RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17311
(310 letters)
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 155 bits (391), Expect = 5e-45
Identities = 23/281 (8%), Positives = 61/281 (21%), Gaps = 33/281 (11%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTDVPSLAAWLQLSKFDWQYK 115
+YD +++G G G A L A + + + + G ++ + ++ K ++
Sbjct: 4 KYDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFV 62
Query: 116 TEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYD--------HWESLGNP 167
G+ + + N +G
Sbjct: 63 NVIQGQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGM 122
Query: 168 GWGYDDVLPYFKKSEDNRNP--------------YLAKNRSLKLSNGLHDVEAGQELGYE 213
+ P F + + Y + L
Sbjct: 123 STHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKAESYFQTGTDQFKESIRHNLVLN 182
Query: 214 NRDINGEKQTGF----MVAQGTIRRGSRCSTAKAFLR------PVRKRKNLHIAMRAHVT 263
+ Q F + A S+A + ++
Sbjct: 183 KLAEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACE 242
Query: 264 KILVNPATKKAYGVQFIRHGIKQTVLARREELEVISFRTTT 304
+++ N + + + + + +
Sbjct: 243 RVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHN 283
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 145 bits (365), Expect = 4e-41
Identities = 68/272 (25%), Positives = 111/272 (40%), Gaps = 39/272 (14%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP---DENEVTDVPSLAAWLQLSKFD 111
+ YD+I+ GGG G VA++L+E +L++E G ++ + + P+ + + D
Sbjct: 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVD 82
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWES-LGNPGWG 170
Y T P N + GK LGGS+++N + R ++ D WE G GW
Sbjct: 83 QNYLTVP------LINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWN 136
Query: 171 YDDVLPYFKKSEDNRNPYLAK-------NRSLKLSNGLHDVE-----------------A 206
+D++ Y KK+E R P A+ N + +NG
Sbjct: 137 WDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNT 196
Query: 207 GQELG--YENRDINGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTK 264
LG + + G + M+ R A+A+L P +R NL I V K
Sbjct: 197 VSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGK 256
Query: 265 ILV--NPATKKAYGVQFIRH-GIKQTVLARRE 293
+L + +A GV F + + V A+ E
Sbjct: 257 VLFKQTASGPQAVGVNFGTNKAVNFDVFAKHE 288
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 136 bits (343), Expect = 5e-38
Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 38/272 (13%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP---DENEVTDVPSLAAWLQLSKFD 111
R D+I+ GGG G A+RL+E + S+L++E+G D + + + + S D
Sbjct: 16 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVD 75
Query: 112 WQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGN-PGWG 170
Y+T N G LGGS+++N + R ++ D WE++ GW
Sbjct: 76 HAYETVELAT-----NNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWN 130
Query: 171 YDDVLPYFKKSEDNRNPYLAKNRSLKLSNGLHD------------------------VEA 206
+D+V Y ++E R P + + N + A
Sbjct: 131 WDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSPIVKALMSA 190
Query: 207 GQELGY-ENRDINGEKQTGFMVAQGTIRRGSR-CSTAKAFLRPVRKRKNLHIAMRAHVTK 264
++ G +D G + T+ A+ +L P +R NL + +V K
Sbjct: 191 VEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGK 250
Query: 265 ILV--NPATKKAYGVQFIRH-GIKQTVLARRE 293
+L+ N T +A GV+F H G V A+ E
Sbjct: 251 VLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHE 282
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 132 bits (333), Expect = 1e-36
Identities = 43/272 (15%), Positives = 72/272 (26%), Gaps = 37/272 (13%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTDVPSL-------------- 101
+VIG G GAV A RL++ A ++E G + +
Sbjct: 7 RVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMWL 65
Query: 102 -----AAWLQLSKFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRF 156
F + +G+ +GG S++N + V R
Sbjct: 66 ADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRN 125
Query: 157 DYDHWESLGNPGWGYDDVLPYFKKSEDNRNPYLAKNRSLKLSNGLHD-VEAGQELGYE-- 213
++ + Y+ P N A S + + Q G+
Sbjct: 126 YFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAWFESTEWYKFARTGRKTAQRSGFTTA 185
Query: 214 ----NRDINGEKQT--------GFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAH 261
D K+ G + S K +L L I
Sbjct: 186 FVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAGKKSLDKTYLAQAAATGKLTITTLHR 245
Query: 262 VTKILVNPATKKAYGVQFIRHGIKQTVLARRE 293
VTK+ Y V + + V+A +
Sbjct: 246 VTKVAPAT--GSGYSVTMEQIDEQGNVVATKV 275
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 121 bits (304), Expect = 1e-32
Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 22/266 (8%)
Query: 34 SYYNYDMYDPENRPIDQQQLHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDEN 93
SY ++ YD + ++ YD++++GGG++G +A+ LSE + +L+LE G
Sbjct: 10 SYLSF-AYDATDLELEG-----SYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPT 61
Query: 94 EVTDVPSLAAWLQLSKFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRG 153
+V + ++ + + KT ++ RG+VLGG+S++N +Y R
Sbjct: 62 AYPNVLTADGFVYNLQQEDDGKTPV----ERFVSEDGIDNVRGRVLGGTSIINAGVYARA 117
Query: 154 NRFDYDHWESLGNPGWGYDDVLPYFKKSEDNRNPYLAKNRSLKLSNGLHDVEAGQELGYE 213
N Y W D V ++ ED Y ++S + +EAG
Sbjct: 118 NTSIYSAS----GVDWDMDLVNQTYEWVEDTI-VYKPNSQSWQSVTKTAFLEAGVH---P 169
Query: 214 NRDINGEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATK- 272
N + + + G + T A L NL + + A V KI+ + A
Sbjct: 170 NHGFSLDHEEGTRITGSTFDNKGTRHAADELLNK-GNSNNLRVGVHASVEKIIFSNAPGL 228
Query: 273 KAYGVQFIRHGIKQTVLARREELEVI 298
A GV + R + EVI
Sbjct: 229 TATGVIYRDSNGTPHQAFVRSKGEVI 254
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 114 bits (285), Expect = 8e-30
Identities = 42/284 (14%), Positives = 72/284 (25%), Gaps = 50/284 (17%)
Query: 57 YDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTDVPSLAA------------- 103
+VIG G AV A RL E A L+LE G N+ ++
Sbjct: 3 VPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFK 61
Query: 104 -----------WLQLSKFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVR 152
WL + + N + S G+ +GG S++N + V
Sbjct: 62 NRTEAPLGSFLWLDVVNRNIDPYAGV----LDRVNYDQMSVYVGRGVGGGSLVNGGMAVE 117
Query: 153 GNRFDYDHWESLGNPGWGYDDVLPYFKKSEDNRNPYLAKNRSLKLSNGL----------- 201
R ++ + YF ++ + + +
Sbjct: 118 PKRSYFEEIL---PRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDTEWYKFARVSREQAG 174
Query: 202 ------HDVEAGQELGYENRDIN-GEKQTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNL 254
V + GY R+ ++ + S K +L +
Sbjct: 175 KAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKV 234
Query: 255 HIAMRAHVTKILVNPATKKAYGVQFIRHGIKQTVLARREELEVI 298
I V I A V+ K +
Sbjct: 235 TIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLF 278
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 106 bits (264), Expect = 6e-27
Identities = 49/256 (19%), Positives = 77/256 (30%), Gaps = 28/256 (10%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTDVPSLAAWLQLS------- 108
YD+I++G G G + A RLSE A +LLLE G + T +A W S
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDI 60
Query: 109 -KFDWQYKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNP 167
T+ + + G ++GG + +N LY N D+
Sbjct: 61 PGLFESLFTDSNP----FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSV---GW 113
Query: 168 GWGYDDVLPYFKKSEDNRNPYLAKNRSLKLSNGLHDVEAGQEL------GYENRDINGEK 221
+ + PY K + + Q L D K
Sbjct: 114 PSSWTNHAPYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQGYNQATINDNPNYK 173
Query: 222 QTGFMVAQGTIRRGSRCSTAKAFLRPVRKRKNLHIAMRAHVTKILVNPATKKAYGVQFIR 281
F + G R +L+ R N V+ ++ N + GVQ
Sbjct: 174 DHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRN--GSQILGVQTND 231
Query: 282 HGIKQ----TVLARRE 293
+ V +
Sbjct: 232 PTLGPNGFIPVTPKGR 247
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 43.3 bits (100), Expect = 2e-05
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
EYD IV+G G +++ +S +L ++ P
Sbjct: 6 EYDVIVLGTGLTECILSGIMSV-NGKKVLHMDRNP 39
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4
{Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 42.9 bits (100), Expect = 2e-05
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 45 NRPIDQQQLHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
R + + E D +V+G GSAG A +S+ + + ++E
Sbjct: 22 RRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 67
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 297
Score = 41.7 bits (96), Expect = 5e-05
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
+YD IV+G G +++ LS +L ++
Sbjct: 5 DYDVIVLGTGITECILSGLLSV-DGKKVLHIDKQD 38
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 41.3 bits (95), Expect = 7e-05
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
R Y+ +VIGGG G+ +A L++ + + L E+G
Sbjct: 3 RHYEAVVIGGGIIGSAIAYYLAK-ENKNTALFESGT 37
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 40.7 bits (94), Expect = 9e-05
Identities = 10/83 (12%), Positives = 21/83 (25%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTDVPSLAAWLQLSKFDWQY 114
R YD +VIG GS G + + + +++ + + +
Sbjct: 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKL 61
Query: 115 KTEPTGRACLGYNQGRCSWPRGK 137
W +
Sbjct: 62 MVTGANYMDTIRESAGFGWELDR 84
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 40.4 bits (93), Expect = 2e-04
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 54 HREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
H D +V+G G AG A ++ + ++L+E P
Sbjct: 14 HDTVDVVVVGSGGAGFSAAISATD-SGAKVILIEKEP 49
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 39.1 bits (90), Expect = 2e-04
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
+ YD+I IGGGS G +R + L+EA
Sbjct: 1 KHYDYIAIGGGSGGIASINRAAM-YGQKCALIEAKE 35
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 380
Score = 39.8 bits (92), Expect = 3e-04
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 42 DPENRPIDQQQLHREYDFIVIGGGSAGAVVASRLSEVAH-----WSILLLEAGP 90
D ++ ++ E D +++G G AG A+RL ++A + L+E
Sbjct: 18 DKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 71
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 39.3 bits (90), Expect = 3e-04
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 57 YDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
+D IV+G GS G +L++ LL++A
Sbjct: 4 FDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFD 36
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 39.3 bits (90), Expect = 3e-04
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVT 96
+ +D +VIG GS G A + + + +++
Sbjct: 2 KIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPF 43
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 39.0 bits (90), Expect = 4e-04
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 57 YDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
YD+I++G G GAV A+ L + + +L++E
Sbjct: 2 YDYIIVGSGLFGAVCANELKK-LNKKVLVIEKRN 34
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 38.5 bits (88), Expect = 5e-04
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPD 91
YD IVIGGG +G + A +E ++LLL+ G
Sbjct: 2 HYDVIVIGGGPSGLMAAIGAAE-EGANVLLLDKGNK 36
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide
dehydrogenase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 233
Score = 37.9 bits (87), Expect = 7e-04
Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 53 LHREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
+++ +D ++IGGG AG V A + ++ ++ +E
Sbjct: 2 INKSHDVVIIGGGPAGYVAAIKAAQ-LGFNTACVEKRG 38
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 37.7 bits (86), Expect = 0.001
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 57 YDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
YD IVIGGGS G A R + + + L+E
Sbjct: 2 YDLIVIGGGSGGMAAARRAAR-HNAKVALVEKSR 34
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 37.6 bits (86), Expect = 0.001
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPD 91
REYD I IGGG+AG ++ L L+++ P
Sbjct: 41 REYDAIFIGGGAAGRFGSAYLRA-MGGRQLIVDRWPF 76
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide
dehydrogenase {Garden pea (Pisum sativum) [TaxId:
3888]}
Length = 221
Score = 37.1 bits (85), Expect = 0.001
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
E D ++IGGG G V A + ++ + +E
Sbjct: 3 ENDVVIIGGGPGGYVAAIKAAQ-LGFKTTCIEKRG 36
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide
dehydrogenase {Bacillus stearothermophilus [TaxId:
1422]}
Length = 223
Score = 37.1 bits (85), Expect = 0.001
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
E + +V+G G G V A R ++ + ++E G
Sbjct: 3 ETETLVVGAGPGGYVAAIRAAQ-LGQKVTIVEKGN 36
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 37.4 bits (85), Expect = 0.001
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTD 97
++D I+IGGGS G A ++ +++L+ T+
Sbjct: 3 DFDLIIIGGGSGGLAAAKEAAK-FDKKVMVLDFVTPTPLGTN 43
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 37.2 bits (85), Expect = 0.002
Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPD 91
+ + I+IG G+AG A++L++ S+ + + G
Sbjct: 3 QYSENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNGKK 38
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 36.4 bits (83), Expect = 0.002
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
YD++VIGGGS G A R +E ++E+
Sbjct: 3 SYDYLVIGGGSGGLASARRAAE-LGARAAVVESHK 36
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide
dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 36.6 bits (83), Expect = 0.002
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPD 91
+++D IVIG G G V A + ++ L+E
Sbjct: 2 QKFDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKYKG 37
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 36.1 bits (82), Expect = 0.002
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
+ ++IGGG G V A R + +L+E
Sbjct: 5 QTTLLIIGGGPGGYVAAIRAGQ-LGIPTVLVEGQA 38
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 36.4 bits (83), Expect = 0.002
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
EYD +V+GGG G A ++ + ++E
Sbjct: 6 EYDVVVLGGGPGGYSAAFAAAD-EGLKVAIVERYK 39
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 36.5 bits (83), Expect = 0.003
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
+V+G GSAG + + A +++L++ P
Sbjct: 18 ETTQVLVVGAGSAGFNASLAAKK-AGANVILVDKAP 52
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 36.5 bits (83), Expect = 0.003
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
D ++IG G AG A + A ++LLE P
Sbjct: 23 TTDVVIIGSGGAGLAAAVSARD-AGAKVILLEKEP 56
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 35.7 bits (81), Expect = 0.005
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 54 HREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
D ++IG G+AG +A RL++ +++L GP
Sbjct: 5 EHSCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGP 39
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 35.5 bits (80), Expect = 0.006
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 57 YDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
++IG G G +A L +I +L+ GP
Sbjct: 2 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 35
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 35.3 bits (80), Expect = 0.007
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 37 NYDMYDPENRPIDQQQLHREYDFIVIGGGSAG---AVVASRLSEVAHWSILLLEAGP 90
Y++Y + P + E D ++IGGG +G A A+ +++ + L+E
Sbjct: 6 KYELYKADEVPTEVV----ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAA 58
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 35.1 bits (79), Expect = 0.007
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
D +VIGGG AG A + S ++L P
Sbjct: 5 YCDSLVIGGGLAGLRAAVATQQ-KGLSTIVLSLIP 38
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 34.8 bits (79), Expect = 0.010
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
RE+D +VIG G AG A ++S+ + + LL
Sbjct: 6 REFDAVVIGAGGAGMRAALQISQ-SGQTCALLSKVF 40
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 311
Score = 34.5 bits (78), Expect = 0.012
Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 44 ENRPIDQQQLHREYDFIVIGGGSAGAVVASRLSEV-AHWSILLLEAGP 90
+R D I++G GS+G A +++ + ++E+
Sbjct: 38 TSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 85
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 34.2 bits (77), Expect = 0.015
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 56 EYDFIVIGGGSAGAVVASRLSE-VAHWSILLLEAGP 90
+ D ++G G AG A ++ + I L+
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 34.2 bits (76), Expect = 0.019
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 58 DFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
IV+G G +G A RLSE +L+LEA
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 33.6 bits (75), Expect = 0.029
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 58 DFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
+ V+GGG +G VA L +LLE+
Sbjct: 2 NVAVVGGGISGLAVAHHLRS-RGTDAVLLESSA 33
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 33.5 bits (75), Expect = 0.030
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 58 DFIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
D +V+GGG +G A L + + ++++LEA
Sbjct: 1 DVVVVGGGISGMAAAKLLHD-SGLNVVVLEARD 32
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 32.5 bits (73), Expect = 0.050
Identities = 7/32 (21%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 59 FIVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
+++G G +GAV+ +L+E + +++
Sbjct: 5 ILIVGAGFSGAVIGRQLAE-KGHQVHIIDQRD 35
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 32.5 bits (73), Expect = 0.059
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPD 91
E D +V+G G +G RL E S+ ++E D
Sbjct: 6 EEVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGD 41
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 32.0 bits (71), Expect = 0.072
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 60 IVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
+++G G AG A L+ A + +LEA
Sbjct: 34 VIVGAGMAGLSAAYVLAG-AGHQVTVLEASE 63
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 31.9 bits (72), Expect = 0.077
Identities = 5/22 (22%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 57 YDFIVIGGGSAG---AVVASRL 75
Y +++G G +G A ++
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQK 24
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 31.6 bits (70), Expect = 0.093
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 58 DFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEV 95
D ++ G G G A L + + LLE+ + +
Sbjct: 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPL 40
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 31.3 bits (69), Expect = 0.12
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 60 IVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
VIG G +G A +L ++ + EA
Sbjct: 5 AVIGAGVSGLAAAYKLKI-HGLNVTVFEAEG 34
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 31.2 bits (69), Expect = 0.14
Identities = 18/116 (15%), Positives = 35/116 (30%), Gaps = 9/116 (7%)
Query: 54 HREYDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTDVPSLAAWLQLSKFDWQ 113
H + +V+G G G A L+ +S+ +L DV S + +W
Sbjct: 4 HSQKRVVVLGSGVIGLSSALILAR-KGYSVHILARDL----PEDVSSQTFASPWAGANWT 58
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGW 169
T K + ++++G R + + L +
Sbjct: 59 PFMTLTDGPRQAK----WEESTFKKWVELVPTGHAMWLKGTRRFAQNEDGLLGHWY 110
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 449
Score = 31.1 bits (68), Expect = 0.17
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 60 IVIGGGSAGAVVASRLSEVAHWSILLLEAGP 90
I+IG G +G A +L + LLEA
Sbjct: 9 IIIGSGVSGLAAARQLQS-FGMDVTLLEARD 38
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 30.4 bits (67), Expect = 0.21
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 55 REYDFIVIGGGSAGAVVASRLSEVAH-WSILLLEAGPD 91
F++IGGG+A A + +L++ P+
Sbjct: 3 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 40
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 30.5 bits (67), Expect = 0.24
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 57 YDFIVIGGGSAGAVVASRLSE----VAHWSILLLEAGPDENEV 95
D +++G G AG + A LSE + +++ +
Sbjct: 8 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYN 50
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 30.1 bits (66), Expect = 0.28
Identities = 9/55 (16%), Positives = 20/55 (36%)
Query: 60 IVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTDVPSLAAWLQLSKFDWQY 114
++G G A AS L+ + + I + E ++ L +++
Sbjct: 8 ALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEI 62
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate
hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 29.9 bits (66), Expect = 0.36
Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 57 YDFIVIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTDV 98
+IG G +G ++ L + A ++LE + + +
Sbjct: 3 TQVAIIGAGPSGLLLGQLLHK-AGIDNVILERQTPDYVLGRI 43
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide
reductase subunit F (AhpF), C-terminal domains
{Escherichia coli [TaxId: 562]}
Length = 184
Score = 28.6 bits (62), Expect = 0.68
Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 57 YDFIVIGGGSAG---AVVASRL 75
YD +++G G AG A+ ++R
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARK 23
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 28.7 bits (63), Expect = 0.72
Identities = 12/108 (11%), Positives = 25/108 (23%), Gaps = 4/108 (3%)
Query: 60 IVIGGGSAGAVVASRLSEVAHWSILLLEAG--PDENEVTDVPSLAAWLQLSKFDWQYKTE 117
+VIG G G A + E + S+L + + A + +
Sbjct: 4 VVIGAGVIGLSTALCIHE-RYHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPSNP 62
Query: 118 PTGRACLGYNQGRCSWPRGKVLGGSSV-LNYMLYVRGNRFDYDHWESL 164
S + + +W+ +
Sbjct: 63 QEANWNQQTFNYLLSHIGSPNAANMGLTPVSGYNLFREAVPDPYWKDM 110
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide
dehydrogenase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 233
Score = 28.1 bits (61), Expect = 1.1
Identities = 6/33 (18%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 60 IVIGGGSAGAVVASRLSEVAH--WSILLLEAGP 90
+++GGG AG A + + +++
Sbjct: 5 VILGGGPAGYEAALVAATSHPETTQVTVIDCDG 37
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel
Kch {Escherichia coli [TaxId: 562]}
Length = 153
Score = 27.5 bits (60), Expect = 1.2
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 54 HREYDFIVIGGGSAGAVVASRLSE 77
HR+ FIV G +L++
Sbjct: 1 HRKDHFIVCGHSILAINTILQLNQ 24
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 27.9 bits (61), Expect = 1.2
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Query: 55 REYDFIVIGGGSAG---AVVASRLSEVAHWSILLLEAGPDENEVTDVPSLAAW 104
+ +++G G AG AV A+R A+ +L+ ++T + W
Sbjct: 4 KHSKLLILGSGPAGYTAAVYAAR----ANLQPVLITGMEKGGQLTTTTEVENW 52
>d2axtz1 f.17.5.1 (Z:1-62) Photosystem II reaction center protein
Z, PsbZ {Thermosynechococcus elongatus [TaxId: 146786]}
Length = 62
Score = 25.8 bits (57), Expect = 1.4
Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 16/48 (33%)
Query: 2 IFALIAFGTILKTGLTIV----------------GTGIWLVPVLIAGL 33
+ AL+ ++ G+ + G+G+W+ VL+ G+
Sbjct: 9 LAALVILSFVMVIGVPVAYASPQDWDRSKQLIFLGSGLWIALVLVVGV 56
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 27.8 bits (60), Expect = 1.4
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 60 IVIGGGSAGAVVASRLSEVAHWSILLLEAGPD 91
V+GG +G A L + A + + E P
Sbjct: 8 AVVGGSISGLTAALMLRD-AGVDVDVYERSPQ 38
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId:
1423]}
Length = 134
Score = 26.8 bits (58), Expect = 2.1
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 59 FIVIGGGSAGAVVASRLSE 77
F VIG G G + L
Sbjct: 3 FAVIGLGRFGGSIVKELHR 21
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 27.1 bits (58), Expect = 2.3
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 60 IVIGGGSAGAVVASRLSEVAH-WSILLLEAGP 90
+V+GGG+ GA A + + L+E
Sbjct: 6 VVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 26.7 bits (57), Expect = 2.8
Identities = 8/32 (25%), Positives = 10/32 (31%), Gaps = 1/32 (3%)
Query: 60 IVIGGGSAGAVVASRLSEV-AHWSILLLEAGP 90
IV+G G L + I E G
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35
>d2e2dc1 b.40.3.1 (C:1001-1180) TIMP-2 {Cow (Bos taurus) [TaxId:
9913]}
Length = 180
Score = 26.5 bits (58), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 122 ACLGYNQGRCSWPRG 136
AC+ + G C+W RG
Sbjct: 166 ACIKRSDGSCAWYRG 180
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 26.9 bits (58), Expect = 3.8
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 60 IVIGGGSAGAVVASRLS-EVAHWSILLLEAGPD 91
+IG G +G V A L E A + L E
Sbjct: 8 AIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 26.0 bits (56), Expect = 5.3
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 7/39 (17%)
Query: 55 REYDFIVIGGGSAG---AVVASRLSEVAHWSILLLEAGP 90
++G G A A+ A+R A LL E
Sbjct: 4 HNTRLCIVGSGPAAHTAAIYAAR----AELKPLLFEGWM 38
>d2g5gx1 c.150.1.1 (X:9-263) Heme transport protein ChaN
{Campylobacter jejuni [TaxId: 197]}
Length = 255
Score = 25.7 bits (56), Expect = 7.3
Identities = 5/36 (13%), Positives = 13/36 (36%), Gaps = 4/36 (11%)
Query: 157 DYDHWESLGNPGWGYDDVLPYFKKSEDNRNPYLAKN 192
+ +W+ W + D + +++ L N
Sbjct: 99 NALNWDK----VWKWKDYEQFVNVVFYSKSKILGAN 130
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3
{Escherichia coli [TaxId: 562]}
Length = 424
Score = 25.7 bits (56), Expect = 7.8
Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Query: 114 YKTEPTGRACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHWESLGNPGWGYDD 173
Y+ P +G P + S ++ L+V E +D
Sbjct: 303 YQIIPYAGGTHPVAKGAQFAPDEWIYHRLSFMDKQLWVTRYHPGERFPEGKYPNRSTHDT 362
Query: 174 VLPYFKKSEDNRN 186
L + S+DN +
Sbjct: 363 GLGQY--SKDNES 373
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 25.0 bits (53), Expect = 10.0
Identities = 9/101 (8%), Positives = 31/101 (30%), Gaps = 1/101 (0%)
Query: 61 VIGGGSAGAVVASRLSEVAHWSILLLEAGPDENEVTDVPSLAAWLQLSKFDWQYKTEPTG 120
++G G+ G+ ++ L + + + + D + + + +L +
Sbjct: 5 ILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPE 63
Query: 121 RACLGYNQGRCSWPRGKVLGGSSVLNYMLYVRGNRFDYDHW 161
+ G V++ +L +++
Sbjct: 64 QLEKCLENAEVVLLGVSTDGVLPVMSRILPYLKDQYIVLIS 104
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.423
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,219,525
Number of extensions: 57422
Number of successful extensions: 241
Number of sequences better than 10.0: 1
Number of HSP's gapped: 217
Number of HSP's successfully gapped: 79
Length of query: 310
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 225
Effective length of database: 1,240,546
Effective search space: 279122850
Effective search space used: 279122850
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)