824)
Q Consensus 609 GG~~~~--~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 686 (824)
||.++. ...+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+++++|+.++++|.+
T Consensus 162 GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 241 (302)
T 2xn4_A 162 GGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC 241 (302)
T ss_dssp CCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred eCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc
Confidence 998654 347899999999999999999999999999999999999999988777788999999999999999999999
Q ss_pred CcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEecc-CCCCCccceeEEEEcCcc
Q psy17309 687 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT-DMNIYRSALSACVIMGLP 746 (824)
Q Consensus 687 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~~ 746 (824)
|..++++.++++||++||.++....+++++||+++++|+.++ .||.+|..|++++++++|
T Consensus 242 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 242 RRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred cccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEecccC
Confidence 999999999999999999987777889999999999999996 899999999999998764
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=9.8e-47 Score=401.70 Aligned_cols=287 Identities=24% Similarity=0.453 Sum_probs=262.8
Q ss_pred cCCCCC-CCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEEC
Q psy17309 453 ARPRVP-HEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNA 531 (824)
Q Consensus 453 ~~~r~~-~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~ 531 (824)
.+||.. .+.|+++||... .++++.||+.+++|..+ +++|.+|.+|++++++++||++||.+ ....+++++||+
T Consensus 4 ~~pr~~~~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~ 77 (306)
T 3ii7_A 4 TRPRRKKHDYRIALFGGSQ---PQSCRYFNPKDYSWTDI--RCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNV 77 (306)
T ss_dssp ------CCCEEEEEECCSS---TTSEEEEETTTTEEEEC--CCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEET
T ss_pred ccCCccccceEEEEeCCCC---CceEEEecCCCCCEecC--CCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeC
Confidence 345543 479999999765 78899999999999994 56788999999999999999999988 667899999999
Q ss_pred CCCceEEeccCCCCcceEEEEEECCEEEEEeccc-CCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcc
Q psy17309 532 VTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGG 610 (824)
Q Consensus 532 ~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 610 (824)
.+++|..++++|.+|..|++++++++||++||.+ +...++++++||+.+++|+.++++|.+|..|++++++++|||+||
T Consensus 78 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 157 (306)
T 3ii7_A 78 VKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGG 157 (306)
T ss_dssp TTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECC
Confidence 9999999999999999999999999999999987 666789999999999999999999999999999999999999999
Q ss_pred cCCCCc----CCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCC
Q psy17309 611 FNGHNC----LNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 686 (824)
Q Consensus 611 ~~~~~~----~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 686 (824)
.+.... .+++++||+.+++|+.++++|.+|..|+++.++++||++||.+.....+++++||+.+++|+.++++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp EESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC
T ss_pred CCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC
Confidence 876544 8999999999999999999999999999999999999999987776788999999999999999999999
Q ss_pred CcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEeccCCCCCccceeEEEEcCc
Q psy17309 687 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 745 (824)
Q Consensus 687 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 745 (824)
|..+++++++++|||+||.++....+++++||+++++|+.++++|.+|..|+++++.+.
T Consensus 238 r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~ 296 (306)
T 3ii7_A 238 GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVDT 296 (306)
T ss_dssp BSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEEC
T ss_pred ccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECCc
Confidence 99999999999999999998877888999999999999999999999999999887664
No 3
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-46 Score=399.16 Aligned_cols=290 Identities=36% Similarity=0.714 Sum_probs=265.9
Q ss_pred ccCCCCC-CCEEEEEcc-CCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEE
Q psy17309 452 IARPRVP-HEILFAIGG-WSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCF 529 (824)
Q Consensus 452 ~~~~r~~-~~~l~~~GG-~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~y 529 (824)
+.+||.. .+.++++|| .......+.+++||+.+++|..+ +++|.+|..|+++..+++||++||.++....+++++|
T Consensus 6 ~~~pr~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 83 (301)
T 2vpj_A 6 RTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFL--PSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECL 83 (301)
T ss_dssp -------CCEEEEEECCEETTTEECCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE
T ss_pred cccccccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeC--CCCChhhccccEEEECCEEEEEcCCCCCccCceEEEE
Confidence 4456654 568999999 55566788999999999999995 4677899999999999999999999877788999999
Q ss_pred ECCCCc---eEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEE
Q psy17309 530 NAVTKV---WKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIY 606 (824)
Q Consensus 530 d~~~~~---W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~ly 606 (824)
|+.+++ |+.++++|.+|..|++++++++||++||..+...++++++||+.+++|+.++++|.+|..|++++++++||
T Consensus 84 d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 163 (301)
T 2vpj_A 84 DYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIY 163 (301)
T ss_dssp ETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEE
T ss_pred ECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEE
Confidence 999999 99999999999999999999999999999877778999999999999999999999999999999999999
Q ss_pred EEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCC
Q psy17309 607 ITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 686 (824)
Q Consensus 607 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 686 (824)
++||.++....+++++||+.+++|+.++++|.+|..|+++.++++||++||.+.....+++++||+.+++|+.++++|.+
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 99999877788999999999999999999999999999999999999999988776789999999999999999999999
Q ss_pred CcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEeccCCCCCccceeEEEEc
Q psy17309 687 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIM 743 (824)
Q Consensus 687 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 743 (824)
|..+++++++++||++||.++....+++++||+++++|+.+++||.+|..|+++++.
T Consensus 244 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 999999999999999999987777889999999999999999999999999999875
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.5e-46 Score=400.35 Aligned_cols=282 Identities=35% Similarity=0.688 Sum_probs=264.1
Q ss_pred CCCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeec----CCCcccceEEEEECCC
Q psy17309 458 PHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGF----DGNEYYNSCRCFNAVT 533 (824)
Q Consensus 458 ~~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~----~~~~~~~~~~~yd~~~ 533 (824)
-.+.|+++||. .+...+++++||+.+++|..+ +++|.+|..|++++++++||++||. ++....+++++||+.+
T Consensus 23 ~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 23 VGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRL--ADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCCEEEECCB-SSSBCCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCCEEEEEeCc-CCCCcceEEEEcCCCCeEeEC--CCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 35789999998 556778899999999999995 6778899999999999999999998 5556678999999999
Q ss_pred CceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCC
Q psy17309 534 KVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG 613 (824)
Q Consensus 534 ~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~ 613 (824)
++|+.++++|.+|..|++++++++||++||..+...++++++||+.+++|+.++++|.+|..|++++++++||++||.++
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 179 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG 179 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred CeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCC
Confidence 99999999999999999999999999999988777789999999999999999999999999999999999999999987
Q ss_pred CCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEE
Q psy17309 614 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIE 693 (824)
Q Consensus 614 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 693 (824)
....+++++||+.+++|+.++++|.+|..|+++.++++||++||.++....+++++||+.+++|+.++++|.+|..++++
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 259 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGIT 259 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEE
Confidence 76789999999999999999999999999999999999999999887777899999999999999999999999999999
Q ss_pred EECCEEEEEccCCCCceeeEEEEEECCCCcEEeccCCCCCccceeEEEE
Q psy17309 694 VIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 742 (824)
Q Consensus 694 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 742 (824)
+++++|||+||.++....+++++||+++++|+.+++||.+|..|+++++
T Consensus 260 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 260 VHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp EETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred EECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 9999999999998877889999999999999999999999999998863
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.8e-47 Score=402.60 Aligned_cols=198 Identities=39% Similarity=0.676 Sum_probs=185.4
Q ss_pred CCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEe
Q psy17309 498 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYN 577 (824)
Q Consensus 498 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 577 (824)
+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|++++++++||++||.++...++++++||
T Consensus 111 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 190 (308)
T 1zgk_A 111 PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYY 190 (308)
T ss_dssp CCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEE
T ss_pred CccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEe
Confidence 56667788888999999998777778999999999999999999999999999999999999999998776789999999
Q ss_pred CCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEec
Q psy17309 578 YTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGG 657 (824)
Q Consensus 578 ~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 657 (824)
+.+++|+.++++|.+|..|++++++++|||+||.++....+++++||+++++|+.++++|.+|..++++.++++||++||
T Consensus 191 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 270 (308)
T 1zgk_A 191 PERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGG 270 (308)
T ss_dssp TTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcC
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred CCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE
Q psy17309 658 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI 695 (824)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 695 (824)
.++....+++++||+++++|+.++++|.+|..++++++
T Consensus 271 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 271 YDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp BCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred cCCCcccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 88777789999999999999999999999999998864
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.4e-45 Score=390.18 Aligned_cols=202 Identities=36% Similarity=0.615 Sum_probs=186.3
Q ss_pred CCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCC--CCCeEEE
Q psy17309 498 PRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQR--RQNSVEK 575 (824)
Q Consensus 498 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~ 575 (824)
+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|++++++++||++||.++.. .++++++
T Consensus 98 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 177 (302)
T 2xn4_A 98 RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVEC 177 (302)
T ss_dssp CCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEE
T ss_pred cccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEE
Confidence 45667788888999999999877778999999999999999999999999999999999999999987543 4789999
Q ss_pred EeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEE
Q psy17309 576 YNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVI 655 (824)
Q Consensus 576 yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 655 (824)
||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+++++|+.++++|.+|..|+++.++++||++
T Consensus 178 yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~ 257 (302)
T 2xn4_A 178 YNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVV 257 (302)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred EeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEE
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999999999999
Q ss_pred ecCCCCCccceEEEEeCCCCCEEECC-CCCCCCcceEEEEECCEE
Q psy17309 656 GGFNGMSRMCNGEKYNPVTKTWSQVP-DMYNPRSNFAIEVIDDMI 699 (824)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i 699 (824)
||.++....+++++||+++++|+.++ ++|.+|..|++++++++|
T Consensus 258 GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred CCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEecccC
Confidence 99887777899999999999999997 899999999999998875
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.6e-45 Score=392.33 Aligned_cols=281 Identities=22% Similarity=0.389 Sum_probs=255.1
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecC------CCcccceEEEEECCC
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFD------GNEYYNSCRCFNAVT 533 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~------~~~~~~~~~~yd~~~ 533 (824)
+.++++|| +.+++|||.+++|.. +..+.|.+|.+|++++++++||++||.. .....+++++||+.+
T Consensus 5 ~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~ 76 (315)
T 4asc_A 5 DLIFMISE-------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLD 76 (315)
T ss_dssp EEEEEEET-------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTT
T ss_pred eEEEEEcC-------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCC
Confidence 57899999 679999999999987 4445577999999999999999999962 123356699999999
Q ss_pred CceEEeccCCCCcceEEEEEECCEEEEEeccc---CCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcc
Q psy17309 534 KVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN---GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGG 610 (824)
Q Consensus 534 ~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG 610 (824)
++|+.++++|.+|..|++++++++||++||.+ +...++++++||+.+++|+.++++|.+|.+|++++++++|||+||
T Consensus 77 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 77 SEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp TEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeC
Confidence 99999999999999999999999999999975 356789999999999999999999999999999999999999999
Q ss_pred c-CCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcc
Q psy17309 611 F-NGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN 689 (824)
Q Consensus 611 ~-~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 689 (824)
. ++....+++++||+.+++|+.++++|.+|..|+++.++++||++||.+.....+++++||+.+++|+.++++|.+|..
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS 236 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc
Confidence 9 556678999999999999999999999999999999999999999988777788999999999999999999999999
Q ss_pred eEEEEECCEEEEEccCCCC---------ceeeEEEEEECCCCcEEeccCCCCCccceeEEEEcCccceec
Q psy17309 690 FAIEVIDDMIFAIGGFNGV---------TTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVYD 750 (824)
Q Consensus 690 ~~~~~~~~~i~v~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~~~~~~ 750 (824)
+++++++++||++||.+.. ...+++++||+++++|+.+ +|.+|..|+++++++++|++.
T Consensus 237 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~l~v~~ 304 (315)
T 4asc_A 237 LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVRLNVLR 304 (315)
T ss_dssp CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEEEEECGGG
T ss_pred eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeCCEEEEEE
Confidence 9999999999999998531 3568899999999999999 677899999999999999873
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.8e-45 Score=388.62 Aligned_cols=287 Identities=24% Similarity=0.404 Sum_probs=252.1
Q ss_pred CCCCcCC-CcEEEEEccCCCCCCCcceEEEECCCCcEEeeccCCCCCCcCeEEEEEECCEEEEEccCCCCcccceEEEEE
Q psy17309 38 IARPRVP-HEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFN 116 (824)
Q Consensus 38 ~~~~r~~-~~~i~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~p~~R~~h~~~~~~~~~yv~GG~~~~~~~~~~~~~~ 116 (824)
+++||.. ++.||+|||... .+++++||+.+++|..++.++ .+|.+|++++++++||||||.+ ...++++++||
T Consensus 3 ~~~pr~~~~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d 76 (306)
T 3ii7_A 3 GTRPRRKKHDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCPF--EKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYN 76 (306)
T ss_dssp -------CCCEEEEEECCSS---TTSEEEEETTTTEEEECCCCS--CCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEE
T ss_pred cccCCccccceEEEEeCCCC---CceEEEecCCCCCEecCCCCC--cccceeEEEEECCEEEEEeCCC-CCCcceEEEEe
Confidence 4556643 479999999655 789999999999999998654 8999999999999999999988 77889999999
Q ss_pred ccCCceeEecccCCCcceeEEEEECCEEEEEcCcC-CCCCCCcEEEEECCCCeEEEeccccceeeccCCeEEEEcccCCc
Q psy17309 117 AVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNCMIQNVTYNIYVIGGFDGN 195 (824)
Q Consensus 117 ~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~i~v~GG~~~~ 195 (824)
+.+++|++++++|.+|..|++++++++||||||.+ +...++++++||+.+++|+.+++|+
T Consensus 77 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p------------------- 137 (306)
T 3ii7_A 77 VVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML------------------- 137 (306)
T ss_dssp TTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS-------------------
T ss_pred CCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc-------------------
Confidence 99999999999999999999999999999999997 5566889999999888887665442
Q ss_pred eeeceEEEEECCCCeEEEecccccCcceeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHh
Q psy17309 196 EYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITED 275 (824)
Q Consensus 196 ~~~~~~~~~~~~~~~W~~i~~~~~~r~~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~ 275 (824)
T Consensus 138 -------------------------------------------------------------------------------- 137 (306)
T 3ii7_A 138 -------------------------------------------------------------------------------- 137 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhhcChHhHHHHHHHHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCchhhhcCCHHHHH
Q psy17309 276 NVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELE 355 (824)
Q Consensus 276 ~v~~ll~~a~~~~i~~l~~~c~~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f~~L~~~~l~ 355 (824)
T Consensus 138 -------------------------------------------------------------------------------- 137 (306)
T 3ii7_A 138 -------------------------------------------------------------------------------- 137 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCcccCChHHHHHHHHHHHhcCccchHHHHHHhhhhccCCCCChHHHHhhccCCccccCCchhHHHHHHHHHHhh
Q psy17309 356 EIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFKFLY 435 (824)
Q Consensus 356 ~ll~~d~L~v~~E~~v~~av~~W~~~~~~~r~~~~~~ll~~vr~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 435 (824)
T Consensus 138 -------------------------------------------------------------------------------- 137 (306)
T 3ii7_A 138 -------------------------------------------------------------------------------- 137 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhccCCCCCCCCccCCCCCCCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEe
Q psy17309 436 DLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIG 515 (824)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~r~~~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~G 515 (824)
.+|..|++++++++||++|
T Consensus 138 -------------------------------------------------------------~~r~~~~~~~~~~~iyv~G 156 (306)
T 3ii7_A 138 -------------------------------------------------------------TQRCSHGMVEANGLIYVCG 156 (306)
T ss_dssp -------------------------------------------------------------SCCBSCEEEEETTEEEEEC
T ss_pred -------------------------------------------------------------CCcceeEEEEECCEEEEEC
Confidence 2455566777788888888
Q ss_pred ecCCCcc----cceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCc
Q psy17309 516 GFDGNEY----YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNV 591 (824)
Q Consensus 516 G~~~~~~----~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~ 591 (824)
|.++... .+++++||+.+++|+.++++|.+|..|++++++++||++||.+.....+++++||+.+++|+.++++|.
T Consensus 157 G~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 236 (306)
T 3ii7_A 157 GSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW 236 (306)
T ss_dssp CEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC
T ss_pred CCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC
Confidence 8765443 789999999999999999999999999999999999999998877678899999999999999999999
Q ss_pred ccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECC
Q psy17309 592 ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHE 650 (824)
Q Consensus 592 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 650 (824)
+|..|++++++++|||+||.++....+++++||+++++|+.++++|.+|..|+++++.+
T Consensus 237 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 237 KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEE
T ss_pred CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECC
Confidence 99999999999999999999877788999999999999999999999999999887754
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=6.7e-45 Score=386.59 Aligned_cols=290 Identities=33% Similarity=0.672 Sum_probs=257.7
Q ss_pred CCCCcCC-CcEEEEEcc-CCCCCCCcceEEEECCCCcEEeeccCCCCCCcCeEEEEEECCEEEEEccCCCCcccceEEEE
Q psy17309 38 IARPRVP-HEILFAIGG-WSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCF 115 (824)
Q Consensus 38 ~~~~r~~-~~~i~~~GG-~~~~~~~~~~~~~d~~~~~W~~~~~~~~p~~R~~h~~~~~~~~~yv~GG~~~~~~~~~~~~~ 115 (824)
+++||.. .+.||+||| ......+++++.||+.+++|..++.++ .+|.+|++++++++||||||.++...++++++|
T Consensus 6 ~~~pr~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 83 (301)
T 2vpj_A 6 RTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSIT--RKRRYVASVSLHDRIYVIGGYDGRSRLSSVECL 83 (301)
T ss_dssp -------CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCS--SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE
T ss_pred cccccccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCC--hhhccccEEEECCEEEEEcCCCCCccCceEEEE
Confidence 6777743 468999999 555556899999999999999998654 789999999999999999999888889999999
Q ss_pred EccCCc---eeEecccCCCcceeEEEEECCEEEEEcCcCCCCCCCcEEEEECCCCeEEEeccccceeeccCCeEEEEccc
Q psy17309 116 NAVTKV---WKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNCMIQNVTYNIYVIGGF 192 (824)
Q Consensus 116 ~~~~~~---W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~i~v~GG~ 192 (824)
|+.+++ |++++++|.+|..|++++++++||++||.++...++++++||+.+++|+.+++++
T Consensus 84 d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p---------------- 147 (301)
T 2vpj_A 84 DYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ---------------- 147 (301)
T ss_dssp ETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS----------------
T ss_pred ECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCC----------------
Confidence 999999 9999999999999999999999999999988777889999999999987765542
Q ss_pred CCceeeceEEEEECCCCeEEEecccccCcceeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceec
Q psy17309 193 DGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHI 272 (824)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~W~~i~~~~~~r~~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l 272 (824)
T Consensus 148 -------------------------------------------------------------------------------- 147 (301)
T 2vpj_A 148 -------------------------------------------------------------------------------- 147 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CHhhHHHHHHHHhhcChHhHHHHHHHHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCchhhhcCCHH
Q psy17309 273 TEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQ 352 (824)
Q Consensus 273 ~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f~~L~~~ 352 (824)
T Consensus 148 -------------------------------------------------------------------------------- 147 (301)
T 2vpj_A 148 -------------------------------------------------------------------------------- 147 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCcccCChHHHHHHHHHHHhcCccchHHHHHHhhhhccCCCCChHHHHhhccCCccccCCchhHHHHHHHHH
Q psy17309 353 ELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFK 432 (824)
Q Consensus 353 ~l~~ll~~d~L~v~~E~~v~~av~~W~~~~~~~r~~~~~~ll~~vr~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~ 432 (824)
T Consensus 148 -------------------------------------------------------------------------------- 147 (301)
T 2vpj_A 148 -------------------------------------------------------------------------------- 147 (301)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhhhhccCCCCCCCCccCCCCCCCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEE
Q psy17309 433 FLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIY 512 (824)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~ly 512 (824)
.+|..|++++++++||
T Consensus 148 ----------------------------------------------------------------~~r~~~~~~~~~~~iy 163 (301)
T 2vpj_A 148 ----------------------------------------------------------------TAREGAGLVVASGVIY 163 (301)
T ss_dssp ----------------------------------------------------------------SCCBSCEEEEETTEEE
T ss_pred ----------------------------------------------------------------CCcccceEEEECCEEE
Confidence 1345567777789999
Q ss_pred EEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcc
Q psy17309 513 VIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE 592 (824)
Q Consensus 513 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~ 592 (824)
++||.++....+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 99998877778999999999999999999999999999999999999999998776789999999999999999999999
Q ss_pred cCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEEC
Q psy17309 593 RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYH 649 (824)
Q Consensus 593 r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 649 (824)
|..|++++++++||++||.++....+++++||+++++|+.+++||.+|..|+++.++
T Consensus 244 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 999999999999999999987777789999999999999999999999999998764
No 10
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-44 Score=386.81 Aligned_cols=287 Identities=21% Similarity=0.392 Sum_probs=256.0
Q ss_pred cCCCCC---CCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecC--C----Cccc
Q psy17309 453 ARPRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFD--G----NEYY 523 (824)
Q Consensus 453 ~~~r~~---~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~--~----~~~~ 523 (824)
.+||.. .+.|+++||. .+++|||.+++|... ..+.+.+|..|+++..+++||++||.. . ....
T Consensus 6 ~~~r~~~~~~~~i~~~GG~-------~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 77 (318)
T 2woz_A 6 DIPRHGMFVKDLILLVNDT-------AAVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQ 77 (318)
T ss_dssp SSCCCCCSEEEEEEEECSS-------EEEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCC
T ss_pred ccccccceecchhhhcccc-------ceEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCcc
Confidence 345655 4689999993 489999999999983 344567899999999999999999953 1 1224
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEeccc--CCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN--GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 601 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~ 601 (824)
+++++||+.+++|+.++++|.+|..|++++++++||++||.. +...++++++||+.+++|+.++++|.+|.+|+++++
T Consensus 78 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 78 SYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH 157 (318)
T ss_dssp BEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE
T ss_pred ccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE
Confidence 569999999999999999999999999999999999999986 445678999999999999999999999999999999
Q ss_pred CCEEEEEcccC-CCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEEC
Q psy17309 602 QGKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 680 (824)
Q Consensus 602 ~~~lyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 680 (824)
+++|||+||.+ +....+++++||+.+++|+.++++|.+|..|++++++++|||+||.+.....+++++||+.+++|+.+
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEEC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEEC
Confidence 99999999984 34568999999999999999999999999999999999999999987766688999999999999999
Q ss_pred CCCCCCCcceEEEEECCEEEEEccCCCC---------ceeeEEEEEECCCCcEEeccCCCCCccceeEEEEcCcccee
Q psy17309 681 PDMYNPRSNFAIEVIDDMIFAIGGFNGV---------TTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVY 749 (824)
Q Consensus 681 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~~~~~ 749 (824)
+++|.+|..|++++++++||++||.+.. ...+++++||+++++|+.+ +|.+|..|+++++++++|++
T Consensus 238 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~iyi~ 313 (318)
T 2woz_A 238 TEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYASGASCLATRLNLF 313 (318)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGTTCEEEEEEEEGG
T ss_pred CCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccccccceeeCCEEEEE
Confidence 9999999999999999999999998652 3467899999999999999 88999999999999999986
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=9.1e-44 Score=380.32 Aligned_cols=282 Identities=23% Similarity=0.373 Sum_probs=247.7
Q ss_pred cEEEEEccCCCCCCCcceEEEECCCCcEEeeccCCCCCCcCeEEEEEECCEEEEEccCC------CCcccceEEEEEccC
Q psy17309 46 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFD------GNEYYNSCRCFNAVT 119 (824)
Q Consensus 46 ~~i~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~p~~R~~h~~~~~~~~~yv~GG~~------~~~~~~~~~~~~~~~ 119 (824)
+.|++||| ++++.||+.+++|.. +.++.|.+|.+|++++++++||||||.. .....+++++||+.+
T Consensus 5 ~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~ 76 (315)
T 4asc_A 5 DLIFMISE-------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLD 76 (315)
T ss_dssp EEEEEEET-------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTT
T ss_pred eEEEEEcC-------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCC
Confidence 57999999 689999999999997 5666678999999999999999999951 224567899999999
Q ss_pred CceeEecccCCCcceeEEEEECCEEEEEcCcC---CCCCCCcEEEEECCCCeEEEeccccceeeccCCeEEEEcccCCce
Q psy17309 120 KVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYN---GQRRQNSVEKYNYTENQWSLIAPMNCMIQNVTYNIYVIGGFDGNE 196 (824)
Q Consensus 120 ~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~---~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~i~v~GG~~~~~ 196 (824)
++|++++++|.+|.+|++++++++||||||.+ +...++++++||+.+++|+.++++
T Consensus 77 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~--------------------- 135 (315)
T 4asc_A 77 SEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL--------------------- 135 (315)
T ss_dssp TEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC---------------------
T ss_pred CeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC---------------------
Confidence 99999999999999999999999999999975 345577888888888877655443
Q ss_pred eeceEEEEECCCCeEEEecccccCcceeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhh
Q psy17309 197 YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDN 276 (824)
Q Consensus 197 ~~~~~~~~~~~~~~W~~i~~~~~~r~~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~ 276 (824)
T Consensus 136 -------------------------------------------------------------------------------- 135 (315)
T 4asc_A 136 -------------------------------------------------------------------------------- 135 (315)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcChHhHHHHHHHHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCchhhhcCCHHHHHH
Q psy17309 277 VASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEE 356 (824)
Q Consensus 277 v~~ll~~a~~~~i~~l~~~c~~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f~~L~~~~l~~ 356 (824)
T Consensus 136 -------------------------------------------------------------------------------- 135 (315)
T 4asc_A 136 -------------------------------------------------------------------------------- 135 (315)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCCcccCChHHHHHHHHHHHhcCccchHHHHHHhhhhccCCCCChHHHHhhccCCccccCCchhHHHHHHHHHHhhh
Q psy17309 357 IISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFKFLYD 436 (824)
Q Consensus 357 ll~~d~L~v~~E~~v~~av~~W~~~~~~~r~~~~~~ll~~vr~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 436 (824)
T Consensus 136 -------------------------------------------------------------------------------- 135 (315)
T 4asc_A 136 -------------------------------------------------------------------------------- 135 (315)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhccCCCCCCCCccCCCCCCCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEee
Q psy17309 437 LELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGG 516 (824)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~r~~~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG 516 (824)
|.+|..|++++++++||++||
T Consensus 136 -----------------------------------------------------------p~~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 136 -----------------------------------------------------------PYVVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp -----------------------------------------------------------SSCCBSCEEEEETTEEEEECC
T ss_pred -----------------------------------------------------------CCcccceeEEEECCEEEEEeC
Confidence 235666778888899999999
Q ss_pred c-CCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCc
Q psy17309 517 F-DGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSD 595 (824)
Q Consensus 517 ~-~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~ 595 (824)
. .+....+++++||+.+++|+.++++|.+|..|++++++++||++||.++...++++++||+.+++|+.++++|.+|..
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS 236 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc
Confidence 8 556678999999999999999999999999999999999999999998777788999999999999999999999999
Q ss_pred eEEEEECCEEEEEcccCCC---------CcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEec
Q psy17309 596 ASATTLQGKIYITGGFNGH---------NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGG 657 (824)
Q Consensus 596 ~~~~~~~~~lyv~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 657 (824)
|++++++++|||+||.++. ...+++++||+++++|+.+ +|.+|..+++++++++||++..
T Consensus 237 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 237 LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEEEEECGGGS
T ss_pred eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeCCEEEEEEe
Confidence 9999999999999998531 3468899999999999999 5677888999999999999865
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=7.3e-43 Score=373.83 Aligned_cols=289 Identities=21% Similarity=0.363 Sum_probs=247.1
Q ss_pred CCCCcCC---CcEEEEEccCCCCCCCcceEEEECCCCcEEeeccCCCCCCcCeEEEEEECCEEEEEccCC--C----Ccc
Q psy17309 38 IARPRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFD--G----NEY 108 (824)
Q Consensus 38 ~~~~r~~---~~~i~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~p~~R~~h~~~~~~~~~yv~GG~~--~----~~~ 108 (824)
..+||.. .+.||+|||. +++.||+.+++|.. .+++.|.||.+|++++++++||||||.. . ...
T Consensus 5 ~~~~r~~~~~~~~i~~~GG~-------~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 76 (318)
T 2woz_A 5 NDIPRHGMFVKDLILLVNDT-------AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPL 76 (318)
T ss_dssp CSSCCCCCSEEEEEEEECSS-------EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CC
T ss_pred cccccccceecchhhhcccc-------ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCc
Confidence 4456654 3699999992 48999999999998 4455568999999999999999999953 1 124
Q ss_pred cceEEEEEccCCceeEecccCCCcceeEEEEECCEEEEEcCcCC--CCCCCcEEEEECCCCeEEEeccccceeeccCCeE
Q psy17309 109 YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNG--QRRQNSVEKYNYTENQWSLIAPMNCMIQNVTYNI 186 (824)
Q Consensus 109 ~~~~~~~~~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~--~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~i 186 (824)
.+++++||+.+++|++++++|.+|..|++++++++|||+||.+. ...++++++||+.+++|+.+++++
T Consensus 77 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p---------- 146 (318)
T 2woz_A 77 QSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP---------- 146 (318)
T ss_dssp CBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS----------
T ss_pred cccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC----------
Confidence 56799999999999999999999999999999999999999863 344677777777777776554432
Q ss_pred EEEcccCCceeeceEEEEECCCCeEEEecccccCcceeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeec
Q psy17309 187 YVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLF 266 (824)
Q Consensus 187 ~v~GG~~~~~~~~~~~~~~~~~~~W~~i~~~~~~r~~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Y 266 (824)
T Consensus 147 -------------------------------------------------------------------------------- 146 (318)
T 2woz_A 147 -------------------------------------------------------------------------------- 146 (318)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceecCHhhHHHHHHHHhhcChHhHHHHHHHHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCchhh
Q psy17309 267 ERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEI 346 (824)
Q Consensus 267 t~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f 346 (824)
T Consensus 147 -------------------------------------------------------------------------------- 146 (318)
T 2woz_A 147 -------------------------------------------------------------------------------- 146 (318)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCHHHHHHHhcCCCcccCChHHHHHHHHHHHhcCccchHHHHHHhhhhccCCCCChHHHHhhccCCccccCCchhHHH
Q psy17309 347 VFISEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPI 426 (824)
Q Consensus 347 ~~L~~~~l~~ll~~d~L~v~~E~~v~~av~~W~~~~~~~r~~~~~~ll~~vr~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 426 (824)
T Consensus 147 -------------------------------------------------------------------------------- 146 (318)
T 2woz_A 147 -------------------------------------------------------------------------------- 146 (318)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhhhhhhccCCCCCCCCccCCCCCCCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEE
Q psy17309 427 IIETFKFLYDLELIAQIDGEVPTPEIARPRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAV 506 (824)
Q Consensus 427 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~ 506 (824)
.+|..|++++
T Consensus 147 ----------------------------------------------------------------------~~r~~~~~~~ 156 (318)
T 2woz_A 147 ----------------------------------------------------------------------IKVYGHNVIS 156 (318)
T ss_dssp ----------------------------------------------------------------------SCEESCEEEE
T ss_pred ----------------------------------------------------------------------CcccccEEEE
Confidence 2455566777
Q ss_pred ECCEEEEEeecC-CCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 507 IGYNIYVIGGFD-GNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 507 ~~~~lyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
.+++||++||.. +....+++++||+.+++|+.++++|.+|..|++++++++||++||.+.....+++++||+.+++|+.
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 888999999974 4456789999999999999999999999999999999999999998876677899999999999999
Q ss_pred ecCCCcccCceEEEEECCEEEEEcccCCC---------CcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEe
Q psy17309 586 IAPMNVERSDASATTLQGKIYITGGFNGH---------NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIG 656 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~~~~lyv~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 656 (824)
++++|.+|..|++++++++||++||.+.. ...+++++||+++++|+.+ +|.+|..|+++.++++||++.
T Consensus 237 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 237 MTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYASGASCLATRLNLFK 314 (318)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGTTCEEEEEEEEGGG
T ss_pred CCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccccccceeeCCEEEEEE
Confidence 99999999999999999999999998642 3478999999999999999 788999999999999999975
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=5.2e-39 Score=349.95 Aligned_cols=260 Identities=16% Similarity=0.189 Sum_probs=222.1
Q ss_pred cCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECC--CCceEEeccCC-CCcceEEEEEECCEEEEEecc-c--
Q psy17309 492 QVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAV--TKVWKEIAPMN-FKRCYVSTAVHQDVIYAMGGY-N-- 565 (824)
Q Consensus 492 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~-~-- 565 (824)
.+++|.+|.++++++++++|||+||.++ +++++||+. +++|+.++++| .+|..|++++++++||++||. .
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNS 78 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECT
T ss_pred CCCCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCC
Confidence 5678889999999999999999999764 479999998 49999999999 899999999999999999998 3
Q ss_pred --CCCCCCeEEEEeCCCCcEEeecCCC-cccCceEEEEECCEEEEEcccCCC----------------------------
Q psy17309 566 --GQRRQNSVEKYNYTENQWSLIAPMN-VERSDASATTLQGKIYITGGFNGH---------------------------- 614 (824)
Q Consensus 566 --~~~~~~~~~~yd~~t~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~---------------------------- 614 (824)
....++++++||+.+++|+.+++|+ .+|.+|++++++++|||+||.+..
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred CccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 2345789999999999999999988 999999999999999999998643
Q ss_pred ------CcCCceEEEeCCCCeEEEcCCCCCCCcc-eEEEEECCEEEEEecCCCC-CccceEEEEeC--CCCCEEECCCCC
Q psy17309 615 ------NCLNSCEVYDPECNQWTLIEPMRHRRSG-VSCIAYHECIYVIGGFNGM-SRMCNGEKYNP--VTKTWSQVPDMY 684 (824)
Q Consensus 615 ------~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~--~~~~W~~~~~~p 684 (824)
..++++++||+.+++|+.++++|.+|.. ++++.++++|||+||.+.. ...+++++||+ .+++|+.++++|
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~ 238 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVS 238 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSS
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCC
Confidence 2468999999999999999999987655 9999999999999996543 34678999986 899999999887
Q ss_pred CC--CcceEEEEECCEEEEEccCCCC-----------------ceeeEEEEEECCCCcEEeccCCCCCccceeEEEEcCc
Q psy17309 685 NP--RSNFAIEVIDDMIFAIGGFNGV-----------------TTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 745 (824)
Q Consensus 685 ~~--r~~~~~~~~~~~i~v~GG~~~~-----------------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 745 (824)
.+ |..+++++++++|||+||.+.. ..+.++++||+++++|+.++++|.+|..|++++++++
T Consensus 239 ~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 318 (357)
T 2uvk_A 239 SPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNS 318 (357)
T ss_dssp TTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTE
T ss_pred CCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCE
Confidence 66 4577799999999999996422 2346899999999999999999999999999999999
Q ss_pred cceecccccc
Q psy17309 746 PNVYDYIHQH 755 (824)
Q Consensus 746 ~~~~~~~~~~ 755 (824)
+|++++....
T Consensus 319 i~v~GG~~~~ 328 (357)
T 2uvk_A 319 LLIIGGETAG 328 (357)
T ss_dssp EEEEEEECGG
T ss_pred EEEEeeeCCC
Confidence 9999776543
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=5.1e-38 Score=342.15 Aligned_cols=269 Identities=16% Similarity=0.205 Sum_probs=223.4
Q ss_pred CCEEEEEccCCCCCCCceEEEEECC--CCcEEEcccCCCC-CCCceeEEEEECCEEEEEeec-C----CCcccceEEEEE
Q psy17309 459 HEILFAIGGWSGGSPTDFVETYDTR--ADRWVKIDQVDPM-GPRAYHGTAVIGYNIYVIGGF-D----GNEYYNSCRCFN 530 (824)
Q Consensus 459 ~~~l~~~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~-~~r~~~~~~~~~~~lyv~GG~-~----~~~~~~~~~~yd 530 (824)
.+.||++||... +++++||+. +++|.. .+++| .+|..|++++++++|||+||. . .....+++++||
T Consensus 19 ~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~--~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd 92 (357)
T 2uvk_A 19 NDTVYIGLGSAG----TAWYKLDTQAKDKKWTA--LAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYN 92 (357)
T ss_dssp TTEEEEECGGGT----TCEEEEETTSSSCCEEE--CCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEE
T ss_pred CCEEEEEeCcCC----CeEEEEccccCCCCeeE--CCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEe
Confidence 567999999753 479999998 499999 45677 799999999999999999998 3 234578999999
Q ss_pred CCCCceEEeccCC-CCcceEEEEEECCEEEEEecccCC----------------------------------CCCCeEEE
Q psy17309 531 AVTKVWKEIAPMN-FKRCYVSTAVHQDVIYAMGGYNGQ----------------------------------RRQNSVEK 575 (824)
Q Consensus 531 ~~~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~~~~----------------------------------~~~~~~~~ 575 (824)
+.+++|+.+++++ .+|..|++++.+++||++||.+.. ..++++++
T Consensus 93 ~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (357)
T 2uvk_A 93 PKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS 172 (357)
T ss_dssp TTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred CCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence 9999999999998 899999999999999999997632 24689999
Q ss_pred EeCCCCcEEeecCCCcccCc-eEEEEECCEEEEEcccCCC-CcCCceEEEeC--CCCeEEEcCCCCCC--CcceEEEEEC
Q psy17309 576 YNYTENQWSLIAPMNVERSD-ASATTLQGKIYITGGFNGH-NCLNSCEVYDP--ECNQWTLIEPMRHR--RSGVSCIAYH 649 (824)
Q Consensus 576 yd~~t~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~-~~~~~v~~yd~--~~~~W~~~~~~p~~--r~~~~~~~~~ 649 (824)
||+.+++|+.++++|.+|.. |++++++++|||+||.+.. ...+++++||+ ++++|+.++++|.+ |..|++++++
T Consensus 173 yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~ 252 (357)
T 2uvk_A 173 FDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISN 252 (357)
T ss_dssp EETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEET
T ss_pred EeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEEC
Confidence 99999999999999987655 9999999999999998643 35788999976 99999999988665 5578899999
Q ss_pred CEEEEEecCCC-----------------CCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCCc-ee
Q psy17309 650 ECIYVIGGFNG-----------------MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVT-TI 711 (824)
Q Consensus 650 ~~iyv~GG~~~-----------------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-~~ 711 (824)
++|||+||.+. ...+.++++||+.+++|+.++++|.+|..|+++.++++|||+||.+... .+
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 332 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAV 332 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEE
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEe
Confidence 99999999532 2234689999999999999999999999999999999999999987654 47
Q ss_pred eEEEEEECCCCcEEeccCCCCC
Q psy17309 712 YHVECYDEKTDEWYEATDMNIY 733 (824)
Q Consensus 712 ~~v~~yd~~~~~W~~~~~~p~~ 733 (824)
+++++|+.++++|....+.|..
T Consensus 333 ~~v~~l~~~~~~~~~~~~~~~~ 354 (357)
T 2uvk_A 333 TDSVLITVKDNKVTVQNLEHHH 354 (357)
T ss_dssp EEEEEEEC-CCSCEEEC-----
T ss_pred eeEEEEEEcCcEeEeeeccccc
Confidence 8999999999999998776643
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=1.8e-36 Score=356.40 Aligned_cols=222 Identities=17% Similarity=0.264 Sum_probs=174.7
Q ss_pred CCceeEEEEE-CCEEEEEee-cCCCcccceEEEEECCCCceEEe-----ccCCCCcceEEEEEECCEEEEEecccCC---
Q psy17309 498 PRAYHGTAVI-GYNIYVIGG-FDGNEYYNSCRCFNAVTKVWKEI-----APMNFKRCYVSTAVHQDVIYAMGGYNGQ--- 567 (824)
Q Consensus 498 ~r~~~~~~~~-~~~lyv~GG-~~~~~~~~~~~~yd~~~~~W~~~-----~~~~~~r~~~~~~~~~~~iyv~GG~~~~--- 567 (824)
+|..|+++++ +++||++|| .++....+++++||+.+++|+.+ .+|+.+|.. +++..++++|++||.++.
T Consensus 286 ~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~ 364 (656)
T 1k3i_A 286 ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQ 364 (656)
T ss_dssp CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEE
T ss_pred cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEE
Confidence 4556677777 889999999 45556778999999999999998 456666553 555679999999998643
Q ss_pred -CCCCeEEEEeCCCCcEEeec-CCCc------ccCceEEEE---ECCEEEEEcccCC---CCcCC---ceEEEeCCCCeE
Q psy17309 568 -RRQNSVEKYNYTENQWSLIA-PMNV------ERSDASATT---LQGKIYITGGFNG---HNCLN---SCEVYDPECNQW 630 (824)
Q Consensus 568 -~~~~~~~~yd~~t~~W~~~~-~~p~------~r~~~~~~~---~~~~lyv~GG~~~---~~~~~---~v~~yd~~~~~W 630 (824)
...++++.||+.++.|.... ..+. ++..++++. .+++|||+||.+. ...++ ++++||+.+++|
T Consensus 365 ~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W 444 (656)
T 1k3i_A 365 AGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPN 444 (656)
T ss_dssp CCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCE
T ss_pred ecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCe
Confidence 34689999999999987542 2222 234445553 4899999999643 23344 789999999999
Q ss_pred EEcC--CCCCCCcceEEEEE-CCEEEEEecCCC------CCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEE
Q psy17309 631 TLIE--PMRHRRSGVSCIAY-HECIYVIGGFNG------MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMI 699 (824)
Q Consensus 631 ~~~~--~~p~~r~~~~~~~~-~~~iyv~GG~~~------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 699 (824)
+.+. +||.+|..|+++.+ +++|||+||.+. .....++++||+.+++|+.++++|.+|..|+++++ +++|
T Consensus 445 ~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v 524 (656)
T 1k3i_A 445 TVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRV 524 (656)
T ss_dssp EEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCE
T ss_pred eEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEE
Confidence 9986 99999999999888 999999999642 34578899999999999999999999999998888 9999
Q ss_pred EEEccCCCC---ceeeEEEEEECC
Q psy17309 700 FAIGGFNGV---TTIYHVECYDEK 720 (824)
Q Consensus 700 ~v~GG~~~~---~~~~~v~~yd~~ 720 (824)
|++||.... ...-++++|.|.
T Consensus 525 ~v~GG~~~~~~~~~~~~~e~~~Pp 548 (656)
T 1k3i_A 525 FNGGGGLCGDCTTNHFDAQIFTPN 548 (656)
T ss_dssp EEEECCCCTTCSCCCCEEEEEECG
T ss_pred EecCCCCCCCCCCCeeEEEEEeCh
Confidence 999996322 123467888875
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.6e-37 Score=363.12 Aligned_cols=319 Identities=11% Similarity=0.087 Sum_probs=251.7
Q ss_pred HHhcCccchHHHHHHhhhhccCCCCChHHHHhhccCCccccCCc---hhHHHHHHHHHHhhhhhhhhccCCCCCCCCccC
Q psy17309 378 WIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTP---ECRPIIIETFKFLYDLELIAQIDGEVPTPEIAR 454 (824)
Q Consensus 378 W~~~~~~~r~~~~~~ll~~vr~~~~~~~~l~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (824)
|+.++...|.+.++.++++++++++.+.++.......+.+..++ .|.+.
T Consensus 315 ~~~~~e~~R~~~lE~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~---------------------------- 366 (695)
T 2zwa_A 315 SADEATKKELLKVEPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSI---------------------------- 366 (695)
T ss_dssp HSCHHHHHHHHHHSCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC------------------------------
T ss_pred hCCHHHHHHHHhccccchHHHHHHhhccEEEEEEecCCccccCcccCCCCcc----------------------------
Confidence 88888888999999999998888777766655444443332222 11000
Q ss_pred CCCCCCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCC
Q psy17309 455 PRVPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK 534 (824)
Q Consensus 455 ~r~~~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 534 (824)
... .+ -.....+|.. .+..|.+|.++ ++++++.|||+||..+ ...+++++||+.++
T Consensus 367 --~~~------------~~------~~~~~~~~~~--~~~~p~rr~g~-~~~~~~~iyv~GG~~~-~~~~~v~~yd~~~~ 422 (695)
T 2zwa_A 367 --SEI------------NL------TVDEDYQLLE--CECPINRKFGD-VDVAGNDVFYMGGSNP-YRVNEILQLSIHYD 422 (695)
T ss_dssp ----C------------CC------EECSSEEEEE--CCCTTCCBSCE-EEECSSCEEEECCBSS-SBCCCEEEEEECSS
T ss_pred --ccc------------cC------CCCCceeEec--cCCCCCCceeE-EEEECCEEEEECCCCC-CCcCcEEEEECCCC
Confidence 000 00 0112223443 33445555554 4448999999999877 77899999999999
Q ss_pred ceEEec-c-----CCCCcceEEEEEE--CCEEEEEecccCCC-CCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCE
Q psy17309 535 VWKEIA-P-----MNFKRCYVSTAVH--QDVIYAMGGYNGQR-RQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGK 604 (824)
Q Consensus 535 ~W~~~~-~-----~~~~r~~~~~~~~--~~~iyv~GG~~~~~-~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~ 604 (824)
+|+.++ + +|.+|.+|+++++ +++||++||.++.. .++++++||+.+++|+.+++||.+|.+|+++++ +++
T Consensus 423 ~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~ 502 (695)
T 2zwa_A 423 KIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGN 502 (695)
T ss_dssp CEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSC
T ss_pred eEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCE
Confidence 999998 5 7899999999999 99999999987644 689999999999999999999999999999997 999
Q ss_pred EEEEcccCCCCcCCceEEEeCCCCeEEEcCC---CCCCCcceEEEEEC---CEEEEEecCCCC--CccceEEEEeCCCCC
Q psy17309 605 IYITGGFNGHNCLNSCEVYDPECNQWTLIEP---MRHRRSGVSCIAYH---ECIYVIGGFNGM--SRMCNGEKYNPVTKT 676 (824)
Q Consensus 605 lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~---~~iyv~GG~~~~--~~~~~v~~yd~~~~~ 676 (824)
|||+||.+... ++++||+.+++|+.+++ +|.+|.+|++++++ ++|||+||.+.. ..++++++||+.+++
T Consensus 503 iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 503 VLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 99999987654 99999999999999986 89999999988876 899999997543 457899999999999
Q ss_pred ------EEECCCC-CCCCcceEEEEEC-CEEEEEccCCCCc---eeeEEEEEECCCCcEEeccCCCC--------Cccce
Q psy17309 677 ------WSQVPDM-YNPRSNFAIEVID-DMIFAIGGFNGVT---TIYHVECYDEKTDEWYEATDMNI--------YRSAL 737 (824)
Q Consensus 677 ------W~~~~~~-p~~r~~~~~~~~~-~~i~v~GG~~~~~---~~~~v~~yd~~~~~W~~~~~~p~--------~r~~~ 737 (824)
|+.+.++ +.+|..|++++++ ++|||+||.+... ..+++++||+.+++|+.+ ++|. .+.+|
T Consensus 580 w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~-~~p~~~~~~~~p~~~gh 658 (695)
T 2zwa_A 580 ATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSI-PISRRIWEDHSLMLAGF 658 (695)
T ss_dssp SSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEEC-CCCHHHHHHSCCCCSSC
T ss_pred cccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEe-eccccccCCCCccceee
Confidence 8998775 5899999999999 9999999986543 478899999999999965 2222 45678
Q ss_pred eEEEEcC-ccceeccc
Q psy17309 738 SACVIMG-LPNVYDYI 752 (824)
Q Consensus 738 ~~~~~~~-~~~~~~~~ 752 (824)
+++++++ ++|++++.
T Consensus 659 ~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 659 SLVSTSMGTIHIIGGG 674 (695)
T ss_dssp EEECC---CEEEECCE
T ss_pred eEEEeCCCEEEEEeCC
Confidence 8888877 88888653
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=3.1e-33 Score=328.45 Aligned_cols=259 Identities=15% Similarity=0.147 Sum_probs=220.2
Q ss_pred CCEEEEEccCCCCCCCceEEEEECCCCcEEEcc-c---CCCCCCCceeEEEEE--CCEEEEEeecCCCc-ccceEEEEEC
Q psy17309 459 HEILFAIGGWSGGSPTDFVETYDTRADRWVKID-Q---VDPMGPRAYHGTAVI--GYNIYVIGGFDGNE-YYNSCRCFNA 531 (824)
Q Consensus 459 ~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~-~---~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~-~~~~~~~yd~ 531 (824)
.+.|+++||... ...+++++||+.+++|..++ . ..+|.+|.+|+++++ +++|||+||.+... ..+++++||+
T Consensus 397 ~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 467999999877 77789999999999999976 3 248889999999999 99999999987644 6899999999
Q ss_pred CCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecC---CCcccCceEEEEEC---CE
Q psy17309 532 VTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP---MNVERSDASATTLQ---GK 604 (824)
Q Consensus 532 ~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~---~p~~r~~~~~~~~~---~~ 604 (824)
.+++|+.++++|.+|..|+++++ +++||++||.+... ++++||+.+++|+.+++ +|.+|.+|++++++ ++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 99999999999999999999997 99999999987554 89999999999999986 99999999988886 89
Q ss_pred EEEEcccCC--CCcCCceEEEeCCCCe------EEEcCCC-CCCCcceEEEEEC-CEEEEEecCCCCC---ccceEEEEe
Q psy17309 605 IYITGGFNG--HNCLNSCEVYDPECNQ------WTLIEPM-RHRRSGVSCIAYH-ECIYVIGGFNGMS---RMCNGEKYN 671 (824)
Q Consensus 605 lyv~GG~~~--~~~~~~v~~yd~~~~~------W~~~~~~-p~~r~~~~~~~~~-~~iyv~GG~~~~~---~~~~v~~yd 671 (824)
|||+||... ...++++++||+.+++ |+.+.++ +.+|.+|++++++ ++|||+||.+... ..+++++||
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 999999854 3567999999999999 9999876 5889999999999 9999999976543 478999999
Q ss_pred CCCCCEEECCCC-------CCCCcceEEEEECC-EEEEEccCC----CCceeeEEEEEECCC
Q psy17309 672 PVTKTWSQVPDM-------YNPRSNFAIEVIDD-MIFAIGGFN----GVTTIYHVECYDEKT 721 (824)
Q Consensus 672 ~~~~~W~~~~~~-------p~~r~~~~~~~~~~-~i~v~GG~~----~~~~~~~v~~yd~~~ 721 (824)
+.+++|+.++-. +..+.+|+++++++ +|||+||.. -+...+.+|.+|..+
T Consensus 633 ~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 633 PLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp TTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred CCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 999999976321 12456788888766 999999953 234556788887654
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=9.7e-34 Score=333.08 Aligned_cols=287 Identities=16% Similarity=0.198 Sum_probs=231.6
Q ss_pred CCEEEEEccCCCCC------CCceEEEEECCCCcEEEcccCCCCCCCcee--EEEE-ECCEEEEEeecCCCcccceEEEE
Q psy17309 459 HEILFAIGGWSGGS------PTDFVETYDTRADRWVKIDQVDPMGPRAYH--GTAV-IGYNIYVIGGFDGNEYYNSCRCF 529 (824)
Q Consensus 459 ~~~l~~~GG~~~~~------~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~--~~~~-~~~~lyv~GG~~~~~~~~~~~~y 529 (824)
.+.|+++||..... ....+++||+.+++|..++. ++.+|..+ ++++ .+++||++||.+. .++++|
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~--~~~~~~~~~~~~~~~~~g~lyv~GG~~~----~~v~~y 270 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV--TVTKHDMFCPGISMDGNGQIVVTGGNDA----KKTSLY 270 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE--EECSCCCSSCEEEECTTSCEEEECSSST----TCEEEE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc--cCCCCCCccccccCCCCCCEEEeCCCCC----CceEEe
Confidence 46899999975432 23478999999999998543 44444443 4444 4899999999754 379999
Q ss_pred ECCCCceEEeccCCCCcceEEEEEE-CCEEEEEec-ccCCCCCCeEEEEeCCCCcEEee-----cCCCcccCceEEEEEC
Q psy17309 530 NAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGG-YNGQRRQNSVEKYNYTENQWSLI-----APMNVERSDASATTLQ 602 (824)
Q Consensus 530 d~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG-~~~~~~~~~~~~yd~~t~~W~~~-----~~~p~~r~~~~~~~~~ 602 (824)
|+.+++|..+++|+.+|..|+++++ +++||++|| .++...++++++||+.+++|+.+ .+|+..|.. +++..+
T Consensus 271 d~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~ 349 (656)
T 1k3i_A 271 DSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSD 349 (656)
T ss_dssp EGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTT
T ss_pred cCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecC
Confidence 9999999999999999999999999 999999999 45556788999999999999997 566666654 556679
Q ss_pred CEEEEEcccCCC----CcCCceEEEeCCCCeEEEcC-CCCC------CCcceEEEE---ECCEEEEEecCCC---CCccc
Q psy17309 603 GKIYITGGFNGH----NCLNSCEVYDPECNQWTLIE-PMRH------RRSGVSCIA---YHECIYVIGGFNG---MSRMC 665 (824)
Q Consensus 603 ~~lyv~GG~~~~----~~~~~v~~yd~~~~~W~~~~-~~p~------~r~~~~~~~---~~~~iyv~GG~~~---~~~~~ 665 (824)
+++|++||.++. ...++++.||+.+++|.... ..+. ++..++++. .+++||++||.+. ...++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 999999998754 34688999999999987543 2221 234455553 4899999999642 22344
Q ss_pred ---eEEEEeCCCCCEEECC--CCCCCCcceEEEEE-CCEEEEEccCCC------CceeeEEEEEECCCCcEEeccCCCCC
Q psy17309 666 ---NGEKYNPVTKTWSQVP--DMYNPRSNFAIEVI-DDMIFAIGGFNG------VTTIYHVECYDEKTDEWYEATDMNIY 733 (824)
Q Consensus 666 ---~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~-~~~i~v~GG~~~------~~~~~~v~~yd~~~~~W~~~~~~p~~ 733 (824)
.+++||+.+++|+.+. +||.+|..++++++ +++|||+||.+. .....++++|||++++|+.++++|.+
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~ 509 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV 509 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence 7899999999999986 99999999999888 999999999752 24567899999999999999999999
Q ss_pred ccceeEEEE--cCccceeccc
Q psy17309 734 RSALSACVI--MGLPNVYDYI 752 (824)
Q Consensus 734 r~~~~~~~~--~~~~~~~~~~ 752 (824)
|..|+++++ +++++++++.
T Consensus 510 R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCTTEEEEECTTSCEEEEECC
T ss_pred cccccHhhcCCCcEEEecCCC
Confidence 999999988 9999998764
No 19
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.97 E-value=1.6e-32 Score=285.96 Aligned_cols=218 Identities=19% Similarity=0.340 Sum_probs=202.3
Q ss_pred ccCcceeeeeeecceEEEE-cccccccccceeEEe------eecccchhhhheeecccceecCHhhHHHHHHHHhhcChH
Q psy17309 218 NFKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKY------NYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMS 290 (824)
Q Consensus 218 ~~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~------~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~ 290 (824)
..+.|+..+++++.+|.+| .+.+.|+.+..|+++ ++++++|+.+++|+|||++.++.+++.+|+.+|++|+++
T Consensus 46 ~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~ 125 (279)
T 3i3n_A 46 EFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLI 125 (279)
T ss_dssp EEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCH
T ss_pred EEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcH
Confidence 3567778888999999998 677888999999999 899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCchhhhcCCHHHHHHHhcCCCcccCChHH
Q psy17309 291 KAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEET 370 (824)
Q Consensus 291 ~l~~~c~~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f~~L~~~~l~~ll~~d~L~v~~E~~ 370 (824)
.|++.|++||.+.++++||+.++.+|+.|++..|.+.|.+|+.+||.++. .+++|++|+.+.+..+|++|.|++.+|+.
T Consensus 126 ~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~-~~~~f~~L~~~~l~~lL~~d~L~v~sE~~ 204 (279)
T 3i3n_A 126 RLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVI-QDEEFYTLPFHLIRDWLSDLEITVDSEEV 204 (279)
T ss_dssp HHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHT-TSSGGGGSCHHHHHHHHTCSSCCCSCHHH
T ss_pred HHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh-cCcChhcCCHHHHHHHhcCcCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999 78899999999999999999999999999
Q ss_pred HHHHHHHHHhcCccchHHHHHHhhhhccCCCCChHHHHhhccCCccccCCchhHHHHHHHHHHhhh
Q psy17309 371 VWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTPECRPIIIETFKFLYD 436 (824)
Q Consensus 371 v~~av~~W~~~~~~~r~~~~~~ll~~vr~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 436 (824)
||+++++|+++++++|.+++.+||++|||++|+++++.+.+...+++..++.|.+++.++++++..
T Consensus 205 vf~av~~W~~~~~~~r~~~~~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~ 270 (279)
T 3i3n_A 205 LFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHAL 270 (279)
T ss_dssp HHHHHHHHHHTTHHHHTTTHHHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999999999999998864
No 20
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=2.9e-32 Score=280.38 Aligned_cols=210 Identities=25% Similarity=0.427 Sum_probs=178.0
Q ss_pred ccCcceeeeeeecceEEEE-ccccc--ccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHH
Q psy17309 218 NFKRCYVSTAVHQDVIYAM-GGYNG--QRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQD 294 (824)
Q Consensus 218 ~~~r~~~~~~~~~~~~~~~-~g~~~--e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~ 294 (824)
..+.|+..+++++.+|++| .+.+. ++.+..|+++++++++|+.+++|+|||++.++.+++.+++.+|++|+++.|++
T Consensus 42 ~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~ 121 (256)
T 3hve_A 42 EIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKT 121 (256)
T ss_dssp EEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHH
T ss_pred EEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHH
Confidence 4577788888899999988 45554 67788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCchhhhcCCHHHHHHHhcCCCcccCChHHHHHH
Q psy17309 295 LCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETVWEL 374 (824)
Q Consensus 295 ~c~~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f~~L~~~~l~~ll~~d~L~v~~E~~v~~a 374 (824)
.|++||.+.++++||+.++.+|+.|++.+|.+.|.+|+.+||.++. .+++|.+|+.+.+..+|++|.|+|.+|+.||++
T Consensus 122 ~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~-~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~a 200 (256)
T 3hve_A 122 LCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVS-STEEFLELSPQKLKEVISLEKLNVGNERYVFEA 200 (256)
T ss_dssp HHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-TCHHHHSSCHHHHHHHHHCC-------CTTHHH
T ss_pred HHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh-CCcchhcCCHHHHHHHHccCCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 788999999999999999999999999999999
Q ss_pred HHHHHhcCccchHHHHHHhhhhccCCCCChHHHHhhccCCccccCC-chhHHHHH
Q psy17309 375 IIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQST-PECRPIII 428 (824)
Q Consensus 375 v~~W~~~~~~~r~~~~~~ll~~vr~~~~~~~~l~~~~~~~~~~~~~-~~~~~~i~ 428 (824)
+++|++|++++|.+++.+||++|||+++++.++.+.+..++++... ++|++++.
T Consensus 201 v~~W~~~~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 201 VIRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQMLNEPLVREIVKECSNIPL 255 (256)
T ss_dssp HTTTCCC--CCSTTTHHHHHHHHHHHTTCC-CHHHHHHTSTTHHHHHCC------
T ss_pred HHHHHHcCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhcChHHHhhHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988 78988764
No 21
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=1.6e-18 Score=149.66 Aligned_cols=96 Identities=20% Similarity=0.328 Sum_probs=92.1
Q ss_pred HhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCchhhhcCCHHHHHHHhcCCCcccCChHHHHHHHHHHH
Q psy17309 300 IKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWI 379 (824)
Q Consensus 300 l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f~~L~~~~l~~ll~~d~L~v~~E~~v~~av~~W~ 379 (824)
++++++++||+.++.+|+.|++++|.++|.+|+.+||.+++ ++++|++|+.++|..+|++| +.+|+.||+|+++|+
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~-~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv 79 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQ-NTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWI 79 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHH-TSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH-hcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999 78999999999999999998 889999999999999
Q ss_pred hcCccchHHHHHHhhhhccC
Q psy17309 380 DYDPENRKKHIVSLMKNIRL 399 (824)
Q Consensus 380 ~~~~~~r~~~~~~ll~~vr~ 399 (824)
+||+++|.+++++||++||.
T Consensus 80 ~~d~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 80 NFNKEEREAFAESLRTSLKE 99 (105)
T ss_dssp HTTHHHHHHHHHHHHHHCCE
T ss_pred HcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999995
No 22
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.63 E-value=7e-17 Score=154.95 Aligned_cols=123 Identities=20% Similarity=0.182 Sum_probs=112.1
Q ss_pred cCcceeeeeeecceEEEE-cccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCC 297 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~ 297 (824)
.+.|+..+++++.+|..| .+.+.|..+..|+++++++++|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|+
T Consensus 46 ~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~ 125 (172)
T 3htm_A 46 FQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCE 125 (172)
T ss_dssp EEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHH
T ss_pred EEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 566777888889999888 6667888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHc
Q psy17309 298 DFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVAR 341 (824)
Q Consensus 298 ~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~ 341 (824)
+||.+.++.+||+.++.+|+.|++.+|++.|.+||.+||.++.+
T Consensus 126 ~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~ 169 (172)
T 3htm_A 126 DALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLE 169 (172)
T ss_dssp HHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-----
T ss_pred HHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999873
No 23
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.52 E-value=2e-15 Score=159.69 Aligned_cols=123 Identities=20% Similarity=0.184 Sum_probs=108.5
Q ss_pred ccCcceeeeeeecceEEEE-cccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHH
Q psy17309 218 NFKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLC 296 (824)
Q Consensus 218 ~~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c 296 (824)
..+.|+..+++++.+|.+| .+.+.|+.+.+|+++++++++|+.+|+|+||+++.++.+++.+|+.+|++|+++.|++.|
T Consensus 185 ~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c 264 (312)
T 3hqi_A 185 EFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMC 264 (312)
T ss_dssp EEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred EEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHHHHHHH
Confidence 3567777888889999888 677888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Q psy17309 297 CDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVA 340 (824)
Q Consensus 297 ~~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~ 340 (824)
+++|.+.++.+||+.++.+|+.|++..|+++|.+||..||.+|.
T Consensus 265 ~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~ 308 (312)
T 3hqi_A 265 EDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVL 308 (312)
T ss_dssp HHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC----
T ss_pred HHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999887
No 24
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.38 E-value=9.7e-15 Score=135.54 Aligned_cols=108 Identities=19% Similarity=0.186 Sum_probs=74.3
Q ss_pred cCcceeeeeeecceEEEE-cccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCC 297 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~ 297 (824)
.+.|+..+++++.+|..| .+.+.|+.+..|+++++++++|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|+
T Consensus 37 ~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~ 116 (145)
T 4eoz_A 37 FQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCE 116 (145)
T ss_dssp EEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHH
T ss_pred EEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 466777788888888888 5667788889999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCcchHHHHHHHHHHcCCHHHHH
Q psy17309 298 DFIKRLTTPRNCFGILLFSRDHFCKKLEE 326 (824)
Q Consensus 298 ~~l~~~l~~~N~~~i~~~a~~~~~~~L~~ 326 (824)
+||.+.++.+||+.++.+|+.|++.+|++
T Consensus 117 ~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 117 DALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp CC---------------------------
T ss_pred HHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 99999999999999999999999998864
No 25
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.05 E-value=1.3e-11 Score=107.95 Aligned_cols=86 Identities=17% Similarity=0.232 Sum_probs=73.0
Q ss_pred ccCcceeeeeeecceEEEE-cccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHH
Q psy17309 218 NFKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLC 296 (824)
Q Consensus 218 ~~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c 296 (824)
..+.|+..+++++.+|.+| .+.+.|+. ..|+++++++++|+.+|+|+|||++.++.+|+.+|+.+|++|+++.|++.|
T Consensus 23 ~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~L~~~c 101 (109)
T 2vkp_A 23 TVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPALAKAC 101 (109)
T ss_dssp EEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred EEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHHHHHHH
Confidence 3566777788888888888 66667777 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcC
Q psy17309 297 CDFIKRLT 304 (824)
Q Consensus 297 ~~~l~~~l 304 (824)
.+||.+++
T Consensus 102 ~~~l~~~l 109 (109)
T 2vkp_A 102 VNFLETSL 109 (109)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhhC
Confidence 99998764
No 26
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.03 E-value=2.8e-11 Score=106.92 Aligned_cols=77 Identities=9% Similarity=0.056 Sum_probs=65.8
Q ss_pred eeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHHHHHhh
Q psy17309 225 STAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 302 (824)
Q Consensus 225 ~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~ 302 (824)
.+.+|+.++.+.+.||.. .+..|+++++++++|+.+|+|+|||++.++.+|+++|+.+|++||++.|++.|+++++.
T Consensus 41 ~f~aHk~vLaa~S~yF~~-~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 41 EFPAHSLVLAGVSQQLGR-RGQWALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EEEECHHHHHTTCGGGCC-CEEEECCSSCCHHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred EEeeEHHHHHHcCHHHhc-CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 345666666666666654 56789999999999999999999999999999999999999999999999999998875
No 27
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.97 E-value=3.8e-11 Score=106.96 Aligned_cols=84 Identities=14% Similarity=0.154 Sum_probs=72.1
Q ss_pred ccCcceeeeeeecceEEEE-cccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHH
Q psy17309 218 NFKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLC 296 (824)
Q Consensus 218 ~~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c 296 (824)
..+.|+..+++++.+|.+| .+.+.|+.+..|+++++++++|+.+++|+|||++.++.+++.+|+.+|++|+++.|++.|
T Consensus 36 ~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C 115 (120)
T 2if5_A 36 EFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVC 115 (120)
T ss_dssp EEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHH
T ss_pred EEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 3566777788888888887 666778888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q psy17309 297 CDFIK 301 (824)
Q Consensus 297 ~~~l~ 301 (824)
++||.
T Consensus 116 ~~~L~ 120 (120)
T 2if5_A 116 ADLLD 120 (120)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99984
No 28
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=98.97 E-value=3.3e-11 Score=110.12 Aligned_cols=89 Identities=16% Similarity=0.168 Sum_probs=75.8
Q ss_pred ccCcceeeeeeecceEEEE-cccccccccceeEEe-eecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHH
Q psy17309 218 NFKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKY-NYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDL 295 (824)
Q Consensus 218 ~~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~-~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~ 295 (824)
..+.|+..+++++.+|.+| .+.+.+ ...|.++ ++++++|+.+|+|+|||++.++.+|+.+|+.+|++|+++.|++.
T Consensus 47 ~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~ 124 (138)
T 2z8h_A 47 RFRAHRSVLAACSSYFHSRIVGQTDA--ELTVTLPEEVTVKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEES 124 (138)
T ss_dssp EEEECHHHHHHHCHHHHHHHTTCCCT--TEEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHH
T ss_pred EEechHHHHHHcCHHHHHHHhcCCCC--CceEEeCCCCCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHH
Confidence 3456666677777777776 344433 3578885 89999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCcch
Q psy17309 296 CCDFIKRLTTPRN 308 (824)
Q Consensus 296 c~~~l~~~l~~~N 308 (824)
|++||.++++.+|
T Consensus 125 C~~~l~~~l~~sn 137 (138)
T 2z8h_A 125 CFQFLKFKFLDST 137 (138)
T ss_dssp HHHHTTCCCSCCC
T ss_pred HHHHHHHhccccc
Confidence 9999999999887
No 29
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.94 E-value=6.6e-11 Score=106.51 Aligned_cols=85 Identities=14% Similarity=0.255 Sum_probs=75.5
Q ss_pred ccCcceeeeeeecceEEEE-cccccccccceeEE-eeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHH
Q psy17309 218 NFKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEK-YNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDL 295 (824)
Q Consensus 218 ~~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l-~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~ 295 (824)
..+.|+..+++++.+|.+| .+.+.| .+..|++ +++++++|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.
T Consensus 40 ~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~ 118 (127)
T 1r29_A 40 QFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDT 118 (127)
T ss_dssp EEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHH
T ss_pred EEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHH
Confidence 4566777788888888888 555666 7789999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc
Q psy17309 296 CCDFIKRL 303 (824)
Q Consensus 296 c~~~l~~~ 303 (824)
|++||.++
T Consensus 119 c~~~l~~~ 126 (127)
T 1r29_A 119 CRKFIKAS 126 (127)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhc
Confidence 99999764
No 30
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.91 E-value=5.2e-11 Score=108.23 Aligned_cols=85 Identities=19% Similarity=0.187 Sum_probs=65.9
Q ss_pred cCcceeeeeeecceEEEE-cccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCC 297 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~ 297 (824)
.+.|+..+++++.+|.+| .+.+ +..|+++++++++|+.+|+|||||++.++.+|+.+|+.+|++|+++.|++.|+
T Consensus 37 f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~ 112 (135)
T 2yy9_A 37 FKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPEAVELCQ 112 (135)
T ss_dssp EEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHH
T ss_pred EehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 445555566666666665 2222 67899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCcc
Q psy17309 298 DFIKRLTTPR 307 (824)
Q Consensus 298 ~~l~~~l~~~ 307 (824)
+||.+.+...
T Consensus 113 ~~l~~~l~~~ 122 (135)
T 2yy9_A 113 SFQPQTSVGQ 122 (135)
T ss_dssp HCCC------
T ss_pred HHHHHhccCC
Confidence 9999887644
No 31
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.89 E-value=7.8e-11 Score=104.56 Aligned_cols=81 Identities=20% Similarity=0.197 Sum_probs=67.1
Q ss_pred cCcceeeeeeecceEEEE-cccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCC 297 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~ 297 (824)
.+.|+..+++++.+|.+| .+. .+..|+++++++++|+.+|+|+|||++.++.+|+.+|+.+|++|+++.|++.|+
T Consensus 36 f~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~ 111 (119)
T 3b84_A 36 FKAHWSVLACCSHFFQSLYGDG----SGGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPEAVELCQ 111 (119)
T ss_dssp EEECHHHHHHHCHHHHHHHTTT----TCCCEEECGGGHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHH
T ss_pred EEeeHHHHhhcCHHHHHHHCCC----CCCeEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 455556666667777666 222 267899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q psy17309 298 DFIKRL 303 (824)
Q Consensus 298 ~~l~~~ 303 (824)
+||.+.
T Consensus 112 ~~l~~~ 117 (119)
T 3b84_A 112 SFKPKT 117 (119)
T ss_dssp HCC---
T ss_pred HHHHHc
Confidence 998764
No 32
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.85 E-value=1e-10 Score=107.47 Aligned_cols=84 Identities=14% Similarity=0.229 Sum_probs=71.0
Q ss_pred ccCcceeeeeeecceEEEE-cccccc--cccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHH
Q psy17309 218 NFKRCYVSTAVHQDVIYAM-GGYNGQ--RRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQD 294 (824)
Q Consensus 218 ~~~r~~~~~~~~~~~~~~~-~g~~~e--~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~ 294 (824)
..+.++..+++.+.+|.+| .+.+.+ +.+..|.++++++++|+.+|+|+|||++.++.+|+.+|+.+|++|+++.|++
T Consensus 58 ~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~ 137 (144)
T 2ppi_A 58 EIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKT 137 (144)
T ss_dssp EEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHH
T ss_pred EEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHH
Confidence 3466667777888888877 444443 6778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q psy17309 295 LCCDFIK 301 (824)
Q Consensus 295 ~c~~~l~ 301 (824)
.|++||+
T Consensus 138 ~C~~~L~ 144 (144)
T 2ppi_A 138 LCCEFLE 144 (144)
T ss_dssp HHHTTC-
T ss_pred HHHHHhC
Confidence 9999874
No 33
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.85 E-value=2.8e-10 Score=101.27 Aligned_cols=82 Identities=10% Similarity=0.148 Sum_probs=67.7
Q ss_pred cCcceeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCCD 298 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~ 298 (824)
.+.|+..+++++.+|.+|-. ..+..|+++++++++|+.+++|+|||++.++.+|+.+++.+|++|+++.|++.|++
T Consensus 40 f~aHk~vLaa~S~yF~~~f~----~~~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~ 115 (121)
T 1buo_A 40 FHAHRTVLACTSKMFEILFH----RNSQHYTLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLK 115 (121)
T ss_dssp EEECHHHHHHHCHHHHHHTT----SCCSEEEECSSCHHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHH
T ss_pred EehhHHHHhhcCHHHHHHHc----CCCcEEEeCCCCHHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 34455555555666555521 13568999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcC
Q psy17309 299 FIKRLT 304 (824)
Q Consensus 299 ~l~~~l 304 (824)
||.+.+
T Consensus 116 ~l~~~I 121 (121)
T 1buo_A 116 MLETIQ 121 (121)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998643
No 34
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.83 E-value=2.1e-10 Score=101.29 Aligned_cols=80 Identities=15% Similarity=0.111 Sum_probs=67.2
Q ss_pred cCcceeeeeeecceEEEE-cccccccccceeEEe--eecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKY--NYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDL 295 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~--~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~ 295 (824)
.+.|+..+++++.+|.+| .+. .+..|+++ ++++++|+.+|+|+|||++.++.+|+.+|+.+|++|+++.|++.
T Consensus 34 ~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~ 109 (116)
T 2vpk_A 34 FKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTK 109 (116)
T ss_dssp EEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHH
T ss_pred EeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHHHHHH
Confidence 455556666667776666 222 36778888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHhh
Q psy17309 296 CCDFIKR 302 (824)
Q Consensus 296 c~~~l~~ 302 (824)
|++||++
T Consensus 110 C~~~l~~ 116 (116)
T 2vpk_A 110 CKIKMED 116 (116)
T ss_dssp HHHHHC-
T ss_pred HHHHHhC
Confidence 9999863
No 35
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=98.75 E-value=3.7e-10 Score=100.13 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=63.8
Q ss_pred CcceeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHHHH
Q psy17309 220 KRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCCDF 299 (824)
Q Consensus 220 ~r~~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~ 299 (824)
+.|+..+++++.+|.+|.. ..+..|.++++++++|+.+|+|+|||++.++.+|+.+|+.+|++|+++.|++.|++|
T Consensus 40 ~aHk~vLaa~S~yF~~~f~----~~~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~ 115 (119)
T 2q81_A 40 KAHKAVLAACSEYFKMLFV----DQKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHAL 115 (119)
T ss_dssp EECHHHHHHHCHHHHHHHH----HCCSGGGGGGCCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ehhHHHHHHcCHHHHHHHc----CCCCEEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4444455555555555411 135678888999999999999999999999999999999999999999999999999
Q ss_pred Hh
Q psy17309 300 IK 301 (824)
Q Consensus 300 l~ 301 (824)
|.
T Consensus 116 l~ 117 (119)
T 2q81_A 116 KS 117 (119)
T ss_dssp HT
T ss_pred Hh
Confidence 86
No 36
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.73 E-value=1.9e-10 Score=103.68 Aligned_cols=83 Identities=12% Similarity=0.124 Sum_probs=61.4
Q ss_pred cCcceeeeeeecceEEEEcccccccccceeEEe-eecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKY-NYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCC 297 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~~g~~~e~~~~~i~l~-~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~ 297 (824)
.+.|+..+++++.+|.+|... ..+..|+++ ++++++|+.+|+|+|||++.++.+|+.+|+.+|++|+++.|++.|+
T Consensus 45 ~~~Hk~vLaa~S~~F~~~f~~---~~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~ 121 (129)
T 3ga1_A 45 FKAHRAVLAASSSYFRDLFNN---SRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGT 121 (129)
T ss_dssp EEECHHHHHHHBHHHHHHHHH---CCCSEEECCTTCCHHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC--
T ss_pred EEehHHHHHHcCHHHHHHHcC---CCCCEEEECCCCCHHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 345555666666666665111 166789997 9999999999999999999999999999999999999999999999
Q ss_pred HHHhhcC
Q psy17309 298 DFIKRLT 304 (824)
Q Consensus 298 ~~l~~~l 304 (824)
+||.+..
T Consensus 122 ~~L~~~~ 128 (129)
T 3ga1_A 122 EFFLKVS 128 (129)
T ss_dssp -------
T ss_pred HHHHHhc
Confidence 9998753
No 37
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.69 E-value=1.5e-10 Score=103.78 Aligned_cols=80 Identities=16% Similarity=0.245 Sum_probs=68.2
Q ss_pred cCcceeeeeeecceEEEE-cccccccccceeEEee-ecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKYN-YTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLC 296 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~~-~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c 296 (824)
.+.|+..+++++.+|.+| .+.+.+ +..|.+++ +++++|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|
T Consensus 44 f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C 121 (125)
T 3ohu_A 44 FRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSC 121 (125)
T ss_dssp EEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSS
T ss_pred EechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHH
Confidence 456666777777777777 343433 67899998 99999999999999999999999999999999999999999999
Q ss_pred HHHH
Q psy17309 297 CDFI 300 (824)
Q Consensus 297 ~~~l 300 (824)
++||
T Consensus 122 ~~~L 125 (125)
T 3ohu_A 122 FSFL 125 (125)
T ss_dssp CCCC
T ss_pred HHhC
Confidence 8764
No 38
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=98.63 E-value=2.8e-10 Score=101.76 Aligned_cols=81 Identities=15% Similarity=0.203 Sum_probs=66.3
Q ss_pred cCcceeeeeeecceEEEE-cccccccccceeEEe-eecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAM-GGYNGQRRQNSVEKY-NYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLC 296 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~-~g~~~e~~~~~i~l~-~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c 296 (824)
.+.|+..+++++.+|.+| .+.+.+ +..|+++ ++++++|+.+|+|+|||++.++.+|+.+|+.+|++|+++.|++.|
T Consensus 41 ~~aHk~vLaa~S~yF~~mf~~~~~e--~~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C 118 (124)
T 2ihc_A 41 FRAHRSVLAACSSYFHSRIVGQADG--ELNITLPEEVTVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESC 118 (124)
T ss_dssp EEECHHHHHHHBHHHHHHHTTC-----CEEEECCTTSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGG
T ss_pred EecHHHHHHHcCHHHHHHHcCCCCC--CceEeecCCcCHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHH
Confidence 456666677777777776 444433 3578884 899999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q psy17309 297 CDFIK 301 (824)
Q Consensus 297 ~~~l~ 301 (824)
++||+
T Consensus 119 ~~~l~ 123 (124)
T 2ihc_A 119 FQFLK 123 (124)
T ss_dssp GGTC-
T ss_pred HHHHh
Confidence 99875
No 39
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.39 E-value=0.00035 Score=73.66 Aligned_cols=226 Identities=8% Similarity=-0.098 Sum_probs=138.5
Q ss_pred CCceEEEEECCCCcEEEcc---cCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCce-EEeccCCCCcce
Q psy17309 473 PTDFVETYDTRADRWVKID---QVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVW-KEIAPMNFKRCY 548 (824)
Q Consensus 473 ~~~~~~~yd~~~~~W~~~~---~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~r~~ 548 (824)
....+..+|+.+.++...- ....+.......++..++++|+.... .+.+.++|+.+.+- ..++.... -
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~~~---p 86 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGFTS---P 86 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECCSS---E
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCCCC---C
Confidence 3578999999999886521 01223334456677789999999752 36799999998876 34543322 2
Q ss_pred EEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcc----cCceEEEEECCEEEEEcccCCCCcCCceEEE
Q psy17309 549 VSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE----RSDASATTLQGKIYITGGFNGHNCLNSCEVY 623 (824)
Q Consensus 549 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~----r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~y 623 (824)
..++. .++++|+.... .+.+.++|+.+.+-...-+.+.. .....++..++++||..- ...+.+.++
T Consensus 87 ~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~----~~~~~v~vi 157 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW----SYQNRILKI 157 (328)
T ss_dssp EEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC----TTCCEEEEE
T ss_pred cEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC----CCCCEEEEE
Confidence 34444 68899998742 36899999999875432111110 022344557899999842 113679999
Q ss_pred eCCCCeEEEcCCCCCCCcceEEEE-ECCEEEEEecCCCCCc-----cceEEEEeCCCCCEEECCCCCCCCcceEEEEE--
Q psy17309 624 DPECNQWTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMSR-----MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-- 695 (824)
Q Consensus 624 d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~-----~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 695 (824)
|+.+++....-+.. ..-..++. -+|++|+......... ...+.++|+.+.+....-.++....-..++.-
T Consensus 158 D~~t~~~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d 235 (328)
T 3dsm_A 158 DTETDKVVDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGT 235 (328)
T ss_dssp ETTTTEEEEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTT
T ss_pred ECCCCeEEEEEEcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecC
Confidence 99998764432211 11122222 3688888764221111 36899999998876533233322223344444
Q ss_pred CCEEEEEccCCCCceeeEEEEEECCCCcEE
Q psy17309 696 DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 725 (824)
Q Consensus 696 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (824)
++.+|+..+ .++++|+++.+..
T Consensus 236 ~~~lyv~~~--------~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 236 RDTLYWINN--------DIWRMPVEADRVP 257 (328)
T ss_dssp SCEEEEESS--------SEEEEETTCSSCC
T ss_pred CCEEEEEcc--------EEEEEECCCCcee
Confidence 567888754 6889999987753
No 40
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.35 E-value=5.6e-08 Score=90.35 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=70.2
Q ss_pred eeecceEEEE-cc-ccc-ccccceeEEeeecccchhhhheeecccc--------------------------eecCHhhH
Q psy17309 227 AVHQDVIYAM-GG-YNG-QRRQNSVEKYNYTENQDKIEEKKLFERK--------------------------LHITEDNV 277 (824)
Q Consensus 227 ~~~~~~~~~~-~g-~~~-e~~~~~i~l~~~~~~~~~~ll~~~Yt~~--------------------------l~l~~~~v 277 (824)
+..+.+|..| .+ .+. |..+..|.++++++.+++.+++|+|+.. +.++.+++
T Consensus 20 A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~~~l 99 (159)
T 2ast_A 20 AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTL 99 (159)
T ss_dssp HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCHHHH
T ss_pred HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCHHHH
Confidence 5667777777 22 334 6777899999999999999999999988 88999999
Q ss_pred HHHHHHHhhcChHhHHHHHHHHHhhcCCcchHHHH
Q psy17309 278 ASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGI 312 (824)
Q Consensus 278 ~~ll~~a~~~~i~~l~~~c~~~l~~~l~~~N~~~i 312 (824)
.+|+.||++|+|..|++.|++|+...+...++-+|
T Consensus 100 ~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eei 134 (159)
T 2ast_A 100 FELILAANYLDIKGLLDVTCKTVANMIKGKTPEEI 134 (159)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 99999999999999999999999988877776544
No 41
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=98.31 E-value=4.4e-08 Score=86.05 Aligned_cols=72 Identities=8% Similarity=0.018 Sum_probs=58.9
Q ss_pred cCcceeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccce-ecCHhhHHHHHHHHhhcChHhHHH
Q psy17309 219 FKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKL-HITEDNVASLLLATDFFCMSKAQD 294 (824)
Q Consensus 219 ~~r~~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l-~l~~~~v~~ll~~a~~~~i~~l~~ 294 (824)
.+.|+..+++++.+|.+|... .+..|+++++++++|+.+++|+|||++ .++.+++.+++.+|++|+++.|++
T Consensus 43 f~aHk~vLaa~S~~F~~~f~~----~~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 43 FRAHKNILSASSTYFHQLFSV----AGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp EEECHHHHHHHCHHHHHHTTS----CCSEEEECSSCHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred EehhHHHHHHcCHHHHHHHcC----CCCEEEeCCCCHHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 445555566666666655211 267899999999999999999999999 799999999999999999999874
No 42
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.07 E-value=0.0014 Score=64.58 Aligned_cols=184 Identities=13% Similarity=0.068 Sum_probs=123.1
Q ss_pred ceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCC
Q psy17309 500 AYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYT 579 (824)
Q Consensus 500 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 579 (824)
.-+++...++.||+..|..+. +.+..+|+.+++-..--+++..-.+.+++..+++||+.... .+.+++||+.
T Consensus 22 ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-----~~~v~v~D~~ 93 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-----NHEGFVYDLA 93 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETT
T ss_pred ccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-----CCEEEEEECC
Confidence 345777789999999996543 67999999999877666777666778888899999998653 4789999998
Q ss_pred CCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEE-cC--CCCCCCcc-eEEEEECCEEEEE
Q psy17309 580 ENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IE--PMRHRRSG-VSCIAYHECIYVI 655 (824)
Q Consensus 580 t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~p~~r~~-~~~~~~~~~iyv~ 655 (824)
+.+- +..++.+..+.+++.-+++||+.-| .+.+..+||++.+-.. +. .-+.+... -.+...+|+||+-
T Consensus 94 tl~~--~~ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 94 TLTP--RARFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp TTEE--EEEEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcE--EEEEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEE
Confidence 8763 3333334456777766788999755 3579999999876432 21 12222222 2344569999965
Q ss_pred ecCCCCCccceEEEEeCCCCC---EEECCCCCC-------CC--cceEEEEE--CCEEEEEcc
Q psy17309 656 GGFNGMSRMCNGEKYNPVTKT---WSQVPDMYN-------PR--SNFAIEVI--DDMIFAIGG 704 (824)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~-------~r--~~~~~~~~--~~~i~v~GG 704 (824)
--. .+.|.+.|+++.+ |-.++.+.. +. .--+++.. ++++||.|=
T Consensus 166 vw~-----s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 166 VWL-----TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp ETT-----TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred ECC-----CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 432 4789999999876 445443311 11 11233333 578888873
No 43
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.92 E-value=0.0025 Score=67.04 Aligned_cols=223 Identities=10% Similarity=-0.054 Sum_probs=130.1
Q ss_pred CceEEEEECCCCcEE-EcccCCCCCCCceeEEEE-ECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCC----cc
Q psy17309 474 TDFVETYDTRADRWV-KIDQVDPMGPRAYHGTAV-IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK----RC 547 (824)
Q Consensus 474 ~~~~~~yd~~~~~W~-~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----r~ 547 (824)
.+.+..+|+.+.+-. .++. ......+++ -++++|+.... .+.+.++|+.+.+-...-+.+.. ..
T Consensus 63 ~~~v~viD~~t~~~~~~i~~-----~~~p~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~ 132 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITG-----FTSPRYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGS 132 (328)
T ss_dssp GTEEEEEETTTCCEEEEEEC-----CSSEEEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCB
T ss_pred CCEEEEEECcccEEEEEcCC-----CCCCcEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCC
Confidence 357899999988763 3321 222344555 57899998742 36799999999875422121110 02
Q ss_pred eEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEE-ECCEEEEEcccCCCC-----cCCceE
Q psy17309 548 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT-LQGKIYITGGFNGHN-----CLNSCE 621 (824)
Q Consensus 548 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~-----~~~~v~ 621 (824)
-..++..++++|+..- ...+.+.++|+.+.+....-+.. ...+.++. -+|++|+....+... ..+.+.
T Consensus 133 p~~i~~~~~~lyv~~~----~~~~~v~viD~~t~~~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~ 206 (328)
T 3dsm_A 133 TEQMVQYGKYVYVNCW----SYQNRILKIDTETDKVVDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLY 206 (328)
T ss_dssp CCCEEEETTEEEEEEC----TTCCEEEEEETTTTEEEEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEE
T ss_pred cceEEEECCEEEEEcC----CCCCEEEEEECCCCeEEEEEEcC--CCccceEEcCCCCEEEEECCCccCCccccCCceEE
Confidence 2234447899999852 02368999999998764322211 11122333 368988875322111 136799
Q ss_pred EEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCC-CCcceEEEE--EC
Q psy17309 622 VYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN-PRSNFAIEV--ID 696 (824)
Q Consensus 622 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~--~~ 696 (824)
++|+.+.+....-.++.......++.. ++.+|+..+ .++++|+.+.+.....-.+. ...-.++++ -+
T Consensus 207 ~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 207 RIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp EEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--------SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTT
T ss_pred EEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--------EEEEEECCCCceeeeeeecCCCCceEEEEEcCCC
Confidence 999999886543334433333344444 567888643 78999998877532222222 223334444 26
Q ss_pred CEEEEEccCCCCceeeEEEEEECCC
Q psy17309 697 DMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 697 ~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
++||+....+- .....+.+||++.
T Consensus 279 g~lyva~~~~y-~~~~~V~v~d~~g 302 (328)
T 3dsm_A 279 GEVYVADAIDY-QQQGIVYRYSPQG 302 (328)
T ss_dssp CCEEEEECTTS-SSEEEEEEECTTC
T ss_pred CeEEEEccccc-ccCCEEEEECCCC
Confidence 88999862111 1235799999983
No 44
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.90 E-value=0.015 Score=62.25 Aligned_cols=249 Identities=14% Similarity=0.185 Sum_probs=140.9
Q ss_pred CCCCCCEEEEEccCCCCCCCceEEEEECCCC--cEEEcccCCCC-----CCCceeEEEEECCEEEEEeecCCCcccceEE
Q psy17309 455 PRVPHEILFAIGGWSGGSPTDFVETYDTRAD--RWVKIDQVDPM-----GPRAYHGTAVIGYNIYVIGGFDGNEYYNSCR 527 (824)
Q Consensus 455 ~r~~~~~l~~~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~-----~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 527 (824)
|-...+.+++... ...+.+||+.+. .|..-...... ......+.+..++.||+... ...++
T Consensus 49 p~v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l~ 116 (376)
T 3q7m_A 49 PALADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQVY 116 (376)
T ss_dssp CEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEEE
T ss_pred cEEECCEEEEEcC------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEEE
Confidence 3334566666542 247899998765 47652111100 12233445556888888643 25799
Q ss_pred EEECCCCc--eEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCc--EEeecCCCc--ccCceEEEEE
Q psy17309 528 CFNAVTKV--WKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNV--ERSDASATTL 601 (824)
Q Consensus 528 ~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~ 601 (824)
++|+.+++ |+.-..-. ...+.+..++.||+..+ ...++.+|+.+.+ |+.-...+. .+...+.+..
T Consensus 117 a~d~~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 187 (376)
T 3q7m_A 117 ALNTSDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA 187 (376)
T ss_dssp EEETTTCCEEEEEECSSC---CCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE
T ss_pred EEECCCCCEEEEEeCCCc---eEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE
Confidence 99998876 76532211 11223456888887543 2479999998775 876543221 1222344555
Q ss_pred CCEEEEEcccCCCCcCCceEEEeCCCCe--EEEcCCCCCCC--------cceEEEEECCEEEEEecCCCCCccceEEEEe
Q psy17309 602 QGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHRR--------SGVSCIAYHECIYVIGGFNGMSRMCNGEKYN 671 (824)
Q Consensus 602 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd 671 (824)
++.+|+ |..+ ..+..||+.+++ |+.-...|... .....+..++.+|+.+. ...+.++|
T Consensus 188 ~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~~~d 255 (376)
T 3q7m_A 188 FGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLTALD 255 (376)
T ss_dssp TTEEEE-CCTT-----TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCEEEEE
T ss_pred CCEEEE-EcCC-----CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEEEEEE
Confidence 888776 3222 468899988764 77654332211 11233456888888653 24688999
Q ss_pred CCCC--CEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCc--EEeccCCCCCccceeEEEEcCccc
Q psy17309 672 PVTK--TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE--WYEATDMNIYRSALSACVIMGLPN 747 (824)
Q Consensus 672 ~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~~~ 747 (824)
+.+. .|+.-.. ...+.+..++.||+.... ..+..+|+.+.+ |+.-. ++ .+...+.++.++.+|
T Consensus 256 ~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~~------g~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~~~~~l~ 322 (376)
T 3q7m_A 256 LRSGQIMWKRELG-----SVNDFIVDGNRIYLVDQN------DRVMALTIDGGVTLWTQSD-LL-HRLLTSPVLYNGNLV 322 (376)
T ss_dssp TTTCCEEEEECCC-----CEEEEEEETTEEEEEETT------CCEEEEETTTCCEEEEECT-TT-TSCCCCCEEETTEEE
T ss_pred CCCCcEEeeccCC-----CCCCceEECCEEEEEcCC------CeEEEEECCCCcEEEeecc-cC-CCcccCCEEECCEEE
Confidence 9776 4775421 123455668899987532 258899998765 76531 11 122233445566666
Q ss_pred ee
Q psy17309 748 VY 749 (824)
Q Consensus 748 ~~ 749 (824)
+.
T Consensus 323 v~ 324 (376)
T 3q7m_A 323 VG 324 (376)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 45
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.82 E-value=0.0034 Score=62.45 Aligned_cols=182 Identities=12% Similarity=0.007 Sum_probs=117.4
Q ss_pred eEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCC
Q psy17309 502 HGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTEN 581 (824)
Q Consensus 502 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 581 (824)
.++...++.||+..|..+ .+.+..+|+.+++-..--+++..-.+.+++..+++||+.... .+.+++||+.+.
T Consensus 46 qGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-----~~~v~v~D~~t~ 117 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-----NGLGFVWNIRNL 117 (262)
T ss_dssp EEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETTTC
T ss_pred ceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-----CCEEEEEECccC
Confidence 456666899999999654 267899999999876555565555666788899999999653 378999999887
Q ss_pred cEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEE-cCC--CCCCCcce-EEEEECCEEEEEec
Q psy17309 582 QWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IEP--MRHRRSGV-SCIAYHECIYVIGG 657 (824)
Q Consensus 582 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~--~p~~r~~~-~~~~~~~~iyv~GG 657 (824)
+-. ..++.+-.+.+++.-+++||+.-| .+.+..+||++.+-.. +.. -+.+.... .+...+|+||+---
T Consensus 118 ~~~--~ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w 189 (262)
T 3nol_A 118 RQV--RSFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVW 189 (262)
T ss_dssp CEE--EEEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEET
T ss_pred cEE--EEEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEc
Confidence 643 333333355666666778888654 3679999999876332 221 11121111 24455899996542
Q ss_pred CCCCCccceEEEEeCCCCC---EEECCCCCC------C--CcceEEEEE--CCEEEEEcc
Q psy17309 658 FNGMSRMCNGEKYNPVTKT---WSQVPDMYN------P--RSNFAIEVI--DDMIFAIGG 704 (824)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~---W~~~~~~p~------~--r~~~~~~~~--~~~i~v~GG 704 (824)
. .+.|.+.|+++.+ |-.++.+.. + -.-.+++.- ++++||.|-
T Consensus 190 ~-----~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 190 Q-----TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp T-----SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred c-----CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 2 4789999999876 444443311 1 111233333 567888874
No 46
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.78 E-value=0.012 Score=62.78 Aligned_cols=231 Identities=12% Similarity=0.068 Sum_probs=133.0
Q ss_pred ceEEEEECCCCc--EEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCc--eEEeccCCC--Ccce
Q psy17309 475 DFVETYDTRADR--WVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNF--KRCY 548 (824)
Q Consensus 475 ~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~--~r~~ 548 (824)
..+.++|+.+.+ |..- .... ...+.++.++.+|+..+ ...++.+|+.+++ |+.-...+. .+..
T Consensus 113 g~l~a~d~~tG~~~W~~~--~~~~---~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTK--VAGE---ALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp SEEEEEETTTCCEEEEEE--CSSC---CCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred CEEEEEECCCCCEEEEEe--CCCc---eEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 468899988664 6552 1111 11223445788887543 2469999998876 875443221 1122
Q ss_pred EEEEEECCEEEEEecccCCCCCCeEEEEeCCCCc--EEeecCCCccc--------CceEEEEECCEEEEEcccCCCCcCC
Q psy17309 549 VSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVER--------SDASATTLQGKIYITGGFNGHNCLN 618 (824)
Q Consensus 549 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r--------~~~~~~~~~~~lyv~GG~~~~~~~~ 618 (824)
.+.+..++.||+. .. ...+..+|+.+.+ |+.-...|... .....+..++.+|+.+. ..
T Consensus 182 ~~~~~~~~~v~~g-~~-----~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g 249 (376)
T 3q7m_A 182 SAPTTAFGAAVVG-GD-----NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NG 249 (376)
T ss_dssp CCCEEETTEEEEC-CT-----TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TS
T ss_pred CCcEEECCEEEEE-cC-----CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------Cc
Confidence 3345557887773 21 2468999998764 77543333211 22333456888888642 24
Q ss_pred ceEEEeCCCCe--EEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC--EEECCCCCCCCcceEEEE
Q psy17309 619 SCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEV 694 (824)
Q Consensus 619 ~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~ 694 (824)
.+.++|+.+++ |+.-. + ...+.+..++.||+.... ..+.++|+.+.+ |+.-. ++ .+...+.+.
T Consensus 250 ~l~~~d~~tG~~~w~~~~--~---~~~~~~~~~~~l~~~~~~------g~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~ 316 (376)
T 3q7m_A 250 NLTALDLRSGQIMWKREL--G---SVNDFIVDGNRIYLVDQN------DRVMALTIDGGVTLWTQSD-LL-HRLLTSPVL 316 (376)
T ss_dssp CEEEEETTTCCEEEEECC--C---CEEEEEEETTEEEEEETT------CCEEEEETTTCCEEEEECT-TT-TSCCCCCEE
T ss_pred EEEEEECCCCcEEeeccC--C---CCCCceEECCEEEEEcCC------CeEEEEECCCCcEEEeecc-cC-CCcccCCEE
Confidence 68999998764 76532 1 123455668999987642 468999998765 76632 11 222334455
Q ss_pred ECCEEEEEccCCCCceeeEEEEEECCCCc--EEeccCCCCCccceeEEEEcCcccee
Q psy17309 695 IDDMIFAIGGFNGVTTIYHVECYDEKTDE--WYEATDMNIYRSALSACVIMGLPNVY 749 (824)
Q Consensus 695 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~~~~~ 749 (824)
.++.||+... + ..++++|+++.+ |+.- ++........+..++.+|+.
T Consensus 317 ~~~~l~v~~~-~-----g~l~~~d~~tG~~~~~~~--~~~~~~~~~~~~~~~~l~v~ 365 (376)
T 3q7m_A 317 YNGNLVVGDS-E-----GYLHWINVEDGRFVAQQK--VDSSGFQTEPVAADGKLLIQ 365 (376)
T ss_dssp ETTEEEEECT-T-----SEEEEEETTTCCEEEEEE--CCTTCBCSCCEEETTEEEEE
T ss_pred ECCEEEEEeC-C-----CeEEEEECCCCcEEEEEe--cCCCcceeCCEEECCEEEEE
Confidence 6888887642 1 268999998875 5432 22222223344557776664
No 47
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.72 E-value=0.0024 Score=62.98 Aligned_cols=157 Identities=15% Similarity=0.063 Sum_probs=110.5
Q ss_pred ceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCC
Q psy17309 547 CYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPE 626 (824)
Q Consensus 547 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~ 626 (824)
.-.++...++.+|+-.|..+. +.+.++|+.+.+=..--+++..-.+.+++..+++||+.... .+.+.+||++
T Consensus 22 ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-----~~~v~v~D~~ 93 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-----NHEGFVYDLA 93 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETT
T ss_pred ccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-----CCEEEEEECC
Confidence 345778889999999886543 67999999999877666777777778888899999998643 3689999998
Q ss_pred CCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEE-C--CCCCCCCcc-eEEEEECCEEEEE
Q psy17309 627 CNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-V--PDMYNPRSN-FAIEVIDDMIFAI 702 (824)
Q Consensus 627 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~p~~r~~-~~~~~~~~~i~v~ 702 (824)
+.+- +..++.+..+.+.+.-+++||+.-| .+.+..+|+++.+-.. + ..-+.+... -.+...+++||+-
T Consensus 94 tl~~--~~ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 94 TLTP--RARFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp TTEE--EEEEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcE--EEEEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEE
Confidence 8653 3333444466777777888999876 3689999999865322 2 112222111 2344558999865
Q ss_pred ccCCCCceeeEEEEEECCCCcE
Q psy17309 703 GGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~W 724 (824)
-- ..++|.+.||++.+=
T Consensus 166 vw-----~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 166 VW-----LTSRIARIDPASGKV 182 (243)
T ss_dssp ET-----TTTEEEEECTTTCBE
T ss_pred EC-----CCCeEEEEECCCCCE
Confidence 32 234899999999753
No 48
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=97.64 E-value=2.3e-05 Score=70.87 Aligned_cols=83 Identities=18% Similarity=0.163 Sum_probs=67.2
Q ss_pred eeecceEEEEcccccccccceeEEeeecccchhhhheeecccc--------------------------eecCHhhHHHH
Q psy17309 227 AVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERK--------------------------LHITEDNVASL 280 (824)
Q Consensus 227 ~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~--------------------------l~l~~~~v~~l 280 (824)
+..+.++..|-...+ .+.|.++++++.+++.+++|+|... +.++.+++.+|
T Consensus 21 A~~S~~ik~ml~~~~---~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~eL 97 (141)
T 1fs1_B 21 AKQSVTIKTMLEDLG---MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFEL 97 (141)
T ss_dssp GGTCHHHHHHHHHTC---CSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHHHH
T ss_pred HHHhHHHHHHHHhcC---CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHHHH
Confidence 444555555511111 4579999999999999999998866 77889999999
Q ss_pred HHHHhhcChHhHHHHHHHHHhhcCCcchHHHH
Q psy17309 281 LLATDFFCMSKAQDLCCDFIKRLTTPRNCFGI 312 (824)
Q Consensus 281 l~~a~~~~i~~l~~~c~~~l~~~l~~~N~~~i 312 (824)
+.||++|+|..|.+.|++++...+...+.-+|
T Consensus 98 i~AAnyL~I~~Lldl~c~~vA~~ikgkt~eei 129 (141)
T 1fs1_B 98 ILAANYLDIKGLLDVTCKTVANMIKGKTPEEI 129 (141)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 99999999999999999999998887776554
No 49
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=97.57 E-value=1.6e-05 Score=73.58 Aligned_cols=88 Identities=18% Similarity=0.196 Sum_probs=50.9
Q ss_pred eeecceEEEEcccccccccceeEEeeecccchhhhheeecccc---------------------------eecCHhhHHH
Q psy17309 227 AVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERK---------------------------LHITEDNVAS 279 (824)
Q Consensus 227 ~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~---------------------------l~l~~~~v~~ 279 (824)
+..+.+|..|-...+ ..+.|.++++++.+++.+++|+|... +.++.+++.+
T Consensus 23 A~~S~~ik~ml~~~~--~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l~e 100 (160)
T 2p1m_A 23 ALESQTIAHMVEDDC--VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFE 100 (160)
T ss_dssp HHTCTTTC--------------CCTTSCHHHHHHHHHC------------------------------------------
T ss_pred HHHhHHHHHHHHccC--CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHHHH
Confidence 456666666621111 24579999999999999999999876 4688899999
Q ss_pred HHHHHhhcChHhHHHHHHHHHhhcC---CcchHHHHHHHH
Q psy17309 280 LLLATDFFCMSKAQDLCCDFIKRLT---TPRNCFGILLFS 316 (824)
Q Consensus 280 ll~~a~~~~i~~l~~~c~~~l~~~l---~~~N~~~i~~~a 316 (824)
|+.||++|+|..|++.|++++...+ +++.+..+|.++
T Consensus 101 Li~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~ 140 (160)
T 2p1m_A 101 LILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIK 140 (160)
T ss_dssp CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 9999999999999999999999999 455554444443
No 50
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.40 E-value=0.011 Score=58.89 Aligned_cols=151 Identities=11% Similarity=-0.007 Sum_probs=102.5
Q ss_pred eEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCC
Q psy17309 502 HGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTEN 581 (824)
Q Consensus 502 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 581 (824)
.++...++.||+..|..+ .+..+|+.+++-..-- ++..-.+.+++..+++||+.... .+.+++||+.+.
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~D~~Tl 126 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-----EGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-----SCEEEEEETTTT
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-----CCEEEEEECCcC
Confidence 566777999999998653 3899999998754333 55444556688889999998653 378999999887
Q ss_pred cEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEE-cC--CCCCCCcc-eEEEEECCEEEEEec
Q psy17309 582 QWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IE--PMRHRRSG-VSCIAYHECIYVIGG 657 (824)
Q Consensus 582 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~p~~r~~-~~~~~~~~~iyv~GG 657 (824)
+-. ..++.+-.+.+++.-+++||+.-| .+.+..+||++.+-.. +. .-+.+... -.....+|+||+---
T Consensus 127 ~~~--~ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw 198 (268)
T 3nok_A 127 QRE--RTTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIW 198 (268)
T ss_dssp EEE--EEEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET
T ss_pred cEE--EEEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEEC
Confidence 643 223333445677777889999865 3679999999876432 21 11222111 123455899996432
Q ss_pred CCCCCccceEEEEeCCCCC
Q psy17309 658 FNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~ 676 (824)
. .+.|.+.|+++.+
T Consensus 199 ~-----s~~I~vIDp~TG~ 212 (268)
T 3nok_A 199 H-----SSDVLEIDPATGT 212 (268)
T ss_dssp T-----CSEEEEECTTTCB
T ss_pred C-----CCeEEEEeCCCCc
Confidence 2 4689999999875
No 51
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.40 E-value=0.035 Score=55.76 Aligned_cols=193 Identities=13% Similarity=0.029 Sum_probs=118.4
Q ss_pred eEEEEEC-CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCC
Q psy17309 502 HGTAVIG-YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTE 580 (824)
Q Consensus 502 ~~~~~~~-~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 580 (824)
+++++.+ +.||+..|..+ .+.+..+|+.+++-...-+++......+++..+++||+..- ..+.+++||+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~-----~~~~v~viD~~t 95 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW-----LKNIGFIYDRRT 95 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET-----TCSEEEEEETTT
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe-----cCCEEEEEECCC
Confidence 5676665 89999887432 36799999999986654445444455677888999999864 246799999987
Q ss_pred CcEEeecCCCcc-cCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEE-cC--CCCCCC-cceEEEEECCEEEEE
Q psy17309 581 NQWSLIAPMNVE-RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IE--PMRHRR-SGVSCIAYHECIYVI 655 (824)
Q Consensus 581 ~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~p~~r-~~~~~~~~~~~iyv~ 655 (824)
.+= +..+|.+ -.+.+++.-++++|+.-| .+.+..+|+++.+-.. +. ..+.+. .-..+...+++||+-
T Consensus 96 ~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn 167 (266)
T 2iwa_A 96 LSN--IKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWAN 167 (266)
T ss_dssp TEE--EEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred CcE--EEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEe
Confidence 653 2223222 234445544678998754 3689999999865322 22 111121 112334448899976
Q ss_pred ecCCCCCccceEEEEeCCCCC---EEECCCC---------CCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECC
Q psy17309 656 GGFNGMSRMCNGEKYNPVTKT---WSQVPDM---------YNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 720 (824)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~~~---W~~~~~~---------p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 720 (824)
-.. .+.|.+.|+.+.+ |-.++.+ +..-.-.+++.- ++++||.|+... .+++.+..
T Consensus 168 ~~~-----~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~-----~v~~i~l~ 236 (266)
T 2iwa_A 168 IWQ-----TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP-----KLFEIKLH 236 (266)
T ss_dssp ETT-----SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS-----EEEEEEEE
T ss_pred cCC-----CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC-----eEEEEEEe
Confidence 542 4689999998875 3333211 000112344443 468999987543 45555543
No 52
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.37 E-value=0.0056 Score=60.87 Aligned_cols=156 Identities=13% Similarity=0.056 Sum_probs=104.7
Q ss_pred EEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCC
Q psy17309 549 VSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECN 628 (824)
Q Consensus 549 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~ 628 (824)
.++...++.||+..|..+. +.+.++|+.+.+=..--+++..-.+.+++..+++||+.... .+.+.+||+++.
T Consensus 46 qGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-----~~~v~v~D~~t~ 117 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-----NGLGFVWNIRNL 117 (262)
T ss_dssp EEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETTTC
T ss_pred ceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-----CCEEEEEECccC
Confidence 4566668999999986542 57899999999866555666555667788889999998653 368999999887
Q ss_pred eEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEE-CC--CCCCCCcce-EEEEECCEEEEEcc
Q psy17309 629 QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-VP--DMYNPRSNF-AIEVIDDMIFAIGG 704 (824)
Q Consensus 629 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~p~~r~~~-~~~~~~~~i~v~GG 704 (824)
+-. ..++.+..+.+.+.-+++||+.-| .+.++.+|+++.+-.. +. .-+.+.... .+...+++||+--
T Consensus 118 ~~~--~ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~- 188 (262)
T 3nol_A 118 RQV--RSFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV- 188 (262)
T ss_dssp CEE--EEEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred cEE--EEEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE-
Confidence 643 233333455666766788888766 3679999999865322 21 111111111 2444589999643
Q ss_pred CCCCceeeEEEEEECCCCcEE
Q psy17309 705 FNGVTTIYHVECYDEKTDEWY 725 (824)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~W~ 725 (824)
+ ..+.|.+.||++.+=.
T Consensus 189 w----~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 189 W----QTNKIVRIDPETGKVT 205 (262)
T ss_dssp T----TSSEEEEECTTTCBEE
T ss_pred c----cCCeEEEEECCCCcEE
Confidence 1 2348999999997643
No 53
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.34 E-value=0.0044 Score=66.53 Aligned_cols=225 Identities=14% Similarity=0.109 Sum_probs=120.1
Q ss_pred EEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
.+++.|+. ...+..+|..+++-...-.. ...-.+++.. +..+|+.|+.+ ..+..||+.+++...
T Consensus 3 ~l~vs~~~-----d~~v~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 3 FAYIANSE-----SDNISVIDVTSNKVTATIPV----GSNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIA 68 (391)
T ss_dssp EEEEEETT-----TTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEE
T ss_pred EEEEEcCC-----CCEEEEEECCCCeEEEEeec----CCCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEE
Confidence 45666543 35688999988765442111 1112334443 44677777543 578999998887544
Q ss_pred eccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-C-CEEEEEcccCCC
Q psy17309 539 IAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-Q-GKIYITGGFNGH 614 (824)
Q Consensus 539 ~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~ 614 (824)
.-..+. .-.+++.. +..||+.|.. ...+.+||+.+++....-.. .....+++.. + ..+|+.++.+
T Consensus 69 ~~~~~~--~v~~~~~spdg~~l~~~~~~-----~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~-- 137 (391)
T 1l0q_A 69 TVPAGS--SPQGVAVSPDGKQVYVTNMA-----SSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD-- 137 (391)
T ss_dssp EEECSS--SEEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT--
T ss_pred EEECCC--CccceEECCCCCEEEEEECC-----CCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCC--
Confidence 333222 22333333 3456666542 25799999998875433222 2222333333 3 4677776543
Q ss_pred CcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-C-CEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEE
Q psy17309 615 NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-H-ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 692 (824)
Q Consensus 615 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 692 (824)
..+..||+.+.+....-.. ......++.. + ..||+.++.+ ..+.+||+.+.+-...-.. .....++
T Consensus 138 ---~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~--~~~~~~~ 205 (391)
T 1l0q_A 138 ---KTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKV--EAAPSGI 205 (391)
T ss_dssp ---TEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSEEEEE
T ss_pred ---CEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEec--CCCccce
Confidence 4789999988876543222 1222223333 3 4577776543 5689999987754433211 1111222
Q ss_pred EEE-CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 693 EVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 693 ~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
+.. +++.+++++.+. ....+.+||+.+.+-
T Consensus 206 ~~~~~g~~l~~~~~~~--~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDK--YFNTVSMIDTGTNKI 236 (391)
T ss_dssp EECTTSSEEEEEEECS--SCCEEEEEETTTTEE
T ss_pred EECCCCCEEEEEecCc--CCCcEEEEECCCCeE
Confidence 222 444444443211 123688999887653
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.24 E-value=0.029 Score=59.27 Aligned_cols=242 Identities=10% Similarity=0.096 Sum_probs=123.9
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
+.++++|+. ...+..||..+.++..+..... ....-.+++.. ++..++.|+.+ ..+..||..++++..
T Consensus 20 ~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 20 RTQIAICPN-----NHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp SSEEEEECS-----SSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCEEEEEeC-----CCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 445666653 3568889988887544321111 12222334444 56677777754 358889998888765
Q ss_pred eccCCCCcce-EEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCc-EEeecCCCcc--cCceEEEEE-CCEEEEEcccC
Q psy17309 539 IAPMNFKRCY-VSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIAPMNVE--RSDASATTL-QGKIYITGGFN 612 (824)
Q Consensus 539 ~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~~~~~~p~~--r~~~~~~~~-~~~lyv~GG~~ 612 (824)
...+...... .+++.. ++..++.|+.+ ..+..||..+.. |........+ ..-.+++.. ++..++.|+.+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 5433222222 223332 56677777743 346666666543 4333222111 112222222 56677777755
Q ss_pred CCCcCCceEEEeCCCC----------------eEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCC
Q psy17309 613 GHNCLNSCEVYDPECN----------------QWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVT 674 (824)
Q Consensus 613 ~~~~~~~v~~yd~~~~----------------~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 674 (824)
..+..||.... .-..+..+.........+.+ ++..++.|+.+ ..+.+||..+
T Consensus 164 -----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~ 233 (372)
T 1k8k_C 164 -----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----STVCLADADK 233 (372)
T ss_dssp -----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----TEEEEEEGGG
T ss_pred -----CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----CEEEEEECCC
Confidence 36778885311 11111122222222233333 56677777653 4688899876
Q ss_pred CCEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCC--CcEEeccCCCCC
Q psy17309 675 KTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT--DEWYEATDMNIY 733 (824)
Q Consensus 675 ~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~ 733 (824)
.+-...-..........+..-++++++.| .++ .+.+||..+ ++|..+..+..+
T Consensus 234 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~-----~i~i~~~~~~~~~~~~~~~~~~~ 288 (372)
T 1k8k_C 234 KMAVATLASETLPLLAVTFITESSLVAAG-HDC-----FPVLFTYDSAAGKLSFGGRLDVP 288 (372)
T ss_dssp TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTS-----SCEEEEEETTTTEEEECCCCCCC
T ss_pred CceeEEEccCCCCeEEEEEecCCCEEEEE-eCC-----eEEEEEccCcCceEEEeeccCcc
Confidence 65322211111111111222377777666 433 456777777 999988666543
No 55
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.023 Score=60.09 Aligned_cols=241 Identities=11% Similarity=0.148 Sum_probs=126.4
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-C--CEEEEEeecCCCcccceEEEEECCCCce
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-G--YNIYVIGGFDGNEYYNSCRCFNAVTKVW 536 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~yd~~~~~W 536 (824)
+..++.|+.+ ..+..||.....+..+..... ....-.+++.. + +.+++.|+.+ ..+..||..+++|
T Consensus 23 ~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 23 GKRLATCSSD-----KTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 91 (379)
T ss_dssp SSEEEEEETT-----SCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCEEEEEECC-----CcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCce
Confidence 3455666532 347778877655554321111 11222333332 2 5677777754 3588899999988
Q ss_pred EEeccCCCCcceEEEEEE--C--CEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccC-ceEEEEE----------
Q psy17309 537 KEIAPMNFKRCYVSTAVH--Q--DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERS-DASATTL---------- 601 (824)
Q Consensus 537 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~-~~~~~~~---------- 601 (824)
..+..+.........+.+ + +.+++.|+.+ ..+.+||..+..-.....+..... -.+++..
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 766655433222333333 3 5677777743 468888887763211111111111 1122222
Q ss_pred ----CCEEEEEcccCCCCcCCceEEEeCCCC--eEEEcCCCCCCCcceEEEEE--C---CEEEEEecCCCCCccceEEEE
Q psy17309 602 ----QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCIAY--H---ECIYVIGGFNGMSRMCNGEKY 670 (824)
Q Consensus 602 ----~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~iyv~GG~~~~~~~~~v~~y 670 (824)
++.+++.|+.++ .+..||..+. .|.....+........++.+ + +.+++.|+.+ ..+.+|
T Consensus 167 ~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----g~i~iw 236 (379)
T 3jrp_A 167 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-----RTCIIW 236 (379)
T ss_dssp ---CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-----SCEEEE
T ss_pred cCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC-----CEEEEE
Confidence 367778887653 5778887544 35555444333333333333 3 6788888764 357788
Q ss_pred eCCCCC----EEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECC-CCcEEeccCCCC
Q psy17309 671 NPVTKT----WSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK-TDEWYEATDMNI 732 (824)
Q Consensus 671 d~~~~~----W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~ 732 (824)
|..+.. ........... ....+.+ +++.+++|+.++ .+.+||.. ...|..+..+..
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 237 TQDNEQGPWKKTLLKEEKFPD-VLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp EESSTTSCCEEEESSSSCCSS-CEEEEEECSSSCCEEEEESSS-----SEEEEEEEETTEEEEEEEEC-
T ss_pred eCCCCCccceeeeeccccCCC-cEEEEEEcCCCCEEEEecCCC-----cEEEEeCCCCCccccccceec
Confidence 877653 12222211111 1222222 677778877654 46667765 467887755433
No 56
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.17 E-value=0.26 Score=49.89 Aligned_cols=218 Identities=7% Similarity=-0.037 Sum_probs=118.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..+..||+. .++..+.... ....-++++.. ++.+|+.... ...+++||+. ++...+........-++++.
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~ 106 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPT--PDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK-GIIKEYTLPNPDSAPYGITE 106 (299)
T ss_dssp TEEEEECTT-CCEEEEECSS--TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CcEEEEcCC-CCeEEecCCc--ccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-CcEEEEeCCCcCCCceeeEE
Confidence 468889988 7766543221 11223344443 6678877532 2458899986 55554432112223334444
Q ss_pred E-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEE
Q psy17309 554 H-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWT 631 (824)
Q Consensus 554 ~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 631 (824)
. ++.+|+.... ...+.++|+ +.+..............+++.- ++++|+.... ...+.+||+ +++..
T Consensus 107 ~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 107 GPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDIT 174 (299)
T ss_dssp CTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEE
T ss_pred CCCCCEEEEecC-----CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEE
Confidence 4 5788887532 257899999 6665544221112222333333 5788886421 246889999 77766
Q ss_pred EcCCCCCCCcce-EEEEE-CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCC
Q psy17309 632 LIEPMRHRRSGV-SCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 707 (824)
Q Consensus 632 ~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 707 (824)
... .+...... +.+.. ++.||+.... ...+.+||+ +.+..... ++..........+ +++||+....+
T Consensus 175 ~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~- 245 (299)
T 2z2n_A 175 EFK-IPTPASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTEWGA- 245 (299)
T ss_dssp EEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT-
T ss_pred Eee-CCCCCCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEeccCC-
Confidence 542 12112222 33333 5789887642 257899999 77766542 2212222223333 57888875222
Q ss_pred CceeeEEEEEECCCCcEEec
Q psy17309 708 VTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 708 ~~~~~~v~~yd~~~~~W~~~ 727 (824)
+.+.+||+ +.+...+
T Consensus 246 ----~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 246 ----NKIGRLTS-NNIIEEY 260 (299)
T ss_dssp ----TEEEEEET-TTEEEEE
T ss_pred ----ceEEEECC-CCceEEE
Confidence 26889998 4454443
No 57
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.11 E-value=0.042 Score=55.17 Aligned_cols=154 Identities=16% Similarity=0.104 Sum_probs=99.4
Q ss_pred EEEEEEC-CEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCC
Q psy17309 549 VSTAVHQ-DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPEC 627 (824)
Q Consensus 549 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~ 627 (824)
++++..+ +.+|+..|..+ .+.+.++|+.+++=..--+++....+.+++..+++||+..-. .+.+.+||+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~viD~~t 95 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIYDRRT 95 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEEETTT
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEEECCC
Confidence 5666665 89999877422 368999999999865544455544556777789999998543 36799999987
Q ss_pred CeEEEcCCCCCC-CcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEE-ECC--CCCCCC-cceEEEEECCEEEEE
Q psy17309 628 NQWTLIEPMRHR-RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS-QVP--DMYNPR-SNFAIEVIDDMIFAI 702 (824)
Q Consensus 628 ~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~--~~p~~r-~~~~~~~~~~~i~v~ 702 (824)
.+= +..+|.+ ..+.+.+.-++++|+.-| .+.+..+|+++.+=. .++ ..+.+. .-..+...+++||+-
T Consensus 96 ~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn 167 (266)
T 2iwa_A 96 LSN--IKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWAN 167 (266)
T ss_dssp TEE--EEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred CcE--EEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEe
Confidence 653 2222222 334455555678998765 368999999886532 221 111121 112333448899876
Q ss_pred ccCCCCceeeEEEEEECCCCc
Q psy17309 703 GGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~ 723 (824)
-.. .++|.+.|+++.+
T Consensus 168 ~~~-----~~~V~vID~~tg~ 183 (266)
T 2iwa_A 168 IWQ-----TDCIARISAKDGT 183 (266)
T ss_dssp ETT-----SSEEEEEETTTCC
T ss_pred cCC-----CCeEEEEECCCCc
Confidence 432 3489999999874
No 58
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.06 E-value=0.0086 Score=64.20 Aligned_cols=184 Identities=14% Similarity=0.123 Sum_probs=102.7
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CC-EEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
+.+|+.|+.+ ..+..||..+++-...-... ..-.+++.. ++ .||+.|+.+ ..+.++|+.+.+....
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~ 69 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIAT 69 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEE
Confidence 3567777643 56899999887654322222 122333333 34 577777643 5789999988875443
Q ss_pred cCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEecCCCCC
Q psy17309 587 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMS 662 (824)
Q Consensus 587 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~ 662 (824)
-..+. .-.+++.. +..||+.|..+ ..+.+||+.+++....-.. .....+++.. ++ .+|+.++.+
T Consensus 70 ~~~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~--- 137 (391)
T 1l0q_A 70 VPAGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD--- 137 (391)
T ss_dssp EECSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT---
T ss_pred EECCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCC---
Confidence 22222 22233333 34566665432 5689999998875443222 2222233333 34 577777643
Q ss_pred ccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEE
Q psy17309 663 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 725 (824)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (824)
..+.+||+.+.+....-.. ......++.. +..||+.++.++ .+.+||+.+.+-.
T Consensus 138 --~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~-----~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 138 --KTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSM-----SISVIDTVTNSVI 193 (391)
T ss_dssp --TEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTT-----EEEEEETTTTEEE
T ss_pred --CEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCCC-----EEEEEECCCCeEE
Confidence 5789999988765443221 1111222222 346777765543 5888898877544
No 59
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.04 E-value=0.12 Score=53.91 Aligned_cols=219 Identities=8% Similarity=-0.020 Sum_probs=118.5
Q ss_pred CceEEEEECCCCcEEEc-ccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCC-----
Q psy17309 474 TDFVETYDTRADRWVKI-DQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK----- 545 (824)
Q Consensus 474 ~~~~~~yd~~~~~W~~~-~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----- 545 (824)
...+..+|+.+.+.... +... ..++++.. ++.+|+.++.+ ..++.+|+.+++-...-+.+..
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~ 137 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL-----KPFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRKRTEE 137 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-----CCCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCCCCSS
T ss_pred CccEEEEcCCCCeEEEEEecCC-----CcceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCccccc
Confidence 45799999988765432 1111 12233444 45688776532 4799999998875332222111
Q ss_pred ---cceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCC
Q psy17309 546 ---RCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLN 618 (824)
Q Consensus 546 ---r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~ 618 (824)
..-..++.. ++.+|+.+... ...++++|+.+.+-...-+. .......++.. ++.+|+... ..
T Consensus 138 ~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~------~~ 206 (353)
T 3vgz_A 138 VRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNA------DG 206 (353)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECT------TS
T ss_pred cCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcC------CC
Confidence 112334443 45677776321 25699999988764332221 11112233333 456777643 24
Q ss_pred ceEEEeCCCCeEEEcCCCCC--CCcce-EEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEE
Q psy17309 619 SCEVYDPECNQWTLIEPMRH--RRSGV-SCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIE 693 (824)
Q Consensus 619 ~v~~yd~~~~~W~~~~~~p~--~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 693 (824)
.+..||+.+.+-...-+.+. +.... +++.. ++.+|+.... .+.+.+||+.+.+....-..+.+ .+++
T Consensus 207 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~---~~~~ 278 (353)
T 3vgz_A 207 ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVAAPES---LAVL 278 (353)
T ss_dssp EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEECSSC---CCEE
T ss_pred eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCC---ceEE
Confidence 68899998876433222211 12222 23333 4557776542 36799999988775443333333 1222
Q ss_pred EE--CCEEEEEccCCCCceeeEEEEEECCCCcEEe
Q psy17309 694 VI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 694 ~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
.. ++.+|+.+..++ .+.+||+.+.+...
T Consensus 279 ~s~dg~~l~v~~~~~~-----~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 279 FNPARNEAYVTHRQAG-----KVSVIDAKSYKVVK 308 (353)
T ss_dssp EETTTTEEEEEETTTT-----EEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEECCCC-----eEEEEECCCCeEEE
Confidence 22 445777764432 68999998876544
No 60
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.03 E-value=0.14 Score=52.58 Aligned_cols=227 Identities=11% Similarity=0.135 Sum_probs=118.1
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
+..++.|+.+ ..+..||..+.+....-.. ....-.+++.. ++.+++.|+.+ ..+..||..+++-..
T Consensus 35 ~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 35 GEWLASSSAD-----KLIKIWGAYDGKFEKTISG---HKLGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLK 101 (312)
T ss_dssp SSEEEEEETT-----SCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCEEEEeeCC-----CeEEEEeCCCcccchhhcc---CCCceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEE
Confidence 3445555532 3577888877766542111 11112233333 56677777754 468889988775332
Q ss_pred eccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCC
Q psy17309 539 IAPMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHN 615 (824)
Q Consensus 539 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~ 615 (824)
.-...... -.+++. -++.+++.|+.+ ..+..||+.+.+-.. .++..........+ ++.+++.|+.+
T Consensus 102 ~~~~~~~~-v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d--- 170 (312)
T 4ery_A 102 TLKGHSNY-VFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLK--TLPAHSDPVSAVHFNRDGSLIVSSSYD--- 170 (312)
T ss_dssp EEECCSSC-EEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETT---
T ss_pred EEcCCCCC-EEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEE--EecCCCCcEEEEEEcCCCCEEEEEeCC---
Confidence 11111111 112222 256677777754 458889988765322 12221222222223 56777777765
Q ss_pred cCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEEC-CCCCCCCcc-eE
Q psy17309 616 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSN-FA 691 (824)
Q Consensus 616 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~-~~ 691 (824)
..+..||..+.+-...-.... ......+.+ +++.++.|+.+ ..+..||..+.+-... ......... ..
T Consensus 171 --~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
T 4ery_A 171 --GLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCLKTYTGHKNEKYCIFA 242 (312)
T ss_dssp --SCEEEEETTTCCEEEEECCSS-CCCEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEEEEECSSCCSSSCCCE
T ss_pred --CcEEEEECCCCceeeEEeccC-CCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEEEecCCceEEEEE
Confidence 368889988765432211111 111222223 56777777654 4688899877653222 111111111 11
Q ss_pred E-EEECCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 692 I-EVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 692 ~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
. ..-++.+++.|+.++ .+.+||..+.+
T Consensus 243 ~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~ 270 (312)
T 4ery_A 243 NFSVTGGKWIVSGSEDN-----LVYIWNLQTKE 270 (312)
T ss_dssp EEECSSSCEEEECCTTS-----CEEEEETTTCC
T ss_pred EEEeCCCcEEEEECCCC-----EEEEEECCCch
Confidence 2 223677888888765 58889988764
No 61
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.03 E-value=0.14 Score=55.86 Aligned_cols=215 Identities=13% Similarity=0.133 Sum_probs=116.7
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEEC
Q psy17309 476 FVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQ 555 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 555 (824)
.+..||..+.+-... ... ....-.++.. ++..++.|+.+ ..+..||..+++-...-. ........+..+
T Consensus 180 ~i~vwd~~~~~~~~~--~~~-h~~~v~~~~~-~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~--~~~~~v~~~~~~ 248 (445)
T 2ovr_B 180 TLKVWNAETGECIHT--LYG-HTSTVRCMHL-HEKRVVSGSRD-----ATLRVWDIETGQCLHVLM--GHVAAVRCVQYD 248 (445)
T ss_dssp CEEEEETTTTEEEEE--ECC-CSSCEEEEEE-ETTEEEEEETT-----SEEEEEESSSCCEEEEEE--CCSSCEEEEEEC
T ss_pred eEEEEECCcCcEEEE--ECC-CCCcEEEEEe-cCCEEEEEeCC-----CEEEEEECCCCcEEEEEc--CCcccEEEEEEC
Confidence 466777766654321 110 1111122222 34445566543 468888888765322111 111222233347
Q ss_pred CEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCC
Q psy17309 556 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP 635 (824)
Q Consensus 556 ~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 635 (824)
+..++.|+.+ ..+..||+.+.+-. ..+............++..++.|+.+ ..+..||..+.+-...
T Consensus 249 ~~~l~~~~~d-----g~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~-- 314 (445)
T 2ovr_B 249 GRRVVSGAYD-----FMVKVWDPETETCL--HTLQGHTNRVYSLQFDGIHVVSGSLD-----TSIRVWDVETGNCIHT-- 314 (445)
T ss_dssp SSCEEEEETT-----SCEEEEEGGGTEEE--EEECCCSSCEEEEEECSSEEEEEETT-----SCEEEEETTTCCEEEE--
T ss_pred CCEEEEEcCC-----CEEEEEECCCCcEe--EEecCCCCceEEEEECCCEEEEEeCC-----CeEEEEECCCCCEEEE--
Confidence 7777777754 45788888776532 22222222233344477777777765 4688999887653221
Q ss_pred CCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEEC-CCCCCCCcceEEEEECCEEEEEccCCCCceeeEE
Q psy17309 636 MRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHV 714 (824)
Q Consensus 636 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v 714 (824)
+........+...++..++.|+.+ ..+..||..+.+-... ...........++.+++..++.|+.++ .+
T Consensus 315 ~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg-----~v 384 (445)
T 2ovr_B 315 LTGHQSLTSGMELKDNILVSGNAD-----STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG-----TV 384 (445)
T ss_dssp ECCCCSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS-----EE
T ss_pred EcCCcccEEEEEEeCCEEEEEeCC-----CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCC-----eE
Confidence 222222333444566677777754 4688999877653222 211112223344556788888888765 68
Q ss_pred EEEECCCCcEE
Q psy17309 715 ECYDEKTDEWY 725 (824)
Q Consensus 715 ~~yd~~~~~W~ 725 (824)
.+||..+.+..
T Consensus 385 ~iwd~~~~~~~ 395 (445)
T 2ovr_B 385 KLWDLKTGEFI 395 (445)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcee
Confidence 89999887654
No 62
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.05 Score=57.50 Aligned_cols=190 Identities=14% Similarity=0.083 Sum_probs=106.7
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE--C--CEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--Q--DVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
++..++.|+.+ ..+..||....++..+..+.........+.. + +.+++.|+.+ ..+.+||..+.+|
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 91 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCce
Confidence 45566677654 3578888877777665554433222223333 2 6777777754 4588999999988
Q ss_pred EeecCCCcccCceEEEEE--C--CEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcce-EEEEE----------
Q psy17309 584 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGV-SCIAY---------- 648 (824)
Q Consensus 584 ~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~---------- 648 (824)
..+..+.........+.+ + +.+++.|+.+ ..+..||..+..-.....+....... +++..
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 776555433333333333 3 5677777755 36778888765311110111111111 22222
Q ss_pred ----CCEEEEEecCCCCCccceEEEEeCCCC--CEEECCCCCCCCcceEEEEE--C---CEEEEEccCCCCceeeEEEEE
Q psy17309 649 ----HECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVI--D---DMIFAIGGFNGVTTIYHVECY 717 (824)
Q Consensus 649 ----~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~~y 717 (824)
++.+++.|+.+ ..+.+||..+. .|..+..+.........+.+ + +++++.|+.++ .+.+|
T Consensus 167 ~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg-----~i~iw 236 (379)
T 3jrp_A 167 NGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIW 236 (379)
T ss_dssp ---CTTCEEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEE
T ss_pred cCCCCCCEEEEEeCC-----CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC-----EEEEE
Confidence 46778888764 35777877544 35444333322222333333 4 78899988765 47778
Q ss_pred ECCCC
Q psy17309 718 DEKTD 722 (824)
Q Consensus 718 d~~~~ 722 (824)
|..+.
T Consensus 237 d~~~~ 241 (379)
T 3jrp_A 237 TQDNE 241 (379)
T ss_dssp EESST
T ss_pred eCCCC
Confidence 87765
No 63
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.97 E-value=0.13 Score=56.07 Aligned_cols=213 Identities=13% Similarity=0.187 Sum_probs=117.9
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 554 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 554 (824)
..+..||..+.+-... ... ....-.++.. .+.+++.|+.+ ..+..||..+++-... +............
T Consensus 139 g~i~vwd~~~~~~~~~--~~~-h~~~v~~~~~-~~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~ 207 (445)
T 2ovr_B 139 NTLKVWSAVTGKCLRT--LVG-HTGGVWSSQM-RDNIIISGSTD-----RTLKVWNAETGECIHT--LYGHTSTVRCMHL 207 (445)
T ss_dssp SCEEEEETTTCCEEEE--CCC-CSSCEEEEEE-ETTEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEE
T ss_pred CcEEEEECCCCcEEEE--EcC-CCCCEEEEEe-cCCEEEEEeCC-----CeEEEEECCcCcEEEE--ECCCCCcEEEEEe
Confidence 4688899887764431 111 1112223333 35566677654 4588999988753321 2111122223333
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE 634 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 634 (824)
++..++.|+.+ ..+..||..+.+-... +........++..++..++.|+.+ ..+..||+.+.+-..
T Consensus 208 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~-- 273 (445)
T 2ovr_B 208 HEKRVVSGSRD-----ATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRRVVSGAYD-----FMVKVWDPETETCLH-- 273 (445)
T ss_dssp ETTEEEEEETT-----SEEEEEESSSCCEEEE--EECCSSCEEEEEECSSCEEEEETT-----SCEEEEEGGGTEEEE--
T ss_pred cCCEEEEEeCC-----CEEEEEECCCCcEEEE--EcCCcccEEEEEECCCEEEEEcCC-----CEEEEEECCCCcEeE--
Confidence 45556666643 5688899887653221 111222233444477778888765 468889987765322
Q ss_pred CCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEE
Q psy17309 635 PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHV 714 (824)
Q Consensus 635 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v 714 (824)
.+........++..++..++.|+.+ ..+..||..+.+-... +........+...++..++.|+.++ .+
T Consensus 274 ~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg-----~i 341 (445)
T 2ovr_B 274 TLQGHTNRVYSLQFDGIHVVSGSLD-----TSIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNADS-----TV 341 (445)
T ss_dssp EECCCSSCEEEEEECSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEETTS-----CE
T ss_pred EecCCCCceEEEEECCCEEEEEeCC-----CeEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCCC-----eE
Confidence 2222223334455588878888764 4688999877653221 1112222334445666778887665 58
Q ss_pred EEEECCCCcE
Q psy17309 715 ECYDEKTDEW 724 (824)
Q Consensus 715 ~~yd~~~~~W 724 (824)
.+||..+.+-
T Consensus 342 ~vwd~~~~~~ 351 (445)
T 2ovr_B 342 KIWDIKTGQC 351 (445)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcE
Confidence 8899877653
No 64
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.96 E-value=0.021 Score=56.78 Aligned_cols=152 Identities=13% Similarity=-0.006 Sum_probs=101.5
Q ss_pred EEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCC
Q psy17309 549 VSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECN 628 (824)
Q Consensus 549 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~ 628 (824)
.++...++.||+..|..+ .+.++|+.+.+=..-- ++..-.+.+++..+++||+.... .+.+.+||+++.
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~D~~Tl 126 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-----EGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-----SCEEEEEETTTT
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-----CCEEEEEECCcC
Confidence 566777999999998643 3899999998753323 55555566678889999998653 367999999887
Q ss_pred eEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEE-C--CCCCCCCcc-eEEEEECCEEEEEcc
Q psy17309 629 QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-V--PDMYNPRSN-FAIEVIDDMIFAIGG 704 (824)
Q Consensus 629 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~p~~r~~-~~~~~~~~~i~v~GG 704 (824)
+-. ..++.+..+.+.+.-+++||+.-| .+.+..+|+++.+-.. + ..-+.+... -.+...+++||+--
T Consensus 127 ~~~--~ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv- 197 (268)
T 3nok_A 127 QRE--RTTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI- 197 (268)
T ss_dssp EEE--EEEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred cEE--EEEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE-
Confidence 643 223333445677777889999876 3689999999865332 2 111111111 12344589988642
Q ss_pred CCCCceeeEEEEEECCCCcE
Q psy17309 705 FNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~W 724 (824)
+ ..+.|.+.||++.+=
T Consensus 198 w----~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 198 W----HSSDVLEIDPATGTV 213 (268)
T ss_dssp T----TCSEEEEECTTTCBE
T ss_pred C----CCCeEEEEeCCCCcE
Confidence 2 234899999999753
No 65
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.96 E-value=0.4 Score=48.46 Aligned_cols=217 Identities=9% Similarity=-0.044 Sum_probs=118.4
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..+..||+. .+...+..+. ....-++++.. ++.+|+.... ...+.+||+. +++...........-++++.
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~ 111 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPT--PDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQPDSGPYGITE 111 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS--TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CeEEEECCC-CceEEEECCC--CCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCCCCCCCCccceE
Confidence 568889988 6666543221 11223344443 5678876531 2468999998 77765432212223334444
Q ss_pred E-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcc-cCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeE
Q psy17309 554 H-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE-RSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQW 630 (824)
Q Consensus 554 ~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 630 (824)
. ++.+|+.... ...+.+||+. .+..... ++.. ....+++.- +++||+.... ...+.+||+ +++.
T Consensus 112 ~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~ 178 (300)
T 2qc5_A 112 GLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKL 178 (300)
T ss_dssp CSTTCEEEEETT-----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCE
T ss_pred CCCCCEEEEccC-----CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcE
Confidence 3 6788887532 2578999988 6655432 2211 222233332 5778886432 246889998 6666
Q ss_pred EEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCC
Q psy17309 631 TLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFN 706 (824)
Q Consensus 631 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 706 (824)
.... ++..........+ ++.||+.... ...+.+||+ +.++.... ++..........+ +++||+....+
T Consensus 179 ~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 179 EEYP-LPTNAAAPVGITSGNDGALWFVEIM-----GNKIGRITT-TGEISEYD-IPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp EEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred EEee-CCCCCCCcceEEECCCCCEEEEccC-----CCEEEEEcC-CCcEEEEE-CCCCCCCceEEEECCCCCEEEeccCC
Confidence 6543 2222222333333 5789987642 246899998 55655542 1211222223333 57888875321
Q ss_pred CCceeeEEEEEECCCCcEEec
Q psy17309 707 GVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 707 ~~~~~~~v~~yd~~~~~W~~~ 727 (824)
+.+.+||+ +.+....
T Consensus 251 -----~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 251 -----NQIGRITN-DNTIQEY 265 (300)
T ss_dssp -----TEEEEECT-TSCEEEE
T ss_pred -----CeEEEECC-CCcEEEE
Confidence 26888998 4555543
No 66
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.89 E-value=0.33 Score=49.08 Aligned_cols=212 Identities=8% Similarity=-0.035 Sum_probs=113.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..+..||+. .+...+..+. ....-++++.. ++.+|+.... ...++++|+ +++............-.+++.
T Consensus 78 ~~i~~~~~~-g~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~ 148 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYTLPN--PDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPNKGSYPSFITL 148 (299)
T ss_dssp TEEEEECTT-SCEEEEECSS--TTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred CeEEEECCC-CcEEEEeCCC--cCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCCCCCCCceEEE
Confidence 357788876 4454432211 12233444444 5788886532 256889999 666655432211222334444
Q ss_pred E-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccC-ceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeE
Q psy17309 554 H-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERS-DASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQW 630 (824)
Q Consensus 554 ~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 630 (824)
. ++.+|+... ....+++||+ +.+..... ++.... ..+++.- ++.||+.... .+.+.+||+ +++.
T Consensus 149 ~~~g~l~v~~~-----~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 149 GSDNALWFTEN-----QNNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEI 215 (299)
T ss_dssp CTTSCEEEEET-----TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCE
T ss_pred cCCCCEEEEeC-----CCCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcE
Confidence 3 578888653 1257899999 77776542 121112 2233332 5788886532 246889999 7776
Q ss_pred EEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCC-CCcceEEEEECCEEEEEccCCC
Q psy17309 631 TLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN-PRSNFAIEVIDDMIFAIGGFNG 707 (824)
Q Consensus 631 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~ 707 (824)
.... ++........+.+ +|.||+.... .+.+.+||+. .+..... .+. ...-.+++.-++.||+... .
T Consensus 216 ~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~~-g~~~~~~-~~~~~~~~~~i~~~~g~l~v~~~-~- 285 (299)
T 2z2n_A 216 TEFK-IPTPNARPHAITAGAGIDLWFTEWG-----ANKIGRLTSN-NIIEEYP-IQIKSAEPHGICFDGETIWFAME-C- 285 (299)
T ss_dssp EEEE-CSSTTCCEEEEEECSTTCEEEEETT-----TTEEEEEETT-TEEEEEE-CSSSSCCEEEEEECSSCEEEEET-T-
T ss_pred EEEE-CCCCCCCceeEEECCCCCEEEeccC-----CceEEEECCC-CceEEEe-CCCCCCccceEEecCCCEEEEec-C-
Confidence 6542 2222222333333 5788887532 2578899983 4444432 111 1122333335678888753 1
Q ss_pred CceeeEEEEEECCCC
Q psy17309 708 VTTIYHVECYDEKTD 722 (824)
Q Consensus 708 ~~~~~~v~~yd~~~~ 722 (824)
+.+.+||++++
T Consensus 286 ----~~l~~~~~~~~ 296 (299)
T 2z2n_A 286 ----DKIGKLTLIKD 296 (299)
T ss_dssp ----TEEEEEEEC--
T ss_pred ----CcEEEEEcCcc
Confidence 25788888765
No 67
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=96.86 E-value=7e-05 Score=62.79 Aligned_cols=63 Identities=19% Similarity=0.178 Sum_probs=48.1
Q ss_pred eeecceEEEE-c--ccccccccceeEEeeecccchhhhheeec-----c---ccee---cCHhhHHHHHHHHhhcCh
Q psy17309 227 AVHQDVIYAM-G--GYNGQRRQNSVEKYNYTENQDKIEEKKLF-----E---RKLH---ITEDNVASLLLATDFFCM 289 (824)
Q Consensus 227 ~~~~~~~~~~-~--g~~~e~~~~~i~l~~~~~~~~~~ll~~~Y-----t---~~l~---l~~~~v~~ll~~a~~~~i 289 (824)
+..+.+|..| . |.+.|+.+..|.++++++.+++.+++|+| + +++. ++.+++.+|+.||++|+.
T Consensus 21 A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 21 ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 97 (97)
T ss_dssp HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHTC
T ss_pred HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhCC
Confidence 5667777777 2 35677788899999999999999999999 5 6777 999999999999999873
No 68
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.83 E-value=0.042 Score=59.95 Aligned_cols=215 Identities=11% Similarity=0.135 Sum_probs=107.5
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEE-eccCCCCcceEEEEEE
Q psy17309 476 FVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE-IAPMNFKRCYVSTAVH 554 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~ 554 (824)
.+..||..+.+-...-. ............+..++.|+.+ ..+..||..+..-.. ...+.........+..
T Consensus 194 ~i~vwd~~~~~~~~~~~----~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLI----HHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp CEEEEESSSCCEEEEEC----CCCSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred eEEEEECCCCcEEEEEc----CCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 46677776665432111 0111112222244466666644 357888887654221 1111111222223333
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE 634 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 634 (824)
++..++.|+.+ ..+.+||..+.+-.. .+........+...++.+++.|+.+ ..+..||..+.+-..
T Consensus 265 ~~~~l~s~~~d-----g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~~-- 330 (435)
T 1p22_A 265 DDKYIVSASGD-----RTIKVWNTSTCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLR-- 330 (435)
T ss_dssp ETTEEEEEETT-----SEEEEEETTTCCEEE--EEECCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEE--
T ss_pred CCCEEEEEeCC-----CeEEEEECCcCcEEE--EEcCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCCCCEEE--
Confidence 66666666643 568899988765322 1222222233444466677777755 468899988765322
Q ss_pred CCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC----------EEECCCCCCCCcceEEEEECCEEEEEcc
Q psy17309 635 PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT----------WSQVPDMYNPRSNFAIEVIDDMIFAIGG 704 (824)
Q Consensus 635 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~----------W~~~~~~p~~r~~~~~~~~~~~i~v~GG 704 (824)
.+........++..++..++.|+.+ ..+.+||+.+.. -..+..- ......+..++..++.||
T Consensus 331 ~~~~h~~~v~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~h---~~~v~~l~~~~~~l~s~s 402 (435)
T 1p22_A 331 VLEGHEELVRCIRFDNKRIVSGAYD-----GKIKVWDLVAALDPRAPAGTLCLRTLVEH---SGRVFRLQFDEFQIVSSS 402 (435)
T ss_dssp EECCCSSCEEEEECCSSEEEEEETT-----SCEEEEEHHHHTSTTSCTTTTEEEEECCC---SSCCCCEEECSSCEEECC
T ss_pred EEeCCcCcEEEEEecCCEEEEEeCC-----CcEEEEECCCCCCccccccchheeeccCC---CCCeEEEEeCCCEEEEEe
Confidence 1222223334455588888888864 457788864432 1111111 111122334888888888
Q ss_pred CCCCceeeEEEEEECCCCcEEe
Q psy17309 705 FNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
.++ .+.+||..++.-..
T Consensus 403 ~Dg-----~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 403 HDD-----TILIWDFLNDPAAQ 419 (435)
T ss_dssp SSS-----EEEEEC--------
T ss_pred CCC-----EEEEEECCCCCCcc
Confidence 765 68888887765433
No 69
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.82 E-value=0.033 Score=60.47 Aligned_cols=223 Identities=10% Similarity=-0.009 Sum_probs=117.3
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCC---CCcceEEE
Q psy17309 476 FVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN---FKRCYVST 551 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~---~~r~~~~~ 551 (824)
.++.+|+.+..+..+...+.+ ....+++.. ++.+++.++.+ ..+..||+.+++.....+.. .+......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~ 174 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG--FQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVET 174 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS--SCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEE
T ss_pred EEEEECCCCCcceEEEEEcCC--CCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeE
Confidence 577788876655443221111 111122222 67888877643 35999999988776543321 11222222
Q ss_pred EEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCC
Q psy17309 552 AVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPEC 627 (824)
Q Consensus 552 ~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~ 627 (824)
+.. ++.+++.|+.+ ..+.+||+.+.+....-. .....-.+++.. +..+|+.++.+ ..+..||+.+
T Consensus 175 ~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~ 243 (433)
T 3bws_A 175 ISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKT 243 (433)
T ss_dssp EEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTT
T ss_pred EEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCC
Confidence 333 67888888743 578999998865432211 111122233333 45677776543 4689999988
Q ss_pred CeEEEcCCCCCCCcceEEEEE-CCEEEEEecCCCCC---ccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEE
Q psy17309 628 NQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMS---RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFA 701 (824)
Q Consensus 628 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 701 (824)
.+....-+ ......+++.. +++.+++++..... .-..+.+||+.+.+-......+. ....++.. ++.+|+
T Consensus 244 ~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 244 KLEIRKTD--KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYV 319 (433)
T ss_dssp TEEEEECC--CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEE
T ss_pred CcEEEEec--CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEE
Confidence 87544322 22222223332 45444444432111 13478899998765433211111 11122222 347888
Q ss_pred EccCCCCceeeEEEEEECCCCcEE
Q psy17309 702 IGGFNGVTTIYHVECYDEKTDEWY 725 (824)
Q Consensus 702 ~GG~~~~~~~~~v~~yd~~~~~W~ 725 (824)
.++.++ .+.+||+.+.+-.
T Consensus 320 ~~~~~~-----~v~v~d~~~~~~~ 338 (433)
T 3bws_A 320 SDMCCS-----KIEVYDLKEKKVQ 338 (433)
T ss_dssp EETTTT-----EEEEEETTTTEEE
T ss_pred EecCCC-----EEEEEECCCCcEE
Confidence 876544 6889999876543
No 70
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.81 E-value=0.096 Score=62.07 Aligned_cols=239 Identities=10% Similarity=0.045 Sum_probs=133.6
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCC-CcceEEEEE
Q psy17309 476 FVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF-KRCYVSTAV 553 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~r~~~~~~~ 553 (824)
.+..||+.+.++..+..........-.+++.. ++.|++ |.. ...+++||+.+++++....... ...-.+++.
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~-----~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 457 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTY-----LGNISYYNTRLKKFQIIELEKNELLDVRVFYE 457 (781)
T ss_dssp CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EET-----TEEEEEECSSSCEEEECCSTTTCCCCEEEEEE
T ss_pred cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eec-----cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEE
Confidence 47889998877765421111111222334333 567776 322 1458999999999987764211 122223333
Q ss_pred E-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCC---cccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCC
Q psy17309 554 H-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN---VERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPEC 627 (824)
Q Consensus 554 ~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p---~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~ 627 (824)
. ++.|++... .-+.+||+.+++|+.....+ ........... +|.|++.. .. .-+.+||+.+
T Consensus 458 d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~-----~Gl~~~~~~~ 524 (781)
T 3v9f_A 458 DKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT-FG-----GGVGIYTPDM 524 (781)
T ss_dssp CTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE-SS-----SCEEEECTTC
T ss_pred CCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE-cC-----CCEEEEeCCC
Confidence 3 567777432 45899999999887664322 11111111222 57787742 11 3488999999
Q ss_pred CeEEEcCC---CCCCCcceEEEE-ECCEEEEEecCCCCCccceE-EEEeCCCCCEEECC---CCCCCCcceEEEEE-CCE
Q psy17309 628 NQWTLIEP---MRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNG-EKYNPVTKTWSQVP---DMYNPRSNFAIEVI-DDM 698 (824)
Q Consensus 628 ~~W~~~~~---~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v-~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~ 698 (824)
++++.... +|.... .+.+. -+|.||+... ..+ .+||+++++++... .+|.... .+++.- +|.
T Consensus 525 ~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~ 595 (781)
T 3v9f_A 525 QLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGN 595 (781)
T ss_dssp CEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSC
T ss_pred CeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCC
Confidence 99887753 222211 12222 2578887643 245 88999988877653 2443332 233332 678
Q ss_pred EEEEccCCCCceeeEEEEEECCCCcEEecc---CCCCCccceeEEEE--cCcccee
Q psy17309 699 IFAIGGFNGVTTIYHVECYDEKTDEWYEAT---DMNIYRSALSACVI--MGLPNVY 749 (824)
Q Consensus 699 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~--~~~~~~~ 749 (824)
|++.+. + -+.+|||++.++.... .++...+...++.. ++.+++.
T Consensus 596 lW~~t~-~------Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g 644 (781)
T 3v9f_A 596 IWASTN-T------GISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFG 644 (781)
T ss_dssp EEEECS-S------CEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEE
T ss_pred EEEEcC-C------ceEEEECCCCceEEecccCCccccccccCceEECCCCEEEEE
Confidence 888752 1 3788999999887762 35555443333333 3555543
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.79 E-value=0.043 Score=59.82 Aligned_cols=212 Identities=10% Similarity=0.148 Sum_probs=117.2
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 554 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 554 (824)
..+..||..+.+-...-.. ......+...++.+++.|+.+ ..+..||..+++-... +............
T Consensus 153 g~i~iwd~~~~~~~~~~~~----h~~~v~~l~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~ 221 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG----HTGSVLCLQYDERVIITGSSD-----STVRVWDVNTGEMLNT--LIHHCEAVLHLRF 221 (435)
T ss_dssp SCEEEEESSSCCEEEEECC----CSSCEEEEECCSSEEEEEETT-----SCEEEEESSSCCEEEE--ECCCCSCEEEEEC
T ss_pred CeEEEEeCCCCeEEEEEcC----CCCcEEEEEECCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcCCCCcEEEEEE
Confidence 4688899887665432111 111222233377788888765 3588999988764322 2112222233334
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEe-ecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEc
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSL-IAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLI 633 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 633 (824)
++..++.|+.+ ..+..||..+..-.. ...+........+...++..++.|+.+ ..+..||..+.+-..
T Consensus 222 ~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~- 290 (435)
T 1p22_A 222 NNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-----RTIKVWNTSTCEFVR- 290 (435)
T ss_dssp CTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTTCCEEE-
T ss_pred cCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCcCcEEE-
Confidence 55667777754 458888887654211 111112222233334466666777654 468889988765322
Q ss_pred CCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeE
Q psy17309 634 EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYH 713 (824)
Q Consensus 634 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 713 (824)
.+........++..++..++.|+.+ ..+..||..+.+-... +........++.+++..++.|+.++ .
T Consensus 291 -~~~~~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~sg~~dg-----~ 357 (435)
T 1p22_A 291 -TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRV--LEGHEELVRCIRFDNKRIVSGAYDG-----K 357 (435)
T ss_dssp -EEECCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEECCSSEEEEEETTS-----C
T ss_pred -EEcCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCCCCEEEE--EeCCcCcEEEEEecCCEEEEEeCCC-----c
Confidence 1222223334455577778888754 4688999887643221 1112222334455888888988765 5
Q ss_pred EEEEECCC
Q psy17309 714 VECYDEKT 721 (824)
Q Consensus 714 v~~yd~~~ 721 (824)
+.+||..+
T Consensus 358 i~vwd~~~ 365 (435)
T 1p22_A 358 IKVWDLVA 365 (435)
T ss_dssp EEEEEHHH
T ss_pred EEEEECCC
Confidence 77888654
No 72
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.78 E-value=0.54 Score=47.35 Aligned_cols=219 Identities=11% Similarity=0.059 Sum_probs=115.0
Q ss_pred ceEEEEECCCCcEEEcccCCC--CCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDP--MGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVS 550 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~--~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~ 550 (824)
..+..||+.......+..... .....-.++++. ++.+|+.+.. ....+.+||+....-..+..... ..-.+
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~~~~~~~~~~~-~~~~~ 125 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQFVRKFGATIL-QHPRG 125 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSCEEEEECTTTC-SCEEE
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCcEEEEecCccC-CCceE
Confidence 468889887554444322111 111233455553 6889988732 12568899965544444432111 12233
Q ss_pred EEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCC
Q psy17309 551 TAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECN 628 (824)
Q Consensus 551 ~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~ 628 (824)
++.. ++.+|+.... ...+.+||+.......+........-.+++.- ++++|+.+.. ...+.+||+...
T Consensus 126 i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~ 195 (286)
T 1q7f_A 126 VTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQ 195 (286)
T ss_dssp EEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG-----GTEEEEEETTCC
T ss_pred EEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC-----CCEEEEEcCCCC
Confidence 4433 6788887542 25789999876654444221111112233332 5889987543 257899998766
Q ss_pred eEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCC-CCCCCcceEEEE-ECCEEEEEcc
Q psy17309 629 QWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD-MYNPRSNFAIEV-IDDMIFAIGG 704 (824)
Q Consensus 629 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~i~v~GG 704 (824)
....+..-. .......+.+ +|.||+....++ ..+.+||+....-..+.. .+.. ...+++. -++++|+..
T Consensus 196 ~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~~~~~~~~-~~~~i~~~~~g~l~vs~- 268 (286)
T 1q7f_A 196 YLRQIGGEG-ITNYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISALESKVKHA-QCFDVALMDDGSVVLAS- 268 (286)
T ss_dssp EEEEESCTT-TSCSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEEEESSCCS-CEEEEEEETTTEEEEEE-
T ss_pred EEEEEccCC-ccCCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEEcccCCCC-cceeEEECCCCcEEEEC-
Confidence 544443211 1122233333 678999875321 278999986554333321 1111 1123333 278999884
Q ss_pred CCCCceeeEEEEEECC
Q psy17309 705 FNGVTTIYHVECYDEK 720 (824)
Q Consensus 705 ~~~~~~~~~v~~yd~~ 720 (824)
.+ +.+.+|+..
T Consensus 269 ~~-----~~v~v~~~~ 279 (286)
T 1q7f_A 269 KD-----YRLYIYRYV 279 (286)
T ss_dssp TT-----TEEEEEECS
T ss_pred CC-----CeEEEEEcc
Confidence 22 256777654
No 73
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.77 E-value=0.15 Score=51.06 Aligned_cols=212 Identities=15% Similarity=0.045 Sum_probs=112.2
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..+..||+.+.....+...... .-.+++.. ++.+|+... ...+++||+.+.....+..... ..-.+++.
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~~---~p~~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~ 115 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGLY---QPQGLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTVLPFDGL-NYPEGLAV 115 (270)
T ss_dssp CEEEEECC-----EECCCCSCC---SCCCEEECTTCCEEEEET------TTEEEEECTTCSCCEECCCCSC-SSEEEEEE
T ss_pred CcEEEecCCCcccceEeeCCcC---CcceeEECCCCCEEEEcC------CCEEEEEeCCCceEeeeecCCc-CCCcceEE
Confidence 4688888877665543222211 22334444 567888764 2468999998876554432111 12234444
Q ss_pred E-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEE
Q psy17309 554 H-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWT 631 (824)
Q Consensus 554 ~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 631 (824)
. ++.+|+.... ...+.+++..+.......... ...-.+++.- ++++|+.... ...+.+||+.+..-.
T Consensus 116 ~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 116 DTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQV 184 (270)
T ss_dssp CTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCCS-CCSCCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEE
T ss_pred CCCCCEEEEECC-----CCEEEEEECCCceeEeecccc-CCCceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceE
Confidence 3 6789987542 256888887766544322111 1112233333 5789987543 246889998876644
Q ss_pred EcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCC
Q psy17309 632 LIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 707 (824)
Q Consensus 632 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 707 (824)
..... .......+.+ +|.||+.... .+.+.+||+....-..... ........+.+ +++||+....++
T Consensus 185 ~~~~~--~~~~p~~i~~d~~g~l~v~~~~-----~~~v~~~~~~~~~~~~~~~--~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 185 VLPFT--DITAPWGIAVDEAGTVYVTEHN-----TNQVVKLLAGSTTSTVLPF--TGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp ECCCS--SCCSEEEEEECTTCCEEEEETT-----TSCEEEECTTCSCCEECCC--CSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred eeccc--CCCCceEEEECCCCCEEEEECC-----CCcEEEEcCCCCcceeecc--CCCCCceeEEECCCCCEEEEECCCC
Confidence 33211 1122233333 4689988643 2468999987654333221 11122233333 578888865432
Q ss_pred CceeeEEEEEECCC
Q psy17309 708 VTTIYHVECYDEKT 721 (824)
Q Consensus 708 ~~~~~~v~~yd~~~ 721 (824)
.|.+|+...
T Consensus 256 -----~v~~~~~~~ 264 (270)
T 1rwi_B 256 -----RVVKLTSLE 264 (270)
T ss_dssp -----EEEEECCCG
T ss_pred -----EEEEEcCCC
Confidence 678887654
No 74
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.75 E-value=0.12 Score=53.67 Aligned_cols=184 Identities=12% Similarity=0.093 Sum_probs=99.3
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEE-eccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE-IAPMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
++.+++.|+.+ ..+..||..+++-.. +..-+. .. .+++. -++..++.|+.+ ..+..||..+..-..
T Consensus 91 ~~~~l~s~s~D-----~~i~lWd~~~~~~~~~~~~~~~-~~-~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 91 TLPIAASSSLD-----AHIRLWDLENGKQIKSIDAGPV-DA-WTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEY 158 (321)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTT-CC-CCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCEEEEEeCCCc-cE-EEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeE
Confidence 45566677654 468889988875432 221111 11 12222 356777777643 567888887765322
Q ss_pred ecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCC
Q psy17309 586 IAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 662 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 662 (824)
.-.. ....-.+++.. +++.++.|+.+ ..+..||..+.+-... +........++.+ ++++++.|+.+
T Consensus 159 ~~~~-~~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~d--- 227 (321)
T 3ow8_A 159 SLDT-RGKFILSIAYSPDGKYLASGAID-----GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDD--- 227 (321)
T ss_dssp EEEC-SSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTT---
T ss_pred EecC-CCceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCC---
Confidence 1111 11111122222 67777787765 4688999988754322 1111111122223 67788888754
Q ss_pred ccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 663 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
..+.+||..+..-... +.........+.+ +++.++.|+.++ .+.+||..+.+
T Consensus 228 --g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~-----~v~iwd~~~~~ 281 (321)
T 3ow8_A 228 --GYIKIYDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDK-----SVKVWDVGTRT 281 (321)
T ss_dssp --SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTE
T ss_pred --CeEEEEECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCE
Confidence 4588899876654322 1111111222333 677888888765 57888987754
No 75
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.73 E-value=0.18 Score=59.74 Aligned_cols=238 Identities=11% Similarity=0.120 Sum_probs=132.8
Q ss_pred eEEEEECCCCcEEEcccCC-C----CCCCceeEEEEE-CCE-EEEEeecCCCcccceEEEEECCCCceEEeccCCC--C-
Q psy17309 476 FVETYDTRADRWVKIDQVD-P----MGPRAYHGTAVI-GYN-IYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF--K- 545 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~-~----~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~- 545 (824)
.+..||+.++++..+.... . .....-.+++.. ++. |++ |... ..+++||+.++++........ +
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~-----~Gl~~~d~~~~~~~~~~~~~~~l~~ 451 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA-----GGLSILHRNSGQVENFNQRNSQLVN 451 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT-----TEEEEEETTTCCEEEECTTTSCCSC
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc-----CceeEEeCCCCcEEEeecCCCCcCC
Confidence 4788999998887754322 0 112233444444 556 665 3221 358999999998887653211 1
Q ss_pred cceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCC--Ccc--cCceEEEEE--CCEEEEEcccCCCCcCC
Q psy17309 546 RCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM--NVE--RSDASATTL--QGKIYITGGFNGHNCLN 618 (824)
Q Consensus 546 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~--p~~--r~~~~~~~~--~~~lyv~GG~~~~~~~~ 618 (824)
..-.+++.. +|.|++... .-+.+||+.+++|+..... +.. ......... +|.|++... .
T Consensus 452 ~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~ 517 (795)
T 4a2l_A 452 ENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------E 517 (795)
T ss_dssp SCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------S
T ss_pred CeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-------C
Confidence 111222222 567777532 3489999999999877533 111 111112222 577887532 3
Q ss_pred ceEEEeCCCCeEEEcCCC---C-CCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECC---CCCCCCcc
Q psy17309 619 SCEVYDPECNQWTLIEPM---R-HRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP---DMYNPRSN 689 (824)
Q Consensus 619 ~v~~yd~~~~~W~~~~~~---p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~ 689 (824)
-+.+||+.++++ ..... + .+-....+... +|.||+... ..+.+||+.+++++... .+|... .
T Consensus 518 Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i 588 (795)
T 4a2l_A 518 GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNV-V 588 (795)
T ss_dssp CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCSC-E
T ss_pred ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchhh-e
Confidence 488999998888 44311 1 01111122222 578887543 25889999999888764 244322 1
Q ss_pred eEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCcEEecc---CCCCCccceeEEEE--cCcccee
Q psy17309 690 FAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT---DMNIYRSALSACVI--MGLPNVY 749 (824)
Q Consensus 690 ~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~--~~~~~~~ 749 (824)
.+++.- +|.|++.+. +-+.+|||++++++... .++...+...++.. ++.+++.
T Consensus 589 ~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g 647 (795)
T 4a2l_A 589 YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFG 647 (795)
T ss_dssp EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEE
T ss_pred EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEe
Confidence 222222 578888753 24788999999988762 35554443333333 3455543
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.72 E-value=0.63 Score=58.18 Aligned_cols=188 Identities=7% Similarity=0.075 Sum_probs=97.1
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 587 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~ 587 (824)
++..+++|+.+ ..+..||..+++..................-++..++.||.+ ..+..||..+.......
T Consensus 972 ~g~~l~~g~~~-----g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-----g~i~vwd~~~~~~~~~~ 1041 (1249)
T 3sfz_A 972 HLEYVAFGDED-----GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-----SVIQVWNWQTGDYVFLQ 1041 (1249)
T ss_dssp TSSEEEEEETT-----SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-----SBEEEEETTTTEEECCB
T ss_pred CCCEEEEEcCC-----CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCceEEEe
Confidence 44555556543 347788887765433221111111112222356677777643 46889999888765443
Q ss_pred CCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceE
Q psy17309 588 PMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNG 667 (824)
Q Consensus 588 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v 667 (824)
... ..-.+++...+..++.|+.+ ..+..||..+++-...-..........+..-+++.++.|+.+ ..+
T Consensus 1042 ~~~--~~v~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d-----~~v 1109 (1249)
T 3sfz_A 1042 AHQ--ETVKDFRLLQDSRLLSWSFD-----GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSAD-----KTA 1109 (1249)
T ss_dssp CCS--SCEEEEEECSSSEEEEEESS-----SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCS-----SCC
T ss_pred cCC--CcEEEEEEcCCCcEEEEECC-----CcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCC-----CcE
Confidence 222 12222333333344556554 468889987765321111111112222223367777777754 356
Q ss_pred EEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 668 EKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 668 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
.+||..+.+ .+..+........++.+ ++++++.|+.++ .+.+||..+.+-
T Consensus 1110 ~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg-----~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1110 KIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNG-----EIRIWNVSDGQL 1161 (1249)
T ss_dssp CEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTS-----CCCEEESSSSCC
T ss_pred EEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCce
Confidence 678876543 22222222222223333 788888888765 477888877543
No 77
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.71 E-value=0.1 Score=52.30 Aligned_cols=193 Identities=13% Similarity=0.035 Sum_probs=100.8
Q ss_pred eEEEEE-CCEEEE-EeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeC
Q psy17309 502 HGTAVI-GYNIYV-IGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNY 578 (824)
Q Consensus 502 ~~~~~~-~~~lyv-~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~ 578 (824)
.+++.. ++.+|+ .... ...+.+||+.+........... ..-.+++.. ++.+|+... ...+.+||+
T Consensus 27 ~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~------~~~i~~~d~ 94 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF------NNRVVTLAA 94 (270)
T ss_dssp EEEEECTTCCEEEEECSS-----SCEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET------TTEEEEECT
T ss_pred cceEECCCCCEEEEccCC-----CCcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC------CCEEEEEeC
Confidence 344443 567888 4221 2568889987766554332211 112234443 568888764 257899999
Q ss_pred CCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEe
Q psy17309 579 TENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIG 656 (824)
Q Consensus 579 ~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~G 656 (824)
.+......... ......+++.- ++++|+.... ...+.+||..+........... ..-.+++.. +++||+..
T Consensus 95 ~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~ 167 (270)
T 1rwi_B 95 GSNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTD 167 (270)
T ss_dssp TCSCCEECCCC-SCSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEE
T ss_pred CCceEeeeecC-CcCCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEE
Confidence 88765443211 11122333333 6789987543 2468888877665443321111 111223333 57899876
Q ss_pred cCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 657 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 657 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
.. ...+.+||+....-........ ..-.+++.- ++.||+....++ .+.+||+.+..-
T Consensus 168 ~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~~-----~v~~~~~~~~~~ 225 (270)
T 1rwi_B 168 TD-----NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNTN-----QVVKLLAGSTTS 225 (270)
T ss_dssp GG-----GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTTS-----CEEEECTTCSCC
T ss_pred CC-----CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCCC-----cEEEEcCCCCcc
Confidence 53 2578999998766544321111 112233332 568888764322 588899877543
No 78
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.71 E-value=0.2 Score=51.83 Aligned_cols=241 Identities=8% Similarity=-0.027 Sum_probs=116.0
Q ss_pred ceEEEEECC--CCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCc-eEEeccCCCCcceE
Q psy17309 475 DFVETYDTR--ADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV-WKEIAPMNFKRCYV 549 (824)
Q Consensus 475 ~~~~~yd~~--~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~r~~~ 549 (824)
..+..|+.. +.++..+.....+. .-..++.. +..+|+.+.. ...+..||...+. ...+...+....-+
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 132 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPG--SLTHISTDHQGQFVFVGSYN-----AGNVSVTRLEDGLPVGVVDVVEGLDGCH 132 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSS--CCSEEEECTTSSEEEEEETT-----TTEEEEEEEETTEEEEEEEEECCCTTBC
T ss_pred CeEEEEEecCCCCceeeccccccCC--CCcEEEEcCCCCEEEEEecC-----CCeEEEEECCCCccccccccccCCCCce
Confidence 467777765 66766542221111 22233333 3456665532 2457788874222 22222222222222
Q ss_pred EEEEE-C-CEEEEEecccCCCCCCeEEEEeCCC-CcEEeec----CCCcccCceEEEEE-CC-EEEEEcccCCCCcCCce
Q psy17309 550 STAVH-Q-DVIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIA----PMNVERSDASATTL-QG-KIYITGGFNGHNCLNSC 620 (824)
Q Consensus 550 ~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~t-~~W~~~~----~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v 620 (824)
.++.. + ..+|+.+..+ ..+.+||..+ .+...+. ..+.......++.. ++ .+|+.+..+ ..+
T Consensus 133 ~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~-----~~i 202 (343)
T 1ri6_A 133 SANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN-----SSV 202 (343)
T ss_dssp CCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT-----TEE
T ss_pred EEEECCCCCEEEEecCCC-----CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC-----CEE
Confidence 33333 3 3677765322 5688999887 6665432 12211111122222 34 577765432 467
Q ss_pred EEEeCC--CCeEEE---cCCCCCC---CcceEEEEE--CC-EEEEEecCCCCCccceEEEEeCC--CCCEEECCCCCCCC
Q psy17309 621 EVYDPE--CNQWTL---IEPMRHR---RSGVSCIAY--HE-CIYVIGGFNGMSRMCNGEKYNPV--TKTWSQVPDMYNPR 687 (824)
Q Consensus 621 ~~yd~~--~~~W~~---~~~~p~~---r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~~r 687 (824)
..||.. +.++.. +..++.. ......+.+ ++ .||+.+.. ...+.+||+. +.+++.+..++...
T Consensus 203 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-----~~~i~v~d~~~~~~~~~~~~~~~~~~ 277 (343)
T 1ri6_A 203 DVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-----ASLITVFSVSEDGSVLSKEGFQPTET 277 (343)
T ss_dssp EEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT-----TTEEEEEEECTTSCCEEEEEEEECSS
T ss_pred EEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC-----CCEEEEEEEcCCCCceEEeeeecCCC
Confidence 888874 444432 2333332 122222333 34 57666543 2467888877 55666664433322
Q ss_pred cceEEEEE-CC-EEEEEccCCCCceeeEEEEEECCCCcEEeccCCCCCccceeEE
Q psy17309 688 SNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSAC 740 (824)
Q Consensus 688 ~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 740 (824)
.-.+++.. ++ .||+.++.++ .-.+|..|+++.+++.+..++....-.+++
T Consensus 278 ~~~~~~~s~dg~~l~~~~~~~~---~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~ 329 (343)
T 1ri6_A 278 QPRGFNVDHSGKYLIAAGQKSH---HISVYEIVGEQGLLHEKGRYAVGQGPMWVV 329 (343)
T ss_dssp SCCCEEECTTSSEEEEECTTTC---EEEEEEEETTTTEEEEEEEEECSSSCCEEE
T ss_pred ccceEEECCCCCEEEEecCCCC---eEEEEEEcCCCceeeEccccccCCCCeeEE
Confidence 22222322 44 4666553332 123555588899998887666543333333
No 79
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.70 E-value=0.62 Score=46.90 Aligned_cols=194 Identities=10% Similarity=0.007 Sum_probs=104.8
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCC----CCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCC
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN----FKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTEN 581 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~----~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~ 581 (824)
++.+|+.+.. ...+.+||+.......++... ....-.+++.. ++.+|+.+... ...+.+||+...
T Consensus 40 ~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~----~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP----THQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG----GCEEEEECTTSC
T ss_pred CCCEEEEECC-----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC----CCEEEEECCCCc
Confidence 5678877542 256889998855444443211 01123445553 67999986321 257899996555
Q ss_pred cEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecC
Q psy17309 582 QWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGF 658 (824)
Q Consensus 582 ~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 658 (824)
.-..+... ......++++- ++++|+....+ ..+.+||+.......+.... .......+.+ +++||+....
T Consensus 111 ~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 111 FVRKFGAT-ILQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp EEEEECTT-TCSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTT-TCSSEEEEEECSSSEEEEEEGG
T ss_pred EEEEecCc-cCCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCC-ccCCcEEEEECCCCCEEEEECC
Confidence 44434221 11112233332 67899875432 46889998766544443211 1112223333 5889988653
Q ss_pred CCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 659 NGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 659 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
...+.+||+.......+..-.. ......+++ +++||+....+. ..+.+||++...-..+
T Consensus 184 -----~~~i~~~~~~g~~~~~~~~~g~-~~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 184 -----AHCVKVFNYEGQYLRQIGGEGI-TNYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISAL 244 (286)
T ss_dssp -----GTEEEEEETTCCEEEEESCTTT-SCSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEE
T ss_pred -----CCEEEEEcCCCCEEEEEccCCc-cCCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEE
Confidence 3578999987654444432110 112222333 678888864331 1688999776543333
No 80
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.67 E-value=0.52 Score=49.10 Aligned_cols=215 Identities=11% Similarity=0.124 Sum_probs=109.4
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCc--eEEeccCCCCc-ceEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKR-CYVS 550 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r-~~~~ 550 (824)
..+..||..+.+-... .+.. ...-.+++.. ++..++.||.+ ..+..||..+.. ......+.... .-.+
T Consensus 77 g~v~iWd~~~~~~~~~--~~~~-~~~v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~ 148 (340)
T 1got_B 77 GKLIIWDSYTTNKVHA--IPLR-SSWVMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNVRVSRELAGHTGYLSC 148 (340)
T ss_dssp TEEEEEETTTCCEEEE--EECS-SSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSCEEEEEEECCSSCEEE
T ss_pred CcEEEEECCCCCcceE--eecC-CccEEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcceeEEEecCCCccEEE
Confidence 4678888776654321 1111 1112222222 56677777754 457888887643 22111111111 1112
Q ss_pred EEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCce-EEEEE-CCEEEEEcccCCCCcCCceEEEeCCC
Q psy17309 551 TAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDA-SATTL-QGKIYITGGFNGHNCLNSCEVYDPEC 627 (824)
Q Consensus 551 ~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~ 627 (824)
+.. -++. ++.|+.+ ..+..||+.+.+-... +....... +++.. ++.+++.|+.+ ..+..||..+
T Consensus 149 ~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~~~ 215 (340)
T 1got_B 149 CRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD-----ASAKLWDVRE 215 (340)
T ss_dssp EEEEETTE-EEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTT
T ss_pred EEECCCCc-EEEEECC-----CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEECCC
Confidence 222 3555 4455533 4588899888764321 21111112 22222 56788888765 4688899877
Q ss_pred CeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEc
Q psy17309 628 NQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIG 703 (824)
Q Consensus 628 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 703 (824)
..-... +........++.+ ++..++.|+.+ ..+..||..+.+-...-..+........+.+ ++++++.|
T Consensus 216 ~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g 288 (340)
T 1got_B 216 GMCRQT--FTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 288 (340)
T ss_dssp CSEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred CeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEE
Confidence 653221 1111122223333 67788888764 4678899877643221111111112222333 67888888
Q ss_pred cCCCCceeeEEEEEECCCC
Q psy17309 704 GFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 704 G~~~~~~~~~v~~yd~~~~ 722 (824)
+.++ .+.+||..+.
T Consensus 289 ~~d~-----~i~vwd~~~~ 302 (340)
T 1got_B 289 YDDF-----NCNVWDALKA 302 (340)
T ss_dssp ETTS-----EEEEEETTTC
T ss_pred CCCC-----eEEEEEcccC
Confidence 8765 6888997664
No 81
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.65 E-value=0.27 Score=53.15 Aligned_cols=228 Identities=7% Similarity=-0.078 Sum_probs=124.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..+..+|.....-..+... .....+.+.. +++.+++++.++. ...++.+|+.+++...+...+. ...+.+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~----~~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~~~--~~~~~~~ 230 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS----PQPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFPR--HNGAPAF 230 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE----SSCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEECCSS--CEEEEEE
T ss_pred ceEEEEcCCCCCCEEEeCC----CCcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeecCCC--cccCEEE
Confidence 6788888876544433211 1112222222 5555566654322 2579999999988776654432 2223333
Q ss_pred E-CCE-EEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCe
Q psy17309 554 H-QDV-IYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ 629 (824)
Q Consensus 554 ~-~~~-iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 629 (824)
. +++ |++.+..++ ...++.+|+.+.+...+...+. ....... +++.+++++..+ ....++.+|..+.+
T Consensus 231 spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 231 SPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGA 302 (415)
T ss_dssp CTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSC
T ss_pred cCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEECCC--CCcEEEEEECCCCC
Confidence 2 554 554544322 3579999999988766544321 1222222 555444444321 12468889998876
Q ss_pred EEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEE-ECCEEEEEccCC
Q psy17309 630 WTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV-IDDMIFAIGGFN 706 (824)
Q Consensus 630 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~ 706 (824)
-..+... .. ....+.+ +++.+++++.... ...++.+|+.+.+...+.... ...+.+. -+++.+++++.+
T Consensus 303 ~~~l~~~--~~-~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 303 PQRITWE--GS-QNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp CEECCCS--SS-EEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEE
T ss_pred EEEEecC--CC-cccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcC
Confidence 5544321 11 2222232 5665555553221 357999999998887765322 1222222 267766666654
Q ss_pred CCceeeEEEEEECCCCcEEecc
Q psy17309 707 GVTTIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 707 ~~~~~~~v~~yd~~~~~W~~~~ 728 (824)
++ ...++++|.+.+....+.
T Consensus 375 ~~--~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 375 GM--GSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp TT--EEEEEEEETTSCCEEECC
T ss_pred CC--ccEEEEEECCCCcEEEee
Confidence 33 347999999887766663
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.64 E-value=0.48 Score=51.68 Aligned_cols=218 Identities=11% Similarity=0.130 Sum_probs=116.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE---CCEEEEEeecCCCcccceEEEEECCCCceEEe------------
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI------------ 539 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~------------ 539 (824)
..+..||..+.+-...-. . ....-.++... ++..++.|+.+ ..+..||..+..-...
T Consensus 183 g~i~vwd~~~~~~~~~~~--~-h~~~v~~l~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 254 (464)
T 3v7d_B 183 RTVRVWDIKKGCCTHVFE--G-HNSTVRCLDIVEYKNIKYIVTGSRD-----NTLHVWKLPKESSVPDHGEEHDYPLVFH 254 (464)
T ss_dssp SCEEEEETTTTEEEEEEC--C-CSSCEEEEEEEESSSCEEEEEEETT-----SCEEEEECCCCCCC------CCSSEEES
T ss_pred CCEEEEECCCCcEEEEEC--C-CCCccEEEEEecCCCCCEEEEEcCC-----CcEEEeeCCCCcccccccccCCcceEee
Confidence 357888888776443211 1 11122233333 45777787754 3577788776542110
Q ss_pred ---------ccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCce-EEEEE-CCEEEEE
Q psy17309 540 ---------APMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDA-SATTL-QGKIYIT 608 (824)
Q Consensus 540 ---------~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~ 608 (824)
..+............++..++.|+.+ ..+..||..+.+-... +....... +++.. ++..++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s 327 (464)
T 3v7d_B 255 TPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD-----NTLIVWDVAQMKCLYI--LSGHTDRIYSTIYDHERKRCIS 327 (464)
T ss_dssp CGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTTTEEEE
T ss_pred ccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--ecCCCCCEEEEEEcCCCCEEEE
Confidence 00001111112223455666667644 4588899887653322 11111112 22222 5666777
Q ss_pred cccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCc
Q psy17309 609 GGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRS 688 (824)
Q Consensus 609 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 688 (824)
|+.+ ..+..||..+.+-.. .+........++..++..++.|+.+ ..+.+||+.+..-..... .....
T Consensus 328 g~~d-----g~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~~~~~~~~~~~-~~~~~ 394 (464)
T 3v7d_B 328 ASMD-----TTIRIWDLENGELMY--TLQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDANDYSRKFSYH-HTNLS 394 (464)
T ss_dssp EETT-----SCEEEEETTTTEEEE--EECCCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEEEEE-CTTCC
T ss_pred EeCC-----CcEEEEECCCCcEEE--EEeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEECCCCceeeeec-CCCCc
Confidence 7755 468899988765322 2222333345556677777777754 468899988754222111 11122
Q ss_pred ceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEe
Q psy17309 689 NFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 689 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
...+...++++++.|+ ++ .+.+||..+.+-..
T Consensus 395 ~~~~~~~~~~~l~~~~-dg-----~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 395 AITTFYVSDNILVSGS-EN-----QFNIYNLRSGKLVH 426 (464)
T ss_dssp CEEEEEECSSEEEEEE-TT-----EEEEEETTTCCEEE
T ss_pred cEEEEEeCCCEEEEec-CC-----eEEEEECCCCcEEe
Confidence 2334455788888876 33 68999999876554
No 83
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.036 Score=65.47 Aligned_cols=241 Identities=11% Similarity=0.188 Sum_probs=127.0
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-C--CEEEEEeecCCCcccceEEEEECCCCce
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-G--YNIYVIGGFDGNEYYNSCRCFNAVTKVW 536 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~yd~~~~~W 536 (824)
+..++.|+. ...+..||....++..+..... ....-.+++.. + +..++.|+.+ ..+..||..+++|
T Consensus 21 g~~latg~~-----dg~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~ 89 (753)
T 3jro_A 21 GKRLATCSS-----DKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 89 (753)
T ss_dssp SCCEEEEET-----TTEEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCeEEEEEC-----CCcEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcc
Confidence 344556653 2468888887666655322111 11222233332 3 6777788765 3588899999888
Q ss_pred EEeccCCCCcceEEEEEE--C--CEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-----------
Q psy17309 537 KEIAPMNFKRCYVSTAVH--Q--DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----------- 601 (824)
Q Consensus 537 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~----------- 601 (824)
..+..+.........+.. + +.+++.|+.+ ..+..||..+..-.....+.........+..
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 766655433333333333 3 6778888754 4688888876531111011111111111111
Q ss_pred ----CCEEEEEcccCCCCcCCceEEEeCCCC--eEEEcCCCCCCCcceEEEEE--C---CEEEEEecCCCCCccceEEEE
Q psy17309 602 ----QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCIAY--H---ECIYVIGGFNGMSRMCNGEKY 670 (824)
Q Consensus 602 ----~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~iyv~GG~~~~~~~~~v~~y 670 (824)
++.+++.|+.++ .+..||..+. .+.....+........++.+ + +.+++.||.+ ..+.+|
T Consensus 165 ~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D-----g~I~iw 234 (753)
T 3jro_A 165 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-----RTCIIW 234 (753)
T ss_dssp --CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS-----SCEEEE
T ss_pred ccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC-----CEEEEe
Confidence 356777777653 5777876554 44444433332333333333 3 6888888864 457788
Q ss_pred eCCCCC--EEE-CCCCC-CCCcceEEEE-ECCEEEEEccCCCCceeeEEEEEECC-CCcEEeccCCC
Q psy17309 671 NPVTKT--WSQ-VPDMY-NPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEK-TDEWYEATDMN 731 (824)
Q Consensus 671 d~~~~~--W~~-~~~~p-~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p 731 (824)
|+.+.+ +.. +.... ....-.+++. -+++.++.||.++ .+.+||.. ...|.......
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg-----~I~vwd~~~~~~~~~~~~~~ 296 (753)
T 3jro_A 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEVH 296 (753)
T ss_dssp EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS-----CEECCBCCSSSCCBCCCCBC
T ss_pred cCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC-----EEEEEecCCCCCcccccccc
Confidence 877642 111 11111 1111112222 2778888888765 47788877 45677665443
No 84
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.57 E-value=0.76 Score=46.31 Aligned_cols=193 Identities=10% Similarity=0.023 Sum_probs=105.9
Q ss_pred EEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCC
Q psy17309 503 GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTE 580 (824)
Q Consensus 503 ~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t 580 (824)
+++.. ++.+|+.... ...+.+||+. ++............-++++.. ++.+|+.... ...+.+||+.
T Consensus 24 ~i~~d~~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~- 91 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK- 91 (300)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-
T ss_pred eeeECCCCCEEEEcCC-----CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-
Confidence 34433 5778886531 2568899988 777654322111222334433 5788887532 2568999998
Q ss_pred CcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEec
Q psy17309 581 NQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGG 657 (824)
Q Consensus 581 ~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 657 (824)
.++...........-++++.- ++.+|+.... ...+.+||+. ++..... ++..........+ +++||+...
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEET
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEec
Confidence 666544321112222333333 6788887532 2468899987 6655432 2222222223333 578888763
Q ss_pred CCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 658 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
. ...+.+||+ +.+..... ++..........+ ++.||+..... ..+.+||+ +.++...
T Consensus 165 ~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~-----~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 165 Q-----NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIMG-----NKIGRITT-TGEISEY 223 (300)
T ss_dssp T-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT-----TEEEEECT-TCCEEEE
T ss_pred C-----CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccCC-----CEEEEEcC-CCcEEEE
Confidence 2 246899998 66666542 2222122222333 57888875322 26889998 5566554
No 85
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.52 E-value=0.2 Score=54.18 Aligned_cols=241 Identities=13% Similarity=0.029 Sum_probs=121.9
Q ss_pred CCEEEEEccCCCCCCCceEEEEECCCCcEEEcccC-CCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCc
Q psy17309 459 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQV-DPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV 535 (824)
Q Consensus 459 ~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 535 (824)
.+.+++.++.. ..+..||+.+.+....... ...........+.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 133 ~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-----NAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCC
T ss_pred CCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-----CEEEEEECCCce
Confidence 34566666432 3588999998876652111 11111112222333 77888888643 568999998866
Q ss_pred eEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccC
Q psy17309 536 WKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFN 612 (824)
Q Consensus 536 W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~ 612 (824)
....-... ...-.+++.. +..+|+.++.+ ..+.+||+.+.+....-+. ...-.+++.. +++.+++++..
T Consensus 203 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 203 YKATVDLT-GKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp EEEEEECS-SSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEE
T ss_pred EEEEEcCC-CCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECC
Confidence 43221111 1122233333 34677776532 4799999988765433222 2122233332 45444444432
Q ss_pred CCC---cCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCC
Q psy17309 613 GHN---CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 687 (824)
Q Consensus 613 ~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 687 (824)
... ....+..||+.+.+-......+. ....++.. ++ .+|+.++.+ ..+.+||+.+.+-... ++...
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~--~~~~~ 345 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKS--IPVFD 345 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEE--EECSS
T ss_pred CCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEE--ecCCC
Confidence 211 13578899998876433321111 11122222 34 688887643 5789999986643322 22221
Q ss_pred cceEEEEE-CCEEEEEccCCCCc----------eeeEEEEEECCCCcEEe
Q psy17309 688 SNFAIEVI-DDMIFAIGGFNGVT----------TIYHVECYDEKTDEWYE 726 (824)
Q Consensus 688 ~~~~~~~~-~~~i~v~GG~~~~~----------~~~~v~~yd~~~~~W~~ 726 (824)
...+++.. +++.+++++..... .-..+.+||+.+.+...
T Consensus 346 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 346 KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 22233322 45444444332210 01378999998876544
No 86
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.48 E-value=0.15 Score=60.37 Aligned_cols=210 Identities=9% Similarity=0.037 Sum_probs=121.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCC---C-CcceE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN---F-KRCYV 549 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~---~-~r~~~ 549 (824)
..+..||+.++++..+.....+ ...-.+++.. ++.|++... ..+++||+.+++|......+ . ...-.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 498 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNE-LLDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVR 498 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTC-CCCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEE
T ss_pred CCEEEEcCCCCcEEEeccCCCC-CCeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeE
Confidence 4688999999998875432111 1222333333 567776432 45899999999987665332 1 11112
Q ss_pred EEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecC---CCcccCceEEEE-ECCEEEEEcccCCCCcCCce-EEE
Q psy17309 550 STAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP---MNVERSDASATT-LQGKIYITGGFNGHNCLNSC-EVY 623 (824)
Q Consensus 550 ~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~---~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~v-~~y 623 (824)
+++.- +|.|++..- . .-+.+||+.+++++.... ++.... .+++. -+|.|++... .-+ .+|
T Consensus 499 ~i~~d~~g~lWigt~-~-----~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------~Glv~~~ 564 (781)
T 3v9f_A 499 SIAQDSEGRFWIGTF-G-----GGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------EGLVCFP 564 (781)
T ss_dssp EEEECTTCCEEEEES-S-----SCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-------TEEEEES
T ss_pred EEEEcCCCCEEEEEc-C-----CCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-------CCceEEE
Confidence 22222 567777431 1 248899999999887653 222111 11211 2577887532 235 889
Q ss_pred eCCCCeEEEcC---CCCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCCEEECC---CCCCCCcceEEEEE-
Q psy17309 624 DPECNQWTLIE---PMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP---DMYNPRSNFAIEVI- 695 (824)
Q Consensus 624 d~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~- 695 (824)
|+.+++++... .+|.... .+++.- +|.||+.+. +.+.+||+++.+++... .++.......++..
T Consensus 565 d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~ 636 (781)
T 3v9f_A 565 SARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKD 636 (781)
T ss_dssp CTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEEC
T ss_pred CCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------CceEEEECCCCceEEecccCCccccccccCceEEC
Confidence 99988877664 3444333 233333 588888753 45889999998887763 34443333333333
Q ss_pred -CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 696 -DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 696 -~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
+|+||+ ||.+ -+..|||+.
T Consensus 637 ~~G~l~~-g~~~------Gl~~f~p~~ 656 (781)
T 3v9f_A 637 HNGLIYF-GSIN------GLCFFNPDI 656 (781)
T ss_dssp TTSCEEE-EETT------EEEEECSCC
T ss_pred CCCEEEE-ECCC------ceEEEChhh
Confidence 566655 5543 356778764
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.47 E-value=3 Score=51.99 Aligned_cols=139 Identities=8% Similarity=0.012 Sum_probs=75.4
Q ss_pred cEEEEEccCCCCCCCcceEEEECCCCcEEeeccCCCCCCcCeEEEEEE-CCEEEEEccCCCCcccceEEEEEccCCceeE
Q psy17309 46 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 124 (824)
Q Consensus 46 ~~i~~~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~p~~R~~h~~~~~-~~~~yv~GG~~~~~~~~~~~~~~~~~~~W~~ 124 (824)
+.+++.||.+ ..|.+||..+.+-...-. + ....-.+++.. +++..+.||.++ .+.++|+.+.+-..
T Consensus 627 ~~~l~s~~~d-----~~i~vw~~~~~~~~~~~~-~--h~~~v~~~~~s~~~~~l~s~~~d~-----~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 627 GQRIASCGAD-----KTLQVFKAETGEKLLDIK-A--HEDEVLCCAFSSDDSYIATCSADK-----KVKIWDSATGKLVH 693 (1249)
T ss_dssp SSEEEEEETT-----SCEEEEETTTCCEEEEEC-C--CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEEE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCCEEEEec-c--CCCCEEEEEEecCCCEEEEEeCCC-----eEEEEECCCCceEE
Confidence 4456666633 358999998876433211 1 11222333333 566777787543 48889998876433
Q ss_pred ecccCCCcceeEEEEE----CCEEEEEcCcCCCCCCCcEEEEECCCCeEEEecc-cc----ceeeccCCeEEEEcccCCc
Q psy17309 125 IAPMNFKRCYVSTAVH----QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP-MN----CMIQNVTYNIYVIGGFDGN 195 (824)
Q Consensus 125 ~~~~~~~R~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~~----~~~~~~~~~i~v~GG~~~~ 195 (824)
. .........++.+ ++.+++.|+.++ .+..||+.+.+-...-. .. +.....+++.++.|+.++
T Consensus 694 ~--~~~~~~~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg- 765 (1249)
T 3sfz_A 694 T--YDEHSEQVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG- 765 (1249)
T ss_dssp E--EECCSSCEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS-
T ss_pred E--EcCCCCcEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC-
Confidence 2 2222223333333 335666676553 68889988876433211 11 112234567777777664
Q ss_pred eeeceEEEEECCCC
Q psy17309 196 EYYNSCRCFNAVTK 209 (824)
Q Consensus 196 ~~~~~~~~~~~~~~ 209 (824)
.+.++|..+.
T Consensus 766 ----~v~vwd~~~~ 775 (1249)
T 3sfz_A 766 ----TLRLWDVRSA 775 (1249)
T ss_dssp ----EEEEEEGGGT
T ss_pred ----eEEEEeCCCC
Confidence 3566666554
No 88
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.47 E-value=0.57 Score=54.24 Aligned_cols=119 Identities=13% Similarity=0.213 Sum_probs=74.1
Q ss_pred EEEECCEEEEEeecCCCcccceEEEEECCCCc--eEEeccCCCC--------cceEEEEEECCEEEEEecccCCCCCCeE
Q psy17309 504 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK--------RCYVSTAVHQDVIYAMGGYNGQRRQNSV 573 (824)
Q Consensus 504 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 573 (824)
-++.++.||+... ...++++|..+++ |+.-...+.. ....+.++.++.||+... ...+
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 3557999999865 2569999998876 8865433211 112245667889988643 2579
Q ss_pred EEEeCCCCc--EEeecC-C-Cc-ccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCe--EEEcC
Q psy17309 574 EKYNYTENQ--WSLIAP-M-NV-ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIE 634 (824)
Q Consensus 574 ~~yd~~t~~--W~~~~~-~-p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 634 (824)
..+|..|.+ |+.-.. - +. .....+.++.++.+|+..+.........+..||..+++ |+.-.
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 999998765 876432 1 11 11222334568888875442221234679999998875 87643
No 89
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.46 E-value=0.19 Score=51.84 Aligned_cols=228 Identities=11% Similarity=0.054 Sum_probs=119.5
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEE-cccCC-CCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCce
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVK-IDQVD-PMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 536 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~-~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 536 (824)
+.+++.|+ ...+..||..+..... +.... ......-.+++.. ++..++.|+.+ ..+..||..+.+.
T Consensus 63 ~~~l~~~~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 63 TRHVYTGG------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-----STLSIWDLAAPTP 131 (337)
T ss_dssp SSEEEEEC------BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-----SEEEEEECCCC--
T ss_pred CcEEEEcC------CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCCc
Confidence 34555554 1467888877654211 00000 0111222233333 55666677643 4689999998875
Q ss_pred EEeccCCCCcce-EEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccC
Q psy17309 537 KEIAPMNFKRCY-VSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFN 612 (824)
Q Consensus 537 ~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~ 612 (824)
.....+...... .+++.. ++..++.|+.+ ..+..||..+.+.... +...........+ ++..++.|+.+
T Consensus 132 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 132 RIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQ--FQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceeee--eecccCceEEEEECCCCCEEEEEecC
Confidence 444333222222 223332 56677777643 4588999988764332 1111112222222 56667777654
Q ss_pred CCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceE
Q psy17309 613 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA 691 (824)
Q Consensus 613 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 691 (824)
..+..||..+.+-...-..+. ...+++.. +++.+++|+.+ ..+..||..+.+-..+... .....
T Consensus 205 -----g~i~~~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~-----~~i~~~~~~~~~~~~~~~~---~~~v~ 269 (337)
T 1gxr_A 205 -----NTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMES-----SNVEVLHVNKPDKYQLHLH---ESCVL 269 (337)
T ss_dssp -----SEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETT-----SCEEEEETTSSCEEEECCC---SSCEE
T ss_pred -----CcEEEEECCCCceEeeecCCC--ceEEEEECCCCCEEEEEcCC-----CcEEEEECCCCCeEEEcCC---cccee
Confidence 468899988776433322221 12222222 57777777753 4688999887654333221 11122
Q ss_pred EEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEE
Q psy17309 692 IEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 725 (824)
Q Consensus 692 ~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (824)
.+.+ ++++++.|+.++ .+.+||..+.+-.
T Consensus 270 ~~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 270 SLKFAYCGKWFVSTGKDN-----LLNAWRTPYGASI 300 (337)
T ss_dssp EEEECTTSSEEEEEETTS-----EEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEecCCC-----cEEEEECCCCeEE
Confidence 2223 577778887654 6888998876543
No 90
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.41 E-value=0.63 Score=50.72 Aligned_cols=216 Identities=9% Similarity=0.132 Sum_probs=113.3
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 554 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 554 (824)
..+..||..+.+-... .. .....-.+++...+.+++.|+.+ ..+..||..+++-...-.... ..-.+++..
T Consensus 142 g~i~vwd~~~~~~~~~--~~-~h~~~V~~l~~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~h~-~~v~~l~~~ 212 (464)
T 3v7d_B 142 KMIRVYDSINKKFLLQ--LS-GHDGGVWALKYAHGGILVSGSTD-----RTVRVWDIKKGCCTHVFEGHN-STVRCLDIV 212 (464)
T ss_dssp SCEEEEETTTTEEEEE--EC-CCSSCEEEEEECSTTEEEEEETT-----SCEEEEETTTTEEEEEECCCS-SCEEEEEEE
T ss_pred CcEEEEECCCCcEEEE--Ee-CCCcCEEEEEEcCCCEEEEEeCC-----CCEEEEECCCCcEEEEECCCC-CccEEEEEe
Confidence 4588899887764331 11 11122233333433367777754 458889998875332211111 111223332
Q ss_pred ---CCEEEEEecccCCCCCCeEEEEeCCCCcEEee---------------------cCCCcccCceEEEEECCEEEEEcc
Q psy17309 555 ---QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI---------------------APMNVERSDASATTLQGKIYITGG 610 (824)
Q Consensus 555 ---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~---------------------~~~p~~r~~~~~~~~~~~lyv~GG 610 (824)
++..++.|+.+ ..+..||..+..-... ..+........+...++.+++.|+
T Consensus 213 ~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 287 (464)
T 3v7d_B 213 EYKNIKYIVTGSRD-----NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 287 (464)
T ss_dssp ESSSCEEEEEEETT-----SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEE
T ss_pred cCCCCCEEEEEcCC-----CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEe
Confidence 45777777754 3567777766542110 000111111222233556666776
Q ss_pred cCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCc
Q psy17309 611 FNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRS 688 (824)
Q Consensus 611 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 688 (824)
.+ ..+..||..+.+-... +.........+.+ ++..++.|+.+ ..+.+||..+.+-.. .+.....
T Consensus 288 ~d-----~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~--~~~~h~~ 353 (464)
T 3v7d_B 288 YD-----NTLIVWDVAQMKCLYI--LSGHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGELMY--TLQGHTA 353 (464)
T ss_dssp TT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEE--EECCCSS
T ss_pred CC-----CeEEEEECCCCcEEEE--ecCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEEE--EEeCCCC
Confidence 55 4688999887654322 1111222222222 56677777754 468899987764222 2222233
Q ss_pred ceEEEEECCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 689 NFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 689 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
....+.+++..++.|+.++ .+.+||+.+..
T Consensus 354 ~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~ 383 (464)
T 3v7d_B 354 LVGLLRLSDKFLVSAAADG-----SIRGWDANDYS 383 (464)
T ss_dssp CEEEEEECSSEEEEEETTS-----EEEEEETTTCC
T ss_pred cEEEEEEcCCEEEEEeCCC-----cEEEEECCCCc
Confidence 3445556778888888765 68899988754
No 91
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.40 E-value=0.078 Score=55.90 Aligned_cols=192 Identities=9% Similarity=0.110 Sum_probs=103.0
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce-EEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
++.++++|+.+ ..+..||..+++|..+..+...... .+++.. ++..++.|+.+ ..+.+||..+.++..
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 45566666543 5688999999877666555432222 233333 56777777743 458889998888765
Q ss_pred ecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCe-EEEcCCCCCC-CcceEEEEE--CCEEEEEecCC
Q psy17309 586 IAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRHR-RSGVSCIAY--HECIYVIGGFN 659 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~ 659 (824)
...+.........+.+ +++.++.|+.+ ..+..||..+.. |........+ ......+.+ ++..++.|+.+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 5433222222223333 56677777754 356677765543 3332222111 122223333 57777777754
Q ss_pred CCCccceEEEEeCCCCC---------E-------EECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 660 GMSRMCNGEKYNPVTKT---------W-------SQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~~---------W-------~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
..+..||..... | ..+..+.........+.+ +++.++.|+.++ .+.+||..+
T Consensus 164 -----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~ 233 (372)
T 1k8k_C 164 -----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS-----TVCLADADK 233 (372)
T ss_dssp -----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT-----EEEEEEGGG
T ss_pred -----CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC-----EEEEEECCC
Confidence 467788854211 1 111111111111222333 666777777654 588888876
Q ss_pred CcE
Q psy17309 722 DEW 724 (824)
Q Consensus 722 ~~W 724 (824)
.+-
T Consensus 234 ~~~ 236 (372)
T 1k8k_C 234 KMA 236 (372)
T ss_dssp TTE
T ss_pred Cce
Confidence 543
No 92
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.39 E-value=0.72 Score=48.33 Aligned_cols=249 Identities=8% Similarity=0.025 Sum_probs=116.4
Q ss_pred CEEEEEccCCCCCC-CceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCce
Q psy17309 460 EILFAIGGWSGGSP-TDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 536 (824)
Q Consensus 460 ~~l~~~GG~~~~~~-~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 536 (824)
...+.+|.+..+.. .-.++.+|+.+.++..+.......|+ .++.. +..||+.+........-.+|.+|..+++.
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~---~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPS---YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCC---SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCc---eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 45667787655332 22356678888887765332111121 12333 44576665432111122345666666777
Q ss_pred EEeccCCCC-cceEEEEEECC-EEEEEecccCCCCCCeEEEEeCCCCc-EEee-------cCCCcc-----cCceEEEEE
Q psy17309 537 KEIAPMNFK-RCYVSTAVHQD-VIYAMGGYNGQRRQNSVEKYNYTENQ-WSLI-------APMNVE-----RSDASATTL 601 (824)
Q Consensus 537 ~~~~~~~~~-r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~-W~~~-------~~~p~~-----r~~~~~~~~ 601 (824)
..+...+.. ..-..++. ++ .||+.+.. ...+.+|+..++. ...+ ..-|.+ ...|+++..
T Consensus 90 ~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~-----~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT-NGKNIVTANYS-----GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp EEEEEEECSSSCEEEEEE-CSSEEEEEETT-----TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred EEeeEeccCCCCcEEEEE-CCCEEEEEECC-----CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 766654422 22233334 55 46665431 2567888876432 1111 101110 011334433
Q ss_pred -CC-EEEEEcccCCCCcCCceEEEeCCCCe-------EEEc-----CCCCCCCcceEEEEE-CC-EEEEEecCCCCCccc
Q psy17309 602 -QG-KIYITGGFNGHNCLNSCEVYDPECNQ-------WTLI-----EPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMC 665 (824)
Q Consensus 602 -~~-~lyv~GG~~~~~~~~~v~~yd~~~~~-------W~~~-----~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~ 665 (824)
++ .||+.+.. .+.+.+|+..... .... ...+.......++.. ++ .+|+.+.. .+
T Consensus 164 pdg~~l~~~~~~-----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~ 233 (361)
T 3scy_A 164 PDGKYLLADDLG-----TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----GG 233 (361)
T ss_dssp TTSSEEEEEETT-----TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----TC
T ss_pred CCCCEEEEEeCC-----CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----CC
Confidence 45 47776432 2457777655433 2111 111222111222322 45 47776632 25
Q ss_pred eEEEEeCCCCCEEECC---CCCCCCcceEEEEE--CCE-EEEEccCCCCceeeEEEEEEC--CCCcEEeccCCC
Q psy17309 666 NGEKYNPVTKTWSQVP---DMYNPRSNFAIEVI--DDM-IFAIGGFNGVTTIYHVECYDE--KTDEWYEATDMN 731 (824)
Q Consensus 666 ~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~p 731 (824)
.+.+||..+.+.+.+. ..+........+.+ +++ ||+.+.... +.+.+|+. .+.+++.+..++
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~----~~i~v~~~~~~~g~~~~~~~~~ 303 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA----DGVAIFKVDETNGTLTKVGYQL 303 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS----CEEEEEEECTTTCCEEEEEEEE
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC----CEEEEEEEcCCCCcEEEeeEec
Confidence 6888888777665543 22322222333334 554 555542201 24555554 567777665444
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.39 E-value=0.21 Score=53.55 Aligned_cols=226 Identities=12% Similarity=0.144 Sum_probs=114.8
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCce--E
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVW--K 537 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W--~ 537 (824)
+..+++|+.. ..+..||..+.+.... .. ...........++.+++.|+.+ ..+..||..+..- .
T Consensus 146 ~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~--~~~~~v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~ 211 (401)
T 4aez_A 146 GSFLSVGLGN-----GLVDIYDVESQTKLRT--MA--GHQARVGCLSWNRHVLSSGSRS-----GAIHHHDVRIANHQIG 211 (401)
T ss_dssp SSEEEEEETT-----SCEEEEETTTCCEEEE--EC--CCSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred CCEEEEECCC-----CeEEEEECcCCeEEEE--ec--CCCCceEEEEECCCEEEEEcCC-----CCEEEEecccCcceee
Confidence 3455555532 3588899887765432 11 1111222233355677777654 4688899874332 1
Q ss_pred EeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEe-ecCCCcccCceEEEEE--CCEEEEEcccCC
Q psy17309 538 EIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSL-IAPMNVERSDASATTL--QGKIYITGGFNG 613 (824)
Q Consensus 538 ~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~~ 613 (824)
.+... ...-.+++.. ++..++.|+.+ ..+.+||..+..-.. +.... ..-.+++.. ++.+++.||..
T Consensus 212 ~~~~~--~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~p~~~~ll~~~~gs- 281 (401)
T 4aez_A 212 TLQGH--SSEVCGLAWRSDGLQLASGGND-----NVVQIWDARSSIPKFTKTNHN--AAVKAVAWCPWQSNLLATGGGT- 281 (401)
T ss_dssp EEECC--SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTCSSEEEEECCCS--SCCCEEEECTTSTTEEEEECCT-
T ss_pred EEcCC--CCCeeEEEEcCCCCEEEEEeCC-----CeEEEccCCCCCccEEecCCc--ceEEEEEECCCCCCEEEEecCC-
Confidence 22111 1111222222 66777888754 468889988754322 21111 111223333 45677776411
Q ss_pred CCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCE-EEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcce
Q psy17309 614 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HEC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF 690 (824)
Q Consensus 614 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 690 (824)
....+..||..+.+-...-.. .. ....+.+ +++ +++.+|.. ...+.+||..+........++......
T Consensus 282 --~d~~i~i~d~~~~~~~~~~~~--~~-~v~~~~~s~~~~~l~~~~g~~----dg~i~v~~~~~~~~~~~~~~~~h~~~v 352 (401)
T 4aez_A 282 --MDKQIHFWNAATGARVNTVDA--GS-QVTSLIWSPHSKEIMSTHGFP----DNNLSIWSYSSSGLTKQVDIPAHDTRV 352 (401)
T ss_dssp --TTCEEEEEETTTCCEEEEEEC--SS-CEEEEEECSSSSEEEEEECTT----TCEEEEEEEETTEEEEEEEEECCSSCC
T ss_pred --CCCEEEEEECCCCCEEEEEeC--CC-cEEEEEECCCCCeEEEEeecC----CCcEEEEecCCccceeEEEecCCCCCE
Confidence 124688999887654332211 11 1222333 444 44443432 246888888877666553332222222
Q ss_pred EEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 691 AIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 691 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
..+.+ +++.++.||.++ .+.+||..+.+
T Consensus 353 ~~~~~s~dg~~l~s~~~dg-----~i~iw~~~~~~ 382 (401)
T 4aez_A 353 LYSALSPDGRILSTAASDE-----NLKFWRVYDGD 382 (401)
T ss_dssp CEEEECTTSSEEEEECTTS-----EEEEEECCC--
T ss_pred EEEEECCCCCEEEEEeCCC-----cEEEEECCCCc
Confidence 22222 677888888765 68888887754
No 94
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.38 E-value=1.1 Score=46.25 Aligned_cols=197 Identities=7% Similarity=-0.012 Sum_probs=102.3
Q ss_pred CCEEEEEeecCC-CcccceEEEEECCCCceEEeccCCCCcceEEEEEE-C-CEEEEEecccCCCCCCeEEEEeCCCCcEE
Q psy17309 508 GYNIYVIGGFDG-NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-Q-DVIYAMGGYNGQRRQNSVEKYNYTENQWS 584 (824)
Q Consensus 508 ~~~lyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 584 (824)
++.+|+...... ......++.+|+.+.+-...-+... ..+.++.. + +.+|+.++. .+.+.++|+.+.+-.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~ 124 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTV-----NSAVTAIDAKTGEVK 124 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETT-----TTEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecC-----CCEEEEEeCCCCeeE
Confidence 457777663211 1124679999999887543322221 12223333 3 458887653 257999999887743
Q ss_pred eecCCCccc--------CceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-C-CEE
Q psy17309 585 LIAPMNVER--------SDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-H-ECI 652 (824)
Q Consensus 585 ~~~~~p~~r--------~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~i 652 (824)
..-+.+... ..++++.. ++.+|+.+... ...+..||+.+.+-...-+... ......+.. + +.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTG-KMSTGLALDSEGKRL 199 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCCC-TTCCCCEEETTTTEE
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCCC-CccceEEECCCCCEE
Confidence 322221111 12333333 45677776322 2468999998876433322111 111222222 4 456
Q ss_pred EEEecCCCCCccceEEEEeCCCCCEEECCCC--CCCCcce-EEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 653 YVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM--YNPRSNF-AIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 653 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~~r~~~-~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
|+... ...+.++|+.+.+-...-.. ..+.... +++.. ++.+|+.+..+ ..+.+||+.+.+....
T Consensus 200 ~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 200 YTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA-----AEVLVVDTRNGNILAK 268 (353)
T ss_dssp EEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS-----SEEEEEETTTCCEEEE
T ss_pred EEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEE
Confidence 66543 25788999987753322111 1112222 23333 45677765322 3789999988776544
No 95
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.38 E-value=0.59 Score=52.80 Aligned_cols=119 Identities=13% Similarity=0.167 Sum_probs=72.2
Q ss_pred EEEECCEEEEEeecCCCcccceEEEEEC-CCCc--eEEeccCCCC--------cceEEEEEECCEEEEEecccCCCCCCe
Q psy17309 504 TAVIGYNIYVIGGFDGNEYYNSCRCFNA-VTKV--WKEIAPMNFK--------RCYVSTAVHQDVIYAMGGYNGQRRQNS 572 (824)
Q Consensus 504 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 572 (824)
-++.++.||+.... ...++++|. .+++ |+.-...+.. ....+.++.+++||+... ...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCE
Confidence 45669999998652 246999999 7766 8864432211 112235667899998743 257
Q ss_pred EEEEeCCCCc--EEeecCC-Ccc-cCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCe--EEEc
Q psy17309 573 VEKYNYTENQ--WSLIAPM-NVE-RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLI 633 (824)
Q Consensus 573 ~~~yd~~t~~--W~~~~~~-p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 633 (824)
++.+|..+.+ |+.-..- +.. ....+-++.++++|+..+.........+..||+++++ |+.-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 9999998874 8753221 111 1122234568998875432111123578999998765 8754
No 96
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.37 E-value=0.28 Score=50.87 Aligned_cols=210 Identities=11% Similarity=0.106 Sum_probs=108.4
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..+..+|..+.+-...-... +....+++.. ++..++.|+.+ ..+..||..+.+-...-... ...-.+++.
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~~~~~-~~~v~~~~~ 172 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG---PVDAWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYSLDTR-GKFILSIAY 172 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC---TTCCCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEEEECS-SSCEEEEEE
T ss_pred CcEEEEECCCCCEEEEEeCC---CccEEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEEecCC-CceEEEEEE
Confidence 46778888776543311111 1111122222 55666777643 45788888776533211111 111122222
Q ss_pred -ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCc-eEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeE
Q psy17309 554 -HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSD-ASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQW 630 (824)
Q Consensus 554 -~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 630 (824)
-+++.++.|+.+ ..+..||..+.+-... +...... .+++.. ++++++.|+.+ ..+..||..+...
T Consensus 173 spdg~~lasg~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~d-----g~i~iwd~~~~~~ 240 (321)
T 3ow8_A 173 SPDGKYLASGAID-----GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDD-----GYIKIYDVQHANL 240 (321)
T ss_dssp CTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTT-----SCEEEEETTTCCE
T ss_pred CCCCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCC-----CeEEEEECCCcce
Confidence 266777777754 4588899988753221 2111111 122222 67777888765 3588899877654
Q ss_pred EEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCC
Q psy17309 631 TLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFN 706 (824)
Q Consensus 631 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 706 (824)
... +.........+.+ ++..++.|+.+ ..+.+||..+.+-.. .+.........+.+ +++.++.||.+
T Consensus 241 ~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~--~~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 241 AGT--LSGHASWVLNVAFCPDDTHFVSSSSD-----KSVKVWDVGTRTCVH--TFFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCEEEE--EEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 322 2222222223333 57777778764 468889987654322 11111122222333 56777888876
Q ss_pred CCceeeEEEEEEC
Q psy17309 707 GVTTIYHVECYDE 719 (824)
Q Consensus 707 ~~~~~~~v~~yd~ 719 (824)
+ .+.+||.
T Consensus 312 ~-----~i~vwd~ 319 (321)
T 3ow8_A 312 Q-----EIHIYDC 319 (321)
T ss_dssp C-----CEEEEEC
T ss_pred C-----eEEEEeC
Confidence 5 4666763
No 97
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.36 E-value=0.24 Score=51.95 Aligned_cols=180 Identities=14% Similarity=0.204 Sum_probs=96.6
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
+.+++.||.+ ..+..||..+++|.............-.+++.. ++..++.|+.++ .+..||..+..+..
T Consensus 28 g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 28 GTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQDDFEC 97 (345)
T ss_dssp SSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECCC-EEE
T ss_pred CCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccCCCeEE
Confidence 3455566532 357788888887753211111112222233333 567777787653 47778877777665
Q ss_pred eccCCCCcceE-EEEEE-CCEEEEEecccCCCCCCeEEEEeCCCC-cEEeecCCCcccCceEEEEE--CCEEEEEcccCC
Q psy17309 539 IAPMNFKRCYV-STAVH-QDVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERSDASATTL--QGKIYITGGFNG 613 (824)
Q Consensus 539 ~~~~~~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~ 613 (824)
+..+....... +++.. ++.+++.|+.+ ..+..+|..+. .+..+..+.........+.. ++.+++.|+.+
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d- 171 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD- 171 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT-
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC-
Confidence 54443222222 22322 56777778754 45777887654 33333222222222222222 56777777765
Q ss_pred CCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCC
Q psy17309 614 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 659 (824)
Q Consensus 614 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 659 (824)
..+..||..++.|.....+.........+.+ +++.++.|+.+
T Consensus 172 ----~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 172 ----DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp ----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ----CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 3678899888888765444333333333333 57777778765
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.36 E-value=0.065 Score=56.81 Aligned_cols=239 Identities=11% Similarity=0.094 Sum_probs=113.0
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCC-ceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCc-e
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPR-AYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV-W 536 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r-~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W 536 (824)
+.+++.|+.. ..+..||..+..|..+. ...... .-.+++.. ++..++.|+.+ ..+..||..++. |
T Consensus 23 g~~l~~~~~d-----~~i~iw~~~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 23 RTEFVTTTAT-----NQVELYEQDGNGWKHAR--TFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTW 90 (377)
T ss_dssp SSEEECCCSS-----SCBCEEEEETTEEEECC--CBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CC
T ss_pred CCEEEEecCC-----CEEEEEEccCCceEEEE--EEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCce
Confidence 4456666532 35677888888776632 222112 22233333 56777777754 358888988876 5
Q ss_pred EEeccCCCCcce-EEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCc-EEeecCCCc-ccCce-EEEEE-CCEEEEEcc
Q psy17309 537 KEIAPMNFKRCY-VSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIAPMNV-ERSDA-SATTL-QGKIYITGG 610 (824)
Q Consensus 537 ~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~~~~~~p~-~r~~~-~~~~~-~~~lyv~GG 610 (824)
.....+...... .+++.. ++..++.|+.+ ..+..||..+.+ |.....+.. ..... +++.. ++++++.|+
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 443333222222 222222 56677777754 357788887764 433333322 12222 22222 567777777
Q ss_pred cCCCCcCCceEEEeCCCCe----------------EEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeC
Q psy17309 611 FNGHNCLNSCEVYDPECNQ----------------WTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNP 672 (824)
Q Consensus 611 ~~~~~~~~~v~~yd~~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~ 672 (824)
.+ ..+..||..+.. -..+..+ .......++.+ ++++++.|+.+ ..+.+||.
T Consensus 166 ~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~iwd~ 234 (377)
T 3dwl_C 166 AD-----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHD-----SSVTIAYP 234 (377)
T ss_dssp SS-----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETT-----TEEC-CEE
T ss_pred CC-----CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCC-----CcEEEEEC
Confidence 65 357788875332 2222222 11222233333 67777777754 35777777
Q ss_pred CCCCE--EECCCCCCCCcceEE--EEECCEEEEEccCCCCceeeEEEEEECCCCcEEeccCCCC
Q psy17309 673 VTKTW--SQVPDMYNPRSNFAI--EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNI 732 (824)
Q Consensus 673 ~~~~W--~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 732 (824)
.+.+- ..+..+......... ..-++++++.|+.+ .+.+|+.....|.....+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 3dwl_C 235 SAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNY------SPILLQGNESGWAHTRDLDA 292 (377)
T ss_dssp CSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSS------SEEEECCCC---CCSBCCCS
T ss_pred CCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCC------cEEEEEeCCCceEEEeeecc
Confidence 66542 223222222221222 22378888777533 24578877777877655443
No 99
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.35 E-value=0.24 Score=51.50 Aligned_cols=236 Identities=14% Similarity=0.204 Sum_probs=117.1
Q ss_pred EEEEccCCCCCCCceEEEEECCCCcEEEcccCCCC-CCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCC-----
Q psy17309 462 LFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPM-GPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTK----- 534 (824)
Q Consensus 462 l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~----- 534 (824)
+++.|+.+ ..+..||..++.+..+...... ....-.+++.. ++.+++.|+.+ ..+..||....
T Consensus 26 ~las~~~D-----~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D-----~~v~iw~~~~~~~~~~ 95 (330)
T 2hes_X 26 ILATGSTD-----RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD-----STVSIWAKEESADRTF 95 (330)
T ss_dssp EEEEEESS-----SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT-----SCEEEEEC-------C
T ss_pred EEEEEcCC-----CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC-----CcEEEEEcccCcCccc
Confidence 55555532 3577888876543322111111 11222233333 56777788755 34777777432
Q ss_pred ceEEeccCCCCcceE-EEEEE-CCEEEEEecccCCCCCCeEEEEeCCC--CcEEeecCCCcccCceEEEEE--CCEEEEE
Q psy17309 535 VWKEIAPMNFKRCYV-STAVH-QDVIYAMGGYNGQRRQNSVEKYNYTE--NQWSLIAPMNVERSDASATTL--QGKIYIT 608 (824)
Q Consensus 535 ~W~~~~~~~~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t--~~W~~~~~~p~~r~~~~~~~~--~~~lyv~ 608 (824)
.+..+..+....... +++.. ++..++.|+.+ ..+.++|... ..++.+..+.........+.. ++.+++.
T Consensus 96 ~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 170 (330)
T 2hes_X 96 EMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLAS 170 (330)
T ss_dssp CCEEEEEEC----CEEEEEECTTSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred cceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEE
Confidence 233322222111111 22222 56777777754 4577888743 334443333322222223333 5677778
Q ss_pred cccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--C--CEEEEEecCCCCCccceEEEEeCCC------CCEE
Q psy17309 609 GGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H--ECIYVIGGFNGMSRMCNGEKYNPVT------KTWS 678 (824)
Q Consensus 609 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~------~~W~ 678 (824)
|+.+ ..+..||..+..|..+..+.........+.+ + +..++.|+.++ .+.+||... ..|.
T Consensus 171 ~s~D-----~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 171 SSYD-----DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp EETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEE
T ss_pred EcCC-----CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeE
Confidence 8765 3577888877777766544332222223333 2 34566676543 455555432 2455
Q ss_pred ECCCCCC--CCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 679 QVPDMYN--PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 679 ~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
....++. ...-.+++...+.+++.||.++ .+.+||..+..|..+
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg-----~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNGLIASVGADG-----VLAVYEEVDGEWKVF 286 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTSCEEEEETTS-----CEEEEEEETTEEEEE
T ss_pred EeeecccccccceEEEEEcCCCEEEEEeCCC-----EEEEEEcCCCceEEE
Confidence 4443332 1222233333455677777665 577888888888655
No 100
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.34 E-value=0.26 Score=50.53 Aligned_cols=185 Identities=8% Similarity=0.138 Sum_probs=100.4
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++..++.|+.+ ..+..||..+.+....-.... ..-.+++.. ++.+++.|+.+ ..+.+||..+.+-...
T Consensus 34 ~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~ 102 (312)
T 4ery_A 34 NGEWLASSSAD-----KLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLKT 102 (312)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEE
T ss_pred CCCEEEEeeCC-----CeEEEEeCCCcccchhhccCC-CceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEEE
Confidence 45566667654 347888888777654322111 111223322 56777777753 4688899887653221
Q ss_pred cCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCC
Q psy17309 587 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 662 (824)
Q Consensus 587 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 662 (824)
+.........+.+ ++.+++.|+.+ ..+..||..+.+-... ++........+.+ ++.+++.|+.+
T Consensus 103 --~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d--- 170 (312)
T 4ery_A 103 --LKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD--- 170 (312)
T ss_dssp --EECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT---
T ss_pred --EcCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC---
Confidence 1111111122222 56677777765 3688899887653222 2222222233333 57777888764
Q ss_pred ccceEEEEeCCCCCEEEC-CCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 663 RMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
..+..||..+.+-... .....+ ....+.+ +++.++.|+.++ .+.+||..+.+-
T Consensus 171 --~~i~~wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~ 226 (312)
T 4ery_A 171 --GLCRIWDTASGQCLKTLIDDDNP--PVSFVKFSPNGKYILAATLDN-----TLKLWDYSKGKC 226 (312)
T ss_dssp --SCEEEEETTTCCEEEEECCSSCC--CEEEEEECTTSSEEEEEETTT-----EEEEEETTTTEE
T ss_pred --CcEEEEECCCCceeeEEeccCCC--ceEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcE
Confidence 4688999887654322 111111 1122222 677777777654 688899887653
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.33 E-value=0.39 Score=51.38 Aligned_cols=221 Identities=9% Similarity=0.073 Sum_probs=114.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..+..||..+.+........ ....-.+++.. ++..+++|+.+ ..+..||..+++-...-. ........+.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~ 183 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD--ESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMA--GHQARVGCLS 183 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC--TTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEEC--CCSSCEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecC--CCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEec--CCCCceEEEE
Confidence 46889999888776532221 12222333333 56677777654 358899988876433221 1122223333
Q ss_pred ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEE
Q psy17309 554 HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT 631 (824)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 631 (824)
.++.+++.|+.+ ..+..||..+..-. +..+............ ++.+++.|+.+ ..+..||..+.+-.
T Consensus 184 ~~~~~l~~~~~d-----g~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 184 WNRHVLSSGSRS-----GAIHHHDVRIANHQ-IGTLQGHSSEVCGLAWRSDGLQLASGGND-----NVVQIWDARSSIPK 252 (401)
T ss_dssp EETTEEEEEETT-----SEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTCSSEE
T ss_pred ECCCEEEEEcCC-----CCEEEEecccCcce-eeEEcCCCCCeeEEEEcCCCCEEEEEeCC-----CeEEEccCCCCCcc
Confidence 466777777743 56888888743211 1111111112222222 66777788765 46889998875432
Q ss_pred E-cCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCE-EEEEcc-
Q psy17309 632 L-IEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDM-IFAIGG- 704 (824)
Q Consensus 632 ~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG- 704 (824)
. +..... .-.+++.. +..+++.||.. ....+..||..+.+-...-. ... ....+.+ +++ +++.+|
T Consensus 253 ~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs---~d~~i~i~d~~~~~~~~~~~--~~~-~v~~~~~s~~~~~l~~~~g~ 324 (401)
T 4aez_A 253 FTKTNHNA--AVKAVAWCPWQSNLLATGGGT---MDKQIHFWNAATGARVNTVD--AGS-QVTSLIWSPHSKEIMSTHGF 324 (401)
T ss_dssp EEECCCSS--CCCEEEECTTSTTEEEEECCT---TTCEEEEEETTTCCEEEEEE--CSS-CEEEEEECSSSSEEEEEECT
T ss_pred EEecCCcc--eEEEEEECCCCCCEEEEecCC---CCCEEEEEECCCCCEEEEEe--CCC-cEEEEEECCCCCeEEEEeec
Confidence 2 111111 11223333 45677777511 12568899988765433211 111 1222222 444 444434
Q ss_pred CCCCceeeEEEEEECCCCcEEecc
Q psy17309 705 FNGVTTIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~W~~~~ 728 (824)
.++ .+.+||..+.......
T Consensus 325 ~dg-----~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 325 PDN-----NLSIWSYSSSGLTKQV 343 (401)
T ss_dssp TTC-----EEEEEEEETTEEEEEE
T ss_pred CCC-----cEEEEecCCccceeEE
Confidence 333 6888888877666553
No 102
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.30 E-value=0.08 Score=55.65 Aligned_cols=180 Identities=9% Similarity=0.149 Sum_probs=99.9
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCC--CcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF--KRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWS 584 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 584 (824)
++.+++.||.+ ..+..||..+++|.....+.. ...-.+++.. ++..++.|+.+ ..+..+|..+..++
T Consensus 27 ~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-----~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 27 AGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-----ATTCIWKKNQDDFE 96 (345)
T ss_dssp TSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECCC-EE
T ss_pred CCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----CcEEEEEccCCCeE
Confidence 55667777754 357888888887754332211 1112223322 56777778754 34677787777765
Q ss_pred eecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCC-eEEEcCCCCCCCcceEEEEE--CCEEEEEecCC
Q psy17309 585 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 659 (824)
Q Consensus 585 ~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 659 (824)
.+..+.........+.. ++++++.|+.+ ..+..||..+. .+..+..+.........+.. ++.+++.|+.+
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred EEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 55444332222233333 57777888765 35778887654 23333222222222233333 57777777764
Q ss_pred CCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCC
Q psy17309 660 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 707 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 707 (824)
..+..||..+..|..+..+.........+.+ +++.++.|+.++
T Consensus 172 -----~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 172 -----DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp -----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred -----CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 4578888888887654433322222223333 677888888765
No 103
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.24 E-value=0.39 Score=49.18 Aligned_cols=224 Identities=17% Similarity=0.193 Sum_probs=112.4
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceE-
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK- 537 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~- 537 (824)
+..++.|+. ...+..||..+.+-... .... ...-.++... ++..++.|+.+ ..+..||..+++-.
T Consensus 25 ~~~l~s~~~-----dg~v~lWd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 25 EPWVLTTLY-----SGRVELWNYETQVEVRS--IQVT-ETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV 91 (304)
T ss_dssp SSEEEEEET-----TSEEEEEETTTTEEEEE--EECC-SSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCEEEEEcC-----CCcEEEEECCCCceeEE--eecc-CCcEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEE
Confidence 445555653 24688899887754331 1110 1111223333 55667777654 46888998876532
Q ss_pred EeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE---CCEEEEEcccCC
Q psy17309 538 EIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNG 613 (824)
Q Consensus 538 ~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~ 613 (824)
.+..- ...-.+++.. ++.+++.|+.+ ..+..+|..++. .....+........++.+ ++.+++.|+.+
T Consensus 92 ~~~~h--~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D- 162 (304)
T 2ynn_A 92 DFEAH--PDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD- 162 (304)
T ss_dssp EEECC--SSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETT-
T ss_pred EEeCC--CCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCC-
Confidence 12111 1111223332 56677777754 457788876652 111111111111122222 45677788765
Q ss_pred CCcCCceEEEeCCCCe--EEEcCCCCCCCcceEEEEE----CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCC
Q psy17309 614 HNCLNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAY----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 687 (824)
Q Consensus 614 ~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 687 (824)
..+..||..+.. ..... ...+ ....+.+ ++.+++.|+.+ ..+.++|..+.+-. ..+....
T Consensus 163 ----~~v~iwd~~~~~~~~~~~~--~~~~-~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~~--~~~~~h~ 228 (304)
T 2ynn_A 163 ----RTVKVWSLGQSTPNFTLTT--GQER-GVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCV--ATLEGHM 228 (304)
T ss_dssp ----SEEEEEETTCSSCSEEEEC--CCTT-CEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEEE--EEEECCS
T ss_pred ----CeEEEEECCCCCccceecc--CCcC-cEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCccc--eeeCCCC
Confidence 367788876543 11111 1111 1122222 45667777654 46888998765422 1121111
Q ss_pred cceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 688 SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 688 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
.....+.+ ++.+++.|+.++ .+.+||..+.+-
T Consensus 229 ~~v~~~~~~p~~~~l~s~s~Dg-----~i~iWd~~~~~~ 262 (304)
T 2ynn_A 229 SNVSFAVFHPTLPIIISGSEDG-----TLKIWNSSTYKV 262 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCE
T ss_pred CCEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCce
Confidence 22222333 567888888765 578899877543
No 104
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.22 E-value=0.51 Score=50.43 Aligned_cols=194 Identities=9% Similarity=0.025 Sum_probs=98.6
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceE-----EeccCCCC-cceEEEEEE-CC-EEEEEecccCCCCCCeEEEEeCC
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK-----EIAPMNFK-RCYVSTAVH-QD-VIYAMGGYNGQRRQNSVEKYNYT 579 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-----~~~~~~~~-r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~ 579 (824)
++.+++.|+.+ ..+..||..++... .+..+... ..-.+++.. ++ .+++.|+.+ ..+.+||..
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~ 162 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-----NVILVWDVG 162 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-----SCEEEEETT
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-----CEEEEEECC
Confidence 56777888754 45888998876431 11111111 111223333 33 577777754 458899998
Q ss_pred CCcEEeecC-CCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC-CCCCCCcceEEE-EECCEEEEE
Q psy17309 580 ENQWSLIAP-MNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSCI-AYHECIYVI 655 (824)
Q Consensus 580 t~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~-~~~~~iyv~ 655 (824)
+.+....-. ......-.+++.. ++.+++.|+.+ ..+..||+.+.+-...- ..........++ .-++++++.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE
Confidence 876543211 1111112222222 66777777754 46889999887643321 111111112223 236777777
Q ss_pred ecCCCCCccceEEEEeCCCCCE-EECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 656 GGFNGMSRMCNGEKYNPVTKTW-SQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
|.... ....+.+||..+..- .....+........++.. +..|++.|+.++ .+.+||..+.+
T Consensus 238 g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg-----~i~i~d~~~~~ 301 (402)
T 2aq5_A 238 GFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS-----SIRYFEITSEA 301 (402)
T ss_dssp EECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS-----CEEEEEECSST
T ss_pred eccCC--CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC-----eEEEEEecCCC
Confidence 72110 135788999876431 001111111112222222 345666775554 57788887765
No 105
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.21 E-value=1 Score=44.94 Aligned_cols=229 Identities=8% Similarity=-0.055 Sum_probs=121.9
Q ss_pred CCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCC-CceEEeccCCCCcceEE
Q psy17309 473 PTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT-KVWKEIAPMNFKRCYVS 550 (824)
Q Consensus 473 ~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~r~~~~ 550 (824)
....+..+|+.+++...+... ...-.+++.. ++..+++++ ...++.+|..+ ++...+........-..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~----~~~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 89 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT----PELFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGFATICNND 89 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE----SSCCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCCTTCCCBCSC
T ss_pred cceeEEEEeCCCCceeeeccC----CcceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEeccccccccccc
Confidence 345788899988877654221 1122233333 555555554 14799999998 87776654332111112
Q ss_pred EE-EECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CC-EEEEEcccCCCCcCCceEEEeCCC
Q psy17309 551 TA-VHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGFNGHNCLNSCEVYDPEC 627 (824)
Q Consensus 551 ~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~ 627 (824)
++ .-+++.+++++.... ....++.++..+..-..+..... ...++.. ++ .|++.++.++. ..++.+|..+
T Consensus 90 ~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~ 162 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDS 162 (297)
T ss_dssp CEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETTE---EEEEEEETTT
T ss_pred eEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCCc---eEEEEEECCC
Confidence 22 235666666553222 34688999988776555443321 2222222 44 45545544321 3567777877
Q ss_pred CeEEEcCCCCCCCcceEEEEE--CCEEEEEec-CCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEE
Q psy17309 628 NQWTLIEPMRHRRSGVSCIAY--HECIYVIGG-FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAI 702 (824)
Q Consensus 628 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG-~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 702 (824)
.....+...+. ....+.. +++.+++++ .++ ...++.+++.......+.... .....+.+ +++.+++
T Consensus 163 ~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 163 GVETRLTHGEG---RNDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITDSA---YGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp CCEEECCCSSS---CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCCCS---EEEEEEEECTTSSEEEE
T ss_pred CcceEcccCCC---ccccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEecCC---cccCCeEECCCCCEEEE
Confidence 77666544322 1122222 555444443 222 357888887777776664322 11222223 5555555
Q ss_pred ccCCCCc------eeeEEEEEECCCCcEEec
Q psy17309 703 GGFNGVT------TIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 703 GG~~~~~------~~~~v~~yd~~~~~W~~~ 727 (824)
++.+... ....+++||.++.+...+
T Consensus 234 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 234 VSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp EEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred EEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 5443221 235799999988766544
No 106
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.20 E-value=0.17 Score=59.89 Aligned_cols=227 Identities=15% Similarity=0.091 Sum_probs=117.2
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
+..+++|+. ...+..||..+.+....-. . ....-.+++.. ++..+++|+.+ ..+..||..+++...
T Consensus 25 ~~~la~~~~-----~g~v~iwd~~~~~~~~~~~--~-~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 25 EPWVLTTLY-----SGRVEIWNYETQVEVRSIQ--V-TETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV 91 (814)
T ss_dssp SSEEEEEET-----TSEEEEEETTTTEEEEEEE--C-CSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCEEEEEeC-----CCEEEEEECCCCceEEEEe--c-CCCcEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 445666653 2468899988876544211 1 11122233333 56667777653 468999998877543
Q ss_pred eccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCC-cEEeecCCCc-ccCceEEEEE--CCEEEEEcccCC
Q psy17309 539 IAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNV-ERSDASATTL--QGKIYITGGFNG 613 (824)
Q Consensus 539 ~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~~~~~p~-~r~~~~~~~~--~~~lyv~GG~~~ 613 (824)
.-.... ..-.+++.. ++..++.|+.+ ..+.+||..++ ..... +.. ...-.+++.. ++.+++.|+.+
T Consensus 92 ~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~~~d- 162 (814)
T 3mkq_A 92 DFEAHP-DYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALEQT--FEGHEHFVMCVAFNPKDPSTFASGCLD- 162 (814)
T ss_dssp EEECCS-SCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEEEE--EECCSSCEEEEEEETTEEEEEEEEETT-
T ss_pred EEecCC-CCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEEEE--EcCCCCcEEEEEEEcCCCCEEEEEeCC-
Confidence 221111 111223332 55566666643 46888898776 22221 111 1111223333 45677777755
Q ss_pred CCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcce
Q psy17309 614 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF 690 (824)
Q Consensus 614 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 690 (824)
..+..||..+..-...-..........++.. ++..++.|+.+ ..+..||..+.+-... +.......
T Consensus 163 ----g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~--~~~~~~~v 231 (814)
T 3mkq_A 163 ----RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVAT--LEGHMSNV 231 (814)
T ss_dssp ----SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEEEE--EECCSSCE
T ss_pred ----CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEEE--EcCCCCCE
Confidence 3688888765432111111111112222222 67777777754 4688899876643221 11111122
Q ss_pred EEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 691 AIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 691 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
..+.+ ++.+++.|+.++ .+.+||+.+.+-
T Consensus 232 ~~~~~~~~~~~l~~~~~dg-----~v~vwd~~~~~~ 262 (814)
T 3mkq_A 232 SFAVFHPTLPIIISGSEDG-----TLKIWNSSTYKV 262 (814)
T ss_dssp EEEEECSSSSEEEEEETTS-----CEEEEETTTCSE
T ss_pred EEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcE
Confidence 22222 667788887665 577888877543
No 107
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.19 E-value=0.34 Score=49.89 Aligned_cols=213 Identities=12% Similarity=0.060 Sum_probs=109.6
Q ss_pred EEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEe
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 539 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 539 (824)
..++.|+. ...+..||..+.+.......... ...-.+++.. ++..++.|+.+ ..+..||..+.+....
T Consensus 110 ~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~~ 178 (337)
T 1gxr_A 110 CTLIVGGE-----ASTLSIWDLAAPTPRIKAELTSS-APACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQ 178 (337)
T ss_dssp SEEEEEES-----SSEEEEEECCCC--EEEEEEECS-SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE
T ss_pred CEEEEEcC-----CCcEEEEECCCCCcceeeecccC-CCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceeee
Confidence 34555543 24688899888764332111111 1112233333 55667777654 3588999988764332
Q ss_pred ccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcC
Q psy17309 540 APMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCL 617 (824)
Q Consensus 540 ~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~ 617 (824)
-..... .-.+++.. ++..++.|+.+ ..+..||+.+.+-...-..+. .-.+++.. +++.+++|+.+
T Consensus 179 ~~~~~~-~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~----- 245 (337)
T 1gxr_A 179 FQGHTD-GASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMES----- 245 (337)
T ss_dssp ECCCSS-CEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETT-----
T ss_pred eecccC-ceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCC--ceEEEEECCCCCEEEEEcCC-----
Confidence 221111 11223332 56677777643 568899998776433222221 12222322 56677777654
Q ss_pred CceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEE-
Q psy17309 618 NSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV- 694 (824)
Q Consensus 618 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 694 (824)
..+..||..+..-..+... ......+.+ ++++++.|+.+ ..+..||..+.+-..... ....-.+++.
T Consensus 246 ~~i~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~--~~~~v~~~~~s 315 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQLHLH---ESCVLSLKFAYCGKWFVSTGKD-----NLLNAWRTPYGASIFQSK--ESSSVLSCDIS 315 (337)
T ss_dssp SCEEEEETTSSCEEEECCC---SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEE--CSSCEEEEEEC
T ss_pred CcEEEEECCCCCeEEEcCC---ccceeEEEECCCCCEEEEecCC-----CcEEEEECCCCeEEEEec--CCCcEEEEEEC
Confidence 4688899887654333221 122222333 57777777753 468899988765432211 1111122222
Q ss_pred ECCEEEEEccCCC
Q psy17309 695 IDDMIFAIGGFNG 707 (824)
Q Consensus 695 ~~~~i~v~GG~~~ 707 (824)
-+++.++.|+.++
T Consensus 316 ~~~~~l~~~~~dg 328 (337)
T 1gxr_A 316 VDDKYIVTGSGDK 328 (337)
T ss_dssp TTSCEEEEEETTS
T ss_pred CCCCEEEEecCCC
Confidence 2667777777654
No 108
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.18 E-value=0.96 Score=48.33 Aligned_cols=225 Identities=9% Similarity=0.042 Sum_probs=116.1
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCce-E
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVW-K 537 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W-~ 537 (824)
+..++.|+. ...+..||..+.+-...- . .....-.+++.. ++.+++.|+.+ ..+..||..+.+- .
T Consensus 109 ~~~l~~~~~-----dg~i~iwd~~~~~~~~~~--~-~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 109 MRRFILGTT-----EGDIKVLDSNFNLQREID--Q-AHVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSNPR 175 (420)
T ss_dssp SCEEEEEET-----TSCEEEECTTSCEEEEET--T-SSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCCCE
T ss_pred CCEEEEEEC-----CCCEEEEeCCCcceeeec--c-cccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcCce
Confidence 345666653 235788888877654421 1 112222333333 56677777754 4688999887542 1
Q ss_pred EeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee-cCCCcccCce-EEEE--------------
Q psy17309 538 EIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDA-SATT-------------- 600 (824)
Q Consensus 538 ~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~r~~~-~~~~-------------- 600 (824)
.+... ...-.+++.. ++..++.|+.+ ..+..||..+.+-... .......... +++.
T Consensus 176 ~~~~h--~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 176 TLIGH--RATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp EEECC--SSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred EEcCC--CCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 22111 1112233333 56666777754 4588888887653222 1111111111 1111
Q ss_pred --------ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCE-EEEEecCCCCCccceEEE
Q psy17309 601 --------LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HEC-IYVIGGFNGMSRMCNGEK 669 (824)
Q Consensus 601 --------~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~ 669 (824)
-++++++.|+.+ ..+..||..+.+-...-..... ....++.+ ++. +++.|+.+ ..+.+
T Consensus 249 ~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~g~~d-----g~i~v 317 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVS-----GVITVHNVFSKEQTIQLPSKFT-CSCNSLTVDGNNANYIYAGYEN-----GMLAQ 317 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETT-----SCEEEEETTTCCEEEEECCTTS-SCEEEEEECSSCTTEEEEEETT-----SEEEE
T ss_pred cccceEEcCCCCEEEEEcCC-----CeEEEEECCCCceeEEcccccC-CCceeEEEeCCCCCEEEEEeCC-----CeEEE
Confidence 156777777755 3588999887653222111111 12223333 454 77777754 47889
Q ss_pred EeCCCCCE--EECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 670 YNPVTKTW--SQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 670 yd~~~~~W--~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
||..+.+- ..+.. .....-..+...++++++.||.++ .+.+||+.+
T Consensus 318 wd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~l~s~~~d~-----~v~iw~~~~ 365 (420)
T 3vl1_A 318 WDLRSPECPVGEFLI-NEGTPINNVYFAAGALFVSSGFDT-----SIKLDIISD 365 (420)
T ss_dssp EETTCTTSCSEEEEE-STTSCEEEEEEETTEEEEEETTTE-----EEEEEEECC
T ss_pred EEcCCCcCchhhhhc-cCCCCceEEEeCCCCEEEEecCCc-----cEEEEeccC
Confidence 99876531 11111 011122233445888889988764 577777655
No 109
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.07 E-value=1.3 Score=51.14 Aligned_cols=118 Identities=14% Similarity=0.194 Sum_probs=73.1
Q ss_pred EEEECCEEEEEeecCCCcccceEEEEECCCCc--eEEeccCCCC--------cceEEEEEECCEEEEEecccCCCCCCeE
Q psy17309 504 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK--------RCYVSTAVHQDVIYAMGGYNGQRRQNSV 573 (824)
Q Consensus 504 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 573 (824)
-++.++.||+... ...++++|..+++ |+.-...+.. ....+.++.+++||+... ...+
T Consensus 62 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l 129 (668)
T 1kv9_A 62 PLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGRL 129 (668)
T ss_dssp CEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CCEE
Confidence 3567999999864 2579999998876 8864433211 011234567889988642 2579
Q ss_pred EEEeCCCCc--EEeecCCCc--ccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCe--EEEc
Q psy17309 574 EKYNYTENQ--WSLIAPMNV--ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLI 633 (824)
Q Consensus 574 ~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 633 (824)
+.+|..|.+ |+.-..-+. .....+.++.++.+|+..+.........+..||+++++ |+.-
T Consensus 130 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 999998875 876432111 11222335568888874332111234579999998875 8764
No 110
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.05 E-value=1.3 Score=47.26 Aligned_cols=187 Identities=9% Similarity=0.090 Sum_probs=98.3
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++..++.|+.+ ..+..||..+++-...-... ...-.+++.. ++.+++.|+.+ ..+.+||..+.+- +
T Consensus 108 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~--~ 174 (420)
T 3vl1_A 108 QMRRFILGTTE-----GDIKVLDSNFNLQREIDQAH-VSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSN--P 174 (420)
T ss_dssp SSCEEEEEETT-----SCEEEECTTSCEEEEETTSS-SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCC--C
T ss_pred CCCEEEEEECC-----CCEEEEeCCCcceeeecccc-cCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcC--c
Confidence 67778888754 35888998876543332111 1122233333 56677777743 4688899876542 1
Q ss_pred cCCCcccCc-eEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCC-CCCCcceEEEE----------------
Q psy17309 587 APMNVERSD-ASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RHRRSGVSCIA---------------- 647 (824)
Q Consensus 587 ~~~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~---------------- 647 (824)
..+...... .+++.. ++..++.|+.+ ..+..||..+.+-...-.. .........+.
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred eEEcCCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 111111111 222233 56666777755 3688899887653322111 11111111111
Q ss_pred -------ECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCE-EEEEccCCCCceeeEEEEE
Q psy17309 648 -------YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDM-IFAIGGFNGVTTIYHVECY 717 (824)
Q Consensus 648 -------~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~y 717 (824)
-+++.++.|+.+ ..+.+||+.+.+-...-..... .....+.+ ++. +++.|+.++ .+.+|
T Consensus 250 v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~g~~dg-----~i~vw 318 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVS-----GVITVHNVFSKEQTIQLPSKFT-CSCNSLTVDGNNANYIYAGYENG-----MLAQW 318 (420)
T ss_dssp CCTTCSSCTTEEEEEEETT-----SCEEEEETTTCCEEEEECCTTS-SCEEEEEECSSCTTEEEEEETTS-----EEEEE
T ss_pred ccceEEcCCCCEEEEEcCC-----CeEEEEECCCCceeEEcccccC-CCceeEEEeCCCCCEEEEEeCCC-----eEEEE
Confidence 156777777754 4588999877653222111111 11222233 444 788887665 68899
Q ss_pred ECCCCc
Q psy17309 718 DEKTDE 723 (824)
Q Consensus 718 d~~~~~ 723 (824)
|..+..
T Consensus 319 d~~~~~ 324 (420)
T 3vl1_A 319 DLRSPE 324 (420)
T ss_dssp ETTCTT
T ss_pred EcCCCc
Confidence 988753
No 111
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.02 E-value=0.89 Score=53.76 Aligned_cols=210 Identities=8% Similarity=0.052 Sum_probs=118.7
Q ss_pred ceEEEEECCCCcEEEcccCCCCCC-CceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccC----CCCcc-
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGP-RAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM----NFKRC- 547 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~----~~~r~- 547 (824)
..+..||+.++++..+.......+ ..-.+++.. ++.|++... +.+++||+.+++|...... ..+..
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQ 499 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCce
Confidence 458899999988877543211111 122233332 466766432 3489999999999877543 11111
Q ss_pred eEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecC---CCcccCceEEE-EE--CCEEEEEcccCCCCcCCce
Q psy17309 548 YVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP---MNVERSDASAT-TL--QGKIYITGGFNGHNCLNSC 620 (824)
Q Consensus 548 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~---~p~~r~~~~~~-~~--~~~lyv~GG~~~~~~~~~v 620 (824)
-.+++. -+|.|++... .-+.+||+.++++ .... .+........+ .. +|.|++... .-+
T Consensus 500 i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl 564 (795)
T 4a2l_A 500 ITTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGF 564 (795)
T ss_dssp EEEEEECTTCCEEEEES-------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCE
T ss_pred EEEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCc
Confidence 122222 2567887542 3488999998888 4431 11111111122 22 577887432 248
Q ss_pred EEEeCCCCeEEEcC---CCCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCCEEECC---CCCCCCcce-EE
Q psy17309 621 EVYDPECNQWTLIE---PMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP---DMYNPRSNF-AI 692 (824)
Q Consensus 621 ~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~-~~ 692 (824)
.+||+.+++++... .+|.... .+++.- +|.||+.+. +.+.+||+++.+++... .++...... ++
T Consensus 565 ~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~ 636 (795)
T 4a2l_A 565 YCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTESDGLQSNQFNTASY 636 (795)
T ss_dssp EEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEE
T ss_pred eeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCCccccCccCce
Confidence 89999999988764 3443322 233332 578888763 46889999999887663 344433322 23
Q ss_pred EEE-CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 693 EVI-DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 693 ~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
+.. +|.||+ ||.+ -+..|||+.
T Consensus 637 ~~~~~G~l~~-g~~~------Gl~~~~p~~ 659 (795)
T 4a2l_A 637 CRTSVGQMYF-GGIN------GITTFRPEL 659 (795)
T ss_dssp EECTTSCEEE-EETT------EEEEECGGG
T ss_pred eECCCCeEEE-ecCC------ceEEEcHHH
Confidence 333 566665 4443 356677754
No 112
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.02 E-value=1.5 Score=44.16 Aligned_cols=207 Identities=8% Similarity=-0.012 Sum_probs=109.5
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCc--EEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCc-
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADR--WVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV- 535 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~- 535 (824)
+.+++.|. ....+..+|+++.+ |.. .. ......+.+... ++.+++.+. +.++.||+ +++
T Consensus 5 ~~~lv~~~-----~~~~v~~~d~~tG~~~w~~--~~--~~~~~~~~~~~~pdG~ilvs~~-------~~V~~~d~-~G~~ 67 (276)
T 3no2_A 5 QHLLVGGS-----GWNKIAIINKDTKEIVWEY--PL--EKGWECNSVAATKAGEILFSYS-------KGAKMITR-DGRE 67 (276)
T ss_dssp CEEEEECT-----TCSEEEEEETTTTEEEEEE--EC--CTTCCCCEEEECTTSCEEEECB-------SEEEEECT-TSCE
T ss_pred CcEEEeeC-----CCCEEEEEECCCCeEEEEe--CC--CccCCCcCeEECCCCCEEEeCC-------CCEEEECC-CCCE
Confidence 45566654 23678899987775 554 11 111122344443 777877432 56999999 554
Q ss_pred -eEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCc-EEee--cCCCc--ccCceEEEEECCEEEEE
Q psy17309 536 -WKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSLI--APMNV--ERSDASATTLQGKIYIT 608 (824)
Q Consensus 536 -W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~~~--~~~p~--~r~~~~~~~~~~~lyv~ 608 (824)
|+.-.+ .....+++... +|.+++..+.. ...++.+|+..+. |+.. ...+. ..........+|.+++.
T Consensus 68 ~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 68 LWNIAAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp EEEEECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE
T ss_pred EEEEcCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEE
Confidence 764332 11122333333 66776664421 2467888885542 4432 11111 11122223346666665
Q ss_pred cccCCCCcCCceEEEeCCCC-eEEEcCCCCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCC--EEECC-CC
Q psy17309 609 GGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQVP-DM 683 (824)
Q Consensus 609 GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~-~~ 683 (824)
... ...+.+||++-. .|+.-.+. ..+++... ++.+++.+..+ ..+..+|+++.+ |+.-. .+
T Consensus 142 ~~~-----~~~v~~~d~~G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 142 LFA-----TSEVREIAPNGQLLNSVKLSG----TPFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp ETT-----TTEEEEECTTSCEEEEEECSS----CCCEEEECTTSCEEEECBTT-----SEEEEECTTTCCEEEEEEGGGS
T ss_pred ecC-----CCEEEEECCCCCEEEEEECCC----CccceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEEEEecCCCC
Confidence 432 256899999732 37654321 12233434 68888877642 469999999654 66542 22
Q ss_pred CCCCc--ceEEEEE-CCEEEEEc
Q psy17309 684 YNPRS--NFAIEVI-DDMIFAIG 703 (824)
Q Consensus 684 p~~r~--~~~~~~~-~~~i~v~G 703 (824)
+..+. -.+++.. ++.+|+..
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCccccccccceEcCCCCEEEEe
Confidence 22222 1223333 88999887
No 113
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.02 E-value=0.11 Score=54.80 Aligned_cols=184 Identities=11% Similarity=0.074 Sum_probs=96.1
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-C-CEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-Q-DVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
++..++.|+.+ ..+..||..+++-...-..... .-.+++.. + +.+++.||.+ ..+.+||..+.+-..
T Consensus 150 dg~~l~sgs~d-----g~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 150 DGTQAVSGGKD-----FSVKVWDLSQKAVLKSYNAHSS-EVNCVAACPGKDTIFLSCGED-----GRILLWDTRKPKPAT 218 (357)
T ss_dssp SSSEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTCSSCEEEEETT-----SCEEECCTTSSSCBC
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCceeeeeccC-----CceEEEECCCCceee
Confidence 66777778755 3588899988764322111111 11223332 3 3577777754 357888887765322
Q ss_pred ecCCCcccCceEEEEE---CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CC-EEEEEecCC
Q psy17309 586 IAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HE-CIYVIGGFN 659 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~ 659 (824)
.............+.. ++.+++.|+.+ ..+..||..+.+-. ..+........++.+ ++ ++++.|+.+
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~~~~~~~--~~~~~~~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNIKNPDSA--QTSAVHSQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEESSCGGGC--EEECCCSSCEEEEEECSSSSCCEEEEETT
T ss_pred eeeeccccccccchhhhhcccceEEEeecc-----cceeEEECCCCcEe--EEEeccceeEEEEEEcCCCCCEEEEEeCC
Confidence 2222222222223333 45677777755 35788888765411 111212222233333 33 566667654
Q ss_pred CCCccceEEEEeCCCCCEEECCCCCCCCcceEEEE--ECCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 660 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
..|.+||..+.+-... +.....-.+++. .++++++.||.++ .|.+||..+
T Consensus 292 -----~~i~iwd~~~~~~~~~--~~H~~~V~~vafsP~d~~~l~s~s~Dg-----~v~iW~~~~ 343 (357)
T 4g56_B 292 -----CTVAVLDADFSEVFRD--LSHRDFVTGVAWSPLDHSKFTTVGWDH-----KVLHHHLPS 343 (357)
T ss_dssp -----SCEEEECTTSCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETTS-----CEEEEECC-
T ss_pred -----CEEEEEECCCCcEeEE--CCCCCCEEEEEEeCCCCCEEEEEcCCC-----eEEEEECCC
Confidence 4688899887654332 111111122222 2678888888776 467777644
No 114
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.00 E-value=0.53 Score=47.93 Aligned_cols=196 Identities=13% Similarity=0.248 Sum_probs=96.9
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE--C--CEEEEEecccCCCCCCeEEEEeCCCCc-E
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--Q--DVIYAMGGYNGQRRQNSVEKYNYTENQ-W 583 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~t~~-W 583 (824)
+.+++.|+.+ ..+..||..+++|..+..+.........+.. + +.+++.|+.+ ..+..||..+.. +
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKENGTT 136 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSSSCB
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCCCce
Confidence 5677777755 4688899988877554433222222222222 2 5677777754 457777776542 2
Q ss_pred EeecCCCcccCceEEEEE---------------CCEEEEEcccCCCCcCCceEEEeCCCC--eEEEcCCCCCCCcceEEE
Q psy17309 584 SLIAPMNVERSDASATTL---------------QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCI 646 (824)
Q Consensus 584 ~~~~~~p~~r~~~~~~~~---------------~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~ 646 (824)
.... +.........+.. ++++++.||.++ .+..||..+. .|.....+.........+
T Consensus 137 ~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 137 SPII-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp CCEE-EECCSSCEEEEEECCCC------------CCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred eeee-eecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence 1100 0000001111111 245777777653 5667776543 355444443323333333
Q ss_pred EE--C---CEEEEEecCCCCCccceEEEEeCCC--CCEEE--CCCCCCCCcceEEEE-ECCEEEEEccCCCCceeeEEEE
Q psy17309 647 AY--H---ECIYVIGGFNGMSRMCNGEKYNPVT--KTWSQ--VPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVEC 716 (824)
Q Consensus 647 ~~--~---~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~--~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~ 716 (824)
.+ + +.+++.|+.+ ..+.++|+.+ ..|.. +........-.+++. .++++++.||.++ .+.+
T Consensus 211 ~~sp~~~~~~~las~s~D-----~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~-----~v~l 280 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQD-----RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTL 280 (297)
T ss_dssp EECCCCSSSEEEEEEETT-----SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS-----CEEE
T ss_pred EECCCCCCceEEEEEECC-----CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC-----cEEE
Confidence 33 2 3677777754 3566777654 33543 210111111112221 2678888888765 3566
Q ss_pred EECC-CCcEEeccCC
Q psy17309 717 YDEK-TDEWYEATDM 730 (824)
Q Consensus 717 yd~~-~~~W~~~~~~ 730 (824)
|+.. .+.|..+..+
T Consensus 281 w~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 281 WKENLEGKWEPAGEV 295 (297)
T ss_dssp EEECTTSCEEEC---
T ss_pred EEECCCCcEEecccc
Confidence 6654 4678877544
No 115
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.00 E-value=0.023 Score=60.36 Aligned_cols=190 Identities=10% Similarity=0.096 Sum_probs=96.0
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCc-EE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQ-WS 584 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~ 584 (824)
++.+++.|+.+ ..+..||..++.|..+..+.........+.. ++..++.|+.+ ..+.+||..+.. |.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCC
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCcee
Confidence 35556666543 4577888888888877766543333233333 56777777754 458888888776 54
Q ss_pred eecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCe-EEEcCCCCC-CCcceEEEEE--CCEEEEEecC
Q psy17309 585 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRH-RRSGVSCIAY--HECIYVIGGF 658 (824)
Q Consensus 585 ~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~ 658 (824)
....+.........+.+ ++++++.|+.+ ..+..||..+.+ |.....+.. .......+.+ ++++++.|+.
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 44333222222223332 56677777754 357788877664 333332222 1222223333 5777788876
Q ss_pred CCCCccceEEEEeCCCCCE----------------EECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECC
Q psy17309 659 NGMSRMCNGEKYNPVTKTW----------------SQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 720 (824)
Q Consensus 659 ~~~~~~~~v~~yd~~~~~W----------------~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 720 (824)
+ ..+..||..+... ..+..+ ........+.+ ++++++.|+.++ .+.+||..
T Consensus 167 d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~-----~i~iwd~~ 235 (377)
T 3dwl_C 167 D-----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS-----SVTIAYPS 235 (377)
T ss_dssp S-----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT-----EEC-CEEC
T ss_pred C-----CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC-----cEEEEECC
Confidence 4 4577788754321 111122 11111222333 677888887655 57778877
Q ss_pred CCc
Q psy17309 721 TDE 723 (824)
Q Consensus 721 ~~~ 723 (824)
+.+
T Consensus 236 ~~~ 238 (377)
T 3dwl_C 236 APE 238 (377)
T ss_dssp STT
T ss_pred CCC
Confidence 654
No 116
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.98 E-value=1.3 Score=51.36 Aligned_cols=118 Identities=18% Similarity=0.266 Sum_probs=73.0
Q ss_pred EEEECCEEEEEeecCCCcccceEEEEECCCCc--eEEeccCCCC--------cceEEEEEECCEEEEEecccCCCCCCeE
Q psy17309 504 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK--------RCYVSTAVHQDVIYAMGGYNGQRRQNSV 573 (824)
Q Consensus 504 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 573 (824)
-++.++.||+.+. ...++++|..+++ |+.-...+.. ....+.++.+++||+... -..+
T Consensus 66 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRL 133 (689)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEE
Confidence 3467999999764 2569999998876 8864433211 111234567889888643 2578
Q ss_pred EEEeCCCCc--EEeecC-CCc--ccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCe--EEEc
Q psy17309 574 EKYNYTENQ--WSLIAP-MNV--ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLI 633 (824)
Q Consensus 574 ~~yd~~t~~--W~~~~~-~p~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 633 (824)
..+|..|.+ |+.-.. -+. .....+-++.++.+|+-.+.........+..||..|++ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998875 876542 111 11222335568988874332111234579999998876 8764
No 117
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.93 E-value=0.94 Score=47.46 Aligned_cols=226 Identities=13% Similarity=0.125 Sum_probs=111.9
Q ss_pred EEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEe
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 539 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 539 (824)
..++.|+. -..+..||..+.+.... ...+. ..-.+++.. ++..++.||.+ ..+..|+.....-...
T Consensus 77 ~~l~s~s~-----Dg~v~vWd~~~~~~~~~--~~~~~-~~v~~~~~sp~g~~lasg~~d-----~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 77 RRIVSSSQ-----DGKVIVWDSFTTNKEHA--VTMPC-TWVMACAYAPSGCAIACGGLD-----NKCSVYPLTFDKNENM 143 (354)
T ss_dssp SEEEEEET-----TSEEEEEETTTCCEEEE--EECSS-SCCCEEEECTTSSEEEEESTT-----SEEEEEECCCCTTCCS
T ss_pred CEEEEEeC-----CCeEEEEECCCCCcceE--EecCC-CCEEEEEECCCCCEEEEeeCC-----CCEEEEEEeccccccc
Confidence 34555553 24677888766654331 11111 111223322 66777788754 3466776653311000
Q ss_pred cc----CCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE----CCEEEEEc
Q psy17309 540 AP----MNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----QGKIYITG 609 (824)
Q Consensus 540 ~~----~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~----~~~lyv~G 609 (824)
.. +.........+.. ++..++.|+.+ ..+..+|+.+.+-... +........+..+ ++.+++.|
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASGD-----GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEE
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEE
Confidence 00 0000111112222 44455555533 5688899888764321 1111111112222 35677888
Q ss_pred ccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCC
Q psy17309 610 GFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 687 (824)
Q Consensus 610 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 687 (824)
+.+ ..+..||..+.+....- ........++.+ ++..++.|+.+ ..+..||+.+..-...-......
T Consensus 217 s~D-----g~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~~~~~ 284 (354)
T 2pbi_B 217 GCD-----KKAMVWDMRSGQCVQAF--ETHESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIYSKESII 284 (354)
T ss_dssp ETT-----SCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCC
T ss_pred eCC-----CeEEEEECCCCcEEEEe--cCCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCcc
Confidence 765 46889998887653321 111122233333 57778888764 46788998766432221111111
Q ss_pred cceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 688 SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 688 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
.....+.+ ++++++.|+.++ .+.+||..+.+
T Consensus 285 ~~~~~~~~s~~g~~l~~g~~d~-----~i~vwd~~~~~ 317 (354)
T 2pbi_B 285 FGASSVDFSLSGRLLFAGYNDY-----TINVWDVLKGS 317 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCS
T ss_pred cceeEEEEeCCCCEEEEEECCC-----cEEEEECCCCc
Confidence 22223333 678888887655 58889986653
No 118
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.90 E-value=0.21 Score=52.44 Aligned_cols=215 Identities=10% Similarity=0.076 Sum_probs=105.5
Q ss_pred ceEEEEECCCCcEEEcccCCC-CCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce-EEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDP-MGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VST 551 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~-~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~ 551 (824)
..|..||..+++-........ .....-.+++.. ++..++.|+.+ ..+..||..+++-.. .+...... .++
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-----~~i~iwd~~~~~~~~--~~~~h~~~V~~~ 175 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-----ICIKVWDLAQQVVLS--SYRAHAAQVTCV 175 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE--EECCCSSCEEEE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEE--EEcCcCCceEEE
Confidence 457788877654211000000 001112233333 66777788755 358889998875322 22211111 222
Q ss_pred EEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCce-EEEEE--CCEEEEEcccCCCCcCCceEEEeCC
Q psy17309 552 AVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDA-SATTL--QGKIYITGGFNGHNCLNSCEVYDPE 626 (824)
Q Consensus 552 ~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~ 626 (824)
+.. +..+++.|+.+ ..+.+||..+.+-...-......... +++.. ++++++.|+.+ ..+..||..
T Consensus 176 ~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~ 245 (344)
T 4gqb_B 176 AASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTK 245 (344)
T ss_dssp EECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESC
T ss_pred EecCCCCCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC-----CcEEEEECC
Confidence 222 33577777754 45888998876533221111111112 22222 56788888765 367889987
Q ss_pred CCeEEEcCCCCCCCcceEEEEE--CC-EEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE---CCEEE
Q psy17309 627 CNQWTLIEPMRHRRSGVSCIAY--HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIF 700 (824)
Q Consensus 627 ~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~ 700 (824)
+.+- +..+........++.+ ++ ++++.|+.+ ..|.+||..+.+-..... . ......+.+ +..++
T Consensus 246 ~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D-----~~i~vwd~~~~~~~~~~~--H-~~~V~~v~~sp~~~~ll 315 (344)
T 4gqb_B 246 STSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSED-----CSLAVLDSSLSELFRSQA--H-RDFVRDATWSPLNHSLL 315 (344)
T ss_dssp C--C--CEEEECCSSCEEEEEECSSSSCCEEEEETT-----SCEEEECTTCCEEEEECC--C-SSCEEEEEECSSSTTEE
T ss_pred CCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCcEEEEcC--C-CCCEEEEEEeCCCCeEE
Confidence 6541 2122222222233333 34 566667654 467889987765333211 1 111222333 34678
Q ss_pred EEccCCCCceeeEEEEEECCC
Q psy17309 701 AIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 701 v~GG~~~~~~~~~v~~yd~~~ 721 (824)
+.||.++ .|.+|+..+
T Consensus 316 as~s~D~-----~v~~w~v~~ 331 (344)
T 4gqb_B 316 TTVGWDH-----QVVHHVVPT 331 (344)
T ss_dssp EEEETTS-----CEEEEECCC
T ss_pred EEEcCCC-----eEEEEECCC
Confidence 8888776 466666554
No 119
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.87 E-value=0.36 Score=51.97 Aligned_cols=221 Identities=8% Similarity=0.058 Sum_probs=110.3
Q ss_pred EEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEe
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 539 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 539 (824)
.+++.|+. ...+..||..+.+.... ... ....-.+++.. ++.+++.||.++ .+..||..+.+- +
T Consensus 121 ~~l~s~s~-----Dg~i~vwd~~~~~~~~~--l~~-h~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~~~--~ 185 (410)
T 1vyh_C 121 SVMVSASE-----DATIKVWDYETGDFERT--LKG-HTDSVQDISFDHSGKLLASCSADM-----TIKLWDFQGFEC--I 185 (410)
T ss_dssp SEEEEEES-----SSCEEEEETTTCCCCEE--ECC-CSSCEEEEEECTTSSEEEEEETTS-----CCCEEETTSSCE--E
T ss_pred CEEEEEeC-----CCeEEEEECCCCcEEEE--Eec-cCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCce--e
Confidence 34555543 23577888776653221 000 11112233333 567778887653 467788776542 2
Q ss_pred ccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCC
Q psy17309 540 APMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHN 615 (824)
Q Consensus 540 ~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~ 615 (824)
..+.........+.+ ++..++.||.+ ..+..||..+..-... +.........+.. ++.+++.|+.+
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D--- 255 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSND--- 255 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETT---
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCC---
Confidence 222222222222222 56667777754 5688899887754221 1111111222222 56777777765
Q ss_pred cCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE----------------------CCEEEEEecCCCCCccceEEEEeCC
Q psy17309 616 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY----------------------HECIYVIGGFNGMSRMCNGEKYNPV 673 (824)
Q Consensus 616 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------------------~~~iyv~GG~~~~~~~~~v~~yd~~ 673 (824)
..+..||..+...... +........++.+ .+.+++.|+.+ ..+.+||..
T Consensus 256 --~~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D-----~~i~iwd~~ 326 (410)
T 1vyh_C 256 --QTVRVWVVATKECKAE--LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD-----KTIKMWDVS 326 (410)
T ss_dssp --SCEEEEETTTCCEEEE--ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT-----SEEEEEETT
T ss_pred --CeEEEEECCCCceeeE--ecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC-----CeEEEEECC
Confidence 3577888777654321 1111111111111 25567777654 468889987
Q ss_pred CCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 674 TKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 674 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
+..=.. .+.........+.+ +++.++.||.++ .+.+||..+.
T Consensus 327 ~~~~~~--~~~~h~~~v~~v~~~~~g~~l~s~s~D~-----~i~vwd~~~~ 370 (410)
T 1vyh_C 327 TGMCLM--TLVGHDNWVRGVLFHSGGKFILSCADDK-----TLRVWDYKNK 370 (410)
T ss_dssp TTEEEE--EEECCSSCEEEEEECSSSSCEEEEETTT-----EEEEECCTTS
T ss_pred CCceEE--EEECCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 653211 11111111122223 677777887665 6788887654
No 120
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.85 E-value=3.3 Score=46.66 Aligned_cols=119 Identities=11% Similarity=0.115 Sum_probs=67.2
Q ss_pred CCCCCCEEEEEccCCCCCCCceEEEEEC-CCC--cEEEcccCCCCC-----C---CceeEEEEECCEEEEEeecCCCccc
Q psy17309 455 PRVPHEILFAIGGWSGGSPTDFVETYDT-RAD--RWVKIDQVDPMG-----P---RAYHGTAVIGYNIYVIGGFDGNEYY 523 (824)
Q Consensus 455 ~r~~~~~l~~~GG~~~~~~~~~~~~yd~-~~~--~W~~~~~~~~~~-----~---r~~~~~~~~~~~lyv~GG~~~~~~~ 523 (824)
|-...+.||+.... ...++++|. .+. .|..- ...+. . ....+.++.++.||+... .
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------d 124 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHK--PKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------N 124 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEEC--CCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------T
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEc--CCCCccccccccccccccccEEECCEEEEEeC------C
Confidence 33345666665431 346899998 665 48762 22110 0 112234567899988743 2
Q ss_pred ceEEEEECCCCc--eEEeccC-CCC-cceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCc--EEee
Q psy17309 524 NSCRCFNAVTKV--WKEIAPM-NFK-RCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLI 586 (824)
Q Consensus 524 ~~~~~yd~~~~~--W~~~~~~-~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~ 586 (824)
..++++|..+++ |+.-..- +.. ....+-++.++.||+..+.........++.||+.|.+ |+.-
T Consensus 125 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 569999998876 8743221 110 1112234568888876432111123679999998765 8653
No 121
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.82 E-value=1.3 Score=46.02 Aligned_cols=185 Identities=15% Similarity=0.201 Sum_probs=96.9
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCc--EE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WS 584 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~ 584 (824)
++.+++.|+.+ ..+..||..+.+-...-+..... -.+++. -++..++.||.+ ..+.+||..+.. ..
T Consensus 66 d~~~l~s~s~D-----g~v~iWd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 66 DSRLLLSASQD-----GKLIIWDSYTTNKVHAIPLRSSW-VMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNVR 134 (340)
T ss_dssp TSSEEEEEETT-----TEEEEEETTTCCEEEEEECSSSC-EEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSCE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCcceEeecCCcc-EEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcce
Confidence 45566777754 45888888776533221211111 122222 256777778754 567888877643 11
Q ss_pred eecCCCcccCceE-EEE-ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCC
Q psy17309 585 LIAPMNVERSDAS-ATT-LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNG 660 (824)
Q Consensus 585 ~~~~~p~~r~~~~-~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 660 (824)
....+........ +.. -++. ++.|+.+ ..+..||..+.+-... +........++.+ ++.+++.|+.+
T Consensus 135 ~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d- 205 (340)
T 1got_B 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD- 205 (340)
T ss_dssp EEEEEECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-
T ss_pred eEEEecCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC-
Confidence 1111111111111 222 2555 4555544 4688999988764322 2211122222333 67788888864
Q ss_pred CCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 661 MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 661 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
..+..||+.+..-... +.........+.+ +++.++.|+.++ .+.+||..+.+
T Consensus 206 ----~~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~-----~v~iwd~~~~~ 259 (340)
T 1got_B 206 ----ASAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDDA-----TCRLFDLRADQ 259 (340)
T ss_dssp ----SCEEEEETTTCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTE
T ss_pred ----CcEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCC-----cEEEEECCCCc
Confidence 4678899876643221 1111111222233 678888888765 57889987764
No 122
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.82 E-value=0.53 Score=48.06 Aligned_cols=220 Identities=9% Similarity=-0.016 Sum_probs=113.7
Q ss_pred ceEEEEECCCCcEEEcccCCCC-CCCceeEEEEE-C-CEEEEEeecCCCcccceEEEEECCCCceEEe-ccCCCC---cc
Q psy17309 475 DFVETYDTRADRWVKIDQVDPM-GPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI-APMNFK---RC 547 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~-~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~---r~ 547 (824)
..+..||+.+.++..+..+... ....-.+++.. + +.+|+.... +.+++||+. ++...+ ...... ..
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTTSCBCBC
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCCCccccC
Confidence 4688999988888764321000 11222344443 4 788887641 368999998 777665 332111 11
Q ss_pred eEEEEE-ECCEEEEEecccC----------CCCCCeEEEEeCCCCcEEeec-CCCcccCceEEEEE-----CC-EEEEEc
Q psy17309 548 YVSTAV-HQDVIYAMGGYNG----------QRRQNSVEKYNYTENQWSLIA-PMNVERSDASATTL-----QG-KIYITG 609 (824)
Q Consensus 548 ~~~~~~-~~~~iyv~GG~~~----------~~~~~~~~~yd~~t~~W~~~~-~~p~~r~~~~~~~~-----~~-~lyv~G 609 (824)
-..++. -++.+|+...... ......++++|+. .+...+. .+..+ .+.+.. ++ .||+..
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEE
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEE
Confidence 223333 3678888754220 1123578999987 5554432 11111 233333 34 577764
Q ss_pred ccCCCCcCCceEEEeCC-CCeEEE---cCCCCCCC-cceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCC
Q psy17309 610 GFNGHNCLNSCEVYDPE-CNQWTL---IEPMRHRR-SGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD 682 (824)
Q Consensus 610 G~~~~~~~~~v~~yd~~-~~~W~~---~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 682 (824)
.. ...+.+||+. +++... ...++... .....+.+ +|.||+.... ...+.+||+.+.+-...-.
T Consensus 195 ~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-----~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 195 TP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp TT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TTEEEEECTTCBSCSEEEE
T ss_pred CC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-----CCEEEEEcCCCCcEeEEEe
Confidence 32 2568888875 444322 11222221 12222333 5889987532 2478999998543211111
Q ss_pred CCCCCcceEEEEE--CCE-EEEEccCCCCceeeEEEEEECCCC
Q psy17309 683 MYNPRSNFAIEVI--DDM-IFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 683 ~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
.+. .....+.+ +++ ||+.+..+ ..+++|++++.
T Consensus 265 ~~~--~~~~~i~~~~dg~~l~v~~~~~-----~~l~~~~~~~~ 300 (314)
T 1pjx_A 265 CPF--EKPSNLHFKPQTKTIFVTEHEN-----NAVWKFEWQRN 300 (314)
T ss_dssp CSS--SCEEEEEECTTSSEEEEEETTT-----TEEEEEECSSC
T ss_pred CCC--CCceeEEECCCCCEEEEEeCCC-----CeEEEEeCCCC
Confidence 221 12223333 454 77765432 26888998764
No 123
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.82 E-value=0.25 Score=50.99 Aligned_cols=232 Identities=7% Similarity=-0.000 Sum_probs=117.3
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCce-
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVW- 536 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W- 536 (824)
+.+++..+. ...+..+|+.+.+....-... ....+++.. +..+|+.+..+ ..++.+|+.+++.
T Consensus 10 ~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 10 NFGIVVEQH-----LRRISFFSTDTLEILNQITLG----YDFVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPK 75 (331)
T ss_dssp CEEEEEEGG-----GTEEEEEETTTCCEEEEEECC----CCEEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCE
T ss_pred CEEEEEecC-----CCeEEEEeCcccceeeeEEcc----CCcceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCcee
Confidence 455555542 347889999998876532211 112233333 44577776522 4799999998874
Q ss_pred E-EeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CC-EEEEEccc
Q psy17309 537 K-EIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGF 611 (824)
Q Consensus 537 ~-~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~ 611 (824)
. .+.....++ ++++.. +..+| .+... .....+.++|+.+.+.... ++.....+.++.. ++ .+|+.+..
T Consensus 76 ~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~--~~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 76 VVAIQEGQSSM--ADVDITPDDQFAV-TVTGL--NHPFNMQSYSFLKNKFIST--IPIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp EEEEEECSSCC--CCEEECTTSSEEE-ECCCS--SSSCEEEEEETTTTEEEEE--EECCTTEEEEEECTTSSCEEEEEET
T ss_pred EEecccCCCCc--cceEECCCCCEEE-EecCC--CCcccEEEEECCCCCeEEE--EECCCCccceEECCCCCEEEEEecC
Confidence 2 222222222 212322 34566 33211 1123899999998875443 2222222444444 44 57777543
Q ss_pred CCCCcCCc-eEEEeCCCCe-EEEc--CCCCCCCcceEEEEE-CCE-EEEEecCCCCCccceEEEEeCCCCCE-EECCCCC
Q psy17309 612 NGHNCLNS-CEVYDPECNQ-WTLI--EPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCNGEKYNPVTKTW-SQVPDMY 684 (824)
Q Consensus 612 ~~~~~~~~-v~~yd~~~~~-W~~~--~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p 684 (824)
+ .. +..|+...+. .... ..++.......++.. +++ +|+.+.. ...+.+||+.+.+. ..+..++
T Consensus 149 ~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 149 S-----ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI-----GNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp T-----TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT-----TTEEEEEECSSTTSCEEEEEEE
T ss_pred C-----CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC-----CCeEEEEECCCCcccceeeecc
Confidence 2 34 6666654322 1111 111212222223322 454 7777643 25789999987664 1121122
Q ss_pred CCCcceEEEEE-CCE-EEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 685 NPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 685 ~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
.......++.. +++ ||+.... .+.+.+||+++.+.+.+
T Consensus 219 ~~~~~~~~~~spdg~~l~v~~~~-----~~~i~~~d~~~~~~~~~ 258 (331)
T 3u4y_A 219 TNNLPGTIVVSRDGSTVYVLTES-----TVDVFNFNQLSGTLSFV 258 (331)
T ss_dssp CSSCCCCEEECTTSSEEEEECSS-----EEEEEEEETTTTEEEEE
T ss_pred CCCCCceEEECCCCCEEEEEEcC-----CCEEEEEECCCCceeee
Confidence 22222223332 454 6766542 23588999999887544
No 124
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.82 E-value=0.76 Score=47.82 Aligned_cols=235 Identities=10% Similarity=0.037 Sum_probs=113.4
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
+..++.|+. ...+..||..+.+-... ... ....-.+++.. ++..++.|+.+ ..+..||..+.+-..
T Consensus 44 ~~~l~~~~~-----dg~i~vwd~~~~~~~~~--~~~-h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 44 GDLLFSCSK-----DSSASVWYSLNGERLGT--LDG-HTGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVA 110 (369)
T ss_dssp SCEEEEEES-----SSCEEEEETTTCCEEEE--ECC-CSSCEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEE
T ss_pred CCEEEEEeC-----CCEEEEEeCCCchhhhh--hhh-cCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 344555543 23578888877665431 111 11122233333 56667777654 468999998876543
Q ss_pred eccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCc----EEeecCCC-----ccc--CceEEEEE--CCE
Q psy17309 539 IAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQ----WSLIAPMN-----VER--SDASATTL--QGK 604 (824)
Q Consensus 539 ~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~----W~~~~~~p-----~~r--~~~~~~~~--~~~ 604 (824)
.-..+. .-.+++.. ++..++.++.+.......+..||..+.. +......+ ... .......+ +++
T Consensus 111 ~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 111 TWKSPV--PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEECSS--CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred EeecCC--CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 332221 12223222 5566666654322233567777766542 22211111 000 02222222 566
Q ss_pred EEEEcccCCCCcCCceEEEeCCC-CeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECC
Q psy17309 605 IYITGGFNGHNCLNSCEVYDPEC-NQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP 681 (824)
Q Consensus 605 lyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 681 (824)
.++.|+.+ ..+..||..+ ..-... +.........+.+ ++..++.|+.+ ..+.+||..+.+-...-
T Consensus 189 ~l~~~~~d-----g~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 189 YIIAGHKD-----GKISKYDVSNNYEYVDS--IDLHEKSISDMQFSPDLTYFITSSRD-----TNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEEEETT-----SEEEEEETTTTTEEEEE--EECCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEE
T ss_pred EEEEEcCC-----CEEEEEECCCCcEeEEE--EecCCCceeEEEECCCCCEEEEecCC-----ceEEEEECCCCceeeee
Confidence 66777654 4688999887 332211 1111222223333 67777777653 46889998876543322
Q ss_pred CCCCCCcceEEE-EECCEEEEEccCCCCc---------eeeEEEEEECCCCc
Q psy17309 682 DMYNPRSNFAIE-VIDDMIFAIGGFNGVT---------TIYHVECYDEKTDE 723 (824)
Q Consensus 682 ~~p~~r~~~~~~-~~~~~i~v~GG~~~~~---------~~~~v~~yd~~~~~ 723 (824)
..+ .....++ .-+++.+++|+.++.. ....+.+||..+.+
T Consensus 257 ~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 257 ETD--CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp ECS--SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred cCC--CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 111 1111222 2255666666544321 11257788876653
No 125
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=95.76 E-value=0.0063 Score=56.48 Aligned_cols=66 Identities=11% Similarity=0.162 Sum_probs=52.9
Q ss_pred ccceeEEeeecccchhhhheeecccc-------------------------eecCHhhHHHHHHHHhhcChHhHHHHHHH
Q psy17309 244 RQNSVEKYNYTENQDKIEEKKLFERK-------------------------LHITEDNVASLLLATDFFCMSKAQDLCCD 298 (824)
Q Consensus 244 ~~~~i~l~~~~~~~~~~ll~~~Yt~~-------------------------l~l~~~~v~~ll~~a~~~~i~~l~~~c~~ 298 (824)
....|.+++++..+++.+++|++.-. +.+..+.+.+|+.||++|+|..|.+.||+
T Consensus 48 ~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~ 127 (169)
T 3v7d_A 48 DEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCK 127 (169)
T ss_dssp --CEEECTTCCHHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCceeeCCCCHHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 34789999999999999999985432 35677889999999999999999999999
Q ss_pred HHhhcCCcchH
Q psy17309 299 FIKRLTTPRNC 309 (824)
Q Consensus 299 ~l~~~l~~~N~ 309 (824)
.+...+...+.
T Consensus 128 ~vA~~ikgktp 138 (169)
T 3v7d_A 128 VVAEMIRGRSP 138 (169)
T ss_dssp HHHHHHTTCCH
T ss_pred HHHHHHcCCCH
Confidence 88765554443
No 126
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.76 E-value=0.8 Score=51.90 Aligned_cols=121 Identities=13% Similarity=0.155 Sum_probs=71.5
Q ss_pred EEEEECCEEEEEeecCCCcccceEEEEEC-CCCc--eEEeccCCC-----Cc---ceEEEEE--ECCE----EEEEeccc
Q psy17309 503 GTAVIGYNIYVIGGFDGNEYYNSCRCFNA-VTKV--WKEIAPMNF-----KR---CYVSTAV--HQDV----IYAMGGYN 565 (824)
Q Consensus 503 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~-~~~~--W~~~~~~~~-----~r---~~~~~~~--~~~~----iyv~GG~~ 565 (824)
+-++.++.||+.+.. ...++++|. .+++ |+.-...+. .+ ...+.++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-- 129 (599)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC--
Confidence 345669999998652 246999999 7776 886543321 11 1123445 5777 887543
Q ss_pred CCCCCCeEEEEeCCCCc--EEeecCCCcc--cCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCe--EEEcC
Q psy17309 566 GQRRQNSVEKYNYTENQ--WSLIAPMNVE--RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIE 634 (824)
Q Consensus 566 ~~~~~~~~~~yd~~t~~--W~~~~~~p~~--r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 634 (824)
...+..+|..|.+ |+.-..-+.. ....+-++.+++||+-.+.........+..||.++++ |+.-.
T Consensus 130 ----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 ----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp ----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ----CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 2578999998875 8753221111 1122234568888874432111124578999998875 87653
No 127
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.74 E-value=0.26 Score=50.90 Aligned_cols=241 Identities=17% Similarity=0.183 Sum_probs=119.3
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE---CCEEEEEeecCCCcccceEEEEECCCCce
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 536 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 536 (824)
+..++.|+. ...+..||..+.+...+.... .....-.+++.. ++.+++.|+.+ ..+..||..+.+|
T Consensus 25 g~~lasgs~-----D~~v~lwd~~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 25 GTRLATCSS-----DRSVKIFDVRNGGQILIADLR-GHEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTW 93 (316)
T ss_dssp GCEEEEEET-----TTEEEEEEEETTEEEEEEEEE-CCSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCC
T ss_pred CCEEEEEeC-----CCeEEEEEecCCCcEEEEEEc-CCCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcc
Confidence 345566653 246778887765432211100 011112233332 25677777755 4588899988877
Q ss_pred EEeccCCCCcce-EEEEEE-C--CEEEEEecccCCCCCCeEEEEeCCCC-cEEeecCCCcccCceEEEEE----------
Q psy17309 537 KEIAPMNFKRCY-VSTAVH-Q--DVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERSDASATTL---------- 601 (824)
Q Consensus 537 ~~~~~~~~~r~~-~~~~~~-~--~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~r~~~~~~~~---------- 601 (824)
..+..+...... .+++.. + +.+++.|+.+ ..+..+|..+. .|.....+.........+..
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 654433221111 123322 2 5677777754 34677777664 56543222111111111111
Q ss_pred ---------CCEEEEEcccCCCCcCCceEEEeCCC-CeEEEcCCCCCCCcceEEEEE--C----CEEEEEecCCCCCccc
Q psy17309 602 ---------QGKIYITGGFNGHNCLNSCEVYDPEC-NQWTLIEPMRHRRSGVSCIAY--H----ECIYVIGGFNGMSRMC 665 (824)
Q Consensus 602 ---------~~~lyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~----~~iyv~GG~~~~~~~~ 665 (824)
.+++++.||.+ ..+..||..+ ..|..+..+.........+.+ + +.+++.|+.+ .
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D-----~ 238 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCD-----NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD-----G 238 (316)
T ss_dssp --CCSCCCCCCCBEECCBTT-----SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT-----C
T ss_pred ccccccCccccceEEEecCC-----CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC-----C
Confidence 13466667655 3566777753 457666555433333333333 2 2667777754 4
Q ss_pred eEEEEeCCC---CCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECC-CCcEEeccCCCC
Q psy17309 666 NGEKYNPVT---KTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK-TDEWYEATDMNI 732 (824)
Q Consensus 666 ~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~ 732 (824)
.+.++|..+ ..|... .+.........+.+ ++++++.||.++ .+.+|+.. ...|..+..+..
T Consensus 239 ~v~iw~~~~~~~~~~~~~-~~~~~~~~v~~v~~sp~g~~las~~~D~-----~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPK-LLHKFNDVVWHVSWSITANILAVSGGDN-----KVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp EEEEEECSSTTCCCCBCC-EEEECSSCEEEEEECTTTCCEEEEESSS-----CEEEEEECTTSCEEEEEECC-
T ss_pred eEEEEEccCccccchhhh-hhhcCCCcEEEEEEcCCCCEEEEEcCCC-----eEEEEEECCCCcEEEeeeccC
Confidence 677787765 233211 00000111112222 678888888765 46667754 467887765543
No 128
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.69 E-value=0.46 Score=50.26 Aligned_cols=182 Identities=4% Similarity=-0.018 Sum_probs=101.6
Q ss_pred EEEEEeecCCCcccceEEEEECCCCceEEeccCC-CCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 510 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 510 ~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
.+++.|+.+ ..+..||..+.+........ ....-.+++.. ++.+++.|+.+ ..+..+|..+.....+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEE
Confidence 567777654 45889999988776554432 22222334444 34677777643 5688899988776655
Q ss_pred cCCCcccCce-EEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCE-EEEEecCCCC
Q psy17309 587 APMNVERSDA-SATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HEC-IYVIGGFNGM 661 (824)
Q Consensus 587 ~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~ 661 (824)
.......... +++.. ++..++.|+.+ ..+..||.....-..+.. ......++.+ ++. +++.|+.+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~d-- 226 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKL---HKAKVTHAEFNPRCDWLMATSSVD-- 226 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEEC---SSSCEEEEEECSSCTTEEEEEETT--
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEecc---CCCcEEEEEECCCCCCEEEEEeCC--
Confidence 4332211212 22222 56677777755 468889985544333322 1222223333 344 77777754
Q ss_pred CccceEEEEeCCC----CCEEECCCCCCCCcceEEEEE---CCEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 662 SRMCNGEKYNPVT----KTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 662 ~~~~~v~~yd~~~----~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
..+.+||+.+ ....... .... ....+.+ +++.++.|+.++ .+.+||..+.
T Consensus 227 ---~~i~iwd~~~~~~~~~~~~~~--~~~~-~v~~~~~s~~~~~~l~~~~~d~-----~i~iwd~~~~ 283 (383)
T 3ei3_B 227 ---ATVKLWDLRNIKDKNSYIAEM--PHEK-PVNAAYFNPTDSTKLLTTDQRN-----EIRVYSSYDW 283 (383)
T ss_dssp ---SEEEEEEGGGCCSTTCEEEEE--ECSS-CEEEEEECTTTSCEEEEEESSS-----EEEEEETTBT
T ss_pred ---CEEEEEeCCCCCcccceEEEe--cCCC-ceEEEEEcCCCCCEEEEEcCCC-----cEEEEECCCC
Confidence 4688898876 3222211 1111 1222222 567888887654 6888998764
No 129
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.66 E-value=0.15 Score=60.07 Aligned_cols=189 Identities=13% Similarity=0.109 Sum_probs=106.4
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE--C--CEEEEEecccCCCCCCeEEEEeCCCCcEE
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--Q--DVIYAMGGYNGQRRQNSVEKYNYTENQWS 584 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 584 (824)
+..++.||.+ ..+..||..++++..+..+.........+.. + +..++.|+.+ ..+.+||..+++|.
T Consensus 21 g~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~~ 90 (753)
T 3jro_A 21 GKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRWS 90 (753)
T ss_dssp SCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEEE
T ss_pred CCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCccc
Confidence 4556667654 4588888887777766655433333333333 3 6777778754 45889999999887
Q ss_pred eecCCCcccCceEEEEE--C--CEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE------------
Q psy17309 585 LIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY------------ 648 (824)
Q Consensus 585 ~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~------------ 648 (824)
.+..+.........+.. + +.+++.|+.+ ..+..||..+..-.....+........++..
T Consensus 91 ~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 91 QIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred ccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence 76555443333334433 3 6778888765 3677888776521111000111111122222
Q ss_pred ---CCEEEEEecCCCCCccceEEEEeCCCC--CEEECCCCCCCCcceEEEEE--C---CEEEEEccCCCCceeeEEEEEE
Q psy17309 649 ---HECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVI--D---DMIFAIGGFNGVTTIYHVECYD 718 (824)
Q Consensus 649 ---~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~~yd 718 (824)
++.+++.|+.+ ..+..||..+. .+..+..+.........+.+ + +++++.||.++ .+.+||
T Consensus 166 ~~~d~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-----~I~iwd 235 (753)
T 3jro_A 166 GTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIWT 235 (753)
T ss_dssp -CGGGCCEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-----CEEEEE
T ss_pred cCCCCCEEEEEECC-----CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-----EEEEec
Confidence 35677777754 35777777544 34443333222222233333 4 78999998765 477888
Q ss_pred CCCC
Q psy17309 719 EKTD 722 (824)
Q Consensus 719 ~~~~ 722 (824)
+.+.
T Consensus 236 ~~~~ 239 (753)
T 3jro_A 236 QDNE 239 (753)
T ss_dssp ESSS
T ss_pred CCCC
Confidence 7764
No 130
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.65 E-value=0.3 Score=49.87 Aligned_cols=196 Identities=10% Similarity=0.045 Sum_probs=102.7
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++.+|++.-. ...+++||+.+++...... + ..-.+++.. ++.+|+..+ +.+.+||+.+.+++.+
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~--~~~~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTM-D--APVSSVALRQSGGYVATIG-------TKFCALNWKEQSAVVL 88 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEEC-S--SCEEEEEEBTTSSEEEEET-------TEEEEEETTTTEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeC-C--CceEEEEECCCCCEEEEEC-------CeEEEEECCCCcEEEE
Confidence 3677777642 2578999999887654332 1 111233333 567666532 5799999999998876
Q ss_pred cCCCc----ccCceEEEEECCEEEEEcccCCC------CcCCceEEEeCCCCeEEEcC-CCCCCCcceEEEEE-CC-EEE
Q psy17309 587 APMNV----ERSDASATTLQGKIYITGGFNGH------NCLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAY-HE-CIY 653 (824)
Q Consensus 587 ~~~p~----~r~~~~~~~~~~~lyv~GG~~~~------~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~iy 653 (824)
...+. .+....++.-+|++|+..-.... .....++++|+.. +...+. .+. ...+.+.. ++ .+|
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~---~pngi~~spdg~~ly 164 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD---ISNGLDWSLDHKIFY 164 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES---BEEEEEECTTSCEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc---cccceEEcCCCCEEE
Confidence 54332 12222222226788874311110 1234688888753 333321 111 11223332 34 588
Q ss_pred EEecCCCCCccceEEEEeC--CCCCEEE---CCCCCCCCcce-EEEE-ECCEEEEEccCCCCceeeEEEEEECCCCcEEe
Q psy17309 654 VIGGFNGMSRMCNGEKYNP--VTKTWSQ---VPDMYNPRSNF-AIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~r~~~-~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
+.... ...+++||. .+..... +..++...... +++. -++.||+....+ ..|.+||+++.+...
T Consensus 165 v~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 165 YIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp EEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEECTTTCCEEE
T ss_pred EecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEcCCCceEEE
Confidence 87653 356888875 4444321 11121111112 2332 267888875322 258999999876654
Q ss_pred ccCCCC
Q psy17309 727 ATDMNI 732 (824)
Q Consensus 727 ~~~~p~ 732 (824)
.-.+|.
T Consensus 235 ~i~~p~ 240 (297)
T 3g4e_A 235 TVKLPV 240 (297)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 434443
No 131
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.63 E-value=0.44 Score=48.13 Aligned_cols=185 Identities=11% Similarity=-0.012 Sum_probs=100.4
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCc--eEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCC--cEE
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTEN--QWS 584 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~--~W~ 584 (824)
+.+++.|..+ ..+..+|+++++ |+.-..-. .......+.-+|.+++.+. +.+..||+ +. .|+
T Consensus 5 ~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~~-------~~V~~~d~-~G~~~W~ 70 (276)
T 3no2_A 5 QHLLVGGSGW-----NKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSYS-------KGAKMITR-DGRELWN 70 (276)
T ss_dssp CEEEEECTTC-----SEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEECB-------SEEEEECT-TSCEEEE
T ss_pred CcEEEeeCCC-----CEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeCC-------CCEEEECC-CCCEEEE
Confidence 5666666432 678899998876 66433211 1222333334788888432 56899999 44 376
Q ss_pred eecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCe-EEEcC--CCCCC--CcceEEEEECCEEEEEecC
Q psy17309 585 LIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIE--PMRHR--RSGVSCIAYHECIYVIGGF 658 (824)
Q Consensus 585 ~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~--~~p~~--r~~~~~~~~~~~iyv~GG~ 658 (824)
.-.+ .....+++... +|++++..+.+ ...+..+|++... |+.-- ..+.+ .........+|.+++....
T Consensus 71 ~~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 71 IAAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp EECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT
T ss_pred EcCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC
Confidence 5432 11122333333 67777664421 2467888885442 44321 11111 1112233346777766543
Q ss_pred CCCCccceEEEEeCCCC-CEEECCCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCC--cEEec
Q psy17309 659 NGMSRMCNGEKYNPVTK-TWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD--EWYEA 727 (824)
Q Consensus 659 ~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~ 727 (824)
...+.+||++.+ .|+.-... ..+++... ++.+++.+..++ .+..+|+++. .|+.-
T Consensus 145 -----~~~v~~~d~~G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~~~-----~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 145 -----TSEVREIAPNGQLLNSVKLSG----TPFSSAFLDNGDCLVACGDAH-----CFVQLNLESNRIVRRVN 203 (276)
T ss_dssp -----TTEEEEECTTSCEEEEEECSS----CCCEEEECTTSCEEEECBTTS-----EEEEECTTTCCEEEEEE
T ss_pred -----CCEEEEECCCCCEEEEEECCC----CccceeEcCCCCEEEEeCCCC-----eEEEEeCcCCcEEEEec
Confidence 257899999733 36654321 12234444 788888876432 6899999965 46553
No 132
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.57 E-value=0.7 Score=46.82 Aligned_cols=186 Identities=10% Similarity=0.183 Sum_probs=90.5
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE-E-CCEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-H-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
++..++.|+.+ ..+..||....... +.... ..-.+++. . ++..++.|+.+ ..+..||..... ..
T Consensus 113 ~~~~l~~~~~d-----~~i~~~d~~~~~~~-~~~~~--~~v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~-~~ 178 (313)
T 3odt_A 113 QDGVVISGSWD-----KTAKVWKEGSLVYN-LQAHN--ASVWDAKVVSFSENKFLTASAD-----KTIKLWQNDKVI-KT 178 (313)
T ss_dssp ETTEEEEEETT-----SEEEEEETTEEEEE-EECCS--SCEEEEEEEETTTTEEEEEETT-----SCEEEEETTEEE-EE
T ss_pred cCCEEEEEeCC-----CCEEEEcCCcEEEe-cccCC--CceeEEEEccCCCCEEEEEECC-----CCEEEEecCceE-EE
Confidence 45566667644 45778882221111 11111 11122222 2 56677777644 457788833221 11
Q ss_pred ecCCCcccCceEEE-EECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCC
Q psy17309 586 IAPMNVERSDASAT-TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 662 (824)
Q Consensus 586 ~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 662 (824)
.... ....-.+++ .-++. ++.|+.+ ..+..||..+.+-... +.........+.+ +++ ++.|+.+
T Consensus 179 ~~~~-~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~-l~~~~~d--- 245 (313)
T 3odt_A 179 FSGI-HNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDVLRT--YEGHESFVYCIKLLPNGD-IVSCGED--- 245 (313)
T ss_dssp ECSS-CSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSC-EEEEETT---
T ss_pred Eecc-CcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhhhhh--hhcCCceEEEEEEecCCC-EEEEecC---
Confidence 2211 111122233 23667 6666654 4688899877653221 1111122223333 454 5556543
Q ss_pred ccceEEEEeCCCCCEEECCCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCcEEeccC
Q psy17309 663 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATD 729 (824)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 729 (824)
..+..||..+.+-...-..+... -.+++.. +++ ++.|+.++ .+.+||..++++.....
T Consensus 246 --g~v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~-~~~~~~dg-----~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 246 --RTVRIWSKENGSLKQVITLPAIS-IWSVDCMSNGD-IIVGSSDN-----LVRIFSQEKSRWASEDE 304 (313)
T ss_dssp --SEEEEECTTTCCEEEEEECSSSC-EEEEEECTTSC-EEEEETTS-----CEEEEESCGGGCCC---
T ss_pred --CEEEEEECCCCceeEEEeccCce-EEEEEEccCCC-EEEEeCCC-----cEEEEeCCCCceeehhh
Confidence 57899999887644332222211 1122222 566 55676655 58899999887765533
No 133
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.54 E-value=0.58 Score=49.61 Aligned_cols=231 Identities=9% Similarity=0.076 Sum_probs=116.8
Q ss_pred EEEEccCCCCCCCceEEEEECCCCc-------EEEcccCCCCCCCceeEEEEE-C----C---EEEEEeecCCCcccceE
Q psy17309 462 LFAIGGWSGGSPTDFVETYDTRADR-------WVKIDQVDPMGPRAYHGTAVI-G----Y---NIYVIGGFDGNEYYNSC 526 (824)
Q Consensus 462 l~~~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~~~~~~r~~~~~~~~-~----~---~lyv~GG~~~~~~~~~~ 526 (824)
+++.|+. ...+..||..+.+ -..+.. ....-.+++.. + + .+++.|+.+ ..+
T Consensus 28 ~l~s~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d-----g~i 93 (397)
T 1sq9_A 28 FTVSCSG-----DGYLKVWDNKLLDNENPKDKSYSHFV----HKSGLHHVDVLQAIERDAFELCLVATTSFS-----GDL 93 (397)
T ss_dssp EEEEEET-----TSEEEEEESBCCTTCCGGGGEEEEEC----CTTCEEEEEEEEEEETTTEEEEEEEEEETT-----SCE
T ss_pred eEEEEcC-----CCEEEEEECCCcccccCCCcceEEec----CCCcEEEEEEecccccCCccccEEEEEcCC-----CCE
Confidence 4555543 2468888887765 333221 11122333333 4 6 788888754 358
Q ss_pred EEEECCCCc------eEEeccCCCC---cceEEEEEE-----CCEE-EEEecccCCCCCCeEEEEeCCC------Cc---
Q psy17309 527 RCFNAVTKV------WKEIAPMNFK---RCYVSTAVH-----QDVI-YAMGGYNGQRRQNSVEKYNYTE------NQ--- 582 (824)
Q Consensus 527 ~~yd~~~~~------W~~~~~~~~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~~~yd~~t------~~--- 582 (824)
..||..+.+ +..+...+.. ..-.+++.. ++.. ++.|+.+ ..+..||..+ ..
T Consensus 94 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 94 LFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp EEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEESSSSHHHHTTTC
T ss_pred EEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCCccccccccceee
Confidence 888887766 6666544311 222333333 4555 7777754 4577777665 21
Q ss_pred EEeecCC--------CcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCC-CCC---CcceEEEEE-
Q psy17309 583 WSLIAPM--------NVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RHR---RSGVSCIAY- 648 (824)
Q Consensus 583 W~~~~~~--------p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~---r~~~~~~~~- 648 (824)
|.....+ .....-.+++.. ++ +++.|+.+ ..+..||..+.+-...-.. ... ......+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 2111111 111122233333 56 67777654 4688999887654322111 001 222223333
Q ss_pred -CCEEEEEecCCCCCccceEEEEeCCCCCEEE-CCCCC--C--------CCcceEEEEE--CCEEEEEccCCCCceeeEE
Q psy17309 649 -HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-VPDMY--N--------PRSNFAIEVI--DDMIFAIGGFNGVTTIYHV 714 (824)
Q Consensus 649 -~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p--~--------~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v 714 (824)
++.+++.|+.++ ....+.+||..+.+-.. +...+ . .......+.+ ++++++.|+.++ .+
T Consensus 243 ~~~~~l~~~~~d~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i 315 (397)
T 1sq9_A 243 PQGSLLAIAHDSN--SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG-----KL 315 (397)
T ss_dssp SSTTEEEEEEEET--TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS-----EE
T ss_pred CCCCEEEEEecCC--CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC-----eE
Confidence 577777776421 01478899987664222 11100 0 1112222333 577788887654 68
Q ss_pred EEEECCCCcE
Q psy17309 715 ECYDEKTDEW 724 (824)
Q Consensus 715 ~~yd~~~~~W 724 (824)
.+||..+.+-
T Consensus 316 ~iwd~~~~~~ 325 (397)
T 1sq9_A 316 RFWDVKTKER 325 (397)
T ss_dssp EEEETTTTEE
T ss_pred EEEEcCCCce
Confidence 8999877643
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.53 E-value=0.86 Score=47.09 Aligned_cols=152 Identities=13% Similarity=0.128 Sum_probs=76.1
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 537 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 537 (824)
+.+++.++. ...+..+|+.+.+.... ...+.....+.++.. ++.+|+.+.. ...++.||+.+++-.
T Consensus 11 ~~~~v~~~~-----~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 11 HEYMIVTNY-----PNNLHVVDVASDTVYKS--CVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNT 78 (349)
T ss_dssp CEEEEEEET-----TTEEEEEETTTTEEEEE--EECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEE
T ss_pred CEEEEEeCC-----CCeEEEEECCCCcEEEE--EecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEE
Confidence 456666543 35789999998876532 111110012334443 3467777642 256999999988754
Q ss_pred EeccCCC-----CcceEEEEEE-CC-EEEEEeccc---CC---CCCCeEEEEeCCCCcEEe-ecCCCcccCceEEEEE-C
Q psy17309 538 EIAPMNF-----KRCYVSTAVH-QD-VIYAMGGYN---GQ---RRQNSVEKYNYTENQWSL-IAPMNVERSDASATTL-Q 602 (824)
Q Consensus 538 ~~~~~~~-----~r~~~~~~~~-~~-~iyv~GG~~---~~---~~~~~~~~yd~~t~~W~~-~~~~p~~r~~~~~~~~-~ 602 (824)
..-..+. ...-..++.. ++ .+|+.+... .. .....+.+||+.+++-.. +...+.++.-.+++.. +
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d 158 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 158 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCC
Confidence 3222221 1111223332 44 555544210 00 012579999988743211 1111222222333332 6
Q ss_pred CEEEEEcccCCCCcCCceEEEeCCCCeEE
Q psy17309 603 GKIYITGGFNGHNCLNSCEVYDPECNQWT 631 (824)
Q Consensus 603 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 631 (824)
+++|+.++ ++.++|+.+.+-.
T Consensus 159 g~l~~~~~--------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 159 GSLYVAGP--------DIYKMDVKTGKYT 179 (349)
T ss_dssp SCEEEESS--------SEEEECTTTCCEE
T ss_pred CcEEEccC--------cEEEEeCCCCcee
Confidence 67777432 3888888776543
No 135
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.51 E-value=2.7 Score=43.34 Aligned_cols=226 Identities=10% Similarity=0.021 Sum_probs=123.3
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCC--ceEEeccCC------CC
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTK--VWKEIAPMN------FK 545 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~------~~ 545 (824)
..+..+|+.+.+...... ......-+++++. ++.+|+.... ...+.+||+... .-..+.... ..
T Consensus 69 ~~i~~~d~~~g~~~~~~~--~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~ 141 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSG--KNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNH 141 (329)
T ss_dssp CCEEEECTTTCCEEEEEC--TTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTC
T ss_pred CcEEEEECCCCeEEeccC--CCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccc
Confidence 368999998777654211 1111223445544 6778887642 256899998765 233332110 01
Q ss_pred -cceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCC-------CcccC-ceEEEEE-C-CEEEEEcccC
Q psy17309 546 -RCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM-------NVERS-DASATTL-Q-GKIYITGGFN 612 (824)
Q Consensus 546 -r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~-------p~~r~-~~~~~~~-~-~~lyv~GG~~ 612 (824)
..-..+++. ++.||+..+. ....+.+||+....-..+... +.... -+++++- + +.|||....+
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~----~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGY----CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECS----SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred cCCCcEEEEeCCCCeEEEEeCC----CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 122344444 6899999752 136789999665544433211 11112 2334443 4 8999986532
Q ss_pred CCCcCCceEEEeCCCCeEEEcCCCC-CCCcceEEEEECCEEEEEecCCC--CCccceEEEEeCCCCCEEEC-CCCCCCCc
Q psy17309 613 GHNCLNSCEVYDPECNQWTLIEPMR-HRRSGVSCIAYHECIYVIGGFNG--MSRMCNGEKYNPVTKTWSQV-PDMYNPRS 688 (824)
Q Consensus 613 ~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~v~~yd~~~~~W~~~-~~~p~~r~ 688 (824)
+.+.+||+.+++....-..+ ......+.+...+.+|...|..- ......+.++|+.+.+.... ...+....
T Consensus 218 -----~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~ 292 (329)
T 3fvz_A 218 -----GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFD 292 (329)
T ss_dssp -----TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCS
T ss_pred -----CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccC
Confidence 57999999876654432222 22222334444577777777321 22245789999887765543 22122222
Q ss_pred ceEEEEE--CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 689 NFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 689 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
....+++ ++.|||....+. .|.+|+++.
T Consensus 293 ~p~~ia~~~dG~lyvad~~~~-----~I~~~~~~~ 322 (329)
T 3fvz_A 293 MPHDIVASEDGTVYIGDAHTN-----TVWKFTLTE 322 (329)
T ss_dssp SEEEEEECTTSEEEEEESSSC-----CEEEEEEEE
T ss_pred CeeEEEECCCCCEEEEECCCC-----EEEEEeCCc
Confidence 2233333 678999875433 577777643
No 136
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.49 E-value=2.2 Score=43.45 Aligned_cols=146 Identities=12% Similarity=0.168 Sum_probs=73.8
Q ss_pred CEEEEEeecCCCcccceEEEEECCCC-------ceEEeccCCCCcceE-EEEEE-C--CEEEEEecccCCCCCCeEEEEe
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTK-------VWKEIAPMNFKRCYV-STAVH-Q--DVIYAMGGYNGQRRQNSVEKYN 577 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~-------~W~~~~~~~~~r~~~-~~~~~-~--~~iyv~GG~~~~~~~~~~~~yd 577 (824)
+.+++.|+.+ ..+..||..+. .|..+..+....... +++.. + +.+++.|+.+ ..+..||
T Consensus 71 ~~~l~s~~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd 140 (351)
T 3f3f_A 71 GRIIASASYD-----KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYD 140 (351)
T ss_dssp CSEEEEEETT-----SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEE
T ss_pred CCEEEEEcCC-----CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEec
Confidence 6777888765 34777887654 344444333222222 23332 3 6677777743 4688888
Q ss_pred CCCCc----EEee---cCC---C--cccCceEEEEE----CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCc
Q psy17309 578 YTENQ----WSLI---APM---N--VERSDASATTL----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRS 641 (824)
Q Consensus 578 ~~t~~----W~~~---~~~---p--~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 641 (824)
..+.+ |... ..+ + ......+++.. ++.+++.|+.++ .+..++........+..++....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~h~~ 215 (351)
T 3f3f_A 141 ALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ-----AIIYQRGKDGKLHVAAKLPGHKS 215 (351)
T ss_dssp CSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE-----EEEEEECTTSCEEEEEECCCCCS
T ss_pred CCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC-----cEEEEccCCCceeeeeecCCCCc
Confidence 77654 2211 111 1 11111122221 266777777543 34555566666655544443333
Q ss_pred ceEEEEE--CC----EEEEEecCCCCCccceEEEEeCCC
Q psy17309 642 GVSCIAY--HE----CIYVIGGFNGMSRMCNGEKYNPVT 674 (824)
Q Consensus 642 ~~~~~~~--~~----~iyv~GG~~~~~~~~~v~~yd~~~ 674 (824)
....+.+ ++ .+++.|+.++ .+.+||..+
T Consensus 216 ~i~~~~~~p~~~~~~~~l~s~~~dg-----~i~iwd~~~ 249 (351)
T 3f3f_A 216 LIRSISWAPSIGRWYQLIATGCKDG-----RIRIFKITE 249 (351)
T ss_dssp CEEEEEECCCSSCSSEEEEEEETTS-----CEEEEEEEE
T ss_pred ceeEEEECCCCCCcceEEEEEcCCC-----eEEEEeCCC
Confidence 3333333 33 6788887643 456666543
No 137
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.48 E-value=0.29 Score=50.86 Aligned_cols=189 Identities=13% Similarity=0.171 Sum_probs=97.3
Q ss_pred CCEEEEEeecCCCcccceEEEEECCC--CceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVT--KVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
++..++.|+.+ ..+..||... ..+..+..+.........+.. ++.+++.|+.+ ..+..+|..+..|
T Consensus 118 ~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~ 187 (330)
T 2hes_X 118 DGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYDDDW 187 (330)
T ss_dssp TSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCCe
Confidence 35566667654 3578888743 345444333322222222222 56777777754 4577788877777
Q ss_pred EeecCCCcccCceEEEEE--C--CEEEEEcccCCCCcCCceEEEeCCC------CeEEEcCCCCC--CCcceEEEEECCE
Q psy17309 584 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPEC------NQWTLIEPMRH--RRSGVSCIAYHEC 651 (824)
Q Consensus 584 ~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~v~~yd~~~------~~W~~~~~~p~--~r~~~~~~~~~~~ 651 (824)
+.+..+.........+.+ + +..++.|+.++ .+..||..+ ..|.....++. ...-.+++...+.
T Consensus 188 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS
T ss_pred eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC
Confidence 665544322222222222 2 44566676553 455565432 24655544443 1222223333455
Q ss_pred EEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCc--ceEEEEE----CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 652 IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRS--NFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 652 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~--~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
+++.||.+ ..+.+||..+..|..+........ ....+.+ ++++++.||.++ .+.+||.++
T Consensus 263 ~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg-----~v~~W~~~~ 328 (330)
T 2hes_X 263 LIASVGAD-----GVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG-----IVNFWSLEK 328 (330)
T ss_dssp CEEEEETT-----SCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS-----EEEEEEC--
T ss_pred EEEEEeCC-----CEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC-----cEEEEEecc
Confidence 66677754 467788888888865532211111 1222222 467888888766 577777654
No 138
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.45 E-value=2.6 Score=47.51 Aligned_cols=117 Identities=15% Similarity=0.168 Sum_probs=69.1
Q ss_pred EEEECCEEEEEeecCCCcccceEEEEECCCCc--eEEeccCCCC---c---ceEEEEEECCEEEEEecccCCCCCCeEEE
Q psy17309 504 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK---R---CYVSTAVHQDVIYAMGGYNGQRRQNSVEK 575 (824)
Q Consensus 504 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~---r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 575 (824)
-++.++.||+.+.. +.++++|..+++ |+.-...+.. . ...+.++.+++||+... ...+..
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 35679999998752 249999998876 8865433221 0 11234567899988542 257999
Q ss_pred EeCCCCc--EEeecCCCccc--CceEEEEECC------EEEEEcccCC-CCcCCceEEEeCCCCe--EEEc
Q psy17309 576 YNYTENQ--WSLIAPMNVER--SDASATTLQG------KIYITGGFNG-HNCLNSCEVYDPECNQ--WTLI 633 (824)
Q Consensus 576 yd~~t~~--W~~~~~~p~~r--~~~~~~~~~~------~lyv~GG~~~-~~~~~~v~~yd~~~~~--W~~~ 633 (824)
+|..|.+ |+.-..-+... ...+-++.++ .||+ |...+ ......+..||+++++ |+.-
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeecC
Confidence 9998875 87543221111 1112234455 6665 33211 1224578999998765 8653
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.44 E-value=1.9 Score=44.23 Aligned_cols=230 Identities=8% Similarity=0.013 Sum_probs=107.7
Q ss_pred ceEEEEECC-CCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECC--CCceEEeccCCCCcceE
Q psy17309 475 DFVETYDTR-ADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAV--TKVWKEIAPMNFKRCYV 549 (824)
Q Consensus 475 ~~~~~yd~~-~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~ 549 (824)
..+..||.. +.+...+.... ....-.+++.. +..+|+.+. .. ..+..|+.. ++++..+..++.+..-.
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~-~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGVR-PE----FRVLAYRIAPDDGALTFAAESALPGSLT 87 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEET-TT----TEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred CeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEeec-CC----CeEEEEEecCCCCceeeccccccCCCCc
Confidence 457777764 34443321111 11111223333 344655543 21 457776665 77887665443322222
Q ss_pred EEEEE-CC-EEEEEecccCCCCCCeEEEEeCCCC-cEEeecCCCcccCceEEEEE-C-CEEEEEcccCCCCcCCceEEEe
Q psy17309 550 STAVH-QD-VIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERSDASATTL-Q-GKIYITGGFNGHNCLNSCEVYD 624 (824)
Q Consensus 550 ~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd 624 (824)
.++.. ++ .+|+.+.. ...+.+||.... ..+.+...+.....++++.. + ..||+.+..+ ..+..||
T Consensus 88 ~~~~s~dg~~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d 157 (343)
T 1ri6_A 88 HISTDHQGQFVFVGSYN-----AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-----DRICLFT 157 (343)
T ss_dssp EEEECTTSSEEEEEETT-----TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-----TEEEEEE
T ss_pred EEEEcCCCCEEEEEecC-----CCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC-----CEEEEEE
Confidence 33333 44 46665432 246888887422 22222222222222333333 3 4677765332 4688999
Q ss_pred CCC-CeEEEcC----CCCCCCcceEEEEE-CC-EEEEEecCCCCCccceEEEEeCC--CCCEEE---CCCCCCC---Ccc
Q psy17309 625 PEC-NQWTLIE----PMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPV--TKTWSQ---VPDMYNP---RSN 689 (824)
Q Consensus 625 ~~~-~~W~~~~----~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~---~~~~p~~---r~~ 689 (824)
..+ .+...+. ..+.......++.. ++ .+|+.+.. ...+.+||.. +.++.. +..++.. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCcEEEEeeccccCccccccCC
Confidence 887 6665332 11211111122222 44 47777643 2568888884 344432 2223322 112
Q ss_pred eEEEEE--CC-EEEEEccCCCCceeeEEEEEECC--CCcEEeccCCC
Q psy17309 690 FAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEK--TDEWYEATDMN 731 (824)
Q Consensus 690 ~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p 731 (824)
...+.+ ++ .||+.+..++ .+.+||+. +.+++.+..++
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~~-----~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTAS-----LITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTT-----EEEEEEECTTSCCEEEEEEEE
T ss_pred ccceEECCCCCEEEEEecCCC-----EEEEEEEcCCCCceEEeeeec
Confidence 222333 34 6766654332 57788876 55666664443
No 140
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.35 E-value=2.9 Score=44.24 Aligned_cols=186 Identities=10% Similarity=-0.018 Sum_probs=93.4
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++.+++.|+.+ ..+..||........+.... ..-.+++.. ++..++.|+.+ ..+..||..+.+....
T Consensus 119 ~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 119 DGNSIVTGVEN-----GELRLWNKTGALLNVLNFHR--APIVSVKWNKDGTHIISMDVE-----NVTILWNVISGTVMQH 186 (425)
T ss_dssp TSSEEEEEETT-----SCEEEEETTSCEEEEECCCC--SCEEEEEECTTSSEEEEEETT-----CCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeeccCCC--ccEEEEEECCCCCEEEEEecC-----CeEEEEECCCCcEEEE
Confidence 56677777754 35788884444333333211 112233332 56666666643 4578889887765433
Q ss_pred cCCCccc--------------CceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcc-eEEEEE-CC
Q psy17309 587 APMNVER--------------SDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSG-VSCIAY-HE 650 (824)
Q Consensus 587 ~~~p~~r--------------~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~ 650 (824)
-..+... ...+++...+..+++|+.+ ..+..||..+.+-... +...... .+++.. ++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~~ 259 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGK--LIGHHGPISVLEFNDTN 259 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTEEEEECGG-----GCEEEEETTCSSCSEE--ECCCSSCEEEEEEETTT
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-----CeEEEEEcCCCceeee--eccCCCceEEEEECCCC
Confidence 2222111 0222333333345666654 4688999887542211 1111111 222222 56
Q ss_pred EEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 651 CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 651 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
+.++.|+.+ ..+.+||..+.+-...-.. ....-.+++.. ++ +++.|+.++ .+.+||..+.+-
T Consensus 260 ~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~-----~i~i~d~~~~~~ 322 (425)
T 1r5m_A 260 KLLLSASDD-----GTLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMDG-----SVRLWSLKQNTL 322 (425)
T ss_dssp TEEEEEETT-----SCEEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETTS-----EEEEEETTTTEE
T ss_pred CEEEEEcCC-----CEEEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCCC-----cEEEEECCCCcE
Confidence 677777753 4678888876432111110 11112233333 55 777776654 688899877653
No 141
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.35 E-value=1.1 Score=48.18 Aligned_cols=219 Identities=12% Similarity=0.167 Sum_probs=106.9
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
+.|..+|..+++...+-..... ...-.+++.. ++..++.|+.+ ..+..||..+++-... +...........
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~-~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~--~~~h~~~v~~~s 196 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRN--MTSHSARVGSLS 196 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCC-CCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEE--EeCCCCceEEEe
Confidence 4789999999876653111111 1112233333 66777888765 3588999988754322 222222233445
Q ss_pred ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCe--
Q psy17309 554 HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-- 629 (824)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~-- 629 (824)
.++.+.+.|+.+ ..+..+|..+..... ..+............ ++..++.|+.+ +.+..+|..+.+
T Consensus 197 ~~~~~l~sgs~d-----~~i~~~d~~~~~~~~-~~~~~h~~~~~~~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 197 WNSYILSSGSRS-----GHIHHHDVRVAEHHV-ATLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGG 265 (420)
T ss_dssp EETTEEEEEETT-----SEEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCCSSC
T ss_pred eCCCEEEEEeCC-----CceeEeeecccceee-EEecccccceeeeeecCCCCeeeeeecc-----ccceEEeecccccc
Confidence 577777777753 456777766543221 111111111112222 55666666654 356677766543
Q ss_pred EEEcCCCCCCCcceEEEEE---CCEEEEEe-cCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEc
Q psy17309 630 WTLIEPMRHRRSGVSCIAY---HECIYVIG-GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIG 703 (824)
Q Consensus 630 W~~~~~~p~~r~~~~~~~~---~~~iyv~G-G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 703 (824)
+..+...........+... +..+++.| |.. -..|.+||..+.+-...-.. .....+++.. ++.+++.+
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~----D~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS----DRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT----TCEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTEEEEEE
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEEEeecC----CCEEEEEeCCccccceeecc--ccceeeeeecCCCCeEEEEE
Confidence 1111111111111122222 44555554 432 24688899887654332111 1111222222 45666655
Q ss_pred cCCCCceeeEEEEEECCCC
Q psy17309 704 GFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 704 G~~~~~~~~~v~~yd~~~~ 722 (824)
|...+ .+.+||..+.
T Consensus 340 g~~d~----~I~iwd~~~~ 354 (420)
T 4gga_A 340 GFAQN----QLVIWKYPTM 354 (420)
T ss_dssp CTTTC----CEEEEETTTC
T ss_pred ecCCC----EEEEEECCCC
Confidence 54332 5788887764
No 142
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.27 E-value=0.62 Score=48.49 Aligned_cols=193 Identities=11% Similarity=0.032 Sum_probs=97.2
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce-EEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
++.+++.|+.+ ..+..||..+.+-... +...... .+++.. ++..++.|+.+ ..+.+||..+.+-..
T Consensus 43 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 43 EGDLLFSCSKD-----SSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVA 110 (369)
T ss_dssp TSCEEEEEESS-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 45566667644 3588899887654322 2111111 223332 56677777643 568899998876543
Q ss_pred ecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCe----EEEcCCCC-------CCCcceEEEEE--CCE
Q psy17309 586 IAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQ----WTLIEPMR-------HRRSGVSCIAY--HEC 651 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~p-------~~r~~~~~~~~--~~~ 651 (824)
.-..+. .-.+++.. ++..++.++.+.......+..||..+.. +......+ .......++.+ +++
T Consensus 111 ~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 111 TWKSPV--PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEECSS--CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred EeecCC--CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 322221 11222222 5556666554422223467777765432 22211111 01012223333 566
Q ss_pred EEEEecCCCCCccceEEEEeCCCC-CEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEe
Q psy17309 652 IYVIGGFNGMSRMCNGEKYNPVTK-TWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 652 iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
.++.|+.+ ..+.+||+.+. +-... +.........+.+ ++..++.|+.++ .+.+||..+.+-..
T Consensus 189 ~l~~~~~d-----g~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 189 YIIAGHKD-----GKISKYDVSNNYEYVDS--IDLHEKSISDMQFSPDLTYFITSSRDT-----NSFLVDVSTLQVLK 254 (369)
T ss_dssp EEEEEETT-----SEEEEEETTTTTEEEEE--EECCSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEEE
T ss_pred EEEEEcCC-----CEEEEEECCCCcEeEEE--EecCCCceeEEEECCCCCEEEEecCCc-----eEEEEECCCCceee
Confidence 77777653 47889998863 22111 1111112222333 677777777654 68889988765443
No 143
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.26 E-value=0.41 Score=50.22 Aligned_cols=192 Identities=8% Similarity=0.040 Sum_probs=97.9
Q ss_pred EEEECCEEEEEeecCCCcccceEEEEECCCCceEEecc--CCC-CcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCC
Q psy17309 504 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP--MNF-KRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYT 579 (824)
Q Consensus 504 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~--~~~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~ 579 (824)
++...+..++.|+.+ ..+..||..+++-..... +.. ...-.+++.. ++..++.|+.+ ..+.++|+.
T Consensus 88 ~~~s~d~~l~~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-----~~i~iwd~~ 157 (344)
T 4gqb_B 88 LTWVGERGILVASDS-----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-----ICIKVWDLA 157 (344)
T ss_dssp EEEETTTEEEEEETT-----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETT
T ss_pred EEEeCCCeEEEEECC-----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECC
Confidence 444444445566644 458888988765321111 101 1111223332 67777878754 458889988
Q ss_pred CCcEEeecCCCcccCceEEEEE---CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE---CCEEE
Q psy17309 580 ENQWSLIAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIY 653 (824)
Q Consensus 580 t~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iy 653 (824)
+++-. ..+.........+.+ +..+++.|+.+ ..+..||..+.+-...-..........++.+ +++++
T Consensus 158 ~~~~~--~~~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 158 QQVVL--SSYRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp TTEEE--EEECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEE
T ss_pred CCcEE--EEEcCcCCceEEEEecCCCCCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcce
Confidence 87532 222211112222222 33577777765 4688899887654332111111122222332 56788
Q ss_pred EEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--C-CEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 654 VIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--D-DMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
+.|+.+ ..|.+||..+.+ .+..+.........+.+ + .++++.|+.++ .+.+||..+.+-
T Consensus 231 ~sg~~d-----g~v~~wd~~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~-----~i~vwd~~~~~~ 292 (344)
T 4gqb_B 231 VFGDEN-----GTVSLVDTKSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC-----SLAVLDSSLSEL 292 (344)
T ss_dssp EEEETT-----SEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTS-----CEEEECTTCCEE
T ss_pred EEeccC-----CcEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC-----eEEEEECCCCcE
Confidence 888754 468889987643 12112111122223333 3 36777787765 578889887653
No 144
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.25 E-value=1.6 Score=47.47 Aligned_cols=238 Identities=5% Similarity=-0.078 Sum_probs=115.8
Q ss_pred EEEEEccCCCCCCCceEEEEECC--CCcEEE-cccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCce
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTR--ADRWVK-IDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 536 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~--~~~W~~-~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 536 (824)
.+++.|+.. ..+..||.. +.+... +.... .+..-.+++.. ++..++.|+.+ ..++.+|..+...
T Consensus 116 ~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 116 RLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFC--FSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINSIPE 183 (450)
T ss_dssp EEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEE--CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCCC
T ss_pred EEEEEECCC-----CeEEEEECcCCCCceeeeeeccc--CCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCCccc
Confidence 445666532 457778876 443322 11000 11112233333 55666667643 4578888766543
Q ss_pred EE--eccCCCC-cceEEEE-EEC---CEEEEEecccCCCCCCeEEEEeCCCCcEEee-cCCCcccCceEEEEECCEEEEE
Q psy17309 537 KE--IAPMNFK-RCYVSTA-VHQ---DVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTLQGKIYIT 608 (824)
Q Consensus 537 ~~--~~~~~~~-r~~~~~~-~~~---~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~r~~~~~~~~~~~lyv~ 608 (824)
.. ...+... ..-.+++ .-+ +.+++.|+.+ ..+.+||+.+...... ..-........+.. ++++++.
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEE
Confidence 21 1111111 1112233 335 7777888754 4688888876653221 10011111111222 7777778
Q ss_pred cccCCCCcCCceEEEeCCCCeEEEcCCC------------------------CCCCcceEEEEE-CCEEEEEecCCCCCc
Q psy17309 609 GGFNGHNCLNSCEVYDPECNQWTLIEPM------------------------RHRRSGVSCIAY-HECIYVIGGFNGMSR 663 (824)
Q Consensus 609 GG~~~~~~~~~v~~yd~~~~~W~~~~~~------------------------p~~r~~~~~~~~-~~~iyv~GG~~~~~~ 663 (824)
|+.+ ..+..||..+.+....-.. +.......++.. +++.+++++..
T Consensus 258 ~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~---- 328 (450)
T 2vdu_B 258 AGGD-----DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA---- 328 (450)
T ss_dssp EESS-----SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT----
T ss_pred EeCC-----CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC----
Confidence 8754 4688899887764322110 001111122222 34444444411
Q ss_pred cceEEEEeC--C-CCCEEECCCCCCCCcceEEEEECCEEEEEccCCCC----ceeeEEEEEECCCCcEE
Q psy17309 664 MCNGEKYNP--V-TKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGV----TTIYHVECYDEKTDEWY 725 (824)
Q Consensus 664 ~~~v~~yd~--~-~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~----~~~~~v~~yd~~~~~W~ 725 (824)
...+.+||. . ..++..+..++....-.+++...+.+++..+.... ...-.++.++.+++.|+
T Consensus 329 d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 329 TKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp CSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred CCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 256788887 3 34555554443333333445556777777654321 22236777888888885
No 145
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.24 E-value=0.39 Score=48.98 Aligned_cols=188 Identities=13% Similarity=0.102 Sum_probs=93.5
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce-EEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
++..++.|+.+ ..+..||..+.+...+..+...... .+++.. ++.+++.|+.+ ..+.++|..+..|
T Consensus 20 ~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 20 YGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVMIWKEENGRW 89 (297)
T ss_dssp TSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TEEEEEEBSSSCB
T ss_pred CCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CEEEEEEcCCCce
Confidence 45666777754 3577888765433222222211111 223322 26777777754 5688899988877
Q ss_pred EeecCCCcccCceEEEEE--C--CEEEEEcccCCCCcCCceEEEeCCCCe-EEEcCCCCCCCcceEEEEE----------
Q psy17309 584 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRHRRSGVSCIAY---------- 648 (824)
Q Consensus 584 ~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~---------- 648 (824)
..+..+.........+.. + +.+++.|+.+ ..+..||..+.. +... .+.........+..
T Consensus 90 ~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 90 SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSSSCBCCE-EEECCSSCEEEEEECCCC------
T ss_pred EEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCCCceeee-eeecccCccceEeecCCccccccc
Confidence 554333222222223333 2 5667777755 356777776542 2100 00000011111111
Q ss_pred -----CCEEEEEecCCCCCccceEEEEeCCCC--CEEECCCCCCCCcceEEEEE--C---CEEEEEccCCCCceeeEEEE
Q psy17309 649 -----HECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVI--D---DMIFAIGGFNGVTTIYHVEC 716 (824)
Q Consensus 649 -----~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~~ 716 (824)
++++++.|+.+ ..+..||..+. .|.....+.........+.+ + +.+++.|+.++ .+.+
T Consensus 164 ~~~~~~~~~l~sgs~D-----~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~-----~v~i 233 (297)
T 2pm7_B 164 HNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR-----TCII 233 (297)
T ss_dssp ------CCEEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEE
T ss_pred CCCCCCcceEEEEcCC-----CcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC-----cEEE
Confidence 24577778764 35666766543 35444333322222233333 2 47888888765 4667
Q ss_pred EECCC
Q psy17309 717 YDEKT 721 (824)
Q Consensus 717 yd~~~ 721 (824)
||+++
T Consensus 234 Wd~~~ 238 (297)
T 2pm7_B 234 WTQDN 238 (297)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 77655
No 146
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.57 Score=49.93 Aligned_cols=146 Identities=8% Similarity=0.007 Sum_probs=74.7
Q ss_pred EEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 505 AVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 505 ~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
+...+..++.|+.+ ..+..||..+.+-...-... ...-.+++.. ++..++.|+.+ ..+.+||..+.+.
T Consensus 213 ~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 213 EWVDDDKFVIPGPK-----GAIFVYQITEKTPTGKLIGH-HGPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNS 281 (425)
T ss_dssp EEEETTEEEEECGG-----GCEEEEETTCSSCSEEECCC-SSCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSC
T ss_pred EEcCCCEEEEEcCC-----CeEEEEEcCCCceeeeeccC-CCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCcc
Confidence 33333446666543 46889998876432111111 1112233333 56677777643 4578888876542
Q ss_pred Ee-ecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCC
Q psy17309 584 SL-IAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 659 (824)
Q Consensus 584 ~~-~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 659 (824)
.. +.. ....-.+++.. ++ +++.|+.+ ..+..||..+.+-...-. ........+.+ ++.+++.|+.+
T Consensus 282 ~~~~~~--~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 282 QNCFYG--HSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALSI--VDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp SEEECC--CSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEEE--CTTCCEEEEEECTTSSEEEEEETT
T ss_pred ceEecC--CCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEecc--cCCccEEEEEEcCCCCEEEEEECC
Confidence 11 111 11122233333 55 66666654 468899988765332221 11122223333 57777777754
Q ss_pred CCCccceEEEEeCCCCC
Q psy17309 660 GMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~~ 676 (824)
..+.+||..+..
T Consensus 352 -----g~i~i~~~~~~~ 363 (425)
T 1r5m_A 352 -----GQVNVYDLKKLN 363 (425)
T ss_dssp -----SCEEEEECHHHH
T ss_pred -----CeEEEEECCCCc
Confidence 467788876543
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.21 E-value=1.6 Score=50.63 Aligned_cols=191 Identities=7% Similarity=-0.058 Sum_probs=100.8
Q ss_pred cceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCC-cEEeecCCCccc----Cc
Q psy17309 523 YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVER----SD 595 (824)
Q Consensus 523 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~~~~~p~~r----~~ 595 (824)
...++.+|..+++-..+............+.. +++..+++..+.......++.+|+.+. ....+....... ..
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 35789999998876655432222222222222 565445544443333457899999988 666553211111 01
Q ss_pred eEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CC-EEEEEecCCCCCccceEEEE
Q psy17309 596 ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HE-CIYVIGGFNGMSRMCNGEKY 670 (824)
Q Consensus 596 ~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~y 670 (824)
.....- +|++++.+..++ ...++.+|........+..-... ......+ ++ .||+.+..+ ......++.+
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~~~~--v~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~ 387 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTKGEWE--VTNFAGFDPKGTRLYFESTEA-SPLERHFYCI 387 (706)
T ss_dssp CCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCCSSSC--EEEEEEECTTSSEEEEEESSS-CTTCBEEEEE
T ss_pred CceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCCCCeE--EEeeeEEcCCCCEEEEEecCC-CCceEEEEEE
Confidence 112233 677666554433 35678888777777766432211 1121233 44 566655432 2123578999
Q ss_pred eCCCCCEEECCCCCCCCcceEEEE-ECCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 671 NPVTKTWSQVPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 671 d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
|..+.+.+.+.. ....++++. -+++.+++...+.. .-..++++|.++++
T Consensus 388 d~~~~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~~-~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 388 DIKGGKTKDLTP---ESGMHRTQLSPDGSAIIDIFQSPT-VPRKVTVTNIGKGS 437 (706)
T ss_dssp ETTCCCCEESCC---SSSEEEEEECTTSSEEEEEEECSS-CSCEEEEEESSSCE
T ss_pred EcCCCCceeccC---CCceEEEEECCCCCEEEEEecCCC-CCcEEEEEECCCCe
Confidence 998877666652 111222222 25665555433221 22468889988876
No 148
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.16 E-value=0.95 Score=47.87 Aligned_cols=193 Identities=13% Similarity=0.125 Sum_probs=92.6
Q ss_pred EEEEEccCCCCCCCceEEEEECCCCc------EEEcccCCCCC-CCceeEEEEE-----CCEE-EEEeecCCCcccceEE
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTRADR------WVKIDQVDPMG-PRAYHGTAVI-----GYNI-YVIGGFDGNEYYNSCR 527 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~~~~------W~~~~~~~~~~-~r~~~~~~~~-----~~~l-yv~GG~~~~~~~~~~~ 527 (824)
..++.|+.. ..+..||..+.+ +..+....... ...-.+++.. ++.. ++.|+.+ ..+.
T Consensus 82 ~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~ 151 (397)
T 1sq9_A 82 CLVATTSFS-----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTY 151 (397)
T ss_dssp EEEEEEETT-----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEE
T ss_pred cEEEEEcCC-----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEE
Confidence 456666542 357778776665 55543221100 1222333333 3455 7777754 3477
Q ss_pred EEECCC------Cc---eE---Eecc-----CCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCC
Q psy17309 528 CFNAVT------KV---WK---EIAP-----MNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM 589 (824)
Q Consensus 528 ~yd~~~------~~---W~---~~~~-----~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~ 589 (824)
.||..+ .+ |. .+.. ......-.+++.. ++ +++.|+.+ ..+..||..+.+-...-..
T Consensus 152 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 152 IWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFES 225 (397)
T ss_dssp EEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEEC
T ss_pred EEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEec
Confidence 777665 22 21 1110 0011112233333 45 66666643 5688999987654322111
Q ss_pred -Ccc---cCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCC-----------CCcceEEEEE--CC
Q psy17309 590 -NVE---RSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH-----------RRSGVSCIAY--HE 650 (824)
Q Consensus 590 -p~~---r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-----------~r~~~~~~~~--~~ 650 (824)
+.. ......+.+ ++.+++.|+.++ ....+..||..+.+-...-..+. .......+.+ ++
T Consensus 226 ~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 226 QHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp CC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred cccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 001 122222222 566777776541 11468889987764322111100 1222223333 57
Q ss_pred EEEEEecCCCCCccceEEEEeCCCCC
Q psy17309 651 CIYVIGGFNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 651 ~iyv~GG~~~~~~~~~v~~yd~~~~~ 676 (824)
++++.|+.+ ..+.+||..+.+
T Consensus 304 ~~l~~~~~d-----g~i~iwd~~~~~ 324 (397)
T 1sq9_A 304 ETLCSAGWD-----GKLRFWDVKTKE 324 (397)
T ss_dssp SEEEEEETT-----SEEEEEETTTTE
T ss_pred CEEEEEeCC-----CeEEEEEcCCCc
Confidence 777777753 468899987664
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.15 E-value=0.92 Score=52.66 Aligned_cols=152 Identities=11% Similarity=-0.001 Sum_probs=81.3
Q ss_pred CeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCC-eEEEcCCCCCCC----cce
Q psy17309 571 NSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRR----SGV 643 (824)
Q Consensus 571 ~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r----~~~ 643 (824)
..++++|+.+.+-..+............+.. +++..+++..+.......+..+|+.+. ....+....... ...
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 5689999988876555432111112222222 565444544443333457899999988 666553111110 011
Q ss_pred EEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--C-CEEEEEccCCCCceeeEEEEEE
Q psy17309 644 SCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--D-DMIFAIGGFNGVTTIYHVECYD 718 (824)
Q Consensus 644 ~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd 718 (824)
.+..- ++++++.+..++ ...++.+|........+..-.... .....+ + +.|++.+..++ .....++.+|
T Consensus 315 ~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d 388 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEAS-PLERHFYCID 388 (706)
T ss_dssp CEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSC-TTCBEEEEEE
T ss_pred ceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCC-CceEEEEEEE
Confidence 12223 677666654432 357888887777777764322111 121233 3 45666654422 2234789999
Q ss_pred CCCCcEEecc
Q psy17309 719 EKTDEWYEAT 728 (824)
Q Consensus 719 ~~~~~W~~~~ 728 (824)
.++...+.+.
T Consensus 389 ~~~~~~~~l~ 398 (706)
T 2z3z_A 389 IKGGKTKDLT 398 (706)
T ss_dssp TTCCCCEESC
T ss_pred cCCCCceecc
Confidence 9887766654
No 150
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.10 E-value=1.2 Score=46.73 Aligned_cols=175 Identities=11% Similarity=0.192 Sum_probs=91.3
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCCcEE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTENQWS 584 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 584 (824)
++..++.|+.+ ..+..||..+++-...-.-.... -.++... ++..++.|+.+ ..+..||+.+.+..
T Consensus 165 ~~~~l~t~s~D-----~~v~lwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~g~~l~sgs~D-----g~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 165 SDMQILTASGD-----GTCALWDVESGQLLQSFHGHGAD-VLCLDLAPSETGNTFVSGGCD-----KKAMVWDMRSGQCV 233 (354)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEEEECCSSC-EEEEEECCCSSCCEEEEEETT-----SCEEEEETTTCCEE
T ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEEEcCCCCC-eEEEEEEeCCCCCEEEEEeCC-----CeEEEEECCCCcEE
Confidence 34455566543 46888999887643211111111 1122221 35677778754 45888998887653
Q ss_pred eecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCC
Q psy17309 585 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNG 660 (824)
Q Consensus 585 ~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 660 (824)
.. +........++.+ ++..++.|+.+ ..+..||..++.-...-...........+.+ ++.+++.|+.+
T Consensus 234 ~~--~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d- 305 (354)
T 2pbi_B 234 QA--FETHESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND- 305 (354)
T ss_dssp EE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-
T ss_pred EE--ecCCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-
Confidence 32 1111112222233 56777788765 4688899887653322221222223333333 57777777754
Q ss_pred CCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCC
Q psy17309 661 MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 707 (824)
Q Consensus 661 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 707 (824)
..+.+||..+.+=. ..+.........+.+ +++.++.|+.++
T Consensus 306 ----~~i~vwd~~~~~~~--~~l~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 306 ----YTINVWDVLKGSRV--SILFGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp ----SCEEEEETTTCSEE--EEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ----CcEEEEECCCCceE--EEEECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 46888998665421 111111122222333 677888887765
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.07 E-value=0.83 Score=46.97 Aligned_cols=188 Identities=10% Similarity=0.006 Sum_probs=97.7
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CC-EEEEEecccCCCCCCeEEEEeCCCCcE--
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QD-VIYAMGGYNGQRRQNSVEKYNYTENQW-- 583 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W-- 583 (824)
.+.+|+.++. ...+..||+.+++.......+. ....++.. ++ .+|+.+.. ...++++|+.+.+.
T Consensus 9 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~-----~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 9 SNFGIVVEQH-----LRRISFFSTDTLEILNQITLGY--DFVDTAITSDCSNVVVTSDF-----CQTLVQIETQLEPPKV 76 (331)
T ss_dssp CCEEEEEEGG-----GTEEEEEETTTCCEEEEEECCC--CEEEEEECSSSCEEEEEEST-----TCEEEEEECSSSSCEE
T ss_pred CCEEEEEecC-----CCeEEEEeCcccceeeeEEccC--CcceEEEcCCCCEEEEEeCC-----CCeEEEEECCCCceeE
Confidence 4677877753 3579999999998765444332 22233332 44 57777652 24899999988774
Q ss_pred EeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEecCC
Q psy17309 584 SLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFN 659 (824)
Q Consensus 584 ~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~ 659 (824)
..+.....++ ++++.. +..+| .+...+ ....+..||+.+++....- +.....+.++.. ++ .+|+.+...
T Consensus 77 ~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 77 VAIQEGQSSM--ADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTI--PIPYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp EEEEECSSCC--CCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEE--ECCTTEEEEEECTTSSCEEEEEETT
T ss_pred EecccCCCCc--cceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEE--ECCCCccceEECCCCCEEEEEecCC
Confidence 2222222222 213333 34566 332211 1137999999888754432 222222334433 44 488776532
Q ss_pred CCCccce-EEEEeCCCCC-EEEC--CCCCCCCcceEEEEE-CC-EEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 660 GMSRMCN-GEKYNPVTKT-WSQV--PDMYNPRSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 660 ~~~~~~~-v~~yd~~~~~-W~~~--~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
.. +.+|+...+. -... ..++.......++.. ++ .+|+.+..+ ..+.+||+.+.+.
T Consensus 150 -----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 150 -----ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPEN 210 (331)
T ss_dssp -----TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTS
T ss_pred -----CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCcc
Confidence 34 6666654321 1110 011111111222222 45 477776433 2688999987765
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.06 E-value=1 Score=46.75 Aligned_cols=229 Identities=9% Similarity=0.038 Sum_probs=108.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECC-CCceEEeccCCC------C
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAV-TKVWKEIAPMNF------K 545 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~~~------~ 545 (824)
..+..||..+.++..+...... ...-..+++. +..||+.+.. ...+..||.. +++...+...+. +
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~-~~~p~~~a~spdg~~l~~~~~~-----~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAP-GTPPAYVAVDEARQLVYSANYH-----KGTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE-SCCCSEEEEETTTTEEEEEETT-----TTEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred ceEEEEEecCCcEEEeeeeecC-CCCCEEEEECCCCCEEEEEeCC-----CCEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 4688888877776654321111 1112234444 4456666521 2457777764 334443322211 1
Q ss_pred c----ceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCC-CCcEEeecC--CCcccCceEEEEE-CC-EEEEEcccCCCC
Q psy17309 546 R----CYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYT-ENQWSLIAP--MNVERSDASATTL-QG-KIYITGGFNGHN 615 (824)
Q Consensus 546 r----~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~-t~~W~~~~~--~p~~r~~~~~~~~-~~-~lyv~GG~~~~~ 615 (824)
| .-+.++.. ++++|+.+.. .+.+.+||+. +.+...+.. .+....-..++.. ++ .+|+.+..+
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~~-----~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~--- 208 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDLG-----SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS--- 208 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEETT-----TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT---
T ss_pred cccCCCceEEEECCCCcEEEEeCC-----CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC---
Confidence 1 12233332 6677776532 2578889887 565554432 2211111122322 45 478765432
Q ss_pred cCCceEEEe--CCCCeEEEcC---CCCCC---CcceEEEEE--CC-EEEEEecCCCCCccceEEEEeCCC-CCEEECCCC
Q psy17309 616 CLNSCEVYD--PECNQWTLIE---PMRHR---RSGVSCIAY--HE-CIYVIGGFNGMSRMCNGEKYNPVT-KTWSQVPDM 683 (824)
Q Consensus 616 ~~~~v~~yd--~~~~~W~~~~---~~p~~---r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~ 683 (824)
+.+.+|+ ..+++++.+. ..+.. ......+.+ ++ .||+.+.. .+.+.+||... .+++.+..+
T Consensus 209 --~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~-----~~~v~v~~~~~~g~~~~~~~~ 281 (347)
T 3hfq_A 209 --SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG-----YNTLAVFAVTADGHLTLIQQI 281 (347)
T ss_dssp --TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET-----TTEEEEEEECGGGCEEEEEEE
T ss_pred --CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC-----CCEEEEEEECCCCcEEEeEEE
Confidence 3445554 4457765443 23321 122333333 45 47776643 25678888753 355555433
Q ss_pred CCCCcceEEEEE--CCE-EEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 684 YNPRSNFAIEVI--DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 684 p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
+........+.+ +++ ||+.+..++ .-.++..|+++.+-+.+
T Consensus 282 ~~~~~~~~~~~~spdg~~l~v~~~~~~---~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 282 STEGDFPRDFDLDPTEAFVVVVNQNTD---NATLYARDLTSGKLSLL 325 (347)
T ss_dssp ECSSSCCCEEEECTTSSEEEEEETTTT---EEEEEEECTTTCCEEEE
T ss_pred ecCCCCcCeEEECCCCCEEEEEEcCCC---cEEEEEEeCCCCeEEec
Confidence 331111122333 454 655543222 12344448888877765
No 153
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.05 E-value=0.53 Score=50.61 Aligned_cols=184 Identities=9% Similarity=0.104 Sum_probs=96.0
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++.+++.|+.+ ..+..||..+++-...-..... .-.+++.. ++.+++.||.+ ..+.+||..+..- +
T Consensus 119 ~~~~l~s~s~D-----g~i~vwd~~~~~~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~D-----~~i~iwd~~~~~~--~ 185 (410)
T 1vyh_C 119 VFSVMVSASED-----ATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSAD-----MTIKLWDFQGFEC--I 185 (410)
T ss_dssp SSSEEEEEESS-----SCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETT-----SCCCEEETTSSCE--E
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEeccCC-cEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCce--e
Confidence 45567777754 3588899887754322111111 11222222 56778888755 3456778766542 2
Q ss_pred cCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCC
Q psy17309 587 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 662 (824)
Q Consensus 587 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 662 (824)
..+........++.+ ++..++.|+.+ ..+..||..+..-... +.........+.. ++.+++.|+.+
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D--- 255 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSND--- 255 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETT---
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCC---
Confidence 222222222223333 56667777765 4688899887653221 1111222222333 57778888764
Q ss_pred ccceEEEEeCCCCCEEECCCCCCCCcceEEEEE----------------------CCEEEEEccCCCCceeeEEEEEECC
Q psy17309 663 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI----------------------DDMIFAIGGFNGVTTIYHVECYDEK 720 (824)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------------------~~~i~v~GG~~~~~~~~~v~~yd~~ 720 (824)
..+.+||..+..-... +........++.+ ++.+++.|+.++ .+.+||..
T Consensus 256 --~~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~-----~i~iwd~~ 326 (410)
T 1vyh_C 256 --QTVRVWVVATKECKAE--LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK-----TIKMWDVS 326 (410)
T ss_dssp --SCEEEEETTTCCEEEE--ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS-----EEEEEETT
T ss_pred --CeEEEEECCCCceeeE--ecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC-----eEEEEECC
Confidence 4577888876654321 1000111111111 256778887665 68889987
Q ss_pred CCc
Q psy17309 721 TDE 723 (824)
Q Consensus 721 ~~~ 723 (824)
+..
T Consensus 327 ~~~ 329 (410)
T 1vyh_C 327 TGM 329 (410)
T ss_dssp TTE
T ss_pred CCc
Confidence 753
No 154
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.04 E-value=2.4 Score=48.58 Aligned_cols=193 Identities=11% Similarity=0.009 Sum_probs=106.8
Q ss_pred cceEEEEECCC------CceEEec-cCCCCcceEEEEEECCEEEEEecccCCC---CCCeEEEEeCC-CCcEEeecCCCc
Q psy17309 523 YNSCRCFNAVT------KVWKEIA-PMNFKRCYVSTAVHQDVIYAMGGYNGQR---RQNSVEKYNYT-ENQWSLIAPMNV 591 (824)
Q Consensus 523 ~~~~~~yd~~~------~~W~~~~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~-t~~W~~~~~~p~ 591 (824)
...++.+|..+ ++...+. .-.. ........-+|+..++...+... ....++++|.. +.++.....+..
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 36799999988 6666654 3221 11111222356555544433211 13579999998 563333222221
Q ss_pred c--cCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCc-------ceEEEEE-CCEEEEEecCCC
Q psy17309 592 E--RSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRS-------GVSCIAY-HECIYVIGGFNG 660 (824)
Q Consensus 592 ~--r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~-------~~~~~~~-~~~iyv~GG~~~ 660 (824)
. ......+.. +|++|+.+..++ ...++.+|+.+.+++.+.+...... ....+.. ++++++.+.. +
T Consensus 239 ~~~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~ 314 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G 314 (662)
T ss_dssp ETTBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S
T ss_pred CCCceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C
Confidence 1 111222222 677777765443 2478999998888988754322110 1123333 6788777654 2
Q ss_pred CCccceEEEEeCCCCCEEECCCCCCCCcceEE-EEECCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 661 MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI-EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 661 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
...++.+|+.+.+.+.+.... ....++ ..-++.+++..+... ....++.+|+++.+.+.+
T Consensus 315 ---~~~l~~~d~~~~~~~~l~~~~--~~~~~~~s~~~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 315 ---AAVLGILDPESGELVDAAGPW--TEWAATLTVSGTRAVGVAASPR--TAYEVVELDTVTGRARTI 375 (662)
T ss_dssp ---SCEEEEEETTTTEEEECCSSC--CEEEEEEEEETTEEEEEEEETT--EEEEEEEEETTTCCEEEE
T ss_pred ---ccEEEEEECCCCcEEEecCCC--CeEEEEEecCCCEEEEEEcCCC--CCCEEEEEECCCCceEEe
Confidence 457888899888777764321 111222 334667766654322 344789999988887765
No 155
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.04 E-value=0.3 Score=50.38 Aligned_cols=189 Identities=13% Similarity=0.087 Sum_probs=98.0
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce-EEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
++..++.|+.+ ..+..||..++....+..+...... .+++.. ++.+++.|+.+ ..+.++|+.+..|
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTW 93 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCC
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcc
Confidence 45566677654 4578888877654333333221111 223332 25677777754 4588899988777
Q ss_pred EeecCCCcccCce-EEEEE-C--CEEEEEcccCCCCcCCceEEEeCCCC-eEEEcCCCCCCCcceEEEEE----------
Q psy17309 584 SLIAPMNVERSDA-SATTL-Q--GKIYITGGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRRSGVSCIAY---------- 648 (824)
Q Consensus 584 ~~~~~~p~~r~~~-~~~~~-~--~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~---------- 648 (824)
..+..+....... +++.. + +.+++.|+.+ ..+..||..+. .|.....+........++..
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 5543332222222 22222 2 5677777765 35777777665 46543322111111111111
Q ss_pred ---------CCEEEEEecCCCCCccceEEEEeCCC-CCEEECCCCCCCCcceEEEEE--C----CEEEEEccCCCCceee
Q psy17309 649 ---------HECIYVIGGFNGMSRMCNGEKYNPVT-KTWSQVPDMYNPRSNFAIEVI--D----DMIFAIGGFNGVTTIY 712 (824)
Q Consensus 649 ---------~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~----~~i~v~GG~~~~~~~~ 712 (824)
.++.++.||.+ ..+..+|... ..|..+..+.........+.+ + +.+++.|+.++
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~----- 238 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCD-----NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG----- 238 (316)
T ss_dssp --CCSCCCCCCCBEECCBTT-----SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC-----
T ss_pred ccccccCccccceEEEecCC-----CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC-----
Confidence 13566666654 3455667653 457665544332222223333 2 26788888765
Q ss_pred EEEEEECCC
Q psy17309 713 HVECYDEKT 721 (824)
Q Consensus 713 ~v~~yd~~~ 721 (824)
.+.+||.++
T Consensus 239 ~v~iw~~~~ 247 (316)
T 3bg1_A 239 RVFIWTCDD 247 (316)
T ss_dssp EEEEEECSS
T ss_pred eEEEEEccC
Confidence 577888765
No 156
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.98 E-value=1.3 Score=45.00 Aligned_cols=214 Identities=10% Similarity=0.002 Sum_probs=112.0
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
+.++++.. ....++.||+.+.+...+... ..-.+++.. ++.+++.. .+.+++||+.+++++.
T Consensus 25 ~~l~~~d~-----~~~~i~~~d~~~~~~~~~~~~-----~~~~~i~~~~dG~l~v~~-------~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 25 NSLLFVDI-----PAKKVCRWDSFTKQVQRVTMD-----APVSSVALRQSGGYVATI-------GTKFCALNWKEQSAVV 87 (297)
T ss_dssp TEEEEEET-----TTTEEEEEETTTCCEEEEECS-----SCEEEEEEBTTSSEEEEE-------TTEEEEEETTTTEEEE
T ss_pred CEEEEEEC-----CCCEEEEEECCCCcEEEEeCC-----CceEEEEECCCCCEEEEE-------CCeEEEEECCCCcEEE
Confidence 45555543 235789999988766543221 112233333 55666543 1579999999998887
Q ss_pred eccCCC--C--cceEEEEEECCEEEEEecccC------CCCCCeEEEEeCCCCcEEee-cCCCcccCceEEEEE-C-CEE
Q psy17309 539 IAPMNF--K--RCYVSTAVHQDVIYAMGGYNG------QRRQNSVEKYNYTENQWSLI-APMNVERSDASATTL-Q-GKI 605 (824)
Q Consensus 539 ~~~~~~--~--r~~~~~~~~~~~iyv~GG~~~------~~~~~~~~~yd~~t~~W~~~-~~~p~~r~~~~~~~~-~-~~l 605 (824)
+...+. + +....++.-+|.+|+..-... ......++++|+.. +...+ ..+..+ .+++.. + ..+
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p---ngi~~spdg~~l 163 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS---NGLDWSLDHKIF 163 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE---EEEEECTTSCEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc---cceEEcCCCCEE
Confidence 654422 1 222222223678877431111 12335789998864 33332 222111 233333 3 468
Q ss_pred EEEcccCCCCcCCceEEEeC--CCCeEEE---cCCCCCCCcc-eEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCCEE
Q psy17309 606 YITGGFNGHNCLNSCEVYDP--ECNQWTL---IEPMRHRRSG-VSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWS 678 (824)
Q Consensus 606 yv~GG~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 678 (824)
|+.... .+.+++||. .++.... +..++..... .+++.- +|.||+.... ...|.+||+++.+-.
T Consensus 164 yv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~-----~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 164 YYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN-----GGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-----TTEEEEECTTTCCEE
T ss_pred EEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-----CCEEEEEcCCCceEE
Confidence 887543 256788875 5554421 1122211112 223332 6889987642 146999999877654
Q ss_pred ECCCCCCCCcceEEEEEC----CEEEEEccCC
Q psy17309 679 QVPDMYNPRSNFAIEVID----DMIFAIGGFN 706 (824)
Q Consensus 679 ~~~~~p~~r~~~~~~~~~----~~i~v~GG~~ 706 (824)
..-.+|. .....++++ +.|||.....
T Consensus 234 ~~i~~p~--~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 234 QTVKLPV--DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEECSS--SBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEECCC--CCceEEEEeCCCCCEEEEEcCCc
Confidence 4333332 233444553 4788886543
No 157
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.95 E-value=0.19 Score=54.63 Aligned_cols=187 Identities=8% Similarity=0.033 Sum_probs=98.5
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCC-CCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWS 584 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 584 (824)
++.+++.|+.++ .+..||..+..-..+-.+. ....-.+++.. ++.+++.|+.+ ..+.++|..++...
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-----GTTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----SCEEEEETTSCEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEeeccCCcee
Confidence 345777887654 4888898876543332221 11112233432 56677777754 35788899887765
Q ss_pred eecCCCccc-CceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEecCC
Q psy17309 585 LIAPMNVER-SDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFN 659 (824)
Q Consensus 585 ~~~~~p~~r-~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~ 659 (824)
.+....... ...+++.. ++.+++.|+.+ ..+..||..... +..+........++.+ +..+++.|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 543322221 22223333 67778888765 367888876543 2222222222333333 34577777754
Q ss_pred CCCccceEEEEeCCCCCEEEC-CCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 660 GMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
..+.+||..+.+-... ............+.+ ++..++.|+.++ .+.+||..+.
T Consensus 273 -----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~-----~i~iwd~~~~ 328 (435)
T 4e54_B 273 -----QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS-----EIRVYSASQW 328 (435)
T ss_dssp -----SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS-----CEEEEESSSS
T ss_pred -----ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC-----EEEEEECCCC
Confidence 3566788765432111 000000111112222 677788888765 5778887663
No 158
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.94 E-value=1.9 Score=41.13 Aligned_cols=142 Identities=11% Similarity=0.047 Sum_probs=81.7
Q ss_pred EEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEe--e----cCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceE
Q psy17309 550 STAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSL--I----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 621 (824)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~--~----~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~ 621 (824)
+++..+|.+|+|=| ..+|+++.....+.. + +.+|.. .. ++... ++++|+|-| +.++
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iD-Aa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPNR-ID-AAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCSS-CC-EEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCCC-cc-EEEEeccCCcEEEEcc-------CEEE
Confidence 34557999999987 568888766544321 1 345532 22 22222 689999977 4566
Q ss_pred EEeCCCCe---EEEcCC--CCCCCcceEEEE-E--CCEEEEEecCCCCCccceEEEEeCCCCCEEE---------CCCCC
Q psy17309 622 VYDPECNQ---WTLIEP--MRHRRSGVSCIA-Y--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ---------VPDMY 684 (824)
Q Consensus 622 ~yd~~~~~---W~~~~~--~p~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~---------~~~~p 684 (824)
+|+..+-. =..+.. +|..-...-+|. . ++++|+|-| +..++||..+++=.. .+.+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 77633211 122322 332111222333 2 489999988 578999987543110 01222
Q ss_pred CCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 685 NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 685 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
..--++...++++|++-|. ..|.||..+++
T Consensus 165 --~~iDaAf~~~g~~YfFkg~-------~y~rf~~~~~~ 194 (207)
T 1pex_A 165 --DKVDAVYEKNGYIYFFNGP-------IQFEYSIWSNR 194 (207)
T ss_dssp --SCCSEEEEETTEEEEEETT-------EEEEEETTTTE
T ss_pred --CCccEEEEcCCcEEEEECC-------EEEEEeCCccE
Confidence 2223444569999999764 68999987764
No 159
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.93 E-value=1.9 Score=44.52 Aligned_cols=204 Identities=14% Similarity=0.155 Sum_probs=107.0
Q ss_pred CCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEE
Q psy17309 483 RADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYA 560 (824)
Q Consensus 483 ~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv 560 (824)
...+|..+.... +.+-....++.. ++.+|+.|.. ..+++-+-.-.+|+.+.... +...++++.. ++.+|+
T Consensus 107 gG~tW~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~ 178 (327)
T 2xbg_A 107 GGQSWSQIPLDP-KLPGSPRLIKALGNGSAEMITNV------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVA 178 (327)
T ss_dssp TTSSCEECCCCT-TCSSCEEEEEEEETTEEEEEETT------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEE
T ss_pred CCCCceECcccc-CCCCCeEEEEEECCCCEEEEeCC------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEE
Confidence 356798864321 112223344443 6788887641 23555444456899886533 2233444444 566776
Q ss_pred EecccCCCCCCeEEEE-eCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCC-CCeEEEcCC--
Q psy17309 561 MGGYNGQRRQNSVEKY-NYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPE-CNQWTLIEP-- 635 (824)
Q Consensus 561 ~GG~~~~~~~~~~~~y-d~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~-- 635 (824)
+|- . ..+++- |....+|+.+.. +.+...+.++.. ++.+|+.+.. + .+...+.. ..+|+.+..
T Consensus 179 ~g~-~-----G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~-G-----~~~~s~~D~G~tW~~~~~~~ 245 (327)
T 2xbg_A 179 VSS-R-----GSFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNG-G-----KIAFSDPDNSENWGELLSPL 245 (327)
T ss_dssp EET-T-----SSEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETT-T-----EEEEEETTEEEEECCCBCTT
T ss_pred EEC-C-----CcEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCC-c-----eEEEecCCCCCeeEeccCCc
Confidence 653 1 234443 333578998843 333444444433 6788877631 1 24444323 457987753
Q ss_pred CCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCCEEECCC-CCCCCcceEEEEE-CCEEEEEccCCCCceee
Q psy17309 636 MRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD-MYNPRSNFAIEVI-DDMIFAIGGFNGVTTIY 712 (824)
Q Consensus 636 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~ 712 (824)
++.....++++.. ++.+|+.|+. ..+++-.-...+|+.+.. .+.+...+.++.. +++++++|. ++
T Consensus 246 ~~~~~~~~~v~~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G----- 313 (327)
T 2xbg_A 246 RRNSVGFLDLAYRTPNEVWLAGGA------GALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQ-KG----- 313 (327)
T ss_dssp SSCCSCEEEEEESSSSCEEEEEST------TCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECS-TT-----
T ss_pred ccCCcceEEEEecCCCEEEEEeCC------CeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcC-Cc-----
Confidence 3332223333333 5789998863 234444334679998863 2223333444443 667666653 33
Q ss_pred EEEEEEC
Q psy17309 713 HVECYDE 719 (824)
Q Consensus 713 ~v~~yd~ 719 (824)
.++.++.
T Consensus 314 ~i~~~~~ 320 (327)
T 2xbg_A 314 ILLRYVT 320 (327)
T ss_dssp EEEEECC
T ss_pred eEEEEcC
Confidence 4666764
No 160
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.89 E-value=3.8 Score=41.65 Aligned_cols=213 Identities=8% Similarity=-0.070 Sum_probs=111.9
Q ss_pred eeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeC
Q psy17309 501 YHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNY 578 (824)
Q Consensus 501 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~ 578 (824)
..++++. ++.||+.--. ...++++|+.... ......+ ..-++++.. ++.+|+...... ...++++|+
T Consensus 34 pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~ 102 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHE-----VGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD---SIPVVSLVK 102 (306)
T ss_dssp EEEEEECTTSCEEEEETT-----TTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT---SCEEEEEEC
T ss_pred cceEEECCCCCEEEEeCC-----CCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC---cceEEEEcC
Confidence 3444443 5678887531 2568999988643 3222222 223344443 678888753211 135888999
Q ss_pred CCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCe---EEEcCC----CCC-C-CcceEEEEE
Q psy17309 579 TENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQ---WTLIEP----MRH-R-RSGVSCIAY 648 (824)
Q Consensus 579 ~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~----~p~-~-r~~~~~~~~ 648 (824)
.+.+.+.+...+..+...+.+.. ++.+|+... ....++++|+.+.. |..-+. .+. . ....+...-
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~d 177 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF 177 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcC
Confidence 88888877666655554444433 556777532 13578999987652 211110 111 1 112223333
Q ss_pred CCEEEEEecCCCCCccceEEEEeCCC-CCE---EECCCCCCCCcceEEEE-ECCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 649 HECIYVIGGFNGMSRMCNGEKYNPVT-KTW---SQVPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 649 ~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W---~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
++.||+.--. .+.|++||+.. .+. ..+..+..| .+++. -+|+||+.-..+ +.|.+||++ .+
T Consensus 178 g~~lyv~d~~-----~~~I~~~~~~~~g~~~~~~~~~~~~~P---~gi~vd~dG~l~va~~~~-----~~V~~~~~~-G~ 243 (306)
T 2p4o_A 178 GNFLYVSNTE-----KMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVEGNLYGATHIY-----NSVVRIAPD-RS 243 (306)
T ss_dssp TTEEEEEETT-----TTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTTCCEEEECBTT-----CCEEEECTT-CC
T ss_pred CCEEEEEeCC-----CCEEEEEEeCCCCCCCccEEEeccCCC---CCeEECCCCCEEEEeCCC-----CeEEEECCC-CC
Confidence 5679987542 36799999864 221 111111111 12332 267888885322 368899987 44
Q ss_pred EEeccCCCCCccceeEEEEc
Q psy17309 724 WYEATDMNIYRSALSACVIM 743 (824)
Q Consensus 724 W~~~~~~p~~r~~~~~~~~~ 743 (824)
...+...+.+.....++.+.
T Consensus 244 ~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 244 TTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp EEEEECGGGTCTTEEEEEEC
T ss_pred EEEEeecccccCCceEEEEe
Confidence 44333333332333444443
No 161
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.82 E-value=2 Score=43.37 Aligned_cols=188 Identities=10% Similarity=0.109 Sum_probs=89.6
Q ss_pred ECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCc-EE
Q psy17309 507 IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQ-WS 584 (824)
Q Consensus 507 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~ 584 (824)
.++..++.|+.+ ..+..||..+..-...-..... .-.+++.. ++..++.|+.+ ..+..++..... .+
T Consensus 27 ~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 27 VDDSKVASVSRD-----GTVRLWSKDDQWLGTVVYTGQG-FLNSVCYDSEKELLLFGGKD-----TMINGVPLFATSGED 95 (313)
T ss_dssp EETTEEEEEETT-----SEEEEEEESSSEEEEEEEECSS-CEEEEEEETTTTEEEEEETT-----SCEEEEETTCCTTSC
T ss_pred cCCCEEEEEEcC-----CcEEEEECCCCEEEEEeecCCc-cEEEEEECCCCCEEEEecCC-----CeEEEEEeeecCCCC
Confidence 445556677654 4688888877654332221111 12233333 56777777754 346666655432 11
Q ss_pred eecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCcc
Q psy17309 585 LIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 664 (824)
Q Consensus 585 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 664 (824)
.+..+............++..++.|+.+ ..+..||.......... ...+.........++..++.|+.+
T Consensus 96 ~~~~~~~~~~~i~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d----- 164 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSFQDGVVISGSWD-----KTAKVWKEGSLVYNLQA-HNASVWDAKVVSFSENKFLTASAD----- 164 (313)
T ss_dssp C-CEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTEEEEEEEC-CSSCEEEEEEEETTTTEEEEEETT-----
T ss_pred cccchhhcccCEEEEEecCCEEEEEeCC-----CCEEEEcCCcEEEeccc-CCCceeEEEEccCCCCEEEEEECC-----
Confidence 1222222222233333456666777655 35778883332222211 111111111122267777777754
Q ss_pred ceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 665 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 665 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
..+..||..... ..+..............-+++ ++.|+.++ .+.+||..+.+
T Consensus 165 ~~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg-----~i~i~d~~~~~ 216 (313)
T 3odt_A 165 KTIKLWQNDKVI-KTFSGIHNDVVRHLAVVDDGH-FISCSNDG-----LIKLVDMHTGD 216 (313)
T ss_dssp SCEEEEETTEEE-EEECSSCSSCEEEEEEEETTE-EEEEETTS-----EEEEEETTTCC
T ss_pred CCEEEEecCceE-EEEeccCcccEEEEEEcCCCe-EEEccCCC-----eEEEEECCchh
Confidence 457788833221 111111111111222233667 67777654 68889987654
No 162
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.78 E-value=3.8 Score=42.26 Aligned_cols=228 Identities=11% Similarity=0.053 Sum_probs=110.4
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 537 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 537 (824)
+.+++.|+.. ..+..||..+.+-...-.. ....-.+++.. ++.+++.|+.+ ..+..||..+++-.
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~ 151 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVG---HGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLV 151 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEES---CCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecC---CCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEE
Confidence 4566666642 4688888877654331110 11122233333 56677777754 35889999887643
Q ss_pred Ee-ccCCCCcce-EEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee-c-------------------------C
Q psy17309 538 EI-APMNFKRCY-VSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-A-------------------------P 588 (824)
Q Consensus 538 ~~-~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~-~-------------------------~ 588 (824)
.. ..+...... .+++.. ++..++.|+.+ ..+..||..+.+-... . .
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 152 AIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp EEECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred EEecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 32 211222222 223332 46677777753 4588888876532100 0 0
Q ss_pred CC-cccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeE------------EEcCCCC--CCCcceEEEEEC--CE
Q psy17309 589 MN-VERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW------------TLIEPMR--HRRSGVSCIAYH--EC 651 (824)
Q Consensus 589 ~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W------------~~~~~~p--~~r~~~~~~~~~--~~ 651 (824)
.. ....-.+++.. +.+++.|+.+ ..+..||..+..= ..+..+. .......+..-+ ++
T Consensus 227 ~~~~~~~v~~~~~~-~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 300 (366)
T 3k26_A 227 RDIHRNYVDCVRWL-GDLILSKSCE-----NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK 300 (366)
T ss_dssp CSSCSSCCCEEEEE-TTEEEEECSS-----SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS
T ss_pred ccCCcceEEEEEEc-CCEEEEEecC-----CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc
Confidence 00 11111122223 5566666654 3577777655321 1111111 001111112234 77
Q ss_pred EEEEecCCCCCccceEEEEeCCCCCEE--ECCCCCCC--CcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 652 IYVIGGFNGMSRMCNGEKYNPVTKTWS--QVPDMYNP--RSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 652 iyv~GG~~~~~~~~~v~~yd~~~~~W~--~~~~~p~~--r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
+++.|+.+ ..+.+||..+.+-. .+..+... ......+.+ ++++++.||.++ .+.+||+.+
T Consensus 301 ~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~ 366 (366)
T 3k26_A 301 MLALGNQV-----GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA-----SIWRWDRLR 366 (366)
T ss_dssp EEEEECTT-----SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-----EEEEEEC--
T ss_pred EEEEEecC-----CcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCC-----EEEEEEecC
Confidence 77888754 46888998775311 11111111 111222222 678888888765 678888753
No 163
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.78 E-value=1.4 Score=44.84 Aligned_cols=184 Identities=11% Similarity=0.117 Sum_probs=94.6
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++..++.|+.+ ..+..||..++.-...-....... .+++. .++..++.|+.+ ..+.+||..+.+-..
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~- 91 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQVTETPV-RAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV- 91 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCE-EEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE-
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEeeccCCcE-EEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEE-
Confidence 45566677654 468889988765332111111111 12222 356677777743 568889988765321
Q ss_pred cCCCcccCce-EEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEecCCCC
Q psy17309 587 APMNVERSDA-SATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGM 661 (824)
Q Consensus 587 ~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~ 661 (824)
.+....... +++.. ++.+++.|+.+ ..+..||..++. .....+........++.+ ++.+++.|+.+
T Consensus 92 -~~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-- 162 (304)
T 2ynn_A 92 -DFEAHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-- 162 (304)
T ss_dssp -EEECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETT--
T ss_pred -EEeCCCCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCC--
Confidence 111111112 22222 56677777765 467788876542 111111111222233333 45678888764
Q ss_pred CccceEEEEeCCCCC--EEECCCCCCCCcceEEEEE----CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 662 SRMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 662 ~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
..+..||..+.. ...... ..+ ....+.+ ++.+++.|+.++ .+.+||..+.+
T Consensus 163 ---~~v~iwd~~~~~~~~~~~~~--~~~-~v~~~~~~~~~~~~~l~s~s~D~-----~i~iWd~~~~~ 219 (304)
T 2ynn_A 163 ---RTVKVWSLGQSTPNFTLTTG--QER-GVNYVDYYPLPDKPYMITASDDL-----TIKIWDYQTKS 219 (304)
T ss_dssp ---SEEEEEETTCSSCSEEEECC--CTT-CEEEEEECCSTTCCEEEEEETTS-----EEEEEETTTTE
T ss_pred ---CeEEEEECCCCCccceeccC--CcC-cEEEEEEEEcCCCCEEEEEcCCC-----eEEEEeCCCCc
Confidence 468888876432 111110 111 1122222 556778887665 68889988764
No 164
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.76 E-value=1.8 Score=45.53 Aligned_cols=182 Identities=10% Similarity=0.066 Sum_probs=94.4
Q ss_pred EEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
.+++.|+.+ ..+..||..+.+....... ......-.+++.. ++.+++.|+.+ ..+..||..+.....
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 155 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQG-MGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQV 155 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECC-CSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeec-CCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEE
Confidence 456666532 3588899887766542111 1112233344444 34677777654 468899998876665
Q ss_pred eccCCCC-cceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCE-EEEEcccCC
Q psy17309 539 IAPMNFK-RCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGK-IYITGGFNG 613 (824)
Q Consensus 539 ~~~~~~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~ 613 (824)
+...... ..-.+++.. ++..++.|+.+ ..+..||+....-..+.. .......+.+ ++. +++.|+.+
T Consensus 156 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~d- 226 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKL---HKAKVTHAEFNPRCDWLMATSSVD- 226 (383)
T ss_dssp EECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEEC---SSSCEEEEEECSSCTTEEEEEETT-
T ss_pred EeccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEecc---CCCcEEEEEECCCCCCEEEEEeCC-
Confidence 5433221 112233333 56777777743 578889985443333321 1122222222 344 77777755
Q ss_pred CCcCCceEEEeCCC----CeEEEcCCCCCCCcceEEEEE---CCEEEEEecCCCCCccceEEEEeCCC
Q psy17309 614 HNCLNSCEVYDPEC----NQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGMSRMCNGEKYNPVT 674 (824)
Q Consensus 614 ~~~~~~v~~yd~~~----~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~ 674 (824)
..+..||..+ ......- .. ......+.+ ++..++.|+.+ ..+.+||..+
T Consensus 227 ----~~i~iwd~~~~~~~~~~~~~~--~~-~~~v~~~~~s~~~~~~l~~~~~d-----~~i~iwd~~~ 282 (383)
T 3ei3_B 227 ----ATVKLWDLRNIKDKNSYIAEM--PH-EKPVNAAYFNPTDSTKLLTTDQR-----NEIRVYSSYD 282 (383)
T ss_dssp ----SEEEEEEGGGCCSTTCEEEEE--EC-SSCEEEEEECTTTSCEEEEEESS-----SEEEEEETTB
T ss_pred ----CEEEEEeCCCCCcccceEEEe--cC-CCceEEEEEcCCCCCEEEEEcCC-----CcEEEEECCC
Confidence 3677888776 3322211 11 111222222 45666666643 4566777654
No 165
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.75 E-value=0.7 Score=47.11 Aligned_cols=195 Identities=7% Similarity=0.012 Sum_probs=100.0
Q ss_pred CCEEEEEeecC--CCcccceEEEEECCCCceEEeccC---CCCcceEEEEEE-C-CEEEEEecccCCCCCCeEEEEeCCC
Q psy17309 508 GYNIYVIGGFD--GNEYYNSCRCFNAVTKVWKEIAPM---NFKRCYVSTAVH-Q-DVIYAMGGYNGQRRQNSVEKYNYTE 580 (824)
Q Consensus 508 ~~~lyv~GG~~--~~~~~~~~~~yd~~~~~W~~~~~~---~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~t 580 (824)
++.+|+.++.. .......+++||+.++++..+... .....-.+++.. + +.+|+.+.. +.+.+||+.
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~- 100 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD- 100 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-
Confidence 56777771100 001125689999999888765431 011122334333 4 788887641 368999998
Q ss_pred CcEEee-cCCCcc---cCceEEEEE-CCEEEEEcccCC----------CCcCCceEEEeCCCCeEEEcC-CCCCCCcceE
Q psy17309 581 NQWSLI-APMNVE---RSDASATTL-QGKIYITGGFNG----------HNCLNSCEVYDPECNQWTLIE-PMRHRRSGVS 644 (824)
Q Consensus 581 ~~W~~~-~~~p~~---r~~~~~~~~-~~~lyv~GG~~~----------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~ 644 (824)
++...+ ...... ..-..++.- +|++|+...... ......+++||+. .+...+. .... ..+
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~~~ 176 (314)
T 1pjx_A 101 GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF---PNG 176 (314)
T ss_dssp SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS---EEE
T ss_pred CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC---cce
Confidence 777655 332211 112233332 678888754321 1112568899987 5554432 1111 123
Q ss_pred EEEE-----CC-EEEEEecCCCCCccceEEEEeCC-CCCEEE---CCCCCCCC-cceEEEEE--CCEEEEEccCCCCcee
Q psy17309 645 CIAY-----HE-CIYVIGGFNGMSRMCNGEKYNPV-TKTWSQ---VPDMYNPR-SNFAIEVI--DDMIFAIGGFNGVTTI 711 (824)
Q Consensus 645 ~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~---~~~~p~~r-~~~~~~~~--~~~i~v~GG~~~~~~~ 711 (824)
.+.. ++ .||+.... ...+++||+. +.+... ...++... .......+ ++.||+....+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~----- 246 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS----- 246 (314)
T ss_dssp EEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT-----
T ss_pred EEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC-----
Confidence 3333 34 57776542 2578888875 343321 11122111 11222233 67888874322
Q ss_pred eEEEEEECCCCc
Q psy17309 712 YHVECYDEKTDE 723 (824)
Q Consensus 712 ~~v~~yd~~~~~ 723 (824)
..+.+||+++.+
T Consensus 247 ~~i~~~d~~~g~ 258 (314)
T 1pjx_A 247 SHIEVFGPDGGQ 258 (314)
T ss_dssp TEEEEECTTCBS
T ss_pred CEEEEEcCCCCc
Confidence 268899998544
No 166
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.74 E-value=4.7 Score=43.54 Aligned_cols=212 Identities=13% Similarity=0.131 Sum_probs=116.8
Q ss_pred CCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceE-
Q psy17309 459 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWK- 537 (824)
Q Consensus 459 ~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~- 537 (824)
.+.+++|-| +..+.||..+++...-.-+.. +. .-++....+++|+|-| +..++||+.+++-.
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi--~~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAV--GN-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTS--CC-CSEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCC--Cc-cchheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 345566665 357889988876543211122 22 2345555789999998 67889998665321
Q ss_pred -----------EeccCC------------------CCcceE-EEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEe-
Q psy17309 538 -----------EIAPMN------------------FKRCYV-STAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSL- 585 (824)
Q Consensus 538 -----------~~~~~~------------------~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~- 585 (824)
.++... .+.... +++. .+|++|+|-| +..|++|.....+..
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCE
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCcc
Confidence 111100 011112 3333 4689999988 567888765533211
Q ss_pred -e----cCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC----------CCCCC--CcceEEEEE
Q psy17309 586 -I----APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE----------PMRHR--RSGVSCIAY 648 (824)
Q Consensus 586 -~----~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~----------~~p~~--r~~~~~~~~ 648 (824)
+ +.+|.. --++...++++|+|=| +.+++|+..++ .+..+ .+|.. ....-+|..
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~ 363 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFV 363 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEEC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEE
Confidence 1 234433 2334445889999976 45777875431 12221 12322 222333433
Q ss_pred ---CCEEEEEecCCCCCccceEEEEeCCCC---CEEECCCCCCCCcceEEEE------------ECCEEEEEccCCCCce
Q psy17309 649 ---HECIYVIGGFNGMSRMCNGEKYNPVTK---TWSQVPDMYNPRSNFAIEV------------IDDMIFAIGGFNGVTT 710 (824)
Q Consensus 649 ---~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~------------~~~~i~v~GG~~~~~~ 710 (824)
++++|++-| +..++||.... .+...+.+|. .. -++.. .++.+|++-|.
T Consensus 364 ~~~~~ktyfFkG-------~~ywryd~~~~Pr~i~~~~~gi~~-~v-dAaf~~~~~~~~~~~~~~~~~~yfF~g~----- 429 (460)
T 1qhu_A 364 CPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHE-KV-DGALCMEKPLGPNSCSTSGPNLYLIHGP----- 429 (460)
T ss_dssp CTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCS-CC-SEEEEESSCSSSCCSCSSSCEEEEEETT-----
T ss_pred eCCCCEEEEEEC-------CEEEEEECCCCccchhhhCCCCCC-Cc-CEEEecccccCcccccccCCeEEEEECC-----
Confidence 589999988 57889998632 1222222222 22 23333 45778988764
Q ss_pred eeEEEEEECC
Q psy17309 711 IYHVECYDEK 720 (824)
Q Consensus 711 ~~~v~~yd~~ 720 (824)
..+.||..
T Consensus 430 --~y~~~~~~ 437 (460)
T 1qhu_A 430 --NLYCYRHV 437 (460)
T ss_dssp --EEEEESSH
T ss_pred --EEEEEcCh
Confidence 56777754
No 167
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.74 E-value=3.9 Score=41.88 Aligned_cols=225 Identities=10% Similarity=0.047 Sum_probs=119.1
Q ss_pred ceEEEEECCCCcEEEcccCCCC----------------CCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCce
Q psy17309 475 DFVETYDTRADRWVKIDQVDPM----------------GPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 536 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~----------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 536 (824)
..+..||+.+.++..+...... ....-+++++. ++.|||.... ..+.++|+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 5688899988777654221110 01123566666 5789987431 3488899887766
Q ss_pred EEeccCCCC---cceEEEEEE--CCEEEEEecccC------------CCCCCeEEEEeCCCCcEEeec-CCCcccCceEE
Q psy17309 537 KEIAPMNFK---RCYVSTAVH--QDVIYAMGGYNG------------QRRQNSVEKYNYTENQWSLIA-PMNVERSDASA 598 (824)
Q Consensus 537 ~~~~~~~~~---r~~~~~~~~--~~~iyv~GG~~~------------~~~~~~~~~yd~~t~~W~~~~-~~p~~r~~~~~ 598 (824)
+.+...... ..-..+++- +|.||+.-.... ......+++||+.+.+.+.+. .+. ...++
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~---~p~gi 190 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH---VPGGA 190 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES---CCCEE
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc---cCcce
Confidence 554322111 112233333 578998642210 112357999999888765542 121 12233
Q ss_pred EEE-C-CEEEEEcccCCCCcCCceEEEeCCC---CeEEEcCCCCCCCcceEEEEE-CCEEEEEecCCCC-----CccceE
Q psy17309 599 TTL-Q-GKIYITGGFNGHNCLNSCEVYDPEC---NQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGM-----SRMCNG 667 (824)
Q Consensus 599 ~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~-----~~~~~v 667 (824)
+.- + +.|||.-.. .+.+.+||+.+ ...+.+..++. -.+++.- +|.|||....... .....+
T Consensus 191 a~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 191 EVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp EECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred EECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC---CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 333 3 358887322 25788999875 23444333332 2223322 5789988642100 012468
Q ss_pred EEEeCCCCCEEECCCCCC---CCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 668 EKYNPVTKTWSQVPDMYN---PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 668 ~~yd~~~~~W~~~~~~p~---~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
.+||+....-..+.. |. .....+++.-+++|||.+..+ +.+.+|+++.+
T Consensus 263 ~~~d~~G~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~~~-----~~i~~~~~~~~ 314 (322)
T 2fp8_A 263 IKFDEFGNILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTLFH-----GSVGILVYDKK 314 (322)
T ss_dssp EEECTTSCEEEEEEC-CTTTTTSCCCEEEEETTEEEEECSSC-----SEEEEEEC---
T ss_pred EEECCCCCEEEEEEC-CCCCccccceEEEEeCCEEEEeecCC-----CceEEEecccc
Confidence 999997554444321 11 122234445689999886432 36788887643
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.71 E-value=4.5 Score=41.60 Aligned_cols=190 Identities=12% Similarity=0.056 Sum_probs=103.5
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCC--cEEeecCC------CcccC
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSLIAPM------NVERS 594 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~--~W~~~~~~------p~~r~ 594 (824)
..+..+|+.+++.........-..-+.+++. ++.||+.... ...+.+||+... .-..+... .....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 3699999988776432221111122334443 6789988652 357999998765 22222211 11111
Q ss_pred c-eEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCC-------CCCCc-ceEEEEE-C-CEEEEEecCCCC
Q psy17309 595 D-ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-------RHRRS-GVSCIAY-H-ECIYVIGGFNGM 661 (824)
Q Consensus 595 ~-~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-------p~~r~-~~~~~~~-~-~~iyv~GG~~~~ 661 (824)
. ..+++. ++.|||..++. ...+.+||+....-..+... +.... -.+++.- + +.||+....
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--- 216 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--- 216 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---
T ss_pred CCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---
Confidence 2 233443 68999997532 25788999765544433211 11111 2233333 4 899998764
Q ss_pred CccceEEEEeCCCCCEEEC-CCCCCCCcceEEEEECCEEEEEccCCC--CceeeEEEEEECCCCcEEec
Q psy17309 662 SRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDDMIFAIGGFNG--VTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 662 ~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~--~~~~~~v~~yd~~~~~W~~~ 727 (824)
...|.+||+.+.+.... ..........+++...+.+|...|..- ......+.++|+.+.+....
T Consensus 217 --~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 217 --NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp --TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred --CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 25799999986665443 211222222344444577777766422 11234688999888766543
No 169
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.64 E-value=1.3 Score=47.53 Aligned_cols=202 Identities=11% Similarity=-0.043 Sum_probs=108.4
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
+.++...+...+......++.+|.....-..+..-.. .-.+.+. -+++.+++++.++. ...++++|+.+.+...+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~--~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQ--PLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQV 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESS--CEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCC--cceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEe
Confidence 3444444432222223678999988765544432211 1122222 25666666654321 25899999999887766
Q ss_pred cCCCcccCceEEEEE-CCE-EEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCC
Q psy17309 587 APMNVERSDASATTL-QGK-IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 662 (824)
Q Consensus 587 ~~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 662 (824)
...+. ...+.+.. +|+ |++.+..++ ...++.+|+.+.+...+...+ ........ +++.+++++....
T Consensus 219 ~~~~~--~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdg~~l~~~s~~~g- 289 (415)
T 2hqs_A 219 ASFPR--HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGR---SNNTEPTWFPDSQNLAFTSDQAG- 289 (415)
T ss_dssp ECCSS--CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCS---SCEEEEEECTTSSEEEEEECTTS-
T ss_pred ecCCC--cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCC---CcccceEECCCCCEEEEEECCCC-
Confidence 54332 11222222 454 554544332 246999999988876664322 12222333 5664555442211
Q ss_pred ccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEecc
Q psy17309 663 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (824)
...++.+|+.+.+-..+... .. ....+.+ +++.+++++.+.. ...++++|+++.+...+.
T Consensus 290 -~~~i~~~d~~~~~~~~l~~~--~~-~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 290 -RPQVYKVNINGGAPQRITWE--GS-QNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp -SCEEEEEETTSSCCEECCCS--SS-EEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECC
T ss_pred -CcEEEEEECCCCCEEEEecC--CC-cccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEec
Confidence 34789999988765554321 11 1222233 5665555554322 247999999998887664
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.62 E-value=5.4 Score=46.20 Aligned_cols=253 Identities=9% Similarity=-0.087 Sum_probs=129.9
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCC-----------cccceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGN-----------EYYNSCR 527 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~-----------~~~~~~~ 527 (824)
+..++++....+.....++.+|..+++........ .. ..+.+.. +++.++++..+.. .....++
T Consensus 136 g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~---~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (710)
T 2xdw_A 136 GEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER---VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY 211 (710)
T ss_dssp SSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE---EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEE
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC---cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEE
Confidence 34455544333334457899999998876532111 01 1123333 4444444443322 2245689
Q ss_pred EEECCCCceE--EeccCC-CCcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCC------C--cEEeecCCCcccCc
Q psy17309 528 CFNAVTKVWK--EIAPMN-FKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTE------N--QWSLIAPMNVERSD 595 (824)
Q Consensus 528 ~yd~~~~~W~--~~~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t------~--~W~~~~~~p~~r~~ 595 (824)
.++..+.+.. .+...+ .+........ -+++..+++...+....+.++.+|..+ . .+..+..-.....
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~- 290 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY- 290 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-
T ss_pred EEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-
Confidence 9999887632 222222 1222233332 255544444332222257899999876 4 5776654322221
Q ss_pred eEEEEECCEEEEEcccCCCCcCCceEEEeCCCC---eEEEcCCCCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEe
Q psy17309 596 ASATTLQGKIYITGGFNGHNCLNSCEVYDPECN---QWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYN 671 (824)
Q Consensus 596 ~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd 671 (824)
.....-++.||+.+..+. ....+..+|..+. .|+.+.+-.....-...+.. ++.+++....++ ...++++|
T Consensus 291 ~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~ 365 (710)
T 2xdw_A 291 DYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV---KNTLQLHD 365 (710)
T ss_dssp EEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT---EEEEEEEE
T ss_pred EEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC---EEEEEEEE
Confidence 122233678888765432 2457889998775 48877542221222234445 678887765432 35688999
Q ss_pred CCCCC-EEECCCCCCCCcceEEEEE--CC-EEEEEccCCCCceeeEEEEEECCCCc--EEec
Q psy17309 672 PVTKT-WSQVPDMYNPRSNFAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEKTDE--WYEA 727 (824)
Q Consensus 672 ~~~~~-W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 727 (824)
+.+.+ ...+. ++ ......+.. ++ .+++.... . ..-..++.||..+++ .+.+
T Consensus 366 ~~~g~~~~~l~-~~--~~~v~~~~~s~d~~~l~~~~ss-~-~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 366 LATGALLKIFP-LE--VGSVVGYSGQKKDTEIFYQFTS-F-LSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp TTTCCEEEEEC-CC--SSEEEEEECCTTCSEEEEEEEC-S-SCCCEEEEEETTSSSCCCEEE
T ss_pred CCCCCEEEecC-CC--CceEEEEecCCCCCEEEEEEeC-C-CCCCEEEEEECCCCccceEEe
Confidence 85554 44443 22 111222222 33 45444221 1 122478999998877 6554
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.61 E-value=0.46 Score=50.30 Aligned_cols=195 Identities=9% Similarity=-0.062 Sum_probs=97.0
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE--CCE-EEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceE-EE
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDV-IYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDAS-AT 599 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~-~~ 599 (824)
..++.+|+.+++...+... .......+.. ++. |++............++.+|+.+..+..+.. ..+..... .+
T Consensus 168 ~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~ 244 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEF 244 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEE
T ss_pred ceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceE
Confidence 4577788887776655432 1222222222 344 4444321111112578999998887776654 21111111 22
Q ss_pred EE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecCCC-----------CCccce
Q psy17309 600 TL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNG-----------MSRMCN 666 (824)
Q Consensus 600 ~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-----------~~~~~~ 666 (824)
.. +++.+++.+.........++.+|+.+++...+...+. .. .+..- +++++++++... ......
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 22 5553333333222222349999999888776654442 11 22333 777777654321 012367
Q ss_pred EEEEeCCCCCEEECCCCCCC----------CcceEEEEECC-EEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 667 GEKYNPVTKTWSQVPDMYNP----------RSNFAIEVIDD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 667 v~~yd~~~~~W~~~~~~p~~----------r~~~~~~~~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
++.+|+.+.+...+...+.. ........-++ +|++.....+ ...++.+|..+..++.+
T Consensus 322 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~---~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 322 LYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG---VPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS---SCEEEEEECCTTCC---
T ss_pred EEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC---CceEEEEEEcccccccc
Confidence 99999988765554322210 01111222245 4555443322 23688999888877665
No 172
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.60 E-value=0.83 Score=47.98 Aligned_cols=190 Identities=15% Similarity=0.112 Sum_probs=90.5
Q ss_pred CCEEEEEeecCCCcc-cceEEEEECCCCceEEeccCCC----Ccc-eEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCC
Q psy17309 508 GYNIYVIGGFDGNEY-YNSCRCFNAVTKVWKEIAPMNF----KRC-YVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTE 580 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~-~~~~~~yd~~~~~W~~~~~~~~----~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t 580 (824)
++.+++.|+.+.... -..++.|+..+..= ...+.. ... -.+++.. ++.++ .|+.+ ..+.+||+.+
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~--~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d-----g~v~lWd~~~ 124 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAP--NESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS-----GAVELWEILE 124 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC-----CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT-----SCEEEC----
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCc--ceeEecccCCCCCCEEEEEEcCCCCEE-EEECC-----CEEEEeeccc
Confidence 778888887543221 24577777655321 111111 111 1233444 45544 45533 3578888877
Q ss_pred CcEEeecCCC---cccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--C-CEEE
Q psy17309 581 NQWSLIAPMN---VERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H-ECIY 653 (824)
Q Consensus 581 ~~W~~~~~~p---~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iy 653 (824)
++-....... ....-.+++.. +++.++.|+.+ ..+..||..+.+-... +........++.+ + +.++
T Consensus 125 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 125 KESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVKVWDLSQKAVLKS--YNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp ----CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTCSSCE
T ss_pred cceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEccCCCcee
Confidence 6532222111 11111122222 67777888765 3688899988764332 2221222223333 3 3577
Q ss_pred EEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE---CCEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 654 VIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
+.||.+ ..+.+||+.+.+-..............++.+ ++++++.|+.++ .+.+||+.+.
T Consensus 198 ~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~ 259 (357)
T 4g56_B 198 LSCGED-----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNP 259 (357)
T ss_dssp EEEETT-----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCG
T ss_pred eeeccC-----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc-----ceeEEECCCC
Confidence 777754 4578888877653322222222222233333 467888887655 5788888764
No 173
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.57 E-value=1.7 Score=49.15 Aligned_cols=231 Identities=10% Similarity=0.018 Sum_probs=114.4
Q ss_pred CCEEEEEccCCCCCCCceEEEEECCCC----c-EEEcccCCCCCCCc-eeEEEEE---CCEEEEEeecCCCcccceEEEE
Q psy17309 459 HEILFAIGGWSGGSPTDFVETYDTRAD----R-WVKIDQVDPMGPRA-YHGTAVI---GYNIYVIGGFDGNEYYNSCRCF 529 (824)
Q Consensus 459 ~~~l~~~GG~~~~~~~~~~~~yd~~~~----~-W~~~~~~~~~~~r~-~~~~~~~---~~~lyv~GG~~~~~~~~~~~~y 529 (824)
.+..+++|+ ...+..||..+. + -..+.. .... -.+++.. ++.+++.|+.+ ..+..|
T Consensus 29 dg~~l~~~~------~~~v~v~~~~~~~~~~~~~~~~~~----h~~~~v~~~~~sp~~~~~~l~s~~~d-----g~v~vw 93 (615)
T 1pgu_A 29 TTNAIAYPC------GKSAFVRCLDDGDSKVPPVVQFTG----HGSSVVTTVKFSPIKGSQYLCSGDES-----GKVIVW 93 (615)
T ss_dssp TTTEEEEEE------TTEEEEEECCSSCCSSCSEEEECT----TTTSCEEEEEECSSTTCCEEEEEETT-----SEEEEE
T ss_pred CCCEEEEec------CCeEEEEECCCCCCccccceEEec----CCCceEEEEEECcCCCCCEEEEecCC-----CEEEEE
Confidence 344555555 236888988765 2 222211 1111 2233332 45677777754 357788
Q ss_pred ECCCC------ceEEeccCCCC-cceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE
Q psy17309 530 NAVTK------VWKEIAPMNFK-RCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 601 (824)
Q Consensus 530 d~~~~------~W~~~~~~~~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~ 601 (824)
|..++ ....+..+... ..-.+++.. ++..++.+|.+.. ....++.+|... .+..+.........+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d~~~----~~~~~~~~~~~v~~~~~ 168 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDSGN----SLGEVSGHSQRINACHL 168 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTTCC----EEEECCSCSSCEEEEEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEECCC----cceeeecCCccEEEEEE
Confidence 87644 33333222211 112223222 5666666664322 234677777322 11122222222222222
Q ss_pred --CCE-EEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCc---ceEEEEE--C-CEEEEEecCCCCCccceEEEEeC
Q psy17309 602 --QGK-IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRS---GVSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNP 672 (824)
Q Consensus 602 --~~~-lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~---~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~ 672 (824)
++. +++.|+.+ ..+..||..+.+-... +..... ...++.+ + +..++.|+.+ ..+.+||.
T Consensus 169 ~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vwd~ 236 (615)
T 1pgu_A 169 KQSRPMRSMTVGDD-----GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDG 236 (615)
T ss_dssp CSSSSCEEEEEETT-----TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEET
T ss_pred CCCCCcEEEEEeCC-----CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCC-----CeEEEEEC
Confidence 333 67777654 4688888776553322 221111 2333333 4 6777777754 46889998
Q ss_pred CCCCEEECC-CC--CCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEe
Q psy17309 673 VTKTWSQVP-DM--YNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 673 ~~~~W~~~~-~~--p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
.+.+....- .. .....-.+++..++..++.|+.++ .+.+||..+.+-..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADA-----TIRVWDVTTSKCVQ 288 (615)
T ss_dssp TTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTS-----EEEEEETTTTEEEE
T ss_pred CCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCC-----cEEEEECCCCcEEE
Confidence 876643322 10 111111122222788888887654 68889988765443
No 174
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.57 E-value=0.74 Score=53.78 Aligned_cols=252 Identities=7% Similarity=-0.111 Sum_probs=124.1
Q ss_pred CCEEEEEccC-CCCCCCceEEEEECCCCcEEEcccCCCCCC--------------C------c-eeEEEEE-CCEEEEEe
Q psy17309 459 HEILFAIGGW-SGGSPTDFVETYDTRADRWVKIDQVDPMGP--------------R------A-YHGTAVI-GYNIYVIG 515 (824)
Q Consensus 459 ~~~l~~~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~--------------r------~-~~~~~~~-~~~lyv~G 515 (824)
.+..+++++. ..+.....++.+|..+.+...+.......+ | . -.+.+.. +++.++++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 3445555554 333334579999999888766422111000 0 0 1122222 55555555
Q ss_pred ecCCCcccceEEEEECCCC---ceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcc
Q psy17309 516 GFDGNEYYNSCRCFNAVTK---VWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE 592 (824)
Q Consensus 516 G~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~ 592 (824)
+. ..++.+|..++ .-..+..... ........-+|+..+++.. ..++++|+.+.+...+......
T Consensus 127 ~~------~~i~~~d~~~~~~~~~~~l~~~~~-~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 127 LG------GELYLYDLKQEGKAAVRQLTHGEG-FATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ET------TEEEEEESSSCSTTSCCBCCCSSS-CEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCCCCCS
T ss_pred eC------CcEEEEECCCCCcceEEEcccCCc-ccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEeccCCcc
Confidence 42 68999999887 5444332211 1111122236665555541 3799999998877665432211
Q ss_pred cC---------------ceEEEE-ECCEEEEEcccCCC----------------------------CcCCceEEEeCCC-
Q psy17309 593 RS---------------DASATT-LQGKIYITGGFNGH----------------------------NCLNSCEVYDPEC- 627 (824)
Q Consensus 593 r~---------------~~~~~~-~~~~lyv~GG~~~~----------------------------~~~~~v~~yd~~~- 627 (824)
.. ..+.+. -+|+.++++..++. .....++.+|..+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 00 011222 25554444433221 0122678889887
Q ss_pred CeEEEcCCCCCCCcc-eEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCC----CcceEEEEECCEEEEE
Q psy17309 628 NQWTLIEPMRHRRSG-VSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP----RSNFAIEVIDDMIFAI 702 (824)
Q Consensus 628 ~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~i~v~ 702 (824)
.+-..+...+..... ...+.-+|+..+++..+.......++.+|+.+.+...+...... .....+..-++++++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~ 353 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWS 353 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEE
T ss_pred CceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEE
Confidence 765544322111111 11111344444444332223356899999998877665321111 1111122236777777
Q ss_pred ccCCCCceeeEEEEEECCCCcEEec
Q psy17309 703 GGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
++.++ ...++.+|.+.. ...+
T Consensus 354 ~~~~g---~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 354 SERTG---FQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp ECTTS---SCEEEEECSSSC-EEES
T ss_pred ecCCC---ccEEEEEcCCCC-eeee
Confidence 65543 246888887665 5555
No 175
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.54 E-value=2.9 Score=42.87 Aligned_cols=219 Identities=8% Similarity=-0.012 Sum_probs=109.0
Q ss_pred ceEEEEECCCCc----EEEcccCCCCCCCceeEEEEE-CCE-EEEEeecCCCcccceEEEEEC-CCCceEEeccCCCCcc
Q psy17309 475 DFVETYDTRADR----WVKIDQVDPMGPRAYHGTAVI-GYN-IYVIGGFDGNEYYNSCRCFNA-VTKVWKEIAPMNFKRC 547 (824)
Q Consensus 475 ~~~~~yd~~~~~----W~~~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~yd~-~~~~W~~~~~~~~~r~ 547 (824)
..+..||..+.+ ...+. .....-.+++.. ++. .++.|+.+ ..+..||. .+++...+...+....
T Consensus 33 ~~v~iw~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~ 103 (342)
T 1yfq_A 33 GSLTVYKFDIQAKNVDLLQSL----RYKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGSPSFQALTNNEANLG 103 (342)
T ss_dssp SEEEEEEEETTTTEEEEEEEE----ECSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSSSSEEECBSCCCCSC
T ss_pred CeEEEEEeCCCCccccceeee----ecCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccCCceEeccccCCCCc
Confidence 457777766655 32211 112222334433 566 77777754 46899999 8887765554111122
Q ss_pred eEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCc-------EEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCce
Q psy17309 548 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ-------WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSC 620 (824)
Q Consensus 548 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-------W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v 620 (824)
-.+++...+..++.|+.+ ..+..||+.+.. .+.+..+.....-.+++...+. ++.|+.+ ..+
T Consensus 104 v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d-----~~i 172 (342)
T 1yfq_A 104 ICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNN-----SQV 172 (342)
T ss_dssp EEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEEEEST-----TEE
T ss_pred eEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-EEEEeCC-----CeE
Confidence 223333335566666643 467888876400 2223333333233334444555 5555543 468
Q ss_pred EEEeCCC-Ce--EEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCC--------CEEECCCCC--C
Q psy17309 621 EVYDPEC-NQ--WTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTK--------TWSQVPDMY--N 685 (824)
Q Consensus 621 ~~yd~~~-~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~--------~W~~~~~~p--~ 685 (824)
..||..+ .. ...... +....-.+++.. ++..++.|+.+ ..+.+||.... ......... .
T Consensus 173 ~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1yfq_A 173 QWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSID-----GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246 (342)
T ss_dssp EEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETT-----SEEEEEECCTTCCSTTCTTCEEEECCCCCTT
T ss_pred EEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecC-----CcEEEEEEcCCCcccccccceeeeccccccc
Confidence 8899877 32 222211 111112222333 56777777753 34555554432 111111100 0
Q ss_pred ---CCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 686 ---PRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 686 ---~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
.......+.+ ++++++.|+.++ .+.+||..+.+-
T Consensus 247 ~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~ 285 (342)
T 1yfq_A 247 DTNLAYPVNSIEFSPRHKFLYTAGSDG-----IISCWNLQTRKK 285 (342)
T ss_dssp CCSSCCCEEEEEECTTTCCEEEEETTS-----CEEEEETTTTEE
T ss_pred ccccceeEEEEEEcCCCCEEEEecCCc-----eEEEEcCccHhH
Confidence 0112222333 677788887655 588999887654
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.53 E-value=2.9 Score=43.95 Aligned_cols=232 Identities=7% Similarity=-0.069 Sum_probs=115.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..++.+|..+.+...+..... ......... +++.+++.... ..++.+|+.+++-..+...+... .
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~---~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~~~~~~~~~~~~~~------~ 125 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKG---DNTFGGFISTDERAFFYVKNE-----LNLMKVDLETLEEQVIYTVDEEW------K 125 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSC---BCTTTCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECCTTE------E
T ss_pred ceEEEEECCCCcEEEeecCCC---CccccceECCCCCEEEEEEcC-----CcEEEEECCCCCcEEEEeccccc------C
Confidence 467889998888776532211 111111212 44433344322 26899998887765554433221 1
Q ss_pred ECCEEEEEec-------------cc--C----------CCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCE-E
Q psy17309 554 HQDVIYAMGG-------------YN--G----------QRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGK-I 605 (824)
Q Consensus 554 ~~~~iyv~GG-------------~~--~----------~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~-l 605 (824)
.++..+++.. .. + ......++.+|+.+.+...+... .......... +++ |
T Consensus 126 ~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l 203 (396)
T 3c5m_A 126 GYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTV 203 (396)
T ss_dssp EEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEE
T ss_pred CCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC--CcccccceECCCCCCEE
Confidence 1111111110 00 0 02235789999998887666432 1211222222 344 4
Q ss_pred EEEcccCC-CCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCC
Q psy17309 606 YITGGFNG-HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD 682 (824)
Q Consensus 606 yv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 682 (824)
+.... .. ......++.+|..+..+..+.. ..+........+ +++.+++...........++++|+.+.+...+..
T Consensus 204 ~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 281 (396)
T 3c5m_A 204 GFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV 281 (396)
T ss_dssp EEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE
T ss_pred EEEec-CCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee
Confidence 44432 11 1122579999998888777654 211222222222 5553333332211112349999999888776654
Q ss_pred CCCCCcceEEEEE-CCEEEEEccCCC-----------CceeeEEEEEECCCCcEEec
Q psy17309 683 MYNPRSNFAIEVI-DDMIFAIGGFNG-----------VTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 683 ~p~~r~~~~~~~~-~~~i~v~GG~~~-----------~~~~~~v~~yd~~~~~W~~~ 727 (824)
.+. .. ....- +++++++++.+. ......++++|+.+.+...+
T Consensus 282 ~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 282 MPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp CCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEE
T ss_pred CCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEc
Confidence 432 11 22233 677776654221 01224799999988776554
No 177
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.50 E-value=2.4 Score=40.46 Aligned_cols=142 Identities=15% Similarity=0.091 Sum_probs=83.7
Q ss_pred EEEEECCEEEEEeecCCCcccceEEEEECCCCceEE--e----ccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEE
Q psy17309 503 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE--I----APMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVE 574 (824)
Q Consensus 503 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~--~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 574 (824)
+++..++.+|+|=| +.+|+++.....+.. + +.+|. ...+ +... ++++|+|-| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iDA-a~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RIDA-AYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCCE-EEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-CccE-EEEeccCCcEEEEcc-------CEEE
Confidence 45557899999987 668888766544432 1 23332 2222 2223 589999988 6788
Q ss_pred EEeCCCCcE---EeecC--CCcccCceEEEEE---CCEEEEEcccCCCCcCCceEEEeCCCCeEEE-----c----CCCC
Q psy17309 575 KYNYTENQW---SLIAP--MNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----I----EPMR 637 (824)
Q Consensus 575 ~yd~~t~~W---~~~~~--~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p 637 (824)
+|+..+-.- +.+.. +|..-...-+|.. ++++|+|-| +..++||..+++-.. + +.+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 887432211 12222 3322123334443 489999987 567899987654221 1 1223
Q ss_pred CCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC
Q psy17309 638 HRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 638 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 676 (824)
. .--++...++++|++-| +..++||..+.+
T Consensus 165 ~--~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~ 194 (207)
T 1pex_A 165 D--KVDAVYEKNGYIYFFNG-------PIQFEYSIWSNR 194 (207)
T ss_dssp S--CCSEEEEETTEEEEEET-------TEEEEEETTTTE
T ss_pred C--CccEEEEcCCcEEEEEC-------CEEEEEeCCccE
Confidence 2 22344456999999988 578899987654
No 178
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.49 E-value=1.9 Score=48.28 Aligned_cols=238 Identities=9% Similarity=0.001 Sum_probs=119.9
Q ss_pred CCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEEC--CCC
Q psy17309 459 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNA--VTK 534 (824)
Q Consensus 459 ~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~--~~~ 534 (824)
.+.+++.+.. ...+..+|..+.+-... ... ...-|++++. +..+|+.+. + +.+..||+ .+.
T Consensus 148 ~~~~~vs~~~-----d~~V~v~D~~t~~~~~~--i~~--g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~ 212 (543)
T 1nir_A 148 PNLFSVTLRD-----AGQIALVDGDSKKIVKV--IDT--GYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEP 212 (543)
T ss_dssp GGEEEEEEGG-----GTEEEEEETTTCCEEEE--EEC--STTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSC
T ss_pred CCEEEEEEcC-----CCeEEEEECCCceEEEE--Eec--CcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCC
Confidence 3566666542 35688899988765431 111 1124555444 456666653 1 67999999 555
Q ss_pred ceEEeccCCCCcceEEEEEE-----CC-EEEEEecccCCCCCCeEEEEeCCCCcEEe-ecC--C--------CcccCceE
Q psy17309 535 VWKEIAPMNFKRCYVSTAVH-----QD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL-IAP--M--------NVERSDAS 597 (824)
Q Consensus 535 ~W~~~~~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~-~~~--~--------p~~r~~~~ 597 (824)
+- +..++....-..++.. ++ .+|+.+-. .+.+.++|..+.+-.. ++. + |.+|....
T Consensus 213 ~~--~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i 285 (543)
T 1nir_A 213 TK--VAEIKIGIEARSVESSKFKGYEDRYTIAGAYW-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAI 285 (543)
T ss_dssp EE--EEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEE
T ss_pred cE--EEEEecCCCcceEEeCCCcCCCCCEEEEEEcc-----CCeEEEEeccccccceeecccCcccCccccccCCceEEE
Confidence 42 3333333223334443 45 45554322 2568888988765432 221 1 12222222
Q ss_pred EEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecCCCCCccceEEEEeCCC
Q psy17309 598 ATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCNGEKYNPVT 674 (824)
Q Consensus 598 ~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~ 674 (824)
+... ++.+|+.... ...+..+|..+.+-..+..++..+.-+..+.. +++ +|+.+.. .+.|.++|+.+
T Consensus 286 ~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~t 355 (543)
T 1nir_A 286 IASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKD 355 (543)
T ss_dssp EECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTT
T ss_pred EECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCC
Confidence 2222 4555555432 35788888876431111111222222233332 455 5555432 36788899988
Q ss_pred CCEEEC---CCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCC-----cEEeccCCCC
Q psy17309 675 KTWSQV---PDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD-----EWYEATDMNI 732 (824)
Q Consensus 675 ~~W~~~---~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~~p~ 732 (824)
.+-... ...|.+........- ++.+|+.+.... +.|-++|.++. .|+.+..++.
T Consensus 356 g~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d----~~V~v~d~~~~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 356 RRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD----GSISLIGTDPKNHPQYAWKKVAELQG 418 (543)
T ss_dssp TEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred CeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC----ceEEEEEeCCCCCchhcCeEEEEEEc
Confidence 764332 233444333332222 378888865322 25778887762 3776655443
No 179
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.42 E-value=5.3 Score=41.15 Aligned_cols=220 Identities=9% Similarity=0.106 Sum_probs=115.6
Q ss_pred EEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCC-CCcceEEEEE-E
Q psy17309 477 VETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTAV-H 554 (824)
Q Consensus 477 ~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~-~ 554 (824)
++.-.-...+|..+............++...++.+|+.|.. ..+++-+-.-.+|+.+.... .+.....++. -
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~ 131 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALG 131 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEE
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC------CeEEEECCCCCCceECccccCCCCCeEEEEEEC
Confidence 44443345689986432111122344555557888887631 23554333457899876432 2222334443 4
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEe-CCCCeEEE
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYD-PECNQWTL 632 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd-~~~~~W~~ 632 (824)
++.+|+.|.. ..+++-+=.-.+|+.+.... +...++++.. ++.+|++|- . ..+++-+ ....+|+.
T Consensus 132 ~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~-----G~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 132 NGSAEMITNV------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSS-R-----GSFYSTWEPGQTAWEP 198 (327)
T ss_dssp TTEEEEEETT------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEET-T-----SSEEEEECTTCSSCEE
T ss_pred CCCEEEEeCC------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEEC-C-----CcEEEEeCCCCCceeE
Confidence 6788887742 23554443457899885422 2233444443 566776652 2 2344433 22578998
Q ss_pred cCCCCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCC-CCCEEECCC--CCCCCcceEEEEE-CCEEEEEccCCC
Q psy17309 633 IEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPV-TKTWSQVPD--MYNPRSNFAIEVI-DDMIFAIGGFNG 707 (824)
Q Consensus 633 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~--~p~~r~~~~~~~~-~~~i~v~GG~~~ 707 (824)
+.. +.+...+.++.. ++.+|+.+.. ..++..+.. ..+|+.+.. ++.....++++.. ++.+|++|+..
T Consensus 199 ~~~-~~~~~~~~~~~~~~g~~~~~~~~------G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g- 270 (327)
T 2xbg_A 199 HNR-TTSRRLHNMGFTPDGRLWMIVNG------GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG- 270 (327)
T ss_dssp EEC-CSSSCEEEEEECTTSCEEEEETT------TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT-
T ss_pred CCC-CCCCccceeEECCCCCEEEEeCC------ceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC-
Confidence 854 333344444433 6788887642 234454333 568988753 2332223333333 67888887632
Q ss_pred CceeeEEEEEECCCCcEEecc
Q psy17309 708 VTTIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 708 ~~~~~~v~~yd~~~~~W~~~~ 728 (824)
.+++-.-.-.+|+.+.
T Consensus 271 -----~i~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 271 -----ALLCSQDGGQTWQQDV 286 (327)
T ss_dssp -----CEEEESSTTSSCEECG
T ss_pred -----eEEEeCCCCcccEEcC
Confidence 2333222357899885
No 180
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.37 E-value=2 Score=44.52 Aligned_cols=228 Identities=9% Similarity=0.047 Sum_probs=111.9
Q ss_pred EEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEe
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 539 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 539 (824)
..++.|+.+ ..+..||..+.......... .....-.+++.. ++..++.|+.+ ..+..||..+.+....
T Consensus 55 ~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 55 NFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQ-MHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp EEEEEEETT-----SEEEEEEECTTSCEEEEEEE-ECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred eEEEEECCC-----CcEEEEEcCCCCceeEEEec-cccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 666666642 45778887762221100000 011112233333 56666677654 4688999998876554
Q ss_pred ccCCCCcceEEEEE---ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCc
Q psy17309 540 APMNFKRCYVSTAV---HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNC 616 (824)
Q Consensus 540 ~~~~~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~ 616 (824)
..... .-.+++. .++.+++.|+.+ ..+..||..+.+-. ..+.......+.....+.+++.++ +
T Consensus 124 ~~~~~--~v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~---- 189 (368)
T 3mmy_A 124 AQHDA--PVKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPM--MVLQLPERCYCADVIYPMAVVATA-E---- 189 (368)
T ss_dssp EECSS--CEEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCS--EEEECSSCEEEEEEETTEEEEEEG-G----
T ss_pred ccccC--ceEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEE--EEEecCCCceEEEecCCeeEEEeC-C----
Confidence 33221 1223333 256777777754 46888998776421 112222223334444555554433 2
Q ss_pred CCceEEEeCCCCe--EEEcCCCCCCCcceEEEEECC----EEEEEecCCCCCccceEEEEeCCCCCE-----EECC--CC
Q psy17309 617 LNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHE----CIYVIGGFNGMSRMCNGEKYNPVTKTW-----SQVP--DM 683 (824)
Q Consensus 617 ~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~----~iyv~GG~~~~~~~~~v~~yd~~~~~W-----~~~~--~~ 683 (824)
..+..||..... +..+...............+. ..++.|+.+ ..+.+||.....- .... ..
T Consensus 190 -~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 190 -RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE-----GRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp -GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT-----SEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred -CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC-----CcEEEEecCCCCccccceeeeeeecc
Confidence 457788876543 333332221122222222222 236666643 4677888765421 1100 00
Q ss_pred --CCCCc----ceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 684 --YNPRS----NFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 684 --p~~r~----~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
..... ....+.+ ++++++.|+.++ .+.+||..+.+-
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-----~i~iwd~~~~~~ 307 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG-----RFSFWDKDARTK 307 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTCCEEEEETTS-----CEEEEETTTTEE
T ss_pred cccccccccccceEEEEEecCCCEEEEEccCC-----eEEEEECCCCcE
Confidence 00000 1222233 677888888765 588999887643
No 181
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.36 E-value=1.1 Score=48.45 Aligned_cols=173 Identities=15% Similarity=0.163 Sum_probs=98.7
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEe--ccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI--APMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
++.+|+|-| +..|+||..+++.... +.+| .. -++....+++|+|-| +..++||+.+.+-..
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~i-DAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--NC-TSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--CC-SEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--cc-chheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 578899988 6789999988765432 2222 22 244445799999988 678899987654211
Q ss_pred ------------ecCCC------------------cccCceEEEE--ECCEEEEEcccCCCCcCCceEEEeCCCCeEE--
Q psy17309 586 ------------IAPMN------------------VERSDASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWT-- 631 (824)
Q Consensus 586 ------------~~~~p------------------~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~-- 631 (824)
++... .+.....++. .+|++|+|-| +..+++|...+.+.
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCE
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCcc
Confidence 11100 0111223333 3689999977 33455554332221
Q ss_pred Ec----CCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECC----------CCCCC--CcceEEEEE
Q psy17309 632 LI----EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP----------DMYNP--RSNFAIEVI 695 (824)
Q Consensus 632 ~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~----------~~p~~--r~~~~~~~~ 695 (824)
.+ +.+|.. --++...++++|+|=| +.+++|+.... .+.++ .+|.. ...-.++..
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~ 363 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFV 363 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEEC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEE
Confidence 11 234433 2344456899999987 57888886531 22221 12222 112233332
Q ss_pred ---CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 696 ---DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 696 ---~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
++++|++-|. ..|.||...
T Consensus 364 ~~~~~ktyfFkG~-------~ywryd~~~ 385 (460)
T 1qhu_A 364 CPGSSRLHIMAGR-------RLWWLDLKS 385 (460)
T ss_dssp CTTCCEEEEEETT-------EEEEEEGGG
T ss_pred eCCCCEEEEEECC-------EEEEEECCC
Confidence 6899999773 688898764
No 182
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.35 E-value=0.73 Score=47.90 Aligned_cols=187 Identities=12% Similarity=0.043 Sum_probs=92.8
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCc-ccCceEEEEE
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNV-ERSDASATTL 601 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~-~r~~~~~~~~ 601 (824)
-.++.+|..++++..+........-..++. -+++||+.+... ....+++||+.+.+++.+..... ...-..++..
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 347788888888876443221111112332 367788776421 12578999998888877654322 2222233333
Q ss_pred -CC-EEEEEcccCCCCcCCceEEEeCC-CCeEEEcCCC------CCCC----cceEEEEE-CCEEEEEecCCCCCccceE
Q psy17309 602 -QG-KIYITGGFNGHNCLNSCEVYDPE-CNQWTLIEPM------RHRR----SGVSCIAY-HECIYVIGGFNGMSRMCNG 667 (824)
Q Consensus 602 -~~-~lyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~------p~~r----~~~~~~~~-~~~iyv~GG~~~~~~~~~v 667 (824)
++ .||+.+..+ ..+..||.. +.+...+... |.+| ..+.++.. ++++|+.+.. .+.+
T Consensus 95 pdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----~~~v 164 (347)
T 3hfq_A 95 EARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----SDKV 164 (347)
T ss_dssp TTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----TTEE
T ss_pred CCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----CCEE
Confidence 44 566654322 457778874 3344333211 1111 11222222 6777776543 2478
Q ss_pred EEEeCC-CCCEEECCC--CCCCCcceEEEEE--CCE-EEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 668 EKYNPV-TKTWSQVPD--MYNPRSNFAIEVI--DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 668 ~~yd~~-~~~W~~~~~--~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
.+||+. +.+...+.. .+... ....+.+ +++ +|+.+..++ .-.++.++..+.+++.+
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~g~-~p~~~~~spdg~~l~v~~~~~~---~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLTMEAGF-GPRHLVFSPDGQYAFLAGELSS---QIASLKYDTQTGAFTQL 226 (347)
T ss_dssp EEEEECTTSCEEEEEEEECCTTC-CEEEEEECTTSSEEEEEETTTT---EEEEEEEETTTTEEEEE
T ss_pred EEEEECCCCcEEEeeeEEcCCCC-CCceEEECCCCCEEEEEeCCCC---EEEEEEecCCCCceEEe
Confidence 888887 555554321 11111 1112233 554 777654332 11344445546776544
No 183
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.35 E-value=1.4 Score=46.84 Aligned_cols=240 Identities=11% Similarity=0.056 Sum_probs=118.3
Q ss_pred EEEEEccCCCC-----CCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCC
Q psy17309 461 ILFAIGGWSGG-----SPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTK 534 (824)
Q Consensus 461 ~l~~~GG~~~~-----~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~ 534 (824)
.+++.|..... .....+..||..+..-... .........-.+++.. ++.+++.|+.+ ..+..||..+.
T Consensus 26 ~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~v~vw~~~~~ 99 (416)
T 2pm9_A 26 PLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP-IASLQVDSKFNDLDWSHNNKIIAGALDN-----GSLELYSTNEA 99 (416)
T ss_dssp CEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC-SCCCCCSSCEEEEEECSSSSCEEEEESS-----SCEEEECCSST
T ss_pred CEEEEEecCcccccccCCCCeEEEEEccCCCCCcE-EEEEecCCceEEEEECCCCCeEEEEccC-----CeEEEeecccc
Confidence 36677643321 2234578888776542110 1111112222233333 56666777654 35888888761
Q ss_pred --ceEEeccCCCCc-ceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCc------EE-eecCCC-cccCceEEEEE
Q psy17309 535 --VWKEIAPMNFKR-CYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQ------WS-LIAPMN-VERSDASATTL 601 (824)
Q Consensus 535 --~W~~~~~~~~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~------W~-~~~~~p-~~r~~~~~~~~ 601 (824)
....+..+.... .-.+++.. ++.+++.|+.+ ..+.+||..+.. -. .+.... ....-.+++..
T Consensus 100 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 174 (416)
T 2pm9_A 100 NNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN-----GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWN 174 (416)
T ss_dssp TSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS-----SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEEC
T ss_pred cccccchhhccCCccceEEEEEcCCCCCEEEEEcCC-----CeEEEEECCCCccccccccccccccccCCCCCeeEEEeC
Confidence 111222222111 11223333 26777777754 457888887764 11 111111 11122223333
Q ss_pred -C-CEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCC----CcceEEEEE--C-CEEEEEecCCCCCccceEEEEeC
Q psy17309 602 -Q-GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR----RSGVSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNP 672 (824)
Q Consensus 602 -~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~ 672 (824)
+ +.+++.|+.+ ..+..||..+.+-...-..+.. ......+.+ + ..+++.|+.++. ...+.+||.
T Consensus 175 ~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~ 247 (416)
T 2pm9_A 175 QSLAHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDL 247 (416)
T ss_dssp SSCTTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEET
T ss_pred CCCCcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeC
Confidence 3 5677777755 4688999988765443332211 222233333 3 357777775421 126778888
Q ss_pred CCCCEEECCCCC-CCCcceEEEEE---CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 673 VTKTWSQVPDMY-NPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 673 ~~~~W~~~~~~p-~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
.+..- .+..+. ........+.+ ++++++.|+.++ .+.+||..+.+-
T Consensus 248 ~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~ 297 (416)
T 2pm9_A 248 RNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQ 297 (416)
T ss_dssp TSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----EEEEECSSSCCE
T ss_pred CCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCcc
Confidence 76431 111222 11122223333 678888888765 588898877643
No 184
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.35 E-value=1.5 Score=51.37 Aligned_cols=212 Identities=10% Similarity=0.047 Sum_probs=110.2
Q ss_pred ceEEEEECCCCcEEEcccCCCC---CCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCC------CceE---Eec-
Q psy17309 475 DFVETYDTRADRWVKIDQVDPM---GPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT------KVWK---EIA- 540 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~---~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~------~~W~---~~~- 540 (824)
..+.+||+.++++..+...... ....-.++... ++.|++. ... ..+++||+.+ ..+. ...
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 465 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TCL-----GGIFVVDKHKLMQSTSGQYIAEQNYSV 465 (758)
T ss_dssp TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ESS-----SCEEEEEHHHHHHCCSSEEECSEEECG
T ss_pred CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-ECC-----CceEEEccccccccCCcceeccccccc
Confidence 3688999999988775421111 11222333333 5677763 221 2377888653 1221 111
Q ss_pred --cCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcc-cCceEEEEE--CCEEEEEcccCCC
Q psy17309 541 --PMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE-RSDASATTL--QGKIYITGGFNGH 614 (824)
Q Consensus 541 --~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~~~~~--~~~lyv~GG~~~~ 614 (824)
.++.. .-.++..- +|.|++.||.. .-+.+||+.+++++....-... .....+... +|.|++. ..
T Consensus 466 ~~~l~~~-~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~--- 535 (758)
T 3ott_A 466 HNGLSGM-FINQIIPDNEGNVWVLLYNN-----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FH--- 535 (758)
T ss_dssp GGTCSCS-CEEEEEECTTSCEEEEETTC-----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ET---
T ss_pred ccccccc-eeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ec---
Confidence 12211 11222222 57899876642 3489999999999876421111 111122222 5788864 32
Q ss_pred CcCCceEEEeCCCCeEEEcC--CCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEE
Q psy17309 615 NCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 692 (824)
Q Consensus 615 ~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 692 (824)
.-+.+||+.+++++... .+|.. ...+++.-+|.|++... +.+.+||+++.+..... ++......++
T Consensus 536 ---~Gl~~~~~~~~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~-~~~~~~~~~~ 603 (758)
T 3ott_A 536 ---GGVMRINPKDESQQSISFGSFSNN-EILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN-MTNKRFTSLL 603 (758)
T ss_dssp ---TEEEEECC--CCCCBCCCCC---C-CEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC---CCCCCSEEE
T ss_pred ---CceEEEecCCCceEEecccCCCcc-ceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec-CCCCceeeeE
Confidence 24889999988876553 34432 22334445788988663 45889999998877643 3332222222
Q ss_pred EEE-CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 693 EVI-DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 693 ~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
... +|.||+ ||.+ -+-.|||+.
T Consensus 604 ~~~~~G~l~f-G~~~------Gl~~f~p~~ 626 (758)
T 3ott_A 604 FDPKEDCVYL-GGAD------GFGISHSNL 626 (758)
T ss_dssp EETTTTEEEE-ECBS------EEEEEEC--
T ss_pred EECCCCcEEE-ecCC------ceEEEChhh
Confidence 222 566654 5543 356778764
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.30 E-value=3.2 Score=41.79 Aligned_cols=221 Identities=7% Similarity=-0.071 Sum_probs=116.1
Q ss_pred EEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEe
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 539 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 539 (824)
.+++++.. ...+..||+.+. ...+... ...-.+++.. ++.+|+.... ...+.+||+.+++...+
T Consensus 41 ~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~----~~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 41 AVIFSDVR-----QNRTWAWSDDGQ-LSPEMHP----SHHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESI 105 (296)
T ss_dssp EEEEEEGG-----GTEEEEEETTSC-EEEEESS----CSSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEE
T ss_pred EEEEEeCC-----CCEEEEEECCCC-eEEEECC----CCCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEE
Confidence 35555532 246889999887 5543221 1222344443 6677766531 25699999988887765
Q ss_pred ccCCCC----cceEEEEEECCEEEEE----eccc--------CCCCCCeEEEEeCCCCcEEeec-CCCcccCceEEEEE-
Q psy17309 540 APMNFK----RCYVSTAVHQDVIYAM----GGYN--------GQRRQNSVEKYNYTENQWSLIA-PMNVERSDASATTL- 601 (824)
Q Consensus 540 ~~~~~~----r~~~~~~~~~~~iyv~----GG~~--------~~~~~~~~~~yd~~t~~W~~~~-~~p~~r~~~~~~~~- 601 (824)
...... +....++.-+|.+|+. |... .......++++|+. .+...+. .+..+ .+++..
T Consensus 106 ~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~gi~~s~ 181 (296)
T 3e5z_A 106 ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP---NGLAFLP 181 (296)
T ss_dssp ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE---EEEEECT
T ss_pred eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC---ccEEECC
Confidence 432111 1112223336789986 4311 01123579999988 5554442 22111 233332
Q ss_pred CCEEEEEcccCCCCcCCceEEEeCC-CCeE-EE--cCCCCCCCcceEEEE-ECCEEEEEecCCCCCccceEEEEeCCCCC
Q psy17309 602 QGKIYITGGFNGHNCLNSCEVYDPE-CNQW-TL--IEPMRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 602 ~~~lyv~GG~~~~~~~~~v~~yd~~-~~~W-~~--~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 676 (824)
++++++.+.. ...+++||+. +++. .. +-....... .+++. -+|+||+..+ ..|.+||+....
T Consensus 182 dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p-~~i~~d~~G~l~v~~~-------~~v~~~~~~g~~ 248 (296)
T 3e5z_A 182 SGNLLVSDTG-----DNATHRYCLNARGETEYQGVHFTVEPGKT-DGLRVDAGGLIWASAG-------DGVHVLTPDGDE 248 (296)
T ss_dssp TSCEEEEETT-----TTEEEEEEECSSSCEEEEEEEECCSSSCC-CSEEEBTTSCEEEEET-------TEEEEECTTSCE
T ss_pred CCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeEeeCCCCCC-CeEEECCCCCEEEEcC-------CeEEEECCCCCE
Confidence 5666554432 2578889876 4444 11 111111111 12232 3688998872 578999998554
Q ss_pred EEECCCCCCCCcceEEEEE---C-CEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 677 WSQVPDMYNPRSNFAIEVI---D-DMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 677 W~~~~~~p~~r~~~~~~~~---~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
...+. .+.. ...+++ + +.||+... ..++.++++++.-
T Consensus 249 ~~~~~-~~~~---~~~~~f~~~d~~~L~v~t~-------~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 249 LGRVL-TPQT---TSNLCFGGPEGRTLYMTVS-------TEFWSIETNVRGL 289 (296)
T ss_dssp EEEEE-CSSC---CCEEEEESTTSCEEEEEET-------TEEEEEECSCCBC
T ss_pred EEEEE-CCCC---ceeEEEECCCCCEEEEEcC-------CeEEEEEcccccc
Confidence 44432 2222 222333 2 35777642 2688999888653
No 186
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.26 E-value=6.4 Score=41.69 Aligned_cols=187 Identities=10% Similarity=0.109 Sum_probs=104.2
Q ss_pred eEEEEECCC--CceEEeccCCCCcceEEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCC---Ccc--c-
Q psy17309 525 SCRCFNAVT--KVWKEIAPMNFKRCYVSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM---NVE--R- 593 (824)
Q Consensus 525 ~~~~yd~~~--~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~---p~~--r- 593 (824)
.+++++... .+|....+......-++++.. .+.||+.+... . .-.-+++.+-...+|+.+... +.. +
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g-~-~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~ 109 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG-H-LGPTVFRSDDGGGNWTEATRPPAFNKAPEGE 109 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC---
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC-C-CCccEEEeCCCCCCceECCccccCCCccccc
Confidence 367777655 689976432222233444443 46788865421 0 112577887778899987532 211 1
Q ss_pred ----Cce--EEEEE----CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCC---CC--------------CCcceEEE
Q psy17309 594 ----SDA--SATTL----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM---RH--------------RRSGVSCI 646 (824)
Q Consensus 594 ----~~~--~~~~~----~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~--------------~r~~~~~~ 646 (824)
... +++.- .+.||+.+. ...+++.+-...+|+.+... |. ....++++
T Consensus 110 ~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~ 183 (394)
T 3b7f_A 110 TGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSIL 183 (394)
T ss_dssp -CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEE
T ss_pred ccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEE
Confidence 011 23332 467877542 13477777777899987532 21 11223333
Q ss_pred EE---CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCC------CCC-----CcceEEEEE-C--CEEEEEccCCCCc
Q psy17309 647 AY---HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM------YNP-----RSNFAIEVI-D--DMIFAIGGFNGVT 709 (824)
Q Consensus 647 ~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~------p~~-----r~~~~~~~~-~--~~i~v~GG~~~~~ 709 (824)
.. .+.||+..+. ..+++.+....+|+.+... |.+ ...+.++.. . +.||+..+
T Consensus 184 ~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~----- 252 (394)
T 3b7f_A 184 VDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH----- 252 (394)
T ss_dssp ECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-----
T ss_pred ECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-----
Confidence 32 3578876542 3578888888999988532 211 122333333 1 66776432
Q ss_pred eeeEEEEEECCCCcEEeccC-CCC
Q psy17309 710 TIYHVECYDEKTDEWYEATD-MNI 732 (824)
Q Consensus 710 ~~~~v~~yd~~~~~W~~~~~-~p~ 732 (824)
..+++.+-...+|+.+.. +|.
T Consensus 253 --~gl~~s~D~G~tW~~~~~~l~~ 274 (394)
T 3b7f_A 253 --CGIYRMDRREGVWKRIGDAMPR 274 (394)
T ss_dssp --TEEEEEETTTTEEECGGGGSCT
T ss_pred --CeEEEeCCCCCcceECCCCCCC
Confidence 247888888899999853 554
No 187
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.24 E-value=1 Score=47.88 Aligned_cols=188 Identities=14% Similarity=0.137 Sum_probs=95.6
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++..++.|+.+ ..+..||..+.+-...-.-. ...-.+++.. ++..++.|+.+ ..+..||..+.+....
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQGH-EQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLT 202 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEccC-CCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEE
Confidence 66777777754 45889999887543221111 1112233332 55666666643 5688899988765432
Q ss_pred cCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEc-CCC----CCCCcceEEEEE--CCEEEEEec
Q psy17309 587 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPM----RHRRSGVSCIAY--HECIYVIGG 657 (824)
Q Consensus 587 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~----p~~r~~~~~~~~--~~~iyv~GG 657 (824)
-.... ...+++.. ++++++.|+.+ ..+..||..+..-... ... ........++.+ +++.++.|+
T Consensus 203 ~~~~~--~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 203 LSIED--GVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp EECSS--CEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEcCC--CcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 22111 11222222 57788888765 3688899887654322 110 111112223333 577777887
Q ss_pred CCCCCccceEEEEeCCCCCEEECCCCCC----------CCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 658 FNGMSRMCNGEKYNPVTKTWSQVPDMYN----------PRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~----------~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
.+ ..+..||..+..-......+. .......+.+ +++.++.|+.++ .+.+||..+.+
T Consensus 276 ~d-----~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-----~v~iwd~~~~~ 343 (393)
T 1erj_A 276 LD-----RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR-----GVLFWDKKSGN 343 (393)
T ss_dssp TT-----SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS-----EEEEEETTTCC
T ss_pred CC-----CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCe
Confidence 54 467788876532111100000 0001111222 567777887665 68889987754
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.22 E-value=1.7 Score=44.74 Aligned_cols=199 Identities=12% Similarity=0.008 Sum_probs=104.5
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEe-
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSL- 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~- 585 (824)
++.||+.+..+ ..+++||+.+++...+...+ ...-.+++.. ++.+|+.+... ......+++||+.+...+.
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCSCEEE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCCEEEEE
Confidence 56788776432 46999999998887654221 1222334433 67888875422 1122579999999887653
Q ss_pred ecCCCcccCceEEEEE-CCEEEEEcccC-CCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEecCCCC
Q psy17309 586 IAPMNVERSDASATTL-QGKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGM 661 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~ 661 (824)
+........-..++.- ++++|+..... .......++++|+.+.+...+..- .....+.+.. ++ .||+....
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~--- 202 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETT--- 202 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGG---
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCC---
Confidence 2322222222222222 67888864321 111235689999887766554210 0111222322 44 48877532
Q ss_pred CccceEEEEeCCC--CCEEECC-----CCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEe
Q psy17309 662 SRMCNGEKYNPVT--KTWSQVP-----DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 662 ~~~~~v~~yd~~~--~~W~~~~-----~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
...+++||+.+ .....+. ..+.. .......+ +++||+....+ ..+.+||++...-..
T Consensus 203 --~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~-----~~v~~~d~~g~~~~~ 268 (333)
T 2dg1_A 203 --ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQ-----GRVLVFNKRGYPIGQ 268 (333)
T ss_dssp --GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETT-----TEEEEECTTSCEEEE
T ss_pred --CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCC-----CEEEEECCCCCEEEE
Confidence 25788999854 2332211 11111 11222333 57788875322 268889986544333
No 189
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.17 E-value=0.81 Score=54.03 Aligned_cols=184 Identities=9% Similarity=0.053 Sum_probs=95.7
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++..+++|+.+ ..+..||..+++....-...... -.+++.. ++..+++||.+ ..+.+||..+.+....
T Consensus 24 ~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 24 TEPWVLTTLYS-----GRVEIWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVD 92 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEEecCCCc-EEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE
Confidence 34555666643 46889998887643322211111 1223332 56677777743 5788999888765332
Q ss_pred cCCCcccCce-EEEEE-CCEEEEEcccCCCCcCCceEEEeCCCC-eEEEcCCCCCCCcce-EEEEE--CCEEEEEecCCC
Q psy17309 587 APMNVERSDA-SATTL-QGKIYITGGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRRSGV-SCIAY--HECIYVIGGFNG 660 (824)
Q Consensus 587 ~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~ 660 (824)
- ....... +++.. ++..++.|+.+ ..+..||..++ ..... +....... +++.. ++..++.|+.+
T Consensus 93 ~--~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~~~d- 162 (814)
T 3mkq_A 93 F--EAHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALEQT--FEGHEHFVMCVAFNPKDPSTFASGCLD- 162 (814)
T ss_dssp E--ECCSSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEEEE--EECCSSCEEEEEEETTEEEEEEEEETT-
T ss_pred E--ecCCCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEEEE--EcCCCCcEEEEEEEcCCCCEEEEEeCC-
Confidence 1 1111112 22222 55566666654 46888888765 32221 11111122 22333 46677777754
Q ss_pred CCccceEEEEeCCCCC--EEECCCCCCCCcceEEEEE---CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 661 MSRMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 661 ~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
..+.+||..+.+ ...... .......++.. ++..+++|+.++ .+.+||..+.+
T Consensus 163 ----g~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~ 219 (814)
T 3mkq_A 163 ----RTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDL-----TIKIWDYQTKS 219 (814)
T ss_dssp ----SEEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEECTTS-----EEEEEETTTTE
T ss_pred ----CeEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCc
Confidence 468889986543 222111 11111222222 677888887655 57888877654
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.14 E-value=3.9 Score=47.32 Aligned_cols=246 Identities=7% Similarity=-0.003 Sum_probs=126.1
Q ss_pred CCceEEEEECCCCcEEEcccCC-CCCC-CceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce
Q psy17309 473 PTDFVETYDTRADRWVKIDQVD-PMGP-RAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY 548 (824)
Q Consensus 473 ~~~~~~~yd~~~~~W~~~~~~~-~~~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 548 (824)
....++..+.....|..+.... +... ........+ +++.++++-..++.....++.+|..+++......++....
T Consensus 92 ~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~- 170 (695)
T 2bkl_A 92 EKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKY- 170 (695)
T ss_dssp SSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTT-
T ss_pred eEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccc-
Confidence 3456777777666676642211 1101 111222222 5665555543333334689999999987641112221111
Q ss_pred EEEEE-ECCEEEEEecccCC--------CCCCeEEEEeCCCCcE--EeecCCCcc-cCceEEEEE-CCEEEEEcccCCCC
Q psy17309 549 VSTAV-HQDVIYAMGGYNGQ--------RRQNSVEKYNYTENQW--SLIAPMNVE-RSDASATTL-QGKIYITGGFNGHN 615 (824)
Q Consensus 549 ~~~~~-~~~~iyv~GG~~~~--------~~~~~~~~yd~~t~~W--~~~~~~p~~-r~~~~~~~~-~~~lyv~GG~~~~~ 615 (824)
...+. -+|+.++++..+.. .....+++++..+..- ..+...+.. ....+.... +|+..+++..++.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~- 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW- 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-
Confidence 22222 26666666654332 2345699999887652 223222222 222222222 5554444443321
Q ss_pred cCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC---EEECCCCCCCCcceEE
Q psy17309 616 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT---WSQVPDMYNPRSNFAI 692 (824)
Q Consensus 616 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~ 692 (824)
....++.+|..+..|+.+..-.... ...+..+|.+|+....+ .....++.+|+.+.. |+.+-+......-.++
T Consensus 250 ~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 250 SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 2356777887777787775422222 22233566666654322 224678999987654 8777432111222334
Q ss_pred EEECCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 693 EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 693 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
...+++|++....++ ...++++|+....-..+
T Consensus 326 ~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 326 SIVGGHLSLEYLKDA---TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EEETTEEEEEEEETT---EEEEEEEETTCCEEEEC
T ss_pred EEECCEEEEEEEECC---EEEEEEEeCCCCeeEEe
Confidence 445889888876544 34688888765544333
No 191
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.05 E-value=0.76 Score=48.97 Aligned_cols=147 Identities=10% Similarity=0.069 Sum_probs=74.9
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCceEEeccCCC-----CcceEEEEEE-C-CEEEEEecccCCCCCCeEEEEeCCCC
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF-----KRCYVSTAVH-Q-DVIYAMGGYNGQRRQNSVEKYNYTEN 581 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~-----~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd~~t~ 581 (824)
+.+++.|+.+ ..+..||..+.+-...-..+. ...-.+++.. + ..+++.|+.++. ...+.+||..+.
T Consensus 178 ~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~ 250 (416)
T 2pm9_A 178 AHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNA 250 (416)
T ss_dssp TTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTST
T ss_pred CcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCC
Confidence 5677777754 458999998876543322221 1122233333 2 357777765431 125778888774
Q ss_pred cEEeecCCC-cccCceEEEEE---CCEEEEEcccCCCCcCCceEEEeCCCCeEEEc-CCCCCCCcceEEEEE-CC-EEEE
Q psy17309 582 QWSLIAPMN-VERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPMRHRRSGVSCIAY-HE-CIYV 654 (824)
Q Consensus 582 ~W~~~~~~p-~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~-~~-~iyv 654 (824)
.- .+..+. ........+.+ ++.+++.|+.+ ..+..||..+.+-... .....+. .+++.. ++ .+++
T Consensus 251 ~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~v--~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 251 NT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-----NTVLLWNPESAEQLSQFPARGNWC--FKTKFAPEAPDLFA 322 (416)
T ss_dssp TS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-----SEEEEECSSSCCEEEEEECSSSCC--CCEEECTTCTTEEE
T ss_pred CC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCC-----CCEEEeeCCCCccceeecCCCCce--EEEEECCCCCCEEE
Confidence 31 112222 11122222222 57777888765 3588899877653221 1111111 112222 44 6777
Q ss_pred EecCCCCCccceEEEEeCCCC
Q psy17309 655 IGGFNGMSRMCNGEKYNPVTK 675 (824)
Q Consensus 655 ~GG~~~~~~~~~v~~yd~~~~ 675 (824)
.|+.+ ..+.+||..+.
T Consensus 323 s~~~d-----~~i~iw~~~~~ 338 (416)
T 2pm9_A 323 CASFD-----NKIEVQTLQNL 338 (416)
T ss_dssp ECCSS-----SEEEEEESCCC
T ss_pred EEecC-----CcEEEEEccCC
Confidence 77754 35667776543
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.04 E-value=6.4 Score=45.54 Aligned_cols=247 Identities=7% Similarity=-0.097 Sum_probs=125.5
Q ss_pred CCceEEEEECCCCcEEEcccC-CCCCCC-ceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce
Q psy17309 473 PTDFVETYDTRADRWVKIDQV-DPMGPR-AYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY 548 (824)
Q Consensus 473 ~~~~~~~yd~~~~~W~~~~~~-~~~~~r-~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 548 (824)
....++..+.....|..+-.. .+.... ........ +++.++++...++.....++.+|..+++........ ...
T Consensus 96 ~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~- 173 (710)
T 2xdw_A 96 NQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKF- 173 (710)
T ss_dssp SSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECS-
T ss_pred eEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-ccc-
Confidence 344566776666666543111 111111 11222222 555555554333333347999999999876542111 111
Q ss_pred EEEEEE-CCEEEEEecccCC-----------CCCCeEEEEeCCCCcEE--eecCCC-cccCceEEEEE-CCEEEEEcccC
Q psy17309 549 VSTAVH-QDVIYAMGGYNGQ-----------RRQNSVEKYNYTENQWS--LIAPMN-VERSDASATTL-QGKIYITGGFN 612 (824)
Q Consensus 549 ~~~~~~-~~~iyv~GG~~~~-----------~~~~~~~~yd~~t~~W~--~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~ 612 (824)
..++.. +++.++++..... .....++++++.+.+.+ .+...+ .+......... +|+..+++...
T Consensus 174 ~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE 253 (710)
T ss_dssp CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEc
Confidence 123333 5554444443322 22456899998887632 221222 12222233332 55544444332
Q ss_pred CCCcCCceEEEeCCC------C--eEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCC---CEEECC
Q psy17309 613 GHNCLNSCEVYDPEC------N--QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK---TWSQVP 681 (824)
Q Consensus 613 ~~~~~~~v~~yd~~~------~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~ 681 (824)
+....+.++.+|..+ . .+..+..-.... ......-++.||+.+..+ .....++.+|+.+. .|+.+.
T Consensus 254 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 254 GCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp SSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEE
T ss_pred cCCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCCcccceecc
Confidence 222246889999876 4 577765422222 122233467788887543 22457899998775 488774
Q ss_pred CCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCc-EEec
Q psy17309 682 DMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE-WYEA 727 (824)
Q Consensus 682 ~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~ 727 (824)
+-.....-.+++.. ++++++....++ ...++++|+.+++ ...+
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDLATGALLKIF 375 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETT---EEEEEEEETTTCCEEEEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECC---EEEEEEEECCCCCEEEec
Confidence 32211122334445 778888765543 3468899985554 3443
No 193
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.98 E-value=4.9 Score=43.41 Aligned_cols=149 Identities=11% Similarity=-0.034 Sum_probs=76.4
Q ss_pred CCEEEEEeecCCCcccceEEEEECC--CCceE-EeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAV--TKVWK-EIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~--~~~W~-~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
+..|++.|+.+ ..+..||.. +++.. .+.....+..-.+++.. ++..++.|+. ...++.++..+...
T Consensus 114 ~~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-----~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 114 ESRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-----FGDVYSIDINSIPE 183 (450)
T ss_dssp SSEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-----TSEEEEEETTSCCC
T ss_pred CCEEEEEECCC-----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-----CCcEEEEecCCccc
Confidence 34556777644 457888877 54432 22111111111223332 5666677764 25678888766543
Q ss_pred Ee--ecCCCcccCce-EEEE-EC---CEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEE
Q psy17309 584 SL--IAPMNVERSDA-SATT-LQ---GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVI 655 (824)
Q Consensus 584 ~~--~~~~p~~r~~~-~~~~-~~---~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~ 655 (824)
.. ...+....... +++. -+ +++++.|+.+ ..+..||..+.+....- +.........+.+ ++++++.
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~sd~~~l~s 257 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKW-LFGHKHFVSSICCGKDYLLLS 257 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEE-CCCCSSCEEEEEECSTTEEEE
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeee-ecCCCCceEEEEECCCCEEEE
Confidence 21 11121111111 2222 26 7788888765 46888888766533210 1111111122222 7778888
Q ss_pred ecCCCCCccceEEEEeCCCCCE
Q psy17309 656 GGFNGMSRMCNGEKYNPVTKTW 677 (824)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~~~W 677 (824)
|+.+ ..+.+||..+.+-
T Consensus 258 ~~~d-----~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 258 AGGD-----DKIFAWDWKTGKN 274 (450)
T ss_dssp EESS-----SEEEEEETTTCCE
T ss_pred EeCC-----CeEEEEECCCCcE
Confidence 8754 4788999887664
No 194
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=93.88 E-value=2.7 Score=39.63 Aligned_cols=140 Identities=7% Similarity=0.043 Sum_probs=82.6
Q ss_pred EEEECCEEEEEecccCCCCCCeEEEEeCCCC--cEEe--e----cCCCcccCceEEEEE---CCEEEEEcccCCCCcCCc
Q psy17309 551 TAVHQDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSL--I----APMNVERSDASATTL---QGKIYITGGFNGHNCLNS 619 (824)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~--~W~~--~----~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~ 619 (824)
++..+|++|+|=| +.+|+++.... .... + +.+|.. .-+|.. ++++|+|-| +.
T Consensus 12 i~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~---IDAa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 12 IAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK---LDSVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS---CSEEEECTTTCCEEEEET-------TE
T ss_pred EEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC---ccEEEEECCCCeEEEEeC-------CE
Confidence 4557999999988 67888887652 2221 1 345542 223332 688999987 45
Q ss_pred eEEEeCCCCe-EEEcC--CCCCC--CcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEE-----EC----CCCCC
Q psy17309 620 CEVYDPECNQ-WTLIE--PMRHR--RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS-----QV----PDMYN 685 (824)
Q Consensus 620 v~~yd~~~~~-W~~~~--~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~----~~~p~ 685 (824)
.++|+..+.. =..+. .+|.. ...++....++++|++-| +..++||..+++=. .+ +.+|
T Consensus 75 yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp- 146 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVP- 146 (195)
T ss_dssp EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSC-
T ss_pred EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCC-
Confidence 6777654211 11122 23331 233333323689999988 57899998764311 11 1222
Q ss_pred CCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 686 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 686 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
..--++...++++|++-|. ..+.||..+.+
T Consensus 147 -~~idaa~~~~g~~Yffkg~-------~y~~~~~~~~~ 176 (195)
T 1itv_A 147 -LDTHDVFQFREKAYFCQDR-------FYWRVSSRSEL 176 (195)
T ss_dssp -SSCSEEEEETTEEEEEETT-------EEEEEECCTTC
T ss_pred -CCCCEEEEeCCeEEEEeCC-------EEEEEECCccE
Confidence 2234555668999999764 68889987654
No 195
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=93.87 E-value=0.02 Score=48.58 Aligned_cols=55 Identities=18% Similarity=0.132 Sum_probs=46.6
Q ss_pred eeEEeeecccchhhhheeecccceecCHh-hHHHHHHHHhhcChHhHHHHHHHHHhh
Q psy17309 247 SVEKYNYTENQDKIEEKKLFERKLHITED-NVASLLLATDFFCMSKAQDLCCDFIKR 302 (824)
Q Consensus 247 ~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~-~v~~ll~~a~~~~i~~l~~~c~~~l~~ 302 (824)
++-+ |-++..|+.||+|+.+|++.+..+ ....+++-|++|+++.|++.|.+-|.+
T Consensus 51 ~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 51 AYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp CEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred eEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 3433 678999999999999999988654 358899999999999999999987754
No 196
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.84 E-value=1 Score=46.42 Aligned_cols=153 Identities=14% Similarity=0.098 Sum_probs=78.6
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CC-EEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
++.+|+.++.+ ..++++|+.+++....-+.+.....+.++.. ++ .+|+.+.. ...+.+||+.+.+-..
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEEE
Confidence 56778877643 5799999998876543333321012233333 44 57777642 3579999999887543
Q ss_pred ecCCCc-----ccCceEEEEE-CC-EEEEEccc---CCC---CcCCceEEEeCCCCeEEE-cCCCCCCCcceEEEE-ECC
Q psy17309 586 IAPMNV-----ERSDASATTL-QG-KIYITGGF---NGH---NCLNSCEVYDPECNQWTL-IEPMRHRRSGVSCIA-YHE 650 (824)
Q Consensus 586 ~~~~p~-----~r~~~~~~~~-~~-~lyv~GG~---~~~---~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~ 650 (824)
.-..+. ......++.. ++ .+|+.+.. ... .....+.+||+.+++-.. +...+.++...+++. -++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 322221 1112333333 44 55554421 000 012578899987743111 111111222222222 366
Q ss_pred EEEEEecCCCCCccceEEEEeCCCCCEE
Q psy17309 651 CIYVIGGFNGMSRMCNGEKYNPVTKTWS 678 (824)
Q Consensus 651 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 678 (824)
++|+.++ ++.++|+.+.+-.
T Consensus 160 ~l~~~~~--------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 160 SLYVAGP--------DIYKMDVKTGKYT 179 (349)
T ss_dssp CEEEESS--------SEEEECTTTCCEE
T ss_pred cEEEccC--------cEEEEeCCCCcee
Confidence 7777432 3888888776543
No 197
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.82 E-value=1.5 Score=44.80 Aligned_cols=140 Identities=16% Similarity=0.063 Sum_probs=72.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCC-ceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCC----cc
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPR-AYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK----RC 547 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r-~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----r~ 547 (824)
..+..+|+.+.+.... ...+... ..+.++.. +..+|+.++. ...++.+|+.+.+-...-..+.+ ..
T Consensus 11 ~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKV--ITIADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTTEEEEE--EECTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CeEEEEECCCCcEEEE--EEcCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 5688899988765431 1111100 11223333 3467777642 25699999988775432222110 01
Q ss_pred eEEEEEE-CC-EEEEEeccc---CCC---CCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CC-EEEEEcccCCCCcC
Q psy17309 548 YVSTAVH-QD-VIYAMGGYN---GQR---RQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGFNGHNCL 617 (824)
Q Consensus 548 ~~~~~~~-~~-~iyv~GG~~---~~~---~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~ 617 (824)
-..++.. ++ .+|+..... ... ....+.+||+.+.+....-+.+ .....++.. ++ .||+.+
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~-------- 153 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLG-------- 153 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEES--------
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeC--------
Confidence 1123332 34 677764211 011 2368999999887654322222 222233333 44 466652
Q ss_pred CceEEEeCCCCeEE
Q psy17309 618 NSCEVYDPECNQWT 631 (824)
Q Consensus 618 ~~v~~yd~~~~~W~ 631 (824)
..+..||+.+.+-.
T Consensus 154 ~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 154 RDLHVMDPEAGTLV 167 (337)
T ss_dssp SSEEEEETTTTEEE
T ss_pred CeEEEEECCCCcEe
Confidence 46899999887654
No 198
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.80 E-value=1.2 Score=47.37 Aligned_cols=150 Identities=11% Similarity=0.032 Sum_probs=77.4
Q ss_pred EEEEEeecCCCcccceEEEEECCCCceEEecc-CCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeec
Q psy17309 510 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP-MNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 587 (824)
Q Consensus 510 ~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~ 587 (824)
.+++.|+.+ ..+..||..+++....-. ......-.+++.. ++..++.|+.+ ..+.+||+.+.+-...-
T Consensus 145 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 145 NVLLSAGCD-----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCC-----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeee
Confidence 577777754 358899998876543221 1111222233332 66777777743 57899999887643221
Q ss_pred -CCC-cccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeE-EEcCCCCCCCcceEEEEE-C-CEEEEEecCCCCC
Q psy17309 588 -PMN-VERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW-TLIEPMRHRRSGVSCIAY-H-ECIYVIGGFNGMS 662 (824)
Q Consensus 588 -~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~ 662 (824)
... ..+....+..-++++++.|... .....+..||..+..- .....+.........+.. + ..|++.|+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~~g~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d--- 289 (402)
T 2aq5_A 215 DRPHEGTRPVHAVFVSEGKILTTGFSR--MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD--- 289 (402)
T ss_dssp ECSSCSSSCCEEEECSTTEEEEEEECT--TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC---
T ss_pred ccCCCCCcceEEEEcCCCcEEEEeccC--CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC---
Confidence 111 1112222222377877776211 1125788899876431 011111222222223323 3 4566666543
Q ss_pred ccceEEEEeCCCCC
Q psy17309 663 RMCNGEKYNPVTKT 676 (824)
Q Consensus 663 ~~~~v~~yd~~~~~ 676 (824)
..+.+||..+.+
T Consensus 290 --g~i~i~d~~~~~ 301 (402)
T 2aq5_A 290 --SSIRYFEITSEA 301 (402)
T ss_dssp --SCEEEEEECSST
T ss_pred --CeEEEEEecCCC
Confidence 467888887765
No 199
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.78 E-value=4.2 Score=40.96 Aligned_cols=223 Identities=9% Similarity=0.067 Sum_probs=103.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
+.|..+|..+++....-.... ....-.+++.. ++..++.|+.+ ..+..||..+++-........ .......
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~-~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~h~--~~~~~~~ 116 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSHS--ARVGSLS 116 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS--SCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecC-CCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCceeEEEecCcc--ceEEEee
Confidence 468999999887655211111 11122233333 66777888755 468889998876432222111 2223344
Q ss_pred ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEE-EECCEEEEEcccCCCCcCCceEEEeCCCCeEE-
Q psy17309 554 HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASAT-TLQGKIYITGGFNGHNCLNSCEVYDPECNQWT- 631 (824)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~- 631 (824)
.++.+.+.|+.+ ..+..++..+................... ..+++.++.|+.+ ..+..||..+.+-.
T Consensus 117 ~~~~~l~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 186 (318)
T 4ggc_A 117 WNSYILSSGSRS-----GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGW 186 (318)
T ss_dssp EETTEEEEEETT-----SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCBTTBS
T ss_pred cCCCEEEEEecC-----CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC-----cceeEEECCCCcccc
Confidence 455666666643 33445554443322111111111111111 2255666677655 35778888764311
Q ss_pred -EcCCCCCCCcc-eEEEEE--CCEE-EEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCC
Q psy17309 632 -LIEPMRHRRSG-VSCIAY--HECI-YVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFN 706 (824)
Q Consensus 632 -~~~~~p~~r~~-~~~~~~--~~~i-yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 706 (824)
........... .+.+.. ++.+ .+.+|.. ...+..+|.....-..................++.+++.+|..
T Consensus 187 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~ 262 (318)
T 4ggc_A 187 VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS----DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA 262 (318)
T ss_dssp CCSEEECCCCSCEEEEEECTTSTTEEEEEECTT----TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT
T ss_pred cceeeecccCCceEEEEecCCCCcEEEEEecCC----CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcC
Confidence 11111111111 112222 3333 3444432 2467788887765443322211111111112255666665543
Q ss_pred CCceeeEEEEEECCCCc
Q psy17309 707 GVTTIYHVECYDEKTDE 723 (824)
Q Consensus 707 ~~~~~~~v~~yd~~~~~ 723 (824)
.+ .+.+||..+.+
T Consensus 263 d~----~i~iwd~~~~~ 275 (318)
T 4ggc_A 263 QN----QLVIWKYPTMA 275 (318)
T ss_dssp TC----CEEEEETTTCC
T ss_pred CC----EEEEEECCCCc
Confidence 22 57889987653
No 200
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.75 E-value=1.2 Score=47.18 Aligned_cols=215 Identities=8% Similarity=0.048 Sum_probs=102.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE----CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce-E
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI----GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-V 549 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~ 549 (824)
..+..||..+.+-..... . .....++... ++.+++.|+.+ ..+..||..+.+-... +...... .
T Consensus 122 ~~i~iwd~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~~--~~~~~~~v~ 190 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFN--F--EETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSHI--LQGHRQEIL 190 (408)
T ss_dssp SEEEEEETTTTEEEEEEE--C--SSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCEE--ECCCCSCEE
T ss_pred CeEEEeeCCCCccceecc--C--CCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceeee--ecCCCCcEE
Confidence 468888888776544211 1 1111222222 33466777644 4588899887643211 1111111 2
Q ss_pred EEEEE-CC-EEEEEecccCCCCCCeEEEEeCCCCc--EEeec------------CCCcccCceEEEEE--CCEEEEEccc
Q psy17309 550 STAVH-QD-VIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIA------------PMNVERSDASATTL--QGKIYITGGF 611 (824)
Q Consensus 550 ~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~------------~~p~~r~~~~~~~~--~~~lyv~GG~ 611 (824)
+++.. ++ .+++.|+.+ ..+..||..+.. ...+. .............+ ++..++.|+.
T Consensus 191 ~~~~~~~~~~ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 191 AVSWSPRYDYILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp EEEECSSCTTEEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCCcEEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 23332 33 377777754 357888876543 11110 00111112222223 5666777775
Q ss_pred CCCCcCCceEEEeCCCCeEEEcCC-----CCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCC
Q psy17309 612 NGHNCLNSCEVYDPECNQWTLIEP-----MRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 686 (824)
Q Consensus 612 ~~~~~~~~v~~yd~~~~~W~~~~~-----~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 686 (824)
+ ..+..||..+.+-..... ..............+..+++++.+ ..+.+||..+.+-... +...
T Consensus 266 d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~v~d~~~~~~~~~--~~~~ 333 (408)
T 4a11_B 266 D-----NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG-----STIAVYTVYSGEQITM--LKGH 333 (408)
T ss_dssp T-----SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET-----TEEEEEETTTCCEEEE--ECCC
T ss_pred C-----CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC-----CEEEEEECcCCcceee--eccC
Confidence 5 368899988765322110 011111111112223334444432 4788899876553222 1111
Q ss_pred Ccce-EEEE-ECCEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 687 RSNF-AIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 687 r~~~-~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
.... +++. -++++++.||.++ .+.+||+.+.
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~ 366 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSRDC-----NILAWVPSLY 366 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEETTS-----CEEEEEECC-
T ss_pred CCeEEEEEEcCCCCEEEEECCCC-----eEEEEeCCCC
Confidence 1111 2222 2678888888765 5777887764
No 201
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.60 E-value=7 Score=39.64 Aligned_cols=204 Identities=4% Similarity=-0.038 Sum_probs=107.9
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEE
Q psy17309 474 TDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 552 (824)
Q Consensus 474 ~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 552 (824)
...+..+|+....-..+.. +..-+++++. ++.+|+...... ...++.+|+.+++...+...+..+.....+
T Consensus 52 ~~~I~~~d~~g~~~~~~~~-----~~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~ 123 (306)
T 2p4o_A 52 VGEIVSITPDGNQQIHATV-----EGKVSGLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTVETLLTLPDAIFLNGIT 123 (306)
T ss_dssp TTEEEEECTTCCEEEEEEC-----SSEEEEEEECTTSCEEEEEECTT---SCEEEEEECTTSCEEEEEECTTCSCEEEEE
T ss_pred CCeEEEECCCCceEEEEeC-----CCCceeEEEcCCCcEEEEeccCC---cceEEEEcCCCCeEEEEEeCCCccccCccc
Confidence 3468888887643222111 1233445544 567888764211 125888999998887776655545444444
Q ss_pred EE-CCEEEEEecccCCCCCCeEEEEeCCCCc---EEeecC----CCc-c-cCceEEEEECCEEEEEcccCCCCcCCceEE
Q psy17309 553 VH-QDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAP----MNV-E-RSDASATTLQGKIYITGGFNGHNCLNSCEV 622 (824)
Q Consensus 553 ~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~---W~~~~~----~p~-~-r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~ 622 (824)
.. ++.+|+.-. ....++++|+.+.. |..-+. .+. . ....++..-++.||+.-- ..+.+.+
T Consensus 124 ~~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~-----~~~~I~~ 193 (306)
T 2p4o_A 124 PLSDTQYLTADS-----YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT-----EKMLLLR 193 (306)
T ss_dssp ESSSSEEEEEET-----TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET-----TTTEEEE
T ss_pred ccCCCcEEEEEC-----CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC-----CCCEEEE
Confidence 33 556777532 23589999987642 211111 111 1 112223223568998742 2367899
Q ss_pred EeCCC-CeE---EEcCCCCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEEC-
Q psy17309 623 YDPEC-NQW---TLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVID- 696 (824)
Q Consensus 623 yd~~~-~~W---~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~- 696 (824)
||+.. .+. +....+..|+ +++.- +|+||+.-.. .+.|.+||+. .+...+...+.+-.....++++
T Consensus 194 ~~~~~~g~~~~~~~~~~~~~P~---gi~vd~dG~l~va~~~-----~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 194 IPVDSTDKPGEPEIFVEQTNID---DFAFDVEGNLYGATHI-----YNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp EEBCTTSCBCCCEEEEESCCCS---SEEEBTTCCEEEECBT-----TCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred EEeCCCCCCCccEEEeccCCCC---CeEECCCCCEEEEeCC-----CCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 99864 221 1111121121 23333 6889988643 2578999986 4444332222232334444443
Q ss_pred -----CEEEEEcc
Q psy17309 697 -----DMIFAIGG 704 (824)
Q Consensus 697 -----~~i~v~GG 704 (824)
+.|||...
T Consensus 265 ~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 265 TEGDCTAIYVVTN 277 (306)
T ss_dssp STTTTTEEEEEEC
T ss_pred ccCCCCEEEEECC
Confidence 57888754
No 202
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.56 E-value=5.8 Score=40.81 Aligned_cols=137 Identities=10% Similarity=0.123 Sum_probs=71.8
Q ss_pred eEEEEECCCCcEE-EcccCCCC-CCCceeEEEEE-C----CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce
Q psy17309 476 FVETYDTRADRWV-KIDQVDPM-GPRAYHGTAVI-G----YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY 548 (824)
Q Consensus 476 ~~~~yd~~~~~W~-~~~~~~~~-~~r~~~~~~~~-~----~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 548 (824)
.+..||..+.+.. .+.....+ ....-.+++.. + +.+++.|+.+ ..+..||..+.+-...-.- ....-
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~-~~~~i 118 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR-----GIIRIINPITMQCIKHYVG-HGNAI 118 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT-----CEEEEECTTTCCEEEEEES-CCSCE
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC-----CEEEEEEchhceEeeeecC-CCCcE
Confidence 5788887755432 22111111 12223333333 3 5788888754 4688999887653221111 11112
Q ss_pred EEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEee-cCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEE
Q psy17309 549 VSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVY 623 (824)
Q Consensus 549 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~-~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~y 623 (824)
.+++.. ++.+++.|+.+ ..+..||..+.+-... ..+.........+.+ ++..++.|+.+ ..+..|
T Consensus 119 ~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~ 188 (366)
T 3k26_A 119 NELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLW 188 (366)
T ss_dssp EEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEE
T ss_pred EEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-----CCEEEE
Confidence 223332 56777887754 4588999988764332 222222222223332 46667777755 367888
Q ss_pred eCCCC
Q psy17309 624 DPECN 628 (824)
Q Consensus 624 d~~~~ 628 (824)
|..+.
T Consensus 189 d~~~~ 193 (366)
T 3k26_A 189 RINSK 193 (366)
T ss_dssp ESCSH
T ss_pred ECCCC
Confidence 88764
No 203
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.54 E-value=3.7 Score=41.86 Aligned_cols=187 Identities=10% Similarity=0.121 Sum_probs=93.0
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCce---EEeccCCCCcceE-EEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVW---KEIAPMNFKRCYV-STAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W---~~~~~~~~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
+.+++.||.++ .+..||+.+..- .....+....... +++.. ++.+++.|+.+ ..+..++......
T Consensus 51 ~~~l~S~s~D~-----~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d-----~~i~~~~~~~~~~ 120 (340)
T 4aow_A 51 PDMILSASRDK-----TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD-----GTLRLWDLTTGTT 120 (340)
T ss_dssp TTEEEEEETTS-----CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred CCEEEEEcCCC-----eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc-----ccceEEeecccce
Confidence 45777787653 467777655432 1222221111111 22222 56777777754 4577777777665
Q ss_pred EeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE----CCEEEEEecCC
Q psy17309 584 SLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY----HECIYVIGGFN 659 (824)
Q Consensus 584 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~ 659 (824)
...................+..++.|+.+ ..+..||.....-..... .........+.+ .+.+++.|+.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~s~~~d 194 (340)
T 4aow_A 121 TRRFVGHTKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWD 194 (340)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECS-SSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred eeeecCCCCceeEEEEeecCccceeecCC-----CeEEEEEeCCCceEEEEe-ccccCcccceEEccCCCCcEEEEEcCC
Confidence 44332222222222222245566666654 346677776544322221 111122222222 24466666653
Q ss_pred CCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 660 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
..+..||..+.+-...-. .......++.+ ++++++.|+.++ .+.+||..+..
T Consensus 195 -----~~i~i~d~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~Dg-----~i~iwd~~~~~ 248 (340)
T 4aow_A 195 -----KLVKVWNLANCKLKTNHI--GHTGYLNTVTVSPDGSLCASGGKDG-----QAMLWDLNEGK 248 (340)
T ss_dssp -----SCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTTE
T ss_pred -----CEEEEEECCCCceeeEec--CCCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEeccCc
Confidence 457888987765433211 11111222233 678888888765 57788887654
No 204
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.52 E-value=5.8 Score=42.31 Aligned_cols=224 Identities=12% Similarity=0.096 Sum_probs=105.9
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEe
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 539 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 539 (824)
+..++.|+. ...+..||..+.+-... ... ......+...++.+++.|+.+ ..+..+|..+......
T Consensus 159 g~~lasgs~-----Dg~v~iWd~~~~~~~~~--~~~--h~~~v~~~s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~ 224 (420)
T 4gga_A 159 GNYLAVGTS-----SAEVQLWDVQQQKRLRN--MTS--HSARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVA 224 (420)
T ss_dssp SSEEEEEET-----TSCEEEEETTTTEEEEE--ECC--CSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred CCEEEEEEC-----CCeEEEEEcCCCcEEEE--EeC--CCCceEEEeeCCCEEEEEeCC-----CceeEeeecccceeeE
Confidence 445566653 24588899888765432 111 112223334466677777754 4567777765443211
Q ss_pred ccCCCCcc-eEEEE-EECCEEEEEecccCCCCCCeEEEEeCCCCc--EEeecCCCcccCce-EEEEE--CCEEEEE-ccc
Q psy17309 540 APMNFKRC-YVSTA-VHQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVERSDA-SATTL--QGKIYIT-GGF 611 (824)
Q Consensus 540 ~~~~~~r~-~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~-~~~~~--~~~lyv~-GG~ 611 (824)
.+..... ...+. ..++..++.|+.+ +.+.++|..+.+ +..+.......... +.+.. +..+++. ||.
T Consensus 225 -~~~~h~~~~~~~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 225 -TLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp -EEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred -EecccccceeeeeecCCCCeeeeeecc-----ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec
Confidence 1111111 11122 2255666666643 346667765543 11111111111111 12222 3444444 443
Q ss_pred CCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcc
Q psy17309 612 NGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN 689 (824)
Q Consensus 612 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 689 (824)
.+ ..+..||..+++-...-.... ...+.+.. ++.+++.+|.. ...+.+||..+.+ .+..+......
T Consensus 299 ~D----~~I~iwd~~t~~~~~~~~~~~--~v~~~~~~~~~~~lv~~sg~~----d~~I~iwd~~~~~--~v~~l~gH~~~ 366 (420)
T 4gga_A 299 SD----RHIRIWNVCSGACLSAVDAHS--QVCSILWSPHYKELISGHGFA----QNQLVIWKYPTMA--KVAELKGHTSR 366 (420)
T ss_dssp TT----CEEEEEETTTTEEEEEEECSS--CEEEEEEETTTTEEEEEECTT----TCCEEEEETTTCC--EEEEECCCSSC
T ss_pred CC----CEEEEEeCCccccceeecccc--ceeeeeecCCCCeEEEEEecC----CCEEEEEECCCCc--EEEEEcCCCCC
Confidence 22 468889998876443322111 12222222 45555555542 2468889987654 22222211111
Q ss_pred eEEEEE--CCEEEEEccCCCCceeeEEEEEECC
Q psy17309 690 FAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 720 (824)
Q Consensus 690 ~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 720 (824)
...+.+ +++.++.||.++ .|.+||..
T Consensus 367 V~~l~~spdg~~l~S~s~D~-----tvriWdv~ 394 (420)
T 4gga_A 367 VLSLTMSPDGATVASAAADE-----TLRLWRCF 394 (420)
T ss_dssp EEEEEECTTSSCEEEEETTT-----EEEEECCS
T ss_pred EEEEEEcCCCCEEEEEecCC-----eEEEEECC
Confidence 222233 778888888776 56677654
No 205
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.52 E-value=2 Score=42.71 Aligned_cols=185 Identities=6% Similarity=-0.092 Sum_probs=100.3
Q ss_pred cceEEEEECCCCceEEeccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCC-CcEEeecCCCcccCceEEE-
Q psy17309 523 YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIAPMNVERSDASAT- 599 (824)
Q Consensus 523 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t-~~W~~~~~~p~~r~~~~~~- 599 (824)
...++.+|+.+++...+...+. .-.+++. -+++.+++++ ...++++|+.+ .+...+........-..++
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS--CCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred ceeEEEEeCCCCceeeeccCCc--ceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 4678999999988765543321 1122222 2566666664 24799999998 7766654333212212222
Q ss_pred EECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecCCCCCccceEEEEeCCCCCE
Q psy17309 600 TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCNGEKYNPVTKTW 677 (824)
Q Consensus 600 ~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W 677 (824)
.-+++.+++++.... ....++.+|..+.....+..... ....+.. +++ |++.++.++ ...++.+|..+...
T Consensus 93 spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~---~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 93 SPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ---VFDIYSMDIDSGVE 165 (297)
T ss_dssp CTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT---EEEEEEEETTTCCE
T ss_pred CCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC---ceEEEEEECCCCcc
Confidence 235666666553321 24678888887776555543221 2222222 444 554554332 23677778887777
Q ss_pred EECCCCCCCCcceEEEEE--CCE-EEEEccCCCCceeeEEEEEECCCCcEEecc
Q psy17309 678 SQVPDMYNPRSNFAIEVI--DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 678 ~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (824)
..+...+.. .....+ +++ |++.+..++ ...++.+++.+.....+.
T Consensus 166 ~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 166 TRLTHGEGR---NDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp EECCCSSSC---EEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECC
T ss_pred eEcccCCCc---cccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEe
Confidence 666543221 122222 555 444443333 246888888777776653
No 206
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.49 E-value=2.1 Score=44.14 Aligned_cols=227 Identities=8% Similarity=0.092 Sum_probs=112.5
Q ss_pred EEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-C---CEEEEEeecCCCcccceEEEEECCCCc-
Q psy17309 461 ILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-G---YNIYVIGGFDGNEYYNSCRCFNAVTKV- 535 (824)
Q Consensus 461 ~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~---~~lyv~GG~~~~~~~~~~~~yd~~~~~- 535 (824)
.+++.|+.. .....+..||..+.+...+... .....-.+++.. + +.+++.|+.+ ..+..||..+.+
T Consensus 32 ~l~~~~s~~--~~d~~v~iw~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~ 102 (357)
T 3i2n_A 32 KFVTMGNFA--RGTGVIQLYEIQHGDLKLLREI--EKAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEM 102 (357)
T ss_dssp EEEEEEC----CCCEEEEEEEECSSSEEEEEEE--EESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSS
T ss_pred eEEEecCcc--CCCcEEEEEeCCCCcccceeee--cccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCc
Confidence 566666531 1134688888888776542111 111112222222 2 4777777754 358888888764
Q ss_pred -eEEeccCCCCcceEEEEE-------ECCEEEEEecccCCCCCCeEEEEeCCCCc--EEeecCCCc--ccCceEEEE---
Q psy17309 536 -WKEIAPMNFKRCYVSTAV-------HQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNV--ERSDASATT--- 600 (824)
Q Consensus 536 -W~~~~~~~~~r~~~~~~~-------~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~p~--~r~~~~~~~--- 600 (824)
-..+.....+ -.++.. .++..++.|+.+ ..+.+||+.+.. ...+..... .+.-.+++.
T Consensus 103 ~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 103 PVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp CSEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC
T ss_pred cEEEEEecccc--eEEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec
Confidence 2222211111 112221 256677777753 458888988764 233322221 112222221
Q ss_pred --ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE----CCEEEEEecCCCCCccceEEEEeCCC
Q psy17309 601 --LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY----HECIYVIGGFNGMSRMCNGEKYNPVT 674 (824)
Q Consensus 601 --~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~ 674 (824)
-++.+++.|+.+ ..+..||..+.+-....... ..-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 176 ~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 243 (357)
T 3i2n_A 176 YNQEERVVCAGYDN-----GDIKLFDLRNMALRWETNIK--NGVCSLEFDRKDISMNKLVATSLE-----GKFHVFDMRT 243 (357)
T ss_dssp CC-CCCEEEEEETT-----SEEEEEETTTTEEEEEEECS--SCEEEEEESCSSSSCCEEEEEEST-----TEEEEEEEEE
T ss_pred cCCCCCEEEEEccC-----CeEEEEECccCceeeecCCC--CceEEEEcCCCCCCCCEEEEECCC-----CeEEEEeCcC
Confidence 367777777654 46889999887643332222 122223333 56777777654 4577777654
Q ss_pred CCEEECCCC------CCCCcceEEEEE-CCE-EEEEccCCCCceeeEEEEEECCCC
Q psy17309 675 KTWSQVPDM------YNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 675 ~~W~~~~~~------p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
.+ .+..+ .....-.+++.. ++. +++.|+.++ .+.+||..+.
T Consensus 244 ~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~ 292 (357)
T 3i2n_A 244 QH--PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG-----GLHLWKYEYP 292 (357)
T ss_dssp EE--TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-----EEEEEEEECC
T ss_pred CC--cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC-----cEEEeecCCC
Confidence 21 11111 111111222223 455 788887765 5777776543
No 207
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.46 E-value=8.2 Score=39.96 Aligned_cols=116 Identities=9% Similarity=0.030 Sum_probs=59.3
Q ss_pred CC-EEEEEcccCCCCcCCceEEEeCCCCeEEEcC---CCCCCCcceEEEEE--CCE-EEEEecCCCCCccceEEEEeC--
Q psy17309 602 QG-KIYITGGFNGHNCLNSCEVYDPECNQWTLIE---PMRHRRSGVSCIAY--HEC-IYVIGGFNGMSRMCNGEKYNP-- 672 (824)
Q Consensus 602 ~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~-- 672 (824)
++ .+|+.+.. .+.+.+||..+++++.+. ..+........+.+ +++ ||+..... .+.+.+|+.
T Consensus 221 dg~~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~----~~~i~v~~~~~ 291 (361)
T 3scy_A 221 DGKFAYLINEI-----GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK----ADGVAIFKVDE 291 (361)
T ss_dssp TSSEEEEEETT-----TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS----SCEEEEEEECT
T ss_pred CCCEEEEEcCC-----CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC----CCEEEEEEEcC
Confidence 44 57776532 256888988887775543 33332233333334 454 66654320 134556555
Q ss_pred CCCCEEECCCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCcEEecc
Q psy17309 673 VTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 673 ~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (824)
.+.+++.+...+....-..++.- +++.+++++...+ .-.++.+|+++.+-+.+.
T Consensus 292 ~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~--~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 292 TNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTN--VIQIFERDQATGLLTDIK 346 (361)
T ss_dssp TTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTT--EEEEEEECTTTCCEEECS
T ss_pred CCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCC--CEEEEEEECCCCcEeecc
Confidence 56777666544332111223222 5554444433222 224566788888777664
No 208
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.46 E-value=0.85 Score=47.27 Aligned_cols=187 Identities=11% Similarity=0.120 Sum_probs=95.2
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-C---CEEEEEecccCCCCCCeEEEEeCCCCc--
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-Q---DVIYAMGGYNGQRRQNSVEKYNYTENQ-- 582 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~yd~~t~~-- 582 (824)
..+++.|+.+. ....+..||..+++............-.+++.. + +.+++.|+.+ ..+..||..+..
T Consensus 31 ~~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~ 103 (357)
T 3i2n_A 31 AKFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEMP 103 (357)
T ss_dssp SEEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSSC
T ss_pred ceEEEecCccC--CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCcc
Confidence 35666665311 125688899888776544332222222233332 2 4777777754 458888887764
Q ss_pred EEeecCCCcccCceEEE-------EECCEEEEEcccCCCCcCCceEEEeCCCCe--EEEcCCCCC--CCcceEEEE----
Q psy17309 583 WSLIAPMNVERSDASAT-------TLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRH--RRSGVSCIA---- 647 (824)
Q Consensus 583 W~~~~~~p~~r~~~~~~-------~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~~---- 647 (824)
-..+.....+ -.++. .-++..++.|+.+ ..+..||..+.. ...+..... .+...+++.
T Consensus 104 ~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 104 VYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp SEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred EEEEEecccc--eEEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 1122111111 11111 1246667777754 368889887754 333332222 112222221
Q ss_pred -ECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE----CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 648 -YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 648 -~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
-++.+++.|+.+ ..+..||..+.+-...... ...-.+++.. ++..+++|+.++ .+.+||..+
T Consensus 177 ~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~ 243 (357)
T 3i2n_A 177 NQEERVVCAGYDN-----GDIKLFDLRNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLEG-----KFHVFDMRT 243 (357)
T ss_dssp C-CCCEEEEEETT-----SEEEEEETTTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEESTT-----EEEEEEEEE
T ss_pred CCCCCEEEEEccC-----CeEEEEECccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCCC-----eEEEEeCcC
Confidence 367777777753 4788999887653322111 1112223322 567777777655 566777654
No 209
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.29 E-value=0.83 Score=48.37 Aligned_cols=189 Identities=6% Similarity=0.086 Sum_probs=95.8
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEecc------C-----C-CCcceEEEEEE--CCEEEEEecccCCCCCCeE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP------M-----N-FKRCYVSTAVH--QDVIYAMGGYNGQRRQNSV 573 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~------~-----~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 573 (824)
++.+++.|+.+ ..+..||..+........ . . ....-.+++.. ++.+++.|+.+ ..+
T Consensus 55 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i 124 (408)
T 4a11_B 55 EGRYMLSGGSD-----GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD-----KTL 124 (408)
T ss_dssp TCCEEEEEETT-----SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-----SEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-----CeE
Confidence 35566677654 357888887654321110 0 0 11111223332 45577777643 568
Q ss_pred EEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--C
Q psy17309 574 EKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H 649 (824)
Q Consensus 574 ~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 649 (824)
..||..+.+-...-..+.+......... ++.+++.|+.+ ..+..||..+.+-.. .+........++.+ +
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~--~~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 125 KVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSH--ILQGHRQEILAVSWSPR 197 (408)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCE--EECCCCSCEEEEEECSS
T ss_pred EEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceee--eecCCCCcEEEEEECCC
Confidence 8999988765444333322211111111 34467777654 468889987654221 11212222223333 3
Q ss_pred CE-EEEEecCCCCCccceEEEEeCCCCC--EEECCC------------CCCCCcceEEEEE--CCEEEEEccCCCCceee
Q psy17309 650 EC-IYVIGGFNGMSRMCNGEKYNPVTKT--WSQVPD------------MYNPRSNFAIEVI--DDMIFAIGGFNGVTTIY 712 (824)
Q Consensus 650 ~~-iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~------------~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~ 712 (824)
+. +++.|+.+ ..+..||..+.. ...+.. ..........+.+ +++.++.|+.++
T Consensus 198 ~~~ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----- 267 (408)
T 4a11_B 198 YDYILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN----- 267 (408)
T ss_dssp CTTEEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCcEEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCC-----
Confidence 33 77788754 457888886543 122110 0111112222333 677777887665
Q ss_pred EEEEEECCCCc
Q psy17309 713 HVECYDEKTDE 723 (824)
Q Consensus 713 ~v~~yd~~~~~ 723 (824)
.+.+||..+.+
T Consensus 268 ~i~vwd~~~~~ 278 (408)
T 4a11_B 268 RMRLWNSSNGE 278 (408)
T ss_dssp CEEEEETTTCC
T ss_pred eEEEEECCCCc
Confidence 58889988754
No 210
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=93.27 E-value=10 Score=42.54 Aligned_cols=237 Identities=9% Similarity=-0.038 Sum_probs=124.4
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEE-cccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECC--CC
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVK-IDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAV--TK 534 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~--~~ 534 (824)
+.+++... ..+.+..+|+.+.+-.. ++ ....-|++++. +..+|+.+. ...+..+|+. +.
T Consensus 167 ~~~~V~~~-----~~~~V~viD~~t~~v~~~i~-----~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~ 230 (567)
T 1qks_A 167 NLFSVTLR-----DAGQIALIDGSTYEIKTVLD-----TGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEP 230 (567)
T ss_dssp GEEEEEET-----TTTEEEEEETTTCCEEEEEE-----CSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSC
T ss_pred ceEEEEeC-----CCCeEEEEECCCCeEEEEEe-----CCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCC
Confidence 35555543 34578999999886543 22 22233455544 567787542 2479999995 44
Q ss_pred ceEEeccCCCCcceEEEEEE-----CC-EEEEEecccCCCCCCeEEEEeCCCCcEEe-ec--CC--------CcccCceE
Q psy17309 535 VWKEIAPMNFKRCYVSTAVH-----QD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL-IA--PM--------NVERSDAS 597 (824)
Q Consensus 535 ~W~~~~~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~-~~--~~--------p~~r~~~~ 597 (824)
+ .+..++....-..++.. +| .+|+..-. .+.+.++|..+.+=.. ++ .+ |.+|....
T Consensus 231 ~--~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 231 T--TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp C--EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred c--EeEEEecCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEE
Confidence 3 23333332222334443 44 66666432 3678888977755322 11 11 12232222
Q ss_pred EEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecCCCCCccceEEEEeCCCC
Q psy17309 598 ATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCNGEKYNPVTK 675 (824)
Q Consensus 598 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~ 675 (824)
.+..++..+++-= .....+...|..+.....+..++..+..|....- +++ +|+.... .+.|.++|.++.
T Consensus 304 ~~s~~~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~-----sn~V~ViD~~t~ 374 (567)
T 1qks_A 304 LASHYRPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA-----RNKLVVIDTKEG 374 (567)
T ss_dssp EECSSSSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG-----GTEEEEEETTTT
T ss_pred EEcCCCCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC-----CCeEEEEECCCC
Confidence 2222333333211 1235678888777655555545555655555443 444 4444332 478999999987
Q ss_pred CEE---EC-CCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCc-----EEeccCCCC
Q psy17309 676 TWS---QV-PDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE-----WYEATDMNI 732 (824)
Q Consensus 676 ~W~---~~-~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~-----W~~~~~~p~ 732 (824)
+=. .+ ...|.|..+.....- ++.+|+.+-... ..|-++|.++.. |+.+..++.
T Consensus 375 kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~----~~Vsvid~~~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 375 KLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGD----DSVALIGTDPEGHPDNAWKILDSFPA 437 (567)
T ss_dssp EEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEEC
T ss_pred cEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCC----CeEEEecCCCCCCccccCEEEEEEec
Confidence 532 23 344555333333222 367887753221 257788877633 887755443
No 211
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.22 E-value=2.7 Score=43.02 Aligned_cols=187 Identities=8% Similarity=0.037 Sum_probs=94.6
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 587 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~ 587 (824)
++..++.|+.+ ..+..++........................++..++.|+.+ ..+..+|.....-....
T Consensus 97 dg~~l~s~~~d-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 97 DGQFALSGSWD-----GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEEC
T ss_pred CCCEEEEEccc-----ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-----CeEEEEEeCCCceEEEE
Confidence 56677777754 357778877766544333322222222222345666666643 34667776654432222
Q ss_pred CCCcccCceEEEEE----CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCC
Q psy17309 588 PMNVERSDASATTL----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGM 661 (824)
Q Consensus 588 ~~p~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 661 (824)
.... ......+.+ .+.+++.||.+ ..+..||..+.+....-. .......++.+ ++++++.|+.+
T Consensus 167 ~~~~-~~~v~~~~~~~~~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~D-- 236 (340)
T 4aow_A 167 DESH-SEWVSCVRFSPNSSNPIIVSCGWD-----KLVKVWNLANCKLKTNHI--GHTGYLNTVTVSPDGSLCASGGKD-- 236 (340)
T ss_dssp SSSC-SSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT--
T ss_pred eccc-cCcccceEEccCCCCcEEEEEcCC-----CEEEEEECCCCceeeEec--CCCCcEEEEEECCCCCEEEEEeCC--
Confidence 1111 111222222 23456666654 457889988776433221 11122223333 67788888764
Q ss_pred CccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 662 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 662 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
..+.+||..+.+-.. .+........++...+..++.|+.++ .+.+||.++..-
T Consensus 237 ---g~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~d~-----~i~iwd~~~~~~ 289 (340)
T 4aow_A 237 ---GQAMLWDLNEGKHLY--TLDGGDIINALCFSPNRYWLCAATGP-----SIKIWDLEGKII 289 (340)
T ss_dssp ---CEEEEEETTTTEEEE--EEECSSCEEEEEECSSSSEEEEEETT-----EEEEEETTTTEE
T ss_pred ---CeEEEEEeccCceee--eecCCceEEeeecCCCCceeeccCCC-----EEEEEECCCCeE
Confidence 467888887654222 11111122223333444555666543 578888877643
No 212
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.20 E-value=15 Score=42.16 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=36.9
Q ss_pred ceEEEEECCCCc--EEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCc--eEEe
Q psy17309 475 DFVETYDTRADR--WVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEI 539 (824)
Q Consensus 475 ~~~~~yd~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~ 539 (824)
..+.++|..+.+ |..-............+-++.++.||+..+.........++.||+.+++ |+.-
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 468899987764 7652111111111222334568888875432111234679999999877 8753
No 213
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.17 E-value=5.1 Score=41.23 Aligned_cols=184 Identities=11% Similarity=0.106 Sum_probs=94.5
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcc-eEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRC-YVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
+.+++.|+.+ ..+..||..+........+..... -.+++.. ++..++.|+.+ ..+.+||..+.+....
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 4788888754 358888887633322121211111 1222322 56667777643 4788999998876554
Q ss_pred cCCCcccCceEEEE---ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCc
Q psy17309 587 APMNVERSDASATT---LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSR 663 (824)
Q Consensus 587 ~~~p~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 663 (824)
.....+ -.+++. -++.+++.|+.+ ..+..||..+.+-.. .+.......+.....+.+++.++
T Consensus 124 ~~~~~~--v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------ 188 (368)
T 3mmy_A 124 AQHDAP--VKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPMM--VLQLPERCYCADVIYPMAVVATA------ 188 (368)
T ss_dssp EECSSC--EEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCSE--EEECSSCEEEEEEETTEEEEEEG------
T ss_pred ccccCc--eEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEEE--EEecCCCceEEEecCCeeEEEeC------
Confidence 322211 222232 267778888765 368888887654211 11112223333444555555444
Q ss_pred cceEEEEeCCCCC--EEECCCCCCCCcceEEEEEC----CEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 664 MCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEVID----DMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 664 ~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~----~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
...+..||..... +..+...............+ ...++.|+.++ .+.+||..+.
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg-----~i~i~~~~~~ 248 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG-----RVAIHYINPP 248 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS-----EEEEEESSCS
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC-----cEEEEecCCC
Confidence 2467788876543 34433221111111112222 23367776654 5777887665
No 214
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.15 E-value=10 Score=40.12 Aligned_cols=232 Identities=10% Similarity=0.063 Sum_probs=123.4
Q ss_pred eEEEEECCCCcEEEcccCC-CCC--CC-------ceeEEEEE----CCEEEEEeecCCCcccceEEEEECCCCceEEecc
Q psy17309 476 FVETYDTRADRWVKIDQVD-PMG--PR-------AYHGTAVI----GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP 541 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~-~~~--~r-------~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 541 (824)
.++..+....+|..+.... .+. .+ .-.++++. .+.||+.+. ...+++.+-...+|+.+..
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~ 155 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAG 155 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHH
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcC
Confidence 5677777778999865321 111 11 11233333 466776542 1458888888889998754
Q ss_pred C---CC--------------CcceEEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecC------CCcc---
Q psy17309 542 M---NF--------------KRCYVSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP------MNVE--- 592 (824)
Q Consensus 542 ~---~~--------------~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~------~p~~--- 592 (824)
. |. ....++++.. .+.||+..+. ..+++.+-...+|+.+.. +|.+
T Consensus 156 ~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~ 229 (394)
T 3b7f_A 156 FNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVE 229 (394)
T ss_dssp HHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSS
T ss_pred ccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccc
Confidence 2 21 1122344433 3578876432 247788778889998753 1211
Q ss_pred --cCceEEEEE-C--CEEEEEcccCCCCcCCceEEEeCCCCeEEEcCC-CCCC--CcceEEEEE---CCEEEEEecCCCC
Q psy17309 593 --RSDASATTL-Q--GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP-MRHR--RSGVSCIAY---HECIYVIGGFNGM 661 (824)
Q Consensus 593 --r~~~~~~~~-~--~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~--r~~~~~~~~---~~~iyv~GG~~~~ 661 (824)
...++++.. . +.||+..+ ..+++.+-...+|+.+.. +|.. ......+.. .+.||+.......
T Consensus 230 ~g~~~~~i~~~~~~~~~l~vg~~-------~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~ 302 (394)
T 3b7f_A 230 FGHDPHCVVQHPAAPDILYQQNH-------CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSD 302 (394)
T ss_dssp SCBCEEEEEECSSSTTEEEEEET-------TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCS
T ss_pred cCcceeEEEECCCCCCEEEEEcC-------CeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCc
Confidence 223444443 2 67777432 347888888899999864 5542 222333332 4678886421110
Q ss_pred -------CccceEEEEeCCCCCEEECC-CCCCCCc-----ceEEEEE--C-CEEEEEccCCCCceeeEEEEEECCCCcEE
Q psy17309 662 -------SRMCNGEKYNPVTKTWSQVP-DMYNPRS-----NFAIEVI--D-DMIFAIGGFNGVTTIYHVECYDEKTDEWY 725 (824)
Q Consensus 662 -------~~~~~v~~yd~~~~~W~~~~-~~p~~r~-----~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (824)
.....+++-.-...+|+.+. .+|.... ..+++.. + +.||+ |+..+ .+++-+-...+|+
T Consensus 303 ~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~-g~~~g-----~l~~S~D~G~tW~ 376 (394)
T 3b7f_A 303 VWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYF-GTTGG-----EIWASADEGEHWQ 376 (394)
T ss_dssp STTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEE-ECTTS-----CEEEESSTTSBCE
T ss_pred cceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEE-EeCCC-----eEEEECCCCCCce
Confidence 01123444433447899885 3454211 1223332 3 44665 43222 3555555567899
Q ss_pred ecc-CCCC
Q psy17309 726 EAT-DMNI 732 (824)
Q Consensus 726 ~~~-~~p~ 732 (824)
.+. .+|.
T Consensus 377 ~~~~~lp~ 384 (394)
T 3b7f_A 377 CIASHLPH 384 (394)
T ss_dssp EEECSCSC
T ss_pred EcccCCCC
Confidence 984 4554
No 215
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.14 E-value=5.4 Score=40.70 Aligned_cols=185 Identities=9% Similarity=0.048 Sum_probs=92.9
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCc----eEEeccCCCCcceEEEEE-ECCE-EEEEecccCCCCCCeEEEEeC-CC
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKV----WKEIAPMNFKRCYVSTAV-HQDV-IYAMGGYNGQRRQNSVEKYNY-TE 580 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~----W~~~~~~~~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~yd~-~t 580 (824)
++.+++.|+.+ ..+..||..+.. ...... ....-.+++. -++. .++.|+.+ ..+.+||. .+
T Consensus 22 ~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~ 89 (342)
T 1yfq_A 22 SKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGS 89 (342)
T ss_dssp GGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSS
T ss_pred CCCEEEEEcCC-----CeEEEEEeCCCCccccceeeee--cCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccC
Confidence 44555666643 457788877665 322221 1122223333 3677 77777744 46899999 88
Q ss_pred CcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCC---e----EEEcCCCCCCCcceEEEEECCEEE
Q psy17309 581 NQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECN---Q----WTLIEPMRHRRSGVSCIAYHECIY 653 (824)
Q Consensus 581 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~---~----W~~~~~~p~~r~~~~~~~~~~~iy 653 (824)
.....+...+....-.+++...+.+++.|+.+ ..+..||..+. . .+.+..+.....-.+++...+. +
T Consensus 90 ~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l 163 (342)
T 1yfq_A 90 PSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-L 163 (342)
T ss_dssp SSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-E
T ss_pred CceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-E
Confidence 87655544112222223333335566666654 35777876540 0 2223333322223333444555 5
Q ss_pred EEecCCCCCccceEEEEeCCC-CC--EEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 654 VIGGFNGMSRMCNGEKYNPVT-KT--WSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~-~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
+.|+.+ ..+..||..+ .. ...... +....-.+++.. +++.+++|+.++ .+.+||.+.
T Consensus 164 ~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~dg-----~i~i~~~~~ 225 (342)
T 1yfq_A 164 IVGMNN-----SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSIDG-----RVAVEFFDD 225 (342)
T ss_dssp EEEEST-----TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETTS-----EEEEEECCT
T ss_pred EEEeCC-----CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecCC-----cEEEEEEcC
Confidence 555543 4788999877 32 222111 111112222333 567888887654 455555443
No 216
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.11 E-value=8.5 Score=39.21 Aligned_cols=238 Identities=7% Similarity=-0.081 Sum_probs=118.5
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
+.+++.+.. ...+..||+.+.+...+... ....-.+++.. ++.+|+.+..+. .....+++||+.++....
T Consensus 56 g~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~---~~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 56 GQLFLLDVF-----EGNIFKINPETKEIKRPFVS---HKANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQD 126 (333)
T ss_dssp SCEEEEETT-----TCEEEEECTTTCCEEEEEEC---SSSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEE
T ss_pred CCEEEEECC-----CCEEEEEeCCCCcEEEEeeC---CCCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEE
Confidence 445555432 24688999998887664211 12223444443 667877653221 112479999999887653
Q ss_pred e-ccCCCCcceEEEEEE-CCEEEEEeccc-CCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CC-EEEEEcccCC
Q psy17309 539 I-APMNFKRCYVSTAVH-QDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGFNG 613 (824)
Q Consensus 539 ~-~~~~~~r~~~~~~~~-~~~iyv~GG~~-~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~ 613 (824)
+ ........-..++.. ++.+|+..... .......++++|+.+.+...+..- .....+++.. ++ .||+....
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~-- 202 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETT-- 202 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGG--
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCC--
Confidence 3 322222222233332 67888864321 111235799999988776654211 1111223332 44 58876432
Q ss_pred CCcCCceEEEeCCCC--eEEEcC-----CCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCC
Q psy17309 614 HNCLNSCEVYDPECN--QWTLIE-----PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMY 684 (824)
Q Consensus 614 ~~~~~~v~~yd~~~~--~W~~~~-----~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 684 (824)
...+.+||+.++ ....+. .++.. .......+ ++.||+.... ...+.+||++...-..+. .+
T Consensus 203 ---~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~-----~~~v~~~d~~g~~~~~~~-~~ 272 (333)
T 2dg1_A 203 ---ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYG-----QGRVLVFNKRGYPIGQIL-IP 272 (333)
T ss_dssp ---GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEET-----TTEEEEECTTSCEEEEEE-CT
T ss_pred ---CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcC-----CCEEEEECCCCCEEEEEE-cC
Confidence 246888998542 232211 11111 12222333 5788887632 247889998654433332 22
Q ss_pred CCC----cceEEEEE--C-CEEEEEccCCCCceeeEEEEEECC
Q psy17309 685 NPR----SNFAIEVI--D-DMIFAIGGFNGVTTIYHVECYDEK 720 (824)
Q Consensus 685 ~~r----~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~ 720 (824)
... .....+.+ + +.||+.+..........++.+++.
T Consensus 273 ~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 273 GRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 110 01222333 3 477766543221122356677654
No 217
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.03 E-value=6.8 Score=43.93 Aligned_cols=170 Identities=11% Similarity=0.105 Sum_probs=91.0
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecc-cCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGY-NGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL- 601 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~- 601 (824)
..+..|+..+.+-...-.. ...-.+++.. +..++.|+. + ..+..||..+..... ..+.........+.+
T Consensus 427 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~l~~~~~~d-----~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s 497 (615)
T 1pgu_A 427 DDLLILQSFTGDIIKSVRL--NSPGSAVSLS-QNYVAVGLEEG-----NTIQVFKLSDLEVSF-DLKTPLRAKPSYISIS 497 (615)
T ss_dssp SEEEEEETTTCCEEEEEEC--SSCEEEEEEC-SSEEEEEETTT-----SCEEEEETTEEEEEE-ECSSCCSSCEEEEEEC
T ss_pred CceEEEeccCCceeeeccc--CCCceEEEEc-CCEEEEeecCC-----CeEEEEECCCccccc-cccCCccCceEEEEEC
Confidence 4567777655442221111 1112223333 666677764 3 468899998876543 233322333333333
Q ss_pred -CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCC-CCcceEEEEE------------CCEEEEEecCCCCCccceE
Q psy17309 602 -QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH-RRSGVSCIAY------------HECIYVIGGFNGMSRMCNG 667 (824)
Q Consensus 602 -~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~~------------~~~iyv~GG~~~~~~~~~v 667 (824)
++++++.|+.+ ..+..||..+.+-.. .+.. .......+.+ ++++++.|+.+ ..+
T Consensus 498 ~~g~~l~~~~~d-----g~i~iw~~~~~~~~~--~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-----g~i 565 (615)
T 1pgu_A 498 PSETYIAAGDVM-----GKILLYDLQSREVKT--SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-----TNI 565 (615)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTTTEEEE--CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT-----SCE
T ss_pred CCCCEEEEcCCC-----CeEEEeeCCCCccee--EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC-----CcE
Confidence 67788888765 468899988765432 2322 2222333333 67888888764 478
Q ss_pred EEEeCCCC--CEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 668 EKYNPVTK--TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 668 ~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
.+||..+. ....+..- ......-+..-+++ ++.||.++ .+.+||.++
T Consensus 566 ~iw~~~~~~~~~~~~~~h-~~~v~~l~~s~~~~-l~s~~~d~-----~v~iw~~~~ 614 (615)
T 1pgu_A 566 FIYSVKRPMKIIKALNAH-KDGVNNLLWETPST-LVSSGADA-----CIKRWNVVL 614 (615)
T ss_dssp EEEESSCTTCCEEETTSS-TTCEEEEEEEETTE-EEEEETTS-----CEEEEEEC-
T ss_pred EEEECCCCceechhhhcC-ccceEEEEEcCCCC-eEEecCCc-----eEEEEeeec
Confidence 89998875 23332211 11111122334788 88887765 466666554
No 218
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.99 E-value=2.2 Score=44.88 Aligned_cols=195 Identities=11% Similarity=-0.070 Sum_probs=94.6
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccC-CCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNG-QRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 601 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~-~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~ 601 (824)
..++.+|+.+++-..+...+. ...+....- +++.+++..... ......++.+|+.+.....+............+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 679999999987666543221 222223333 455444433221 12246899999988776665443221111111222
Q ss_pred -CCE-EEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCC------CcceEEEEECCEEEEEec----CCCCCccceEEE
Q psy17309 602 -QGK-IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR------RSGVSCIAYHECIYVIGG----FNGMSRMCNGEK 669 (824)
Q Consensus 602 -~~~-lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~------r~~~~~~~~~~~iyv~GG----~~~~~~~~~v~~ 669 (824)
+|+ |+... .........++.+|+.+++-+.+..++.. ........-+..|++... .. ......++.
T Consensus 247 pdg~~l~~~~-~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~-~~~~~~i~~ 324 (388)
T 3pe7_A 247 PDGSALVYVS-YLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYK-IENDPFLYV 324 (388)
T ss_dssp TTSSCEEEEE-EETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------------CCCCEEEE
T ss_pred CCCCEEEEEe-cCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccc-cCCCCEEEE
Confidence 555 43333 22212123499999999887666544320 011111122233333210 00 012357999
Q ss_pred EeCCCCCEEECCCCCCC----------CcceEEEEECC-EEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 670 YNPVTKTWSQVPDMYNP----------RSNFAIEVIDD-MIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 670 yd~~~~~W~~~~~~p~~----------r~~~~~~~~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
+|+.+.+-+.+...+.+ .....+..-++ .|++....++ ...++.+|.....|
T Consensus 325 ~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g---~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 325 FNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHG---KPALYLATLPESVW 387 (388)
T ss_dssp EETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS---SCEEEEEECCGGGG
T ss_pred EeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCC---ceeEEEEECChhcc
Confidence 99998877666432220 11111222355 4555543332 23689999887766
No 219
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.97 E-value=2.8 Score=44.06 Aligned_cols=200 Identities=10% Similarity=-0.075 Sum_probs=103.7
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEE--E
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT--L 601 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~--~ 601 (824)
..++.+|+.+++-..+...+..........-+++..+++..+ ..++.+|+.+.+-..+...+.......... -
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 134 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-----RNLMRVDLATLEENVVYQVPAEWVGYGTWVANS 134 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECCTTEEEEEEEEECT
T ss_pred ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeeeechhhcccccceeECC
Confidence 469999999988877765443222112223355444444321 478999999987666655554433222222 2
Q ss_pred CCEEEEEcccC-----------------CCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecCCC-CC
Q psy17309 602 QGKIYITGGFN-----------------GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNG-MS 662 (824)
Q Consensus 602 ~~~lyv~GG~~-----------------~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-~~ 662 (824)
+++.++.--.. .......++.+|+.+++-+.+..-+. ...+....- +++.+++..... ..
T Consensus 135 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~ 213 (388)
T 3pe7_A 135 DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDL 213 (388)
T ss_dssp TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTT
T ss_pred CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCC
Confidence 44433311000 01123678999999887665542221 222223333 455444433221 12
Q ss_pred ccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCE-EEEEccCCCCceeeEEEEEECCCCcEEeccCCC
Q psy17309 663 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN 731 (824)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 731 (824)
....++.+|+.+.....+........ .....+ +++ |+.+...++ .....++++|+++.+-+.+..++
T Consensus 214 ~~~~l~~~d~~~~~~~~l~~~~~~~~-~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 214 VDARMWLINEDGTNMRKVKTHAEGES-CTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp SSCSEEEEETTSCCCEESCCCCTTEE-EEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCEEEEEEEC
T ss_pred CcceEEEEeCCCCceEEeeeCCCCcc-cccceECCCCCEEEEEecCCC-CCcceEEEEecCCCceEEEEcCC
Confidence 24589999998877666654321111 111223 555 544432222 12235999999998876664443
No 220
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.95 E-value=1.7 Score=44.40 Aligned_cols=140 Identities=11% Similarity=0.012 Sum_probs=72.8
Q ss_pred ceEEEEECCCCceEEeccCCCCc-ceEEEEE-ECC-EEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCc----ccCce
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKR-CYVSTAV-HQD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNV----ERSDA 596 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r-~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~----~r~~~ 596 (824)
..+..+|+.+.+-...-..+... .-..++. -++ .+|+.++. ...+.++|+.+.+-...-+.+. .....
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 57899999887654332232210 1122333 244 67777652 2579999998876543212211 00122
Q ss_pred EEEEE-CC-EEEEEcccC---CCC---cCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecCCCCCccce
Q psy17309 597 SATTL-QG-KIYITGGFN---GHN---CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCN 666 (824)
Q Consensus 597 ~~~~~-~~-~lyv~GG~~---~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~ 666 (824)
.++.. ++ .+|+..... ... ....+.+||+.+.+....-+.+. ....++.. +++ ||+.+ ..
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~--------~~ 155 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR--QITMLAWARDGSKLYGLG--------RD 155 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS--SCCCEEECTTSSCEEEES--------SS
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC--CcceeEECCCCCEEEEeC--------Ce
Confidence 33333 44 677764210 011 23679999998876543322221 11222322 444 66662 46
Q ss_pred EEEEeCCCCCEE
Q psy17309 667 GEKYNPVTKTWS 678 (824)
Q Consensus 667 v~~yd~~~~~W~ 678 (824)
+.++|+.+.+-.
T Consensus 156 i~~~d~~~~~~~ 167 (337)
T 1pby_B 156 LHVMDPEAGTLV 167 (337)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCcEe
Confidence 889999877643
No 221
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.84 E-value=4.1 Score=47.07 Aligned_cols=214 Identities=8% Similarity=-0.005 Sum_probs=110.2
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCC---C-cceEEEEE--ECCEEEEEecccCCCCCCeEEEEeCCCC
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF---K-RCYVSTAV--HQDVIYAMGGYNGQRRQNSVEKYNYTEN 581 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~---~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 581 (824)
++.+|.+--. +......+|+.+.....|+.+...+. . ........ -+|+..+++...+......++++|..++
T Consensus 79 G~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg 157 (695)
T 2bkl_A 79 NGRFFYVRTH-KDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG 157 (695)
T ss_dssp TTEEEEEEEC-TTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC
T ss_pred CCEEEEEEEc-CCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC
Confidence 4455544322 22234667888887888887754332 1 11122222 2677666654433333468999999998
Q ss_pred cEEeecCCCcccCceEEEEECCEEEEEcccCCC--------CcCCceEEEeCCCCeE--EEcCCCCCCCcceEEEEE--C
Q psy17309 582 QWSLIAPMNVERSDASATTLQGKIYITGGFNGH--------NCLNSCEVYDPECNQW--TLIEPMRHRRSGVSCIAY--H 649 (824)
Q Consensus 582 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~--------~~~~~v~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~ 649 (824)
+......++.......+..-+|+.++++..+.. .....++.++..+..- ..+...+........+.. +
T Consensus 158 ~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpD 237 (695)
T 2bkl_A 158 EWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRD 237 (695)
T ss_dssp CBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTT
T ss_pred CCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCC
Confidence 764111222222122222236666666655432 2345688999887652 233222222112222222 5
Q ss_pred CEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCc---EEe
Q psy17309 650 ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE---WYE 726 (824)
Q Consensus 650 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~---W~~ 726 (824)
|+..+++..... ....++.+|..+..|+.+..-... ....+..++.+|+....+. ....++.+|+++.. |+.
T Consensus 238 G~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 238 GKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGA--KYEVHAWKDRFYVLTDEGA--PRQRVFEVDPAKPARASWKE 312 (695)
T ss_dssp SCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSC--CEEEEEETTEEEEEECTTC--TTCEEEEEBTTBCSGGGCEE
T ss_pred CCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCc--eEEEEecCCcEEEEECCCC--CCCEEEEEeCCCCCccCCeE
Confidence 554444443221 245788888777788777532221 1222335666666543321 23478899987754 877
Q ss_pred c
Q psy17309 727 A 727 (824)
Q Consensus 727 ~ 727 (824)
+
T Consensus 313 l 313 (695)
T 2bkl_A 313 I 313 (695)
T ss_dssp E
T ss_pred E
Confidence 6
No 222
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=92.82 E-value=5.6 Score=37.48 Aligned_cols=143 Identities=11% Similarity=0.096 Sum_probs=83.3
Q ss_pred EEEEECCEEEEEeecCCCcccceEEEEECCCC--ceEE--e----ccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeE
Q psy17309 503 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK--VWKE--I----APMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSV 573 (824)
Q Consensus 503 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~--~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 573 (824)
+++..++.+|+|=| +.+|+++.... .... + +.+|.. ..++... .++++|+|-| +..
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-IDAa~~~~~~~~~yfFkG-------~~y 75 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LDSVFEEPLSKKLFFFSG-------RQV 75 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CSEEEECTTTCCEEEEET-------TEE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-ccEEEEECCCCeEEEEeC-------CEE
Confidence 45557899999987 67888887652 2221 1 233432 2222211 2689999988 678
Q ss_pred EEEeCCCCcE-EeecC--CCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEE-----c----CCCCCC
Q psy17309 574 EKYNYTENQW-SLIAP--MNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----I----EPMRHR 639 (824)
Q Consensus 574 ~~yd~~t~~W-~~~~~--~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p~~ 639 (824)
|+|+..+..- +.+.. +|......-+|.. ++++|+|-| +..++||..+++=.. + +.+|
T Consensus 76 w~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp-- 146 (195)
T 1itv_A 76 WVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVP-- 146 (195)
T ss_dssp EEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSC--
T ss_pred EEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCC--
Confidence 8888543111 11111 2322122333333 689999977 467899987754211 1 1222
Q ss_pred CcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC
Q psy17309 640 RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 640 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 676 (824)
..-.++...++.+|.+-| +..++||..+..
T Consensus 147 ~~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 147 LDTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp SSCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred CCCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 223345556899999988 578889887654
No 223
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.80 E-value=2.1 Score=45.44 Aligned_cols=144 Identities=10% Similarity=0.149 Sum_probs=77.4
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccC-ceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEE
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERS-DASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 632 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 632 (824)
++..++.|+.+ ..+.+||..+.+-... +..... -.+++.. ++..++.|+.+ ..+..||..+.+...
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEE
Confidence 67777777754 4688899887754322 111111 1222222 55666677655 468889998876543
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEEC-CCC----CCCCcceEEEEE--CCEEEEEc
Q psy17309 633 IEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDM----YNPRSNFAIEVI--DDMIFAIG 703 (824)
Q Consensus 633 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~----p~~r~~~~~~~~--~~~i~v~G 703 (824)
.-.... ...+++.. ++++++.|+.+ ..+..||..+..-... ... .........+.+ +++.++.|
T Consensus 202 ~~~~~~--~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 202 TLSIED--GVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp EEECSS--CEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEcCC--CcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 322111 11222222 67788888764 4578899877653321 110 111111222333 67788888
Q ss_pred cCCCCceeeEEEEEECCCC
Q psy17309 704 GFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 704 G~~~~~~~~~v~~yd~~~~ 722 (824)
+.++ .+.+||..+.
T Consensus 275 s~d~-----~v~~wd~~~~ 288 (393)
T 1erj_A 275 SLDR-----SVKLWNLQNA 288 (393)
T ss_dssp ETTS-----EEEEEEC---
T ss_pred eCCC-----EEEEEECCCC
Confidence 8765 5778887653
No 224
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=92.76 E-value=4.5 Score=40.62 Aligned_cols=191 Identities=10% Similarity=-0.034 Sum_probs=101.4
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++.+|+++.. ...+++||+.++ ...+... . ..-.+++. -++.+|+.... ...+.+||+.+.+.+.+
T Consensus 39 g~~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~-~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 39 RSAVIFSDVR-----QNRTWAWSDDGQ-LSPEMHP-S-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESI 105 (296)
T ss_dssp GTEEEEEEGG-----GTEEEEEETTSC-EEEEESS-C-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEE
T ss_pred CCEEEEEeCC-----CCEEEEEECCCC-eEEEECC-C-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEE
Confidence 3457777743 256899999988 6554432 1 12233443 26788876531 25799999988888765
Q ss_pred cCCCc----ccCceEEEEECCEEEEE----cccCC--------CCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-C
Q psy17309 587 APMNV----ERSDASATTLQGKIYIT----GGFNG--------HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-H 649 (824)
Q Consensus 587 ~~~p~----~r~~~~~~~~~~~lyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~ 649 (824)
..... .+....+..-+|++|+. |.... ......+++||+. ++...+..- .....+.+.. +
T Consensus 106 ~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~gi~~s~d 182 (296)
T 3e5z_A 106 ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--RVKPNGLAFLPS 182 (296)
T ss_dssp ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--CSSEEEEEECTT
T ss_pred eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--CCCCccEEECCC
Confidence 33211 11122222237889987 43210 0113478999987 555444221 1111223322 5
Q ss_pred CEEEEEecCCCCCccceEEEEeCC-CCCE-E--ECCCCCCCCcceEEEE-ECCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 650 ECIYVIGGFNGMSRMCNGEKYNPV-TKTW-S--QVPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 650 ~~iyv~GG~~~~~~~~~v~~yd~~-~~~W-~--~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
+++++.+.. ...+++||+. +.+. . .+-..... .-.+++. -+|+||+.. + ..+.+||++....
T Consensus 183 g~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~-~p~~i~~d~~G~l~v~~--~-----~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 183 GNLLVSDTG-----DNATHRYCLNARGETEYQGVHFTVEPG-KTDGLRVDAGGLIWASA--G-----DGVHVLTPDGDEL 249 (296)
T ss_dssp SCEEEEETT-----TTEEEEEEECSSSCEEEEEEEECCSSS-CCCSEEEBTTSCEEEEE--T-----TEEEEECTTSCEE
T ss_pred CCEEEEeCC-----CCeEEEEEECCCCcCcCCCeEeeCCCC-CCCeEEECCCCCEEEEc--C-----CeEEEECCCCCEE
Confidence 666654432 2578889886 4444 1 11111111 1112322 378888876 1 2689999986554
Q ss_pred Eec
Q psy17309 725 YEA 727 (824)
Q Consensus 725 ~~~ 727 (824)
..+
T Consensus 250 ~~~ 252 (296)
T 3e5z_A 250 GRV 252 (296)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 225
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.69 E-value=7 Score=39.57 Aligned_cols=189 Identities=12% Similarity=0.146 Sum_probs=94.9
Q ss_pred CCEEEEEeecCCCcccceEEEEECCC--CceEEeccCCCCcce-EEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCC
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVT--KVWKEIAPMNFKRCY-VSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTEN 581 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~ 581 (824)
++.+++.|+.+ ..+..||..+ ..+.....+...... .+++.. ++.+++.|+.+ ..+.+||..+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-----KTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEECTT
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-----CeEEEEecCCC
Confidence 45566666644 3577777664 345544433222222 233333 36778888754 35777777653
Q ss_pred -------cEEeecCCCcccCceEEEEE--C--CEEEEEcccCCCCcCCceEEEeCCCCe----EEEc---C--CC-CC-C
Q psy17309 582 -------QWSLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQ----WTLI---E--PM-RH-R 639 (824)
Q Consensus 582 -------~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~v~~yd~~~~~----W~~~---~--~~-p~-~ 639 (824)
.|+.+..+.........+.. + +.+++.|+.+ ..+..||..+.+ |... . .. +. .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCChHHhccccccccccccccccCCc
Confidence 34444333322222233333 3 6677777754 367888876543 2211 0 11 11 1
Q ss_pred CcceEEEEE-----CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CC----EEEEEccCCCC
Q psy17309 640 RSGVSCIAY-----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DD----MIFAIGGFNGV 708 (824)
Q Consensus 640 r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~----~i~v~GG~~~~ 708 (824)
.....++.. ++.+++.|+.+ ..+..++........+..+.........+.+ ++ ++++.|+.++
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg- 240 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALE-----QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG- 240 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETT-----EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS-
T ss_pred ccceeEEEeccCCCCCcEEEEecCC-----CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC-
Confidence 111222222 26677777753 3445556566665444433332222223333 44 7888888765
Q ss_pred ceeeEEEEEECCC
Q psy17309 709 TTIYHVECYDEKT 721 (824)
Q Consensus 709 ~~~~~v~~yd~~~ 721 (824)
.+.+||..+
T Consensus 241 ----~i~iwd~~~ 249 (351)
T 3f3f_A 241 ----RIRIFKITE 249 (351)
T ss_dssp ----CEEEEEEEE
T ss_pred ----eEEEEeCCC
Confidence 466676654
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=92.57 E-value=8.7 Score=37.88 Aligned_cols=195 Identities=12% Similarity=0.004 Sum_probs=109.8
Q ss_pred eEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEe
Q psy17309 502 HGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYN 577 (824)
Q Consensus 502 ~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd 577 (824)
+++++. ++.||+.-.. ...++++|+.+..-..+..... ..-+++++. ++.||+.-.. .+.+.++|
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~ 107 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAK 107 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECC-----CCEEEEEE
Confidence 455554 5789987642 3579999998765433322111 122445554 5799998542 36789999
Q ss_pred CCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEE
Q psy17309 578 YTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIY 653 (824)
Q Consensus 578 ~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 653 (824)
+....-+.+.+... .....+++- +++||+..... ....+++++++...-+.+..... ..-.+.+.- ++.||
T Consensus 108 ~~g~~~~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~ly 182 (267)
T 1npe_A 108 MDGTQRRVLFDTGL-VNPRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLC 182 (267)
T ss_dssp TTSCSCEEEECSSC-SSEEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEE
T ss_pred cCCCCEEEEEECCC-CCccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEE
Confidence 87654333322111 111233443 68999975321 13578888886544333322111 122233333 57899
Q ss_pred EEecCCCCCccceEEEEeCCCCCEEEC-CCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEE
Q psy17309 654 VIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 725 (824)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (824)
+.-.. .+.|.++|+....-..+ ..+..| .+++.-++.||+....+ +.+.++|+++.+-.
T Consensus 183 v~d~~-----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~~~-----~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 183 WVDAG-----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDWKT-----NSVIAMDLAISKEM 242 (267)
T ss_dssp EEETT-----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEETTT-----TEEEEEETTTTEEE
T ss_pred EEECC-----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEECCC-----CeEEEEeCCCCCce
Confidence 98653 36899999875432222 222222 35556689999975332 36899999886544
No 227
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.44 E-value=2.1 Score=49.94 Aligned_cols=205 Identities=5% Similarity=-0.167 Sum_probs=104.4
Q ss_pred CCEEEEEeec-CCCcccceEEEEECCCCceEEeccCCCCc----------------------c-eEEE-EEECCEEEEEe
Q psy17309 508 GYNIYVIGGF-DGNEYYNSCRCFNAVTKVWKEIAPMNFKR----------------------C-YVST-AVHQDVIYAMG 562 (824)
Q Consensus 508 ~~~lyv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~~~~r----------------------~-~~~~-~~~~~~iyv~G 562 (824)
+++.+++++. ++......++.+|..+++...+....... . -..+ ..-+++..+++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 5555555554 44334458999999998877655332110 0 0112 22256655555
Q ss_pred cccCCCCCCeEEEEeCCCC---cEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCC
Q psy17309 563 GYNGQRRQNSVEKYNYTEN---QWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH 638 (824)
Q Consensus 563 G~~~~~~~~~~~~yd~~t~---~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 638 (824)
+. ..++++|..+. .-..+..... .....+.. +|+..+++.. ..++.+|..+++...+.....
T Consensus 127 ~~------~~i~~~d~~~~~~~~~~~l~~~~~--~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 127 LG------GELYLYDLKQEGKAAVRQLTHGEG--FATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp ET------TEEEEEESSSCSTTSCCBCCCSSS--CEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCCCCC
T ss_pred eC------CcEEEEECCCCCcceEEEcccCCc--ccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEeccCCc
Confidence 42 68999999887 4433332211 11122222 5655555431 379999999888776643222
Q ss_pred CC----------------cceEEEEECCEEEEEecCCCC----------------------------CccceEEEEeCCC
Q psy17309 639 RR----------------SGVSCIAYHECIYVIGGFNGM----------------------------SRMCNGEKYNPVT 674 (824)
Q Consensus 639 ~r----------------~~~~~~~~~~~iyv~GG~~~~----------------------------~~~~~v~~yd~~~ 674 (824)
.. ....+..-+|+.++++..++. .....++.+|+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 10 011111225554444432211 0123788889887
Q ss_pred -CCEEECCCCC-CCCc-ceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 675 -KTWSQVPDMY-NPRS-NFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 675 -~~W~~~~~~p-~~r~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
.+-..+...+ .... ...+. -+++.++++..+.......++++|+.+.+...+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEE
Confidence 6654443221 1111 11122 455544444332223345799999988876554
No 228
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=92.37 E-value=7.4 Score=39.92 Aligned_cols=216 Identities=8% Similarity=-0.063 Sum_probs=108.6
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEE
Q psy17309 474 TDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 552 (824)
Q Consensus 474 ~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 552 (824)
...++.+|..+.+-..+ ......... +++.+++....+......++.+|..+++...+...+. ....+
T Consensus 42 ~~~l~~~d~~~~~~~~l--------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~ 110 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI--------ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN---IRSLE 110 (347)
T ss_dssp EEEEEEEETTTCCEEEE--------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE---EEEEE
T ss_pred cceEEEEeCCCCceEEc--------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC---cccee
Confidence 45678888887765553 111222222 4433333332221224569999999888776655432 22222
Q ss_pred EE-CCEEEEEeccc------------------CC----CCCCeEEEEeCCCCcE-EeecCCCcccCceEEEEE-CCEEEE
Q psy17309 553 VH-QDVIYAMGGYN------------------GQ----RRQNSVEKYNYTENQW-SLIAPMNVERSDASATTL-QGKIYI 607 (824)
Q Consensus 553 ~~-~~~iyv~GG~~------------------~~----~~~~~~~~yd~~t~~W-~~~~~~p~~r~~~~~~~~-~~~lyv 607 (824)
.. +++.++++... +. .....++++|+.+++. ..+.. + .....+.. ++ +++
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVV 185 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEE
Confidence 22 55444443321 00 0125689999998887 66654 3 22333333 45 555
Q ss_pred EcccCCCC---c-CCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCC---CCccceEEEEeCCCCCEEEC
Q psy17309 608 TGGFNGHN---C-LNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNG---MSRMCNGEKYNPVTKTWSQV 680 (824)
Q Consensus 608 ~GG~~~~~---~-~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~v~~yd~~~~~W~~~ 680 (824)
.+..+... . ...++.+| +++++.+..- .......-+|+.+++++... ......++.+| +.++..+
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred EEecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 55433211 2 45788888 6777666432 12222244665444444222 11245789999 6677766
Q ss_pred CCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEE
Q psy17309 681 PDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYD 718 (824)
Q Consensus 681 ~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd 718 (824)
..-.. ........+.+.+|+.+..++ ...++ ++
T Consensus 258 ~~~~~-~~~~~~~~~sdg~~~~~~~~~---~~~l~-~~ 290 (347)
T 2gop_A 258 LDEVD-RGVGQAKIKDGKVYFTLFEEG---SVNLY-IW 290 (347)
T ss_dssp STTCC-SEEEEEEEETTEEEEEEEETT---EEEEE-EE
T ss_pred cccCC-cccCCccEEcCcEEEEEecCC---cEEEE-Ec
Confidence 43211 111211222234777766544 23567 77
No 229
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.35 E-value=2.2 Score=47.83 Aligned_cols=189 Identities=10% Similarity=-0.039 Sum_probs=94.4
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CC-EEEEEecccCCCCCCeEEEEeC--CCCcE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QD-VIYAMGGYNGQRRQNSVEKYNY--TENQW 583 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~--~t~~W 583 (824)
++.+|+.+.. ...+..+|..+++-... ++....-|.++.. ++ .+|+.+. + +.+.+||+ .+.+-
T Consensus 148 ~~~~~vs~~~-----d~~V~v~D~~t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 148 PNLFSVTLRD-----AGQIALVDGDSKKIVKV--IDTGYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEPTK 214 (543)
T ss_dssp GGEEEEEEGG-----GTEEEEEETTTCCEEEE--EECSTTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCEE
T ss_pred CCEEEEEEcC-----CCeEEEEECCCceEEEE--EecCcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCCcE
Confidence 5677877653 25688899988765322 1212224544443 44 5666543 2 67999999 66543
Q ss_pred EeecCCCcccCceEEEEE-----CC-EEEEEcccCCCCcCCceEEEeCCCCeEEEcCCC-----------CCCCcceEEE
Q psy17309 584 SLIAPMNVERSDASATTL-----QG-KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-----------RHRRSGVSCI 646 (824)
Q Consensus 584 ~~~~~~p~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-----------p~~r~~~~~~ 646 (824)
+..++....-..++.. +| .+|+ +.+. .+.+.++|..+.+-...-+. |.+|....+.
T Consensus 215 --~~~i~~g~~p~~va~sp~~~~dg~~l~v-~~~~----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~ 287 (543)
T 1nir_A 215 --VAEIKIGIEARSVESSKFKGYEDRYTIA-GAYW----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA 287 (543)
T ss_dssp --EEEEECCSEEEEEEECCSTTCTTTEEEE-EEEE----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred --EEEEecCCCcceEEeCCCcCCCCCEEEE-EEcc----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEE
Confidence 3333333333334433 45 4555 4332 25678889887653322111 1223222222
Q ss_pred EE-CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE-CCE-EEEEccCCCCceeeEEEEEECCCCc
Q psy17309 647 AY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 647 ~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
.. ++.+|+.... ...+..+|..+.+-..+..++..+.-+.++.- +++ +|+.+.. .+.+.++|..+++
T Consensus 288 s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg~ 357 (543)
T 1nir_A 288 SHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDRR 357 (543)
T ss_dssp CSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTTE
T ss_pred CCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCCe
Confidence 22 3455554432 36788898876431111111222222333322 555 4444322 2367889998876
Q ss_pred EEe
Q psy17309 724 WYE 726 (824)
Q Consensus 724 W~~ 726 (824)
-..
T Consensus 358 l~~ 360 (543)
T 1nir_A 358 LSA 360 (543)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 230
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.20 E-value=4.7 Score=42.39 Aligned_cols=184 Identities=11% Similarity=0.135 Sum_probs=94.6
Q ss_pred EEEEeecCCCcccceEEEEECCCCceEEec--cCCCCcc--eEEEEE--ECCEEEEEecccCCCCCCeEEEEeCCCCc--
Q psy17309 511 IYVIGGFDGNEYYNSCRCFNAVTKVWKEIA--PMNFKRC--YVSTAV--HQDVIYAMGGYNGQRRQNSVEKYNYTENQ-- 582 (824)
Q Consensus 511 lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~--~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-- 582 (824)
.++.|+.+ ..+..||..+++-...- ..+.... -.+++. .++.+++.|+.+ ..+..||+....
T Consensus 172 ~l~s~s~D-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~~~ 241 (380)
T 3iz6_a 172 RLITGSGD-----QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITSRA 241 (380)
T ss_dssp CEEEECTT-----SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTCCC
T ss_pred EEEEECCC-----CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCCcc
Confidence 44555533 45888998887644322 1111111 112222 256788888865 457888876321
Q ss_pred EEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCC-CC----CCc-ceEEE-EECCEEEE
Q psy17309 583 WSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RH----RRS-GVSCI-AYHECIYV 654 (824)
Q Consensus 583 W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~----~r~-~~~~~-~~~~~iyv 654 (824)
-..+..-.. .-.+++.. ++..++.|+.+ ..+..||..++.-...-.. +. ... -.+++ .-++++++
T Consensus 242 ~~~~~~h~~--~v~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 314 (380)
T 3iz6_a 242 VRTYHGHEG--DINSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF 314 (380)
T ss_dssp CEEECCCSS--CCCEEEECTTSSEEEEECSS-----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE
T ss_pred eEEECCcCC--CeEEEEEecCCCeEEEEcCC-----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEE
Confidence 111111111 11122222 66777888765 4688899888754332111 11 011 11222 23678777
Q ss_pred EecCCCCCccceEEEEeCCCCCEEE-CCCCCCCCc-ceEEEE--ECCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 655 IGGFNGMSRMCNGEKYNPVTKTWSQ-VPDMYNPRS-NFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 655 ~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~-~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
.|+.+ ..+.+||..+.+-.. +..+..... ...++. -+++.++.||.++ .+.+||...
T Consensus 315 ~g~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-----~i~iW~~~~ 375 (380)
T 3iz6_a 315 AGYSN-----GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-----NLKIWAFSG 375 (380)
T ss_dssp EECTT-----SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-----CEEEEECCS
T ss_pred EEECC-----CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-----CEEEEecCC
Confidence 77754 468899987665432 222221111 112222 3788889998876 466777654
No 231
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.01 E-value=4.6 Score=41.20 Aligned_cols=142 Identities=11% Similarity=0.132 Sum_probs=75.3
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEE
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 632 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 632 (824)
++..++.|+.+ ..+.+||..+.+-.. .+.........+.+ ++.+++.|+.+ ..+..||.....-..
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRD-----KTIKVWTIKGQCLAT 143 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETT-----SCEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEE
Confidence 56777777754 568889998875321 11111111222222 56777777765 357788876554333
Q ss_pred cCCCCCCCcceEEEEE--------CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEE
Q psy17309 633 IEPMRHRRSGVSCIAY--------HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAI 702 (824)
Q Consensus 633 ~~~~p~~r~~~~~~~~--------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 702 (824)
+..- ......+.+ ++..++.||.+ ..+..||+.+.+-... +.........+.+ ++++++.
T Consensus 144 ~~~h---~~~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 144 LLGH---NDWVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIAS 213 (319)
T ss_dssp ECCC---SSCEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEE
T ss_pred Eecc---CCcEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEE
Confidence 3211 111111211 23356666654 4678888876543221 1111111222223 6788888
Q ss_pred ccCCCCceeeEEEEEECCCCc
Q psy17309 703 GGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~ 723 (824)
||.++ .+.+||..+.+
T Consensus 214 ~~~dg-----~i~iwd~~~~~ 229 (319)
T 3frx_A 214 AGKDG-----EIMLWNLAAKK 229 (319)
T ss_dssp EETTC-----EEEEEETTTTE
T ss_pred EeCCC-----eEEEEECCCCc
Confidence 88765 68888887754
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=91.95 E-value=4.5 Score=46.63 Aligned_cols=118 Identities=11% Similarity=0.170 Sum_probs=73.1
Q ss_pred EEEECCEEEEEecccCCCCCCeEEEEeCCCCc--EEeecCCCcc--------cCceEEEEECCEEEEEcccCCCCcCCce
Q psy17309 551 TAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVE--------RSDASATTLQGKIYITGGFNGHNCLNSC 620 (824)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~v 620 (824)
-++.++.||+.... ..++.+|..|.+ |+.-...+.. ....+.++.+++||+... ...+
T Consensus 73 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSASW------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECCC------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 35679999998652 468999988765 8765433211 122345567899988632 2468
Q ss_pred EEEeCCCCe--EEEcCC-CCC--CCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC--EEEC
Q psy17309 621 EVYDPECNQ--WTLIEP-MRH--RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 680 (824)
Q Consensus 621 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 680 (824)
..+|.++++ |+.-.. -+. .....+.++.++.+|+..+.........+..||..+.+ |+.-
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 999998775 876532 111 11122334568888876543222234679999998765 8764
No 233
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.92 E-value=6.3 Score=40.62 Aligned_cols=186 Identities=8% Similarity=-0.012 Sum_probs=93.3
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceE-Eec--c---CCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCC
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK-EIA--P---MNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTEN 581 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~--~---~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 581 (824)
++.+++.||.+ ..+..||..+++-. .+. . +..... ...+..++.|.+.-. ...+..||..+.
T Consensus 47 d~~~l~sg~~D-----g~v~iwd~~~~~~~~~~~~~~v~~~~~~~~-~~s~s~D~~i~~w~~------~~~~~~~~~~~~ 114 (343)
T 3lrv_A 47 DKWVCMCRCED-----GALHFTQLKDSKTITTITTPNPRTGGEHPA-IISRGPCNRLLLLYP------GNQITILDSKTN 114 (343)
T ss_dssp EEEEEEEEEET-----TEEEEEEESSSSCEEEEEEECCCTTCCCCS-EEEECSTTEEEEEET------TTEEEEEETTTC
T ss_pred CCCEEEEECCC-----CcEEEEECCCCcEEEEEecCCceeeeeCCc-eEEecCCCeEEEEEc------cCceEEeecCCc
Confidence 45677788765 35778887766532 111 1 100001 222223445544432 235666777666
Q ss_pred cEEeecCCCcccCceEEEEE---CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEec
Q psy17309 582 QWSLIAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGG 657 (824)
Q Consensus 582 ~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 657 (824)
+-...-..+....-.+++.. ++.+++.|+.+ ..+..||..+.+-.............+++.. ++.+++.|+
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc
Confidence 52211111111111112211 46677777765 4688999988775443322222122223333 678888887
Q ss_pred CCCCCccceEEEEeCCCCCEE--ECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 658 FNGMSRMCNGEKYNPVTKTWS--QVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 658 ~~~~~~~~~v~~yd~~~~~W~--~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
.+ ..+.+||..+.+-. .+.. . .......+.+ +++.++.|+ ++ .+.+||..+..
T Consensus 190 ~d-----g~i~iwd~~~~~~~~~~~~~-~-h~~~v~~l~fs~~g~~l~s~~-~~-----~v~iwd~~~~~ 246 (343)
T 3lrv_A 190 PD-----GILDVYNLSSPDQASSRFPV-D-EEAKIKEVKFADNGYWMVVEC-DQ-----TVVCFDLRKDV 246 (343)
T ss_dssp TT-----SCEEEEESSCTTSCCEECCC-C-TTSCEEEEEECTTSSEEEEEE-SS-----BEEEEETTSST
T ss_pred CC-----CEEEEEECCCCCCCccEEec-c-CCCCEEEEEEeCCCCEEEEEe-CC-----eEEEEEcCCCC
Confidence 54 46889999876532 2211 0 1112222333 677777776 22 58889987753
No 234
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.91 E-value=10 Score=38.99 Aligned_cols=152 Identities=8% Similarity=0.076 Sum_probs=79.5
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEc
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI 633 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 633 (824)
++..++.|+.+ ..+..||..+.+-...........-.+++.. ++.+++.|+.+ ..+..||..+.+-..
T Consensus 138 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~~~~- 206 (343)
T 3lrv_A 138 NTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-----GILDVYNLSSPDQAS- 206 (343)
T ss_dssp -CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-----SCEEEEESSCTTSCC-
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCCCCc-
Confidence 56677777754 4588899988776443322222222233333 67888888765 468899988765320
Q ss_pred CCCCC-CCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCE-EECCCCCCCCcce--EEEEE--CCEEEEEccC
Q psy17309 634 EPMRH-RRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTW-SQVPDMYNPRSNF--AIEVI--DDMIFAIGGF 705 (824)
Q Consensus 634 ~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~--~~~~~--~~~i~v~GG~ 705 (824)
..+.. .......+.+ ++..++.|+ + +.+.+||+.+.+- ..+.......... .++.+ +++.++.|+.
T Consensus 207 ~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 207 SRFPVDEEAKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp EECCCCTTSCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred cEEeccCCCCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 11121 1122233333 566777776 2 2688999876531 1111110000111 12333 5677777544
Q ss_pred -CCCceeeEEEEEECCCCcEEe
Q psy17309 706 -NGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 706 -~~~~~~~~v~~yd~~~~~W~~ 726 (824)
++ .-.+|.|+.....|..
T Consensus 281 ~d~---~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 281 ESN---SLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTT---EEEEEEECTTTCSEEE
T ss_pred CCC---cEEEEEEcccccceEe
Confidence 32 1245555557778987
No 235
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=91.91 E-value=11 Score=39.35 Aligned_cols=177 Identities=7% Similarity=-0.075 Sum_probs=93.8
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEE--E
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASAT--T 600 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~--~ 600 (824)
..+..+|+.+.+-........ .-.+++.. ++++++.|+. +.+.+++..+..................+ .
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~--~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs 228 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRG--EVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIARKTDFDKNWSLSKINFI 228 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSS--CCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEE
T ss_pred CEEEEeECCCCcEEEEeCCCC--ceEEEEEccCCceEEeccc------eeEEEEEeccCcceeeeecCCCCCCEEEEEEc
Confidence 468889998876543222111 11223332 5676666652 34677777776643322222111112222 3
Q ss_pred ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC--CCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCC
Q psy17309 601 LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 601 ~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 676 (824)
-+++.++.++.++.. ...+..+|.......... .+........++.+ ++++++.|+.+ ..|.+||..+.+
T Consensus 229 pdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D-----~~V~iwd~~~~~ 302 (365)
T 4h5i_A 229 ADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND-----NSIALVKLKDLS 302 (365)
T ss_dssp ETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTE
T ss_pred CCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-----CEEEEEECCCCc
Confidence 378888888765421 224566776666554332 22222222233333 78888888864 468899987754
Q ss_pred EEECCCCCCCC-cceEEEEE--CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 677 WSQVPDMYNPR-SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 677 W~~~~~~p~~r-~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
- +..+.... .....+.+ ++++++.|+.++ .|-+||+..
T Consensus 303 ~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~-----tvrvw~ip~ 343 (365)
T 4h5i_A 303 M--SKIFKQAHSFAITEVTISPDSTYVASVSAAN-----TIHIIKLPL 343 (365)
T ss_dssp E--EEEETTSSSSCEEEEEECTTSCEEEEEETTS-----EEEEEECCT
T ss_pred E--EEEecCcccCCEEEEEECCCCCEEEEEeCCC-----eEEEEEcCC
Confidence 2 21111111 11223333 788999988776 677787643
No 236
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=91.90 E-value=22 Score=41.14 Aligned_cols=246 Identities=7% Similarity=-0.029 Sum_probs=122.8
Q ss_pred CCceEEEEECC---CCcEEEcccC-CCCCCC-ceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCC
Q psy17309 473 PTDFVETYDTR---ADRWVKIDQV-DPMGPR-AYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK 545 (824)
Q Consensus 473 ~~~~~~~yd~~---~~~W~~~~~~-~~~~~r-~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 545 (824)
....++..+.. ...|..+-.. .+.... ........ +++.++++...++.....++.+|..+++...... +..
T Consensus 131 ~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~ 209 (741)
T 1yr2_A 131 NQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWV 209 (741)
T ss_dssp SSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEE
T ss_pred eEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCc
Confidence 34566777765 5566653111 111111 11122222 5665556544333333579999999998754311 111
Q ss_pred cceEEEEEECCEEEEEecccCC---------CCCCeEEEEeCCCCcE--EeecCCCc-ccCceEEEEE-CCEEEEEcccC
Q psy17309 546 RCYVSTAVHQDVIYAMGGYNGQ---------RRQNSVEKYNYTENQW--SLIAPMNV-ERSDASATTL-QGKIYITGGFN 612 (824)
Q Consensus 546 r~~~~~~~~~~~iyv~GG~~~~---------~~~~~~~~yd~~t~~W--~~~~~~p~-~r~~~~~~~~-~~~lyv~GG~~ 612 (824)
.. ...+...++-++++..+.. .....+++++..+..- ..+-..+. +......... +|+..++...+
T Consensus 210 ~~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 288 (741)
T 1yr2_A 210 KF-SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSE 288 (741)
T ss_dssp ES-CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ee-ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEc
Confidence 10 1122222233333333221 1245688888876542 12222221 2222222222 56544444433
Q ss_pred CCCcCCceEEEeCCCC--e-EEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCC--CCEEECCCCCCCC
Q psy17309 613 GHNCLNSCEVYDPECN--Q-WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVT--KTWSQVPDMYNPR 687 (824)
Q Consensus 613 ~~~~~~~v~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~r 687 (824)
.....+.++.+|..+. . |..+.+-...... .....++.||+....+ .....++.+|+.+ ..|+.+-+-...
T Consensus 289 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~- 364 (741)
T 1yr2_A 289 GTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD-FVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKD- 364 (741)
T ss_dssp TTCSCCEEEEEEEETTEECCCEEEECSSSSCEE-EEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSS-
T ss_pred cCCCcceEEEEECCCCCCcccEEecCCCCceEE-EEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCC-
Confidence 2223568899998877 6 8777543322222 2234567777775432 2245799999887 578887432211
Q ss_pred cceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 688 SNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 688 ~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
.-.++...+++|++....++ ...++++|++.+.-..+
T Consensus 365 ~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 365 NLESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEEC
T ss_pred eEEEEEEECCEEEEEEEECC---EEEEEEEeCCCCceeec
Confidence 11233445888888876544 34688888765544443
No 237
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.85 E-value=15 Score=39.07 Aligned_cols=197 Identities=12% Similarity=0.057 Sum_probs=107.2
Q ss_pred EEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCC
Q psy17309 503 GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYT 579 (824)
Q Consensus 503 ~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 579 (824)
++++. ++.||+.... ...+.++|+.+++-..+..... ..+ ++.. ++.||+..... ...++++|+.
T Consensus 135 ~la~d~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~--~~~-ia~~~~g~~l~~~d~~~----~~~I~~~d~~ 202 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFK--GGK-PAVTKDKQRVYSIGWEG----THTVYVYMKA 202 (409)
T ss_dssp EEEECSTTEEEEEETT-----TTEEEEEETTTTEEEEEEETCC--BCB-CEECTTSSEEEEEBSST----TCEEEEEEGG
T ss_pred EEEEeCCCCEEEEecC-----CCcEEEEECCCCEEEEeeccCC--CCc-eeEecCCCcEEEEecCC----CceEEEEEcC
Confidence 34443 6789988742 2579999999877665543321 112 2222 44677764321 1279999987
Q ss_pred CCc-EEeecCCC--cccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC---CCCCCCcc-e-EEEEE-
Q psy17309 580 ENQ-WSLIAPMN--VERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE---PMRHRRSG-V-SCIAY- 648 (824)
Q Consensus 580 t~~-W~~~~~~p--~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~-~-~~~~~- 648 (824)
+.. ...+...+ ....-+++++. ++.||+... ...+++||+.+.....+. ........ . ..+..
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYF 276 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEET
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeC
Confidence 653 23331111 11222334433 689999432 247999999887765552 11111222 1 44444
Q ss_pred -CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCC--CC--------C-CcceEEEEE--CCEEEEEcc-CCCCceeeE
Q psy17309 649 -HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM--YN--------P-RSNFAIEVI--DDMIFAIGG-FNGVTTIYH 713 (824)
Q Consensus 649 -~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~--------~-r~~~~~~~~--~~~i~v~GG-~~~~~~~~~ 713 (824)
++.||+.... .+.|++||+....-...... +. . -......++ ++.||+... .+ ..
T Consensus 277 ~~g~lyv~d~~-----~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~-----~~ 346 (409)
T 3hrp_A 277 VDSNFYMSDQN-----LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG-----YC 346 (409)
T ss_dssp TTTEEEEEETT-----TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT-----CE
T ss_pred CCCEEEEEeCC-----CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC-----CE
Confidence 5899998643 35789999876522222111 00 0 011222333 577999854 32 36
Q ss_pred EEEEECCCCcEEec
Q psy17309 714 VECYDEKTDEWYEA 727 (824)
Q Consensus 714 v~~yd~~~~~W~~~ 727 (824)
|.++|+.+..-+.+
T Consensus 347 I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 347 LRKLDILDGYVSTV 360 (409)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEECCCCEEEEE
Confidence 88999766665544
No 238
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=91.83 E-value=13 Score=38.11 Aligned_cols=184 Identities=9% Similarity=-0.026 Sum_probs=96.8
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEE-EECCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA-VHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++.+|+++.. ...+++||+.+++...... +. .-.+++ .-++.+++... ..+++||+.+.+.+.+
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHAL-PF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLH 124 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEEC-SS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEEC-CC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEE
Confidence 3677877643 2579999999887654432 21 222333 34788887642 3599999999988776
Q ss_pred cCCCccc--CceEEEEE--CCEEEEEcccC-CCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEecCC
Q psy17309 587 APMNVER--SDASATTL--QGKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFN 659 (824)
Q Consensus 587 ~~~p~~r--~~~~~~~~--~~~lyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~ 659 (824)
...+... .......+ +|++|+..... .......+++|| +++.+.+.. ......+.+.. ++ .+|+....
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~- 199 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDTK- 199 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEETT-
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEECC-
Confidence 5433211 11112222 67887743211 112235688888 466554421 00111223322 44 57776532
Q ss_pred CCCccceEEEEeCC--CC-C------EEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 660 GMSRMCNGEKYNPV--TK-T------WSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 660 ~~~~~~~v~~yd~~--~~-~------W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
...+++||.. +. + +..+.. .........+ ++.||+....+ ..+.+||++...
T Consensus 200 ----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~---~~~~p~gi~~d~~G~lwva~~~~-----~~v~~~d~~g~~ 262 (326)
T 2ghs_A 200 ----VNRLMRVPLDARTGLPTGKAEVFIDSTG---IKGGMDGSVCDAEGHIWNARWGE-----GAVDRYDTDGNH 262 (326)
T ss_dssp ----TCEEEEEEBCTTTCCBSSCCEEEEECTT---SSSEEEEEEECTTSCEEEEEETT-----TEEEEECTTCCE
T ss_pred ----CCEEEEEEcccccCCcccCceEEEECCC---CCCCCCeeEECCCCCEEEEEeCC-----CEEEEECCCCCE
Confidence 2578899875 33 2 222211 1111222333 57788764211 268899995543
No 239
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.82 E-value=17 Score=42.37 Aligned_cols=181 Identities=14% Similarity=0.110 Sum_probs=99.4
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 587 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~ 587 (824)
++.|++... +.+.+||+.++++...... ....-.+++..++.|++... +.+++||+.+++++...
T Consensus 73 ~g~lWigT~-------~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt~-------~Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 73 NTYLYMGTD-------NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGAL-------NGLYTYQLQSRKLTSFD 137 (758)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEC
T ss_pred CCcEEEEeC-------CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEcC-------CcceeEeCCCCeEEEec
Confidence 567776532 4588999999887642111 11112233445788888532 36899999999887763
Q ss_pred C----CCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCC-----CcceEEEEE-C-CEEEEE
Q psy17309 588 P----MNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR-----RSGVSCIAY-H-ECIYVI 655 (824)
Q Consensus 588 ~----~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-----r~~~~~~~~-~-~~iyv~ 655 (824)
. ++... -.+++.- ++.|+|.. . .-+.+||+.+++++.... +.. ..-.+.+.. + +.|||-
T Consensus 138 ~~~~~l~~~~-i~~i~~d~~g~lWigt--~-----~Gl~~~~~~~~~~~~~~~-~~~~~~~~~~i~~i~~d~~~~~lWig 208 (758)
T 3ott_A 138 TRRNGLPNNT-IYSIIRTKDNQIYVGT--Y-----NGLCRYIPSNGKFEGIPL-PVHSSQSNLFVNSLLEDTTRQCVWIG 208 (758)
T ss_dssp HHHHCCSCSC-EEEEEECTTCCEEEEE--T-----TEEEEEETTTTEEEEECC-CCCTTCSSCCEEEEEEETTTTEEEEE
T ss_pred cCCCCcCCCe-EEEEEEcCCCCEEEEe--C-----CCHhhCccCCCceEEecC-CCccccccceeEEEEEECCCCEEEEE
Confidence 2 22211 1122222 67888732 1 347899999988876532 211 111223333 2 357773
Q ss_pred ecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 656 GGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
.. ..+.+||+.+.++.....++.. .-.+++.- ++.|+|.- . .-+.+||+.++.+..+
T Consensus 209 t~-------~Gl~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT-~------~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 209 TE-------GYLFQYFPSTGQIKQTEAFHNN-SIKSLALDGNGDLLAGT-D------NGLYVYHNDTTPLQHI 266 (758)
T ss_dssp EE-------EEEEEEETTTTEEEEEEEEEEE-EEEEEEECTTCCEEEEE-T------TEEEEECCTTSCCEEE
T ss_pred EC-------CCCeEEcCCCCeEEeccCCCCC-eEEEEEEcCCCCEEEEe-C------CceeEEecCCCcEEEE
Confidence 21 2578999998888765432211 01111111 56666642 1 1367788877776554
No 240
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=91.77 E-value=13 Score=38.06 Aligned_cols=209 Identities=8% Similarity=-0.046 Sum_probs=106.3
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
+.+++++.. ...++.||+.+++...+... ..-.+++.. ++.+++... +.+++||+.+++...
T Consensus 61 ~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~~-----~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 61 GTAWWFNIL-----ERELHELHLASGRKTVHALP-----FMGSALAKISDSKQLIASD-------DGLFLRDTATGVLTL 123 (326)
T ss_dssp TEEEEEEGG-----GTEEEEEETTTTEEEEEECS-----SCEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEE
T ss_pred CEEEEEECC-----CCEEEEEECCCCcEEEEECC-----CcceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEE
Confidence 456665432 24688999988876553221 122333333 778777542 359999999998877
Q ss_pred eccCCC----CcceEEEEEECCEEEEEeccc-CCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CC-EEEEEccc
Q psy17309 539 IAPMNF----KRCYVSTAVHQDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGF 611 (824)
Q Consensus 539 ~~~~~~----~r~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~ 611 (824)
+...+. .+.....+.-+|.+|+..... .......++++| +.+.+.+.. ......+.+.. ++ .+|+....
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEETT
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEECC
Confidence 654322 122222222367787743211 112345789998 465554421 00111233333 44 67876432
Q ss_pred CCCCcCCceEEEeCC--CC-e------EEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEEC
Q psy17309 612 NGHNCLNSCEVYDPE--CN-Q------WTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 680 (824)
Q Consensus 612 ~~~~~~~~v~~yd~~--~~-~------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 680 (824)
...+++||.. ++ . +.... ..........+ +|.||+.... ...+.+||+....-..+
T Consensus 200 -----~~~I~~~d~~~~~Gl~~~~~~~~~~~~---~~~~~p~gi~~d~~G~lwva~~~-----~~~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 200 -----VNRLMRVPLDARTGLPTGKAEVFIDST---GIKGGMDGSVCDAEGHIWNARWG-----EGAVDRYDTDGNHIARY 266 (326)
T ss_dssp -----TCEEEEEEBCTTTCCBSSCCEEEEECT---TSSSEEEEEEECTTSCEEEEEET-----TTEEEEECTTCCEEEEE
T ss_pred -----CCEEEEEEcccccCCcccCceEEEECC---CCCCCCCeeEECCCCCEEEEEeC-----CCEEEEECCCCCEEEEE
Confidence 2578889875 44 2 22221 11111222333 5788887521 14689999954433333
Q ss_pred CCCCCCCcceEEEEE---C-CEEEEEccC
Q psy17309 681 PDMYNPRSNFAIEVI---D-DMIFAIGGF 705 (824)
Q Consensus 681 ~~~p~~r~~~~~~~~---~-~~i~v~GG~ 705 (824)
. +|. .....+.+ + +.||+....
T Consensus 267 ~-~~~--~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 267 E-VPG--KQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp E-CSC--SBEEEEEEESTTSCEEEEEEBC
T ss_pred E-CCC--CCcEEEEEecCCCCEEEEEecC
Confidence 2 222 22333333 2 467776543
No 241
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=91.36 E-value=14 Score=37.83 Aligned_cols=183 Identities=10% Similarity=0.136 Sum_probs=87.6
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCc----e-EEeccCCCCcce-EEEEEE-CCEEEEEecccCCCCCCeEEEEeCCC
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKV----W-KEIAPMNFKRCY-VSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTE 580 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~----W-~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t 580 (824)
++.+++.||.+ ..+..||..+.. . .....+...... .+++.. ++.+.+.|+.+ ..+..||..+
T Consensus 38 d~~~l~sgs~D-----~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D-----~~v~lwd~~~ 107 (343)
T 2xzm_R 38 DSPVLISGSRD-----KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD-----KTLRLWDLRT 107 (343)
T ss_dssp CCCEEEEEETT-----SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT-----SEEEEEETTS
T ss_pred CCCEEEEEcCC-----CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC-----CcEEEEECCC
Confidence 45667777755 346677765432 1 111111111111 122222 55666777654 5688899887
Q ss_pred CcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEEC---------
Q psy17309 581 NQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYH--------- 649 (824)
Q Consensus 581 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--------- 649 (824)
.+.... +.........+.+ +++.++.||.+ ..+..||.....-..............++.+.
T Consensus 108 ~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 180 (343)
T 2xzm_R 108 GTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKV 180 (343)
T ss_dssp SCEEEE--EECCCSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCC
T ss_pred CcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCceeeeecccCCCceeeeeeecccccccccc
Confidence 754221 1111111122222 56666777755 46778887644333222222222222223221
Q ss_pred ---CEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECC
Q psy17309 650 ---ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 720 (824)
Q Consensus 650 ---~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 720 (824)
+.+++.|+.+ ..+..||.....-..+. ........+.+ +++.++.|+.++ .+.+||..
T Consensus 181 ~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~---~h~~~v~~~~~s~~g~~l~sgs~dg-----~v~iwd~~ 243 (343)
T 2xzm_R 181 QPFAPYFASVGWD-----GRLKVWNTNFQIRYTFK---AHESNVNHLSISPNGKYIATGGKDK-----KLLIWDIL 243 (343)
T ss_dssp CSSCCEEEEEETT-----SEEEEEETTTEEEEEEE---CCSSCEEEEEECTTSSEEEEEETTC-----EEEEEESS
T ss_pred CCCCCEEEEEcCC-----CEEEEEcCCCceeEEEc---CccccceEEEECCCCCEEEEEcCCC-----eEEEEECC
Confidence 1466667654 46777884322111111 11111222233 678888888765 67888874
No 242
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=91.26 E-value=18 Score=41.50 Aligned_cols=253 Identities=10% Similarity=0.021 Sum_probs=126.2
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCC--------cccceEEEEEC
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGN--------EYYNSCRCFNA 531 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~--------~~~~~~~~yd~ 531 (824)
+..++++-...+.....++.+|..+++...... +..+.. +.+..+++-++++..+.. .....+++++.
T Consensus 140 g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~---~~~k~~-~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~l 215 (693)
T 3iuj_A 140 GRILAYSLSLAGSDWREIHLMDVESKQPLETPL---KDVKFS-GISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRL 215 (693)
T ss_dssp SSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE---EEEESC-CCEEETTTEEEEEESSCCC-------CCCCEEEEEET
T ss_pred CCEEEEEEecCCCceEEEEEEECCCCCCCcccc---CCceec-cEEEeCCCEEEEEEecCcccccccccCCCcEEEEEEC
Confidence 344444333333334578899999888755311 101111 112225443334333211 23456888887
Q ss_pred CCCce--EEeccCCC--CcceEEEE-EECCEEEEEecccCCCCCCeEEEEeCCCC--cEEeecCCCcccCceEEEEECCE
Q psy17309 532 VTKVW--KEIAPMNF--KRCYVSTA-VHQDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSLIAPMNVERSDASATTLQGK 604 (824)
Q Consensus 532 ~~~~W--~~~~~~~~--~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~~~ 604 (824)
.+..= ..+...+. +....++. .-+++..++....+ ...+.++.+|..+. .|..+.+-...... ....-+++
T Consensus 216 gt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~ 293 (693)
T 3iuj_A 216 GTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGST 293 (693)
T ss_dssp TSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTE
T ss_pred CCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCE
Confidence 76542 12222222 22222322 23555443332221 12368999998765 67776443222211 13345789
Q ss_pred EEEEcccCCCCcCCceEEEeCCCC---eEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECC
Q psy17309 605 IYITGGFNGHNCLNSCEVYDPECN---QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP 681 (824)
Q Consensus 605 lyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 681 (824)
+|+....+. ....+..+|..+. .|+.+.+-..... +....++.|++..-.++ ...++++|+.......+.
T Consensus 294 l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 294 LYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA 366 (693)
T ss_dssp EEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEEC
T ss_pred EEEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEee
Confidence 998865432 2457888998763 4887654332222 44555677766543322 357889998866555543
Q ss_pred CCCCCCcceEEEE-EC-CEEEEEccCCCCceeeEEEEEECCCCcEEecc
Q psy17309 682 DMYNPRSNFAIEV-ID-DMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 682 ~~p~~r~~~~~~~-~~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (824)
+|.......... .+ +.|++... +. ..-..++.||..+++++.+.
T Consensus 367 -~p~~~~~~~~~~~~d~~~l~~~~s-s~-~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 367 -LPGLGSVSGFNGKHDDPALYFGFE-NY-AQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp -CSSSSEEEECCCCTTCSCEEEEEE-CS-SSCCEEEEECTTTCCEEEEE
T ss_pred -cCCCceEEeeecCCCCCEEEEEec-CC-CCCCEEEEEECCCCeEEEEE
Confidence 232211111111 12 34444321 11 12247899999888877663
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.22 E-value=7 Score=45.09 Aligned_cols=118 Identities=14% Similarity=0.202 Sum_probs=72.2
Q ss_pred EEEECCEEEEEecccCCCCCCeEEEEeCCCCc--EEeecCCCcc--------cCceEEEEECCEEEEEcccCCCCcCCce
Q psy17309 551 TAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVE--------RSDASATTLQGKIYITGGFNGHNCLNSC 620 (824)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~v 620 (824)
-++.++.||+.+.. ..++.+|..|.+ |+.-...+.. ....+.++.+++||+... ...+
T Consensus 66 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRL 133 (689)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEE
Confidence 35679999997652 468999988765 8764433211 112234567899888542 2468
Q ss_pred EEEeCCCCe--EEEcCC-CCC--CCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC--EEEC
Q psy17309 621 EVYDPECNQ--WTLIEP-MRH--RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 680 (824)
Q Consensus 621 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 680 (824)
..+|.+|++ |+.-.. -+. .....+-++.++.+|+-.+.........+..||..+.+ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998875 876543 111 11122335568888874432222234579999998875 8753
No 244
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=90.97 E-value=9.4 Score=43.93 Aligned_cols=187 Identities=10% Similarity=0.064 Sum_probs=94.8
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++.+++.|+.+ ..+..||..+++-...-.-.. ..-.+++.. ++..++.|+.+ ..+.++|.....-..+
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFVGHT-KDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTI 509 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS-SCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEeCCC-CCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceee
Confidence 66777777754 468899988765322111111 111222222 56666777754 4577788765432222
Q ss_pred cC-CCcccCceEEEEE--CC--EEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCC
Q psy17309 587 AP-MNVERSDASATTL--QG--KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 659 (824)
Q Consensus 587 ~~-~p~~r~~~~~~~~--~~--~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 659 (824)
.. ....+....++.+ ++ .+++.|+.+ ..+..||..+.+-... +........++.+ ++++++.||.+
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 22 1112222233333 22 456666655 4688899877654322 1111222233333 67888888864
Q ss_pred CCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 660 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
..+.++|..+.+-.. .+.....-.+++...+..++++|.+. .+.+||..+.+-
T Consensus 583 -----g~i~iwd~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~~~~~~-----~i~iwd~~~~~~ 635 (694)
T 3dm0_A 583 -----GVVLLWDLAEGKKLY--SLEANSVIHALCFSPNRYWLCAATEH-----GIKIWDLESKSI 635 (694)
T ss_dssp -----SBCEEEETTTTEEEE--CCBCSSCEEEEEECSSSSEEEEEETT-----EEEEEETTTTEE
T ss_pred -----CeEEEEECCCCceEE--EecCCCcEEEEEEcCCCcEEEEEcCC-----CEEEEECCCCCC
Confidence 467788887764322 22222222333333333334444332 488899887654
No 245
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=90.82 E-value=18 Score=41.87 Aligned_cols=252 Identities=12% Similarity=0.006 Sum_probs=126.7
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCce-eEEEEE-CCEEEEEeecCCC---------cccceEEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAY-HGTAVI-GYNIYVIGGFDGN---------EYYNSCRC 528 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~-~~~~~~-~~~lyv~GG~~~~---------~~~~~~~~ 528 (824)
+..++++....+.....++.+|..+++....... ... .+.+.. + +-++++..+.. .....++.
T Consensus 174 G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~-----~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~ 247 (741)
T 1yr2_A 174 GRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK-----WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWL 247 (741)
T ss_dssp SSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE-----EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEE
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC-----CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEE
Confidence 3444444333333335688999998887552110 000 112222 3 33333333221 12356888
Q ss_pred EECCCCce--EEeccCCC-CcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCC--c-EEeecCCCcccCceEEEEE
Q psy17309 529 FNAVTKVW--KEIAPMNF-KRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTEN--Q-WSLIAPMNVERSDASATTL 601 (824)
Q Consensus 529 yd~~~~~W--~~~~~~~~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~--~-W~~~~~~p~~r~~~~~~~~ 601 (824)
++..+..- ..+...+. +........ -+|+..++....+....+.++.+|..+. . |..+.+-....... +..-
T Consensus 248 ~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~d 326 (741)
T 1yr2_A 248 HRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGV 326 (741)
T ss_dssp EETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEE
T ss_pred EECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-Eecc
Confidence 88876542 12222221 222223322 3554444443332223578999999877 6 87775433222221 2234
Q ss_pred CCEEEEEcccCCCCcCCceEEEeCCC--CeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEE
Q psy17309 602 QGKIYITGGFNGHNCLNSCEVYDPEC--NQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ 679 (824)
Q Consensus 602 ~~~lyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 679 (824)
++.||+....+ .....++.+|..+ ..|+.+-+-... .-......++.|++....++ ...++.+|+....-..
T Consensus 327 g~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~ 400 (741)
T 1yr2_A 327 GDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGA 400 (741)
T ss_dssp TTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEE
T ss_pred CCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEECC---EEEEEEEeCCCCceee
Confidence 67777764332 2245689999887 579887532221 11223444888888775433 3568888876554444
Q ss_pred CCCCCCCCcceEEEEE--CC-EEEEEccCCCCceeeEEEEEECCCCcEEecc
Q psy17309 680 VPDMYNPRSNFAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 680 ~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (824)
+. +|.... ...... ++ .|++... + ...-.+++.||..+++.+.+.
T Consensus 401 l~-~~~~~~-v~~~~~s~d~~~l~~~~s-s-~~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 401 VS-LPGIGS-ASGLSGRPGDRHAYLSFS-S-FTQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp CB-CSSSCE-EEEEECCBTCSCEEEEEE-E-TTEEEEEEEEETTTTEEEECS
T ss_pred cc-CCCCeE-EEEeecCCCCCEEEEEEc-C-CCCCCEEEEEECCCCcEEEEe
Confidence 42 222111 111222 33 3443321 1 112347899999998877663
No 246
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=90.51 E-value=7 Score=43.86 Aligned_cols=192 Identities=10% Similarity=-0.032 Sum_probs=101.4
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 587 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~ 587 (824)
++.++++.+.. +.+..||..+++-..+...+. ......-+|+..++++.+... ...++++|+.+.+++.+.
T Consensus 121 g~~~~~~s~~~-----~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 121 GEAVVFTGATE-----DRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp SSCEEEEEECS-----SCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEEC
T ss_pred CCeEEEEecCC-----CCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEee
Confidence 44555555432 234477888887766654433 222333466666655543221 245999999999888775
Q ss_pred CCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceE-----E--EEECCEEEEEecCC
Q psy17309 588 PMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVS-----C--IAYHECIYVIGGFN 659 (824)
Q Consensus 588 ~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~-----~--~~~~~~iyv~GG~~ 659 (824)
.-+... ...+.. +|+.++.+..++ ...++.+|.++++...+..........+ . ..-+|++++.+..+
T Consensus 192 ~~~~~~--~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 192 SGEGSF--SSASISPGMKVTAGLETAR---EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp CSSCEE--EEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred cCCCcc--ccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence 433221 222222 565544433222 2478999999988773322111101111 0 22366777777643
Q ss_pred CCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 660 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
..+..|+. .+... .+.. ...+++.-++++++.++... ....++.+|..+ +.+.+
T Consensus 267 -----g~~~l~~~--g~~~~---~~~~-~v~~~~~sdg~~l~~~s~~~--~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 267 -----GRSAVFID--GERVE---APQG-NHGRVVLWRGKLVTSHTSLS--TPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp -----TEEEEEET--TEEEC---CCSS-EEEEEEEETTEEEEEEEETT--EEEEEEEETTCC-EEECC
T ss_pred -----CcEEEEEE--CCeec---cCCC-ceEEEEecCCEEEEEEcCCC--CCCeEEEEcCCC-ceEEE
Confidence 35667776 44332 2221 11222222888887766443 234688888765 55544
No 247
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.36 E-value=2.8 Score=45.08 Aligned_cols=187 Identities=6% Similarity=0.044 Sum_probs=88.4
Q ss_pred CEEEEEeecCCCcccceEEEEECCCC--------ceEEeccCCCC-cceEEEEEE-CCE-EEEEecccCCCCCCeEEEEe
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTK--------VWKEIAPMNFK-RCYVSTAVH-QDV-IYAMGGYNGQRRQNSVEKYN 577 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~--------~W~~~~~~~~~-r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd 577 (824)
+.+++.|+.+ ..+..||..+. ....+..+... ....+++.. ++. +++.|+.+ ..+.+||
T Consensus 141 ~~~lat~~~d-----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd 210 (430)
T 2xyi_A 141 ACVIATKTPS-----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD-----HTICLWD 210 (430)
T ss_dssp EEEEEEECSS-----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT-----SCEEEEE
T ss_pred CcEEEEECCC-----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC-----CeEEEEe
Confidence 4577777644 35888887651 12111111111 111223332 334 67777643 4578888
Q ss_pred CCCC---cEEe--ecCCC-cccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCe-EEEcCCCCCCCcceEEEEE
Q psy17309 578 YTEN---QWSL--IAPMN-VERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRHRRSGVSCIAY 648 (824)
Q Consensus 578 ~~t~---~W~~--~~~~p-~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~ 648 (824)
+.+. .+.. ...+. ....-.+++.. ++.+++.|+.+ ..+..||..+.. ...+..+........++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 285 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF 285 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence 8762 1211 11111 11112223332 46677777654 468889987652 1111111111122233333
Q ss_pred --CC-EEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE---CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 649 --HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 649 --~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
++ .+++.|+.+ ..|.+||..+.. ..+..+.........+.+ +..+++.||.++ .+.+||..+
T Consensus 286 ~p~~~~~l~tg~~d-----g~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~-----~i~iwd~~~ 353 (430)
T 2xyi_A 286 NPYSEFILATGSAD-----KTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSK 353 (430)
T ss_dssp CSSCTTEEEEEETT-----SEEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-----CCEEEEGGG
T ss_pred CCCCCCEEEEEeCC-----CeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC-----cEEEEeCCC
Confidence 23 488888864 468899987532 011111111112222233 336788887665 467777665
No 248
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=90.22 E-value=16 Score=36.46 Aligned_cols=227 Identities=10% Similarity=0.031 Sum_probs=103.5
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEe
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 539 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 539 (824)
+..++.|+. ...+..||..+.+-...... . ..........+.+.+.|+.+ ..+..++..+......
T Consensus 79 ~~~l~sgs~-----Dg~v~iw~~~~~~~~~~~~~--h--~~~~~~~~~~~~~l~s~~~~-----~~~~~~~~~~~~~~~~ 144 (318)
T 4ggc_A 79 GNYLAVGTS-----SAEVQLWDVQQQKRLRNMTS--H--SARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVA 144 (318)
T ss_dssp SSEEEEEET-----TSEEEEEETTTTEEEEEEEC--C--SSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred CCEEEEEEC-----CCcEEEeecCCceeEEEecC--c--cceEEEeecCCCEEEEEecC-----CceEeeecCCCceeEE
Confidence 345566653 24688899888765432111 1 11122233345566666543 3345555555433221
Q ss_pred ccCCCCcceEEE-EEECCEEEEEecccCCCCCCeEEEEeCCCCcEE--eecCCCcccCc-eEEEEE--CC-EEEEEcccC
Q psy17309 540 APMNFKRCYVST-AVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWS--LIAPMNVERSD-ASATTL--QG-KIYITGGFN 612 (824)
Q Consensus 540 ~~~~~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~--~~~~~p~~r~~-~~~~~~--~~-~lyv~GG~~ 612 (824)
............ ...++..++.|+.+ ..+.+||..+.+-. ........... .+.+.. ++ .+.+.+|..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred EEcCccCceEEEEEcCCCCEEEEEecC-----cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 111111111222 22355666666643 35778887764311 11111111111 111222 23 334444432
Q ss_pred CCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEE
Q psy17309 613 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 692 (824)
Q Consensus 613 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 692 (824)
...+..+|..+..-..................++.+++.+|.. -..+.+||..+.+- +..+.........
T Consensus 220 ----~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~----d~~i~iwd~~~~~~--~~~l~gH~~~V~~ 289 (318)
T 4ggc_A 220 ----DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA----QNQLVIWKYPTMAK--VAELKGHTSRVLS 289 (318)
T ss_dssp ----TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT----TCCEEEEETTTCCE--EEEECCCSSCEEE
T ss_pred ----CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcC----CCEEEEEECCCCcE--EEEEcCCCCCEEE
Confidence 2457788887766444332222211111122245566655532 24688899876542 2222211222222
Q ss_pred EEE--CCEEEEEccCCCCceeeEEEEEECC
Q psy17309 693 EVI--DDMIFAIGGFNGVTTIYHVECYDEK 720 (824)
Q Consensus 693 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 720 (824)
+.+ ++++++.||.++ .|.+||..
T Consensus 290 l~~spdg~~l~S~s~D~-----~v~iWd~~ 314 (318)
T 4ggc_A 290 LTMSPDGATVASAAADE-----TLRLWRCF 314 (318)
T ss_dssp EEECTTSSCEEEEETTT-----EEEEECCS
T ss_pred EEEcCCCCEEEEEecCC-----eEEEEECC
Confidence 333 678888888776 56667654
No 249
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=90.15 E-value=0.07 Score=44.10 Aligned_cols=63 Identities=21% Similarity=0.193 Sum_probs=43.5
Q ss_pred eeecceEEEE--c-ccccccccceeEEeeecccchhhhheeecccc-----------eecCHhhHHHHHHHHhhcCh
Q psy17309 227 AVHQDVIYAM--G-GYNGQRRQNSVEKYNYTENQDKIEEKKLFERK-----------LHITEDNVASLLLATDFFCM 289 (824)
Q Consensus 227 ~~~~~~~~~~--~-g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~-----------l~l~~~~v~~ll~~a~~~~i 289 (824)
+..+..+..| . |.+.|...+.|.+++++..+++.+++|+|.-. -.+..+.+.+|+.||++|++
T Consensus 20 A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 20 ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence 4455555555 1 44466667889999999999999999997643 25777889999999999875
No 250
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=90.02 E-value=12 Score=37.94 Aligned_cols=222 Identities=9% Similarity=0.054 Sum_probs=104.7
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEE
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 538 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 538 (824)
+..++.|+. ...+..||..+++-...-.. ....-.+++.. ++.+++.|+.+ ..+..||.....-..
T Consensus 77 g~~l~s~s~-----D~~v~~wd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 77 GAYALSASW-----DKTLRLWDVATGETYQRFVG---HKSDVMSVDIDKKASMIISGSRD-----KTIKVWTIKGQCLAT 143 (319)
T ss_dssp SSEEEEEET-----TSEEEEEETTTTEEEEEEEC---CSSCEEEEEECTTSCEEEEEETT-----SCEEEEETTSCEEEE
T ss_pred CCEEEEEeC-----CCEEEEEECCCCCeeEEEcc---CCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEE
Confidence 344555553 24688899888764331011 01111222222 56677777755 357788886554333
Q ss_pred eccCCCCcceEEEEEE-------CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEc
Q psy17309 539 IAPMNFKRCYVSTAVH-------QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITG 609 (824)
Q Consensus 539 ~~~~~~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~G 609 (824)
+..-.. .-.++... ++..++.||.+ ..+..+|..+.+-.. .+.........+.+ ++++++.|
T Consensus 144 ~~~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 144 LLGHND--WVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ECCCSS--CEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEEE
T ss_pred EeccCC--cEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEEE
Confidence 221111 11112221 23356666643 457888887654322 11111112222222 67778888
Q ss_pred ccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCC-EEECC-CCCCC
Q psy17309 610 GFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKT-WSQVP-DMYNP 686 (824)
Q Consensus 610 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~-~~p~~ 686 (824)
|.+ ..+..||..+.+-... +.....-.+++.. ++.+++.+.. ..+.+|+..... ...+. .....
T Consensus 215 ~~d-----g~i~iwd~~~~~~~~~--~~~~~~v~~~~~sp~~~~la~~~~------~~i~v~~~~~~~~~~~~~~~~~~~ 281 (319)
T 3frx_A 215 GKD-----GEIMLWNLAAKKAMYT--LSAQDEVFSLAFSPNRYWLAAATA------TGIKVFSLDPQYLVDDLRPEFAGY 281 (319)
T ss_dssp ETT-----CEEEEEETTTTEEEEE--EECCSCEEEEEECSSSSEEEEEET------TEEEEEEETTEEEEEEECCCCTTC
T ss_pred eCC-----CeEEEEECCCCcEEEE--ecCCCcEEEEEEcCCCCEEEEEcC------CCcEEEEeCcCeeeeccCcccccc
Confidence 765 3688899877652211 1111112222222 4555554442 345566655432 22221 11110
Q ss_pred ----CcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 687 ----RSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 687 ----r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
......+.+ +++.++.|+.++ .+.+||..+
T Consensus 282 ~~~~~~~v~~~~~spdg~~l~sg~~Dg-----~i~vWd~~t 317 (319)
T 3frx_A 282 SKAAEPHAVSLAWSADGQTLFAGYTDN-----VIRVWQVMT 317 (319)
T ss_dssp CGGGCCCEEEEEECTTSSEEEEEETTS-----CEEEEEEEE
T ss_pred ccCcCcceeEEEECCCCCEEEEeecCc-----eEEEEEEee
Confidence 011112222 788888888766 466676544
No 251
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=90.02 E-value=1.9 Score=41.77 Aligned_cols=99 Identities=14% Similarity=0.151 Sum_probs=59.9
Q ss_pred ECCEEEEEecccCCCCCCeEEEEeCCC----CcEEee--------cCCCcc--cCceEEEEE---CCEEEEEcccCCCCc
Q psy17309 554 HQDVIYAMGGYNGQRRQNSVEKYNYTE----NQWSLI--------APMNVE--RSDASATTL---QGKIYITGGFNGHNC 616 (824)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd~~t----~~W~~~--------~~~p~~--r~~~~~~~~---~~~lyv~GG~~~~~~ 616 (824)
.++++|+|-| +.+|+||..+ +....- +.+|.. ....-+|.. ++++|+|-|
T Consensus 69 ~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG------ 135 (225)
T 3oyo_A 69 EASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG------ 135 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET------
T ss_pred CCCeEEEEcC-------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC------
Confidence 5899999988 6789997532 222111 223331 112333333 689999987
Q ss_pred CCceEEEeCCCCeEEEc----C-CCCC------CCcceEEEE--ECCEEEEEecCCCCCccceEEEEeCC
Q psy17309 617 LNSCEVYDPECNQWTLI----E-PMRH------RRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPV 673 (824)
Q Consensus 617 ~~~v~~yd~~~~~W~~~----~-~~p~------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~ 673 (824)
+..++||..+++...- . ..|. +..--++.. .++++|++-| +..++||..
T Consensus 136 -~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 136 -NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp -TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred -CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 5678898776655431 1 1221 222233444 3799999988 578999987
No 252
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=89.98 E-value=24 Score=40.59 Aligned_cols=209 Identities=11% Similarity=-0.000 Sum_probs=110.2
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCC--------CCCCeEEEEeCC
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQ--------RRQNSVEKYNYT 579 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~--------~~~~~~~~yd~~ 579 (824)
+++.++++-..++.....++.+|..+++..... .+..+....+-. +++-++++..... .....+++++..
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lg 216 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLG 216 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETT
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECC
Confidence 566555544333333467999999999876542 111111122233 6543444333221 334678888887
Q ss_pred CCcE--EeecCCCc--ccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCC--eEEEcCCCCCCCcceEEEEECCEE
Q psy17309 580 ENQW--SLIAPMNV--ERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCIAYHECI 652 (824)
Q Consensus 580 t~~W--~~~~~~p~--~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i 652 (824)
+..= ..+-..+. +....++... +++..++....+ ...+.++.+|..+. .|..+.+-..... ......++.|
T Consensus 217 t~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l 294 (693)
T 3iuj_A 217 TAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTL 294 (693)
T ss_dssp SCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEE
T ss_pred CCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEE
Confidence 7542 12222222 2222222222 555443332221 12368899998765 6777654222221 1233457899
Q ss_pred EEEecCCCCCccceEEEEeCCCC---CEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 653 YVIGGFNGMSRMCNGEKYNPVTK---TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 653 yv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
|+....+. ....++..|+.+. .|+.+.+-.... . +....+++|++..-.++ ...++++|.+......+
T Consensus 295 ~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 295 YLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREV 365 (693)
T ss_dssp EEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEE
T ss_pred EEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEe
Confidence 99876432 2457899998763 488764322221 2 45555777776644332 34788999887655554
No 253
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=89.98 E-value=3 Score=39.38 Aligned_cols=143 Identities=14% Similarity=0.078 Sum_probs=79.5
Q ss_pred EEEEECCEEEEEeecCCCcccceEEEEECCC---CceEEec----cCCCCcceEEEEEECCEEEEEecccCCCCCCeEEE
Q psy17309 503 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVT---KVWKEIA----PMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEK 575 (824)
Q Consensus 503 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~---~~W~~~~----~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 575 (824)
+++..++.+|+|-| +.+|+++... +.=..+. .+|. ...++....++++|+|-| +.+|+
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg-------~~yw~ 74 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG-------DKHWV 74 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET-------TEEEE
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC-------CEEEE
Confidence 34466899999988 6688886432 1001121 2333 222222224789999988 67899
Q ss_pred EeCCCCcE---Eeec----CCCcccCceEEEE-ECCEEEEEcccCCCCcCCceEEEeCCCCeEEE-----cC---CCCCC
Q psy17309 576 YNYTENQW---SLIA----PMNVERSDASATT-LQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----IE---PMRHR 639 (824)
Q Consensus 576 yd~~t~~W---~~~~----~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~~---~~p~~ 639 (824)
|+..+... +.+. .+|......+... .++++|.+-| +..++||..+++-.. +. .+|.
T Consensus 75 ~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip~- 146 (196)
T 3c7x_A 75 FDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIPE- 146 (196)
T ss_dssp EETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCCS-
T ss_pred EeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcCC-
Confidence 98542110 1122 2442222222221 2689999977 467889987754221 11 2222
Q ss_pred CcceEEEEE-CC-EEEEEecCCCCCccceEEEEeCCCCC
Q psy17309 640 RSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 640 r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~ 676 (824)
.--++... ++ ++|++-| +..++||..+.+
T Consensus 147 -~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 147 -SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp -SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred -CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 22333333 44 8999988 578999987654
No 254
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=89.92 E-value=20 Score=37.20 Aligned_cols=115 Identities=11% Similarity=0.079 Sum_probs=58.7
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCC----CcccceEEEEECCC
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDG----NEYYNSCRCFNAVT 533 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~----~~~~~~~~~yd~~~ 533 (824)
..+|+.-........+.+..+|+.+.+-.. . .+..... .+++. +..+|+..-... +...+.+..||+.+
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~--~--i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLG--M--VPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEE--E--EECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEE--E--ecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 356665432222223578999998876543 1 1112222 33333 668898763211 12245689999987
Q ss_pred Cce-EEeccCCC----CcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 534 KVW-KEIAPMNF----KRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 534 ~~W-~~~~~~~~----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
.+- ..++..+. ...-+.++.. +..+|+.... ..+.+.++|..+++-
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----PATSIGIVDVAKGDY 143 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES----SSEEEEEEETTTTEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC----CCCeEEEEECCCCcE
Confidence 653 23322111 0111123322 4467776421 135788899888753
No 255
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.90 E-value=1.7 Score=46.95 Aligned_cols=145 Identities=11% Similarity=0.035 Sum_probs=79.9
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCC-CcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEE
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM-NVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT 631 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~-p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 631 (824)
++.+++.|+.+ ..+.+||..+..-...-.+ .....-.+++.. ++.+++.|+.+ ..+-.||.+++...
T Consensus 131 ~~~~lasGs~d-----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKG-----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-----GTTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETT-----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----SCEEEEETTSCEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEeeccCCcee
Confidence 45677778754 3578888877654332222 222222233332 56677777765 35788999887765
Q ss_pred EcCCCCCCCcc-eEEE-EECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE---CCEEEEEccCC
Q psy17309 632 LIEPMRHRRSG-VSCI-AYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFN 706 (824)
Q Consensus 632 ~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~ 706 (824)
.+......... .+++ .-++.+++.|+.+ ..+..+|..... +..+.........+.+ +..+++.|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 55432221111 1222 2367788888754 467888886543 2222222222233333 34577788766
Q ss_pred CCceeeEEEEEECCCC
Q psy17309 707 GVTTIYHVECYDEKTD 722 (824)
Q Consensus 707 ~~~~~~~v~~yd~~~~ 722 (824)
+ .+.+||..+.
T Consensus 273 ~-----~v~iwd~~~~ 283 (435)
T 4e54_B 273 Q-----TVKIWDLRQV 283 (435)
T ss_dssp S-----BCCEEETTTC
T ss_pred c-----eeeEEecccc
Confidence 5 4667887664
No 256
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=89.85 E-value=9 Score=44.08 Aligned_cols=186 Identities=11% Similarity=0.122 Sum_probs=94.5
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCc--eEE-eccCCCC-cceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKV--WKE-IAPMNFK-RCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~-~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
..+++.|+.+ ..+..||..+.. +.. ...+... ..-.+++. .++.+.+.|+.+ ..+.++|..+..-
T Consensus 395 ~~~l~s~s~D-----~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D-----g~v~vwd~~~~~~ 464 (694)
T 3dm0_A 395 ADIIVSASRD-----KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD-----GELRLWDLAAGVS 464 (694)
T ss_dssp CSEEEEEETT-----SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred CCEEEEEeCC-----CcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC-----CcEEEEECCCCcc
Confidence 3567777754 357777776532 111 1111111 11112222 266777777754 5688899887653
Q ss_pred EeecCCCcccCc-eEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC-CCCCCCcceEEEEE--CC--EEEEEe
Q psy17309 584 SLIAPMNVERSD-ASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAY--HE--CIYVIG 656 (824)
Q Consensus 584 ~~~~~~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~--~iyv~G 656 (824)
... +...... .+++.. ++..++.|+.+ ..+..||.....-..+. .....+....++.+ ++ ..++.|
T Consensus 465 ~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 537 (694)
T 3dm0_A 465 TRR--FVGHTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA 537 (694)
T ss_dssp EEE--EECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE
T ss_pred eeE--EeCCCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE
Confidence 221 1111111 122222 56667777765 46778887554322222 22222222333333 22 466667
Q ss_pred cCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 657 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 657 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
+.+ ..+.+||+.+.+-... +.........+.+ ++++++.||.++ .+.+||..+.+
T Consensus 538 s~d-----~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~~~~~ 594 (694)
T 3dm0_A 538 SWD-----KTVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKDG-----VVLLWDLAEGK 594 (694)
T ss_dssp ETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----BCEEEETTTTE
T ss_pred eCC-----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCc
Confidence 654 4688899877653322 1111112222333 678888888765 57788887764
No 257
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=89.61 E-value=14 Score=35.38 Aligned_cols=143 Identities=12% Similarity=0.087 Sum_probs=78.4
Q ss_pred EEEEECCEEEEEecccCCCCCCeEEEEeCCCCc-EE--ee----cCCCcccCceEEEEE---CCEEEEEcccCCCCcCCc
Q psy17309 550 STAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ-WS--LI----APMNVERSDASATTL---QGKIYITGGFNGHNCLNS 619 (824)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~--~~----~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~ 619 (824)
+++..++++|+|-| +.+|+++..... .. .+ +.+|. ..-+|.. ++++|+|-| +.
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~---~IDAA~~~~~~~k~yfFkG-------~~ 97 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE---KIDAVYEAPQEEKAVFFAG-------NE 97 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS---CCSEEEEETTTTEEEEEET-------TE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC---CccEEEEECCCCEEEEEeC-------CE
Confidence 34557999999988 567777654421 11 11 23442 2223332 689999977 56
Q ss_pred eEEEeCCCCe---EEEcC--CCCCCC-cceEEEE--ECCEEEEEecCCCCCccceEEEEeCCCCCEEE-----CC-C-CC
Q psy17309 620 CEVYDPECNQ---WTLIE--PMRHRR-SGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----VP-D-MY 684 (824)
Q Consensus 620 v~~yd~~~~~---W~~~~--~~p~~r-~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~~-~-~p 684 (824)
.++||..+-. =..+. .+|... .--++.. .++++|++-| +..++||..+++=.. +. . +.
T Consensus 98 yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g 170 (218)
T 1gen_A 98 YWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNA 170 (218)
T ss_dssp EEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSS
T ss_pred EEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCC
Confidence 7888742100 01121 123211 1223333 3699999988 578999987653111 10 0 11
Q ss_pred CCCcceEEEEEC--CEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 685 NPRSNFAIEVID--DMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 685 ~~r~~~~~~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
.+..--++...+ +++|++=|. ..|.||..+..
T Consensus 171 ~p~~idaAf~~~~~g~~YfFkg~-------~y~~~~~~~~~ 204 (218)
T 1gen_A 171 IPDNLDAVVDLQGGGHSYFFKGA-------YYLKLENQSLK 204 (218)
T ss_dssp CCSSCSEEEECTTTCEEEEEETT-------EEEEEETTEEE
T ss_pred CCCCCCEEEEEcCCCcEEEEECC-------EEEEEECCcee
Confidence 122233444444 899999663 67888876543
No 258
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.60 E-value=9.9 Score=41.00 Aligned_cols=142 Identities=11% Similarity=0.056 Sum_probs=80.8
Q ss_pred EEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEe--e----cCCCcccCceEEEE---ECCEEEEEcccCCCCcCCce
Q psy17309 550 STAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSL--I----APMNVERSDASATT---LQGKIYITGGFNGHNCLNSC 620 (824)
Q Consensus 550 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~--~----~~~p~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~v 620 (824)
+++..+|.+|+|-| ..+|+++.....+.. + +.+|.. .-++. .++++|+|-| +.+
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~---iDAa~~~~~~g~~~fFKg-------~~~ 329 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG---LEAAYEFADRDEVRFFKG-------NKY 329 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS---CCEEEEEGGGTEEEEEET-------TEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC---eeEEEEEcCCCeEEEEeC-------CEE
Confidence 45568999999988 457777665443321 1 234432 22332 2689999977 456
Q ss_pred EEEeCCC---CeEEEcC---CCCCC--CcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEE-----EC----C
Q psy17309 621 EVYDPEC---NQWTLIE---PMRHR--RSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWS-----QV----P 681 (824)
Q Consensus 621 ~~yd~~~---~~W~~~~---~~p~~--r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~----~ 681 (824)
++|+..+ +-=..+. .+|.. ... ++... ++++|+|-| +..|+||..+.+-. .+ +
T Consensus 330 W~~~~~~~~~gyP~~i~~~~g~P~~~~~ID-AA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fp 401 (450)
T 1su3_A 330 WAVQGQNVLHGYPKDIYSSFGFPRTVKHID-AALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFP 401 (450)
T ss_dssp EEEETTEECTTCSEEHHHHHCCCTTCCCCC-EEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHST
T ss_pred EEecCCcccCCCceeeehhhcCCCCCCccc-eEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCC
Confidence 7776432 1001111 12321 222 22233 699999988 58899997654211 11 1
Q ss_pred CCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEE
Q psy17309 682 DMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 725 (824)
Q Consensus 682 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (824)
.+| ..--++...++++|+|-|. ..|+||..+.+=.
T Consensus 402 gip--~~iDAA~~~~g~~YFFkg~-------~ywr~d~~~~~v~ 436 (450)
T 1su3_A 402 GIG--HKVDAVFMKDGFFYFFHGT-------RQYKFDPKTKRIL 436 (450)
T ss_dssp TSC--SCCSEEEEETTEEEEEETT-------EEEEEETTTTEEE
T ss_pred CCC--CCccEEEEcCCeEEEEeCC-------EEEEEECCcceEe
Confidence 222 2223444568999999764 6799998776543
No 259
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.50 E-value=23 Score=37.24 Aligned_cols=196 Identities=8% Similarity=-0.003 Sum_probs=110.2
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecC--CCcccCceEEE
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP--MNVERSDASAT 599 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~r~~~~~~ 599 (824)
+.+.++++.......+... ...-.+++.. ++.||+.-- ....++++++.....+.+.. +..+ .+++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p---~gla 165 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP---GGLA 165 (386)
T ss_dssp SCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECSSCSCC---CCEE
T ss_pred ccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCCCCc---cEEE
Confidence 5688888888776655432 1223445544 578998743 23679999998887665532 2222 2333
Q ss_pred E--ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC--CCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCC
Q psy17309 600 T--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPV 673 (824)
Q Consensus 600 ~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 673 (824)
+ .++.||+.-.. .+.+++++++...-+.+. .+..| .+.++. ++.||+.--.. ...|+++++.
T Consensus 166 vd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~d 233 (386)
T 3v65_B 166 VDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMD 233 (386)
T ss_dssp EETTTTEEEEEETT-----TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred EEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCC
Confidence 3 37899997542 246888887655433332 22222 233333 68899875321 3679999987
Q ss_pred CCCEEECCCCCCCCcceEEEE--ECCEEEEEccCCCCceeeEEEEEECCCCcEEec--cCCCCCccceeEEEEcCcccee
Q psy17309 674 TKTWSQVPDMYNPRSNFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA--TDMNIYRSALSACVIMGLPNVY 749 (824)
Q Consensus 674 ~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~~~~~~~~ 749 (824)
...-+.+..-. ...-.+++. .+++||+.-.. ...|+++|++...=..+ ..++.| .+.++..+.+|+-
T Consensus 234 G~~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~P---~giav~~~~ly~t 304 (386)
T 3v65_B 234 GSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQGLPHP---FAITVFEDSLYWT 304 (386)
T ss_dssp SCSCEEEECSS-CSCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEECSSCSSE---EEEEEETTEEEEE
T ss_pred CCCcEEEEECC-CCCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEECCCCCc---eEEEEECCEEEEe
Confidence 65433332110 111123443 27899998543 24789999875432322 222222 4555567777765
Q ss_pred c
Q psy17309 750 D 750 (824)
Q Consensus 750 ~ 750 (824)
.
T Consensus 305 d 305 (386)
T 3v65_B 305 D 305 (386)
T ss_dssp E
T ss_pred e
Confidence 3
No 260
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=88.91 E-value=3.9 Score=39.51 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=77.0
Q ss_pred ECCEEEEEecccCCCCCCeEEEEeC------CCCcEEe--e----cCCC---cccCceEEEE--ECCEEEEEcccCCCCc
Q psy17309 554 HQDVIYAMGGYNGQRRQNSVEKYNY------TENQWSL--I----APMN---VERSDASATT--LQGKIYITGGFNGHNC 616 (824)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd~------~t~~W~~--~----~~~p---~~r~~~~~~~--~~~~lyv~GG~~~~~~ 616 (824)
.+|.+|+|-| ..+|+++. ....... + +.+| ......-++. .++++|+|-|
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg------ 78 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG------ 78 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET------
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC------
Confidence 3789999987 56788871 1111111 1 2344 1123333443 4899999987
Q ss_pred CCceEEEeCCC----CeEEE----c----CCCCCC--CcceEEE-E--ECCEEEEEecCCCCCccceEEEEeCCCCCEEE
Q psy17309 617 LNSCEVYDPEC----NQWTL----I----EPMRHR--RSGVSCI-A--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ 679 (824)
Q Consensus 617 ~~~v~~yd~~~----~~W~~----~----~~~p~~--r~~~~~~-~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 679 (824)
+.+++||..+ +.... + +.+|.. ....-+| . .++++|+|-| +..++||...++-..
T Consensus 79 -~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG-------~~yw~~d~~~~~~~~ 150 (225)
T 3oyo_A 79 -NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG-------NKYVRIAYDSKQLVG 150 (225)
T ss_dssp -TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred -CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-------CeEEEEECCCCeecC
Confidence 4678886522 22211 1 233331 1122233 2 2699999998 578999976655432
Q ss_pred ----CC-CCCC------CCcceEEEE--ECCEEEEEccCCCCceeeEEEEEECC
Q psy17309 680 ----VP-DMYN------PRSNFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEK 720 (824)
Q Consensus 680 ----~~-~~p~------~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~ 720 (824)
+. ..|. +..--++.. .++++|++-|. ..|+||..
T Consensus 151 gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~-------~ywr~d~~ 197 (225)
T 3oyo_A 151 NIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ-------NYVRIDFT 197 (225)
T ss_dssp EEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT-------EEEEEECC
T ss_pred CCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC-------EEEEEeCC
Confidence 11 1121 222233444 37999999764 68999987
No 261
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=88.85 E-value=22 Score=36.14 Aligned_cols=214 Identities=9% Similarity=-0.033 Sum_probs=119.7
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCC----CceEEec--cCCCCc
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVT----KVWKEIA--PMNFKR 546 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~----~~W~~~~--~~~~~r 546 (824)
+.|..+|..+.+...+- +....-+++++. ++.||+.-.. ...++++|+.+ ..-..+. .+..|
T Consensus 10 ~~I~~i~~~~~~~~~~~----~~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~p- 79 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLI----PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP- 79 (316)
T ss_dssp SSEEEEETTSCCCEEEE----CSCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC-
T ss_pred CeEEEEECCCcceEehh----cCCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCCCc-
Confidence 34677777776655431 112334556655 5789998642 35789999876 2222221 12222
Q ss_pred ceEEEEE--ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec--CCCcccCceEEEE--ECCEEEEEcccCCCCcCCce
Q psy17309 547 CYVSTAV--HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATT--LQGKIYITGGFNGHNCLNSC 620 (824)
Q Consensus 547 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~v 620 (824)
.++++ .++.||+.-. ..+.++++|+....-+.+. .+..| .++++ .++.||+..-. ....+
T Consensus 80 --~glavd~~~~~ly~~d~-----~~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~----~~~~I 145 (316)
T 1ijq_A 80 --DGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKI 145 (316)
T ss_dssp --CEEEEETTTTEEEEEET-----TTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----SSCEE
T ss_pred --CEEEEeecCCeEEEEEC-----CCCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC----CCCeE
Confidence 34444 4789999743 2367899998766544332 23333 23344 37899987521 12578
Q ss_pred EEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCC-CCCCcceEEEEECC
Q psy17309 621 EVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM-YNPRSNFAIEVIDD 697 (824)
Q Consensus 621 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~ 697 (824)
++++++...-+.+..... ..-.+.+.- +++||+.-.. ...|+++|+....-+.+... .....-.++++.++
T Consensus 146 ~~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~ 219 (316)
T 1ijq_A 146 KKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 219 (316)
T ss_dssp EEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT
T ss_pred EEEcCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECC
Confidence 999987554433322111 112233433 6899998653 36899999875433333211 11223356677789
Q ss_pred EEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 698 MIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 698 ~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
.||+.--.+ ..|.++|+.+.+
T Consensus 220 ~ly~~d~~~-----~~V~~~~~~~g~ 240 (316)
T 1ijq_A 220 KVFWTDIIN-----EAIFSANRLTGS 240 (316)
T ss_dssp EEEEEETTT-----TEEEEEETTTCC
T ss_pred EEEEEECCC-----CeEEEEeCCCCc
Confidence 999986322 378999986654
No 262
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=88.85 E-value=22 Score=36.13 Aligned_cols=199 Identities=11% Similarity=0.041 Sum_probs=108.3
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCC----CcEEee-c-CCCcccCc
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTE----NQWSLI-A-PMNVERSD 595 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t----~~W~~~-~-~~p~~r~~ 595 (824)
+.+.++|+.+.....+.+ ....-++++.. ++.||+.... ...++++++.+ ..-+.+ . .+..+
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~p--- 79 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP--- 79 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCCCc---
Confidence 568889998877665432 22233455554 5799998642 36789999876 222222 1 22222
Q ss_pred eEEEE--ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC--CCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEE
Q psy17309 596 ASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEK 669 (824)
Q Consensus 596 ~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~ 669 (824)
.++++ .++.||+.-.. .+.++++|+....-..+. .+..| .+.++. ++.||+..-.. ...|++
T Consensus 80 ~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~----~~~I~~ 147 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT----PAKIKK 147 (316)
T ss_dssp CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS----SCEEEE
T ss_pred CEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC----CCeEEE
Confidence 34444 47899997432 357889998765433332 22222 233333 68899886321 257999
Q ss_pred EeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEeccCCC-CCccceeEEEEcCcc
Q psy17309 670 YNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN-IYRSALSACVIMGLP 746 (824)
Q Consensus 670 yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~~ 746 (824)
+++....-+.+.... -..-.+++.- +++||+.-.. .+.|+++|++...-+.+...+ ....-.+.++.++.+
T Consensus 148 ~~~dG~~~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~l 221 (316)
T 1ijq_A 148 GGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 221 (316)
T ss_dssp EETTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEE
T ss_pred EcCCCCCeEEEEECC-CCCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEE
Confidence 998765443332111 1112234433 6899998543 247899998764333332211 112224556666777
Q ss_pred ceec
Q psy17309 747 NVYD 750 (824)
Q Consensus 747 ~~~~ 750 (824)
|+-.
T Consensus 222 y~~d 225 (316)
T 1ijq_A 222 FWTD 225 (316)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 263
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=88.75 E-value=5.3 Score=37.64 Aligned_cols=142 Identities=10% Similarity=0.091 Sum_probs=78.0
Q ss_pred EEEECCEEEEEecccCCCCCCeEEEEeCCCCc--E-Eee----cCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEE
Q psy17309 551 TAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ--W-SLI----APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVY 623 (824)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W-~~~----~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~y 623 (824)
++..+|.+|+|-| +.+|+++...-. . ..+ +.+|.. -..+....++++|+|-| +..++|
T Consensus 11 ~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~~-iDAa~~~~~g~~yfFkg-------~~yw~~ 75 (196)
T 3c7x_A 11 VAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPAS-INTAYERKDGKFVFFKG-------DKHWVF 75 (196)
T ss_dssp EEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCSS-CCEEEECTTSCEEEEET-------TEEEEE
T ss_pred EEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCCC-ccEEEEeCCCcEEEecC-------CEEEEE
Confidence 4467899999988 568888643200 0 111 234542 22222123788999977 456788
Q ss_pred eCCCCe---EEEcC----CCCCCCcceEEEE-ECCEEEEEecCCCCCccceEEEEeCCCCCEE-----EC---CCCCCCC
Q psy17309 624 DPECNQ---WTLIE----PMRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWS-----QV---PDMYNPR 687 (824)
Q Consensus 624 d~~~~~---W~~~~----~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~---~~~p~~r 687 (824)
+..+.. =..+. .+|.....++... .++++|++-| +..++||..+++-. .+ +.+| .
T Consensus 76 ~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip--~ 146 (196)
T 3c7x_A 76 DEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIP--E 146 (196)
T ss_dssp ETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCC--S
T ss_pred eCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcC--C
Confidence 753211 11222 2443223322222 2699999988 57899998764311 11 1222 2
Q ss_pred cceEEEEE-CC-EEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 688 SNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 688 ~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
.--++... ++ ++|++=|. ..|.||..+.+
T Consensus 147 ~idaAf~~~~~~~~YfFkg~-------~y~r~d~~~~~ 177 (196)
T 3c7x_A 147 SPRGSFMGSDEVFTYFYKGN-------KYWKFNNQKLK 177 (196)
T ss_dssp SCSEEEECTTSSEEEEEETT-------EEEEEETTTTE
T ss_pred CcceeEEecCCCEEEEEECC-------EEEEEECCcce
Confidence 22333333 44 99999663 68999987754
No 264
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=88.73 E-value=0.18 Score=47.36 Aligned_cols=51 Identities=20% Similarity=0.174 Sum_probs=44.0
Q ss_pred eecccchhhhheeecccceecCHh-hHHHHHHHHhhcChHhHHHHHHHHHhh
Q psy17309 252 NYTENQDKIEEKKLFERKLHITED-NVASLLLATDFFCMSKAQDLCCDFIKR 302 (824)
Q Consensus 252 ~~~~~~~~~ll~~~Yt~~l~l~~~-~v~~ll~~a~~~~i~~l~~~c~~~l~~ 302 (824)
|=++..|+.||+|+-+|++.+..+ ....++.-|.+|+|+.|++.|.+.|.+
T Consensus 61 DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 61 DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 668999999999999999988665 347899999999999999999987754
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=88.61 E-value=26 Score=36.77 Aligned_cols=212 Identities=12% Similarity=0.020 Sum_probs=119.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 552 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 552 (824)
..+..+++.......+.. ......+++.. ++.||+.-- ....++++++.......+........ .+++
T Consensus 96 ~~I~~i~~~~~~~~~~~~----~~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p-~gla 165 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP-GGLA 165 (386)
T ss_dssp SCEEEECTTSCCCEEEEC----SCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECSSCSCC-CCEE
T ss_pred ccceeeccCCCcEEEEec----CCCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCCCCc-cEEE
Confidence 356777777665544311 12234455554 688998753 23579999998877655432221111 2233
Q ss_pred E--ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec--CCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCC
Q psy17309 553 V--HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPE 626 (824)
Q Consensus 553 ~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~ 626 (824)
+ .++.||+.-.. .+.++++++....-+.+. .+..| .++++- ++.||+.--.. ...++++++.
T Consensus 166 vd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~d 233 (386)
T 3v65_B 166 VDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMD 233 (386)
T ss_dssp EETTTTEEEEEETT-----TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred EEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCC
Confidence 3 37899998542 357888888765433332 22222 233333 68999874211 3679999987
Q ss_pred CCeEEEcCCCCCCCcceEEEE--ECCEEEEEecCCCCCccceEEEEeCCCCCEEEC-C-CCCCCCcceEEEEECCEEEEE
Q psy17309 627 CNQWTLIEPMRHRRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-P-DMYNPRSNFAIEVIDDMIFAI 702 (824)
Q Consensus 627 ~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~~p~~r~~~~~~~~~~~i~v~ 702 (824)
...-+.+..-.. ..-.+.+. .+++||+.-.. ...|+++|+....-+.+ . .++ .-.++++.++.||+.
T Consensus 234 G~~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~---~P~giav~~~~ly~t 304 (386)
T 3v65_B 234 GSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQGLP---HPFAITVFEDSLYWT 304 (386)
T ss_dssp SCSCEEEECSSC-SCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEECSSCS---SEEEEEEETTEEEEE
T ss_pred CCCcEEEEECCC-CCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEECCCC---CceEEEEECCEEEEe
Confidence 654333321111 11123333 36899998643 36899999875432222 2 222 235666689999998
Q ss_pred ccCCCCceeeEEEEEECCCC
Q psy17309 703 GGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~ 722 (824)
.-.+ ..|.++|..+.
T Consensus 305 d~~~-----~~V~~~~~~~G 319 (386)
T 3v65_B 305 DWHT-----KSINSANKFTG 319 (386)
T ss_dssp ETTT-----TEEEEEETTTC
T ss_pred eCCC-----CeEEEEECCCC
Confidence 5322 36888985444
No 266
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=88.47 E-value=36 Score=38.25 Aligned_cols=187 Identities=15% Similarity=0.110 Sum_probs=99.3
Q ss_pred EEEEeecCCCcccceEEEEECCCCceEEeccCCCCcce-EEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeec-
Q psy17309 511 IYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA- 587 (824)
Q Consensus 511 lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~- 587 (824)
.++.|+.+ ..+..||..+.+.. ..+...... .+++.. ++.+++.||.+ ..+..+|..+.+-...-
T Consensus 162 ~l~s~s~D-----~~v~lwd~~~~~~~--~~l~~H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~~ 229 (611)
T 1nr0_A 162 RIISGSDD-----NTVAIFEGPPFKFK--STFGEHTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVFE 229 (611)
T ss_dssp EEEEEETT-----SCEEEEETTTBEEE--EEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEECB
T ss_pred EEEEEeCC-----CeEEEEECCCCeEe--eeeccccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeeec
Confidence 45666654 34777887654432 222222221 222222 67788888754 45888888776643221
Q ss_pred CC-----CcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCC-CcceEEEEECCEEEEEecCCC
Q psy17309 588 PM-----NVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR-RSGVSCIAYHECIYVIGGFNG 660 (824)
Q Consensus 588 ~~-----p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~ 660 (824)
.. .....-.+++.. +++.++.||.+ ..+..||..+.+....-+.... ......+..++..++.++.+
T Consensus 230 ~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d- 303 (611)
T 1nr0_A 230 DDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN- 303 (611)
T ss_dssp CTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT-
T ss_pred cccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC-
Confidence 10 111111122222 67777788765 4688999988776443222211 11222334466666666654
Q ss_pred CCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEe
Q psy17309 661 MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 661 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
..+..+|+.+.+-... +.........+.+ +++.++.|+.++ .+.+||..+..-..
T Consensus 304 ----~~i~~~~~~~~~~~~~--~~gh~~~v~~l~~spdg~~l~s~s~D~-----~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 304 ----GFINFVNPELGSIDQV--RYGHNKAITALSSSADGKTLFSADAEG-----HINSWDISTGISNR 360 (611)
T ss_dssp ----CCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEE
T ss_pred ----CcEEEEeCCCCCcceE--EcCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEECCCCceee
Confidence 3567788776542221 1111111222333 677888888765 57889988776544
No 267
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=88.42 E-value=6.4 Score=44.97 Aligned_cols=195 Identities=8% Similarity=-0.036 Sum_probs=103.8
Q ss_pred ceEEEEECC--C-CceEEeccCCC---CcceEEEEE-ECCEEEEEecccCC-----CCCCeEEEEeCCC------CcEEe
Q psy17309 524 NSCRCFNAV--T-KVWKEIAPMNF---KRCYVSTAV-HQDVIYAMGGYNGQ-----RRQNSVEKYNYTE------NQWSL 585 (824)
Q Consensus 524 ~~~~~yd~~--~-~~W~~~~~~~~---~r~~~~~~~-~~~~iyv~GG~~~~-----~~~~~~~~yd~~t------~~W~~ 585 (824)
..+|.+|.. + +.-..+...+. .......+. -+|+.++++..+.. .....++++|..+ ...+.
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 568999987 4 66666665431 111122222 35654444443210 2235789999988 66555
Q ss_pred ec-CCCcccCceEEEEECCEEEEEcccCCCC---cCCceEEEeCC-CC---eEEEcCCCCCCCcceEEEEE-CCEEEEEe
Q psy17309 586 IA-PMNVERSDASATTLQGKIYITGGFNGHN---CLNSCEVYDPE-CN---QWTLIEPMRHRRSGVSCIAY-HECIYVIG 656 (824)
Q Consensus 586 ~~-~~p~~r~~~~~~~~~~~lyv~GG~~~~~---~~~~v~~yd~~-~~---~W~~~~~~p~~r~~~~~~~~-~~~iyv~G 656 (824)
+. .-+. ........-+|+..++...+... ....++.+|.. ++ ....+..-.. ......+.. +|++|+.+
T Consensus 182 l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~-~~~~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 182 LSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE-EAIAQAEWAPDGSLIVAT 259 (662)
T ss_dssp SSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT-BCEEEEEECTTSCEEEEE
T ss_pred EEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC-ceEcceEECCCCeEEEEE
Confidence 54 2221 11111122256544444433211 12579999998 56 3443322111 111222222 67888776
Q ss_pred cCCCCCccceEEEEeCCCCCEEECCCCCCCC----c---ceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCcEEec
Q psy17309 657 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR----S---NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 657 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r----~---~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
..++ ...++.+|+.+.+++.+....... . ...++.. ++++++.+.. + ...++.+|.++...+.+
T Consensus 260 ~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 260 DRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G---AAVLGILDPESGELVDA 331 (662)
T ss_dssp CTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S---SCEEEEEETTTTEEEEC
T ss_pred CCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C---ccEEEEEECCCCcEEEe
Confidence 6432 347999999889998875432111 1 1123333 6788877754 2 24788889988877766
No 268
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=88.41 E-value=9.6 Score=42.69 Aligned_cols=188 Identities=10% Similarity=-0.013 Sum_probs=97.7
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCC--CCcEE
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYT--ENQWS 584 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~--t~~W~ 584 (824)
+.+||... ..+.+..+|+.+++-.. .++....-|.++.. +..+|+.+. ...+..||+. +.+
T Consensus 167 ~~~~V~~~-----~~~~V~viD~~t~~v~~--~i~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~-- 231 (567)
T 1qks_A 167 NLFSVTLR-----DAGQIALIDGSTYEIKT--VLDTGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPT-- 231 (567)
T ss_dssp GEEEEEET-----TTTEEEEEETTTCCEEE--EEECSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCC--
T ss_pred ceEEEEeC-----CCCeEEEEECCCCeEEE--EEeCCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCc--
Confidence 46666653 23679999999876432 22233333444443 346777542 2579999995 443
Q ss_pred eecCCCcccCceEEEEE-----CC-EEEEEcccCCCCcCCceEEEeCCCCeEEEc-C--CC--------CCCCcceEEEE
Q psy17309 585 LIAPMNVERSDASATTL-----QG-KIYITGGFNGHNCLNSCEVYDPECNQWTLI-E--PM--------RHRRSGVSCIA 647 (824)
Q Consensus 585 ~~~~~p~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~--~~--------p~~r~~~~~~~ 647 (824)
.+..++....-..++.. +| .+|+..-. .+.+.++|..+.+=... + .+ |.+|.....+.
T Consensus 232 ~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s 306 (567)
T 1qks_A 232 TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 306 (567)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred EeEEEecCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc
Confidence 33333333222344444 44 56665432 25678889777553222 1 11 12333322222
Q ss_pred ECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 648 YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 648 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
.++..+++-= .....++..|........+..++..+.-|....- +++.+++.-. ..+.+.++|.++++=
T Consensus 307 ~~~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~----~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 307 HYRPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN----ARNKLVVIDTKEGKL 376 (567)
T ss_dssp SSSSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG----GGTEEEEEETTTTEE
T ss_pred CCCCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC----CCCeEEEEECCCCcE
Confidence 3334444321 1135788888877665555444455555544332 4444333221 234788899988753
No 269
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=88.38 E-value=0.82 Score=38.46 Aligned_cols=85 Identities=8% Similarity=0.053 Sum_probs=54.5
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHHHHHhh
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 302 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~ 302 (824)
...+.+|+.++.+.+.+|.........-.. ..+.+..-+. ...+...+|+-.
T Consensus 21 ~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~---------------~~i~l~~~~~-------------~~f~~~l~~iYt 72 (109)
T 2vkp_A 21 TRTVPAHKYVLAVGSSVFYAMFYGDLAEVK---------------SEIHIPDVEP-------------AAFLILLKYMYS 72 (109)
T ss_dssp CEEEEECHHHHHHHCHHHHHHHC------C---------------CEEEETTSCH-------------HHHHHHHHHHHH
T ss_pred cEEEEeeHHHHHHcCHHHHHHhcCCcccCC---------------CeEEeCCCCH-------------HHHHHHHHHHcC
Confidence 357888888888888888654332211100 2333322111 122233344533
Q ss_pred ---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy17309 303 ---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 335 (824)
Q Consensus 303 ---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~ 335 (824)
.++.+|+..++.+|+.++++.|.+.|.+|+.++
T Consensus 73 ~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 73 DEIDLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 477899999999999999999999999999876
No 270
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=88.23 E-value=6 Score=42.72 Aligned_cols=142 Identities=15% Similarity=0.088 Sum_probs=81.3
Q ss_pred EEEEECCEEEEEeecCCCcccceEEEEECCCCceEE--ec----cCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEE
Q psy17309 503 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE--IA----PMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVE 574 (824)
Q Consensus 503 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~--~~----~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 574 (824)
+++..++.+|+|-| +.+|+++.....+.. +. .+|.. .. ++... ++++|+|-| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------CEEE
Confidence 55567999999988 557777765444332 11 22321 12 22222 689999988 5788
Q ss_pred EEeCCCCc--E-Eeec---CCCcccCceEEEE-E--CCEEEEEcccCCCCcCCceEEEeCCCCeEE-----Ec----CCC
Q psy17309 575 KYNYTENQ--W-SLIA---PMNVERSDASATT-L--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LI----EPM 636 (824)
Q Consensus 575 ~yd~~t~~--W-~~~~---~~p~~r~~~~~~~-~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~----~~~ 636 (824)
+|+..+-. + ..+. .+|......-+|. . ++++|+|-| +..++||..+.+-. .+ +.+
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCC
Confidence 88743210 0 1111 1222112222332 2 689999977 56889987654322 11 122
Q ss_pred CCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC
Q psy17309 637 RHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 637 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 676 (824)
|. .--++...++++|.|-| +..++||..+.+
T Consensus 404 p~--~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~ 434 (450)
T 1su3_A 404 GH--KVDAVFMKDGFFYFFHG-------TRQYKFDPKTKR 434 (450)
T ss_dssp CS--CCSEEEEETTEEEEEET-------TEEEEEETTTTE
T ss_pred CC--CccEEEEcCCeEEEEeC-------CEEEEEECCcce
Confidence 22 22344456899999988 578999987654
No 271
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=88.19 E-value=9.8 Score=38.41 Aligned_cols=195 Identities=10% Similarity=-0.005 Sum_probs=98.3
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 586 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 586 (824)
++.||+.+-. ...+++|++ ++....+... .. ...+++.- +|++|+.... ...+.+||+. .+.+.+
T Consensus 56 g~~l~~~d~~-----~~~i~~~~~-~g~~~~~~~~-~~-~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 56 QRTLVWSDLV-----GRRVLGWRE-DGTVDVLLDA-TA-FTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLL 121 (305)
T ss_dssp GTEEEEEETT-----TTEEEEEET-TSCEEEEEES-CS-CEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCEEEEEECC-----CCEEEEEeC-CCCEEEEeCC-CC-ccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEE
Confidence 3457776532 256888998 4544443321 11 12233332 6788876421 2468899986 666655
Q ss_pred cCCCc-cc--CceEEEE-ECCEEEEE----cccCC--------CCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-C
Q psy17309 587 APMNV-ER--SDASATT-LQGKIYIT----GGFNG--------HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-H 649 (824)
Q Consensus 587 ~~~p~-~r--~~~~~~~-~~~~lyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~ 649 (824)
..... .+ .-..+++ -+|.||+. |-... ......+++||+.+++++.+. ... ...+.+.. +
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~-~p~gl~~spd 198 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD-HPNGLAFSPD 198 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES-SEEEEEECTT
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC-CCcceEEcCC
Confidence 33211 11 1112332 37889985 32210 011357899999888877664 111 11223333 4
Q ss_pred C-EEEEEecCCCCCccceEEEEeCCCCCEEE---CCCCCCCCcceEEEE-ECCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 650 E-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQ---VPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 650 ~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~---~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
+ .||+............+++||...+.... ....+.. .-.+++. -+++||+..+ ..+.+||++...-
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~-~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG-LPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLL 270 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS-CCCSEEECTTSCEEECCS-------SEEEEECTTSCEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC-CCCeEEECCCCCEEEecC-------CcEEEECCCCCEE
Confidence 4 48877542211112578899887543221 1111111 1112222 3677777652 2489999976655
Q ss_pred Eec
Q psy17309 725 YEA 727 (824)
Q Consensus 725 ~~~ 727 (824)
..+
T Consensus 271 ~~~ 273 (305)
T 3dr2_A 271 GHI 273 (305)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 272
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.08 E-value=12 Score=37.90 Aligned_cols=176 Identities=16% Similarity=0.229 Sum_probs=90.2
Q ss_pred ECCEEEEEeecCCCcccceEEEEECC-CCceEEeccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCC-cE
Q psy17309 507 IGYNIYVIGGFDGNEYYNSCRCFNAV-TKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTEN-QW 583 (824)
Q Consensus 507 ~~~~lyv~GG~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~-~W 583 (824)
.++.||+... ...+++||+. ...|......+. ..+.+.. ++.||+... ...+++||+... .|
T Consensus 106 ~~~~l~v~t~------~~~l~~~d~~g~~~~~~~~~~~~---~~~~~~~~~g~l~vgt~------~~~l~~~d~~g~~~~ 170 (330)
T 3hxj_A 106 FEDILYVTSM------DGHLYAINTDGTEKWRFKTKKAI---YATPIVSEDGTIYVGSN------DNYLYAINPDGTEKW 170 (330)
T ss_dssp ETTEEEEECT------TSEEEEECTTSCEEEEEECSSCC---CSCCEECTTSCEEEECT------TSEEEEECTTSCEEE
T ss_pred ECCEEEEEec------CCEEEEEcCCCCEEEEEcCCCce---eeeeEEcCCCEEEEEcC------CCEEEEECCCCCEeE
Confidence 3888887532 2468999988 334665432221 1122333 677777431 256899998832 36
Q ss_pred EeecCCCcccCceEEEE-ECCEEEEEcccCCCCcCCceEEEeCCC-CeEEEcCCCCCCCcceEEEEE-CCEEEEEecCCC
Q psy17309 584 SLIAPMNVERSDASATT-LQGKIYITGGFNGHNCLNSCEVYDPEC-NQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNG 660 (824)
Q Consensus 584 ~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 660 (824)
+...+ ..... +.+. -++.||+.. ..+.+||... ..|+..... .. ..+.+.. ++.||+...
T Consensus 171 ~~~~~--~~~~~-~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~--~~-~~~~~~~~~g~l~v~t~--- 233 (330)
T 3hxj_A 171 RFKTN--DAITS-AASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGY--WT-VTRPAISEDGTIYVTSL--- 233 (330)
T ss_dssp EEECS--SCCCS-CCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSS--CC-CSCCEECTTSCEEEEET---
T ss_pred EEecC--CCcee-eeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCC--cc-eeceEECCCCeEEEEcC---
Confidence 54322 22222 2233 367888753 4588898442 347654321 11 1222333 457887542
Q ss_pred CCccceEEEEeCCCCC-EEECCCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCC-cEEe
Q psy17309 661 MSRMCNGEKYNPVTKT-WSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD-EWYE 726 (824)
Q Consensus 661 ~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~-~W~~ 726 (824)
...+.+||+.... |..-..- .... +.+.- ++.||+... ++ .+.+||++.. .|..
T Consensus 234 ---~~gl~~~~~~g~~~~~~~~~~--~~~~-~~~~~~~g~l~v~t~-~g-----gl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 234 ---DGHLYAINPDGTEKWRFKTGK--RIES-SPVIGNTDTIYFGSY-DG-----HLYAINPDGTEKWNF 290 (330)
T ss_dssp ---TTEEEEECTTSCEEEEEECSS--CCCS-CCEECTTSCEEEECT-TC-----EEEEECTTSCEEEEE
T ss_pred ---CCeEEEECCCCCEeEEeeCCC--Cccc-cceEcCCCeEEEecC-CC-----CEEEECCCCcEEEEE
Confidence 1467888875443 5443211 1111 22223 677777532 21 5788887433 4553
No 273
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=88.06 E-value=38 Score=37.99 Aligned_cols=181 Identities=8% Similarity=0.064 Sum_probs=95.4
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEec-cC-----CCCcc
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA-PM-----NFKRC 547 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~-----~~~r~ 547 (824)
..+..||..+.+.... .. .....-.+++.. ++.+++.||.+ ..+..||..+++-...- .. .....
T Consensus 170 ~~v~lwd~~~~~~~~~--l~-~H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~ 241 (611)
T 1nr0_A 170 NTVAIFEGPPFKFKST--FG-EHTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 241 (611)
T ss_dssp SCEEEEETTTBEEEEE--EC-CCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred CeEEEEECCCCeEeee--ec-cccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeeeccccccccccCCC
Confidence 3467778666544321 10 011122233333 67778888765 45888998877643221 10 11111
Q ss_pred eEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcc-cCceEEEEECCEEEEEcccCCCCcCCceEEEeC
Q psy17309 548 YVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE-RSDASATTLQGKIYITGGFNGHNCLNSCEVYDP 625 (824)
Q Consensus 548 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~-r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~ 625 (824)
-.+++.. ++..++.||.+ ..+..+|..+.+....-+.... ......+..++..++.++.+ ..+..+|+
T Consensus 242 V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~i~~~~~ 311 (611)
T 1nr0_A 242 VFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN-----GFINFVNP 311 (611)
T ss_dssp EEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT-----CCEEEEET
T ss_pred EEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC-----CcEEEEeC
Confidence 1223332 67777777754 5688999988776443222111 11222333466666666654 35778888
Q ss_pred CCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEEC
Q psy17309 626 ECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 680 (824)
Q Consensus 626 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 680 (824)
.+..-... +........++.+ +++.++.|+.+ ..+..+|..+..-...
T Consensus 312 ~~~~~~~~--~~gh~~~v~~l~~spdg~~l~s~s~D-----~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 312 ELGSIDQV--RYGHNKAITALSSSADGKTLFSADAE-----GHINSWDISTGISNRV 361 (611)
T ss_dssp TTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEC
T ss_pred CCCCcceE--EcCCCCCEEEEEEeCCCCEEEEEeCC-----CcEEEEECCCCceeee
Confidence 77653222 1111222223333 67777777764 4678899887765543
No 274
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.05 E-value=8.6 Score=43.36 Aligned_cols=119 Identities=12% Similarity=0.114 Sum_probs=69.5
Q ss_pred EEEECCEEEEEecccCCCCCCeEEEEeC-CCCc--EEeecCCCc-----cc---CceEEEE--ECCE----EEEEcccCC
Q psy17309 551 TAVHQDVIYAMGGYNGQRRQNSVEKYNY-TENQ--WSLIAPMNV-----ER---SDASATT--LQGK----IYITGGFNG 613 (824)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~-~t~~--W~~~~~~p~-----~r---~~~~~~~--~~~~----lyv~GG~~~ 613 (824)
-++.++.||+.+.. ...++.+|. .+.+ |+.-...+. .+ ...+.++ .+++ ||+...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--- 129 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL--- 129 (599)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---
Confidence 35679999998652 246899999 7764 887543321 11 1123444 5676 887532
Q ss_pred CCcCCceEEEeCCCCe--EEEcCCCCCC--CcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC--EEEC
Q psy17309 614 HNCLNSCEVYDPECNQ--WTLIEPMRHR--RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 680 (824)
Q Consensus 614 ~~~~~~v~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 680 (824)
...+..+|.+|++ |+.-..-+.. ....+-++.+++||+-.+..+......+..||.++.+ |+.-
T Consensus 130 ---dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 ---DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred ---CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 2468999988775 8754221100 1112234568888765432111123578999998765 8754
No 275
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=87.92 E-value=19 Score=37.21 Aligned_cols=127 Identities=16% Similarity=0.201 Sum_probs=78.4
Q ss_pred CCCCceE--EeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEE-EeC-----CCCcE-EeecC-CCcccCceEEEE
Q psy17309 531 AVTKVWK--EIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEK-YNY-----TENQW-SLIAP-MNVERSDASATT 600 (824)
Q Consensus 531 ~~~~~W~--~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-yd~-----~t~~W-~~~~~-~p~~r~~~~~~~ 600 (824)
.....|+ +++..|..-.-|+.|.+++.=|++|=.+++.....+=. |-+ ....- +.++. ....-+-.++-.
T Consensus 267 F~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvky 346 (670)
T 3ju4_A 267 FHKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKY 346 (670)
T ss_dssp STTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEE
T ss_pred eccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhh
Confidence 3456676 45666766777999999998899986666554444322 211 11111 22322 222233445556
Q ss_pred ECCEEEEEc-ccCCCCcCCceEEEeCCCCeEEEcC-CCCCCCcceEEEEECCEEEEEec
Q psy17309 601 LQGKIYITG-GFNGHNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAYHECIYVIGG 657 (824)
Q Consensus 601 ~~~~lyv~G-G~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG 657 (824)
++|.||++- |..+...-..+.+-+.....|+.+. |-.........+.+++.||+||-
T Consensus 347 YdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 347 YDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp ETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred hCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 799999885 4444344567778877788899885 22223344456788999999996
No 276
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=87.89 E-value=18 Score=36.84 Aligned_cols=186 Identities=12% Similarity=-0.005 Sum_probs=95.7
Q ss_pred ccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE
Q psy17309 522 YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 601 (824)
Q Consensus 522 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~ 601 (824)
....++.+|..+++-..+ .........-+|+..++...........++.+|..+.+...+...+. ....+..
T Consensus 41 ~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~ws 112 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN---IRSLEWN 112 (347)
T ss_dssp EEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE---EEEEEEC
T ss_pred ccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC---ccceeEC
Confidence 456799999998876655 11111122225544444433221123468999998888776654443 2222222
Q ss_pred -CCEEEEEcccC------------------CC----CcCCceEEEeCCCCeE-EEcCCCCCCCcceEEEEECCEEEEEec
Q psy17309 602 -QGKIYITGGFN------------------GH----NCLNSCEVYDPECNQW-TLIEPMRHRRSGVSCIAYHECIYVIGG 657 (824)
Q Consensus 602 -~~~lyv~GG~~------------------~~----~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~~~~iyv~GG 657 (824)
+++.+++...+ +. .....++.+|+.+++. ..+.. + .....+...+.+++.+.
T Consensus 113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~ 188 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVP 188 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEE
T ss_pred CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEe
Confidence 55433443321 00 1135688999998887 55554 3 22233333333655554
Q ss_pred CCCCC---c-cceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCC---ceeeEEEEEECCCCcEEec
Q psy17309 658 FNGMS---R-MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGV---TTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 658 ~~~~~---~-~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~---~~~~~v~~yd~~~~~W~~~ 727 (824)
..... . ...++.+| +.+++.+..- .......-+++.+++++.... .....++++| +.++..+
T Consensus 189 ~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 189 HREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp CCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred cccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 33221 1 45788888 6666665431 112222446654444433221 1235789998 6667665
No 277
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=87.63 E-value=0.31 Score=51.72 Aligned_cols=141 Identities=14% Similarity=0.108 Sum_probs=57.9
Q ss_pred ECCEEEEEeecCCCcccceEEEEECCCCc--eEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCC--c
Q psy17309 507 IGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTEN--Q 582 (824)
Q Consensus 507 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~--~ 582 (824)
.++.||+.+. + ..++++|..+++ |+.-. .. ...+.+..++.+|+.|+.+ ..++.+|..+. .
T Consensus 8 ~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~~--~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 8 PETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--DP--VLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNEGL 72 (369)
T ss_dssp CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--CC--SCCCC-----CCEEECTTT-----CCEEEC-----CCS
T ss_pred eCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--CC--ceecceEcCCCEEEEeCCC-----CEEEEEECCCCcee
Confidence 3666666542 2 469999998876 77543 11 1112234567788876533 45889998654 4
Q ss_pred EEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCe--EEEcCCCCCCCcceEEEEECCEEEEEecCCC
Q psy17309 583 WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHECIYVIGGFNG 660 (824)
Q Consensus 583 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 660 (824)
|+.-...+.......+...++.||+ |+.+ ..+..+|+.+++ |+.-..-. ...+..++.||+. +.
T Consensus 73 w~~~~~~~~~~~~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v~~~-~~-- 138 (369)
T 2hz6_A 73 TKLPFTIPELVQASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLLYLG-RT-- 138 (369)
T ss_dssp EECSCCHHHHHTTCSCC-----CCC-CEEE-----EEEEEECCC---------------------------EEEE-EE--
T ss_pred eeeeccCccccccCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCCc-----ccccccCCEEEEE-ec--
Confidence 7643222111111111113555554 4322 468889988764 65432111 0112244555554 32
Q ss_pred CCccceEEEEeCCCCC--EEE
Q psy17309 661 MSRMCNGEKYNPVTKT--WSQ 679 (824)
Q Consensus 661 ~~~~~~v~~yd~~~~~--W~~ 679 (824)
...+..+|+.+.+ |+.
T Consensus 139 ---dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 139 ---EYTITMYDTKTRELRWNA 156 (369)
T ss_dssp ---EEEEECCCSSSSSCCCEE
T ss_pred ---CCEEEEEECCCCCEEEeE
Confidence 2467888887654 764
No 278
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=87.32 E-value=32 Score=36.32 Aligned_cols=149 Identities=7% Similarity=-0.043 Sum_probs=77.6
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCC-CCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
++.+++.|+.+ ..+..||..+.+-...-..+ ....-.+++.. ++..++.|+.+ ..+.+||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEEE
Confidence 35667777654 46889999886643221111 11122222222 56777777754 458899998865432
Q ss_pred ecCCCcccCceEEEEE-----CCEEEEEcccCCCCcCCceEEEeCCCCeEEEc-C-C---C------C------------
Q psy17309 586 IAPMNVERSDASATTL-----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-E-P---M------R------------ 637 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~---~------p------------ 637 (824)
.-.++....-.+++.. ++.+++.|+.+ ..+..||..+.+-... . . . |
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 2111211111111111 35566666644 3678888876652211 0 0 0 0
Q ss_pred --CCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCC
Q psy17309 638 --HRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 638 --~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 676 (824)
....-.+++..++.+++.||.+ ..+.+||..+.+
T Consensus 326 ~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 326 IRSLNALSTISVSNDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp CCSGGGGCCEEEETTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred cccCCceEEEEECCceEEEecCCC-----CeEEEEECCCcc
Confidence 0011122334478888888864 467888887654
No 279
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.73 E-value=0.57 Score=39.33 Aligned_cols=37 Identities=8% Similarity=-0.025 Sum_probs=33.6
Q ss_pred ceecCHhhHHHHHHHHhhcChHhHHHHHHHHHhhcCC
Q psy17309 269 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTT 305 (824)
Q Consensus 269 ~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~~l~ 305 (824)
.-.++.+|+..++..|+.|.+++|.+.|.+|+.+++.
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~ 41 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLA 41 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCH
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4468899999999999999999999999999988764
No 280
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=86.72 E-value=32 Score=35.71 Aligned_cols=178 Identities=11% Similarity=0.137 Sum_probs=89.7
Q ss_pred ceEEEEECCCCcEEEcccCCCCCC--CceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCC--ceEEeccCCCCcce
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGP--RAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTK--VWKEIAPMNFKRCY 548 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~--r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~ 548 (824)
..+..||..+.+-...-....+.. ..-.++... ++.+++.|+.+ ..+..||.... .-..+..-.. . -
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~~~~~~~~~h~~-~-v 252 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITSRAVRTYHGHEG-D-I 252 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTCCCCEEECCCSS-C-C
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCCcceEEECCcCC-C-e
Confidence 457788888776544211121111 111222221 56788888865 35888897632 1222211111 1 1
Q ss_pred EEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee-cCCCc----ccC-ceEEEE-ECCEEEEEcccCCCCcCCce
Q psy17309 549 VSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNV----ERS-DASATT-LQGKIYITGGFNGHNCLNSC 620 (824)
Q Consensus 549 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~-~~~p~----~r~-~~~~~~-~~~~lyv~GG~~~~~~~~~v 620 (824)
.+++.. ++..++.|+.+ ..+..||..+..-... ...+. ... -.+++. .++++++.|+.+ ..+
T Consensus 253 ~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----g~i 322 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-----GDC 322 (380)
T ss_dssp CEEEECTTSSEEEEECSS-----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----SCE
T ss_pred EEEEEecCCCeEEEEcCC-----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----CCE
Confidence 122222 56777777754 4578889887654322 11111 111 112222 267777777654 468
Q ss_pred EEEeCCCCeEE-EcCCCCCC---CcceEEEEECCEEEEEecCCCCCccceEEEEeCCC
Q psy17309 621 EVYDPECNQWT-LIEPMRHR---RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVT 674 (824)
Q Consensus 621 ~~yd~~~~~W~-~~~~~p~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 674 (824)
..||..+.+-. .+..+... +....+..-++..++.||.+ ..+.++|...
T Consensus 323 ~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D-----~~i~iW~~~~ 375 (380)
T 3iz6_a 323 YVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD-----KNLKIWAFSG 375 (380)
T ss_dssp EEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT-----SCEEEEECCS
T ss_pred EEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC-----CCEEEEecCC
Confidence 89998776543 22222221 11111222367888888865 3566676654
No 281
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=86.70 E-value=23 Score=33.89 Aligned_cols=146 Identities=12% Similarity=0.074 Sum_probs=79.7
Q ss_pred eEEEEECCEEEEEeecCCCcccceEEEEECCCCc-eE--Eec----cCCCCcceEEEEE-ECCEEEEEecccCCCCCCeE
Q psy17309 502 HGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV-WK--EIA----PMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSV 573 (824)
Q Consensus 502 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W~--~~~----~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 573 (824)
-++...++.+|+|=| +.+|+++..... .. .+. .+|. ...++... .++++|+|-| +..
T Consensus 34 DAi~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG-------~~y 98 (218)
T 1gen_A 34 DGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NEY 98 (218)
T ss_dssp SEEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------TEE
T ss_pred eEEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------CEE
Confidence 345556899999988 567777655422 11 121 2232 22222222 2689999988 678
Q ss_pred EEEeCCCCc--E-EeecC--CCcccCceEEEEE---CCEEEEEcccCCCCcCCceEEEeCCCCeEEE-----cC-C-CCC
Q psy17309 574 EKYNYTENQ--W-SLIAP--MNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----IE-P-MRH 638 (824)
Q Consensus 574 ~~yd~~t~~--W-~~~~~--~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~~-~-~p~ 638 (824)
|+||..+.. + +.+.. +|.......+|.. ++++|+|-| +..++||..+++-.. +. . +..
T Consensus 99 W~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~ 171 (218)
T 1gen_A 99 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAI 171 (218)
T ss_dssp EEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSC
T ss_pred EEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCC
Confidence 999853110 0 11111 2221112233332 689999977 568899987764221 11 0 111
Q ss_pred CCcceEEEEEC--CEEEEEecCCCCCccceEEEEeCCCCC
Q psy17309 639 RRSGVSCIAYH--ECIYVIGGFNGMSRMCNGEKYNPVTKT 676 (824)
Q Consensus 639 ~r~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~~~~ 676 (824)
+..-.++...+ +.+|.+-| +..++||..+..
T Consensus 172 p~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 172 PDNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp CSSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 22223444444 89999988 577888876443
No 282
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=86.16 E-value=10 Score=40.60 Aligned_cols=146 Identities=8% Similarity=0.066 Sum_probs=71.8
Q ss_pred CEEEEEecccCCCCCCeEEEEeCCCC--------cEEeecCCCc-ccCceEEEEE-CCE-EEEEcccCCCCcCCceEEEe
Q psy17309 556 DVIYAMGGYNGQRRQNSVEKYNYTEN--------QWSLIAPMNV-ERSDASATTL-QGK-IYITGGFNGHNCLNSCEVYD 624 (824)
Q Consensus 556 ~~iyv~GG~~~~~~~~~~~~yd~~t~--------~W~~~~~~p~-~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~v~~yd 624 (824)
+.+++.|+.+ ..+.+||..+. ....+..+.. .....+++.. ++. +++.|+.+ ..+..||
T Consensus 141 ~~~lat~~~d-----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd 210 (430)
T 2xyi_A 141 ACVIATKTPS-----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD-----HTICLWD 210 (430)
T ss_dssp EEEEEEECSS-----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT-----SCEEEEE
T ss_pred CcEEEEECCC-----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC-----CeEEEEe
Confidence 4677777643 35888887652 1221111111 1112223332 334 67777655 4688888
Q ss_pred CCCC---eEEE--cCCCCCCCc-ceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCC-EEECCCCCCCCcceEEEEE
Q psy17309 625 PECN---QWTL--IEPMRHRRS-GVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKT-WSQVPDMYNPRSNFAIEVI 695 (824)
Q Consensus 625 ~~~~---~W~~--~~~~p~~r~-~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~ 695 (824)
..+. .+.. ...+..... -..++.. ++.+++.|+.+ ..+.+||+.+.. ...+..+........++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 285 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF 285 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence 8762 1221 111111111 2222322 56677777653 578899987652 1111111111122223333
Q ss_pred ---CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 696 ---DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 696 ---~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
+..+++.|+.++ .+.+||..+
T Consensus 286 ~p~~~~~l~tg~~dg-----~v~vwd~~~ 309 (430)
T 2xyi_A 286 NPYSEFILATGSADK-----TVALWDLRN 309 (430)
T ss_dssp CSSCTTEEEEEETTS-----EEEEEETTC
T ss_pred CCCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 334888888765 588888876
No 283
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=86.07 E-value=0.22 Score=42.30 Aligned_cols=63 Identities=19% Similarity=0.150 Sum_probs=42.7
Q ss_pred eeecceEEEE---cccccccccceeEEeeecccchhhhheeecccc-----------eecCHhhHHHHHHHHhhcCh
Q psy17309 227 AVHQDVIYAM---GGYNGQRRQNSVEKYNYTENQDKIEEKKLFERK-----------LHITEDNVASLLLATDFFCM 289 (824)
Q Consensus 227 ~~~~~~~~~~---~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~-----------l~l~~~~v~~ll~~a~~~~i 289 (824)
+..+..+..| .|.+.+.....|.+++++..+++.+++|++.-. -.+..+++.+|+.||++|+|
T Consensus 36 A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 36 ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHhCc
Confidence 3444444444 134455556789999999999999999986533 25788899999999999875
No 284
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=85.78 E-value=35 Score=35.27 Aligned_cols=152 Identities=8% Similarity=-0.046 Sum_probs=79.9
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEEc
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI 633 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 633 (824)
+|++.++++.+ .-..+.++|+.+.+-....... ..-.+++.. ++++++.|+. +.+.+++..++.....
T Consensus 144 Dg~~la~as~~---~d~~i~iwd~~~~~~~~~~~~~--~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 144 EGTVAAIASSK---VPAIMRIIDPSDLTEKFEIETR--GEVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIAR 212 (365)
T ss_dssp TSSCEEEEESC---SSCEEEEEETTTTEEEEEEECS--SCCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEE
T ss_pred CCCEEEEEECC---CCCEEEEeECCCCcEEEEeCCC--CceEEEEEccCCceEEeccc------eeEEEEEeccCcceee
Confidence 56655544321 1256888999887654332211 112223332 6676666652 3567787777665433
Q ss_pred CCCCCCCcceEEE--EECCEEEEEecCCCCCccceEEEEeCCCCCEEECC--CCCCCCcceEEEEE--CCEEEEEccCCC
Q psy17309 634 EPMRHRRSGVSCI--AYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP--DMYNPRSNFAIEVI--DDMIFAIGGFNG 707 (824)
Q Consensus 634 ~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~i~v~GG~~~ 707 (824)
............+ .-+++.++.++.++.. ...+..+|.......... .+........++.+ ++++++.|+.++
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 3222222222233 2378888887754322 224566666555543321 11111111222333 788999998765
Q ss_pred CceeeEEEEEECCCCc
Q psy17309 708 VTTIYHVECYDEKTDE 723 (824)
Q Consensus 708 ~~~~~~v~~yd~~~~~ 723 (824)
.|.+||..+.+
T Consensus 292 -----~V~iwd~~~~~ 302 (365)
T 4h5i_A 292 -----SIALVKLKDLS 302 (365)
T ss_dssp -----CEEEEETTTTE
T ss_pred -----EEEEEECCCCc
Confidence 58899988754
No 285
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=85.72 E-value=22 Score=37.10 Aligned_cols=145 Identities=8% Similarity=0.004 Sum_probs=79.9
Q ss_pred EEEECCEEEEEecccCCCCCCeEEEEeCCCCcE--Eee----cCCCcccCceEEEE-ECCEEEEEcccCCCCcCCceEEE
Q psy17309 551 TAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQW--SLI----APMNVERSDASATT-LQGKIYITGGFNGHNCLNSCEVY 623 (824)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W--~~~----~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~v~~y 623 (824)
++..++++|+|=| +.+|+++.....- ..+ +.+|.. ...+... .++++|+|-| +..++|
T Consensus 186 v~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~~-iDAa~~~~~~g~~~fFkg-------~~yWr~ 250 (365)
T 3ba0_A 186 VTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPSG-IEAAYEIEARNQVFLFKD-------DKYWLI 250 (365)
T ss_dssp EEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCSS-CCEEEEEGGGTEEEEEET-------TEEEEC
T ss_pred EEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCCC-ccEEEEecCCCEEEEEeC-------CEEEEE
Confidence 3456899999977 5677776544221 111 234522 2222222 2789999977 445666
Q ss_pred eCCCCe--E-EEcCC--CCCCC-cceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEE-----C----CCCCCC
Q psy17309 624 DPECNQ--W-TLIEP--MRHRR-SGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V----PDMYNP 686 (824)
Q Consensus 624 d~~~~~--W-~~~~~--~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p~~ 686 (824)
+..+.. + ..+.. +|..- .--++... ++++|+|-| +..++||..+.+-.. + +.+ +
T Consensus 251 ~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~--p 321 (365)
T 3ba0_A 251 SNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGI--G 321 (365)
T ss_dssp STTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTC--C
T ss_pred cCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCC--C
Confidence 543211 1 12322 33311 11233333 589999988 578999986553211 0 112 2
Q ss_pred CcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCcEEe
Q psy17309 687 RSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 687 r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
..--++... ++++|++=|. ..|+||..+.+-..
T Consensus 322 ~~iDaA~~~~~g~~YfFkg~-------~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 322 PKIDAVFYSKNKYYYFFQGS-------NQFEYDFLLQRITK 355 (365)
T ss_dssp SSCSEEEEETTTEEEEEETT-------EEEEEETTTTEEEE
T ss_pred CccceeeEecCCcEEEEeCC-------EEEEEECCccEEec
Confidence 222344445 8999999663 68999988765443
No 286
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=85.61 E-value=0.48 Score=47.98 Aligned_cols=84 Identities=11% Similarity=0.212 Sum_probs=56.1
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceec---------CHhhHHHHHHHHhhcChHhHH
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHI---------TEDNVASLLLATDFFCMSKAQ 293 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l---------~~~~v~~ll~~a~~~~i~~l~ 293 (824)
+..+.+|+.++.+.+.||.........-.. .+.+.+ +.+...
T Consensus 44 ~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~--------------~~~i~l~~~~~~~~v~~~~f~--------------- 94 (279)
T 3i3n_A 44 GREFRAHRSVLAAATEYFTPLLSGQFSESR--------------SGRVEMRKWSSEPGPEPDTVE--------------- 94 (279)
T ss_dssp -CEEEECHHHHHHHCTTSGGGCCC----------------------EEECCCCSSTTCSCHHHHH---------------
T ss_pred CeEEehHHHHHHHcCHHHHHHhcCCCcccc--------------CCeEEeccccccCCCCHHHHH---------------
Confidence 567889999999999999775443211100 122333 233322
Q ss_pred HHHHHHHhh---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy17309 294 DLCCDFIKR---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 336 (824)
Q Consensus 294 ~~c~~~l~~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f 336 (824)
...+|+.. .++.+|+..++.+|+.++++.|.+.|.+|+..++
T Consensus 95 -~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l 139 (279)
T 3i3n_A 95 -AVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKL 139 (279)
T ss_dssp -HHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred -HHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcC
Confidence 33345543 4678999999999999999999999999998864
No 287
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=85.57 E-value=36 Score=35.13 Aligned_cols=195 Identities=8% Similarity=-0.006 Sum_probs=110.7
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecC--CCcccCceEEE
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP--MNVERSDASAT 599 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~r~~~~~~ 599 (824)
..+.++++.......+.+. ...-.+++.. ++.||+.-- ....++++++.....+.+.. +..+ .+++
T Consensus 53 ~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p---~gla 122 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP---GGLA 122 (349)
T ss_dssp SCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSCC---CEEE
T ss_pred cceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEec-----cCCceEEEecCCCCceEEEeCCCCCc---cEEE
Confidence 4588888888777655332 1223444443 579998743 23679999998876554422 2222 2334
Q ss_pred E--ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC--CCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCC
Q psy17309 600 T--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPV 673 (824)
Q Consensus 600 ~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 673 (824)
+ .++.||+.-.. .+.+++++++...-+.+. .+..| .+.++. ++.||+..-.. ...|+++++.
T Consensus 123 vd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~d 190 (349)
T 3v64_C 123 VDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMD 190 (349)
T ss_dssp EETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred EecCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCC
Confidence 3 37899987542 357889998765433332 22222 233333 68899886421 3679999987
Q ss_pred CCCEEECCCCCCCCcceEEEE--ECCEEEEEccCCCCceeeEEEEEECCCCcEEecc--CCCCCccceeEEEEcCcccee
Q psy17309 674 TKTWSQVPDMYNPRSNFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT--DMNIYRSALSACVIMGLPNVY 749 (824)
Q Consensus 674 ~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~~~~~ 749 (824)
...-+.+..-. -..-.+++. .+++||+.-.. ...|+++|++...=..+. .++. -.+.++.++.+|+-
T Consensus 191 G~~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~~~~---P~giav~~~~ly~t 261 (349)
T 3v64_C 191 GSGRRIIADTH-LFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQGLPH---PFAITVFEDSLYWT 261 (349)
T ss_dssp SCSCEESCCSS-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSS---EEEEEEETTEEEEE
T ss_pred CCCcEEEEECC-CCCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCCCCC---ceEEEEECCEEEEe
Confidence 65544442211 111123343 27899998532 237899998764333321 2222 24555567777765
No 288
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=85.53 E-value=0.28 Score=40.70 Aligned_cols=62 Identities=19% Similarity=0.230 Sum_probs=46.8
Q ss_pred eeecceEEEE-cccccccccceeEEeeecccchhhhheeecccc--------------eecCHhhHHHHHHHHhhcCh
Q psy17309 227 AVHQDVIYAM-GGYNGQRRQNSVEKYNYTENQDKIEEKKLFERK--------------LHITEDNVASLLLATDFFCM 289 (824)
Q Consensus 227 ~~~~~~~~~~-~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~--------------l~l~~~~v~~ll~~a~~~~i 289 (824)
+..+..+..| .+.+ +...+.|.+++++..+++.+++|+|.-. -.+..+++.+|+.||++|+|
T Consensus 23 A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 23 AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 4455555555 2223 5555789999999999999999997643 25778899999999999875
No 289
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=85.51 E-value=21 Score=37.85 Aligned_cols=148 Identities=11% Similarity=0.044 Sum_probs=80.6
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEE
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 632 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 632 (824)
++.+++.|+.+ ..+..||+.+.+-...-..+.......++.+ ++.+++.|+.+ ..+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEEE
Confidence 46777777753 5789999988664322111111122222333 67777778765 468899998866433
Q ss_pred cCCCCCCCcceEEE-EE-----CCEEEEEecCCCCCccceEEEEeCCCCCEEEC-C---C-C------C-----------
Q psy17309 633 IEPMRHRRSGVSCI-AY-----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-P---D-M------Y----------- 684 (824)
Q Consensus 633 ~~~~p~~r~~~~~~-~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~---~-~------p----------- 684 (824)
.-.++. ......+ .. ++.+++.|+.+ ..+.+||..+.+-... . . . |
T Consensus 251 ~~~~~~-~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 251 SWSFGD-HAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp EEBCTT-CEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred EEecCC-CCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 211121 1111122 11 34566666543 4688888876542211 0 0 0 0
Q ss_pred ---CCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 685 ---NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 685 ---~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
....-.+++..++++++.||.++ .+.+||..+.+
T Consensus 325 ~~~~~~~v~~l~~~~~~~l~s~~~d~-----~i~~wd~~~~~ 361 (437)
T 3gre_A 325 GIRSLNALSTISVSNDKILLTDEATS-----SIVMFSLNELS 361 (437)
T ss_dssp CCCSGGGGCCEEEETTEEEEEEGGGT-----EEEEEETTCGG
T ss_pred ccccCCceEEEEECCceEEEecCCCC-----eEEEEECCCcc
Confidence 00111233444889999998766 68899988764
No 290
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=85.42 E-value=32 Score=34.77 Aligned_cols=183 Identities=8% Similarity=-0.043 Sum_probs=93.2
Q ss_pred eEEEEECCCCcEEEcccCCCCC-CCceeEEEEE--CCEEEEEeecCC------------CcccceEEEEECCCCceEEec
Q psy17309 476 FVETYDTRADRWVKIDQVDPMG-PRAYHGTAVI--GYNIYVIGGFDG------------NEYYNSCRCFNAVTKVWKEIA 540 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~~-~r~~~~~~~~--~~~lyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~ 540 (824)
.+..+|+.+.+...+....... ......+++. ++.||+.-.... ......+++||+.+++...+.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 3778888766544432111100 1122334443 467888642210 012356999999887765432
Q ss_pred -cCCCCcceEEEEEE-CC-EEEEEecccCCCCCCeEEEEeCCC---CcEEeecCCCcccCceEEEEE-CCEEEEEcccCC
Q psy17309 541 -PMNFKRCYVSTAVH-QD-VIYAMGGYNGQRRQNSVEKYNYTE---NQWSLIAPMNVERSDASATTL-QGKIYITGGFNG 613 (824)
Q Consensus 541 -~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~t---~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~ 613 (824)
.+..+ ..++.. ++ .||+.-.. .+.+++|++.+ ...+....++. ...+++- +|.|||......
T Consensus 182 ~~~~~p---~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 182 KELHVP---GGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp EEESCC---CEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS---EEEEEECTTSCEEEEEEEET
T ss_pred cCCccC---cceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC---CCCeEECCCCCEEEEecCcc
Confidence 12211 233333 33 58887431 26789999875 34444433332 1223222 578998754310
Q ss_pred C-----CcCCceEEEeCCCCeEEEcCCCCC---CCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCC
Q psy17309 614 H-----NCLNSCEVYDPECNQWTLIEPMRH---RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK 675 (824)
Q Consensus 614 ~-----~~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 675 (824)
. .....+.+||+....-..+.. |. .....+++..+++|||.+.. .+.+.+|++..+
T Consensus 251 ~~~~~~~~~~~v~~~d~~G~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~~-----~~~i~~~~~~~~ 314 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDEFGNILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTLF-----HGSVGILVYDKK 314 (322)
T ss_dssp TSSTTSCEEEEEEEECTTSCEEEEEEC-CTTTTTSCCCEEEEETTEEEEECSS-----CSEEEEEEC---
T ss_pred cccccCCCccEEEEECCCCCEEEEEEC-CCCCccccceEEEEeCCEEEEeecC-----CCceEEEecccc
Confidence 0 012468899997554444432 21 11222344568999987543 257888887644
No 291
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=85.41 E-value=1.2 Score=43.38 Aligned_cols=102 Identities=11% Similarity=0.049 Sum_probs=58.3
Q ss_pred EECCEEEEEecccCCCCCCeEEEEe--CCC--CcEE----ee----cCCCcc--cCceEEEEE---CCEEEEEcccCCCC
Q psy17309 553 VHQDVIYAMGGYNGQRRQNSVEKYN--YTE--NQWS----LI----APMNVE--RSDASATTL---QGKIYITGGFNGHN 615 (824)
Q Consensus 553 ~~~~~iyv~GG~~~~~~~~~~~~yd--~~t--~~W~----~~----~~~p~~--r~~~~~~~~---~~~lyv~GG~~~~~ 615 (824)
..++++|+|-| +.+|+|+ +.+ ..-. .+ +.||.. -...-+|.. ++++|+|-|
T Consensus 70 ~~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG----- 137 (227)
T 3lp9_A 70 TENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG----- 137 (227)
T ss_dssp CSTTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET-----
T ss_pred CCCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC-----
Confidence 35899999988 6789998 321 1110 11 123311 112223332 689999987
Q ss_pred cCCceEEEeCCCCeEEE-----cC-CCCCC------CcceEEEE--ECCEEEEEecCCCCCccceEEEEeCCCC
Q psy17309 616 CLNSCEVYDPECNQWTL-----IE-PMRHR------RSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTK 675 (824)
Q Consensus 616 ~~~~v~~yd~~~~~W~~-----~~-~~p~~------r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 675 (824)
+..++||..+++-.. +. .+|.. ..--++.. .++++|++-| +.-++||..+.
T Consensus 138 --~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 138 --DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp --TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred --CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 568899987654211 11 12211 11223333 3589999988 57889998765
No 292
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.98 E-value=38 Score=34.92 Aligned_cols=212 Identities=12% Similarity=0.006 Sum_probs=120.9
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 476 FVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
.+..+++.......+. . ....-.+++.. ++.||+.-- ....++++++.......+....... -.++++
T Consensus 54 ~I~~i~~~g~~~~~~~-~---~~~~~~~l~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~-p~glav 123 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLL-N---NLENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLES-PGGLAV 123 (349)
T ss_dssp CEEEECTTSCCEEEEE-C---SCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSC-CCEEEE
T ss_pred ceEEEeCCCCeeEEee-c---CCCceEEEEEeccccEEEEEec-----cCCceEEEecCCCCceEEEeCCCCC-ccEEEE
Confidence 4677777776665531 1 12223455544 688998753 2357899999887655543221111 123444
Q ss_pred --ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec--CCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCC
Q psy17309 554 --HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPEC 627 (824)
Q Consensus 554 --~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~ 627 (824)
.++.||+.-.. .+.++++++....-+.+. .+..| .++++- ++.||+..-.. ...+++++++.
T Consensus 124 d~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG 191 (349)
T 3v64_C 124 DWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDG 191 (349)
T ss_dssp ETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTS
T ss_pred ecCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCC
Confidence 37899998542 367899998766533332 23333 233443 68999874321 36799999876
Q ss_pred CeEEEcCCCCCCCcc-eEEEE--ECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEcc
Q psy17309 628 NQWTLIEPMRHRRSG-VSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGG 704 (824)
Q Consensus 628 ~~W~~~~~~p~~r~~-~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 704 (824)
..-+.+..- .... .+.+. .+++||+.-.. ...|+++|+....-+.+.... ...-.++++.++.||+..-
T Consensus 192 ~~~~~~~~~--~~~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 192 SGRRIIADT--HLFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDW 263 (349)
T ss_dssp CSCEESCCS--SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEET
T ss_pred CCcEEEEEC--CCCCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecC
Confidence 544443221 1122 23333 26899998643 368999998754323221111 1123566668999999854
Q ss_pred CCCCceeeEEEEEECCCC
Q psy17309 705 FNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~ 722 (824)
.+ ..|..+|..+.
T Consensus 264 ~~-----~~V~~~~~~~G 276 (349)
T 3v64_C 264 HT-----KSINSANKFTG 276 (349)
T ss_dssp TT-----TEEEEEETTTC
T ss_pred CC-----CeEEEEEccCC
Confidence 32 36888886554
No 293
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=84.80 E-value=39 Score=36.01 Aligned_cols=113 Identities=9% Similarity=-0.078 Sum_probs=61.6
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEE-cccCCCCCCCceeEEEEE--CCEEEEEeecC----CCcccceEEEEECC
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVK-IDQVDPMGPRAYHGTAVI--GYNIYVIGGFD----GNEYYNSCRCFNAV 532 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~----~~~~~~~~~~yd~~ 532 (824)
..+|+.-....... +.+..+|+.+.+-.. ++.. ... .+++. +..+||.--.. .+...+.+..+|+.
T Consensus 85 ~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG-----~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 85 RRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGG-----FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp TEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEEC-----SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECC-----CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 45777654322112 789999999987643 2222 222 34443 66788874210 00123679999999
Q ss_pred CCceEEeccCC-CCc-----ceEEEEE--ECCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 533 TKVWKEIAPMN-FKR-----CYVSTAV--HQDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 533 ~~~W~~~~~~~-~~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
+.+-..--+++ .+| .-+.+++ -+..+|+..- ...+.+.++|+.+++-
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~----~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF----SPAPAVGVVDLEGKTF 212 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC----SSSCEEEEEETTTTEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec----CCCCeEEEEECCCCeE
Confidence 98754221122 111 1122233 2457888642 1246799999998764
No 294
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=84.59 E-value=32 Score=35.07 Aligned_cols=141 Identities=11% Similarity=0.080 Sum_probs=69.3
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEE-eccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE-IAPMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
++.+++.|+.+ ..+..||..+++... +..- ...-.+++.. ++..++.||.+ ..+..||.....-..
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~h--~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~~~~ 154 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRFVGH--QSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGECKFS 154 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEEECC--CSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCC--CCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCceee
Confidence 45666677654 468899998876432 2111 1111222322 56666777754 457778876443222
Q ss_pred ecCCCcccCceEEEEE--C----------CEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCE
Q psy17309 586 IAPMNVERSDASATTL--Q----------GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HEC 651 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~--~----------~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 651 (824)
............++.. . +.+++.|+.+ ..+..||.....-..+.. .......+.+ +++
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~---h~~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQIRYTFKA---HESNVNHLSISPNGK 226 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEEEEEEEC---CSSCEEEEEECTTSS
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCceeEEEcC---ccccceEEEECCCCC
Confidence 2221111111222222 1 1456667655 357778843322111111 1112222333 677
Q ss_pred EEEEecCCCCCccceEEEEeCC
Q psy17309 652 IYVIGGFNGMSRMCNGEKYNPV 673 (824)
Q Consensus 652 iyv~GG~~~~~~~~~v~~yd~~ 673 (824)
.++.|+.+ ..+.+||..
T Consensus 227 ~l~sgs~d-----g~v~iwd~~ 243 (343)
T 2xzm_R 227 YIATGGKD-----KKLLIWDIL 243 (343)
T ss_dssp EEEEEETT-----CEEEEEESS
T ss_pred EEEEEcCC-----CeEEEEECC
Confidence 77888754 467888874
No 295
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=83.88 E-value=21 Score=39.97 Aligned_cols=116 Identities=12% Similarity=0.160 Sum_probs=67.6
Q ss_pred EEEECCEEEEEecccCCCCCCeEEEEeCCCCc--EEeecCCCcc---c---CceEEEEECCEEEEEcccCCCCcCCceEE
Q psy17309 551 TAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVE---R---SDASATTLQGKIYITGGFNGHNCLNSCEV 622 (824)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~---r---~~~~~~~~~~~lyv~GG~~~~~~~~~v~~ 622 (824)
-++.++.||+.+.. ..++.+|..|.+ |+.-...+.. . ...+.++.+++||+... ...+..
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 35679999998653 348999998765 8875443321 1 11334567899988532 246899
Q ss_pred EeCCCCe--EEEcCCCCCCC--cceEEEEECC------EEEEEecCC-CCCccceEEEEeCCCCC--EEE
Q psy17309 623 YDPECNQ--WTLIEPMRHRR--SGVSCIAYHE------CIYVIGGFN-GMSRMCNGEKYNPVTKT--WSQ 679 (824)
Q Consensus 623 yd~~~~~--W~~~~~~p~~r--~~~~~~~~~~------~iyv~GG~~-~~~~~~~v~~yd~~~~~--W~~ 679 (824)
+|.+|++ |+.-..-+... ...+-++.++ .||+ |... .......++.||+.+.+ |+.
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 9998875 87643211111 1112234455 5555 3311 11124578999998765 864
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=83.55 E-value=21 Score=41.07 Aligned_cols=213 Identities=9% Similarity=-0.005 Sum_probs=113.9
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCC----CceEEec--cCCCCcc
Q psy17309 476 FVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVT----KVWKEIA--PMNFKRC 547 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~----~~W~~~~--~~~~~r~ 547 (824)
.+..++..+.....+. +.....+++++. ++.||+.--. ...++++++.+ ..-..+. .+..|
T Consensus 387 ~I~~id~~~~~~~~~~----~~~~~p~gla~d~~~~~Ly~sD~~-----~~~I~~~~~~g~~~~~~~~~~i~~~~~~P-- 455 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLI----PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP-- 455 (699)
T ss_dssp C-CEECTTSCCEECCS----CCCTTCCCCEEETTTTEEEECCTT-----TTSBEEEESCCCCC-CCCCCBCCSCC--C--
T ss_pred ceEEEeCCCCcceeee----ccCcceEEEccccccCeEEEEecC-----CCeEEEEecCCCCCCcceEEEEeCCCCCc--
Confidence 4666777766655431 112233445554 6788886421 24688888875 1111111 11111
Q ss_pred eEEEEE--ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecC--CCcccCceEEEE--ECCEEEEEcccCCCCcCCceE
Q psy17309 548 YVSTAV--HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP--MNVERSDASATT--LQGKIYITGGFNGHNCLNSCE 621 (824)
Q Consensus 548 ~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~--~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~v~ 621 (824)
.++++ .++.||+.-. ..+.++++++....-+.+.. +..|+ ++++ .++.||+..- .....|+
T Consensus 456 -~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~----~~~~~I~ 522 (699)
T 1n7d_A 456 -DGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDW----GTPAKIK 522 (699)
T ss_dssp -CCEECCCSSSBCEECCT-----TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCC----SSSCCEE
T ss_pred -ceEEEEeeCCcEEEEec-----cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEccc----CCCCeEE
Confidence 22333 4678998632 23568999988776554432 22332 2333 3678887642 1125688
Q ss_pred EEeCCCCeEEEcC--CCCCCCcceEEEE--ECCEEEEEecCCCCCccceEEEEeCCCCCEEECCCC-CCCCcceEEEEEC
Q psy17309 622 VYDPECNQWTLIE--PMRHRRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM-YNPRSNFAIEVID 696 (824)
Q Consensus 622 ~yd~~~~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~ 696 (824)
++++....-+.+. .+..|. ++++ .+++||+.-.. ...|+++|+....-+.+... .....-.++++.+
T Consensus 523 ~~~~dG~~~~~l~~~~l~~Pn---Glavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~ 594 (699)
T 1n7d_A 523 KGGLNGVDIYSLVTENIQWPN---GITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE 594 (699)
T ss_dssp BCCSSSCCCCEESCSSCSSCC---CEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET
T ss_pred EEeCCCCCeeEEEeCCCCCcc---EEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEEC
Confidence 8877654333332 222221 2333 25889998643 36799999875443433322 1112334566778
Q ss_pred CEEEEEccCCCCceeeEEEEEECCCCcEE
Q psy17309 697 DMIFAIGGFNGVTTIYHVECYDEKTDEWY 725 (824)
Q Consensus 697 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 725 (824)
+.||+.-... ..|.++|+.+.+-.
T Consensus 595 ~~lywtd~~~-----~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 595 DKVFWTDIIN-----EAIFSANRLTGSDV 618 (699)
T ss_dssp TEEEEECSTT-----TCEEEEETTTEEEE
T ss_pred CEEEEEeCCC-----CeEEEEEccCCCce
Confidence 8999996322 36889998765443
No 297
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.33 E-value=12 Score=41.81 Aligned_cols=189 Identities=10% Similarity=0.024 Sum_probs=96.6
Q ss_pred CEEEEEeecCCCcccceEEEEEC--CCCceEEeccCCCCcceEEEEEEC-CEEEEEecccCCCCCCeEEEEeCCCCcEEe
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNA--VTKVWKEIAPMNFKRCYVSTAVHQ-DVIYAMGGYNGQRRQNSVEKYNYTENQWSL 585 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~~~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 585 (824)
+++...+..++......+|..+. .... ..+...+..+ ......+ +.++++.+.. +.+..||+.+.+-+.
T Consensus 75 d~~l~~~~~~~g~~~~~l~~~~~~~~g~~-~~l~~~~~~~--~~~~s~dg~~~~~~s~~~-----~~~~l~d~~~g~~~~ 146 (582)
T 3o4h_A 75 GRVILVRDVSKGAEQHALFKVNTSRPGEE-QRLEAVKPMR--ILSGVDTGEAVVFTGATE-----DRVALYALDGGGLRE 146 (582)
T ss_dssp SEEEEEEECSTTSCCEEEEEEETTSTTCC-EECTTSCSBE--EEEEEECSSCEEEEEECS-----SCEEEEEEETTEEEE
T ss_pred CeEEEEeccCCCCcceEEEEEeccCCCcc-ccccCCCCce--eeeeCCCCCeEEEEecCC-----CCceEEEccCCcEEE
Confidence 35555444322223346777887 4332 2443333222 2233444 4555555432 234478988887776
Q ss_pred ecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEE-ECCEEEEEecCCCCCcc
Q psy17309 586 IAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMSRM 664 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 664 (824)
+...+. ...+..-+|+..++++.+... ...++.+|+.+++++.+..-+. .....+. -+|+.++.+..++ .
T Consensus 147 l~~~~~---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~~~~--~~~~~~~SpDG~~l~~~~~~~---~ 217 (582)
T 3o4h_A 147 LARLPG---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEG--SFSSASISPGMKVTAGLETAR---E 217 (582)
T ss_dssp EEEESS---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEECCSSC--EEEEEEECTTSCEEEEEECSS---C
T ss_pred eecCCC---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeecCCC--ccccceECCCCCEEEEccCCC---e
Confidence 654333 222233466666655543221 2459999999998887743221 1112222 2566555443322 2
Q ss_pred ceEEEEeCCCCCEEECCCCCCCCcceE-----E--EEECCEEEEEccCCCCceeeEEEEEEC
Q psy17309 665 CNGEKYNPVTKTWSQVPDMYNPRSNFA-----I--EVIDDMIFAIGGFNGVTTIYHVECYDE 719 (824)
Q Consensus 665 ~~v~~yd~~~~~W~~~~~~p~~r~~~~-----~--~~~~~~i~v~GG~~~~~~~~~v~~yd~ 719 (824)
..++.+|+.+.+...+......-.... . ..-++++++.+..++ .+.+|+.
T Consensus 218 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g-----~~~l~~~ 274 (582)
T 3o4h_A 218 ARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG-----RSAVFID 274 (582)
T ss_dssp EEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT-----EEEEEET
T ss_pred eEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC-----cEEEEEE
Confidence 479999999988773332211100011 0 223667777766544 4566666
No 298
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=83.20 E-value=0.98 Score=39.86 Aligned_cols=85 Identities=13% Similarity=0.080 Sum_probs=55.1
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHHHHHhh
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 302 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~ 302 (824)
+..+.+|+.++.+.+.+|+......- ...+.+..-+ +...+...+|+-.
T Consensus 34 ~~~f~aHk~vLaa~S~yF~~mf~~~~------------------~~~i~l~~~~-------------~~~f~~lL~fiYt 82 (135)
T 2yy9_A 34 GLVFKAHWSVLACCSHFFQRIYGDGT------------------GGSVVLPAGF-------------AEIFGLLLDFFYT 82 (135)
T ss_dssp TEEEEECHHHHHHHCHHHHHTCC----------------------CCEEECGGG-------------HHHHHHHHHHHHH
T ss_pred CEEEehHHHHHHHhCHHHHHHHcCCC------------------CCeEEeCCCC-------------HHHHHHHHHHHhC
Confidence 45677888888888888866443321 3445554321 1223344455543
Q ss_pred ---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q psy17309 303 ---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVD 338 (824)
Q Consensus 303 ---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~ 338 (824)
.++.+|+..++.+|+.++++.|.+.|.+|+.+++..
T Consensus 83 g~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 83 GHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp SCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred CCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 477899999999999999999999999999988764
No 299
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=83.00 E-value=51 Score=34.84 Aligned_cols=192 Identities=12% Similarity=0.112 Sum_probs=103.4
Q ss_pred CCEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCc-
Q psy17309 459 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV- 535 (824)
Q Consensus 459 ~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~- 535 (824)
.+.||+... ....+..+|+.+++-..+... .. ..+ +++. ++.||+...... ..++.+|+.++.
T Consensus 141 ~g~lyv~d~-----~~~~I~~id~~~g~~~~~~~~-~~---~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 141 NNTVLAYQR-----DDPRVRLISVDDNKVTTVHPG-FK---GGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWA 206 (409)
T ss_dssp TTEEEEEET-----TTTEEEEEETTTTEEEEEEET-CC---BCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTC
T ss_pred CCCEEEEec-----CCCcEEEEECCCCEEEEeecc-CC---CCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCce
Confidence 455666653 235789999988776654222 11 112 3333 456776653211 278999987654
Q ss_pred eEEeccCC--CCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeec---CCCcccCc-e-EEEEE--CCE
Q psy17309 536 WKEIAPMN--FKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA---PMNVERSD-A-SATTL--QGK 604 (824)
Q Consensus 536 W~~~~~~~--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~---~~p~~r~~-~-~~~~~--~~~ 604 (824)
...+...+ ....-+++++. ++.||+..+ ...+++||+.+.....+. ........ . .++.. ++.
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE
Confidence 23331111 11112233333 689999422 257999999988765542 11122222 1 45544 589
Q ss_pred EEEEcccCCCCcCCceEEEeCCCCeEEEcCCC-C-C--------C-CcceEEEEE--CCEEEEEec-CCCCCccceEEEE
Q psy17309 605 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-R-H--------R-RSGVSCIAY--HECIYVIGG-FNGMSRMCNGEKY 670 (824)
Q Consensus 605 lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p-~--------~-r~~~~~~~~--~~~iyv~GG-~~~~~~~~~v~~y 670 (824)
||+.... .+.+.+||+....-...... . . . ........+ ++.||+... . ...|.++
T Consensus 281 lyv~d~~-----~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----~~~I~~~ 350 (409)
T 3hrp_A 281 FYMSDQN-----LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----GYCLRKL 350 (409)
T ss_dssp EEEEETT-----TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----TCEEEEE
T ss_pred EEEEeCC-----CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----CCEEEEE
Confidence 9997532 35789998876532222221 0 0 0 112233333 578999864 3 3578899
Q ss_pred eCCCCCEEEC
Q psy17309 671 NPVTKTWSQV 680 (824)
Q Consensus 671 d~~~~~W~~~ 680 (824)
|+.+..-+.+
T Consensus 351 ~~~~G~v~~~ 360 (409)
T 3hrp_A 351 DILDGYVSTV 360 (409)
T ss_dssp ETTTTEEEEE
T ss_pred ECCCCEEEEE
Confidence 9666655544
No 300
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=82.77 E-value=45 Score=40.41 Aligned_cols=145 Identities=9% Similarity=-0.006 Sum_probs=77.2
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEE-EEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCR-CFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~-~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..++.++..+.....+.. .+..+....... ++..+++++. ...++ .+|..+++-..+. ........++.
T Consensus 317 ~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~ 386 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPE--PLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKFE--ENLGNVFAMGV 386 (1045)
T ss_dssp TEEEEECTTSSBEEECSC--CSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCCEEECC--CCCCSEEEEEE
T ss_pred CEEEEEcCCCCceEEccC--CCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCCceEec--CCccceeeeEE
Confidence 357777777666554311 111011111122 4554555442 25788 8999888766665 22122223333
Q ss_pred -ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCC-----CCcCCceEEEeCCC
Q psy17309 554 -HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG-----HNCLNSCEVYDPEC 627 (824)
Q Consensus 554 -~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~-----~~~~~~v~~yd~~~ 627 (824)
-+++.+++++.. ..++.+|+.+.+-..+..-........+..-+|+.+++++.+. ......+..+|..+
T Consensus 387 SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 387 DRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp CTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 266666666532 4799999999887665422222112222223666666665432 12235789999998
Q ss_pred CeEEEcC
Q psy17309 628 NQWTLIE 634 (824)
Q Consensus 628 ~~W~~~~ 634 (824)
.+...+.
T Consensus 462 g~~~~l~ 468 (1045)
T 1k32_A 462 RKIFAAT 468 (1045)
T ss_dssp TEEEECS
T ss_pred CcEEEee
Confidence 8755554
No 301
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=82.65 E-value=5.2 Score=40.71 Aligned_cols=172 Identities=15% Similarity=0.233 Sum_probs=85.9
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCC-ceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCC-CCcEEe
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTK-VWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYT-ENQWSL 585 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-t~~W~~ 585 (824)
++.||+... + +++||+..+ .|..... .. .....+..++.||+... ...+++||+. ...|+.
T Consensus 70 ~g~l~v~t~-------~-l~~~d~~g~~~~~~~~~--~~-~~~~~~~~~~~l~v~t~------~~~l~~~d~~g~~~~~~ 132 (330)
T 3hxj_A 70 DGTIYFGSD-------K-VYAINPDGTEKWRFDTK--KA-IVSDFTIFEDILYVTSM------DGHLYAINTDGTEKWRF 132 (330)
T ss_dssp TTEECCSSC-------E-EEEECCCGGGGGGSCC--------CCEEEETTEEEEECT------TSEEEEECTTSCEEEEE
T ss_pred CCcEEEecC-------c-EEEECCCCcEEEEEECC--CC-cccCceEECCEEEEEec------CCEEEEEcCCCCEEEEE
Confidence 567766321 3 899997432 2532111 11 11122334888887532 2468999987 345765
Q ss_pred ecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCC-eEEEcCCCCCCCcceEEEE-ECCEEEEEecCCCCC
Q psy17309 586 IAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMS 662 (824)
Q Consensus 586 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 662 (824)
..+.+. ..+.+.. ++.||+.. . ...+.+||+... .|..-.+ ..... +.+. -++.||+..
T Consensus 133 ~~~~~~---~~~~~~~~~g~l~vgt-~-----~~~l~~~d~~g~~~~~~~~~--~~~~~-~~~~d~~g~l~v~t------ 194 (330)
T 3hxj_A 133 KTKKAI---YATPIVSEDGTIYVGS-N-----DNYLYAINPDGTEKWRFKTN--DAITS-AASIGKDGTIYFGS------ 194 (330)
T ss_dssp ECSSCC---CSCCEECTTSCEEEEC-T-----TSEEEEECTTSCEEEEEECS--SCCCS-CCEECTTCCEEEES------
T ss_pred cCCCce---eeeeEEcCCCEEEEEc-C-----CCEEEEECCCCCEeEEEecC--CCcee-eeEEcCCCEEEEEe------
Confidence 432221 1222333 67777742 2 146889998722 3655422 22222 2233 367777754
Q ss_pred ccceEEEEeCCC-CCEEECCCCCCCCcceEEEEE-CCEEEEEccCCCCceeeEEEEEECCCCc-EE
Q psy17309 663 RMCNGEKYNPVT-KTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE-WY 725 (824)
Q Consensus 663 ~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~ 725 (824)
..+++||... ..|+...... . ..+.+.- ++.||+... + ..+.+||+.... |.
T Consensus 195 --~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~v~t~-~-----~gl~~~~~~g~~~~~ 249 (330)
T 3hxj_A 195 --DKVYAINPDGTEKWNFYAGYW--T-VTRPAISEDGTIYVTSL-D-----GHLYAINPDGTEKWR 249 (330)
T ss_dssp --SSEEEECTTSCEEEEECCSSC--C-CSCCEECTTSCEEEEET-T-----TEEEEECTTSCEEEE
T ss_pred --CEEEEECCCCcEEEEEccCCc--c-eeceEECCCCeEEEEcC-C-----CeEEEECCCCCEeEE
Confidence 3578888442 3466543211 1 1222223 457777531 1 147777775543 44
No 302
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=82.64 E-value=32 Score=35.81 Aligned_cols=145 Identities=9% Similarity=0.035 Sum_probs=82.2
Q ss_pred EEEEECCEEEEEeecCCCcccceEEEEECCCCce--EEe----ccCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEEE
Q psy17309 503 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVW--KEI----APMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEK 575 (824)
Q Consensus 503 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W--~~~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 575 (824)
++...++.+|+|=| +.+|+++.....- ..+ +.+|. ....+... .++++|+|-| +.+|+
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iDAa~~~~~~g~~~fFkg-------~~yWr 249 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIEAAYEIEARNQVFLFKD-------DKYWL 249 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCCEEEEEGGGTEEEEEET-------TEEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-CccEEEEecCCCEEEEEeC-------CEEEE
Confidence 34556899999987 5677776544221 111 12332 22222222 2789999988 67888
Q ss_pred EeCCCCc--E-EeecC--CCcccCceEEEE-E--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEc---------CCCCC
Q psy17309 576 YNYTENQ--W-SLIAP--MNVERSDASATT-L--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI---------EPMRH 638 (824)
Q Consensus 576 yd~~t~~--W-~~~~~--~p~~r~~~~~~~-~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~---------~~~p~ 638 (824)
|+..+.. + +.+.. +|..-...-+|. . ++++|+|-| +..++||..+.+-..- +.+|
T Consensus 250 ~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p- 321 (365)
T 3ba0_A 250 ISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGIG- 321 (365)
T ss_dssp CSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTCC-
T ss_pred EcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCCC-
Confidence 8754321 1 12222 333211222333 3 589999977 5688999876543221 1122
Q ss_pred CCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCCEE
Q psy17309 639 RRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWS 678 (824)
Q Consensus 639 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 678 (824)
..--++... ++++|.|-| +..++||..+.+-.
T Consensus 322 -~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~ 354 (365)
T 3ba0_A 322 -PKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRIT 354 (365)
T ss_dssp -SSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEE
T ss_pred -CccceeeEecCCcEEEEeC-------CEEEEEECCccEEe
Confidence 222344444 899999988 57899998776543
No 303
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=82.27 E-value=21 Score=34.08 Aligned_cols=136 Identities=15% Similarity=0.127 Sum_probs=75.2
Q ss_pred ECCEEEEEeecCCCcccceEEEEECCCCce--EEec----cCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCC
Q psy17309 507 IGYNIYVIGGFDGNEYYNSCRCFNAVTKVW--KEIA----PMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTE 580 (824)
Q Consensus 507 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~----~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 580 (824)
.++.+|+|=| +.+|+++.....+ ..+. .+|. ...+ +...++++|+|-| +.+|+|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~IDA-A~~~~~~~yfFkG-------~~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVDA-AFSWEDKLYLIQD-------TKVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCSE-EEEETTEEEEEET-------TEEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC-CccE-EEEECCcEEEecC-------CEEEEEeCCC
Confidence 3788999987 5677776543322 1222 2332 2222 3334899999988 6799998754
Q ss_pred C-cE-----Eeec---CCCcc--cCceEEEEE---CCEEEEEcccCCCCcCCceEEEeCCCC---eEEEcCCCCCCCcce
Q psy17309 581 N-QW-----SLIA---PMNVE--RSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECN---QWTLIEPMRHRRSGV 643 (824)
Q Consensus 581 ~-~W-----~~~~---~~p~~--r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~ 643 (824)
+ +- +.+. .+|.. ....-+|.. ++++|+|-| +..++||..+. .|...+-+|. ...+
T Consensus 91 ~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~-~vdA 162 (219)
T 1hxn_A 91 GYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHE-KVDG 162 (219)
T ss_dssp SCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCS-CCSE
T ss_pred CceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCC-CcCE
Confidence 2 11 1111 23332 122334442 689999987 56788886542 3433322222 2222
Q ss_pred EEEE-----------ECCEEEEEecCCCCCccceEEEEeCC
Q psy17309 644 SCIA-----------YHECIYVIGGFNGMSRMCNGEKYNPV 673 (824)
Q Consensus 644 ~~~~-----------~~~~iyv~GG~~~~~~~~~v~~yd~~ 673 (824)
+... .++.+|.+-| +.-++||..
T Consensus 163 a~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~ 196 (219)
T 1hxn_A 163 ALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHV 196 (219)
T ss_dssp EEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSH
T ss_pred EEEccccccccceeccCCeEEEEEC-------CEEEEEeCC
Confidence 2221 3468999988 467788764
No 304
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=81.83 E-value=1.7 Score=43.20 Aligned_cols=86 Identities=9% Similarity=0.036 Sum_probs=53.7
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceec---CHhhHHHHHHHHhhcChHhHHHHHHHH
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHI---TEDNVASLLLATDFFCMSKAQDLCCDF 299 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l---~~~~v~~ll~~a~~~~i~~l~~~c~~~ 299 (824)
+..+.+|+.++.+.+.||...........+- -...+.+ +.+... ...+|
T Consensus 40 ~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~------------~~~~i~l~~v~~~~f~----------------~ll~~ 91 (256)
T 3hve_A 40 GEEIPVQKNILAAASPYIRTKLNYNPPKDDG------------STYKIELEGISVMVMR----------------EILDY 91 (256)
T ss_dssp TEEEEECHHHHHTTCHHHHHTC-----------------------CEEECSSCCHHHHH----------------HHHHH
T ss_pred CEEEechHHHHHHcCHHHHHHhCCCCCcccC------------CCCeEEeCCCCHHHHH----------------HHHhh
Confidence 5567888888888888886644322110000 0112332 333333 33345
Q ss_pred Hhh---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy17309 300 IKR---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 336 (824)
Q Consensus 300 l~~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f 336 (824)
+.. .++.+|+..++.+|+.++++.|.+.|.+|+..++
T Consensus 92 ~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 92 IFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp HHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred ccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 543 4788999999999999999999999999998764
No 305
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=81.56 E-value=51 Score=34.02 Aligned_cols=115 Identities=14% Similarity=0.090 Sum_probs=58.9
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCC----CCCCeEEEEeCCCCc
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQ----RRQNSVEKYNYTENQ 582 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~----~~~~~~~~yd~~t~~ 582 (824)
..+|+.-........+.++.||+.+++-.. .++..... .++.. +..+|+..-.... ...+.+.+||+.+.+
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~--~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLG--MVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEE--EEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEE--EecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 356665432111123578999998876532 23333322 33333 4578887532111 123568999998765
Q ss_pred EE-eecCCC----cccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeE
Q psy17309 583 WS-LIAPMN----VERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW 630 (824)
Q Consensus 583 W~-~~~~~p----~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 630 (824)
-. .++-.+ ....-+.++.. +..||+.... ..+.+.++|..+++-
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----PATSIGIVDVAKGDY 143 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES----SSEEEEEEETTTTEE
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCC----CCCeEEEEECCCCcE
Confidence 32 222111 11122333333 4577776321 125788999888754
No 306
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=81.33 E-value=52 Score=34.65 Aligned_cols=148 Identities=12% Similarity=0.180 Sum_probs=75.5
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCC--cEEeecC----CCcccCceEEEEE--CC-EEEEEcccCCCCcCCceEEEeC
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSLIAP----MNVERSDASATTL--QG-KIYITGGFNGHNCLNSCEVYDP 625 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~--~W~~~~~----~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~v~~yd~ 625 (824)
++.+++.| .+ ..+.+||..+. .+..+.. +.........+.+ ++ .+++.|+.+ ..+..||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK-----GTIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT-----SCEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC-----CeEEEEEC
Confidence 55666655 22 56888888732 2332211 1111222223333 34 678888765 36888998
Q ss_pred CCCeE-----EEcCCCCC--CC-------cceEEEEE--CCEEEEEecCCCCCccceEEEEeCCC-CCEEECCCCCCC--
Q psy17309 626 ECNQW-----TLIEPMRH--RR-------SGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVT-KTWSQVPDMYNP-- 686 (824)
Q Consensus 626 ~~~~W-----~~~~~~p~--~r-------~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~-- 686 (824)
.+.+- ..+..... .+ .....+.+ ++++++.|+. ..+.+||..+ .+ .+..+...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------~~v~iwd~~~~~~--~~~~~~~~~~ 328 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------LSVKVWDLNMENR--PVETYQVHEY 328 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------SEEEEEETTCCSS--CSCCEESCGG
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC------CeEEEEeCCCCcc--ccceeecccc
Confidence 87653 22221110 00 02223333 5677776653 5788899875 32 11111100
Q ss_pred -Cc-------------ceEEEE-ECCEEEEEccCCCCceeeEEEEEECCCCcEEe
Q psy17309 687 -RS-------------NFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 726 (824)
Q Consensus 687 -r~-------------~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 726 (824)
+. ...++. -+++.++.|+.++ .+.+||..+.+-..
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg-----~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN-----FFRMFDRNTKRDIT 378 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT-----EEEEEETTTCCEEE
T ss_pred ccccccccccccccccceEEEECCCCCEEEEeccCC-----EEEEEEcCCCccee
Confidence 00 011222 3667778888765 68899998876654
No 307
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=81.32 E-value=59 Score=39.35 Aligned_cols=223 Identities=10% Similarity=-0.032 Sum_probs=112.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEeccCCC---------C
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF---------K 545 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~---------~ 545 (824)
..++.+++....-..+.... ........-++..++++. ...++.+|..+.....+..-.. .
T Consensus 226 ~~l~~~~~~g~~~~~l~~~~----~~~~~~~SpDG~~la~~~------~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~ 295 (1045)
T 1k32_A 226 GQIYSTDLDGKDLRKHTSFT----DYYPRHLNTDGRRILFSK------GGSIYIFNPDTEKIEKIEIGDLESPEDRIISI 295 (1045)
T ss_dssp CEEEEEETTSCSCEECCCCC----SSCEEEEEESSSCEEEEE------TTEEEEECTTTCCEEECCCCCCCBCCSEEEEC
T ss_pred eEEEEEeCCCCcceEecCCC----CcceeeEcCCCCEEEEEe------CCEEEEecCCceEeeeeccCcccccccccccc
Confidence 45666776555444432111 111112223555444442 2468888886555443332100 0
Q ss_pred cceEEEE-E-ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceE-E
Q psy17309 546 RCYVSTA-V-HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCE-V 622 (824)
Q Consensus 546 r~~~~~~-~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~-~ 622 (824)
..-.+++ . -+++..+++. ...++.++..+.....+...+..+....... +++.+++++. ...++ .
T Consensus 296 ~~v~~~~~S~pdG~~la~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~ 363 (1045)
T 1k32_A 296 PSKFAEDFSPLDGDLIAFVS------RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGI 363 (1045)
T ss_dssp GGGGEEEEEECGGGCEEEEE------TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEEE
T ss_pred cccceeeecCCCCCEEEEEE------cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEEE
Confidence 0112233 3 3555444444 2468888888776655433322122222223 5555555442 24678 8
Q ss_pred EeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEE
Q psy17309 623 YDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIF 700 (824)
Q Consensus 623 yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~ 700 (824)
||..+..-..+. ... .....+.+ +++.+++++.+ ..++.+|+.+.+-..+...........+..-+++.+
T Consensus 364 ~d~~~~~~~~l~--~~~-~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~l 435 (1045)
T 1k32_A 364 YDYRTGKAEKFE--ENL-GNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFI 435 (1045)
T ss_dssp EETTTCCEEECC--CCC-CSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEE
T ss_pred EECCCCCceEec--CCc-cceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECCCCCeE
Confidence 899887766654 221 22222323 67766666542 479999999887665532111111112222367666
Q ss_pred EEccCCC-----CceeeEEEEEECCCCcEEec
Q psy17309 701 AIGGFNG-----VTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 701 v~GG~~~-----~~~~~~v~~yd~~~~~W~~~ 727 (824)
++++.+. ......+++||..+.+...+
T Consensus 436 a~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 436 AYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp EEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred EEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 6655432 12345799999998875555
No 308
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=81.02 E-value=2.4 Score=36.08 Aligned_cols=80 Identities=11% Similarity=0.070 Sum_probs=53.3
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecC--HhhHHHHHHHHhhcChHhHHHHHHHHH
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHIT--EDNVASLLLATDFFCMSKAQDLCCDFI 300 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~--~~~v~~ll~~a~~~~i~~l~~~c~~~l 300 (824)
+..+.+|+.++.+.+.+|....... -...+.|. .-+ +...+...+|+
T Consensus 31 ~~~~~aHk~vLaa~S~yF~~~f~~~------------------~~~~i~l~~~~~~-------------~~~f~~ll~~~ 79 (116)
T 2vpk_A 31 EFQFKAHRNVLASFSEYFGAIYRST------------------SENNVFLDQSQVK-------------ADGFQKLLEFI 79 (116)
T ss_dssp TEEEEECHHHHHHHCHHHHHHHTTC------------------CCSCEECCTTTCC-------------HHHHHHHHHHH
T ss_pred CEEEeccHHHHhhcCHHHHHHHcCC------------------CCCeEEeecCCCC-------------HHHHHHHHHHH
Confidence 4567788888888888887644433 02233333 111 11223334455
Q ss_pred hh---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17309 301 KR---LTTPRNCFGILLFSRDHFCKKLEEWTRKYIL 333 (824)
Q Consensus 301 ~~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~ 333 (824)
-. .++.+|+..++.+|+.++++.|.+.|.+|+.
T Consensus 80 Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 80 YTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 43 4678999999999999999999999999974
No 309
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=80.75 E-value=2.2 Score=36.96 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=53.4
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceec-CHhhHHHHHHHHhhcChHhHHHHHHHHHh
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHI-TEDNVASLLLATDFFCMSKAQDLCCDFIK 301 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l-~~~~v~~ll~~a~~~~i~~l~~~c~~~l~ 301 (824)
+..+.+|+.++.+.+.+|........ . + -...+.| ..-+. ...+...+||-
T Consensus 38 ~~~~~aHk~iLaa~S~~F~~~f~~~~----------~---e--~~~~i~l~~~~~~-------------~~f~~ll~~~Y 89 (127)
T 1r29_A 38 REQFRAHKTVLMACSGLFYSIFTDQL----------K---R--NLSVINLDPEINP-------------EGFNILLDFMY 89 (127)
T ss_dssp TEEEEECHHHHHHHCHHHHHHHTSTT----------T---T--TCSEEECCTTSCH-------------HHHHHHHHHHH
T ss_pred CEEEehHHHHHHHhCHHHHHHhcCCc----------c---C--CCCEEEeCCCCCH-------------HHHHHHHHHHc
Confidence 45677888888888888765332110 0 0 1233444 22111 12223334443
Q ss_pred h---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17309 302 R---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILR 334 (824)
Q Consensus 302 ~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~ 334 (824)
. .++.+|+..++.+|+.++++.|.+.|.+|+.+
T Consensus 90 tg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 90 TSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 3 46789999999999999999999999999865
No 310
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=80.54 E-value=41 Score=32.09 Aligned_cols=136 Identities=14% Similarity=0.214 Sum_probs=75.1
Q ss_pred ECCEEEEEecccCCCCCCeEEEEeCCCCcE--Eee----cCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCC
Q psy17309 554 HQDVIYAMGGYNGQRRQNSVEKYNYTENQW--SLI----APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPEC 627 (824)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W--~~~----~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~ 627 (824)
.+|.+|+|-| +.+|+++.....+ ..+ +.+|.. -. ++...++++|+|-| +.+++|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~~-ID-AA~~~~~~~yfFkG-------~~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPST-VD-AAFSWEDKLYLIQD-------TKVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCSS-CS-EEEEETTEEEEEET-------TEEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCCC-cc-EEEEECCcEEEecC-------CEEEEEeCCC
Confidence 4789999987 5677776544322 112 234432 22 33344899999977 5678888653
Q ss_pred C-eE-----EEcC---CCCCC--CcceEEEE-E--CCEEEEEecCCCCCccceEEEEeCCC---CCEEECCCCCCCCcce
Q psy17309 628 N-QW-----TLIE---PMRHR--RSGVSCIA-Y--HECIYVIGGFNGMSRMCNGEKYNPVT---KTWSQVPDMYNPRSNF 690 (824)
Q Consensus 628 ~-~W-----~~~~---~~p~~--r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~ 690 (824)
+ +- ..+. .+|.. ....-+|. . ++++|+|-| +..++||..+ ..|...+.+|.. ..
T Consensus 91 ~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~~-vd- 161 (219)
T 1hxn_A 91 GYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHEK-VD- 161 (219)
T ss_dssp SCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCSC-CS-
T ss_pred CceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCCC-cC-
Confidence 2 10 1111 23332 11223333 2 589999998 5789999754 234433333222 22
Q ss_pred EEEE------------ECCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 691 AIEV------------IDDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 691 ~~~~------------~~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
++.. .++.+|++-|. .-+.||..+
T Consensus 162 Aa~~~~~~~~~~~~~~~~~~~YFFkg~-------~y~r~~~~~ 197 (219)
T 1hxn_A 162 GALCMEKPLGPNSCSTSGPNLYLIHGP-------NLYCYRHVD 197 (219)
T ss_dssp EEEEESSCSSSCCSCSSSCEEEEEETT-------EEEEESSHH
T ss_pred EEEEccccccccceeccCCeEEEEECC-------EEEEEeCCc
Confidence 3333 34678888664 567776543
No 311
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=80.47 E-value=61 Score=34.09 Aligned_cols=197 Identities=11% Similarity=0.067 Sum_probs=108.3
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCC----cEE-eec-CCCcccCc
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTEN----QWS-LIA-PMNVERSD 595 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~----~W~-~~~-~~p~~r~~ 595 (824)
..+..+|+....+..+.+- .+.-.+++.. ++.||+.-- ....++++++... ..+ .+. .+. .-
T Consensus 92 ~~I~~i~l~~~~~~~~~~~--~~~~~~l~~d~~~~~lywsD~-----~~~~I~~~~~~g~~~~~~~~~~~~~~~~---~p 161 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTVISRDIQ---AP 161 (400)
T ss_dssp TEEEEECTTSCSCEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEEC------CCCEEEECSSCS---CE
T ss_pred ceeEEEccCCcceeEeccc--cCcceEEeeeeccCceEEEec-----CCCeEEEEEcccCCCCCcceEEEeCCCC---Cc
Confidence 5688888888777665332 2333455554 689999843 2357888888752 122 222 222 12
Q ss_pred eEEEE--ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC--CCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEE
Q psy17309 596 ASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEK 669 (824)
Q Consensus 596 ~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~ 669 (824)
.++++ .++.||+.-.. ...++++|++...-+.+. .+..| .+.++. ++.||+.--.. ...|++
T Consensus 162 ~glavD~~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~~----~~~I~~ 229 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT----PAKIKK 229 (400)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECSS----SCCEEE
T ss_pred ccEEEEecCCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCCC----CCEEEE
Confidence 23344 37899998542 357889998876554442 22222 233332 68899875211 257899
Q ss_pred EeCCCCCEEEC-C-CCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEeccCCC-CCccceeEEEEcC
Q psy17309 670 YNPVTKTWSQV-P-DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN-IYRSALSACVIMG 744 (824)
Q Consensus 670 yd~~~~~W~~~-~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~ 744 (824)
+++....=+.+ . .+. .-.++++- +++||+.-.. .+.|+++|.+...-..+...+ ......+.++..+
T Consensus 230 ~~~dG~~~~~~~~~~l~---~P~glavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~ 301 (400)
T 3p5b_L 230 GGLNGVDIYSLVTENIQ---WPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 301 (400)
T ss_dssp EETTSCSCEEEECSSCS---CEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETT
T ss_pred EeCCCCccEEEEECCCC---ceEEEEEEeCCCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCC
Confidence 99875433322 1 121 11233333 6899998432 347999998765433332211 1122245666777
Q ss_pred ccceec
Q psy17309 745 LPNVYD 750 (824)
Q Consensus 745 ~~~~~~ 750 (824)
.+|+-.
T Consensus 302 ~lywtd 307 (400)
T 3p5b_L 302 KVFWTD 307 (400)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 777653
No 312
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=80.33 E-value=94 Score=36.14 Aligned_cols=194 Identities=11% Similarity=0.044 Sum_probs=106.6
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCC----cEE-eec-CCCcccCc
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTEN----QWS-LIA-PMNVERSD 595 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~----~W~-~~~-~~p~~r~~ 595 (824)
..+..++.....+..+... .+...++++. ++.||+.-.. ...++++++... ..+ .+. .+..+
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~~lY~sD~~-----~~~I~~~~l~g~~~~~~~~~vi~~~l~~P--- 473 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP--- 473 (791)
T ss_dssp SSEEEECTTSCCCEEEECS--CSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---
T ss_pred cceeEeeccCCcceeeecC--CCceEEEeecccCCeeEEeecc-----ceeEEEEeccCCCCCcceeEEEecCCCCc---
Confidence 4567777777766655432 2233444544 6799998542 356888887652 222 222 22222
Q ss_pred eEEEE--ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC--CCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEE
Q psy17309 596 ASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEK 669 (824)
Q Consensus 596 ~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~ 669 (824)
.++++ .+++||+.-.. ...|+++++....-+.+. .+..| .++++. ++.||+.--. ....|++
T Consensus 474 ~GLAvD~~~~~LY~tD~~-----~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g----~~~~I~~ 541 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKK 541 (791)
T ss_dssp CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----SSCEEEE
T ss_pred ceeeeeecCCcEEEEecC-----CCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecCC----CCCeEEE
Confidence 23333 36799998532 357899998876655443 22222 233332 5899998621 1257899
Q ss_pred EeCCCCCEEECCCCCCCCcce-EEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEec-c---CCCCCccceeEEEE
Q psy17309 670 YNPVTKTWSQVPDMYNPRSNF-AIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA-T---DMNIYRSALSACVI 742 (824)
Q Consensus 670 yd~~~~~W~~~~~~p~~r~~~-~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~---~~p~~r~~~~~~~~ 742 (824)
+++....=+.+..- ..... ++++- +++||+.-.. .+.|+++|++...=..+ . .++. .++.++.
T Consensus 542 ~~~dG~~~~~lv~~--~l~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~---P~glav~ 611 (791)
T 3m0c_C 542 GGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAH---PFSLAVF 611 (791)
T ss_dssp EETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSS---EEEEEEE
T ss_pred EecCCCceEEEEeC--CCCCceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCC---CCEEEEe
Confidence 99876554443211 11122 33332 6899999532 24789999876443333 2 2332 2456667
Q ss_pred cCcccee
Q psy17309 743 MGLPNVY 749 (824)
Q Consensus 743 ~~~~~~~ 749 (824)
.+.||+-
T Consensus 612 ~~~lYwt 618 (791)
T 3m0c_C 612 EDKVFWT 618 (791)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 7777775
No 313
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=80.21 E-value=50 Score=36.37 Aligned_cols=199 Identities=9% Similarity=0.069 Sum_probs=95.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 553 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~ 553 (824)
..+..||........+... ...-.+++.. ++..++.|+.+ ..+..||.....-..+..... .-.+++.
T Consensus 366 g~v~~~~~~~~~~~~~~~~----~~~v~~~~~s~dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~--~v~~~~~ 434 (577)
T 2ymu_A 366 KTVKLWNRNGQLLQTLTGH----SSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSS--SVWGVAF 434 (577)
T ss_dssp SEEEEEETTCCEEEEEECC----SSCEEEEEECTTSSCEEEEETT-----SEEEEECTTCCEEEEEECCSS--CEEEEEE
T ss_pred CEEEEEcCCCCEEEEecCC----CCCeEEEEECCCCCEEEEEeCC-----CEEEEEeCCCCEEEEecCCCC--CeEEEEE
Confidence 3567777655444332211 1111222222 56666777644 357788854433333322111 1122222
Q ss_pred -ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEE
Q psy17309 554 -HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWT 631 (824)
Q Consensus 554 -~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 631 (824)
-++..++.|+.+ ..+..||.....-..+.....+ -.+++.. ++++++.|+.+ ..+..||.....-.
T Consensus 435 s~d~~~l~~~~~d-----~~v~~w~~~~~~~~~~~~~~~~--v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~ 502 (577)
T 2ymu_A 435 SPDDQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSS--VRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQ 502 (577)
T ss_dssp CTTSSEEEEEETT-----SEEEEEETTSCEEEEEECCSSC--EEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEE
T ss_pred CCCCCEEEEEcCC-----CEEEEEECCCCEEEEEcCCCCC--EEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEE
Confidence 256777777643 4577888765544333222111 1122222 67777777754 35777886543332
Q ss_pred EcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCC
Q psy17309 632 LIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 707 (824)
Q Consensus 632 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 707 (824)
.+.. ......++.+ ++++++.|+.+ ..+..||.....-..+.. .......+.+ +++.++.||.++
T Consensus 503 ~~~~---h~~~v~~l~~s~dg~~l~s~~~d-----g~v~lwd~~~~~~~~~~~---h~~~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 503 TLTG---HSSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTG---HSSSVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp EEEC---CSSCEEEEEECTTSSCEEEEETT-----SEEEEECTTSCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEeC---CCCCEEEEEEcCCCCEEEEEECc-----CEEEEEeCCCCEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCC
Confidence 2221 1112222333 67777777754 467888865433332211 1111112222 677777888765
No 314
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=80.21 E-value=7.1 Score=37.73 Aligned_cols=100 Identities=10% Similarity=0.088 Sum_probs=56.2
Q ss_pred ECCEEEEEcccCCCCcCCceEEEe--CCC--CeE----EEc----CCCC----CCCcceEEEEE--CCEEEEEecCCCCC
Q psy17309 601 LQGKIYITGGFNGHNCLNSCEVYD--PEC--NQW----TLI----EPMR----HRRSGVSCIAY--HECIYVIGGFNGMS 662 (824)
Q Consensus 601 ~~~~lyv~GG~~~~~~~~~v~~yd--~~~--~~W----~~~----~~~p----~~r~~~~~~~~--~~~iyv~GG~~~~~ 662 (824)
.++++|+|-| +.+++|+ +.+ ..- ..+ +.+| ..... ++... ++++|+|-|
T Consensus 71 ~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~ID-AA~~~~~~~k~yfFkG----- 137 (227)
T 3lp9_A 71 ENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGID-AAYRSTRGKEVYLFKG----- 137 (227)
T ss_dssp STTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCS-EEEECSSTTEEEEEET-----
T ss_pred CCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCccc-EEEEECCCCEEEEEEC-----
Confidence 5899999987 4577887 321 111 111 1233 11222 23332 689999998
Q ss_pred ccceEEEEeCCCCCEE-----ECC-CCCC------CCcceEEEE--ECCEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 663 RMCNGEKYNPVTKTWS-----QVP-DMYN------PRSNFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 663 ~~~~v~~yd~~~~~W~-----~~~-~~p~------~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
+..++||..+++-. .+. .+|. +..--++.. .++++|++=|. ..|.||..++
T Consensus 138 --~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~-------~Ywr~d~~~~ 202 (227)
T 3lp9_A 138 --DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD-------HYARVKVTPX 202 (227)
T ss_dssp --TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT-------EEEEEECCSS
T ss_pred --CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC-------EEEEEECCcc
Confidence 57899998754311 110 1221 111223333 36899999763 6899998775
No 315
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=80.18 E-value=1.9 Score=36.99 Aligned_cols=82 Identities=13% Similarity=0.076 Sum_probs=54.3
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHHHHHhh
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 302 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~ 302 (824)
+..+.+|+.++.+.+++|+...... ....+.+..-. +...+...+|+-.
T Consensus 33 ~~~f~aHk~vLaa~S~yF~~~f~~~------------------~~~~i~l~~~~-------------~~~f~~ll~~iYt 81 (119)
T 3b84_A 33 GLVFKAHWSVLACCSHFFQSLYGDG------------------SGGSVVLPAGF-------------AEIFGLLLDFFYT 81 (119)
T ss_dssp TEEEEECHHHHHHHCHHHHHHHTTT------------------TCCCEEECGGG-------------HHHHHHHHHHHHH
T ss_pred CEEEEeeHHHHhhcCHHHHHHHCCC------------------CCCeEEeCCCC-------------HHHHHHHHHHHcC
Confidence 4567788888888788876533321 13455554322 1223334455543
Q ss_pred ---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy17309 303 ---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 335 (824)
Q Consensus 303 ---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~ 335 (824)
.++.+|+..++.+|+.++++.|.+.|.+|+.++
T Consensus 82 g~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 82 GHLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp SCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred CCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 467899999999999999999999999998765
No 316
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=79.83 E-value=58 Score=33.38 Aligned_cols=182 Identities=6% Similarity=-0.018 Sum_probs=90.2
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 587 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~ 587 (824)
++.+.+.||.+ ..+..||..+++-...-..+. .-.++....+.+++... +.+.+||..+.. +.+.
T Consensus 70 ~~~~~~~~~~d-----~~v~iWd~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~~-------~~i~i~d~~~~~-~~~~ 134 (355)
T 3vu4_A 70 TNYVAFVTGVK-----EVVHIWDDVKKQDVSRIKVDA--PVKDLFLSREFIVVSYG-------DVISVFKFGNPW-KRIT 134 (355)
T ss_dssp SSEEEEECSST-----TEEEEEETTTTEEEEEEECSS--CEEEEEECSSEEEEEET-------TEEEEEESSTTC-CBSS
T ss_pred CCEEEEEECCc-----cEEEEEECCCCcEEEEEECCC--ceEEEEEcCCEEEEEEc-------CEEEEEECCCCc-eeeE
Confidence 45666777643 378999998876433222222 12233333445444432 468888887751 1122
Q ss_pred CCCcccCceEEEEECCEEEEE-cccCCCCcCCceEEEeCCCCe-EEE-------------cCCCCCCCcceEEEEE--CC
Q psy17309 588 PMNVERSDASATTLQGKIYIT-GGFNGHNCLNSCEVYDPECNQ-WTL-------------IEPMRHRRSGVSCIAY--HE 650 (824)
Q Consensus 588 ~~p~~r~~~~~~~~~~~lyv~-GG~~~~~~~~~v~~yd~~~~~-W~~-------------~~~~p~~r~~~~~~~~--~~ 650 (824)
.+..+ .+ .++...+.+.+. |+.+ ..+..||..+.. +.. +..+........++.+ ++
T Consensus 135 ~~~~~-~~-~~~~s~~~la~~sg~~~-----g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g 207 (355)
T 3vu4_A 135 DDIRF-GG-VCEFSNGLLVYSNEFNL-----GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS 207 (355)
T ss_dssp CCEEE-EE-EEEEETTEEEEEESSCT-----TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS
T ss_pred EeccC-Cc-eEEEEccEEEEeCCCcC-----cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC
Confidence 22221 11 122223444444 4433 468888887643 110 1111112222333333 67
Q ss_pred EEEEEecCCCCCccce-EEEEeCCCCCEEE-CCCCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 651 CIYVIGGFNGMSRMCN-GEKYNPVTKTWSQ-VPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 651 ~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
++++.|+.+ .. +.++|..+.+-.. +..-... .....+.+ +++.++.|+.++ .+.+||..+.
T Consensus 208 ~~l~s~s~d-----~~~v~iwd~~~~~~~~~~~~g~h~-~~v~~~~~s~~~~~l~s~s~d~-----~v~iw~~~~~ 272 (355)
T 3vu4_A 208 DMVATCSQD-----GTIIRVFKTEDGVLVREFRRGLDR-ADVVDMKWSTDGSKLAVVSDKW-----TLHVFEIFND 272 (355)
T ss_dssp SEEEEEETT-----CSEEEEEETTTCCEEEEEECTTCC-SCEEEEEECTTSCEEEEEETTC-----EEEEEESSCC
T ss_pred CEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCCC-CcEEEEEECCCCCEEEEEECCC-----EEEEEEccCC
Confidence 888888764 34 7889987654322 1100011 11222223 678888888764 6888887654
No 317
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=79.59 E-value=62 Score=33.64 Aligned_cols=113 Identities=9% Similarity=-0.092 Sum_probs=57.6
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCC----CcccceEEEEECCC
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDG----NEYYNSCRCFNAVT 533 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~----~~~~~~~~~yd~~~ 533 (824)
..+|+.-+...+... .+..||+.+.+-.. . .+..... .+++. +..+|+..-... +...+.+..||+.+
T Consensus 33 ~~~yv~~~~~~~~~~-~v~v~D~~t~~~~~--~--i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 33 RRSYINLPAHHSAII-QQWVLDAGSGSILG--H--VNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CEEEEeCCcccCCcc-EEEEEECCCCeEEE--E--ecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 456766541111111 78999998877532 1 2222222 33333 668888853211 11246788999987
Q ss_pred CceE-EeccCC-CCcc-----eEEEEE--ECCEEEEEecccCCCCCCeEEEEeCCCCcEE
Q psy17309 534 KVWK-EIAPMN-FKRC-----YVSTAV--HQDVIYAMGGYNGQRRQNSVEKYNYTENQWS 584 (824)
Q Consensus 534 ~~W~-~~~~~~-~~r~-----~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 584 (824)
.+-. .++ ++ .+|. -..++. -+..+|+..-. ..+.+.++| .+++-.
T Consensus 107 ~~~~~~i~-~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 107 FLPIADIE-LPDAPRFDVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGGSSD 160 (373)
T ss_pred CcEEEEEE-CCCccccccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCCCEE
Confidence 6532 222 21 1111 112222 34577776321 136789999 887643
No 318
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=79.45 E-value=3.5 Score=35.20 Aligned_cols=79 Identities=14% Similarity=0.092 Sum_probs=52.8
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHHHHHhh
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 302 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~ 302 (824)
+..+.+|+.++.+.+.||....... ...+.+..-+ +...+...+|+-.
T Consensus 36 ~~~~~aHk~vLaa~S~yF~~~f~~~-------------------~~~i~l~~~~-------------~~~f~~ll~~~Yt 83 (119)
T 2q81_A 36 GVHFKAHKAVLAACSEYFKMLFVDQ-------------------KDVVHLDISN-------------AAGLGQVLEFMYT 83 (119)
T ss_dssp TEEEEECHHHHHHHCHHHHHHHHHC-------------------CSGGGGGGCC-------------HHHHHHHHHHHHH
T ss_pred CEEEehhHHHHHHcCHHHHHHHcCC-------------------CCEEEeCCCC-------------HHHHHHHHHHHcC
Confidence 3467788888888888887644431 1112221100 1233444555544
Q ss_pred ---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17309 303 ---LTTPRNCFGILLFSRDHFCKKLEEWTRKYIL 333 (824)
Q Consensus 303 ---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~ 333 (824)
.++.+|+..++.+|+.++++.|.+.|.+|+.
T Consensus 84 g~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 84 AKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp SCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 4778999999999999999999999999874
No 319
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=79.31 E-value=19 Score=36.20 Aligned_cols=128 Identities=10% Similarity=0.104 Sum_probs=66.6
Q ss_pred cceEEEEECCCCceEEeccCCCCcceEEEEEE-CC-EEEEEecccCCCCCCeEEEEeCCCCcEEe---ecCCCcccCceE
Q psy17309 523 YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL---IAPMNVERSDAS 597 (824)
Q Consensus 523 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~---~~~~p~~r~~~~ 597 (824)
...+++||+.++++..+..+ . ...+++.. ++ .||+..........+.+++||...+.... ....+.... .+
T Consensus 168 ~~~v~~~d~~~g~~~~~~~~--~-~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p-dg 243 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMADL--D-HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP-DG 243 (305)
T ss_dssp CEEEEEECSSSCCCEEEEEE--S-SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC-CS
T ss_pred CCeEEEEcCCCCcEEEEecC--C-CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC-Ce
Confidence 35799999998888766411 1 11233333 44 58876532111113579999987654321 112211111 12
Q ss_pred EEE-ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEecCCCCCccceEEEEeC
Q psy17309 598 ATT-LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGMSRMCNGEKYNP 672 (824)
Q Consensus 598 ~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~ 672 (824)
++. -+|.||+..+ ..+.+||++...-..+. +|.. ...+.+ ++.||+... ..++++++
T Consensus 244 i~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~~-~~~~---~~~~~f~~d~~~L~it~~-------~~l~~~~~ 304 (305)
T 3dr2_A 244 FCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHIP-TPGT---ASNCTFDQAQQRLFITGG-------PCLWMLPL 304 (305)
T ss_dssp EEECTTSCEEECCS-------SEEEEECTTSCEEEEEE-CSSC---CCEEEECTTSCEEEEEET-------TEEEEEEC
T ss_pred EEECCCCCEEEecC-------CcEEEECCCCCEEEEEE-CCCc---eeEEEEeCCCCEEEEEcC-------CeEEEEEC
Confidence 222 3677887642 34899999766555443 2331 223333 346777653 35666653
No 320
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=79.24 E-value=4.2 Score=34.78 Aligned_cols=81 Identities=10% Similarity=-0.027 Sum_probs=55.3
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHHHHHhh
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 302 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~ 302 (824)
+..+.+|+.++.+.+++|+...... ...+.+..-+ +...+...+|+-.
T Consensus 37 ~~~f~aHk~vLaa~S~yF~~~f~~~-------------------~~~i~l~~~~-------------~~~f~~ll~~~Yt 84 (121)
T 1buo_A 37 SQEFHAHRTVLACTSKMFEILFHRN-------------------SQHYTLDFLS-------------PKTFQQILEYAYT 84 (121)
T ss_dssp SCEEEECHHHHHHHCHHHHHHTTSC-------------------CSEEEECSSC-------------HHHHHHHHHHHHH
T ss_pred CEEEehhHHHHhhcCHHHHHHHcCC-------------------CcEEEeCCCC-------------HHHHHHHHHhhcC
Confidence 4567888888888888887655441 2233332211 1223334455543
Q ss_pred ---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy17309 303 ---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 335 (824)
Q Consensus 303 ---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~ 335 (824)
.++.+|+..++.+|+.++++.|.+.|.+|+.+.
T Consensus 85 g~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 85 ATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp SCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 467899999999999999999999999998753
No 321
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=78.95 E-value=0.58 Score=49.57 Aligned_cols=142 Identities=13% Similarity=0.167 Sum_probs=56.8
Q ss_pred EEECCEEEEEecccCCCCCCeEEEEeCCCCc--EEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCC-
Q psy17309 552 AVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECN- 628 (824)
Q Consensus 552 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~- 628 (824)
++.++.||+.+. + ..++.+|..+.+ |+.-. ... ..+.++.++.+|+.|+.+ ..+.++|.+++
T Consensus 6 ~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~~~--~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~ 70 (369)
T 2hz6_A 6 TLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--DPV--LQVPTHVEEPAFLPDPND-----GSLYTLGSKNNE 70 (369)
T ss_dssp --CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--CCS--CCCC-----CCEEECTTT-----CCEEEC-----C
T ss_pred eeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--CCc--eecceEcCCCEEEEeCCC-----CEEEEEECCCCc
Confidence 344667776543 2 468999988764 87543 111 122234567788876543 46889998654
Q ss_pred -eEEEcCCCCCCCcceEEEE-ECCEEEEEecCCCCCccceEEEEeCCCC--CEEECCCCCCCCcceEEEEECCEEEEEcc
Q psy17309 629 -QWTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVIDDMIFAIGG 704 (824)
Q Consensus 629 -~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 704 (824)
.|+.-...+... ..+.+. .++.||+ |+. ...++.+|+.+. .|+.-.... .+ .+..++.||+ |+
T Consensus 71 ~~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~-----dg~v~a~D~~tG~~~w~~~~~~~-~~----~~p~~~~v~~-~~ 137 (369)
T 2hz6_A 71 GLTKLPFTIPELV-QASPCRSSDGILYM-GKK-----QDIWYVIDLLTGEKQQTLSSAFA-DS----LSPSTSLLYL-GR 137 (369)
T ss_dssp CSEECSCCHHHHH-TTCSCC-----CCC-CEE-----EEEEEEECCC---------------------------EEE-EE
T ss_pred eeeeeeccCcccc-ccCceEecCCEEEE-EeC-----CCEEEEEECCCCcEEEEecCCCc-cc----ccccCCEEEE-Ee
Confidence 465422111000 011111 3555554 332 246889998765 365432111 01 1113444444 43
Q ss_pred CCCCceeeEEEEEECCCCc--EEe
Q psy17309 705 FNGVTTIYHVECYDEKTDE--WYE 726 (824)
Q Consensus 705 ~~~~~~~~~v~~yd~~~~~--W~~ 726 (824)
.+ ..+..+|+++.+ |+.
T Consensus 138 ~d-----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 138 TE-----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp EE-----EEEECCCSSSSSCCCEE
T ss_pred cC-----CEEEEEECCCCCEEEeE
Confidence 22 257788877653 764
No 322
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=77.84 E-value=53 Score=31.89 Aligned_cols=178 Identities=9% Similarity=0.014 Sum_probs=99.5
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEE
Q psy17309 474 TDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVST 551 (824)
Q Consensus 474 ~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 551 (824)
...+..+++....-..+..... ..-+++++. ++.||+.-.. .+.+.++|+....-..+...... .-..+
T Consensus 57 ~~~I~~~~~~g~~~~~~~~~~~---~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~-~P~~i 127 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIRQDL---GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTGLV-NPRGI 127 (267)
T ss_dssp TTEEEEEESSSCCCEEEECTTC---CCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS-SEEEE
T ss_pred CCEEEEEecCCCCcEEEEECCC---CCccEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEEECCCC-CccEE
Confidence 3568888887654332211111 233455555 5789988642 35788999876543333221111 12334
Q ss_pred EEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCC
Q psy17309 552 AVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPEC 627 (824)
Q Consensus 552 ~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~ 627 (824)
++. ++.||+..... ....++++++....-+.+..... ....+++.- +++||+.-.. .+.+.++|+.+
T Consensus 128 ~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g 198 (267)
T 1npe_A 128 VTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQ 198 (267)
T ss_dssp EEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTE
T ss_pred EEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCC
Confidence 444 68999975321 13578888887554333322111 122334443 5789987532 36799999876
Q ss_pred CeEEEc-CCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCCCCCE
Q psy17309 628 NQWTLI-EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTW 677 (824)
Q Consensus 628 ~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 677 (824)
..-..+ ..+.. -.+++..++.||+.... .+.|.++|+.+.+-
T Consensus 199 ~~~~~~~~~~~~---P~gi~~d~~~lyva~~~-----~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 199 PGRRKVLEGLQY---PFAVTSYGKNLYYTDWK-----TNSVIAMDLAISKE 241 (267)
T ss_dssp EEEEEEEECCCS---EEEEEEETTEEEEEETT-----TTEEEEEETTTTEE
T ss_pred CceEEEecCCCC---ceEEEEeCCEEEEEECC-----CCeEEEEeCCCCCc
Confidence 432222 22222 23455668999997643 25789999987654
No 323
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=77.39 E-value=0.42 Score=41.38 Aligned_cols=46 Identities=13% Similarity=0.119 Sum_probs=38.7
Q ss_pred eecccchhhhheeecccceecCHh-hHHHHHHHHhhcChHhHH-HHHH
Q psy17309 252 NYTENQDKIEEKKLFERKLHITED-NVASLLLATDFFCMSKAQ-DLCC 297 (824)
Q Consensus 252 ~~~~~~~~~ll~~~Yt~~l~l~~~-~v~~ll~~a~~~~i~~l~-~~c~ 297 (824)
|=++..|+.||+|+-+|++.+..+ .+..+++-|++|+|+.+. +.||
T Consensus 58 DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 58 DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCC 105 (124)
T ss_dssp CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGGGBCHHH
T ss_pred cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChHHHHHHH
Confidence 558899999999999999987654 478999999999998873 5554
No 324
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=77.18 E-value=68 Score=32.79 Aligned_cols=181 Identities=10% Similarity=0.043 Sum_probs=86.3
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEe
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 539 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 539 (824)
+.+.+.|+.. ..+..+|..+++-... ...+ -.-.++....+.+++... +.+..||..+.. +.+
T Consensus 71 ~~~~~~~~~d-----~~v~iWd~~~~~~~~~--~~~~--~~v~~v~~~~~~~~~~~~-------~~i~i~d~~~~~-~~~ 133 (355)
T 3vu4_A 71 NYVAFVTGVK-----EVVHIWDDVKKQDVSR--IKVD--APVKDLFLSREFIVVSYG-------DVISVFKFGNPW-KRI 133 (355)
T ss_dssp SEEEEECSST-----TEEEEEETTTTEEEEE--EECS--SCEEEEEECSSEEEEEET-------TEEEEEESSTTC-CBS
T ss_pred CEEEEEECCc-----cEEEEEECCCCcEEEE--EECC--CceEEEEEcCCEEEEEEc-------CEEEEEECCCCc-eee
Confidence 3455666532 3788999888765431 1111 112233333555554432 468899987750 111
Q ss_pred ccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCc-EEe-------------ecCCCcccCceEEEEE--CC
Q psy17309 540 APMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSL-------------IAPMNVERSDASATTL--QG 603 (824)
Q Consensus 540 ~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~~-------------~~~~p~~r~~~~~~~~--~~ 603 (824)
..+..+. ..++...+.+.+.+|.. ...+..||..+.. +.. +..+........++.+ ++
T Consensus 134 ~~~~~~~--~~~~~s~~~la~~sg~~----~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g 207 (355)
T 3vu4_A 134 TDDIRFG--GVCEFSNGLLVYSNEFN----LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS 207 (355)
T ss_dssp SCCEEEE--EEEEEETTEEEEEESSC----TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS
T ss_pred EEeccCC--ceEEEEccEEEEeCCCc----CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC
Confidence 1111111 11222223333331322 2458888887643 110 1111111222222333 67
Q ss_pred EEEEEcccCCCCcCCc-eEEEeCCCCeEEEcCCCCC--CCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCC
Q psy17309 604 KIYITGGFNGHNCLNS-CEVYDPECNQWTLIEPMRH--RRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTK 675 (824)
Q Consensus 604 ~lyv~GG~~~~~~~~~-v~~yd~~~~~W~~~~~~p~--~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 675 (824)
++++.|+.+ .+ +..||..+.+-.. .+.. .......+.+ +++.++.|+.+ ..+.+||....
T Consensus 208 ~~l~s~s~d-----~~~v~iwd~~~~~~~~--~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 208 DMVATCSQD-----GTIIRVFKTEDGVLVR--EFRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp SEEEEEETT-----CSEEEEEETTTCCEEE--EEECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CEEEEEeCC-----CCEEEEEECCCCcEEE--EEEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 778888765 35 8889988765322 1210 1112222333 67777787754 46778887543
No 325
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=76.64 E-value=70 Score=37.94 Aligned_cols=187 Identities=11% Similarity=0.024 Sum_probs=95.7
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 587 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~ 587 (824)
++.+++.|+.+ ..+..||..+..-... ++....-.+++...+...+.|+.+ ..+.++|..+.+-...
T Consensus 28 dg~~lAsgs~D-----g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~- 94 (902)
T 2oaj_A 28 TQNLLAIATVT-----GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTT- 94 (902)
T ss_dssp TTTEEEEEETT-----SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEE-
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEE-
Confidence 55667777754 3577787765443221 221122233444446655555532 5788899887653221
Q ss_pred CCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC--------CCCCCC--cceEEEEEC--CEEE
Q psy17309 588 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--------PMRHRR--SGVSCIAYH--ECIY 653 (824)
Q Consensus 588 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--------~~p~~r--~~~~~~~~~--~~iy 653 (824)
+... ....++.+ ++...+.|+.+ ..+..||..+..-.... ..+... .-.+++... +.++
T Consensus 95 -~~~~-~~V~~v~~sp~g~~l~sgs~d-----g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 95 -VFVP-GKITSIDTDASLDWMLIGLQN-----GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp -EECS-SCEEEEECCTTCSEEEEEETT-----SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred -EcCC-CCEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 1111 11222222 55666667654 46888998887643110 011111 112233332 3566
Q ss_pred EEecCCCCCccceEEEEeCCCCCEEEC-C-CC----CC---------CC-cceEEEEE--CCEEEEEccCCCCceeeEEE
Q psy17309 654 VIGGFNGMSRMCNGEKYNPVTKTWSQV-P-DM----YN---------PR-SNFAIEVI--DDMIFAIGGFNGVTTIYHVE 715 (824)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~~----p~---------~r-~~~~~~~~--~~~i~v~GG~~~~~~~~~v~ 715 (824)
+.|+.+ ..+ .+|..+.+-... . .. +. .+ .....+.+ +++.++.|+.++ .+.
T Consensus 168 ~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg-----~i~ 236 (902)
T 2oaj_A 168 LISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN-----SLV 236 (902)
T ss_dssp EEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-----CEE
T ss_pred EEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-----eEE
Confidence 676643 457 899887653321 1 10 00 00 11222333 778888888776 588
Q ss_pred EEECCCCcEE
Q psy17309 716 CYDEKTDEWY 725 (824)
Q Consensus 716 ~yd~~~~~W~ 725 (824)
+||..+.+-.
T Consensus 237 lWd~~~g~~~ 246 (902)
T 2oaj_A 237 FWDANSGHMI 246 (902)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcEE
Confidence 8998876543
No 326
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=75.99 E-value=1.2e+02 Score=34.95 Aligned_cols=242 Identities=14% Similarity=0.142 Sum_probs=126.6
Q ss_pred CCcEEEcccCCCCCCCceeEEEEE---CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCC----cceE-EEEEE-
Q psy17309 484 ADRWVKIDQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK----RCYV-STAVH- 554 (824)
Q Consensus 484 ~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----r~~~-~~~~~- 554 (824)
..+|..+..... ..| -.++++. .+.+|+.. .. ..+++.+-...+|+.+.+.+.. .... ++++.
T Consensus 10 ~~~w~~~~~~~~-~g~-i~~i~~~p~~~~~~~~~~-~~-----ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp 81 (737)
T 2cn3_A 10 PYKWDNVVIGGG-GGF-MPGIVFNETEKDLIYARA-AI-----GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDP 81 (737)
T ss_dssp CEEEEEECCCSB-CSC-CCEEEECSSSTTCEEEEC-SS-----SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECS
T ss_pred CCeeEEcccCCC-cce-eeEEEECCCCCCEEEEEe-cC-----CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCC
Confidence 456887532221 112 2344443 25677643 11 3589999889999998764321 1222 33332
Q ss_pred --CCEEEEEecccC--CCC-CCeEEEEeCCCCcEEeecC-C------CcccCceEEEEE---CCEEEEEcccCCCCcCCc
Q psy17309 555 --QDVIYAMGGYNG--QRR-QNSVEKYNYTENQWSLIAP-M------NVERSDASATTL---QGKIYITGGFNGHNCLNS 619 (824)
Q Consensus 555 --~~~iyv~GG~~~--~~~-~~~~~~yd~~t~~W~~~~~-~------p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~ 619 (824)
.+.||+..|... ... ...+++=.=.-.+|+.+.. . |.....+.+++. .+.||+... .+ ..
T Consensus 82 ~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g----~g 156 (737)
T 2cn3_A 82 VDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR-CG----NG 156 (737)
T ss_dssp SSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS-TT----CC
T ss_pred CCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec-cC----Cc
Confidence 358998765311 111 1345444445578998742 1 111122445443 256776431 11 22
Q ss_pred eEEEeCCCCeEEEcCCCCCCC--------------cceEEEEEC----------CEEEEEecCCCCCccceEEEEeCCCC
Q psy17309 620 CEVYDPECNQWTLIEPMRHRR--------------SGVSCIAYH----------ECIYVIGGFNGMSRMCNGEKYNPVTK 675 (824)
Q Consensus 620 v~~yd~~~~~W~~~~~~p~~r--------------~~~~~~~~~----------~~iyv~GG~~~~~~~~~v~~yd~~~~ 675 (824)
+++=+-.-.+|+.+..+|... .+...+.++ +.||+.-+... ..+++=.-.-.
T Consensus 157 l~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~----~~v~~S~DgG~ 232 (737)
T 2cn3_A 157 LWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN----ESIYRSTDGGV 232 (737)
T ss_dssp EEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS----CCEEEESSTTS
T ss_pred EEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC----ccEEEEcCCCC
Confidence 333322345799987665421 112223332 26777532111 23544444567
Q ss_pred CEEECCCCCCCCcceEEEEE-CCEEEEEccCCC----CceeeEEEEEECCCCcEEeccCCCCC----ccceeEEEE
Q psy17309 676 TWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNG----VTTIYHVECYDEKTDEWYEATDMNIY----RSALSACVI 742 (824)
Q Consensus 676 ~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~----~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~ 742 (824)
+|+.+..+|.....+.++.- ++.+|+..+... ......+++++-...+|+.+...|.. +++++...+
T Consensus 233 tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v 308 (737)
T 2cn3_A 233 TWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAV 308 (737)
T ss_dssp CCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEE
T ss_pred ceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEE
Confidence 89999877764443433322 788998754321 11334689999999999999766542 444444444
No 327
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=74.74 E-value=5.9 Score=33.72 Aligned_cols=83 Identities=14% Similarity=0.011 Sum_probs=51.2
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCHhhHHHHHHHHhhcChHhHHHHHHHHHhh
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 302 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~ 302 (824)
+..+.+|+.++.+.+.+|........... -...+.+..-+ +...+...+|+-.
T Consensus 34 ~~~~~aHk~vLaa~S~~F~~~f~~~~~e~--------------~~~~i~l~~~~-------------~~~f~~ll~~~Yt 86 (120)
T 2if5_A 34 GREFPTHRSVLAACSQYFKKLFTSGAVVD--------------QQNVYEIDFVS-------------AEALTALMDFAYT 86 (120)
T ss_dssp TEEEEECHHHHHHHCHHHHHHHHC-------------------CCSEEECCSSC-------------HHHHHHHHHHHHH
T ss_pred CEEEeHHHHHHHHhCHHHHHHhcCCcccc--------------CCceEEeCCCC-------------HHHHHHHHHHHcC
Confidence 55678888888888888865333211100 01123332211 1122333344433
Q ss_pred ---cCCcchHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17309 303 ---LTTPRNCFGILLFSRDHFCKKLEEWTRKYI 332 (824)
Q Consensus 303 ---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i 332 (824)
.++.+|+..++.+|+.++++.|.+.|.+|+
T Consensus 87 ~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 87 ATLTVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp SCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 467899999999999999999999999986
No 328
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=74.30 E-value=0.56 Score=39.31 Aligned_cols=51 Identities=14% Similarity=0.098 Sum_probs=40.2
Q ss_pred ceeEEeeecccchhhhheeecccceecCHh-hHHHHHHHHhhcChHhH-HHHHH
Q psy17309 246 NSVEKYNYTENQDKIEEKKLFERKLHITED-NVASLLLATDFFCMSKA-QDLCC 297 (824)
Q Consensus 246 ~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~~-~v~~ll~~a~~~~i~~l-~~~c~ 297 (824)
+.+-+ |=++..|+.||+|+-+|++.+..+ .+..+++-|++|+|+.+ ++.||
T Consensus 40 ~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 40 QQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp TEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred CcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHH
Confidence 33443 458999999999999999987654 47889999999999886 35554
No 329
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=73.73 E-value=1.6 Score=38.60 Aligned_cols=82 Identities=15% Similarity=0.109 Sum_probs=54.7
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceec----CHhhHHHHHHHHhhcChHhHHHHHHH
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHI----TEDNVASLLLATDFFCMSKAQDLCCD 298 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l----~~~~v~~ll~~a~~~~i~~l~~~c~~ 298 (824)
+..+.+|+.++.+.+.||+........ + ...+.+ +.+.+. ...+
T Consensus 45 ~~~f~aHk~vLaa~S~yF~~~f~~~~~------e----------~~~i~l~~~v~~~~~~----------------~lL~ 92 (138)
T 2z8h_A 45 GQRFRAHRSVLAACSSYFHSRIVGQTD------A----------ELTVTLPEEVTVKGFE----------------PLIQ 92 (138)
T ss_dssp TEEEEECHHHHHHHCHHHHHHHTTCCC------T----------TEEEECCTTSCHHHHH----------------HHHH
T ss_pred CEEEechHHHHHHcCHHHHHHHhcCCC------C----------CceEEeCCCCCHHHHH----------------HHHH
Confidence 556788888888888888654332110 0 122333 222222 2334
Q ss_pred HHhh---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q psy17309 299 FIKR---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 336 (824)
Q Consensus 299 ~l~~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f 336 (824)
|+-. .++.+|+..++.+|+.++++.|.+.|.+|+..++
T Consensus 93 ~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 93 FAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp HHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred HhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 5533 4778999999999999999999999999987654
No 330
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=73.13 E-value=97 Score=32.93 Aligned_cols=114 Identities=8% Similarity=-0.096 Sum_probs=61.5
Q ss_pred CEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccC----CCCCCeEEEEeCCCCc
Q psy17309 509 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNG----QRRQNSVEKYNYTENQ 582 (824)
Q Consensus 509 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~----~~~~~~~~~yd~~t~~ 582 (824)
+.+||.-....... +.+..+|+.+++-. ..++..... .++.. +..+|+.--..+ ....+.+.++|+.+.+
T Consensus 85 ~~vyV~n~~~~~~~-~~VsVID~~t~~vv--~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 85 RRVYIQDPAHFAAI-TQQFVIDGSTGRIL--GMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp TEEEEEECTTTCSS-EEEEEEETTTTEEE--EEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CEEEEECCCcCCCC-CeEEEEECCCCEEE--EEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 56777764321111 78999999987643 222222222 33332 457888741100 0113679999999987
Q ss_pred EEeecCCC-ccc-----CceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeE
Q psy17309 583 WSLIAPMN-VER-----SDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW 630 (824)
Q Consensus 583 W~~~~~~p-~~r-----~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 630 (824)
-..--+++ .+| .-+.+++. +.++||..-. ..+.+.++|+.+.+-
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kv 212 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTF 212 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeE
Confidence 53221222 111 22333333 4578886321 136789999988764
No 331
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=72.10 E-value=70 Score=36.47 Aligned_cols=61 Identities=10% Similarity=-0.027 Sum_probs=32.6
Q ss_pred eEEEEeCCCCcE-EeecCCCcc---cCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEc
Q psy17309 572 SVEKYNYTENQW-SLIAPMNVE---RSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI 633 (824)
Q Consensus 572 ~~~~yd~~t~~W-~~~~~~p~~---r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 633 (824)
.++++|..+.+- ..+...... ......+.. +|+++++....+ .....++.+|+.+++...+
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCcceEE
Confidence 788889887762 334321111 111111222 777665543322 2235788999988876554
No 332
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=70.84 E-value=1.1e+02 Score=32.15 Aligned_cols=214 Identities=9% Similarity=-0.035 Sum_probs=119.4
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCC----ceEEeccCCCCcce
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTK----VWKEIAPMNFKRCY 548 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~----~W~~~~~~~~~r~~ 548 (824)
..+...+.....+..+. +....-.++++. ++.||+.--. ...++++++... ....+..... ..-
T Consensus 92 ~~I~~i~l~~~~~~~~~----~~~~~~~~l~~d~~~~~lywsD~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~-~~p 161 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLI----PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDI-QAP 161 (400)
T ss_dssp TEEEEECTTSCSCEEEE----CSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEEC------CCCEEEECSSC-SCE
T ss_pred ceeEEEccCCcceeEec----cccCcceEEeeeeccCceEEEecC-----CCeEEEEEcccCCCCCcceEEEeCCC-CCc
Confidence 46777777776665531 122344555555 6889987532 256888888752 2222222111 122
Q ss_pred EEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeec--CCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEE
Q psy17309 549 VSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEV 622 (824)
Q Consensus 549 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~ 622 (824)
.++++- ++.||+.-.. ...++++|+....-+.+. .+..|+ ++++- ++.||+.--. ....+++
T Consensus 162 ~glavD~~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~----~~~~I~~ 229 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKK 229 (400)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECS----SSCCEEE
T ss_pred ccEEEEecCCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCC----CCCEEEE
Confidence 344443 7899998542 357899999877655442 233332 33442 6899987421 1257899
Q ss_pred EeCCCCeEEEcCCCCCCCcce-EEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCC-CCCCcceEEEEECCE
Q psy17309 623 YDPECNQWTLIEPMRHRRSGV-SCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM-YNPRSNFAIEVIDDM 698 (824)
Q Consensus 623 yd~~~~~W~~~~~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~ 698 (824)
++++...=+.+.. ...... +.++- +++||+.-.. .+.|+++|+....-+.+... ..-..-.++++.++.
T Consensus 230 ~~~dG~~~~~~~~--~~l~~P~glavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~ 302 (400)
T 3p5b_L 230 GGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDK 302 (400)
T ss_dssp EETTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTE
T ss_pred EeCCCCccEEEEE--CCCCceEEEEEEeCCCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCE
Confidence 9987543333311 111122 33333 6899998543 46899999875443333211 111233567778999
Q ss_pred EEEEccCCCCceeeEEEEEECCCC
Q psy17309 699 IFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 699 i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
||+.--. ...|+++|..+.
T Consensus 303 lywtd~~-----~~~V~~~~~~~G 321 (400)
T 3p5b_L 303 VFWTDII-----NEAIFSANRLTG 321 (400)
T ss_dssp EEEEESS-----SCSEEEEESSSC
T ss_pred EEEecCC-----CCeEEEEEcCCC
Confidence 9998632 235888886554
No 333
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=70.59 E-value=1.6e+02 Score=34.12 Aligned_cols=197 Identities=11% Similarity=0.116 Sum_probs=105.0
Q ss_pred eEEEEECCCCceEEeccCCC-----CcceEEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecC-CC-----
Q psy17309 525 SCRCFNAVTKVWKEIAPMNF-----KRCYVSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP-MN----- 590 (824)
Q Consensus 525 ~~~~yd~~~~~W~~~~~~~~-----~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~-~p----- 590 (824)
.+++-+-...+|+.+...+. .+.-+++++. .+.+|+..|.........+++=+=.-.+|+.+.. ++
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~ 117 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGAND 117 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTS
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccC
Confidence 47777777889999765331 2234445443 2578887663211111445554445678998742 11
Q ss_pred ccc-CceEEEEE---CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCC---CCcceEEEEE----CCEEEEEecCC
Q psy17309 591 VER-SDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH---RRSGVSCIAY----HECIYVIGGFN 659 (824)
Q Consensus 591 ~~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~----~~~iyv~GG~~ 659 (824)
..| ..+.+++. .+.+|+ |... ..+++=+-.-.+|+.+..+|. .-.....+.+ .+.||+.....
T Consensus 118 ~~~~~~~~iav~p~~~~~v~~-g~~~-----~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 191 (789)
T 1sqj_A 118 MGRNNGERLAVNPFNSNEVWM-GTRT-----EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP 191 (789)
T ss_dssp TTTTSCCCEEEETTEEEEEEE-ECSS-----SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST
T ss_pred CCccceeEEEEcCCCCCEEEE-Eecc-----CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC
Confidence 122 22345544 356666 3311 234443333568999876542 1123333333 24677765321
Q ss_pred CCCccceEEEEeCCCCCEEECCCCCCCC----------------cceEEEEE--CCEEEEEccCCCC---ceeeEEEEEE
Q psy17309 660 GMSRMCNGEKYNPVTKTWSQVPDMYNPR----------------SNFAIEVI--DDMIFAIGGFNGV---TTIYHVECYD 718 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r----------------~~~~~~~~--~~~i~v~GG~~~~---~~~~~v~~yd 718 (824)
..+++=.-.-.+|+.+..+|... ..+.++.. ++.||+..+.... .....+++.+
T Consensus 192 -----~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~ 266 (789)
T 1sqj_A 192 -----QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQN 266 (789)
T ss_dssp -----TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEE
T ss_pred -----CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEe
Confidence 23444444456899987554322 01333322 7889988422100 1223578888
Q ss_pred CCCCcEEeccCCCC
Q psy17309 719 EKTDEWYEATDMNI 732 (824)
Q Consensus 719 ~~~~~W~~~~~~p~ 732 (824)
-...+|+.+...|.
T Consensus 267 DgG~tW~~~~~~~~ 280 (789)
T 1sqj_A 267 RTSGAWDDITPRVG 280 (789)
T ss_dssp TTTCCEEECCCCTT
T ss_pred CCCCceEECcCCCC
Confidence 88899999876543
No 334
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=70.41 E-value=3.9 Score=36.34 Aligned_cols=38 Identities=8% Similarity=0.053 Sum_probs=31.2
Q ss_pred HHHHHHhh---cCCcchHHHHHHHHHHcCCHHHHHHHHHHH
Q psy17309 295 LCCDFIKR---LTTPRNCFGILLFSRDHFCKKLEEWTRKYI 332 (824)
Q Consensus 295 ~c~~~l~~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i 332 (824)
...+|+-. .++.+|+..++.+|+.++++.|.+.|.+|+
T Consensus 103 ~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 103 EILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 33455543 467899999999999999999999999876
No 335
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=69.87 E-value=5.4 Score=34.08 Aligned_cols=40 Identities=15% Similarity=-0.025 Sum_probs=31.9
Q ss_pred HHHHHHhh---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy17309 295 LCCDFIKR---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILR 334 (824)
Q Consensus 295 ~c~~~l~~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~ 334 (824)
...+|+-. .++.+|+..++.+|+.++++.|.+.|.+++..
T Consensus 75 ~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 75 QLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHHTTCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 34456643 57789999999999999999999999988654
No 336
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=69.22 E-value=98 Score=34.37 Aligned_cols=259 Identities=12% Similarity=0.069 Sum_probs=139.3
Q ss_pred CCceEEEEECCCCcEEEcccCCCCCCCceeEEEEE----CCEEEEEeecC------------CCcccceEEEEECCCCc-
Q psy17309 473 PTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI----GYNIYVIGGFD------------GNEYYNSCRCFNAVTKV- 535 (824)
Q Consensus 473 ~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~------------~~~~~~~~~~yd~~~~~- 535 (824)
..+.+.+.|..+.+-..+- ..|....-|+++.. ++++|+.+.+. .+...+.+-+.|..+.+
T Consensus 110 ~~~rVavIdl~t~~~~~ii--~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v 187 (595)
T 1fwx_A 110 ANTRVARVRCDVMKCDAIL--EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEV 187 (595)
T ss_dssp TTTEEEEEETTTTEEEEEE--ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEE
T ss_pred CCCEEEEEECCCceEeeEE--eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeE
Confidence 3456888999988755532 34444456676652 67888876431 12345578889999875
Q ss_pred -eEEe-ccCC-------CCcceEEEEEEC--------------CEEEEEecc-------cC-CCCCCeEEEEeCCCCcEE
Q psy17309 536 -WKEI-APMN-------FKRCYVSTAVHQ--------------DVIYAMGGY-------NG-QRRQNSVEKYNYTENQWS 584 (824)
Q Consensus 536 -W~~~-~~~~-------~~r~~~~~~~~~--------------~~iyv~GG~-------~~-~~~~~~~~~yd~~t~~W~ 584 (824)
|+-. +.-| ..+..+.++.-. +.+.|+--- .+ ....+.+-+.|..+.+.+
T Consensus 188 ~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~ 267 (595)
T 1fwx_A 188 AWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASS 267 (595)
T ss_dssp EEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCC
T ss_pred EEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCc
Confidence 5422 1111 112222111111 112222100 01 111356888999884433
Q ss_pred e-ecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCe-E---------EEcCCCCC-CCcceEEEEECC
Q psy17309 585 L-IAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-W---------TLIEPMRH-RRSGVSCIAYHE 650 (824)
Q Consensus 585 ~-~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W---------~~~~~~p~-~r~~~~~~~~~~ 650 (824)
. +..+|.+..-|++.+. +..+||.+.. .+.+.+||..+.+ + ..+...+. .+-.|.+..-+|
T Consensus 268 ~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-----s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG 342 (595)
T 1fwx_A 268 LFTRYIPIANNPHGCNMAPDKKHLCVAGKL-----SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG 342 (595)
T ss_dssp SSEEEEEEESSCCCEEECTTSSEEEEECTT-----SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS
T ss_pred eeEEEEecCCCceEEEEcCCCCEEEEeCCC-----CCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC
Confidence 4 4556777777888777 4457776653 3788999988642 1 01122222 233344444467
Q ss_pred EEEEEecCCCCCccceEEEEeCCC--------CCEEECCCCCCCCc-ceEEEEE-------CCEEEEEccCCCCcee---
Q psy17309 651 CIYVIGGFNGMSRMCNGEKYNPVT--------KTWSQVPDMYNPRS-NFAIEVI-------DDMIFAIGGFNGVTTI--- 711 (824)
Q Consensus 651 ~iyv~GG~~~~~~~~~v~~yd~~~--------~~W~~~~~~p~~r~-~~~~~~~-------~~~i~v~GG~~~~~~~--- 711 (824)
.+|+.-..+ +++..+|.++ +.+..+..++..-. +|..+.. +..||+.-+...+..+
T Consensus 343 ~aY~t~~ld-----sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~g 417 (595)
T 1fwx_A 343 NAYTSLFLD-----SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVG 417 (595)
T ss_dssp EEEEEETTT-----TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCC
T ss_pred eEEEEEecC-----CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCC
Confidence 888886643 5677777655 23444444433222 2222221 4567777665543321
Q ss_pred ----eEEEEEECCCCcEEeccCCCCCccceeEEEEc
Q psy17309 712 ----YHVECYDEKTDEWYEATDMNIYRSALSACVIM 743 (824)
Q Consensus 712 ----~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 743 (824)
..-.+||+..++-+.+...|..-.-|-++++.
T Consensus 418 p~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~ 453 (595)
T 1fwx_A 418 PLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVH 453 (595)
T ss_dssp SSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEEC
T ss_pred CCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEcc
Confidence 23478999888888776666544445555554
No 337
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=68.64 E-value=16 Score=32.99 Aligned_cols=55 Identities=15% Similarity=0.077 Sum_probs=43.6
Q ss_pred HHHHHHHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCchhhhcCCHHHHHHHhc
Q psy17309 293 QDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIIS 359 (824)
Q Consensus 293 ~~~c~~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f~~L~~~~l~~ll~ 359 (824)
.+...+|+ .++.++++.|+..|..+++..|.+.|.+|++..+. ..+.+++.+++.
T Consensus 85 ~~wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~----------gkt~eeir~~f~ 139 (159)
T 2ast_A 85 PVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK----------GKTPEEIRKTFN 139 (159)
T ss_dssp CHHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS----------SCCHHHHHHHTT
T ss_pred hHHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----------CCCHHHHHHHcC
Confidence 34455666 48999999999999999999999999999987753 245677777764
No 338
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=68.43 E-value=2.7 Score=34.64 Aligned_cols=51 Identities=6% Similarity=-0.063 Sum_probs=39.0
Q ss_pred ceeEEeeecccchhhhheeecc-cceecCHh-hHHHHHHHHhhcChHhHH-HHHH
Q psy17309 246 NSVEKYNYTENQDKIEEKKLFE-RKLHITED-NVASLLLATDFFCMSKAQ-DLCC 297 (824)
Q Consensus 246 ~~i~l~~~~~~~~~~ll~~~Yt-~~l~l~~~-~v~~ll~~a~~~~i~~l~-~~c~ 297 (824)
+++-+ |=++..|+.||+|+-+ |++.+..+ .+..+++-|++|+|+.+. +.|.
T Consensus 42 ~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 42 NEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEIKFYELGENAFERYR 95 (100)
T ss_dssp TEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 33433 5689999999999999 89987554 468899999999997744 3443
No 339
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=66.55 E-value=1.3e+02 Score=31.44 Aligned_cols=70 Identities=13% Similarity=0.031 Sum_probs=40.8
Q ss_pred CCEEEEEecCC--C--CCccceEEEEeCCCCCEEECCCCCCCCcceEEEE-ECC--EEEEEccCCCCceeeEEEEEECCC
Q psy17309 649 HECIYVIGGFN--G--MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV-IDD--MIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 649 ~~~iyv~GG~~--~--~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~--~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
++++|+.-+.. + ...-+.|+++|+++.+-.. ..+.+..-.+++. -++ .+|+.-+.+ +++.+||..+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~--~i~vg~~~~~lavs~D~~~~ly~tn~~~-----~~VsViD~~t 363 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA--KFEMGHEIDSINVSQDEKPLLYALSTGD-----KTLYIHDAES 363 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE--EEEEEEEECEEEECSSSSCEEEEEETTT-----TEEEEEETTT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEE--EEECCCCcceEEECCCCCeEEEEEcCCC-----CeEEEEECCC
Confidence 68999974311 1 1234789999998876433 2222222233333 254 467754432 3789999998
Q ss_pred CcEE
Q psy17309 722 DEWY 725 (824)
Q Consensus 722 ~~W~ 725 (824)
.+-.
T Consensus 364 ~k~~ 367 (386)
T 3sjl_D 364 GEEL 367 (386)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 7643
No 340
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=66.29 E-value=0.6 Score=41.33 Aligned_cols=46 Identities=13% Similarity=0.119 Sum_probs=38.2
Q ss_pred eecccchhhhheeecccceecCHh-hHHHHHHHHhhcChHhH-HHHHH
Q psy17309 252 NYTENQDKIEEKKLFERKLHITED-NVASLLLATDFFCMSKA-QDLCC 297 (824)
Q Consensus 252 ~~~~~~~~~ll~~~Yt~~l~l~~~-~v~~ll~~a~~~~i~~l-~~~c~ 297 (824)
|=++..|+.||+|+-+|++.+..+ .+..+++-|++|+|+.+ ++.||
T Consensus 80 DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l~l~~CC 127 (140)
T 2nz0_B 80 DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCC 127 (140)
T ss_dssp CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGGGBCTTT
T ss_pred eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChHHHHHHH
Confidence 558899999999999999987654 47899999999999887 34443
No 341
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=66.16 E-value=1.5e+02 Score=32.19 Aligned_cols=208 Identities=8% Similarity=0.061 Sum_probs=102.8
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCceeEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEE-
Q psy17309 476 FVETYDTRADRWVKIDQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV- 553 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~- 553 (824)
.+..+|.....-..+... ...-.+++.. ++..++.|+.+ ..+..||.....-..+.....+ -.+++.
T Consensus 326 ~i~~w~~~~~~~~~~~~~----~~~v~~~~~s~~g~~l~~~~~d-----g~v~~~~~~~~~~~~~~~~~~~--v~~~~~s 394 (577)
T 2ymu_A 326 TVKLWNRNGQHLQTLTGH----SSSVWGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSS--VRGVAFS 394 (577)
T ss_dssp CEEEEETTSCEEEEECCC----SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTCCEEEEEECCSSC--EEEEEEC
T ss_pred eEEEEeCCCCeeEEEeCC----CCCEEEEEECCCCCEEEEEeCC-----CEEEEEcCCCCEEEEecCCCCC--eEEEEEC
Confidence 466777766554443211 1112233333 56666777643 3577788655443333221111 112222
Q ss_pred ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-CCEEEEEcccCCCCcCCceEEEeCCCCeEEE
Q psy17309 554 HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 632 (824)
Q Consensus 554 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 632 (824)
-+++.++.|+.+ ..+..||.....-..+.....+ -.+++.. +++.++.|+.+ ..+..||.....-..
T Consensus 395 ~dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~~--v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~~~~~ 462 (577)
T 2ymu_A 395 PDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSS--VWGVAFSPDDQTIASASDD-----KTVKLWNRNGQLLQT 462 (577)
T ss_dssp TTSSCEEEEETT-----SEEEEECTTCCEEEEEECCSSC--EEEEEECTTSSEEEEEETT-----SEEEEEETTSCEEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEeCCCCEEEEecCCCCC--eEEEEECCCCCEEEEEcCC-----CEEEEEECCCCEEEE
Confidence 256667777643 4677888654433332221111 1122222 56677777654 357788876554444
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE--CCEEEEEccCCCC
Q psy17309 633 IEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGV 708 (824)
Q Consensus 633 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 708 (824)
+... .....++.+ ++++++.|+.+ ..+.+||.....-..+.. .......+.+ ++++++.||.++
T Consensus 463 ~~~~---~~~v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~~~~~---h~~~v~~l~~s~dg~~l~s~~~dg- 530 (577)
T 2ymu_A 463 LTGH---SSSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDK- 530 (577)
T ss_dssp EECC---SSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTS-
T ss_pred EcCC---CCCEEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEEEEeC---CCCCEEEEEEcCCCCEEEEEECcC-
Confidence 3321 122222323 67888887754 467788865432222211 1111122222 678888888765
Q ss_pred ceeeEEEEEECCCC
Q psy17309 709 TTIYHVECYDEKTD 722 (824)
Q Consensus 709 ~~~~~v~~yd~~~~ 722 (824)
.+.+||....
T Consensus 531 ----~v~lwd~~~~ 540 (577)
T 2ymu_A 531 ----TVKLWNRNGQ 540 (577)
T ss_dssp ----EEEEECTTSC
T ss_pred ----EEEEEeCCCC
Confidence 5788886443
No 342
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=65.98 E-value=27 Score=40.12 Aligned_cols=196 Identities=11% Similarity=0.072 Sum_probs=100.0
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCC----cEEeec--CCCcccCc
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTEN----QWSLIA--PMNVERSD 595 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~----~W~~~~--~~p~~r~~ 595 (824)
..+..+++.+.....+... .+.-+++++. ++.||+.-- ....++++++.+. .-..+. .+..+
T Consensus 386 ~~I~~id~~~~~~~~~~~~--~~~p~gla~d~~~~~Ly~sD~-----~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P--- 455 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTVISRDIQAP--- 455 (699)
T ss_dssp TC-CEECTTSCCEECCSCC--CTTCCCCEEETTTTEEEECCT-----TTTSBEEEESCCCCC-CCCCCBCCSCC--C---
T ss_pred cceEEEeCCCCcceeeecc--CcceEEEccccccCeEEEEec-----CCCeEEEEecCCCCCCcceEEEEeCCCCCc---
Confidence 4567778777666544322 2223344444 678988632 2356888888751 111111 11111
Q ss_pred eEEEE--ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCC--CCCCCcceEEEE--ECCEEEEEecCCCCCccceEEE
Q psy17309 596 ASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP--MRHRRSGVSCIA--YHECIYVIGGFNGMSRMCNGEK 669 (824)
Q Consensus 596 ~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~ 669 (824)
.++++ .++.||+.-. ....|.++|+....-+.+.. +..|+ ++++ .++.||+..-. ....|++
T Consensus 456 ~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~----~~~~I~~ 523 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKK 523 (699)
T ss_dssp CCEECCCSSSBCEECCT-----TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS----SSCCEEB
T ss_pred ceEEEEeeCCcEEEEec-----cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC----CCCeEEE
Confidence 23333 4678998632 23578999988765444432 23332 2232 36788876421 1257888
Q ss_pred EeCCCCCEEECC--CCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEeccCCC-CCccceeEEEEcC
Q psy17309 670 YNPVTKTWSQVP--DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN-IYRSALSACVIMG 744 (824)
Q Consensus 670 yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~ 744 (824)
+++....-+.+. .+..| .++++- +++||+.-.. ...|+++|++...-+.+...+ ......++++..+
T Consensus 524 ~~~dG~~~~~l~~~~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~ 595 (699)
T 1n7d_A 524 GGLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED 595 (699)
T ss_dssp CCSSSCCCCEESCSSCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT
T ss_pred EeCCCCCeeEEEeCCCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECC
Confidence 887654332221 22222 223332 5789998543 247889998764434332211 1122234555666
Q ss_pred cccee
Q psy17309 745 LPNVY 749 (824)
Q Consensus 745 ~~~~~ 749 (824)
.+|+-
T Consensus 596 ~lywt 600 (699)
T 1n7d_A 596 KVFWT 600 (699)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66655
No 343
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=65.84 E-value=2e+02 Score=33.36 Aligned_cols=210 Identities=11% Similarity=0.007 Sum_probs=114.4
Q ss_pred EEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCC----ceEE-ec-cCCCCcce
Q psy17309 477 VETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTK----VWKE-IA-PMNFKRCY 548 (824)
Q Consensus 477 ~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~----~W~~-~~-~~~~~r~~ 548 (824)
+..++.....+..+.. ..+...++++. ++.||+.-.. ...++++++... .... +. .+..|
T Consensus 406 Ir~i~l~~~~~~~l~~----~~~~~~gl~~d~~~~~lY~sD~~-----~~~I~~~~l~g~~~~~~~~~vi~~~l~~P--- 473 (791)
T 3m0c_C 406 VRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP--- 473 (791)
T ss_dssp EEEECTTSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---
T ss_pred eeEeeccCCcceeeec----CCCceEEEeecccCCeeEEeecc-----ceeEEEEeccCCCCCcceeEEEecCCCCc---
Confidence 4445555444444311 12333455554 6789988642 256788887652 2222 22 22222
Q ss_pred EEEEE--ECCEEEEEecccCCCCCCeEEEEeCCCCcEEeec--CCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEE
Q psy17309 549 VSTAV--HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEV 622 (824)
Q Consensus 549 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~ 622 (824)
.++++ .++.||+.-. ..+.++++++....-+.+. .+..|+ ++++- ++.||+.-- .....|++
T Consensus 474 ~GLAvD~~~~~LY~tD~-----~~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~----g~~~~I~~ 541 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDW----GTPAKIKK 541 (791)
T ss_dssp CEEEEETTTTEEEEEET-----TTTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEEC----SSSCEEEE
T ss_pred ceeeeeecCCcEEEEec-----CCCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecC----CCCCeEEE
Confidence 23444 3779999853 2468999999877655543 333332 34442 689999741 11257899
Q ss_pred EeCCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEecCCCCCccceEEEEeCCCCCEEEC-CCCCCCCcceEEEEECCE
Q psy17309 623 YDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDDM 698 (824)
Q Consensus 623 yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~ 698 (824)
+++....-+.+..- ........++ +++||+.-.. .+.|+++|+....=..+ .....-....++++.+++
T Consensus 542 ~~~dG~~~~~lv~~--~l~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~ 614 (791)
T 3m0c_C 542 GGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDK 614 (791)
T ss_dssp EETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTE
T ss_pred EecCCCceEEEEeC--CCCCceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCE
Confidence 99876554443221 1122233332 6899998543 46899999875443333 211111233567778999
Q ss_pred EEEEccCCCCceeeEEEEEECCCC
Q psy17309 699 IFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 699 i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
||+.--.+ ..|+++|..+.
T Consensus 615 lYwtD~~~-----~~I~~~dk~tG 633 (791)
T 3m0c_C 615 VFWTDIIN-----EAIFSANRLTG 633 (791)
T ss_dssp EEEEETTT-----TEEEEEETTTC
T ss_pred EEEEECCC-----CEEEEEeCCCC
Confidence 99986432 36777775443
No 344
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=65.32 E-value=4.7 Score=36.93 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=31.6
Q ss_pred ecCHhhHHHHHHHHhhcChHhHHHHHHHHHhhcCC
Q psy17309 271 HITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTT 305 (824)
Q Consensus 271 ~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~~l~ 305 (824)
.++.+|+.+++..|+.++++.|++.|.+|+.+++.
T Consensus 131 ~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 131 NLSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred hCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 36778999999999999999999999999998775
No 345
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=64.60 E-value=1.4e+02 Score=31.12 Aligned_cols=103 Identities=9% Similarity=0.160 Sum_probs=53.4
Q ss_pred CCEEEEEcccCCCCcCCceEEEeCCCC--eEEEcCC----CCCCCcceEEEEE--CC-EEEEEecCCCCCccceEEEEeC
Q psy17309 602 QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEP----MRHRRSGVSCIAY--HE-CIYVIGGFNGMSRMCNGEKYNP 672 (824)
Q Consensus 602 ~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~----~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~ 672 (824)
++++++.| .+ ..+..||..+. .+..+.. +........++.+ ++ .+++.|+.+ ..+.+||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK-----GTIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT-----SCEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC-----CeEEEEEC
Confidence 56666665 33 46888888732 2332211 1111222333333 34 788888764 46889998
Q ss_pred CCCCE-----EECCCCCCC--C-------cceEEEEE--CCEEEEEccCCCCceeeEEEEEECCC
Q psy17309 673 VTKTW-----SQVPDMYNP--R-------SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 673 ~~~~W-----~~~~~~p~~--r-------~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 721 (824)
.+.+- ..+.....+ + .....+.+ ++++++.|+. ..+.+||..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------~~v~iwd~~~ 315 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------LSVKVWDLNM 315 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------SEEEEEETTC
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC------CeEEEEeCCC
Confidence 77653 222211100 0 02222333 6677777764 2788999876
No 346
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=64.60 E-value=1.3e+02 Score=30.68 Aligned_cols=216 Identities=11% Similarity=0.126 Sum_probs=107.5
Q ss_pred CceEEEEECCCCcEEEcccCC----CCCCCceeEEEE----ECCEEEEEeec------CCCc--ccceEEEEECC---CC
Q psy17309 474 TDFVETYDTRADRWVKIDQVD----PMGPRAYHGTAV----IGYNIYVIGGF------DGNE--YYNSCRCFNAV---TK 534 (824)
Q Consensus 474 ~~~~~~yd~~~~~W~~~~~~~----~~~~r~~~~~~~----~~~~lyv~GG~------~~~~--~~~~~~~yd~~---~~ 534 (824)
...|..+|+..+.-..+..+. ........++.+ -+++|+++.-. .+.. ..+.+.+||+. ++
T Consensus 34 ~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg 113 (334)
T 2p9w_A 34 KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS 113 (334)
T ss_dssp TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC
T ss_pred CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC
Confidence 356888999866544432211 111223345555 25788886321 0111 24679999988 44
Q ss_pred c--eEE-eccCCCC-------cce-EEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCc---EEeecCCCcccCceEE
Q psy17309 535 V--WKE-IAPMNFK-------RCY-VSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAPMNVERSDASA 598 (824)
Q Consensus 535 ~--W~~-~~~~~~~-------r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~---W~~~~~~p~~r~~~~~ 598 (824)
+ |.. ++..... +.. ..=.++ +|.+||.+... ...++++++.... |-.-.+....+.+...
T Consensus 114 ~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~----~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nG 189 (334)
T 2p9w_A 114 KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG----MPAIARVSADGKTVSTFAWESGNGGQRPGYSG 189 (334)
T ss_dssp CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES----SCEEEEECTTSCCEEEEEECCCCSSSCCSCSE
T ss_pred CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC----CCeEEEEeCCCCEEeeeeecCCCcccccCcce
Confidence 3 542 2221111 222 222223 68999987642 1569999998653 5432333344555544
Q ss_pred E-EE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCC----CCCCCcceE---EEEECCEEEEEecCCCCCccceEE
Q psy17309 599 T-TL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP----MRHRRSGVS---CIAYHECIYVIGGFNGMSRMCNGE 668 (824)
Q Consensus 599 ~-~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~----~p~~r~~~~---~~~~~~~iyv~GG~~~~~~~~~v~ 668 (824)
. .. +..|++..+ . ..+.+||..+-....++. ....-.... ..-.+|++.++.-. .+.+.
T Consensus 190 Iv~~pdg~~Liv~~~-~-----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~-----~~~~~ 258 (334)
T 2p9w_A 190 ITFDPHSNKLIAFGG-P-----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR-----APYAI 258 (334)
T ss_dssp EEEETTTTEEEEESS-S-----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE-----TTEEE
T ss_pred EEEeCCCCEEEEEcC-C-----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC-----CCCEE
Confidence 4 44 446777654 2 568899987432201110 000111112 22358888555432 12334
Q ss_pred EEeCCCCCEEECC---CCCC---CCcceEEEE----ECCEEEEEccC
Q psy17309 669 KYNPVTKTWSQVP---DMYN---PRSNFAIEV----IDDMIFAIGGF 705 (824)
Q Consensus 669 ~yd~~~~~W~~~~---~~p~---~r~~~~~~~----~~~~i~v~GG~ 705 (824)
.+-...+ |+... ..|. ++....+++ .+++||++.+.
T Consensus 259 ~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 259 SFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECC
T ss_pred EEECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeee
Confidence 4433333 87652 1222 333333444 57899999764
No 347
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=64.38 E-value=52 Score=37.58 Aligned_cols=196 Identities=8% Similarity=-0.117 Sum_probs=94.7
Q ss_pred eEEEEECCCCceEEeccCCCC---cceEEEEEECCEEEEEecccCC----CCCCeEEEEeCCCCcEEeecCCCccc--Cc
Q psy17309 525 SCRCFNAVTKVWKEIAPMNFK---RCYVSTAVHQDVIYAMGGYNGQ----RRQNSVEKYNYTENQWSLIAPMNVER--SD 595 (824)
Q Consensus 525 ~~~~yd~~~~~W~~~~~~~~~---r~~~~~~~~~~~iyv~GG~~~~----~~~~~~~~yd~~t~~W~~~~~~p~~r--~~ 595 (824)
.++.+|+.+++-..+...... ........-+|+..+++..+.. .....++++|..+.+-..+....... ..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 117 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ 117 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc
Confidence 577888877765443322111 1111222236666666543322 12478999999988765554332211 11
Q ss_pred eEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCc----------------ceEEEEE--CCEEEEEec
Q psy17309 596 ASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRS----------------GVSCIAY--HECIYVIGG 657 (824)
Q Consensus 596 ~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~----------------~~~~~~~--~~~iyv~GG 657 (824)
..+..-+|+..+++.. .+++.+|..+++-..+........ ....+.. +|+.++++.
T Consensus 118 ~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp BCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ccEECCCCCEEEEEEC------CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 1111225544444432 367777777766554432211100 0122222 555555543
Q ss_pred CCCC-----------------------------CccceEEEEeCCCCC-EEECCCCCCC---CcceEEEEE--CCEEEEE
Q psy17309 658 FNGM-----------------------------SRMCNGEKYNPVTKT-WSQVPDMYNP---RSNFAIEVI--DDMIFAI 702 (824)
Q Consensus 658 ~~~~-----------------------------~~~~~v~~yd~~~~~-W~~~~~~p~~---r~~~~~~~~--~~~i~v~ 702 (824)
.+.. .....++++|..+.+ ...+...... ......+.+ +++++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 192 INDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp EECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred ECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 2210 112378899988776 3444322111 111122222 7787665
Q ss_pred ccCCCCceeeEEEEEECCCCcEEec
Q psy17309 703 GGFNGVTTIYHVECYDEKTDEWYEA 727 (824)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~~~W~~~ 727 (824)
..... .....++++|+.+.+...+
T Consensus 272 ~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 272 WLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEETT-SCEEEEEEEETTTCCEEEE
T ss_pred EEcCC-CCeEEEEEEeCCCCcceEE
Confidence 53322 2335788999988765543
No 348
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=62.38 E-value=2e+02 Score=33.09 Aligned_cols=200 Identities=9% Similarity=-0.052 Sum_probs=95.0
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCC-ceEEeccCCCCcceEEEEE-ECC-EEEEEecccCCCCCCeEEEEeCCCCcE-
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTK-VWKEIAPMNFKRCYVSTAV-HQD-VIYAMGGYNGQRRQNSVEKYNYTENQW- 583 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W- 583 (824)
+++.++++-...+.....++++|..++ +. ++.. .+......+. -++ .|+.. -.+.......+++.++.+..=
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~~-~~~~~~~~~WspDg~~l~y~-~~d~~~~~~~v~~~~lgt~~~~ 260 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IADK-VSGTNGEIVWGPDHTSLFYV-TKDETLRENKVWRHVMGKLQSE 260 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCCC-EEEECSCCEECSSTTEEEEE-EECTTCCEEEEEEEETTSCGGG
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCcc-ccCceeeEEEecCCCEEEEE-EECCCCCCCEEEEEECCCCchh
Confidence 455444443322222346999999887 52 1110 0111111122 243 44443 222222224688888776531
Q ss_pred -EeecCCCcccCceEEEEE-CC-EEEEEcccCCCCcCCceEEEeCCCC--eE--EEcCCCCCCCcceEEE-EECCEEEEE
Q psy17309 584 -SLIAPMNVERSDASATTL-QG-KIYITGGFNGHNCLNSCEVYDPECN--QW--TLIEPMRHRRSGVSCI-AYHECIYVI 655 (824)
Q Consensus 584 -~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~--~W--~~~~~~p~~r~~~~~~-~~~~~iyv~ 655 (824)
..+-.-+........... ++ .|++..... ....++.+|..+. .+ +.+.+-... ...... ..++.||+.
T Consensus 261 ~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~---~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~~ 336 (751)
T 2xe4_A 261 DVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP---ETAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVIL 336 (751)
T ss_dssp CEEEEECCCTTCEEEEEECTTSSEEEEEEECS---SCEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEEE
T ss_pred cEEEEecCCCceEEEEEECCCCCEEEEEecCC---CCceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEEE
Confidence 111111222222222222 44 444443221 2467889998775 46 555432211 112222 237788888
Q ss_pred ecCCCCCccceEEEEeCCC-CCEEE-CCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEEC
Q psy17309 656 GGFNGMSRMCNGEKYNPVT-KTWSQ-VPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDE 719 (824)
Q Consensus 656 GG~~~~~~~~~v~~yd~~~-~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 719 (824)
.-.+ ......++.+|..+ ..|+. +-+-.......+....++.|++..-.++ ...++++|+
T Consensus 337 t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g---~~~l~~~dl 398 (751)
T 2xe4_A 337 TNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG---LTRIWTMMA 398 (751)
T ss_dssp ECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT---EEEEEEEEC
T ss_pred eCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC---EEEEEEEec
Confidence 6543 12245789999876 57876 4221111122233445778887765443 347888986
No 349
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=62.25 E-value=1.1 Score=38.08 Aligned_cols=54 Identities=13% Similarity=0.009 Sum_probs=41.3
Q ss_pred eecccchhhhheeecccceecCHh-hHHHHHHHHhhcChHhHHH--HHHHHHhhcCC
Q psy17309 252 NYTENQDKIEEKKLFERKLHITED-NVASLLLATDFFCMSKAQD--LCCDFIKRLTT 305 (824)
Q Consensus 252 ~~~~~~~~~ll~~~Yt~~l~l~~~-~v~~ll~~a~~~~i~~l~~--~c~~~l~~~l~ 305 (824)
|=++..|+.||+|+-+|++.+..+ .+..+++-|++|+|+...- .|..-+.++.+
T Consensus 51 DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~fy~i~~~~l~~CC~~~~~~~~~ 107 (115)
T 3kvt_A 51 DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTAHRD 107 (115)
T ss_dssp CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHHHHTCCGGGBCGGGSHHHHSCC-
T ss_pred ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHHHHhCCChHHHHHHHHHHHHhccc
Confidence 568999999999999999988664 4789999999999977543 25455544443
No 350
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=60.92 E-value=7.5 Score=34.27 Aligned_cols=34 Identities=9% Similarity=0.042 Sum_probs=26.5
Q ss_pred CCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy17309 304 TTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFV 337 (824)
Q Consensus 304 l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~ 337 (824)
++.+|+..++.+|+.++++.|.+.|.+|+.+++.
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~ 124 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNLS 124 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC------
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence 5678999999999999999999999999987653
No 351
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=60.85 E-value=3 Score=36.23 Aligned_cols=82 Identities=11% Similarity=0.018 Sum_probs=48.3
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecC-HhhHHHHHHHHhhcChHhHHHHHHHHHh
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHIT-EDNVASLLLATDFFCMSKAQDLCCDFIK 301 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~-~~~v~~ll~~a~~~~i~~l~~~c~~~l~ 301 (824)
+..+.+|+.++.+.+.+|+...... -...+.+. .-+ ++..+...+|+-
T Consensus 42 ~~~~~~Hk~vLaa~S~~F~~~f~~~------------------~~~~i~l~~~~~-------------~~~f~~ll~~iY 90 (129)
T 3ga1_A 42 GHAFKAHRAVLAASSSYFRDLFNNS------------------RSAVVELPAAVQ-------------PQSFQQILSFCY 90 (129)
T ss_dssp TEEEEECHHHHHHHBHHHHHHHHHC------------------CCSEEECCTTCC-------------HHHHHHHHHHHH
T ss_pred CEEEEehHHHHHHcCHHHHHHHcCC------------------CCCEEEECCCCC-------------HHHHHHHHHHHh
Confidence 3567778888877777876644332 22344442 111 112233344553
Q ss_pred h---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q psy17309 302 R---LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 335 (824)
Q Consensus 302 ~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~ 335 (824)
. .++.+|+..++.+|+.++++.|.+.|.+|+.+.
T Consensus 91 tg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 91 TGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HSEEECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred CCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 3 678999999999999999999999999998764
No 352
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=59.57 E-value=2.5e+02 Score=32.36 Aligned_cols=197 Identities=13% Similarity=0.108 Sum_probs=105.8
Q ss_pred eEEEEECCCCceEEecc-C-----CC---C-cceEEEEEE---CCEEEEEeccc-CCCCCCeEEEEeCCCCcEEeecC-C
Q psy17309 525 SCRCFNAVTKVWKEIAP-M-----NF---K-RCYVSTAVH---QDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAP-M 589 (824)
Q Consensus 525 ~~~~yd~~~~~W~~~~~-~-----~~---~-r~~~~~~~~---~~~iyv~GG~~-~~~~~~~~~~yd~~t~~W~~~~~-~ 589 (824)
.+++-+-...+|+.+.. + +. . ...+++++. .+.+|+..|.. .......+++=+=.-.+|+++.. .
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~ 123 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPV 123 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSS
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCc
Confidence 47777778889999875 3 21 1 222333332 36888876531 11112344444444578998752 2
Q ss_pred C-----cccC-ceEEEEE---CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCC---cceEEEEE----CCEEE
Q psy17309 590 N-----VERS-DASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRR---SGVSCIAY----HECIY 653 (824)
Q Consensus 590 p-----~~r~-~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~~----~~~iy 653 (824)
+ ..|. ...+++. .+.+|+.+. . ..+++=+-.-.+|+.+..++... .....+.+ .+.||
T Consensus 124 ~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-~-----~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 197 (763)
T 3a0f_A 124 PMGANDMGRNGGERLAVNPHWTDELWFGSR-T-----QGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAY 197 (763)
T ss_dssp CCCTTSTTTTSBCCEEECTTSTTCEEEECS-S-----SCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEE
T ss_pred ccCccccCccccceEEECCCCCCEEEEEeC-C-----CcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEE
Confidence 1 1232 1234443 367887542 1 23443333346899998766432 22333333 25688
Q ss_pred EEecCCCCCccceEEEEeCCCCCEEECCCCCC--------------------CCcceEEEEE-CCEEEEEccCCC---Cc
Q psy17309 654 VIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN--------------------PRSNFAIEVI-DDMIFAIGGFNG---VT 709 (824)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~--------------------~r~~~~~~~~-~~~i~v~GG~~~---~~ 709 (824)
+.....+ .+++-+-.-.+|+.+...|. +...+.++.. ++.+|+...... ..
T Consensus 198 ~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 272 (763)
T 3a0f_A 198 VASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGV 272 (763)
T ss_dssp EEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCC
T ss_pred EEEeCCC-----eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCC
Confidence 7654211 35555445678999875552 2222333322 678888742100 01
Q ss_pred eeeEEEEEECCCCcEEeccCCCC
Q psy17309 710 TIYHVECYDEKTDEWYEATDMNI 732 (824)
Q Consensus 710 ~~~~v~~yd~~~~~W~~~~~~p~ 732 (824)
....+++.+-...+|+.+.++|.
T Consensus 273 ~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 273 LYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp CCEEEEEEETTTTEEEECCTTSS
T ss_pred cceeEEEEeCCCCceEECCCCCC
Confidence 23468888888999999865554
No 353
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=58.83 E-value=1.7e+02 Score=30.21 Aligned_cols=100 Identities=8% Similarity=-0.100 Sum_probs=52.6
Q ss_pred eEEEEECCCCceEEeccCCCCcceEEEEEE-CCEEEEEecccC----CCCCCeEEEEeCCCCcEEeecCCC-ccc-----
Q psy17309 525 SCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QDVIYAMGGYNG----QRRQNSVEKYNYTENQWSLIAPMN-VER----- 593 (824)
Q Consensus 525 ~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~----~~~~~~~~~yd~~t~~W~~~~~~p-~~r----- 593 (824)
.+..||+.+++- +..++.....+-+..- +..+|+..-... ....+.+.+||+.+.+-..--+++ .+|
T Consensus 48 ~v~v~D~~t~~~--~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSI--LGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeE--EEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 789999988763 3444443333222222 457888752211 112467889999876532211222 111
Q ss_pred CceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEE
Q psy17309 594 SDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT 631 (824)
Q Consensus 594 ~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 631 (824)
.....+.. +..||+..-. ..+.+.++| .+++-.
T Consensus 126 ~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGGSSD 160 (373)
T ss_pred CccceEECCCCCEEEEEecC----CCCeEEEEE-CCCCEE
Confidence 11223332 4567776321 135788999 887644
No 354
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=57.71 E-value=51 Score=36.94 Aligned_cols=143 Identities=14% Similarity=0.105 Sum_probs=74.7
Q ss_pred EEEECCEEEEEecccCCCCCCeEEEEeCCCC-cEE--ee----cCCCcccCceEEEE-ECCEEEEEcccCCCCcCCceEE
Q psy17309 551 TAVHQDVIYAMGGYNGQRRQNSVEKYNYTEN-QWS--LI----APMNVERSDASATT-LQGKIYITGGFNGHNCLNSCEV 622 (824)
Q Consensus 551 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~--~~----~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~v~~ 622 (824)
++...+.+|+|-| +.+|+++.... ... .+ +.+|.. ...+... .++++|+|-| +..++
T Consensus 449 it~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~-IDAA~~~~~~~k~yFFkG-------~~yWr 513 (631)
T 1ck7_A 449 IAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG-------NEYWI 513 (631)
T ss_dssp EEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCSS-CSBCCEETTTTEEEEEET-------TEEEE
T ss_pred eEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCcc-ceEEEEECCCCEEEEEec-------CEEEE
Confidence 4556889999977 56788776542 111 11 233422 1212112 2688999976 46788
Q ss_pred EeCCCC---eEEEcCC--CCCCCcceEEEE---ECCEEEEEecCCCCCccceEEEEeCCCCCE-----EECCC--CCCCC
Q psy17309 623 YDPECN---QWTLIEP--MRHRRSGVSCIA---YHECIYVIGGFNGMSRMCNGEKYNPVTKTW-----SQVPD--MYNPR 687 (824)
Q Consensus 623 yd~~~~---~W~~~~~--~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-----~~~~~--~p~~r 687 (824)
|+..+- -=..+.. +|......-+|. .++++|+|-| +..++||..+++= +.+.. +..+.
T Consensus 514 y~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G~p~ 586 (631)
T 1ck7_A 514 YSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIPD 586 (631)
T ss_dssp EETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSSCCT
T ss_pred ECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCCCCC
Confidence 874210 0011211 222111122232 3689999988 5789999765421 11111 11122
Q ss_pred cceEEEEEC--CEEEEEccCCCCceeeEEEEEECCCC
Q psy17309 688 SNFAIEVID--DMIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 688 ~~~~~~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
.--++...+ +++|++-|. ..|.||..+.
T Consensus 587 ~iDAAf~~~~~g~~YFFkG~-------~Ywr~d~~~~ 616 (631)
T 1ck7_A 587 NLDAVVDLQGGGHSYFFKGA-------YYLKLENQSL 616 (631)
T ss_dssp TCCEEECCTTSCBCEEEETT-------EEECCBTTBT
T ss_pred CCcEeEEEcCCCeEEEEECC-------EEEEEeCccc
Confidence 223344433 789998664 5677876554
No 355
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=53.94 E-value=2.8e+02 Score=31.26 Aligned_cols=194 Identities=7% Similarity=-0.026 Sum_probs=87.7
Q ss_pred ceEEEEECCCCc---eEEeccC---CCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEe----CCCCcEEeecC---
Q psy17309 524 NSCRCFNAVTKV---WKEIAPM---NFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYN----YTENQWSLIAP--- 588 (824)
Q Consensus 524 ~~~~~yd~~~~~---W~~~~~~---~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd----~~t~~W~~~~~--- 588 (824)
..++.+|..+++ |..+... .........+.. ++++++.... .......++.+| +.+.++..+..
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~ 302 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQEHIE 302 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGGEEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEEeccc
Confidence 378889988765 2333221 011111122222 5666655321 122235688899 77776654431
Q ss_pred -CCcccCc-----eEEEEECCE-EEEE-cccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEecCC-
Q psy17309 589 -MNVERSD-----ASATTLQGK-IYIT-GGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFN- 659 (824)
Q Consensus 589 -~p~~r~~-----~~~~~~~~~-lyv~-GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~- 659 (824)
-...... .....-+|+ |++. ...++ ...++.+|..+.+...+..-....... ...-++.||..+...
T Consensus 303 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~~l~~~~~~~~~~~~lt~~~~~v~~~-~~~d~~~i~~~~~~~~ 378 (719)
T 1z68_A 303 ESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---YKHIHYIKDTVENAIQITSGKWEAINI-FRVTQDSLFYSSNEFE 378 (719)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS---CEEEEEESSCSTTCEECSCSSSCEEEE-EEECSSEEEEEESCGG
T ss_pred ccCCceEccccCCccEECCCCCeEEEEEEccCC---ceEEEEEECCCCceEecccCceEEEEE-EEEeCCEEEEEEecCC
Confidence 1111111 112222444 4443 32222 357889998887766655322111111 222344555555320
Q ss_pred CCCccceEEEEeCCCC--CEEECCC-CCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcE
Q psy17309 660 GMSRMCNGEKYNPVTK--TWSQVPD-MYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 724 (824)
Q Consensus 660 ~~~~~~~v~~yd~~~~--~W~~~~~-~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 724 (824)
.......++..+..+. +.+.+.. ++........+.+ +++.+++...+.. ...+++||..+++-
T Consensus 379 ~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~--~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 379 EYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPG--IPISTLHDGRTDQE 446 (719)
T ss_dssp GCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBS--SCEEEEECSSSCCE
T ss_pred CCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCC--CCeEEEEECCCCCE
Confidence 1112345777777544 3455542 3212222222333 3443333222221 12577888877653
No 356
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=53.45 E-value=3.1e+02 Score=31.66 Aligned_cols=242 Identities=10% Similarity=0.120 Sum_probs=122.0
Q ss_pred eEEEEECCCCcEEEcccCCCC---CCCceeEEEEE---CCEEEEEeecCCCcccceEEEEECCCCceEEeccC-C-----
Q psy17309 476 FVETYDTRADRWVKIDQVDPM---GPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM-N----- 543 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~---~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~----- 543 (824)
.++.-+-...+|.++.....+ ..+..+++++. .+.+|+..|.........+++=+-.-.+|+.+... +
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~ 117 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGAND 117 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTS
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccC
Confidence 366666777899985332111 12334455544 25688876642101114455555556789987531 1
Q ss_pred CCc-ceEEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCc---ccCceEEEEE----CCEEEEEcccC
Q psy17309 544 FKR-CYVSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNV---ERSDASATTL----QGKIYITGGFN 612 (824)
Q Consensus 544 ~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~---~r~~~~~~~~----~~~lyv~GG~~ 612 (824)
..| ..+.+++. .+.+|+ |... ..+++=+=.-.+|+.+..+|. .-.+.....+ .+.||+.....
T Consensus 118 ~~~~~~~~iav~p~~~~~v~~-g~~~-----~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 191 (789)
T 1sqj_A 118 MGRNNGERLAVNPFNSNEVWM-GTRT-----EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP 191 (789)
T ss_dssp TTTTSCCCEEEETTEEEEEEE-ECSS-----SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST
T ss_pred CCccceeEEEEcCCCCCEEEE-Eecc-----CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC
Confidence 112 12334443 346666 3311 235544434578999876542 1122333333 24677754321
Q ss_pred CCCcCCceEEEeCCCCeEEEcCCCCCCC----------------cceEEEEE--CCEEEEEecCCCC---CccceEEEEe
Q psy17309 613 GHNCLNSCEVYDPECNQWTLIEPMRHRR----------------SGVSCIAY--HECIYVIGGFNGM---SRMCNGEKYN 671 (824)
Q Consensus 613 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r----------------~~~~~~~~--~~~iyv~GG~~~~---~~~~~v~~yd 671 (824)
..+++=.-.-.+|+.+..+|... ..+.++.. ++.||+..+.... .....+++.+
T Consensus 192 -----~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~ 266 (789)
T 1sqj_A 192 -----QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQN 266 (789)
T ss_dssp -----TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEE
T ss_pred -----CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEe
Confidence 22333222245799987554322 11333332 7889988532110 1235688888
Q ss_pred CCCCCEEECCCCCCC---------Cc---ce-EEEEE---CCEEEEEccCCCCc-eeeEEEEEECCCCcEEecc
Q psy17309 672 PVTKTWSQVPDMYNP---------RS---NF-AIEVI---DDMIFAIGGFNGVT-TIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 672 ~~~~~W~~~~~~p~~---------r~---~~-~~~~~---~~~i~v~GG~~~~~-~~~~v~~yd~~~~~W~~~~ 728 (824)
-...+|+.+...|.. .. .. .+++. .+.||+.++..... ....+++=+-.-.+|+.+.
T Consensus 267 DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 267 RTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp TTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCSSCCCEEEESSTTSSEEEHH
T ss_pred CCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCcccccEEEecCCCCCceeCc
Confidence 888999999765431 12 22 33332 25677776432100 0123444444456888875
No 357
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=53.17 E-value=3e+02 Score=31.43 Aligned_cols=220 Identities=14% Similarity=0.131 Sum_probs=115.2
Q ss_pred eEEEEECCCCcEEEcccCCCCC---CCceeEEEEE---CCEEEEEeecCCC--cc-cceEEEEECCCCceEEeccC-CC-
Q psy17309 476 FVETYDTRADRWVKIDQVDPMG---PRAYHGTAVI---GYNIYVIGGFDGN--EY-YNSCRCFNAVTKVWKEIAPM-NF- 544 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~~~~---~r~~~~~~~~---~~~lyv~GG~~~~--~~-~~~~~~yd~~~~~W~~~~~~-~~- 544 (824)
.++..+-...+|..+....... .....++++. .+.||+..|.... .. ...+++=.-.-.+|+.+... +.
T Consensus 46 gv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~ 125 (737)
T 2cn3_A 46 GAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMG 125 (737)
T ss_dssp CEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCC
T ss_pred cEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccC
Confidence 4888888889999853211100 1112333333 3578887653111 01 13455544556789987532 10
Q ss_pred ----Cc-ceEEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCccc--------------CceEEEEEC
Q psy17309 545 ----KR-CYVSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVER--------------SDASATTLQ 602 (824)
Q Consensus 545 ----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r--------------~~~~~~~~~ 602 (824)
.+ ..+.+++. .+.||+... .+ ..+++=+=.-.+|+.+..+|..- .+.....++
T Consensus 126 ~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g----~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~d 200 (737)
T 2cn3_A 126 GNMPGRSMGERLAIDPNDNRILYLGTR-CG----NGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFD 200 (737)
T ss_dssp TTSTTTTSCCCEEECSSCTTCEEEECS-TT----CCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEEC
T ss_pred CCcCcccccceEEECCCCCCEEEEeec-cC----CcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcC
Confidence 12 12344442 256777431 10 23443333446899887665421 112223332
Q ss_pred ----------CEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecCCC----CCccceE
Q psy17309 603 ----------GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNG----MSRMCNG 667 (824)
Q Consensus 603 ----------~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~----~~~~~~v 667 (824)
+.||+.-+..+ ..+++=.-.-.+|+.+..+|.....+.++.. ++.+|+..+... ......+
T Consensus 201 p~~~~~~~~~~~v~~~~~~~~----~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v 276 (737)
T 2cn3_A 201 KSSSTPGNPTKTIYVGVADKN----ESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQV 276 (737)
T ss_dssp GGGSCTTSCCSCEEEEESCSS----CCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEE
T ss_pred CCCcccCCCCCEEEEEecCCC----ccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceE
Confidence 26776422111 1233322234579999877765443444433 788998765321 1124578
Q ss_pred EEEeCCCCCEEECCCCCCC----CcceEEEEE----CCEEEEEcc
Q psy17309 668 EKYNPVTKTWSQVPDMYNP----RSNFAIEVI----DDMIFAIGG 704 (824)
Q Consensus 668 ~~yd~~~~~W~~~~~~p~~----r~~~~~~~~----~~~i~v~GG 704 (824)
++++....+|+.+.+.|.. +..++..++ .+.||+.+.
T Consensus 277 ~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 277 WKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSM 321 (737)
T ss_dssp EEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEE
T ss_pred EEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEec
Confidence 9999999999999876542 344443444 367887764
No 358
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=53.12 E-value=3.1e+02 Score=31.46 Aligned_cols=253 Identities=8% Similarity=-0.073 Sum_probs=116.7
Q ss_pred CCEEEEEccCCCCCCCceEEEEECCCC-cEEEcccCCCCCCCceeEEEEE-CC-EEEEEeecCCCcccceEEEEECCCCc
Q psy17309 459 HEILFAIGGWSGGSPTDFVETYDTRAD-RWVKIDQVDPMGPRAYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAVTKV 535 (824)
Q Consensus 459 ~~~l~~~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~ 535 (824)
.+..+++.-...+.....++..|..++ +... . ..+....+.+.. ++ .|+... .+.......++..+..+..
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~--~---~~~~~~~~~~WspDg~~l~y~~-~d~~~~~~~v~~~~lgt~~ 258 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA--D---KVSGTNGEIVWGPDHTSLFYVT-KDETLRENKVWRHVMGKLQ 258 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCCCC--C---CEEEECSCCEECSSTTEEEEEE-ECTTCCEEEEEEEETTSCG
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEeCC--c---cccCceeeEEEecCCCEEEEEE-ECCCCCCCEEEEEECCCCc
Confidence 344444443333333456888888776 4210 0 001111112222 33 444432 2222222468888877653
Q ss_pred e--EEeccCCCCcceEEEEE-ECC-EEEEEecccCCCCCCeEEEEeCCCC--cE--EeecCCCcccCceEEE-EECCEEE
Q psy17309 536 W--KEIAPMNFKRCYVSTAV-HQD-VIYAMGGYNGQRRQNSVEKYNYTEN--QW--SLIAPMNVERSDASAT-TLQGKIY 606 (824)
Q Consensus 536 W--~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~t~--~W--~~~~~~p~~r~~~~~~-~~~~~ly 606 (824)
= ..+-.-+.......... -++ .|++.... . ..+.++.+|+.+. .+ +.+.+-... ..+... ..++.||
T Consensus 259 ~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~-~--~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 259 SEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQS-P--ETAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLV 334 (751)
T ss_dssp GGCEEEEECCCTTCEEEEEECTTSSEEEEEEEC-S--SCEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEE
T ss_pred hhcEEEEecCCCceEEEEEECCCCCEEEEEecC-C--CCceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEE
Confidence 1 11111112222222222 244 44444332 1 3568999998875 45 555332111 112222 2277888
Q ss_pred EEcccCCCCcCCceEEEeCCC-CeEEE-cCCCCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeC-------CCCC-
Q psy17309 607 ITGGFNGHNCLNSCEVYDPEC-NQWTL-IEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNP-------VTKT- 676 (824)
Q Consensus 607 v~GG~~~~~~~~~v~~yd~~~-~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~-------~~~~- 676 (824)
+..-.++ .....++.+|..+ ..|+. +-+-............++.|++..-.++ ...++++|+ .+..
T Consensus 335 ~~t~~~~-a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g---~~~l~~~dl~~~~~~~~~g~~ 410 (751)
T 2xe4_A 335 ILTNEGG-AVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG---LTRIWTMMADSQDGVFKAGTG 410 (751)
T ss_dssp EEECTTT-CTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT---EEEEEEEECCTTTSCCCTTTC
T ss_pred EEeCCCC-CCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC---EEEEEEEecccccccccCCcc
Confidence 8754431 1235788899876 67875 4221111122233445778877765332 357888986 3433
Q ss_pred EEECCCCCCCCcceEEE-----EEC-CEEEEEccCCCCceeeEEEEEECCCCcEEecc
Q psy17309 677 WSQVPDMYNPRSNFAIE-----VID-DMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 728 (824)
Q Consensus 677 W~~~~~~p~~r~~~~~~-----~~~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 728 (824)
-+.+. +|......+.. ..+ +.+++... + ...-..++.||..+++.+.+.
T Consensus 411 ~~~l~-l~~~~~~~~~~~~~~~~~~~~~l~~~~s-s-~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 411 LREVV-MEEPIFTVHLVESQMLEYEEPTFRMEYS-S-LATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp CEECC-CCCSSCEEEECGGGCCCTTCSCEEEEEE-E-TTEEEEEEEECTTTCCEEEEE
T ss_pred ceEEC-CCCceeEEEeccCcccCCCCCEEEEEEe-C-CCCCCEEEEEECCCCcEEEEe
Confidence 44442 23222111111 112 33333321 1 123346889999888776653
No 359
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=52.61 E-value=66 Score=36.09 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=76.0
Q ss_pred EEEEECCEEEEEeecCCCcccceEEEEECCCC-ceE--Eec----cCCCCcceEEEEE-ECCEEEEEecccCCCCCCeEE
Q psy17309 503 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK-VWK--EIA----PMNFKRCYVSTAV-HQDVIYAMGGYNGQRRQNSVE 574 (824)
Q Consensus 503 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~--~~~----~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 574 (824)
+++..++.+|+|=| +.+|+++.... ... .+. .+|. ....+... .++++|+|-| +.+|
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~-~IDAA~~~~~~~k~yFFkG-------~~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NEYW 512 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCS-SCSBCCEETTTTEEEEEET-------TEEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCc-cceEEEEECCCCEEEEEec-------CEEE
Confidence 45556888999987 56788776542 111 111 2222 11221111 2578999987 6789
Q ss_pred EEeCCCC--cE-EeecC--CCcccCceEEEE---ECCEEEEEcccCCCCcCCceEEEeCCCCeEE-----EcC-CC-CCC
Q psy17309 575 KYNYTEN--QW-SLIAP--MNVERSDASATT---LQGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LIE-PM-RHR 639 (824)
Q Consensus 575 ~yd~~t~--~W-~~~~~--~p~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~~-p~~ 639 (824)
+|+..+. -+ +.+.. +|......-+|. .++++|+|-| +..++||..+++-. .+. .. ..+
T Consensus 513 ry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G~p 585 (631)
T 1ck7_A 513 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIP 585 (631)
T ss_dssp EEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSSCC
T ss_pred EECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCCCC
Confidence 9985320 01 11111 222111122232 3689999977 56889997665321 111 11 112
Q ss_pred CcceEEEEEC--CEEEEEecCCCCCccceEEEEeCCCC
Q psy17309 640 RSGVSCIAYH--ECIYVIGGFNGMSRMCNGEKYNPVTK 675 (824)
Q Consensus 640 r~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~~~ 675 (824)
..--++...+ +++|++-| +..++||..+.
T Consensus 586 ~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~ 616 (631)
T 1ck7_A 586 DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSL 616 (631)
T ss_dssp TTCCEEECCTTSCBCEEEET-------TEEECCBTTBT
T ss_pred CCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccc
Confidence 2223334433 89999988 46777877544
No 360
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=52.01 E-value=9.7 Score=38.84 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=31.4
Q ss_pred ecCHhhHHHHHHHHhhcChHhHHHHHHHHHhhcCC
Q psy17309 271 HITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTT 305 (824)
Q Consensus 271 ~l~~~~v~~ll~~a~~~~i~~l~~~c~~~l~~~l~ 305 (824)
.++.+|+..++..|+.++++.|++.|.+||..++.
T Consensus 271 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 271 NLSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred cCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 35778999999999999999999999999998764
No 361
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=51.50 E-value=1.5e+02 Score=31.32 Aligned_cols=143 Identities=8% Similarity=0.015 Sum_probs=77.2
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEEEE-CC-EEEEEecccCCCCCCeEEEEeCCCCcEE-
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-QD-VIYAMGGYNGQRRQNSVEKYNYTENQWS- 584 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~- 584 (824)
++.||+.--. ..+.++|+.+++...+... ..+ -..+++. ++ .||+.....+ .....+..++... .|.
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~~-~~~-P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~g-~~~~ 218 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYSG-LSK-VRTICWTHEADSMIITNDQNN-NDRPNNYILTRES-GFKV 218 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEECC-CSC-EEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGGG-TSCS
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEecC-CCC-cceEEEeCCCCEEEEEeCCCC-cccceEEEEeCCC-ceee
Confidence 4778887531 6799999999888766541 111 2233332 34 5998864322 1223466666543 232
Q ss_pred --eecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEecC
Q psy17309 585 --LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGF 658 (824)
Q Consensus 585 --~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~ 658 (824)
.++.+. .-+++++. ++.||+.--. ...+++||+.+..-..+...+....-..++.. +++ ||+.--.
T Consensus 219 ~~~l~~~~---~p~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 219 ITELTKGQ---NCNGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp EEEEEECS---SCCCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred eeeeccCC---CceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 333222 23444443 6789987421 25799999987765343322221111123333 454 9998543
Q ss_pred CCCCccceEEEEeCC
Q psy17309 659 NGMSRMCNGEKYNPV 673 (824)
Q Consensus 659 ~~~~~~~~v~~yd~~ 673 (824)
.+.|+++++.
T Consensus 291 -----~~~I~~~~~d 300 (430)
T 3tc9_A 291 -----QHYILRSDYD 300 (430)
T ss_dssp -----TTEEEEEEEE
T ss_pred -----CCEEEEEeCC
Confidence 3567776654
No 362
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=46.95 E-value=2.5e+02 Score=28.56 Aligned_cols=213 Identities=11% Similarity=0.091 Sum_probs=104.2
Q ss_pred ceEEEEECCCCceEEeccCCC------Ccce-EEEEE----ECCEEEEEeccc------CC--CCCCeEEEEeCC---CC
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNF------KRCY-VSTAV----HQDVIYAMGGYN------GQ--RRQNSVEKYNYT---EN 581 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~------~r~~-~~~~~----~~~~iyv~GG~~------~~--~~~~~~~~yd~~---t~ 581 (824)
..+..+|+..+.-..+ ..+. +... .++.+ -+++|+++.-.. +. ...+.+.+||+. ++
T Consensus 35 g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg 113 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS 113 (334)
T ss_dssp TEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC
T ss_pred CEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC
Confidence 5788899986654444 2221 2222 34444 256888862210 11 124679999988 44
Q ss_pred --cEEe-ecCCCcc-------cCc-eEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCe---EEEcCCCCCCCcce-E
Q psy17309 582 --QWSL-IAPMNVE-------RSD-ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ---WTLIEPMRHRRSGV-S 644 (824)
Q Consensus 582 --~W~~-~~~~p~~-------r~~-~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~-~ 644 (824)
.|.. ++..... +.. ..-.++ +|.+||.+.... ..++++||.... |-.-.+.+..+.+. +
T Consensus 114 ~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nG 189 (334)
T 2p9w_A 114 KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM----PAIARVSADGKTVSTFAWESGNGGQRPGYSG 189 (334)
T ss_dssp CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS----CEEEEECTTSCCEEEEEECCCCSSSCCSCSE
T ss_pred CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC----CeEEEEeCCCCEEeeeeecCCCcccccCcce
Confidence 3542 2211111 222 222233 689999865431 468999997653 54323323334333 4
Q ss_pred EEEE-CC-EEEEEecCCCCCccceEEEEeCCCCCEEECCC-----CCCCCcceE--EEEECCEEEEEccCCCCceeeEEE
Q psy17309 645 CIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD-----MYNPRSNFA--IEVIDDMIFAIGGFNGVTTIYHVE 715 (824)
Q Consensus 645 ~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-----~p~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~v~ 715 (824)
++.. ++ .|++..+ ...+++||+.+.....++. .......-+ ..-.+|+++++.-.. +.++
T Consensus 190 Iv~~pdg~~Liv~~~------~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~-----~~~~ 258 (334)
T 2p9w_A 190 ITFDPHSNKLIAFGG------PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA-----PYAI 258 (334)
T ss_dssp EEEETTTTEEEEESS------SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET-----TEEE
T ss_pred EEEeCCCCEEEEEcC------CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCC-----CCEE
Confidence 5555 34 5666544 2568899987533211110 000011112 223589986664321 1234
Q ss_pred EEECCCCcEEec---cCCCCC--ccceeEE-E----EcCccceecccc
Q psy17309 716 CYDEKTDEWYEA---TDMNIY--RSALSAC-V----IMGLPNVYDYIH 753 (824)
Q Consensus 716 ~yd~~~~~W~~~---~~~p~~--r~~~~~~-~----~~~~~~~~~~~~ 753 (824)
++-...+ |+.. +..|.+ -.+.+++ + .++++|+....+
T Consensus 259 ~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 259 SFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp EEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCG
T ss_pred EEECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeec
Confidence 4433444 9765 233332 1233333 3 467788874333
No 363
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=46.94 E-value=45 Score=29.18 Aligned_cols=44 Identities=16% Similarity=0.055 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q psy17309 292 AQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFV 337 (824)
Q Consensus 292 l~~~c~~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~ 337 (824)
+.+.-.+|+ .++.+++++++..|..+++..|.+.|.++++....
T Consensus 79 i~~wD~~F~--~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 79 IPVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp --HHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHH--hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc
Confidence 334445566 38999999999999999999999999999987753
No 364
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=44.54 E-value=3.8e+02 Score=29.99 Aligned_cols=196 Identities=7% Similarity=-0.027 Sum_probs=111.9
Q ss_pred ceEEEEECCCCceEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEE-
Q psy17309 524 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT- 600 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~- 600 (824)
.++.+.|+.+..-..+.+++.-+...++++. ++.||+.-- ....++++++.....+.+...... .-.++++
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~-----~~~~I~r~~~~g~~~~~v~~~g~~-~P~GlAvD 88 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI-----SLKTISRAFMNGSALEHVVEFGLD-YPEGMAVD 88 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCS-CCCEEEEE
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC-----CCCeEEEEECCCCCcEEEEeCCCC-CcceEEEE
Confidence 5678888877654443333333344555554 689999854 236789999887666554332211 1223444
Q ss_pred -ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEc--CCCCCCCcceEEEEE--CCEEEEEe-cCCCCCccceEEEEeCCC
Q psy17309 601 -LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLI--EPMRHRRSGVSCIAY--HECIYVIG-GFNGMSRMCNGEKYNPVT 674 (824)
Q Consensus 601 -~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~--~~~iyv~G-G~~~~~~~~~v~~yd~~~ 674 (824)
.+++||+.-.. ...+++++++...=+.+ ..+..| .+.++. +|.||+.- |. ...|++.++..
T Consensus 89 ~~~~~LY~tD~~-----~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g~-----~~~I~r~~~dG 155 (628)
T 4a0p_A 89 WLGKNLYWADTG-----TNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWGG-----KPKIDRAAMDG 155 (628)
T ss_dssp TTTTEEEEEETT-----TTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECSS-----SCEEEEEETTS
T ss_pred eCCCEEEEEECC-----CCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCCC-----CCEEEEEeCCC
Confidence 47899997432 36789999865432332 233333 234443 68999985 31 35899999876
Q ss_pred CCEEECC-CCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEec-cCCCCCccceeEEEEcCcccee
Q psy17309 675 KTWSQVP-DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA-TDMNIYRSALSACVIMGLPNVY 749 (824)
Q Consensus 675 ~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~~~~~ 749 (824)
..-+.+. .+..| .+++.- +++||+.-.. .+.|+.+|++...=+.+ ..++.| ++.++.++.+|+-
T Consensus 156 ~~~~~l~~~~~~P---~GlalD~~~~~LY~aD~~-----~~~I~~~d~dG~~~~v~~~~l~~P---~glav~~~~ly~t 223 (628)
T 4a0p_A 156 SERTTLVPNVGRA---NGLTIDYAKRRLYWTDLD-----TNLIESSNMLGLNREVIADDLPHP---FGLTQYQDYIYWT 223 (628)
T ss_dssp CSCEEEECSCSSE---EEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECCSCE---EEEEEETTEEEEE
T ss_pred CceEEEECCCCCc---ceEEEccccCEEEEEECC-----CCEEEEEcCCCCceEEeeccCCCc---eEEEEECCEEEEe
Confidence 6544432 22211 223322 6899998542 23788898865322333 223322 4566667777765
No 365
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=44.05 E-value=2.6e+02 Score=28.05 Aligned_cols=227 Identities=7% Similarity=-0.043 Sum_probs=0.0
Q ss_pred eEEEEE-CCEEEEEeecCCCcccceEEEEECCCCceEEeccC------CCCcceEEEEEECCEEEEEecccCCCCCCeEE
Q psy17309 502 HGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM------NFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVE 574 (824)
Q Consensus 502 ~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~------~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 574 (824)
.++++. ++++|+......... ..++.++ +.+-...+.. ......-..+--++.||+..-.........+.
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred ceEEECCCCCEEEEeCCCCCCc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Q ss_pred EEeCCCCcEEeecCCCcc-----cCceEEEEE--CCEEEEEcc---cCCCCcCCceEEEeCC-CCeEEEcCC--------
Q psy17309 575 KYNYTENQWSLIAPMNVE-----RSDASATTL--QGKIYITGG---FNGHNCLNSCEVYDPE-CNQWTLIEP-------- 635 (824)
Q Consensus 575 ~yd~~t~~W~~~~~~p~~-----r~~~~~~~~--~~~lyv~GG---~~~~~~~~~v~~yd~~-~~~W~~~~~-------- 635 (824)
+||+.+++-...-.++.. ..-..+++- ++.+|+..- .. ..+.+||+. ...|..+..
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~-----~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK-----AALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG-----CEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC-----CeEEEEECCCCCEEEEecCCCcccccc
Q ss_pred ---------------------CCCCCcceEEEEECCEEEEEecCCCCCccceEEEEeCC------------CCCEEECCC
Q psy17309 636 ---------------------MRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPV------------TKTWSQVPD 682 (824)
Q Consensus 636 ---------------------~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~------------~~~W~~~~~ 682 (824)
....-.+.+...-+..||+.--.. ..+++++.. .........
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS-----TSMYRIKSADLSNLQLTDAELGSKIERYSE 246 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC-----SEEEEEEHHHHTCTTCCHHHHHTTCEEEEE
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC-----CeEEEEEHHHhcCCCCChhhhhcceEeccc
Q ss_pred CCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCcEEeccCCCCCccceeEEE-EcCccce
Q psy17309 683 MYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACV-IMGLPNV 748 (824)
Q Consensus 683 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~~~~ 748 (824)
.+ ....-++--++.||+..-.++ .|.+||+++.+...+...|....-.++++ -++.+|+
T Consensus 247 ~g--~pdgia~d~~G~l~va~~~~~-----~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v 306 (343)
T 2qe8_A 247 KP--ICDGISIDKDHNIYVGDLAHS-----AIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYF 306 (343)
T ss_dssp CC--SCSCEEECTTCCEEEEEGGGT-----EEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEE
T ss_pred CC--CCceEEECCCCCEEEEccCCC-----eEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEE
No 366
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=43.73 E-value=1.1e+02 Score=32.36 Aligned_cols=143 Identities=10% Similarity=0.036 Sum_probs=75.4
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE-C-CEEEEEcccCCCCcCCceEEEeCCCCeEE-
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-Q-GKIYITGGFNGHNCLNSCEVYDPECNQWT- 631 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~- 631 (824)
++.||+.--. ..+.++|+.++..+.+.. .......+++- + +.||+....++ .....+..++... .|.
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~g-~~~~ 218 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILTRES-GFKV 218 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGGG-TSCS
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEeCCC-ceee
Confidence 5789988431 679999999988877644 11111222222 3 45999864332 1123456666543 232
Q ss_pred --EcCCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE-CC-EEEEEccC
Q psy17309 632 --LIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DD-MIFAIGGF 705 (824)
Q Consensus 632 --~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~ 705 (824)
.+..+..+ +++++. ++.||+.--. ...|++||+.+..-..+...+....-..++.. ++ .||+.--.
T Consensus 219 ~~~l~~~~~p---~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 219 ITELTKGQNC---NGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp EEEEEECSSC---CCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred eeeeccCCCc---eEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 33323222 233433 6889987532 25799999987654333222211111223332 44 58988432
Q ss_pred CCCceeeEEEEEECC
Q psy17309 706 NGVTTIYHVECYDEK 720 (824)
Q Consensus 706 ~~~~~~~~v~~yd~~ 720 (824)
+ +.|+++|++
T Consensus 291 ~-----~~I~~~~~d 300 (430)
T 3tc9_A 291 Q-----HYILRSDYD 300 (430)
T ss_dssp T-----TEEEEEEEE
T ss_pred C-----CEEEEEeCC
Confidence 2 256665544
No 367
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=42.26 E-value=1.3e+02 Score=29.83 Aligned_cols=133 Identities=11% Similarity=0.016 Sum_probs=60.2
Q ss_pred ceeEEEEECCEEEEEeecCCCcccceEEEEECC--CCceEEeccCCCCcceEEEEEECCEEEEEecccCCCCCCeEEEEe
Q psy17309 500 AYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAV--TKVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQRRQNSVEKYN 577 (824)
Q Consensus 500 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 577 (824)
..|+++.-++.+|.+|--...+. .. |. ......+. .. ..|+++..++.||..|-.... .+.. -.
T Consensus 72 ~~hs~~l~~G~v~~wG~n~~Gql-g~-----P~~~~~~v~~ia---~G-~~hs~al~~G~v~~wG~n~~g-qlg~---~~ 137 (282)
T 3qhy_B 72 NYHSLALKDGEVIAWGGNEDGQT-TV-----PAEARSGVDAIA---AG-AWASYALKDGKVIAWGDDSDG-QTTV---PA 137 (282)
T ss_dssp SSEEEEEETTEEEEEECCTTSTT-CC-----CGGGSSSEEEEE---EE-TTEEEEEETTEEEEEECCTTS-TTSC---CG
T ss_pred CCEEEEEECCEEEEeeCCCCCCC-CC-----CcccCCCeEEEE---Cc-CCEEEEEeCCeEEEecCCCCC-cCCC---Cc
Confidence 34566666899999985322111 00 10 01111111 12 234443339999999853211 1110 00
Q ss_pred CCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEECCEEEEEec
Q psy17309 578 YTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGG 657 (824)
Q Consensus 578 ~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 657 (824)
+.......+ ..-..|+++.-++++|..|-......-... ........+. .-..|+++.-++++|..|-
T Consensus 138 ~~~~~i~~i----~~G~~~~~~l~~G~v~~wG~n~~gqlg~p~----~~~~~v~~i~----~G~~hs~al~~G~v~~wG~ 205 (282)
T 3qhy_B 138 EAQSGVTAL----DGGVYTALAVKNGGVIAWGDNYFGQTTVPA----EAQSGVDDVA----GGIFHSLALKDGKVIAWGD 205 (282)
T ss_dssp GGGSSEEEE----EECSSEEEEEETTEEEEEECCTTSTTSCCG----GGGSSEEEEE----ECSSEEEEEETTEEEEEEC
T ss_pred cCCCCeEEE----EcccCEEEEEECCEEEEecCCCCCCCCCce----ecCCCeEEEE----ecCCEEEEEECCeEEEEEC
Confidence 001111111 122346666669999999865322110000 0011222222 1234555557899999985
Q ss_pred C
Q psy17309 658 F 658 (824)
Q Consensus 658 ~ 658 (824)
.
T Consensus 206 n 206 (282)
T 3qhy_B 206 N 206 (282)
T ss_dssp C
T ss_pred C
Confidence 3
No 368
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=42.00 E-value=3.7 Score=35.37 Aligned_cols=79 Identities=14% Similarity=0.101 Sum_probs=51.6
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceec----CHhhHHHHHHHHhhcChHhHHHHHHH
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHI----TEDNVASLLLATDFFCMSKAQDLCCD 298 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l----~~~~v~~ll~~a~~~~i~~l~~~c~~ 298 (824)
+..+.+|+.++.+.+++|.........- +..+.+ +.+.+. ...+
T Consensus 38 ~~~~~aHk~vLaa~S~yF~~mf~~~~~e----------------~~~i~l~~~v~~~~f~----------------~lL~ 85 (124)
T 2ihc_A 38 GQRFRAHRSVLAACSSYFHSRIVGQADG----------------ELNITLPEEVTVKGFE----------------PLIQ 85 (124)
T ss_dssp TEEEEECHHHHHHHBHHHHHHHTTC-------------------CEEEECCTTSCHHHHH----------------HHHH
T ss_pred CEEEecHHHHHHHcCHHHHHHHcCCCCC----------------CceEeecCCcCHHHHH----------------HHHH
Confidence 4578889988888888887644322110 122333 222222 2334
Q ss_pred HHhh---cCCcchHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy17309 299 FIKR---LTTPRNCFGILLFSRDHFCKKLEEWTRKYIL 333 (824)
Q Consensus 299 ~l~~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~ 333 (824)
|+-. .++.+|+..++.+|+.++++.|.+.|.+|+.
T Consensus 86 ~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 86 FAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 5533 4678999999999999999999999988763
No 369
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=41.02 E-value=4.2e+02 Score=29.56 Aligned_cols=211 Identities=10% Similarity=0.046 Sum_probs=119.9
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCceeEEEEE--CCEEEEEeecCCCcccceEEEEECCCCceEEeccCCCCcceEEEE
Q psy17309 475 DFVETYDTRADRWVKIDQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 552 (824)
Q Consensus 475 ~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 552 (824)
..|...|..+..-.. ..+.+..+...++++. ++.||+.--. ...++++++.......+...... .-.++|
T Consensus 15 ~~I~~i~l~~~~~~~--~~~~~~~~~~~~l~~d~~~~~lywtD~~-----~~~I~r~~~~g~~~~~v~~~g~~-~P~GlA 86 (628)
T 4a0p_A 15 ADIRRISLETNNNNV--AIPLTGVKEASALDFDVTDNRIYWTDIS-----LKTISRAFMNGSALEHVVEFGLD-YPEGMA 86 (628)
T ss_dssp TEEEEEESSCTTCEE--ECCCCSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS-CCCEEE
T ss_pred CcEEEEECCCCCcce--EEEcCCCCceEEEEEECCCCEEEEEECC-----CCeEEEEECCCCCcEEEEeCCCC-CcceEE
Confidence 456677766544222 1222223344556655 6899988542 35788999887666554432211 112444
Q ss_pred E--ECCEEEEEecccCCCCCCeEEEEeCCCCcEEee--cCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCC
Q psy17309 553 V--HQDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI--APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPE 626 (824)
Q Consensus 553 ~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~--~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~ 626 (824)
+ .++.||+.-. ..+.++++++....=+.+ ..+..|+ ++++- +|.||+.-- .....+++.+++
T Consensus 87 vD~~~~~LY~tD~-----~~~~I~v~~~dG~~~~~l~~~~l~~P~---~iavdp~~G~lY~tD~----g~~~~I~r~~~d 154 (628)
T 4a0p_A 87 VDWLGKNLYWADT-----GTNRIEVSKLDGQHRQVLVWKDLDSPR---ALALDPAEGFMYWTEW----GGKPKIDRAAMD 154 (628)
T ss_dssp EETTTTEEEEEET-----TTTEEEEEETTSTTCEEEECSSCCCEE---EEEEETTTTEEEEEEC----SSSCEEEEEETT
T ss_pred EEeCCCEEEEEEC-----CCCEEEEEecCCCcEEEEEeCCCCCcc---cEEEccCCCeEEEeCC----CCCCEEEEEeCC
Confidence 4 4789999743 236899999876543333 2333332 34443 689999741 113578999887
Q ss_pred CCeEEEcCCCCCCCcceEEEEE---CCEEEEEecCCCCCccceEEEEeCCCCCEEECC-CCCCCCcceEEEEECCEEEEE
Q psy17309 627 CNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP-DMYNPRSNFAIEVIDDMIFAI 702 (824)
Q Consensus 627 ~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~ 702 (824)
...-+.+.. ....+....+ +++||+.-.. .+.|+++|+....=+.+. .++ .-.++++.+++||+.
T Consensus 155 G~~~~~l~~---~~~~P~GlalD~~~~~LY~aD~~-----~~~I~~~d~dG~~~~v~~~~l~---~P~glav~~~~ly~t 223 (628)
T 4a0p_A 155 GSERTTLVP---NVGRANGLTIDYAKRRLYWTDLD-----TNLIESSNMLGLNREVIADDLP---HPFGLTQYQDYIYWT 223 (628)
T ss_dssp SCSCEEEEC---SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECCS---CEEEEEEETTEEEEE
T ss_pred CCceEEEEC---CCCCcceEEEccccCEEEEEECC-----CCEEEEEcCCCCceEEeeccCC---CceEEEEECCEEEEe
Confidence 665444432 1222333333 5899998643 467899998653223222 233 235777788999998
Q ss_pred ccCCCCceeeEEEEEECCC
Q psy17309 703 GGFNGVTTIYHVECYDEKT 721 (824)
Q Consensus 703 GG~~~~~~~~~v~~yd~~~ 721 (824)
--.+ ..|+++|..+
T Consensus 224 D~~~-----~~I~~~dk~t 237 (628)
T 4a0p_A 224 DWSR-----RSIERANKTS 237 (628)
T ss_dssp ETTT-----TEEEEEETTT
T ss_pred cCCC-----CEEEEEECCC
Confidence 5321 2456666443
No 370
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=39.81 E-value=3.7e+02 Score=28.61 Aligned_cols=116 Identities=8% Similarity=-0.065 Sum_probs=58.3
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCC----ceEEec-------cCCCCcceEEEEEECCEEEEEe-cccCCCCCCeEEE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTK----VWKEIA-------PMNFKRCYVSTAVHQDVIYAMG-GYNGQRRQNSVEK 575 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~----~W~~~~-------~~~~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~ 575 (824)
+.++|+-|.. .+.++++|..++ +-.+.- .....+-++..+.-++ |||.. |.........+..
T Consensus 95 r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 95 RRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp SCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEE
T ss_pred CCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEE
Confidence 5677777653 377999998876 332221 1111232233344456 77742 2212233578999
Q ss_pred EeCCCCcEEeecCCC-c-ccCceEEEEE--CCEEEEEc---------ccCCC----CcCCceEEEeCCCCe
Q psy17309 576 YNYTENQWSLIAPMN-V-ERSDASATTL--QGKIYITG---------GFNGH----NCLNSCEVYDPECNQ 629 (824)
Q Consensus 576 yd~~t~~W~~~~~~p-~-~r~~~~~~~~--~~~lyv~G---------G~~~~----~~~~~v~~yd~~~~~ 629 (824)
+|..|.+-..--+.+ . .-..+..... .+.+|+.- |++.. ...+.+.+||..+.+
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred EECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 999987632211111 1 1111112222 33444431 22221 346889999998763
No 371
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=39.68 E-value=3.6e+02 Score=28.32 Aligned_cols=115 Identities=13% Similarity=0.055 Sum_probs=56.5
Q ss_pred CEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEc
Q psy17309 556 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI 633 (824)
Q Consensus 556 ~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 633 (824)
+.+++.|+.+ ..+.+||..+..-. ....+. .....++.. +++.++.|+.+ ..+..||+....-..+
T Consensus 162 ~~~las~s~D-----g~v~iwD~~~~~~~-~~~~~~-~~~v~~v~wspdg~~lasgs~d-----g~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 162 PSMVAVCLAD-----GSIAVLQVTETVKV-CATLPS-TVAVTSVCWSPKGKQLAVGKQN-----GTVVQYLPTLQEKKVI 229 (434)
T ss_dssp TTEEEEEETT-----SCEEEEEESSSEEE-EEEECG-GGCEEEEEECTTSSCEEEEETT-----SCEEEECTTCCEEEEE
T ss_pred CCEEEEEECC-----CeEEEEEcCCCcce-eeccCC-CCceeEEEEcCCCCEEEEEcCC-----CcEEEEccCCcccccc
Confidence 5677777754 45888888876321 111111 112222222 67777777755 4688899873332333
Q ss_pred CCCCCCC-----cceEEEEECCEEEEEec--CCCC-CccceEEEEeCCCC------CEEECCC
Q psy17309 634 EPMRHRR-----SGVSCIAYHECIYVIGG--FNGM-SRMCNGEKYNPVTK------TWSQVPD 682 (824)
Q Consensus 634 ~~~p~~r-----~~~~~~~~~~~iyv~GG--~~~~-~~~~~v~~yd~~~~------~W~~~~~ 682 (824)
....... ...+.....+..|+++- .++. .....+.+||.... .|+....
T Consensus 230 ~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~ 292 (434)
T 2oit_A 230 PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFME 292 (434)
T ss_dssp CCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCC
T ss_pred cCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEeccc
Confidence 2111111 11222333455555332 1211 22356888887543 4666543
No 372
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=38.96 E-value=3.4e+02 Score=27.90 Aligned_cols=84 Identities=11% Similarity=0.042 Sum_probs=47.7
Q ss_pred CCEEEEEec-C-C-CCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEE-CC-EEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 649 HECIYVIGG-F-N-GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 649 ~~~iyv~GG-~-~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
++++|+.-. . . .....+.+.++|+.+.+ .+..++.+...++++.- ++ ++|+..+.. .+++-++|..+
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~----~~~VsVID~~t-- 346 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQ--TSGPISNGHDSDAIIAAQDGASDNYANSAG----TEVLDIYDAAS-- 346 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSCC--EEECCEEEEEECEEEECCSSSCEEEEEETT----TTEEEEEESSS--
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCCe--EEEEEECCCCcceEEECCCCCEEEEEccCC----CCeEEEEECCC--
Confidence 578998532 1 1 00001345599988765 34455554444455444 44 477776521 13789999776
Q ss_pred EEeccCCCCCccceeEE
Q psy17309 724 WYEATDMNIYRSALSAC 740 (824)
Q Consensus 724 W~~~~~~p~~r~~~~~~ 740 (824)
|+.+..++..+.-++.+
T Consensus 347 ~kvv~~I~vg~~P~~i~ 363 (368)
T 1mda_H 347 DQDQSSVELDKGPESLS 363 (368)
T ss_dssp CEEEEECCCCSCCCEEE
T ss_pred CcEEEEEECCCCCCEEE
Confidence 66766777666655543
No 373
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=38.84 E-value=3.1e+02 Score=27.39 Aligned_cols=184 Identities=12% Similarity=0.005 Sum_probs=103.3
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCc---eEEeccCCCCcceEEEEE--ECCEEEEEecccCCCCCCeEEEEeCCCCc
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKV---WKEIAPMNFKRCYVSTAV--HQDVIYAMGGYNGQRRQNSVEKYNYTENQ 582 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 582 (824)
++.||+.-- ....++++++.... +.....+..| .++++ .++.||+.-. ..+.++++++....
T Consensus 46 ~~~lyw~D~-----~~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~d~-----~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 46 HGLIYWSDV-----SEEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWTDS-----ETNRIEVSNLDGSL 112 (318)
T ss_dssp GTEEEEEET-----TTTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEEET-----TTTEEEEEETTSCS
T ss_pred CCEEEEEEC-----CCCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEEEC-----CCCEEEEEECCCCc
Confidence 578888753 23578899987652 2222222222 23444 4789999743 23678999987654
Q ss_pred EEee--cCCCcccCceEEEEE--CCEEEEEcccCCCCcCCceEEEeCCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEe
Q psy17309 583 WSLI--APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIG 656 (824)
Q Consensus 583 W~~~--~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 656 (824)
-+.+ ..+..|+ ++++- ++.||+.-- .....+++++++...-+.+..-.. ..-.+.+.- +++||+.-
T Consensus 113 ~~~l~~~~~~~P~---giavdp~~g~ly~td~----~~~~~I~r~~~dG~~~~~~~~~~l-~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 113 RKVLFWQELDQPR---AIALDPSSGFMYWTDW----GEVPKIERAGMDGSSRFIIINSEI-YWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp CEEEECSSCSSEE---EEEEEGGGTEEEEEEC----SSSCEEEEEETTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCCcc---EEEEeCCCCEEEEEec----CCCCEEEEEEcCCCCeEEEEECCC-CCccEEEEeccCCEEEEEE
Confidence 3333 2233332 33332 689998741 113578999987543233211111 111233333 68999986
Q ss_pred cCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEEECCEEEEEccCCCCceeeEEEEEECCCCc
Q psy17309 657 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 723 (824)
Q Consensus 657 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 723 (824)
.. ...|+++|+....-+.+... ....-.++++.++.+|+.--. ...|.++|+.+.+
T Consensus 185 ~~-----~~~I~~~d~dG~~~~~~~~~-~~~~P~glav~~~~lywtd~~-----~~~V~~~~~~~G~ 240 (318)
T 3sov_A 185 AK-----LNFIHKSNLDGTNRQAVVKG-SLPHPFALTLFEDILYWTDWS-----THSILACNKYTGE 240 (318)
T ss_dssp TT-----TTEEEEEETTSCSCEEEECS-CCSCEEEEEEETTEEEEEETT-----TTEEEEEETTTCC
T ss_pred CC-----CCEEEEEcCCCCceEEEecC-CCCCceEEEEeCCEEEEEecC-----CCeEEEEECCCCC
Confidence 43 46899999875433333211 112235667778999998322 2378999986654
No 374
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=36.79 E-value=55 Score=29.34 Aligned_cols=50 Identities=18% Similarity=0.203 Sum_probs=30.3
Q ss_pred HHHhhcCCcchHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHcCchhhhcCCHHHHHHHhc
Q psy17309 298 DFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIIS 359 (824)
Q Consensus 298 ~~l~~~l~~~N~~~i~~~a~~~~~~~L~~~~~~~i~~~f~~v~~~~~~f~~L~~~~l~~ll~ 359 (824)
+|+. ++.++++.|+..|..+++..|.+.|.++++.... .-+.+++.+++.
T Consensus 89 ~Fl~--vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik----------gkt~eeir~~f~ 138 (160)
T 2p1m_A 89 DFMK--IDQATLFELILAANYLNIKNLLDLTCQTVADMIK----------GKTPEEIRTTFN 138 (160)
T ss_dssp --------------CHHHHHHTTCHHHHHHHHHHHHHTTT----------TCCHHHHHHHTT
T ss_pred HHHc--CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----------CCCHHHHHHHcC
Confidence 3453 8899999999999999999999999999876642 235667777653
No 375
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=36.31 E-value=3.4e+02 Score=27.10 Aligned_cols=193 Identities=7% Similarity=0.034 Sum_probs=102.8
Q ss_pred ceEEEEECCCCc--eEEeccCCCCcceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCc---EEeecCCCcccCce
Q psy17309 524 NSCRCFNAVTKV--WKEIAPMNFKRCYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAPMNVERSDA 596 (824)
Q Consensus 524 ~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~---W~~~~~~p~~r~~~ 596 (824)
.++.++|+.... -..+. +......++... ++.||+.-- ....++++++.... +.....+..+ .
T Consensus 13 ~~I~~i~l~~~~~~~~~~~--~~~~~~~~ld~d~~~~~lyw~D~-----~~~~I~r~~~~g~~~~~~~~~~~l~~p---~ 82 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVV--GGLEDAAAVDFVFSHGLIYWSDV-----SEEAIKRTEFNKTESVQNVVVSGLLSP---D 82 (318)
T ss_dssp EEEEEEETTCTTSCCEEEE--EEEEEEEEEEEEGGGTEEEEEET-----TTTEEEEEETTSSSCCCEEEEECCSCC---C
T ss_pred CeEEEEECCCCceEEEEEe--cCCCccEEEEEEeCCCEEEEEEC-----CCCcEEEEEccCCCceEEEEcCCCCCc---c
Confidence 567888887653 21111 111222333333 579999843 23678999987652 2222222222 2
Q ss_pred EEEE--ECCEEEEEcccCCCCcCCceEEEeCCCCeEEEc--CCCCCCCcceEEEEE--CCEEEEEecCCCCCccceEEEE
Q psy17309 597 SATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLI--EPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKY 670 (824)
Q Consensus 597 ~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~y 670 (824)
++++ .++.||+.-.. ...+++++++...-+.+ ..+..| .+.++. ++.||+.--. ....|+++
T Consensus 83 glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~----~~~~I~r~ 150 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSE-----TNRIEVSNLDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG----EVPKIERA 150 (318)
T ss_dssp EEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS----SSCEEEEE
T ss_pred EEEEEcCCCeEEEEECC-----CCEEEEEECCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC----CCCEEEEE
Confidence 3443 37899997432 35788999876543333 222222 233332 5889987521 13579999
Q ss_pred eCCCCCEEEC-C-CCCCCCcceEEEEE--CCEEEEEccCCCCceeeEEEEEECCCCcEEecc--CCCCCccceeEEEEcC
Q psy17309 671 NPVTKTWSQV-P-DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT--DMNIYRSALSACVIMG 744 (824)
Q Consensus 671 d~~~~~W~~~-~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~ 744 (824)
++....=+.+ . .+.. -.+++.- +++||+.-.. ...|+++|++...-+.+. .+..| .+.++..+
T Consensus 151 ~~dG~~~~~~~~~~l~~---Pnglavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~P---~glav~~~ 219 (318)
T 3sov_A 151 GMDGSSRFIIINSEIYW---PNGLTLDYEEQKLYWADAK-----LNFIHKSNLDGTNRQAVVKGSLPHP---FALTLFED 219 (318)
T ss_dssp ETTSCSCEEEECSSCSC---EEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSCCSCE---EEEEEETT
T ss_pred EcCCCCeEEEEECCCCC---ccEEEEeccCCEEEEEECC-----CCEEEEEcCCCCceEEEecCCCCCc---eEEEEeCC
Confidence 9875432222 1 2211 1234433 7899998532 347899998754433332 22222 45556666
Q ss_pred cccee
Q psy17309 745 LPNVY 749 (824)
Q Consensus 745 ~~~~~ 749 (824)
.+|+-
T Consensus 220 ~lywt 224 (318)
T 3sov_A 220 ILYWT 224 (318)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66665
No 376
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=35.35 E-value=6e+02 Score=29.72 Aligned_cols=187 Identities=11% Similarity=-0.050 Sum_probs=94.3
Q ss_pred CEEEEEccCCCCCCCceEEEEECCCCcEEEcccCCCCCCCceeEEEEECCEEEEEeecCCCcccceEEEEECCCCceEEe
Q psy17309 460 EILFAIGGWSGGSPTDFVETYDTRADRWVKIDQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 539 (824)
Q Consensus 460 ~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 539 (824)
+.+++.|+.+ ..+..||..+.+-... . .....-.+++...+..++.|+.+ ..+..||..+.+-...
T Consensus 29 g~~lAsgs~D-----g~I~lw~~~~~~~~~~--~--~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 29 QNLLAIATVT-----GEVHIYGQQQVEVVIK--L--EDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTT 94 (902)
T ss_dssp TTEEEEEETT-----SEEEEECSTTCEEEEE--C--SSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEE
T ss_pred CCEEEEEeCC-----CEEEEEeCCCcEEEEE--c--CCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEE
Confidence 4466666643 4677888766554321 1 11112233444445555555533 5688999988754321
Q ss_pred ccCCCCcceEEEEEE-CCEEEEEecccCCCCCCeEEEEeCCCCcEEee--c------CCCccc--CceEEEEEC--CEEE
Q psy17309 540 APMNFKRCYVSTAVH-QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI--A------PMNVER--SDASATTLQ--GKIY 606 (824)
Q Consensus 540 ~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~--~------~~p~~r--~~~~~~~~~--~~ly 606 (824)
-..+ ..-.+++.. ++...+.|+.+ ..+..||..+..-... + ..+... .-.+++... +.++
T Consensus 95 ~~~~--~~V~~v~~sp~g~~l~sgs~d-----g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 95 VFVP--GKITSIDTDASLDWMLIGLQN-----GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp EECS--SCEEEEECCTTCSEEEEEETT-----SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred EcCC--CCEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 1111 111122222 55666667643 4588899887764311 0 011111 111233332 3566
Q ss_pred EEcccCCCCcCCceEEEeCCCCeEEEcCCCC------C---------C-CcceEEEEE--CCEEEEEecCCCCCccceEE
Q psy17309 607 ITGGFNGHNCLNSCEVYDPECNQWTLIEPMR------H---------R-RSGVSCIAY--HECIYVIGGFNGMSRMCNGE 668 (824)
Q Consensus 607 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p------~---------~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 668 (824)
+.|+.+ ..+ .||..+.+-...-... . . ......+.+ ++..++.|+.+ ..+.
T Consensus 168 ~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D-----g~i~ 236 (902)
T 2oaj_A 168 LISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED-----NSLV 236 (902)
T ss_dssp EEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT-----CCEE
T ss_pred EEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC-----CeEE
Confidence 666644 357 8998887643221110 0 0 111223333 67888888764 4688
Q ss_pred EEeCCCCCEE
Q psy17309 669 KYNPVTKTWS 678 (824)
Q Consensus 669 ~yd~~~~~W~ 678 (824)
.||..+.+-.
T Consensus 237 lWd~~~g~~~ 246 (902)
T 2oaj_A 237 FWDANSGHMI 246 (902)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcEE
Confidence 9999876643
No 377
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=34.66 E-value=5.7e+02 Score=29.25 Aligned_cols=199 Identities=11% Similarity=0.083 Sum_probs=103.2
Q ss_pred eEEEEECCCCcEEEcccCC----CC----CCCceeEEEEE---CCEEEEEeecC-CCcccceEEEEECCCCceEEeccC-
Q psy17309 476 FVETYDTRADRWVKIDQVD----PM----GPRAYHGTAVI---GYNIYVIGGFD-GNEYYNSCRCFNAVTKVWKEIAPM- 542 (824)
Q Consensus 476 ~~~~yd~~~~~W~~~~~~~----~~----~~r~~~~~~~~---~~~lyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~- 542 (824)
.++.-+-...+|.++.... ++ .....+++++. .+.+|+..|.. .......+++=+-.-.+|+++...
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~ 123 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPV 123 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSS
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCc
Confidence 4666667778999864321 01 11223333332 36788876531 111123455544456789987631
Q ss_pred C-----CCcce-EEEEEE---CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCccc---CceEEEEE----CCEEE
Q psy17309 543 N-----FKRCY-VSTAVH---QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVER---SDASATTL----QGKIY 606 (824)
Q Consensus 543 ~-----~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r---~~~~~~~~----~~~ly 606 (824)
+ ..|.. ..+++. .+.+|+.+. ...+++=+=.-.+|+++..++... .......+ .+.+|
T Consensus 124 ~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 197 (763)
T 3a0f_A 124 PMGANDMGRNGGERLAVNPHWTDELWFGSR------TQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAY 197 (763)
T ss_dssp CCCTTSTTTTSBCCEEECTTSTTCEEEECS------SSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEE
T ss_pred ccCccccCccccceEEECCCCCCEEEEEeC------CCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEE
Confidence 1 12221 234443 367887542 123444333456899988776532 22222233 24677
Q ss_pred EEcccCCCCcCCceEEEeCCCCeEEEcCCCCC--------------------CCcceEEEEE-CCEEEEEecCCC---CC
Q psy17309 607 ITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH--------------------RRSGVSCIAY-HECIYVIGGFNG---MS 662 (824)
Q Consensus 607 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~--------------------~r~~~~~~~~-~~~iyv~GG~~~---~~ 662 (824)
+.....+ .+++=+-.-.+|+.+...|. +...+.++.. ++.+|+...... ..
T Consensus 198 ~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 272 (763)
T 3a0f_A 198 VASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGV 272 (763)
T ss_dssp EEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCC
T ss_pred EEEeCCC-----eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCC
Confidence 7643211 23333223457999875552 2222333333 688998853110 01
Q ss_pred ccceEEEEeCCCCCEEECCCCCC
Q psy17309 663 RMCNGEKYNPVTKTWSQVPDMYN 685 (824)
Q Consensus 663 ~~~~v~~yd~~~~~W~~~~~~p~ 685 (824)
....+++.+-...+|+.+.+.|.
T Consensus 273 ~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 273 LYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp CCEEEEEEETTTTEEEECCTTSS
T ss_pred cceeEEEEeCCCCceEECCCCCC
Confidence 13578889888999999876543
No 378
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=34.47 E-value=4 Score=35.15 Aligned_cols=80 Identities=14% Similarity=0.065 Sum_probs=50.5
Q ss_pred eeeeeeecceEEEEcccccccccceeEEeeecccchhhhheeecccceecCH-hhHHHHHHHHhhcChHhHHHHHHHHHh
Q psy17309 223 YVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQDKIEEKKLFERKLHITE-DNVASLLLATDFFCMSKAQDLCCDFIK 301 (824)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~e~~~~~i~l~~~~~~~~~~ll~~~Yt~~l~l~~-~~v~~ll~~a~~~~i~~l~~~c~~~l~ 301 (824)
+..+.+|+.++.+.+.+|+........ -...+.+.. -+. ...+...+|+-
T Consensus 41 ~~~f~aHk~vLaa~S~yF~~~f~~~~~----------------e~~~i~l~~~~~~-------------~~f~~~l~~iY 91 (125)
T 3ohu_A 41 RKEFRAHRAVLAACSEYFWQALVGQTK----------------NDLVVSLPEEVTA-------------RGFGPLLQFAY 91 (125)
T ss_dssp TEEEEECHHHHHHHBHHHHHHHTTCCC----------------SSCEEECCTTCCH-------------HHHHHHHHHHT
T ss_pred CEEEechHHHHHHcCHHHHHHhcCCCC----------------CCcEEEeCCCCCH-------------HHHHHHHHhHc
Confidence 456778888888888888654332110 022333332 111 12233445554
Q ss_pred h---cCCcchHHHHHHHHHHcCCHHHHHHHHHH
Q psy17309 302 R---LTTPRNCFGILLFSRDHFCKKLEEWTRKY 331 (824)
Q Consensus 302 ~---~l~~~N~~~i~~~a~~~~~~~L~~~~~~~ 331 (824)
. .++.+|+..++.+|+.++++.|.+.|.+|
T Consensus 92 tg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 92 TAKLLLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp TSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred CCceEECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 3 57789999999999999999999888665
No 379
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=33.51 E-value=7.3e+02 Score=30.11 Aligned_cols=161 Identities=15% Similarity=0.208 Sum_probs=89.2
Q ss_pred ceEEEEECCCCceEEeccC--CCCcceEEEEEE--C---CEEEEEeccc-C---C-CCCCeEEEEeCCCCcEEeecCCCc
Q psy17309 524 NSCRCFNAVTKVWKEIAPM--NFKRCYVSTAVH--Q---DVIYAMGGYN-G---Q-RRQNSVEKYNYTENQWSLIAPMNV 591 (824)
Q Consensus 524 ~~~~~yd~~~~~W~~~~~~--~~~r~~~~~~~~--~---~~iyv~GG~~-~---~-~~~~~~~~yd~~t~~W~~~~~~p~ 591 (824)
+.+..+||.+ |+.+... ...-...+++.+ . ...+++|-.. . . .....+..|+....+.+.+...+.
T Consensus 807 s~i~lidp~t--~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v 884 (1158)
T 3ei3_A 807 HNLLIIDQHT--FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEV 884 (1158)
T ss_dssp EEEEEEETTT--CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEeCCC--CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEc
Confidence 4566788765 5544432 222222233332 2 3566666421 1 1 134568888887777777765554
Q ss_pred ccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC--CCCCCCcceEEEEECCEEEEEecCCCCCccceEEE
Q psy17309 592 ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEK 669 (824)
Q Consensus 592 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 669 (824)
.-.-.+++.++|+|.+.=| +.+..||...++.-... ..+. .........++.|++ |-.- ..-.+..
T Consensus 885 ~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~~~~~~I~v-gD~~---~Sv~~~~ 952 (1158)
T 3ei3_A 885 KGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILV-GDLM---RSVLLLA 952 (1158)
T ss_dssp SSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEEECCC-SCEEEEEEETTEEEE-EESS---BCEEEEE
T ss_pred CCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEeecccc-EEEEEEeccCCEEEE-EEhh---heEEEEE
Confidence 4445567778898776544 56788887655422211 1111 011122244666554 4321 1234567
Q ss_pred EeCCCCCEEECCCCCCCCcceEEEEECCE
Q psy17309 670 YNPVTKTWSQVPDMYNPRSNFAIEVIDDM 698 (824)
Q Consensus 670 yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 698 (824)
|++..++-..++.-..+|...++..+++.
T Consensus 953 y~~~~~~L~~~a~D~~~~~vta~~~ld~~ 981 (1158)
T 3ei3_A 953 YKPMEGNFEEIARDFNPNWMSAVEILDDD 981 (1158)
T ss_dssp EETTTTEEEEEEECCSCBCEEEEEEEETT
T ss_pred EEcCCCeEEEEEeecccccEEEEEEEccC
Confidence 89988888888877778887777776443
No 380
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=32.14 E-value=3e+02 Score=30.45 Aligned_cols=155 Identities=9% Similarity=0.077 Sum_probs=86.6
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEE----CCEEEEEcccC------C------CCcCC
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----QGKIYITGGFN------G------HNCLN 618 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~----~~~lyv~GG~~------~------~~~~~ 618 (824)
+..+||.-. ..+.+.+.|+.+.+-..+-.+|....-|+++.. .+++|+.+-+. + ..+.+
T Consensus 101 G~~lfVnd~-----~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 101 GRFLFMNDK-----ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEET-----TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCEEEEEcC-----CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 446777432 346799999999987665578877777887753 56787775321 1 13445
Q ss_pred ceEEEeCCCCe--EEEcCCCCCCCcceEEEEE-CCEEEEEecCCC--------------------------------CCc
Q psy17309 619 SCEVYDPECNQ--WTLIEPMRHRRSGVSCIAY-HECIYVIGGFNG--------------------------------MSR 663 (824)
Q Consensus 619 ~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~--------------------------------~~~ 663 (824)
.+-+.|.++.+ |+..-.- .+ ....+.. ++.+|+.--.++ ...
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg-~p--d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG-NL--DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS-CC--CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred eEEEEECCCCeEEEEEEeCC-Cc--cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 78889998865 5533111 11 1111211 233333332110 111
Q ss_pred cceEEEEeCCCCCEEE-CCCCCCCCcceEEEEE-CC-EEEEEccCCCCceeeEEEEEECCCC
Q psy17309 664 MCNGEKYNPVTKTWSQ-VPDMYNPRSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTD 722 (824)
Q Consensus 664 ~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~ 722 (824)
.+.|-+.|+.+.+.+. +...|.+..-|++..- +| .+|+.+... +.+.+||.++.
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s-----~~VsVid~~~~ 309 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS-----PTVTVLDVTRF 309 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS-----SBEEEEEGGGH
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC-----CeEEEEECccc
Confidence 3457788887733222 2234444455665554 44 566665543 37889998864
No 381
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=28.14 E-value=6.4e+02 Score=27.79 Aligned_cols=174 Identities=11% Similarity=0.026 Sum_probs=88.6
Q ss_pred CCEEEEEeecCCCcccceEEEEECCCCceEEec-cCCC-CcceEEEEE-ECCEEEEEecccCCCCCCeEEEEeCCCCc--
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA-PMNF-KRCYVSTAV-HQDVIYAMGGYNGQRRQNSVEKYNYTENQ-- 582 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~~~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-- 582 (824)
++...+.++.++ .+..||..+ .+..+. .++. .+..++++. .+|+..+.||.+ ..+..||..++.
T Consensus 96 dG~~LAs~s~dg-----~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D-----GtVkIWd~~~~~l~ 164 (588)
T 2j04_A 96 IDDWMAVLSNNG-----NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED-----GELQFFSIRKNSEN 164 (588)
T ss_dssp SSSCEEEEETTS-----CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT-----SEEEEEECCCCTTT
T ss_pred CCCEEEEEeCCC-----cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC-----CEEEEEECCCCccc
Confidence 566666666443 366777433 333333 2221 234455544 378888888854 568889988763
Q ss_pred ------EEeecC-CC-cccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCe----EEEcCCCCCCCcceEEEEECC
Q psy17309 583 ------WSLIAP-MN-VERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ----WTLIEPMRHRRSGVSCIAYHE 650 (824)
Q Consensus 583 ------W~~~~~-~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~p~~r~~~~~~~~~~ 650 (824)
...+.. .. ..-.-.+++...+. ++.+|.+ +.+..+|..++. |..+.+... ..-.+++.. |
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D-----~tVrlWd~~~~~~~~~~~tL~~~h~-~~V~svaFs-g 236 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSN-----NSVFSMTVSASSHQPVSRMIQNASR-RKITDLKIV-D 236 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETT-----CCEEEECCCSSSSCCCEEEEECCCS-SCCCCEEEE-T
T ss_pred cccceeeeeeecccccccccEEEEEEcCCc-EEEEeCC-----CeEEEEECCCCccccceeeeccccc-CcEEEEEEE-C
Confidence 122210 11 11122333444444 6666654 578888887655 334422211 112222233 4
Q ss_pred EEEEEecCCCCCccceEEEEeCCCCCEEECCCCCCCCcceEEEE--E-CCEEEEEccCCC
Q psy17309 651 CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV--I-DDMIFAIGGFNG 707 (824)
Q Consensus 651 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~-~~~i~v~GG~~~ 707 (824)
...+.++. ..|..||..+..=..... ........++. - ++..+++++.++
T Consensus 237 ~~LASa~~------~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 237 YKVVLTCP------GYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp TEEEEECS------SEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCE
T ss_pred CEEEEEeC------CeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCC
Confidence 55555542 588999988776533321 11111222332 2 567888887654
No 382
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=27.09 E-value=3.4e+02 Score=32.83 Aligned_cols=175 Identities=12% Similarity=0.031 Sum_probs=95.0
Q ss_pred ceEEEEEECCEEEEEecccCCCCCCeEEEEeCCCCcE-Eeec----CCCcccCceEEEEE---CCEEEEEcccCCCCcCC
Q psy17309 547 CYVSTAVHQDVIYAMGGYNGQRRQNSVEKYNYTENQW-SLIA----PMNVERSDASATTL---QGKIYITGGFNGHNCLN 618 (824)
Q Consensus 547 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W-~~~~----~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~ 618 (824)
.++++....+.+ ++|.-........++.|+.....| .... .+...-.++++++. ++..+|+|--. .....
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~-~~~~G 412 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPR-YQHTG 412 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETT-GGGTC
T ss_pred ccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccc-ccccc
Confidence 445555555555 788765555567788888766554 3222 12233345555543 23456666322 22345
Q ss_pred ceEEEeCCCCeEEEcCCC----CCCCcceEEEEEC------CEEEEEecCC--CCCccceEEEEeCCC--CCEEECCCC-
Q psy17309 619 SCEVYDPECNQWTLIEPM----RHRRSGVSCIAYH------ECIYVIGGFN--GMSRMCNGEKYNPVT--KTWSQVPDM- 683 (824)
Q Consensus 619 ~v~~yd~~~~~W~~~~~~----p~~r~~~~~~~~~------~~iyv~GG~~--~~~~~~~v~~yd~~~--~~W~~~~~~- 683 (824)
.++.|......|+....+ .....+.+.+..| ..|+++|.-. .......+++|.... ..|.....+
T Consensus 413 ~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l~ 492 (1095)
T 3k6s_A 413 KAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLY 492 (1095)
T ss_dssp EEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSCC
T ss_pred eEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEee
Confidence 788898877778765422 2234556666542 3577777421 112345688886543 457644322
Q ss_pred -----CCCCcceEEEEEC-----C--EEEEEccCCCCceeeEEEEEECCCC-cE
Q psy17309 684 -----YNPRSNFAIEVID-----D--MIFAIGGFNGVTTIYHVECYDEKTD-EW 724 (824)
Q Consensus 684 -----p~~r~~~~~~~~~-----~--~i~v~GG~~~~~~~~~v~~yd~~~~-~W 724 (824)
+..|.+.+++.++ | -| ++|.-........+++|.-..+ .|
T Consensus 493 g~~~~~~~~FG~sva~~gD~NgDG~~Dl-~VGAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 493 GEQGHPWGRFGAALTVLGDVNGDKLTDV-VIGAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp CCCSCSSCCBTSCEEEEECSSSSSCCEE-EEECTTTTTSCCBEEEEEBCSSSCB
T ss_pred cccCCccccCccceEeecccCCCCCcCE-EEeCCcCCCCCCEEEEecCCCCCCc
Confidence 3457777777652 2 24 4443222223346888887665 45
No 383
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=25.67 E-value=5.7e+02 Score=26.41 Aligned_cols=114 Identities=13% Similarity=-0.027 Sum_probs=62.1
Q ss_pred CCEEEEEccCCCCCCCceEEEEECCCCcEEE-cccCCCCCCCceeEEEEE--CCEEEEEeecCC----CcccceEEEEEC
Q psy17309 459 HEILFAIGGWSGGSPTDFVETYDTRADRWVK-IDQVDPMGPRAYHGTAVI--GYNIYVIGGFDG----NEYYNSCRCFNA 531 (824)
Q Consensus 459 ~~~l~~~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~----~~~~~~~~~yd~ 531 (824)
...+|+.-... ....+.+..+|+.+.+-.. ++.... .+ +++. +..+|+...... +...+.+..+|+
T Consensus 44 ~~~vyV~~~~~-~~~~~~V~ViD~~t~~v~~~I~vG~~-----P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 44 ARRVYVNDPAH-FAAVTQQFVIDGEAGRVIGMIDGGFL-----PN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp TTEEEEEECGG-GCSSEEEEEEETTTTEEEEEEEECSS-----CE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCEEEEEcCcc-cCCCCEEEEEECCCCeEEEEEECCCC-----Cc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34566654321 1123689999999887543 222222 23 4444 567888763210 012467999999
Q ss_pred CCCceEEeccCCC-Cc-----ceEEEEEE--CCEEEEEecccCCCCCCeEEEEeCCCCcE
Q psy17309 532 VTKVWKEIAPMNF-KR-----CYVSTAVH--QDVIYAMGGYNGQRRQNSVEKYNYTENQW 583 (824)
Q Consensus 532 ~~~~W~~~~~~~~-~r-----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 583 (824)
.+.+-..--+.+. .| .-+.+++. +..+|+.... ..+.+.+.|..+++-
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----PAPAVGVVDLEGKAF 172 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----CCCeEEEEECCCCcE
Confidence 9987542212221 11 11223332 4578886421 236899999998864
No 384
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=24.29 E-value=6.1e+02 Score=26.51 Aligned_cols=151 Identities=15% Similarity=0.116 Sum_probs=0.0
Q ss_pred CCEEEEEecccCCCCCCeEEEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeEEEcC
Q psy17309 555 QDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE 634 (824)
Q Consensus 555 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 634 (824)
++.||+.-.. ..+.++|+.+++.+.+.. +..+-..-+..-++.||+..-.+.......+..-......+...-
T Consensus 152 ~g~Lyv~D~~------~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~ 224 (433)
T 4hw6_A 152 YDDLYWVGQR------DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSL 224 (433)
T ss_dssp TCEEEEECBT------SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEE
T ss_pred CCEEEEEeCC------CCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccc
Q ss_pred CCCCCCcceEEEEE-CCEEEEEecCCCCCccceEEEEeCCCCCE-EECCCCCCCCcceEEEEE--CCEEEEEccCCCCce
Q psy17309 635 PMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTW-SQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTT 710 (824)
Q Consensus 635 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 710 (824)
. ...+-...++-- ++.||+.-..+ ..+++||+.+.+- +.+...........++.- ++.||+.--.+.
T Consensus 225 ~-~~~~P~giavd~~~G~lyv~d~~~-----~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~--- 295 (433)
T 4hw6_A 225 C-NARGAKTCAVHPQNGKIYYTRYHH-----AMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH--- 295 (433)
T ss_dssp E-ECSSBCCCEECTTTCCEEECBTTC-----SEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT---
T ss_pred c-ccCCCCEEEEeCCCCeEEEEECCC-----CEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC---
Q ss_pred eeEEEEEECCCCc
Q psy17309 711 IYHVECYDEKTDE 723 (824)
Q Consensus 711 ~~~v~~yd~~~~~ 723 (824)
.|+++|.+...
T Consensus 296 --~I~~~~~d~~~ 306 (433)
T 4hw6_A 296 --CIYRVDYNRET 306 (433)
T ss_dssp --EEEEEEBCTTT
T ss_pred --EEEEEeCCCCC
No 385
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=24.28 E-value=5.5e+02 Score=25.70 Aligned_cols=104 Identities=9% Similarity=-0.004 Sum_probs=49.1
Q ss_pred CeEEEEeCC-CCcEEeecCC--Cc-ccCceEEEEE-CC-EEEEEcccCCCCcCCceEEE--eCCCCeEE----EcCCCCC
Q psy17309 571 NSVEKYNYT-ENQWSLIAPM--NV-ERSDASATTL-QG-KIYITGGFNGHNCLNSCEVY--DPECNQWT----LIEPMRH 638 (824)
Q Consensus 571 ~~~~~yd~~-t~~W~~~~~~--p~-~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~y--d~~~~~W~----~~~~~p~ 638 (824)
+.+.+||.. +.+.+.+... +. ...-..++.. +| .+|+.+..+ +.+.+| |+.+++.. .+..+|.
T Consensus 167 ~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-----NRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-----CeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 578999987 6766544322 21 1111222222 44 677764322 345555 55566543 3444443
Q ss_pred CC---c-------ceEEEE-E--CC-EEEEEecCCCCCccceEEEEeCC-CCCEEE
Q psy17309 639 RR---S-------GVSCIA-Y--HE-CIYVIGGFNGMSRMCNGEKYNPV-TKTWSQ 679 (824)
Q Consensus 639 ~r---~-------~~~~~~-~--~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~ 679 (824)
.. . ....+. + +| .||+.....+......+.+|+.. +.+.+.
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 31 1 233334 3 45 46655422111112367788775 455543
No 386
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=24.03 E-value=4.6e+02 Score=29.83 Aligned_cols=169 Identities=7% Similarity=0.033 Sum_probs=0.0
Q ss_pred EEEEeecCCCcccceEEEEECCC--CceEEeccCCCCcceEEEEEECCEEEEEecccCCC-----CCCeEEEEeCCC---
Q psy17309 511 IYVIGGFDGNEYYNSCRCFNAVT--KVWKEIAPMNFKRCYVSTAVHQDVIYAMGGYNGQR-----RQNSVEKYNYTE--- 580 (824)
Q Consensus 511 lyv~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~yd~~t--- 580 (824)
++++=........+.++..|... ..|..+ ..++....+...++.+|+....+-.. ....+...|..+
T Consensus 256 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 332 (711)
T 4hvt_A 256 SLIFISANKDFYNYDNYILDTKYKNLKLQKI---NMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLK 332 (711)
T ss_dssp SEEEEEEESSSSCEEEEEEECSSSSCEEEEC---CSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGS
T ss_pred EEEEEEEecccCceeEEEEcCCCCCCcceEe---ecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccc
Q ss_pred -----CcEEeecCCCcccCceEEEEECCEEEEEcccCCCCcCCceEEEeCCCCeE-EEc-CCCCCCCcceEEEEECCEEE
Q psy17309 581 -----NQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW-TLI-EPMRHRRSGVSCIAYHECIY 653 (824)
Q Consensus 581 -----~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W-~~~-~~~p~~r~~~~~~~~~~~iy 653 (824)
..|+.+-.....+.--.....++.|++..-.++ ...+..+|+.++.| ..- -++|..........-.+.=.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~ 409 (711)
T 4hvt_A 333 TESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEE 409 (711)
T ss_dssp CGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETT---EEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSC
T ss_pred cccccccceEEECCCCCCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCE
Q ss_pred EEecCCCCCccceEEEEeCCCCCEEECCCCCCC
Q psy17309 654 VIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 686 (824)
Q Consensus 654 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 686 (824)
++-...+......++.+|+. .+++.+...+..
T Consensus 410 ~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~~~ 441 (711)
T 4hvt_A 410 ALITIENSIVPPTIYLWVKT-HELKIIRKALYS 441 (711)
T ss_dssp EEEEEECSSSCCEEEEECTT-SCEEEEECCSSC
T ss_pred EEEEEecCCCCCEEEEEeCC-CcEEEEecCCcc
No 387
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=21.10 E-value=5.6e+02 Score=28.65 Aligned_cols=164 Identities=6% Similarity=-0.124 Sum_probs=73.2
Q ss_pred CCEEEEEeecCCCcccceEEEEE----CCCCceEEecc----CCCCcce-----EEEEEECC-EEEEEecccCCCCCCeE
Q psy17309 508 GYNIYVIGGFDGNEYYNSCRCFN----AVTKVWKEIAP----MNFKRCY-----VSTAVHQD-VIYAMGGYNGQRRQNSV 573 (824)
Q Consensus 508 ~~~lyv~GG~~~~~~~~~~~~yd----~~~~~W~~~~~----~~~~r~~-----~~~~~~~~-~iyv~GG~~~~~~~~~~ 573 (824)
++++++.... .......++.+| +.++++..+.. -...... .....-+| .|++...... ....+
T Consensus 263 D~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~--g~~~l 339 (719)
T 1z68_A 263 DERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD--GYKHI 339 (719)
T ss_dssp SSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT--SCEEE
T ss_pred CCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC--CceEE
Confidence 4555544221 112235688899 77766554431 1111111 11122244 4444332111 13679
Q ss_pred EEEeCCCCcEEeecCCCcccCceEEEEECCEEEEEcccC-CCCcCCceEEEeCCCC--eEEEcCC-CCCCCcceEEEEE-
Q psy17309 574 EKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFN-GHNCLNSCEVYDPECN--QWTLIEP-MRHRRSGVSCIAY- 648 (824)
Q Consensus 574 ~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~v~~yd~~~~--~W~~~~~-~p~~r~~~~~~~~- 648 (824)
+.+|..+.+...+..-....... ...-++.||..+... .......++..+..++ +.+.+.. ++........+.+
T Consensus 340 ~~~~~~~~~~~~lt~~~~~v~~~-~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s 418 (719)
T 1z68_A 340 HYIKDTVENAIQITSGKWEAINI-FRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFS 418 (719)
T ss_dssp EEESSCSTTCEECSCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEEC
T ss_pred EEEECCCCceEecccCceEEEEE-EEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEEC
Confidence 99999888766654322211111 122344566554320 1112245666666444 3455542 3222223223333
Q ss_pred -CCEEEEEecCCCCCccceEEEEeCCCCCE
Q psy17309 649 -HECIYVIGGFNGMSRMCNGEKYNPVTKTW 677 (824)
Q Consensus 649 -~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 677 (824)
+++.+++...... ...++.||..+++-
T Consensus 419 ~dg~~l~~~~s~~~--~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 419 DYAKYYALVCYGPG--IPISTLHDGRTDQE 446 (719)
T ss_dssp GGGSSEEEEECCBS--SCEEEEECSSSCCE
T ss_pred CCCCEEEEEcCCCC--CCeEEEEECCCCCE
Confidence 3443443332222 13578888876653
Done!