BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17311
(310 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 253 bits (646), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/271 (49%), Positives = 173/271 (63%), Gaps = 16/271 (5%)
Query: 39 DMYDPENRPIDQ--QQLHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVT 96
D+ DP R + + EYDFIVIGGGSAG+VVASRLSEV W +LL+EAG DE
Sbjct: 45 DLEDPCGRASSRFRSEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGA 104
Query: 97 DVPSLAAWLQLSKFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRF 156
+PS+ S D++Y TEP ACL + RC WPRGKVLGG+SVLN M+YVRGNR
Sbjct: 105 QIPSMFLNFIGSDIDYRYNTEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNRE 164
Query: 157 DYDHWESLGNPGWGYDDVLPYFKKSEDNRN------PYLAKNRSLKLSNGLHD------- 203
DYD W + GNPGW Y+DVLP+FKKSEDN + Y AK L + ++
Sbjct: 165 DYDDWAADGNPGWAYNDVLPFFKKSEDNLDLDEVGTEYHAKGGLLPVGKFPYNPPLSYAI 224
Query: 204 VEAGQELGYENRDINGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVT 263
++AG+ELG+ D+NG+ TGFM+AQ T R G R S+A+AFLRP R R NLHI + T
Sbjct: 225 LKAGEELGFSVHDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTAT 284
Query: 264 KILVNPATKKAYGVQFI-RHGIKQTVLARRE 293
KIL++P TK GV+ + G + +L ++E
Sbjct: 285 KILIHPHTKNVLGVEVSDQFGSTRKILVKKE 315
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 251 bits (641), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/271 (48%), Positives = 173/271 (63%), Gaps = 16/271 (5%)
Query: 39 DMYDPENRPIDQ--QQLHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVT 96
D+ DP R + + EYDFIVIGGGSAG+VVASRLSEV W +LL+EAG DE
Sbjct: 45 DLEDPCGRASTRFRSEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGA 104
Query: 97 DVPSLAAWLQLSKFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRF 156
+PS+ S D++Y TEP ACL + RC WPRGKVLGG+SV+N M+Y+RGNR
Sbjct: 105 QIPSMFLNFIGSDIDYRYNTEPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNRE 164
Query: 157 DYDHWESLGNPGWGYDDVLPYFKKSEDNR------NPYLAKNRSLKLSNGLHD------- 203
DYD W + GNPGW Y DVLP+FKKSEDN Y AK L + ++
Sbjct: 165 DYDDWAAQGNPGWSYQDVLPFFKKSEDNLELDAVGTEYHAKGGLLPVGKFPYNPPLSYAL 224
Query: 204 VEAGQELGYENRDINGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVT 263
++AG+E+G+ +D+NG+ TGFM+AQ T R G R S+A+AFLRP R R NLHI + VT
Sbjct: 225 LKAGEEMGFSVQDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVT 284
Query: 264 KILVNPATKKAYGVQFI-RHGIKQTVLARRE 293
K+L++P TK GV+ + G + +L ++E
Sbjct: 285 KVLIHPGTKNVVGVEVSDQFGSMRKILVKKE 315
>sp|A6X2G7|BETA_OCHA4 Choline dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=betA PE=3 SV=1
Length = 549
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 144/255 (56%), Gaps = 28/255 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPS-LAAWLQLSKFDWQ 113
E DF++IG GSAG+ +A RLSE +S++++E G PD + +P+ L+ + + +DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 114 YKTEPT----GRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGW 169
+ TEP GR+ + PRGKVLGGSS +N M+YVRG+ DYDHW G GW
Sbjct: 62 FSTEPEPHIGGRSLVT--------PRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGW 113
Query: 170 GYDDVLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDIN 218
Y DVLPYFK+ E++ + + N L + G D VEAG E G+E D N
Sbjct: 114 AYADVLPYFKRMENSSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYN 173
Query: 219 GEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQ 278
GEKQ GF + TI G R S A A+L+P KR N+ + ++ KI++ K+A GV+
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGLARKIVLE--GKRAVGVE 230
Query: 279 FIRHGIKQTVLARRE 293
T+ ARRE
Sbjct: 231 IEAGRSFSTIRARRE 245
>sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA
PE=3 SV=1
Length = 550
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 145/252 (57%), Gaps = 22/252 (8%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLE-AGPDENEVTDVPS-LAAWLQLSKFDWQ 113
E DF++IG GSAG+ +A RLSE S++++E G D + +PS L+ L +S +DW
Sbjct: 3 EADFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSIPLNMSLYDWG 62
Query: 114 YKTEPTGRACLGYNQGRC-SWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYD 172
+ +EP LG GR + PRGKV+GGSS +N M+YVRG+ D+DHW G GWG+
Sbjct: 63 FASEP--EPHLG---GRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWGFA 117
Query: 173 DVLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDINGEK 221
DVLPYFK+ EDN + + L + G VEAG++ G+E D NG K
Sbjct: 118 DVLPYFKRMEDNDGGEDGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDDYNGSK 177
Query: 222 QTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIR 281
Q GF + TI G R S A A+L+P KRKN+ + ++ ++++ ++A GV+
Sbjct: 178 QEGFGPMEQTISGGRRWSAASAYLKPALKRKNVSL-VKGFARRVIIE--NQRAIGVEIEA 234
Query: 282 HGIKQTVLARRE 293
H Q V ARRE
Sbjct: 235 HKQIQVVKARRE 246
>sp|Q8G1Z8|BETA_BRUSU Choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330)
GN=betA PE=3 SV=1
Length = 549
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 144/255 (56%), Gaps = 28/255 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPS-LAAWLQLSKFDWQ 113
E DF++IG GSAG+ +A RLSE +S++++E G PD + +P+ L+ + + +DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSENGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 114 YKTEPT----GRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGW 169
+ +EP GR+ + PRGKVLGGSS +N M+YVRG+ D+DHW G GW
Sbjct: 62 FSSEPEPHIGGRSLVT--------PRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGW 113
Query: 170 GYDDVLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDIN 218
Y DVLPYFK+ E++ + + N L + G D VEAG + G+E D N
Sbjct: 114 AYADVLPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYN 173
Query: 219 GEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQ 278
GEKQ GF + TI G R S A A+L+P KR N+ + ++ KI++ K+A GV+
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE--GKRAVGVE 230
Query: 279 FIRHGIKQTVLARRE 293
T+ ARRE
Sbjct: 231 IEAGRTFSTIRARRE 245
>sp|Q8YFY2|BETA_BRUME Choline dehydrogenase OS=Brucella melitensis biotype 1 (strain 16M
/ ATCC 23456 / NCTC 10094) GN=betA PE=3 SV=2
Length = 549
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 144/255 (56%), Gaps = 28/255 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPS-LAAWLQLSKFDWQ 113
E DF++IG GSAG+ +A RLSE +S++++E G PD + +P+ L+ + + +DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 114 YKTEPT----GRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGW 169
+ +EP GR+ + PRGKVLGGSS +N M+YVRG+ D+DHW G GW
Sbjct: 62 FSSEPEPHIRGRSLVT--------PRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGW 113
Query: 170 GYDDVLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDIN 218
Y DVLPYFK+ E++ + + N L + G D VEAG + G+E D N
Sbjct: 114 AYADVLPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYN 173
Query: 219 GEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQ 278
GEKQ GF + TI G R S A A+L+P KR N+ + ++ KI++ K+A GV+
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE--GKRAVGVE 230
Query: 279 FIRHGIKQTVLARRE 293
T+ ARRE
Sbjct: 231 IEAGRTFSTIRARRE 245
>sp|B0CKN4|BETA_BRUSI Choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=betA PE=3 SV=1
Length = 549
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 144/255 (56%), Gaps = 28/255 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPS-LAAWLQLSKFDWQ 113
E DF++IG GSAG+ +A RLSE +S++++E G PD + +P+ L+ + + +DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 114 YKTEPT----GRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGW 169
+ +EP GR+ + PRGKVLGGSS +N M+YVRG+ D+DHW G GW
Sbjct: 62 FSSEPEPHIGGRSLVT--------PRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGW 113
Query: 170 GYDDVLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDIN 218
Y DVLPYFK+ E++ + + N L + G D VEAG + G+E D N
Sbjct: 114 AYADVLPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYN 173
Query: 219 GEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQ 278
GEKQ GF + TI G R S A A+L+P KR N+ + ++ KI++ K+A GV+
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE--GKRAVGVE 230
Query: 279 FIRHGIKQTVLARRE 293
T+ ARRE
Sbjct: 231 IEAGRTFSTIRARRE 245
>sp|A5VPA6|BETA_BRUO2 Choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290
/ NCTC 10512) GN=betA PE=3 SV=1
Length = 549
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 144/255 (56%), Gaps = 28/255 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPS-LAAWLQLSKFDWQ 113
E DF++IG GSAG+ +A RLSE +S++++E G PD + +P+ L+ + + +DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 114 YKTEPT----GRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGW 169
+ +EP GR+ + PRGKVLGGSS +N M+YVRG+ D+DHW G GW
Sbjct: 62 FSSEPEPHIGGRSLVT--------PRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGW 113
Query: 170 GYDDVLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDIN 218
Y DVLPYFK+ E++ + + N L + G D VEAG + G+E D N
Sbjct: 114 AYADVLPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYN 173
Query: 219 GEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQ 278
GEKQ GF + TI G R S A A+L+P KR N+ + ++ KI++ K+A GV+
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE--GKRAVGVE 230
Query: 279 FIRHGIKQTVLARRE 293
T+ ARRE
Sbjct: 231 IEAGRTFSTIRARRE 245
>sp|C3MIE4|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3
SV=1
Length = 549
Score = 157 bits (398), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 149/264 (56%), Gaps = 21/264 (7%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLE-AGPDENEVTDVPSLAAW-LQLSKFDWQ 113
+ D+I+IG GSAG+ +A RLSE + S+++LE G D +P+ AW + +++++W
Sbjct: 2 QADYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGGTDIGPFIQMPAALAWPMSMNRYNWG 61
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y +EP N R + PRGKV+GGSS +N M+YVRG+ D+D WE LG GW Y D
Sbjct: 62 YLSEPEPH----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFDRWEQLGAKGWAYAD 117
Query: 174 VLPYFKKSEDN---RNPYLAKNRSLKLSNG------LHD-VEAGQELGYE-NRDINGEKQ 222
VLPYFK+ E + + + + L + G H VEAG++ G+E D NG KQ
Sbjct: 118 VLPYFKRMEHSHGGEDGWRGTDGPLHVQRGPVKNPLFHAFVEAGKQAGFEMTDDYNGSKQ 177
Query: 223 TGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIRH 282
GF + + T RG R S A A+L+P KR N+ + +R KI++ +A GV+ R
Sbjct: 178 EGFGLMEQTTWRGRRWSAASAYLKPALKRPNVQL-IRCFARKIVIE--NGRATGVEIERG 234
Query: 283 GIKQTVLARREEL-EVISFRTTTL 305
G + V A RE + SF + L
Sbjct: 235 GRIEVVKANREVIVSASSFNSPKL 258
>sp|A9M9H8|BETA_BRUC2 Choline dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC
10854) GN=betA PE=3 SV=1
Length = 549
Score = 157 bits (397), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 144/255 (56%), Gaps = 28/255 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPS-LAAWLQLSKFDWQ 113
E DF++IG GSAG+ +A RLSE +S++++E G PD + +P+ L+ + + +DW
Sbjct: 2 EADFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWG 61
Query: 114 YKTEPT----GRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGW 169
+ +EP GR+ + PRGKVLGGSS +N M+YVRG+ D+DHW G GW
Sbjct: 62 FSSEPEPHIGGRSLVT--------PRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGW 113
Query: 170 GYDDVLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDIN 218
Y DVLPYFK+ E++ + + N L + G D VEAG + G+E D N
Sbjct: 114 AYADVLPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVADDYN 173
Query: 219 GEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQ 278
GEKQ GF + TI G R S A A+L+P KR N+ + ++ KI++ K+A GV+
Sbjct: 174 GEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKL-VKGFARKIVLE--GKRAVGVE 230
Query: 279 FIRHGIKQTVLARRE 293
T+ ARRE
Sbjct: 231 IEAGRTFSTIRARRE 245
>sp|A6U6Y8|BETA_SINMW Choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419)
GN=betA PE=3 SV=1
Length = 549
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLE-AGPDENEVTDVPSLAAW-LQLSKFDWQ 113
+ DF++IG GSAG+ +A RLSE S+++LE G D +P+ AW + +++++W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGANSVVVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y +EP N R + PRGKV+GGSS +N M+YVRG+ D+D WE LG GW Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFDRWEELGAKGWAYAD 117
Query: 174 VLPYFKKSEDN---RNPYLAKNRSLKLSNG------LHD-VEAGQELGYE-NRDINGEKQ 222
VLPY+K+ E + + + L + G H +EAG++ G+E D NG KQ
Sbjct: 118 VLPYYKRMEHSHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKQAGFEVTEDYNGSKQ 177
Query: 223 TGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIRH 282
GF + + T RG R S A A+LRP KR N+ + +R KI++ +A GV+ R
Sbjct: 178 EGFGLMEQTTWRGRRWSAASAYLRPALKRPNVEL-VRCFARKIVIE--NGRATGVEIERG 234
Query: 283 GIKQTVLARREEL-EVISFRTTTL 305
G + V A RE + SF + L
Sbjct: 235 GRTEVVRANREVIVSASSFNSPKL 258
>sp|P54223|BETA_RHIME Choline dehydrogenase OS=Rhizobium meliloti (strain 1021) GN=betA
PE=3 SV=2
Length = 549
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLE-AGPDENEVTDVPSLAAW-LQLSKFDWQ 113
+ DF++IG GSAG+ +A RLSE S+++LE G D +P+ AW + +++++W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNWG 61
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y +EP N R + PRGKV+GGSS +N M+YVRG+ D++ WE LG GW Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYAD 117
Query: 174 VLPYFKKSEDN---RNPYLAKNRSLKLSNG------LHD-VEAGQELGYE-NRDINGEKQ 222
VLPY+K+ E + + + L + G H +EAG+E G+E D NG KQ
Sbjct: 118 VLPYYKRMEHSHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYNGSKQ 177
Query: 223 TGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIRH 282
GF + + T RG R S A A+LRP KR N+ + +R KI++ +A GV+ R
Sbjct: 178 EGFGLMEQTTWRGRRWSAASAYLRPALKRPNVEL-IRCFARKIVIE--NGRATGVEIERG 234
Query: 283 GIKQTVLARREEL-EVISFRTTTL 305
G + V A RE + SF + L
Sbjct: 235 GRIEVVKANREVIVSASSFNSPKL 258
>sp|B2FQ89|BETA_STRMK Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
K279a) GN=betA PE=3 SV=1
Length = 560
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 149/260 (57%), Gaps = 24/260 (9%)
Query: 54 HREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEA-GPDE--NEVTDVP-SLAAWLQLSK 109
H EYD+I+IG GSAG V+A+RL+E A S+LLLEA GPD + T +P +LA LQ +
Sbjct: 4 HNEYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKR 63
Query: 110 FDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPG 168
++W YKT+P N R RGK LGGSS++N M Y+RGN DYD+W S+ G
Sbjct: 64 YNWAYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLED 119
Query: 169 WGYDDVLPYFKKSEDNR---NPYLAKNRSLKLS------NGLHD--VEAGQELGY-ENRD 216
W Y D LPYF+K+E N Y + L+++ N L VEAG + GY D
Sbjct: 120 WTYLDCLPYFRKAETRDIGPNDYHGGDGPLRVTTPKAGNNELFAAMVEAGVQAGYPRTDD 179
Query: 217 INGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAY 275
+NG +Q GF T+ +G R STA+ +L + R NL I A +IL + K+A
Sbjct: 180 LNGYQQEGFGPMDRTVTPKGRRSSTARGYLDLAKPRPNLTIVTHALTDRILF--SGKRAV 237
Query: 276 GVQFIRHGIKQTVLARREEL 295
GVQ++R+ Q ARRE L
Sbjct: 238 GVQWLRNDQPQRATARREVL 257
>sp|B5ZUG2|BETA_RHILW Choline dehydrogenase OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=betA PE=3 SV=1
Length = 549
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 146/264 (55%), Gaps = 21/264 (7%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPSLAAW-LQLSKFDWQ 113
+ DF++IG GSAG+ +A RLSE S+L++EAG D +P+ AW + + +++W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y +EP N R + PRGKV+GGSS +N M+YVRG+ D++ WE LG GW Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYAD 117
Query: 174 VLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDINGEKQ 222
VLPYFK+ E + + + L + G VEAG++ G+E D NG KQ
Sbjct: 118 VLPYFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYNGSKQ 177
Query: 223 TGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIRH 282
GF + + TI G R S A A+L+P KRKN+ I + +I++ +A GV+ R
Sbjct: 178 EGFGLMEQTIFSGRRWSAANAYLKPALKRKNVEI-IYGFAQRIVIEDG--RATGVEIERG 234
Query: 283 GIKQTVLARREEL-EVISFRTTTL 305
G + V A RE + SF + L
Sbjct: 235 GKIEVVKANREVIVSASSFNSPKL 258
>sp|P64264|Y1310_MYCBO Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1310 PE=3
SV=1
Length = 528
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 138/257 (53%), Gaps = 23/257 (8%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP-DENEVTDVPSLAAWLQLSKFD 111
+ + D++V+G GSAGAVVASRLS +++ LEAGP D+N VP+ + L S+ D
Sbjct: 1 MDTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEID 60
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGY 171
W Y TEP + WPRGKVLGGSS +N M++VRG DYD W + P W Y
Sbjct: 61 WDYLTEPQPE----LDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSY 116
Query: 172 DDVLPYFKKSEDNRNP---------------YLAKNRSLKLSNGLHDVEAGQELGYENRD 216
DVL YF++ E+ ++++ RS + + A +E G+
Sbjct: 117 ADVLGYFRRIENVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAW-LAAARECGFAAAR 175
Query: 217 INGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYG 276
N + GF T RRG+R STA A+L+P +RKNL + A T+++++ +A G
Sbjct: 176 PNSPRPEGFCETVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVID--GDRAVG 233
Query: 277 VQFIRHGIKQTVLARRE 293
V++ G + V ARRE
Sbjct: 234 VEYQSDGQTRIVYARRE 250
>sp|P64263|Y1279_MYCTU Uncharacterized GMC-type oxidoreductase Rv1279/MT1316
OS=Mycobacterium tuberculosis GN=Rv1279 PE=3 SV=1
Length = 528
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 138/257 (53%), Gaps = 23/257 (8%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP-DENEVTDVPSLAAWLQLSKFD 111
+ + D++V+G GSAGAVVASRLS +++ LEAGP D+N VP+ + L S+ D
Sbjct: 1 MDTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEID 60
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGY 171
W Y TEP + WPRGKVLGGSS +N M++VRG DYD W + P W Y
Sbjct: 61 WDYLTEPQPE----LDGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSY 116
Query: 172 DDVLPYFKKSEDNRNP---------------YLAKNRSLKLSNGLHDVEAGQELGYENRD 216
DVL YF++ E+ ++++ RS + + A +E G+
Sbjct: 117 ADVLGYFRRIENVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAW-LAAARECGFAAAR 175
Query: 217 INGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYG 276
N + GF T RRG+R STA A+L+P +RKNL + A T+++++ +A G
Sbjct: 176 PNSPRPEGFCETVVTQRRGARFSTADAYLKPAMRRKNLRVLTGATATRVVID--GDRAVG 233
Query: 277 VQFIRHGIKQTVLARRE 293
V++ G + V ARRE
Sbjct: 234 VEYQSDGQTRIVYARRE 250
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 140/256 (54%), Gaps = 21/256 (8%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPSLAAW-LQLSKF 110
+ + YD+I++G GSAG V+A RLSE S+LLLEAG D++ +P+ ++ + K+
Sbjct: 1 MQQHYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKY 60
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWG 170
WQ++T+ A + R PRGKVLGGSS +N M+YVRG+ D+D WE G GW
Sbjct: 61 AWQFETD----AEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWN 116
Query: 171 YDDVLPYFKKSE---DNRNPYLAKNRSLKLSNGLHD---------VEAGQELGY-ENRDI 217
Y LPYF+++E D + Y + L G ++AG+E GY E D
Sbjct: 117 YQACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDY 176
Query: 218 NGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
NG +Q GF T++ G R ST+ A+L +KR N + V +IL+ K+A GV
Sbjct: 177 NGYQQEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLE--EKRAVGV 234
Query: 278 QFIRHGIKQTVLARRE 293
+F G +T A+ E
Sbjct: 235 EFELAGELRTCFAKNE 250
>sp|Q8D3K2|BETA_VIBVU Choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) GN=betA
PE=3 SV=1
Length = 560
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 140/256 (54%), Gaps = 21/256 (8%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPSLAAW-LQLSKF 110
+ + YD+I++G GSAG V+A RLSE S+LLLEAG D++ +P+ ++ + K+
Sbjct: 1 MQQHYDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGGSDKSIFIQMPTALSYPMNSEKY 60
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWG 170
WQ++T+ A + R PRGKVLGGSS +N M+YVRG+ D+D WE G GW
Sbjct: 61 AWQFETD----AEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWN 116
Query: 171 YDDVLPYFKKSE---DNRNPYLAKNRSLKLSNGLHD---------VEAGQELGY-ENRDI 217
Y LPYF+++E D + Y + L G ++AG+E GY E D
Sbjct: 117 YQACLPYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDY 176
Query: 218 NGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
NG +Q GF T++ G R ST+ A+L +KR N + V +IL+ K+A GV
Sbjct: 177 NGYQQEGFGPMHMTVKNGVRASTSNAYLSRAKKRSNFKLIKGVVVQRILLE--EKRAVGV 234
Query: 278 QFIRHGIKQTVLARRE 293
+F G +T A+ E
Sbjct: 235 EFELAGELRTCFAKNE 250
>sp|B4SHV9|BETA_STRM5 Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
R551-3) GN=betA PE=3 SV=1
Length = 560
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 147/260 (56%), Gaps = 24/260 (9%)
Query: 54 HREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEA-GPDE--NEVTDVP-SLAAWLQLSK 109
H EYD+I+IG GSAG V+A+RL+E A S+LLLEA GPD + T +P +LA LQ +
Sbjct: 4 HNEYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKR 63
Query: 110 FDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPG 168
++W YKT+P N R RGK LGGSS++N M Y+RGN DYD+W S+ G
Sbjct: 64 YNWAYKTDPEPF----MNNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPGLED 119
Query: 169 WGYDDVLPYFKKSED---NRNPYLAKNRSLKLS------NGLHD--VEAGQELGY-ENRD 216
W Y D LPYF+K+E N Y L+++ N L VEAG + GY D
Sbjct: 120 WTYLDCLPYFRKAETRDIGPNDYHGGEGPLRVTTPKAGNNELFAAMVEAGVQAGYPRTDD 179
Query: 217 INGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAY 275
+NG +Q GF T+ +G R STA+ +L + R NL I A +IL + K+A
Sbjct: 180 LNGYQQEGFGPMDRTVTPKGRRSSTARGYLDLAKPRPNLTIVTHALTDRILF--SGKRAV 237
Query: 276 GVQFIRHGIKQTVLARREEL 295
GVQ++ + Q ARRE L
Sbjct: 238 GVQWLHNDQPQRATARREVL 257
>sp|Q1MJU4|BETA_RHIL3 Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=betA PE=3 SV=1
Length = 549
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 146/264 (55%), Gaps = 21/264 (7%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPSLAAW-LQLSKFDWQ 113
+ DF++IG GSAG+ +A RLSE S++++EAG D +P+ AW + + +++W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y +EP N R + PRGKV+GGSS +N M+YVRG+ D++ WE LG GW Y D
Sbjct: 62 YLSEPEAN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 174 VLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDINGEKQ 222
VLPYFK+ E + + + L + G VEAG++ G+E D NG KQ
Sbjct: 118 VLPYFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYNGSKQ 177
Query: 223 TGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIRH 282
GF + + TI G R S A A+L+P KR N+ I + +I++ +A GV+ R+
Sbjct: 178 EGFGLMEQTIFGGRRWSAANAYLKPALKRDNVKI-VYGLAQRIVIEDG--RATGVEIERN 234
Query: 283 GIKQTVLARREEL-EVISFRTTTL 305
G + V A RE + SF + L
Sbjct: 235 GRIEVVKANREVIVSASSFNSPKL 258
>sp|B3PTE0|BETA_RHIE6 Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA
PE=3 SV=1
Length = 549
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 21/264 (7%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPSLAAW-LQLSKFDWQ 113
+ DF++IG GSAG+ +A RLSE S+L++EAG D +P+ AW + + +++W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y +EP N R + PRGKV+GGSS +N M+YVRG+ D++ WE LG GW Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 174 VLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYENR-DINGEKQ 222
VLPYFK+ E + + + L + G +EAG++ G+E D NG KQ
Sbjct: 118 VLPYFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYNGSKQ 177
Query: 223 TGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIRH 282
GF + + TI G R S A A+L+P KRKN+ + + KI++ +A GV+ R
Sbjct: 178 EGFGLMEQTIFSGRRWSAANAYLKPALKRKNVGM-VYGLARKIVIE--DGRATGVEIERG 234
Query: 283 GIKQTVLARREEL-EVISFRTTTL 305
G + V A RE + SF + L
Sbjct: 235 GKVEVVKATREVIVSASSFNSPKL 258
>sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1
Length = 559
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 146/258 (56%), Gaps = 24/258 (9%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPS-LAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E + S+LLLEAG PD + T +P+ LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+DHW ++ G W
Sbjct: 62 WAYETDPEPH----MNDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLEDWS 117
Query: 171 YDDVLPYFKKSED---NRNPYLAKNRSL-----KLSNG--LHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E N Y + + K+ N H VEAG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDVGANDYHGASGPVSVTTPKMGNNELFHAMVEAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L + RKNL I A +IL + K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFD--GKRAVGV 235
Query: 278 QFIRHGIKQTVLARREEL 295
+ + QT ARRE L
Sbjct: 236 AYFKGESAQTAKARREVL 253
>sp|A7N2P9|BETA_VIBHB Choline dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=betA PE=3 SV=1
Length = 569
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 141/256 (55%), Gaps = 21/256 (8%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPSLAAW-LQLSKF 110
+ + YD+I++G GSAG V+A RLSE +LLLEAG D++ +P+ ++ + K+
Sbjct: 1 MQQHYDYIIVGAGSAGCVLADRLSESGQHQVLLLEAGGSDKSIFIQMPTALSYPMNTEKY 60
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWG 170
WQ++T L Q C PRGKVLGGSS +N M+YVRG+ D+D WE+ G GW
Sbjct: 61 AWQFET--VAEEGLDGRQLHC--PRGKVLGGSSSINGMVYVRGHACDFDEWEAEGAKGWN 116
Query: 171 YDDVLPYFKKSED---NRNPYLAKNRSLKLSNG-------LHD--VEAGQELGY-ENRDI 217
Y LPYF+K+E + Y + + NG L+ +EAG++ GY E +D
Sbjct: 117 YQACLPYFRKAETWTGGADEYRGGSGPVGTCNGNDMKLNPLYQAFIEAGKDAGYPETQDY 176
Query: 218 NGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
NG +Q GF T+ +G R ST+ A+L +KR N + +IL+ KKA G+
Sbjct: 177 NGYQQEGFGPMHMTVDKGVRASTSNAYLSRAKKRSNFTLMKGVTAHRILLE--GKKAVGI 234
Query: 278 QFIRHGIKQTVLARRE 293
+F + G + A +E
Sbjct: 235 EFEQSGEIKQCFANKE 250
>sp|Q2KB43|BETA_RHIEC Choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=betA PE=3 SV=1
Length = 549
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 143/264 (54%), Gaps = 21/264 (7%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPSLAAW-LQLSKFDWQ 113
+ DF++IG GSAG+ +A RLSE S+L++EAG D +P+ AW + + +++W
Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y +EP N R + PRGKV+GGSS +N M+YVRG+ D++ WE LG GW Y D
Sbjct: 62 YLSEPEPN----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYAD 117
Query: 174 VLPYFKKSEDN---RNPYLAKNRSLKLSNGLHD-------VEAGQELGYE-NRDINGEKQ 222
VLPYFK+ E + + + L + G +EAG++ G+E D NG KQ
Sbjct: 118 VLPYFKRMEHSHGGEEGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYNGSKQ 177
Query: 223 TGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIRH 282
GF + + TI G R S A A+L+P KR N+ I ++ N +A GV+ R
Sbjct: 178 EGFGLMEQTIFAGRRWSAANAYLKPALKRDNVGIVYGLARRIVIEN---GRATGVEIERG 234
Query: 283 GIKQTVLARREEL-EVISFRTTTL 305
G + V A RE + SF + L
Sbjct: 235 GRTEVVKANREVIVSASSFNSPKL 258
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 140/258 (54%), Gaps = 26/258 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDEN---------EVTDVPSLAAWLQ 106
EY F+V+G GSAG V+ASRL+E + +LLLEAGP + ++ +L + L
Sbjct: 42 EYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLC 101
Query: 107 LSKFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGN 166
K++W Y TEP G + WPRG+V GGSS LN M+Y+RG+ DY+ W G
Sbjct: 102 DDKYNWYYHTEPQP----GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREGA 157
Query: 167 PGWGYDDVLPYFKKSEDNR---NPYLAKNRSLKLSNG-----LHD--VEAGQELGYE-NR 215
GW Y LPYF+K++ + N Y + L +S G LH ++A ++ GY
Sbjct: 158 EGWDYAHCLPYFRKAQRHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTE 217
Query: 216 DINGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAY 275
D+NG +Q GF T+ +G R STA A+L PV R NL ++ V+++L +A
Sbjct: 218 DMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFE--GTRAV 275
Query: 276 GVQFIRHGIKQTVLARRE 293
GV++I+ G + RE
Sbjct: 276 GVEYIKDGQRHKAYVSRE 293
>sp|C6DKY4|BETA_PECCP Choline dehydrogenase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=betA PE=3 SV=1
Length = 559
Score = 150 bits (380), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/258 (41%), Positives = 145/258 (56%), Gaps = 24/258 (9%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEA-GPDE--NEVTDVP-SLAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E + S+LLLEA GPD + T +P +LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+D+W ++ G W
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWATMPGLEDWS 117
Query: 171 YDDVLPYFKKSED---NRNPYLAKNRSL-----KLSNG--LHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E N Y + K+ N H VEAG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDVGSNDYHGATGPVSVATPKMGNNELFHAMVEAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L + RKNL I A KIL K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRKNLTIVTHALTDKILFE--GKRAVGV 235
Query: 278 QFIRHGIKQTVLARREEL 295
+ + QTV ARRE L
Sbjct: 236 AYFKGESPQTVQARREVL 253
>sp|B9JBA2|BETA_AGRRK Choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=betA PE=3 SV=1
Length = 549
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 21/264 (7%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLE-AGPDENEVTDVPSLAAW-LQLSKFDWQ 113
+ DF++IG GSAG+ +ASRLSE ++++LE G D +P+ AW + + +++W
Sbjct: 2 QADFVIIGSGSAGSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNWG 61
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y +EP + N R + PRGKV+GGSS +N M+YVRG+ D++ WE LG GW Y D
Sbjct: 62 YLSEPEPQ----LNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAQGWAYAD 117
Query: 174 VLPYFKKSEDN---RNPYLAKNRSLKLSNG------LHD-VEAGQELGYE-NRDINGEKQ 222
VLPYFK+ E + + + L + G H +EAG++ G+E D NG KQ
Sbjct: 118 VLPYFKRMEHSHGGEEGWRGTDGPLHVRRGDARNPLFHAFIEAGKQAGFEATEDYNGGKQ 177
Query: 223 TGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIRH 282
GF + + T G R S A A+L+P KR N+ + +R K+++ +A GV+ R
Sbjct: 178 EGFGLMEQTTWMGRRWSAATAYLKPALKRPNVEL-IRCFARKVVIE--NGRATGVEIERG 234
Query: 283 GIKQTVLARREEL-EVISFRTTTL 305
G + V A E + SF + L
Sbjct: 235 GKIEIVKANSEVIVSASSFNSPKL 258
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPSLAAW-LQLSKFDWQ 113
+ D++++G GSAG+ +A RLSE +S++++EAG D +P+ AW + + +++W
Sbjct: 2 QADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWG 61
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y +EP + R + PRGKV+GGSS +N ++YVRG+ D++ WE LG GW Y D
Sbjct: 62 YLSEPEPN----LDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYAD 117
Query: 174 VLPYFKKSEDN---RNPYLAKNRSLKLSNG------LHD-VEAGQELGYE-NRDINGEKQ 222
VLPYFK+ E + + + L + G H ++AG + G+E D NG KQ
Sbjct: 118 VLPYFKRMEHSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQ 177
Query: 223 TGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIRH 282
GF + + TI G R S A A+L+P KR N+ + + K+++ +A GV+ R
Sbjct: 178 EGFGLMEQTIHNGRRWSAANAYLKPALKRGNVTL-VNGFARKVIIE--NGRAVGVEIERR 234
Query: 283 GIKQTVLARREEL-EVISFRTTTL 305
G +TV A RE + SF + L
Sbjct: 235 GRVETVKANREVIVSASSFNSPKL 258
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 139/258 (53%), Gaps = 26/258 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDEN---------EVTDVPSLAAWLQ 106
EY FIV+G GSAG V+A+RL+E + +LLLEAGP + ++ +L A L
Sbjct: 45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLC 104
Query: 107 LSKFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGN 166
K++W Y TE A G + WPRG+V GGSS LN M+Y+RG+ DY+ W G
Sbjct: 105 DDKYNWYYHTE----AQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGA 160
Query: 167 PGWGYDDVLPYFKKSEDNR---NPYLAKNRSLKLSNG-----LHD--VEAGQELGYE-NR 215
GW Y LPYF+K++ + N Y + L +S G LH ++A ++ GY
Sbjct: 161 EGWDYAHCLPYFRKAQKHELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTE 220
Query: 216 DINGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAY 275
D+NG +Q GF TI +G R STA A+LRP R NL ++ V+++L +A
Sbjct: 221 DMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE--GTRAV 278
Query: 276 GVQFIRHGIKQTVLARRE 293
GV++I+ G RE
Sbjct: 279 GVEYIKDGQSHKAYVSRE 296
>sp|Q8PPG8|BETA_XANAC Choline dehydrogenase OS=Xanthomonas axonopodis pv. citri (strain
306) GN=betA PE=3 SV=1
Length = 556
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 145/263 (55%), Gaps = 26/263 (9%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEV---TDVP-SLAAWLQLS 108
+ REYD+I+IG GSAG V+A+RL+E ++LLLEAG + V T +P +LA LQ
Sbjct: 1 MQREYDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDYRVDFRTQMPAALAFPLQGR 60
Query: 109 KFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHW-ESLGNP 167
+++W Y+TEP + R RGK LGGSS++N M Y+RGN D+DHW + G
Sbjct: 61 RYNWAYETEPEPY----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLE 116
Query: 168 GWGYDDVLPYFKKSED---NRNPYLAKNRSLKLSNGLHD--------VEAGQELGYENR- 215
W Y DVLPYF+K+E N Y + + ++ +D VEAG + GY
Sbjct: 117 DWSYRDVLPYFRKAETRDIGANDYHGGDGPVSVATPKNDNNVLFHAMVEAGVQAGYPRTG 176
Query: 216 DINGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKA 274
D+NG +Q GF T+ RG R STA+ +L + R LHI A +IL A K+A
Sbjct: 177 DLNGYQQEGFGPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILF--AGKRA 234
Query: 275 YGVQFIRHGIKQTV--LARREEL 295
GV ++ + + ARRE L
Sbjct: 235 IGVHYLVGNSSEGIDAHARREVL 257
>sp|A4TNP2|BETA_YERPP Choline dehydrogenase OS=Yersinia pestis (strain Pestoides F)
GN=betA PE=3 SV=1
Length = 567
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 142/260 (54%), Gaps = 26/260 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPS-LAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E A ++LLLEAG PD + T +P+ LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+DHW SL G W
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLEDWS 117
Query: 171 YDDVLPYFKKSED----------NRNPYLAKNRSLKLSNGLHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E P + + H V AG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDIGPNDFHGGEGPVSVTTPKIGNNPLFHAMVAAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L R R NL I A +IL K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--GKRATGV 235
Query: 278 QFIR--HGIKQTVLARREEL 295
++++ G QT ARRE L
Sbjct: 236 RYLKGDAGTGQTAYARREVL 255
>sp|Q8P5D7|BETA_XANCP Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=betA PE=3
SV=1
Length = 556
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 147/263 (55%), Gaps = 26/263 (9%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEA-GPDE--NEVTDVP-SLAAWLQLS 108
+ REYD+I+IG GSAG V+A+RL+E S+LLLEA GPD + T +P +LA LQ
Sbjct: 1 MQREYDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGR 60
Query: 109 KFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHW-ESLGNP 167
+++W Y+TEP + R RGK LGGSS++N M Y+RGN D+DHW + G
Sbjct: 61 RYNWAYETEPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLE 116
Query: 168 GWGYDDVLPYFKKSED---NRNPYLAKNRSLKLSNGLHD--------VEAGQELGY-ENR 215
WGY DVLPYF+K+E N Y + ++ +D V+AG + GY
Sbjct: 117 DWGYRDVLPYFRKAETRDIGANDYHGGEGPVSVATPKNDNNVLFQAMVDAGVQAGYPRTD 176
Query: 216 DINGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKA 274
D+NG +Q GF T+ +G R STA+ +L + R +LHI A +IL A K+A
Sbjct: 177 DLNGYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRA 234
Query: 275 YGVQFIRHGIKQTV--LARREEL 295
GV ++ + + ARRE L
Sbjct: 235 VGVHYLVGNSSEGIDAHARREVL 257
>sp|B0RNU9|BETA_XANCB Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain B100) GN=betA PE=3 SV=1
Length = 556
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 147/263 (55%), Gaps = 26/263 (9%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEA-GPDE--NEVTDVP-SLAAWLQLS 108
+ REYD+I+IG GSAG V+A+RL+E S+LLLEA GPD + T +P +LA LQ
Sbjct: 1 MQREYDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGR 60
Query: 109 KFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHW-ESLGNP 167
+++W Y+TEP + R RGK LGGSS++N M Y+RGN D+DHW + G
Sbjct: 61 RYNWAYETEPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLE 116
Query: 168 GWGYDDVLPYFKKSED---NRNPYLAKNRSLKLSNGLHD--------VEAGQELGY-ENR 215
WGY DVLPYF+K+E N Y + ++ +D V+AG + GY
Sbjct: 117 DWGYRDVLPYFRKAETRDIGANDYHGGEGPVSVATPKNDNNVLFQAMVDAGVQAGYPRTD 176
Query: 216 DINGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKA 274
D+NG +Q GF T+ +G R STA+ +L + R +LHI A +IL A K+A
Sbjct: 177 DLNGYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRA 234
Query: 275 YGVQFIRHGIKQTV--LARREEL 295
GV ++ + + ARRE L
Sbjct: 235 VGVHYLVGNSSEGIDAHARREVL 257
>sp|Q4UYN5|BETA_XANC8 Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=betA PE=3 SV=1
Length = 556
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 147/263 (55%), Gaps = 26/263 (9%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEA-GPDE--NEVTDVP-SLAAWLQLS 108
+ REYD+I+IG GSAG V+A+RL+E S+LLLEA GPD + T +P +LA LQ
Sbjct: 1 MQREYDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGR 60
Query: 109 KFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHW-ESLGNP 167
+++W Y+TEP + R RGK LGGSS++N M Y+RGN D+DHW + G
Sbjct: 61 RYNWAYETEPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLE 116
Query: 168 GWGYDDVLPYFKKSED---NRNPYLAKNRSLKLSNGLHD--------VEAGQELGY-ENR 215
WGY DVLPYF+K+E N Y + ++ +D V+AG + GY
Sbjct: 117 DWGYRDVLPYFRKAETRDIGANDYHGGEGPVSVATPKNDNNVLFQAMVDAGVQAGYPRTD 176
Query: 216 DINGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKA 274
D+NG +Q GF T+ +G R STA+ +L + R +LHI A +IL A K+A
Sbjct: 177 DLNGYQQEGFGPMDRTVTPQGRRASTARGYLDMAKPRDSLHIVTHATTDRILF--AGKRA 234
Query: 275 YGVQFIRHGIKQTV--LARREEL 295
GV ++ + + ARRE L
Sbjct: 235 VGVHYLVGNSSEGIDAHARREVL 257
>sp|Q1CFR7|BETA_YERPN Choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=betA PE=3 SV=1
Length = 567
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 142/260 (54%), Gaps = 26/260 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPS-LAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E A ++LLLEAG PD + T +P+ LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+DHW SL G W
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLEDWS 117
Query: 171 YDDVLPYFKKSED----------NRNPYLAKNRSLKLSNGLHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E P + + H V AG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDIGPNDFHGGEGPVSVTTPKIGNNPLFHAMVAAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L R R NL I A +IL K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--GKRATGV 235
Query: 278 QFIR--HGIKQTVLARREEL 295
++++ G QT ARRE L
Sbjct: 236 RYLKGDAGTGQTAYARREVL 255
>sp|Q8ZGW0|BETA_YERPE Choline dehydrogenase OS=Yersinia pestis GN=betA PE=3 SV=1
Length = 567
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 142/260 (54%), Gaps = 26/260 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPS-LAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E A ++LLLEAG PD + T +P+ LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+DHW SL G W
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLEDWS 117
Query: 171 YDDVLPYFKKSED----------NRNPYLAKNRSLKLSNGLHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E P + + H V AG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDIGPNDFHGGEGPVSVTTPKIGNNPLFHAMVAAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L R R NL I A +IL K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--GKRATGV 235
Query: 278 QFIR--HGIKQTVLARREEL 295
++++ G QT ARRE L
Sbjct: 236 RYLKGDAGTGQTAYARREVL 255
>sp|Q1C932|BETA_YERPA Choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=betA PE=3 SV=1
Length = 567
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 142/260 (54%), Gaps = 26/260 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPS-LAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E A ++LLLEAG PD + T +P+ LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+DHW SL G W
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLEDWS 117
Query: 171 YDDVLPYFKKSED----------NRNPYLAKNRSLKLSNGLHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E P + + H V AG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDIGPNDFHGGEGPVSVTTPKIGNNPLFHAMVAAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L R R NL I A +IL K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--GKRATGV 235
Query: 278 QFIR--HGIKQTVLARREEL 295
++++ G QT ARRE L
Sbjct: 236 RYLKGDAGTGQTAYARREVL 255
>sp|Q6LGH5|BETA_PHOPR Choline dehydrogenase OS=Photobacterium profundum GN=betA PE=3 SV=1
Length = 568
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 139/259 (53%), Gaps = 23/259 (8%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDENEVTDVPSLAAW-LQLSKF 110
++ YD+I++G GSAG V+A RLS ILLLEAG D + +P+ ++ + K+
Sbjct: 1 MNTTYDYIIVGAGSAGCVLADRLSASGEHYILLLEAGGSDRSIFIQMPTALSYPMNSEKY 60
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWG 170
WQ++T+P G + PRG+VLGGSS +N M+YVRG+ DYD W G GW
Sbjct: 61 AWQFETQPEA----GLDSRSLHCPRGRVLGGSSSINGMVYVRGHACDYDEWVEQGAEGWS 116
Query: 171 YDDVLPYFKKSED---NRNPYLAKNRSLKLSNGLHDVE----------AGQELGY-ENRD 216
Y + LPYF+++E + Y + + NG +D+E AGQ+ GY + D
Sbjct: 117 YQECLPYFRRAESWIHGEDTYRGGDGPVGTCNG-NDMELNPLYQAFIDAGQQAGYPKTDD 175
Query: 217 INGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYG 276
NG +Q GF T+ +G R ST+ A+LR KR NL + K+L+ K+A G
Sbjct: 176 YNGYQQEGFGPMHMTVDKGIRASTSNAYLRRAMKRSNLTVRKGVVTRKVLIK--NKQAIG 233
Query: 277 VQFIRHGIKQTVLARREEL 295
V+ G Q+V A E L
Sbjct: 234 VEIEVGGKVQSVYANTEVL 252
>sp|Q66D54|BETA_YERPS Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=betA PE=3 SV=1
Length = 567
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 141/260 (54%), Gaps = 26/260 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPS-LAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E A ++LLLEAG PD + T +P+ LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+DHW SL G W
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLEDWS 117
Query: 171 YDDVLPYFKKSED----------NRNPYLAKNRSLKLSNGLHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E P + + H V AG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDVGPNDFHGGEGPVSVTTPKIDNNPLFHAMVAAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L R R NL I A +IL K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--GKRATGV 235
Query: 278 QFIR--HGIKQTVLARREEL 295
+++ G QT ARRE L
Sbjct: 236 SYLKGDAGTGQTAHARREVL 255
>sp|B2K8U4|BETA_YERPB Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=betA PE=3 SV=1
Length = 567
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 141/260 (54%), Gaps = 26/260 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPS-LAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E A ++LLLEAG PD + T +P+ LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+DHW SL G W
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLEDWS 117
Query: 171 YDDVLPYFKKSED----------NRNPYLAKNRSLKLSNGLHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E P + + H V AG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDVGPNDFHGGEGPVSVTTPKIDNNPLFHAMVAAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L R R NL I A +IL K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--GKRATGV 235
Query: 278 QFIR--HGIKQTVLARREEL 295
+++ G QT ARRE L
Sbjct: 236 SYLKGDAGTGQTAHARREVL 255
>sp|B1JSR0|BETA_YERPY Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=betA PE=3 SV=1
Length = 567
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 142/260 (54%), Gaps = 26/260 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPS-LAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E A ++LLLEAG PD + T +P+ LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+DHW SL G W
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLEDWS 117
Query: 171 YDDVLPYFKKSED----------NRNPYLAKNRSLKLSNGLHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E P + + H V AG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDIGPNDFHGGEGPVNVTTPKIGNNPLFHAMVAAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L R R NL I A +IL K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--GKRATGV 235
Query: 278 QFIR--HGIKQTVLARREEL 295
++++ G QT ARRE L
Sbjct: 236 RYLKGDAGTGQTAYARREVL 255
>sp|A7FKL6|BETA_YERP3 Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=betA PE=3 SV=1
Length = 567
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 142/260 (54%), Gaps = 26/260 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPS-LAAWLQLSKFD 111
EYD+I+IG GSAG V+A+RL+E A ++LLLEAG PD + T +P+ LA LQ +++
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRYN 61
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESL-GNPGWG 170
W Y+T+P N R RGK LGGSS++N M Y+RGN D+DHW SL G W
Sbjct: 62 WAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLEDWS 117
Query: 171 YDDVLPYFKKSED----------NRNPYLAKNRSLKLSNGLHD-VEAGQELGY-ENRDIN 218
Y D LPYF+K+E P + + H V AG + GY D+N
Sbjct: 118 YLDCLPYFRKAETRDIGPNDFHGGEGPVNVTTPKIGNNPLFHAMVAAGVQAGYPRTDDLN 177
Query: 219 GEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGV 277
G +Q GF T+ +G R STA+ +L R R NL I A +IL K+A GV
Sbjct: 178 GYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--GKRATGV 235
Query: 278 QFIR--HGIKQTVLARREEL 295
++++ G QT ARRE L
Sbjct: 236 RYLKGDAGTGQTAYARREVL 255
>sp|Q3BXK8|BETA_XANC5 Choline dehydrogenase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=betA PE=3 SV=1
Length = 556
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 146/263 (55%), Gaps = 26/263 (9%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEA-GPDE--NEVTDVP-SLAAWLQLS 108
+ REYD+I+IG GSAG V+A+RL+E ++LLLEA GPD + T +P +LA LQ
Sbjct: 1 MQREYDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGR 60
Query: 109 KFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHW-ESLGNP 167
+++W Y+TEP + R RGK LGGSS++N M Y+RGN D+DHW + G
Sbjct: 61 RYNWAYETEPEPY----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLE 116
Query: 168 GWGYDDVLPYFKKSED---NRNPYLAKNRSLKLSNGLHD--------VEAGQELGY-ENR 215
W Y DVLPYF+K+E N Y + + ++ +D VEAG + GY
Sbjct: 117 DWSYRDVLPYFRKAETRDIGANDYHGGDGPVSVATPKNDNNVLFHAMVEAGVQAGYPRTD 176
Query: 216 DINGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKA 274
D+NG +Q GF T+ RG R STA+ +L + R LHI A +IL A K+A
Sbjct: 177 DLNGYQQEGFGPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILF--AGKRA 234
Query: 275 YGVQFIRHGIKQTV--LARREEL 295
GV ++ + + ARRE L
Sbjct: 235 IGVHYLVGNSSEGIDAHARREVL 257
>sp|Q3JLL7|BETA_BURP1 Choline dehydrogenase OS=Burkholderia pseudomallei (strain 1710b)
GN=betA PE=3 SV=1
Length = 565
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 144/259 (55%), Gaps = 24/259 (9%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPSLAAW-LQLSKF 110
RE+D+I+ G GSAG V+A+RL+E ++LLLEAG PD + T +P+ A+ LQ ++
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWES-LGNPGW 169
+W Y+T+P N R RGK LGGSS++N M Y+RGN DYD+W + G W
Sbjct: 64 NWAYETDPEPH----MNHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHKGLEDW 119
Query: 170 GYDDVLPYFKKSEDNR---NPYLAKNRSLKLS------NGLHD--VEAGQELGY-ENRDI 217
Y D LPYF+K+E N Y + + ++ N L + VEAG + GY D+
Sbjct: 120 AYLDCLPYFRKAETRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTDDL 179
Query: 218 NGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYG 276
NG +Q GF T+ RG R STA+ +L R R NL I A +IL + K+A G
Sbjct: 180 NGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILF--SGKRATG 237
Query: 277 VQFIRHGIKQTVLARREEL 295
V F+ + T ARRE L
Sbjct: 238 VTFLHGSARVTAHARREVL 256
>sp|Q62CH8|BETA_BURMA Choline dehydrogenase OS=Burkholderia mallei (strain ATCC 23344)
GN=betA PE=3 SV=1
Length = 565
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 144/259 (55%), Gaps = 24/259 (9%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPSLAAW-LQLSKF 110
RE+D+I+ G GSAG V+A+RL+E ++LLLEAG PD + T +P+ A+ LQ ++
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWES-LGNPGW 169
+W Y+T+P N R RGK LGGSS++N M Y+RGN DYD+W + G W
Sbjct: 64 NWAYETDPEPH----MNHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHKGLEDW 119
Query: 170 GYDDVLPYFKKSEDNR---NPYLAKNRSLKLS------NGLHD--VEAGQELGY-ENRDI 217
Y D LPYF+K+E N Y + + ++ N L + VEAG + GY D+
Sbjct: 120 AYLDCLPYFRKAETRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTDDL 179
Query: 218 NGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYG 276
NG +Q GF T+ RG R STA+ +L R R NL I A +IL + K+A G
Sbjct: 180 NGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILF--SGKRATG 237
Query: 277 VQFIRHGIKQTVLARREEL 295
V F+ + T ARRE L
Sbjct: 238 VTFLHGSARVTAHARREVL 256
>sp|A9AMZ9|BETA_BURM1 Choline dehydrogenase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=betA PE=3 SV=1
Length = 566
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 24/259 (9%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEA-GPDE--NEVTDVPSLAAW-LQLSKF 110
REYD+I+ G GSAG V+A+RL+E + ++LLLEA GPD + T +P+ A+ LQ ++
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWES-LGNPGW 169
+W Y+T+P + R RGK LGGSS++N M Y+RGN DYD+W + G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHQGLENW 119
Query: 170 GYDDVLPYFKKSEDNR---NPYLAKNRSLKLS------NGLHD--VEAGQELGY-ENRDI 217
Y D LPYFKK+E N Y + + ++ N L + VEAG + GY D+
Sbjct: 120 TYLDCLPYFKKAETRDIGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTEDL 179
Query: 218 NGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYG 276
NG +Q GF T+ +G R STA+ +L + R NL I A +IL + K+A G
Sbjct: 180 NGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILFD--GKRASG 237
Query: 277 VQFIRHGIKQTVLARREEL 295
V ++R + T ARRE L
Sbjct: 238 VTYLRGNERATAHARREVL 256
>sp|Q2T6D0|BETA_BURTA Choline dehydrogenase OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=betA PE=3 SV=1
Length = 565
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 144/259 (55%), Gaps = 24/259 (9%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPSLAAW-LQLSKF 110
RE+D+I+ G GSAG V+A+RL+E ++LLLEAG PD + T +P+ A+ LQ ++
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWES-LGNPGW 169
+W Y+T+P N R RGK LGGSS++N M Y+RGN DYD+W + G W
Sbjct: 64 NWAYETDPEPH----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLEDW 119
Query: 170 GYDDVLPYFKKSEDNR---NPYLAKNRSLKLS------NGLHD--VEAGQELGY-ENRDI 217
Y D LPYF+K+E N Y + + ++ N L + VEAG + GY D+
Sbjct: 120 TYLDCLPYFRKAETRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRTDDL 179
Query: 218 NGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYG 276
NG +Q GF T+ RG R STA+ +L R R NL I A +IL + K+A G
Sbjct: 180 NGYQQEGFGPMDRTVTPRGRRASTARGYLDQARARPNLEIVTHALADRILF--SGKRATG 237
Query: 277 VQFIRHGIKQTVLARREEL 295
V F+ + T ARRE L
Sbjct: 238 VTFLHGSARVTAHARREVL 256
>sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3
SV=1
Length = 552
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 129/247 (52%), Gaps = 22/247 (8%)
Query: 57 YDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP-DENEVTDVPSLAAWLQLSK-FDWQY 114
YD+I++G GSAG V+A+RLS + LLEAGP D N + +P A L SK +W +
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAF 61
Query: 115 KTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDDV 174
+T P N+ WPRGK LGGSS +N M+Y+RG+ DY WE G WG+
Sbjct: 62 QTAPQQH----LNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRA 117
Query: 175 LPYFKKSEDN----RNPYLAKNRSLKLSNGLHD--------VEAGQELGYE-NRDINGEK 221
FKK E N ++ Y + L +S+ L D V+AG E N D NG
Sbjct: 118 FALFKKLEHNQRFDKSNYHGTDGELAVSD-LKDLNPLSKSFVQAGMEAKISFNGDFNGAH 176
Query: 222 QTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIR 281
Q G Q T + G R S+A+AFL V R NL I AH TK+L +KA GV +I+
Sbjct: 177 QEGVGFYQVTQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFE--DRKAVGVSYIQ 234
Query: 282 HGIKQTV 288
+ Q V
Sbjct: 235 KNMHQQV 241
>sp|Q39A44|BETA_BURS3 Choline dehydrogenase OS=Burkholderia sp. (strain 383) GN=betA PE=3
SV=1
Length = 566
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 145/259 (55%), Gaps = 24/259 (9%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAG-PDE--NEVTDVPSLAAW-LQLSKF 110
REYD+I+ G GSAG V+A+RL+E ++LLLEAG PD + T +P+ A+ LQ ++
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWES-LGNPGW 169
+W Y+T+P + R RGK LGGSS++N M Y+RGN DYD+W + G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 170 GYDDVLPYFKKSEDNR---NPYLAKNRSLKLS------NGLHD--VEAGQELGY-ENRDI 217
Y D LPYFKK+E N Y N + ++ N L + V+AG + GY D+
Sbjct: 120 TYLDCLPYFKKAETRDVGPNDYHGGNGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDL 179
Query: 218 NGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYG 276
NG +Q GF T+ +G R STA+ +L + R NL I A +IL + K+A G
Sbjct: 180 NGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKRASG 237
Query: 277 VQFIRHGIKQTVLARREEL 295
V ++R + T ARRE L
Sbjct: 238 VTYLRGSERATAHARREVL 256
>sp|Q0B711|BETA_BURCM Choline dehydrogenase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=betA PE=3 SV=1
Length = 566
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 146/259 (56%), Gaps = 24/259 (9%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEA-GPDE--NEVTDVPSLAAW-LQLSKF 110
REYD+I+ G GSAG V+A+RL+E + ++LLLEA GPD + T +P+ A+ LQ ++
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRY 63
Query: 111 DWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWES-LGNPGW 169
+W Y+T+P + R RGK LGGSS++N M Y+RGN DYD+W + G W
Sbjct: 64 NWAYETDPEPH----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENW 119
Query: 170 GYDDVLPYFKKSEDNR---NPYLAKNRSLKLS------NGLHD--VEAGQELGY-ENRDI 217
Y D LPYFKK+E N Y N + ++ N L + V+AG + GY D+
Sbjct: 120 TYLDCLPYFKKAETRDVGPNDYHGGNGPVSVTTSKPGANPLFEAMVDAGVQAGYPRTDDL 179
Query: 218 NGEKQTGFMVAQGTIR-RGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYG 276
NG +Q GF T+ +G R STA+ +L + R NL I A +IL + K+A G
Sbjct: 180 NGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRPNLEIVTHALADRILFD--GKRASG 237
Query: 277 VQFIRHGIKQTVLARREEL 295
V ++R + + ARRE L
Sbjct: 238 VTYLRGSERASAHARREVL 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,731,234
Number of Sequences: 539616
Number of extensions: 5410178
Number of successful extensions: 14277
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 13669
Number of HSP's gapped (non-prelim): 171
length of query: 310
length of database: 191,569,459
effective HSP length: 117
effective length of query: 193
effective length of database: 128,434,387
effective search space: 24787836691
effective search space used: 24787836691
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)